RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8112
(687 letters)
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 338 bits (869), Expect = e-113
Identities = 166/222 (74%), Positives = 194/222 (87%), Gaps = 1/222 (0%)
Query: 454 KSECTYCHPPGKEIYRCGNISIYEVDGSFHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFY 513
+C + PPGKEIYR NIS++EVDG HK+YCQNLCLLAKLFLDHKTLYFDV+PF+FY
Sbjct: 51 LGQCQWRQPPGKEIYRKSNISVHEVDGKDHKIYCQNLCLLAKLFLDHKTLYFDVEPFVFY 110
Query: 514 ILCVIDKYGAHLVGYFSKEKESPDGNNVACILTLPPYQRQGYGKFLISFSYELSKVEGLI 573
IL +D+ GAH+VGYFSKEKESPDGNNVACILTLPPYQR+GYGKFLI+FSYELSK+E +
Sbjct: 111 ILTEVDRQGAHIVGYFSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTV 170
Query: 574 GSPEKPLSDLGKLSYRSYWSWVLLGILRNSKGNSTTIKELSEMTSIAQTDIISTLQAMNM 633
GSPEKPLSDLGKLSYRSYWSWVLL LR+ +G + +IK+LS+MTSI Q DIISTLQ++NM
Sbjct: 171 GSPEKPLSDLGKLSYRSYWSWVLLENLRDFRG-TLSIKDLSQMTSITQNDIISTLQSLNM 229
Query: 634 VKYWKGQHVICVTPKIVEEHIQSTQYKRPRLQVDPTYLRWTP 675
VKYWKGQHVICVTPK+VEEH++S QYK+P + VD L+W P
Sbjct: 230 VKYWKGQHVICVTPKLVEEHLKSAQYKKPPITVDSVCLKWAP 271
Score = 326 bits (837), Expect = e-108
Identities = 150/199 (75%), Positives = 175/199 (87%)
Query: 107 KYIDKIMIGKCEIDTWYFSPYPDECKKKPKLWICEFCLKYMTMERTYRYHKSECTYCHPP 166
KY+DKI IG EID WYFSP+P++ K+PKLW+CE+CLKYM E++YR+H +C + PP
Sbjct: 1 KYVDKIHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPP 60
Query: 167 GKEIYRCGNISIYEVDGSFHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKYGA 226
GKEIYR NIS++EVDG HK+YCQNLCLLAKLFLDHKTLYFDV+PF+FYIL +D+ GA
Sbjct: 61 GKEIYRKSNISVHEVDGKDHKIYCQNLCLLAKLFLDHKTLYFDVEPFVFYILTEVDRQGA 120
Query: 227 HLVGYFSKEKESPDGNNVACILTLPPYQRQGYGKFLISFSYELSKVEGLIGSPEKPLSDL 286
H+VGYFSKEKESPDGNNVACILTLPPYQR+GYGKFLI+FSYELSK+E +GSPEKPLSDL
Sbjct: 121 HIVGYFSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDL 180
Query: 287 GKLSYRSYWSWVLLGILRN 305
GKLSYRSYWSWVLL LR+
Sbjct: 181 GKLSYRSYWSWVLLENLRD 199
Score = 159 bits (405), Expect = 5e-45
Identities = 74/131 (56%), Positives = 91/131 (69%), Gaps = 23/131 (17%)
Query: 324 FPIECKKKPKLWICEFCLKYMTMERTYRYHKSECTYCHPPGKEIYRCGNISIYEVDGSFH 383
FP + K+PKLW+CE+CLKYM E++YR+H +C + PPGKEIYR NIS++EVDG H
Sbjct: 21 FPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIYRKSNISVHEVDGKDH 80
Query: 384 KLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKYDHKTLYFDVDPFLFYILCVIDK 443
K+YCQNLCLLAKLFL DHKTLYFDV+PF+FYIL +D+
Sbjct: 81 KIYCQNLCLLAKLFL-----------------------DHKTLYFDVEPFVFYILTEVDR 117
Query: 444 YGAHLVGYFSK 454
GAH+VGYFSK
Sbjct: 118 QGAHIVGYFSK 128
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 329 bits (846), Expect = e-109
Identities = 124/250 (49%), Positives = 157/250 (62%), Gaps = 8/250 (3%)
Query: 424 KTLYFDVDPFLFYILCVIDKYGAHLVGYFSKSECTYCHPPGKEIYRCGNISIYEVDGSFH 483
LY + F + H+ +C + HPP EIYR NIS++EVDG+
Sbjct: 29 PKLY--LCEFCLKYMKSRTILQQHM------KKCGWFHPPANEIYRKNNISVFEVDGNVS 80
Query: 484 KLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKYGAHLVGYFSKEKESPDGNNVAC 543
+YCQNLCLLAKLFLDHKTLY+DV+PFLFY+L D G HLVGYFSKEK NV+C
Sbjct: 81 TIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKHCQQKYNVSC 140
Query: 544 ILTLPPYQRQGYGKFLISFSYELSKVEGLIGSPEKPLSDLGKLSYRSYWSWVLLGILRNS 603
I+ LP YQR+GYG+FLI FSY LSK EG GSPEKPLSDLG+LSY +YW V+L L +
Sbjct: 141 IMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILECLYHQ 200
Query: 604 KGNSTTIKELSEMTSIAQTDIISTLQAMNMVKYWKGQHVICVTPKIVEEHIQSTQYKRPR 663
+IK+LS++T I DI STL + M+ + Q VI K++++H+ Q
Sbjct: 201 NDKQISIKKLSKLTGICPQDITSTLHHLRMLDFRSDQFVIIRREKLIQDHMAKLQLNLRP 260
Query: 664 LQVDPTYLRW 673
+ VDP LRW
Sbjct: 261 VDVDPECLRW 270
Score = 315 bits (808), Expect = e-103
Identities = 122/201 (60%), Positives = 144/201 (71%)
Query: 107 KYIDKIMIGKCEIDTWYFSPYPDECKKKPKLWICEFCLKYMTMERTYRYHKSECTYCHPP 166
+ I GK EI TWY SPYP E + PKL++CEFCLKYM + H +C + HPP
Sbjct: 1 RCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPP 60
Query: 167 GKEIYRCGNISIYEVDGSFHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKYGA 226
EIYR NIS++EVDG+ +YCQNLCLLAKLFLDHKTLY+DV+PFLFY+L D G
Sbjct: 61 ANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGC 120
Query: 227 HLVGYFSKEKESPDGNNVACILTLPPYQRQGYGKFLISFSYELSKVEGLIGSPEKPLSDL 286
HLVGYFSKEK NV+CI+ LP YQR+GYG+FLI FSY LSK EG GSPEKPLSDL
Sbjct: 121 HLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDL 180
Query: 287 GKLSYRSYWSWVLLGILRNSN 307
G+LSY +YW V+L L + N
Sbjct: 181 GRLSYMAYWKSVILECLYHQN 201
Score = 155 bits (393), Expect = 2e-43
Identities = 66/131 (50%), Positives = 80/131 (61%), Gaps = 23/131 (17%)
Query: 324 FPIECKKKPKLWICEFCLKYMTMERTYRYHKSECTYCHPPGKEIYRCGNISIYEVDGSFH 383
+P E + PKL++CEFCLKYM + H +C + HPP EIYR NIS++EVDG+
Sbjct: 21 YPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVS 80
Query: 384 KLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKYDHKTLYFDVDPFLFYILCVIDK 443
+YCQNLCLLAKLFL DHKTLY+DV+PFLFY+L D
Sbjct: 81 TIYCQNLCLLAKLFL-----------------------DHKTLYYDVEPFLFYVLTQNDV 117
Query: 444 YGAHLVGYFSK 454
G HLVGYFSK
Sbjct: 118 KGCHLVGYFSK 128
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 327 bits (841), Expect = e-108
Identities = 126/223 (56%), Positives = 160/223 (71%), Gaps = 3/223 (1%)
Query: 454 KSECTYCHPPGKEIYRCGNISIYEVDGSFHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFY 513
+ +CT HPPG EIYR +S +E+DG + +C+NLCLL+KLFLDHKTLY+DVDPFLFY
Sbjct: 54 RKKCTLRHPPGNEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHKTLYYDVDPFLFY 113
Query: 514 ILCVIDKYGAHLVGYFSKEKESPDGNNVACILTLPPYQRQGYGKFLISFSYELSKVEGLI 573
+ D+ G HLVGYFSKEKES DG NVACILTLP YQR GYGK LI FSYELSK E +
Sbjct: 114 CMTRRDELGHHLVGYFSKEKESADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENKV 173
Query: 574 GSPEKPLSDLGKLSYRSYWSWVLLGILRNSKGNSTTIKELSEMTSIAQTDIISTLQAMNM 633
GSPEKPLSDLG LSYR+YWS L+ +L + TI E+S MTS+ TDI+ T + +N+
Sbjct: 174 GSPEKPLSDLGLLSYRAYWSDTLITLLVEHQK-EITIDEISSMTSMTTTDILHTAKTLNI 232
Query: 634 VKYWKGQHVICVTPKIVEEHIQSTQYKRPRLQVDPTYLRWTPP 676
++Y+KGQH+I + I++ + + + R +DP L W PP
Sbjct: 233 LRYYKGQHIIFLNEDILDRYNRL--KAKKRRTIDPNRLIWKPP 273
Score = 323 bits (830), Expect = e-107
Identities = 119/203 (58%), Positives = 151/203 (74%)
Query: 105 KVKYIDKIMIGKCEIDTWYFSPYPDECKKKPKLWICEFCLKYMTMERTYRYHKSECTYCH 164
+V+ +++I++GK EI+ WYFSPYP E + ++I +F L+Y ++ Y ++ +CT H
Sbjct: 2 RVRNLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRH 61
Query: 165 PPGKEIYRCGNISIYEVDGSFHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKY 224
PPG EIYR +S +E+DG + +C+NLCLL+KLFLDHKTLY+DVDPFLFY + D+
Sbjct: 62 PPGNEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHKTLYYDVDPFLFYCMTRRDEL 121
Query: 225 GAHLVGYFSKEKESPDGNNVACILTLPPYQRQGYGKFLISFSYELSKVEGLIGSPEKPLS 284
G HLVGYFSKEKES DG NVACILTLP YQR GYGK LI FSYELSK E +GSPEKPLS
Sbjct: 122 GHHLVGYFSKEKESADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENKVGSPEKPLS 181
Query: 285 DLGKLSYRSYWSWVLLGILRNSN 307
DLG LSYR+YWS L+ +L
Sbjct: 182 DLGLLSYRAYWSDTLITLLVEHQ 204
Score = 157 bits (398), Expect = 4e-44
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 23/131 (17%)
Query: 324 FPIECKKKPKLWICEFCLKYMTMERTYRYHKSECTYCHPPGKEIYRCGNISIYEVDGSFH 383
+PIE + ++I +F L+Y ++ Y ++ +CT HPPG EIYR +S +E+DG
Sbjct: 24 YPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRHPPGNEIYRDDYVSFFEIDGRKQ 83
Query: 384 KLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKYDHKTLYFDVDPFLFYILCVIDK 443
+ +C+NLCLL+KLFL DHKTLY+DVDPFLFY + D+
Sbjct: 84 RTWCRNLCLLSKLFL-----------------------DHKTLYYDVDPFLFYCMTRRDE 120
Query: 444 YGAHLVGYFSK 454
G HLVGYFSK
Sbjct: 121 LGHHLVGYFSK 131
>d1wgsa_ b.34.13.3 (A:) Probable histone acetyltransferase MYST1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 133
Score = 138 bits (348), Expect = 6e-39
Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Query: 1 PAEIIQNRYNELENCFEYYVHYDGFNRRLDEWVQKHRIMNSRFDMSEQHWKNKENQAIDL 60
AE+IQ+R N+ E E+YVHY GFNRRLDEWV K+R+ ++ + + KN E +L
Sbjct: 30 SAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLALTK-TVKDAVQKNSEKYLSEL 88
Query: 61 LDQSDRKITRNQKRRHDEINHVQKTYEEMDPTTAALEKE 99
+Q +RKITRNQKR+HDEINHVQKTY EMDPTTAALEKE
Sbjct: 89 AEQPERKITRNQKRKHDEINHVQKTYAEMDPTTAALEKE 127
>d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 315
Score = 106 bits (266), Expect = 7e-26
Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 24/178 (13%)
Query: 462 PPGKEIY----RCGNISIYEVDGS--FHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFYIL 515
+++ +Y+ F + + + + + LF++ Y D + I
Sbjct: 114 DVFEKVSEYSLNGEEFVVYKSSLVDDFARRMHRRVQIFSLLFIEAAN-YIDETDPSWQIY 172
Query: 516 CVIDKYGAHLVGY--------------FSKEKESPDGNNVACILTLPPYQRQGYGKFLIS 561
+++K L+G+ F ++ + ++ L PPYQ +G+G L
Sbjct: 173 WLLNKKTKELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYE 232
Query: 562 FSYE--LSKVEGLIGSPEKPLSDLGKLSYRSYWSWVL-LGILRNSKGNSTTIKELSEM 616
+ L + E P L R+ + LG + +S E E
Sbjct: 233 AIIQSWLEDKSITEITVEDPNEAFDDLRDRNDIQRLRKLGYDAVFQKHSDLSDEFLES 290
Score = 104 bits (262), Expect = 2e-25
Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 23/153 (15%)
Query: 165 PPGKEIY----RCGNISIYEVDGS--FHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFYIL 218
+++ +Y+ F + + + + + LF++ Y D + I
Sbjct: 114 DVFEKVSEYSLNGEEFVVYKSSLVDDFARRMHRRVQIFSLLFIEAAN-YIDETDPSWQIY 172
Query: 219 CVIDKYGAHLVGY--------------FSKEKESPDGNNVACILTLPPYQRQGYGKFLIS 264
+++K L+G+ F ++ + ++ L PPYQ +G+G L
Sbjct: 173 WLLNKKTKELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYE 232
Query: 265 FSYE--LSKVEGLIGSPEKPLSDLGKLSYRSYW 295
+ L + E P L R+
Sbjct: 233 AIIQSWLEDKSITEITVEDPNEAFDDLRDRNDI 265
Score = 51.0 bits (122), Expect = 2e-07
Identities = 9/83 (10%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 362 PPGKEIY----RCGNISIYEVDGS--FHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFYIL 415
+++ +Y+ F + + + + + LF++ Y D + I
Sbjct: 114 DVFEKVSEYSLNGEEFVVYKSSLVDDFARRMHRRVQIFSLLFIEAAN-YIDETDPSWQIY 172
Query: 416 CVIDKYDHKTL-YFDVDPFLFYI 437
+++K + + + + Y+
Sbjct: 173 WLLNKKTKELIGFVTTYKYWHYL 195
>d2buda1 b.34.13.3 (A:367-454) Putative histone acetyltransferase
MOF {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 88
Score = 66.1 bits (161), Expect = 4e-14
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 1 PAEIIQNRYNELEN-CFEYYVHYDGFNRRLDEWVQKHRIMNSRFDMSE 47
+++Q+R E EYYVHY G NRRLD WV +HRI ++ D+
Sbjct: 28 RGQVLQSRTTENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNADDLGG 75
>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz
{Human (Homo sapiens) [TaxId: 9606]}
Length = 33
Score = 47.4 bits (113), Expect = 4e-08
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 135 PKLWICEFCLKYMTMERTYRYHKSECTY 162
PKL++CEFCLKYM + H +C +
Sbjct: 5 PKLYLCEFCLKYMKSRTILQQHMKKCGW 32
Score = 47.4 bits (113), Expect = 4e-08
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 332 PKLWICEFCLKYMTMERTYRYHKSECTY 359
PKL++CEFCLKYM + H +C +
Sbjct: 5 PKLYLCEFCLKYMKSRTILQQHMKKCGW 32
>d2f5ka1 b.34.13.3 (A:6-88) Mortality factor 4-like protein 1,
MRG15 {Human (Homo sapiens) [TaxId: 9606]}
Length = 83
Score = 39.1 bits (91), Expect = 1e-04
Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 1 PAEIIQNRYNELENCFEYYVHYDGFNRRLDEWVQKHRIM 39
A+ ++ + + +Y++HY G+N+ DEWV + R++
Sbjct: 22 EAKCVKVAIKDKQ--VKYFIHYSGWNKNWDEWVPESRVL 58
>d1ki1b1 a.87.1.1 (B:1229-1438) GEF of intersectin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 210
Score = 32.4 bits (73), Expect = 0.12
Identities = 11/105 (10%), Positives = 34/105 (32%)
Query: 2 AEIIQNRYNELENCFEYYVHYDGFNRRLDEWVQKHRIMNSRFDMSEQHWKNKENQAIDLL 61
+I+ + ++ + + + + E + K +
Sbjct: 88 GDILSAQLPHMQPYIRFCSRQLNGAALIQQKTDEAPDFKEFVKRLEMDPRCKGMPLSSFI 147
Query: 62 DQSDRKITRNQKRRHDEINHVQKTYEEMDPTTAALEKEHEAITKV 106
+ +++TR + + + + + + ALEK E ++V
Sbjct: 148 LKPMQRVTRYPLIIKNILENTPENHPDHSHLKHALEKAEELCSQV 192
>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 308
Score = 31.6 bits (70), Expect = 0.31
Identities = 17/158 (10%), Positives = 35/158 (22%), Gaps = 9/158 (5%)
Query: 120 DTWYFSPYPDECKKKPKLWICEFCLKYMTMERTYRYHKSECTYCHPPGKEIYRCGNISIY 179
+ + + + ++
Sbjct: 112 TLDPARATASALGLVGVRELIQMRRPLR-DIPEPTIPDGVVIRTYAGTSDDAELLRVNNA 170
Query: 180 EVDGSFHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKYGAHLVGYFSKEKESP 239
G + + L + +FD D + + L+G+ K P
Sbjct: 171 AFAGHPEQGGWTAVQLAERR----GEAWFDPDGLILAFGDSPRERPGRLLGFHW-TKVHP 225
Query: 240 DGNNVACIL---TLPPYQRQGYGKFLISFSYELSKVEG 274
D + + P QR+G G+ L S
Sbjct: 226 DHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRL 263
Score = 31.2 bits (69), Expect = 0.34
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Query: 504 YFDVDPFLFYILCVIDKYGAHLVGYFSKEKESPDGNNVACIL---TLPPYQRQGYGKFLI 560
+FD D + + L+G+ K PD + + P QR+G G+ L
Sbjct: 194 WFDPDGLILAFGDSPRERPGRLLGFHW-TKVHPDHPGLGEVYVLGVDPAAQRRGLGQMLT 252
Query: 561 SFSYELSKVEG 571
S
Sbjct: 253 SIGIVSLARRL 263
>d2o34a1 d.96.2.2 (A:1-248) Hypothetical protein DVU1097
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 248
Score = 27.9 bits (62), Expect = 3.8
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 70 RNQKRRHDEINHVQKTYEEMDPTTAALEKEHEAI 103
RN+ R + Q EE D AL + +
Sbjct: 15 RNRCARREGETVFQVVVEETDLRVTALAELATPM 48
>d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus
[TaxId: 4844]}
Length = 265
Score = 27.5 bits (60), Expect = 5.7
Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 10/122 (8%)
Query: 390 LCLLAKLFLDHKTLYFDVDPFLFYILCV--IDKYDHKTLYFDVDPFLFYILCVIDKYGAH 447
LLA + L + + + + + D
Sbjct: 146 QALLAGMDLYQREPRLSPKNLSIFTVGGPRVGNPTFAYYVESTGIPFQRTVHKRD----- 200
Query: 448 LVGYFSKSECTYCHPPGKEIYRCGNISIYEV-DGSFHKLYCQNLCLLAKLFLDHKTLYFD 506
+V + + H PG E + S ++ C N + LDH + YFD
Sbjct: 201 IVPHVPPQSFGFLH-PGVESWIKSGTSNVQICTSEIETKDCSNSIVPFTSILDHLS-YFD 258
Query: 507 VD 508
++
Sbjct: 259 IN 260
>d3lyna_ a.19.1.1 (A:) Lysin {Green abalone (Haliotis fulgens)
[TaxId: 6456]}
Length = 122
Score = 26.3 bits (58), Expect = 6.9
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 14/64 (21%)
Query: 24 GFNRRLDEWVQKH------------RIMNSRFDMSEQHWKNKENQAIDLLDQSDRKITRN 71
GF+R+L W++ H +N R+ + HW+N + R
Sbjct: 16 GFDRQLTAWLRVHGRRLTNNQKKTLFFVNRRY--MQTHWQNYMLWVKRKIKALGRPAAVG 73
Query: 72 QKRR 75
R
Sbjct: 74 DYTR 77
>d1by1a_ a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxId: 9606]}
Length = 209
Score = 26.6 bits (58), Expect = 8.0
Identities = 6/95 (6%), Positives = 25/95 (26%)
Query: 12 LENCFEYYVHYDGFNRRLDEWVQKHRIMNSRFDMSEQHWKNKENQAIDLLDQSDRKITRN 71
+ Y+ Y + + +H F ++ L + ++ +
Sbjct: 96 MPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMETKGASSPGILVLTTGLSKPFMRLDKY 155
Query: 72 QKRRHDEINHVQKTYEEMDPTTAALEKEHEAITKV 106
+ H++ + + ++ +
Sbjct: 156 PTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQC 190
>d1xcga1 a.87.1.1 (A:714-941) Rho guanine nucleotide exchange factor
11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 26.7 bits (58), Expect = 8.1
Identities = 14/99 (14%), Positives = 31/99 (31%), Gaps = 4/99 (4%)
Query: 12 LENCFEYYVHY----DGFNRRLDEWVQKHRIMNSRFDMSEQHWKNKENQAIDLLDQSDRK 67
E + + + +K +E H + + Q DL+ ++
Sbjct: 109 REELQQVAAQFCSYQSIALELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQR 168
Query: 68 ITRNQKRRHDEINHVQKTYEEMDPTTAALEKEHEAITKV 106
+T+ I H + E + A ++ E + V
Sbjct: 169 LTKYPLLLESIIKHTEGGTSEHEKLCRARDQCREILKYV 207
>d1iruk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 199
Score = 26.4 bits (57), Expect = 9.3
Identities = 16/175 (9%), Positives = 43/175 (24%), Gaps = 13/175 (7%)
Query: 365 KEIYRCGNISIYEVDGSFHKLYCQNLCLLAKLFLDHKTLYFDVDPFLFYILCVIDKYDHK 424
++++ + G + + + + +
Sbjct: 33 DKMFKMSEKILLLCVGEAG--DTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLAD 90
Query: 425 TLYFDVDPFLFYILCVIDKYGAHLVGYFSKSECTYCHPPGKEIYRCGNISIYEVDGSFHK 484
L + +L D++ + Y P + + +
Sbjct: 91 CLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAP-----FAAHGYGAFLTLSILDR 145
Query: 485 LYCQNLCL-----LAKLFLDHKTLYFDVDPFLFYILCVIDKYGAHLVGYFSKEKE 534
Y + L + L+ + + + +IDK G H + S K+
Sbjct: 146 YYTPTISRERAVELLRKCLEE-LQKRFILNLPTFSVRIIDKNGIHDLDNISFPKQ 199
Score = 26.4 bits (57), Expect = 9.8
Identities = 13/112 (11%), Positives = 26/112 (23%), Gaps = 6/112 (5%)
Query: 131 CKKKPKLWICEFCLKYMTMERTYRYHKSECTYCHPPGKEIYRCGNISIYEVDGSFHKLYC 190
L + Y K + + + Y
Sbjct: 89 ADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYT 148
Query: 191 QNLCL-----LAKLFLDHKTLYFDVDPFLFYILCVIDKYGAHLVGYFSKEKE 237
+ L + L+ + + + +IDK G H + S K+
Sbjct: 149 PTISRERAVELLRKCLEE-LQKRFILNLPTFSVRIIDKNGIHDLDNISFPKQ 199
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.141 0.457
Gapped
Lambda K H
0.267 0.0653 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,839,770
Number of extensions: 144194
Number of successful extensions: 462
Number of sequences better than 10.0: 1
Number of HSP's gapped: 446
Number of HSP's successfully gapped: 41
Length of query: 687
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 595
Effective length of database: 1,144,436
Effective search space: 680939420
Effective search space used: 680939420
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (25.5 bits)