Query psy8114
Match_columns 111
No_of_seqs 23 out of 25
Neff 3.1
Searched_HMMs 29240
Date Fri Aug 16 18:58:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8114.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8114hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yfq_A Padgh, NAD-GDH, NAD-spe 32.8 15 0.0005 30.5 1.2 74 8-98 84-164 (421)
2 3g20_A Type II secretion prote 30.0 1.1E+02 0.0037 21.0 5.1 25 42-66 19-43 (123)
3 4af3_D Incenp, inner centromer 28.3 11 0.00038 24.2 -0.2 24 83-106 40-68 (71)
4 1gtm_A Glutamate dehydrogenase 27.0 27 0.00093 28.6 1.8 74 8-98 82-162 (419)
5 2hi2_A Fimbrial protein; type 26.5 67 0.0023 21.8 3.6 26 42-67 32-57 (158)
6 1v32_A AT5G08430, hypothetical 25.3 1.2E+02 0.0042 20.4 4.7 35 31-65 11-52 (101)
7 3aoe_E Glutamate dehydrogenase 25.0 28 0.00095 28.9 1.6 73 8-97 91-170 (419)
8 3ls0_A SLL1638 protein, PSBQ; 24.7 24 0.00083 25.6 1.0 47 15-64 4-50 (133)
9 1bm8_A Transcription factor MB 24.4 12 0.00042 25.5 -0.6 14 97-110 24-37 (99)
10 3ljm_A Coil Ser L9C; de novo d 24.1 96 0.0033 17.5 3.3 21 40-63 6-26 (31)
11 1bgv_A Glutamate dehydrogenase 23.9 29 0.00098 29.1 1.5 74 7-97 102-182 (449)
12 2p1l_B Beclin 1; apoptosis, au 22.6 18 0.00062 20.3 0.0 7 84-90 24-30 (31)
13 3aog_A Glutamate dehydrogenase 21.6 35 0.0012 28.6 1.5 73 8-97 108-187 (440)
14 3sok_A Fimbrial protein; pilus 21.2 1.1E+02 0.0039 20.9 3.9 26 42-67 32-57 (151)
15 2tmg_A Protein (glutamate dehy 20.1 35 0.0012 28.2 1.2 73 8-97 82-161 (415)
No 1
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=32.77 E-value=15 Score=30.48 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=51.6
Q ss_pred HHHHHHHHHhhhhccCCCC-------CCCcccccCCChHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccchhhhc
Q psy8114 8 VLFLMVTLFMKKSLAMPPL-------QCTPGFVDQIPFKIRKICVALSTIYELSNAMESYIDDNGSMDQFVNPEINQLME 80 (111)
Q Consensus 8 v~~~~~~i~~~~A~AapPp-------~C~p~~lDelpPriRKiC~AL~ni~els~Ame~YIddq~~~~~~~~~~~~~l~d 80 (111)
|+++...+..++|.+.+|- .|.|.-.. +..+.++|. .|.++|..+|... .+.+--|
T Consensus 84 v~~La~~mt~KnAl~~lP~GGgKggi~~dP~~~s--~~el~r~~r------~f~~~l~~~iG~~---------~dvpA~D 146 (421)
T 2yfq_A 84 VKALSLWMTFKGGALGLPYGGGKGGICVDPAELS--ERELEQLSR------GWVRGLYKYLGDR---------IDIPAPD 146 (421)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEEEEEECCGGGSC--HHHHHHHHH------HHHHHHGGGCBTT---------TEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCC--HHHHHHHHH------HHHHHHHHhcCCC---------cEEECCC
Confidence 6788889999999988875 77887655 457788888 4556666666422 1233455
Q ss_pred CCCcccccceeeeecccc
Q psy8114 81 NGVKRQDMDHVFLRYGKI 98 (111)
Q Consensus 81 ~~~KRQDVDHVFLRFGR~ 98 (111)
-|+-=||++.+|-.|.|.
T Consensus 147 vgt~~~~m~~~~~~y~~~ 164 (421)
T 2yfq_A 147 VNTNGQIMSWFVDEYVKL 164 (421)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHh
Confidence 566667888888877664
No 2
>3g20_A Type II secretion protein; general secretory pathway, major pilin, protein transport; HET: NHE; 1.78A {Escherichia coli O157} SCOP: d.24.1.3
Probab=30.04 E-value=1.1e+02 Score=21.00 Aligned_cols=25 Identities=20% Similarity=0.278 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCC
Q psy8114 42 KICVALSTIYELSNAMESYIDDNGS 66 (111)
Q Consensus 42 KiC~AL~ni~els~Ame~YIddq~~ 66 (111)
|.-.|.+++.++.+||+.|--|...
T Consensus 19 k~~~a~a~l~~i~~Ale~Y~ld~g~ 43 (123)
T 3g20_A 19 DRQKVMSDLVALESTLDMYRLDNNR 43 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4456677788999999999999865
No 3
>4af3_D Incenp, inner centromere protein; transferase-inhibitor complex, aurkb; HET: VX6; 2.75A {Homo sapiens}
Probab=28.35 E-value=11 Score=24.24 Aligned_cols=24 Identities=42% Similarity=0.782 Sum_probs=5.8
Q ss_pred Ccccccceee----eeccccCCCC-cccc
Q psy8114 83 VKRQDMDHVF----LRYGKITSDG-WVSP 106 (111)
Q Consensus 83 ~KRQDVDHVF----LRFGR~~~~~-~~~~ 106 (111)
.+-=|++.+| -||=+|||.| |-+|
T Consensus 40 i~p~~LeeIF~~~k~r~~kRtSSA~W~~p 68 (71)
T 4af3_D 40 ILPLDLEDIFKKSKPRYHKRTSSAVWNSP 68 (71)
T ss_dssp CCCCCSTTTCC------------------
T ss_pred CCCCCHHHHhCccccccccCCCcccCCCC
Confidence 3445666666 4787888766 6665
No 4
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=26.99 E-value=27 Score=28.57 Aligned_cols=74 Identities=16% Similarity=0.064 Sum_probs=50.2
Q ss_pred HHHHHHHHHhhhhccCCCC-------CCCcccccCCChHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccchhhhc
Q psy8114 8 VLFLMVTLFMKKSLAMPPL-------QCTPGFVDQIPFKIRKICVALSTIYELSNAMESYIDDNGSMDQFVNPEINQLME 80 (111)
Q Consensus 8 v~~~~~~i~~~~A~AapPp-------~C~p~~lDelpPriRKiC~AL~ni~els~Ame~YIddq~~~~~~~~~~~~~l~d 80 (111)
|+++...+..++|.+.+|- .|.|.-.. +..+.++|. .|.++|..+|... .+.+--|
T Consensus 82 v~~La~~mt~Knal~~lp~GG~Kggi~~dP~~~s--~~e~~~~~r------~f~~~l~~~~g~~---------~dv~a~D 144 (419)
T 1gtm_A 82 VKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLS--DREKERLAR------GYIRAIYDVISPY---------EDIPAPD 144 (419)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSC--HHHHHHHHH------HHHHHHGGGCBTT---------TEECCBC
T ss_pred HHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCC--HHHHHHHHH------HHHHHHHHhcCCC---------cEEeCCC
Confidence 6788889999999998876 77776554 456778887 4556677777421 1233445
Q ss_pred CCCcccccceeeeecccc
Q psy8114 81 NGVKRQDMDHVFLRYGKI 98 (111)
Q Consensus 81 ~~~KRQDVDHVFLRFGR~ 98 (111)
-|+-=||++.+|-.|.|.
T Consensus 145 ~gt~~~~m~~~~~~y~~~ 162 (419)
T 1gtm_A 145 VYTNPQIMAWMMDEYETI 162 (419)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHh
Confidence 566667777777776553
No 5
>2hi2_A Fimbrial protein; type IV pilin, fiber-forming protein, membrane protein, DNA protein, contractIle protein, cell adhesion; HET: MEA GLA DT6 HTO; 2.30A {Neisseria gonorrhoeae} PDB: 2hil_A* 1ay2_A* 2pil_A*
Probab=26.45 E-value=67 Score=21.76 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCCC
Q psy8114 42 KICVALSTIYELSNAMESYIDDNGSM 67 (111)
Q Consensus 42 KiC~AL~ni~els~Ame~YIddq~~~ 67 (111)
|+-.++..+.++..|++.|..+...|
T Consensus 32 ~~~~~~~~~~~~~~a~~~~~~~~g~~ 57 (158)
T 2hi2_A 32 QVSEAILLAEGQKSAVTEYYLNHGKW 57 (158)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHHHSSC
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhhhh
Confidence 45567777788889999999887654
No 6
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=25.28 E-value=1.2e+02 Score=20.43 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=23.3
Q ss_pred ccccCCChHHHHHHHHHHH-------HHHHHHHHHHhHhhcC
Q psy8114 31 GFVDQIPFKIRKICVALST-------IYELSNAMESYIDDNG 65 (111)
Q Consensus 31 ~~lDelpPriRKiC~AL~n-------i~els~Ame~YIddq~ 65 (111)
.+..-++|.+.++...+-+ -.|...+|-+||.+..
T Consensus 11 ~~~~w~S~eLa~fl~~iG~~~~~~~sR~eVvk~lW~YIK~nn 52 (101)
T 1v32_A 11 EFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEG 52 (101)
T ss_dssp SSSSSSCHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred eecccCCHHHHHHHHHcCCCCccccCHHHHHHHHHHHHHhhc
Confidence 3455678888888843222 2356677778999875
No 7
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=25.03 E-value=28 Score=28.88 Aligned_cols=73 Identities=14% Similarity=0.155 Sum_probs=50.9
Q ss_pred HHHHHHHHHhhhhccCCCC-------CCCcccccCCChHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccchhhhc
Q psy8114 8 VLFLMVTLFMKKSLAMPPL-------QCTPGFVDQIPFKIRKICVALSTIYELSNAMESYIDDNGSMDQFVNPEINQLME 80 (111)
Q Consensus 8 v~~~~~~i~~~~A~AapPp-------~C~p~~lDelpPriRKiC~AL~ni~els~Ame~YIddq~~~~~~~~~~~~~l~d 80 (111)
|.++...|..++|.+.+|- .|.|.-.. +..+.++|. .|.++|..+|... .+.+--|
T Consensus 91 v~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s--~~El~r~~r------~f~~~l~~~iGp~---------~dvpA~D 153 (419)
T 3aoe_E 91 TAGLAAWMTLKAAVYDLPFGGAAGGIAVDPKGLS--PQELERLVR------RYTAELVGLIGPD---------SDILGPD 153 (419)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEEECSCGGGSC--HHHHHHHHH------HHHHHHTTTCBTT---------TEEEEEB
T ss_pred HHHHHHHHHHHHHhccCCCCCccEEEecCCCCCC--HHHHHHHHH------HHHHHHHHhcCCC---------CEEECCC
Confidence 6788899999999998875 77887655 457788888 4555666666421 1233455
Q ss_pred CCCcccccceeeeeccc
Q psy8114 81 NGVKRQDMDHVFLRYGK 97 (111)
Q Consensus 81 ~~~KRQDVDHVFLRFGR 97 (111)
-|+-=||++.+|-.|.|
T Consensus 154 vGt~~~~m~~~~~~y~~ 170 (419)
T 3aoe_E 154 LGADQQVMAWIMDTYSM 170 (419)
T ss_dssp TTBCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 56666888888887755
No 8
>3ls0_A SLL1638 protein, PSBQ; photosynthesis, four helix bundle; 1.80A {Synechocystis SP} PDB: 3ls1_A
Probab=24.71 E-value=24 Score=25.57 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=24.2
Q ss_pred HHhhhhccCCCCCCCcccccCCChHHHHHHHHHHHHHHHHHHHHHhHhhc
Q psy8114 15 LFMKKSLAMPPLQCTPGFVDQIPFKIRKICVALSTIYELSNAMESYIDDN 64 (111)
Q Consensus 15 i~~~~A~AapPp~C~p~~lDelpPriRKiC~AL~ni~els~Ame~YIddq 64 (111)
++|+...|..||.=+|..++.+--.++.|=.+=+++.| -+++||+++
T Consensus 4 vsC~~p~a~~pptysp~~i~~Iq~y~~~i~~ar~Rl~e---~L~~lI~~~ 50 (133)
T 3ls0_A 4 GSCSSPQVEIPTTYSPEKIAQLQVYVNPIAVARDGMEK---RLQGLIADQ 50 (133)
T ss_dssp ------------CCCHHHHHHHHHHHHHHHHHHHHHHH---THHHHHHTT
T ss_pred ccCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHhHH---HHHHHhhhc
Confidence 56777667788889998888666666666665555433 267888886
No 9
>1bm8_A Transcription factor MBP1; cell cycle, cyclins, DNA synthesis, helix-turn-helix DNA- binding domain; 1.71A {Saccharomyces cerevisiae} SCOP: d.34.1.1
Probab=24.45 E-value=12 Score=25.52 Aligned_cols=14 Identities=36% Similarity=0.802 Sum_probs=11.5
Q ss_pred ccCCCCcccccccc
Q psy8114 97 KITSDGWVSPVHVY 110 (111)
Q Consensus 97 R~~~~~~~~~~~~~ 110 (111)
||..||||+--|+.
T Consensus 24 RR~~d~~VNaT~il 37 (99)
T 1bm8_A 24 KRKKDDWVNATHIL 37 (99)
T ss_dssp EETTTCCEEHHHHH
T ss_pred EECCCCeEEHHHhh
Confidence 78999999976654
No 10
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=24.15 E-value=96 Score=17.50 Aligned_cols=21 Identities=29% Similarity=0.566 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhh
Q psy8114 40 IRKICVALSTIYELSNAMESYIDD 63 (111)
Q Consensus 40 iRKiC~AL~ni~els~Ame~YIdd 63 (111)
+.|-|+||+.-.| |++.-++.
T Consensus 6 lekkcaalesklq---alekklea 26 (31)
T 3ljm_A 6 LEKKCAALESKLQ---ALEKKLEA 26 (31)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHHHHHHH
Confidence 5688999997776 66655543
No 11
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=23.86 E-value=29 Score=29.15 Aligned_cols=74 Identities=19% Similarity=0.260 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhhhhccCCCC-------CCCcccccCCChHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccchhhh
Q psy8114 7 LVLFLMVTLFMKKSLAMPPL-------QCTPGFVDQIPFKIRKICVALSTIYELSNAMESYIDDNGSMDQFVNPEINQLM 79 (111)
Q Consensus 7 ~v~~~~~~i~~~~A~AapPp-------~C~p~~lDelpPriRKiC~AL~ni~els~Ame~YIddq~~~~~~~~~~~~~l~ 79 (111)
.|+++...+..++|.+.+|- .|.|.-.. +..++++|.+ |.++|-.||.... +.+--
T Consensus 102 ev~~La~~mt~KnAl~~lP~GGgKGGi~~dP~~~s--~~e~~r~~r~------f~~~L~~~ig~~~---------dvpA~ 164 (449)
T 1bgv_A 102 IMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKS--DREVMRFCQA------FMTELYRHIGPDI---------DVPAG 164 (449)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCEEEEEESCCCTTCC--HHHHHHHHHH------HHHHHGGGCBTTT---------EEEEC
T ss_pred HHHHHHHHHHHHHHhhCCCCCCccEEEECCCccCC--HHHHHHHHHH------HHHHhhheeCCCC---------cCCCC
Confidence 47899999999999998886 78886332 2357777773 4555655664321 22344
Q ss_pred cCCCcccccceeeeeccc
Q psy8114 80 ENGVKRQDMDHVFLRYGK 97 (111)
Q Consensus 80 d~~~KRQDVDHVFLRFGR 97 (111)
|-|+-=||++.+|-.|.|
T Consensus 165 DvGt~~~~m~~~~~~y~~ 182 (449)
T 1bgv_A 165 DLGVGAREIGYMYGQYRK 182 (449)
T ss_dssp BTTBCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 555666677777766665
No 12
>2p1l_B Beclin 1; apoptosis, autophagy, BH3 domain, BCL; 2.50A {Homo sapiens} PDB: 3dvu_C 2pon_A
Probab=22.59 E-value=18 Score=20.28 Aligned_cols=7 Identities=43% Similarity=0.828 Sum_probs=0.5
Q ss_pred cccccce
Q psy8114 84 KRQDMDH 90 (111)
Q Consensus 84 KRQDVDH 90 (111)
-|+||||
T Consensus 24 ~~sdIDh 30 (31)
T 2p1l_B 24 GQTDVDH 30 (31)
T ss_dssp C------
T ss_pred CCCcCCC
Confidence 4778887
No 13
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=21.65 E-value=35 Score=28.58 Aligned_cols=73 Identities=11% Similarity=0.170 Sum_probs=50.4
Q ss_pred HHHHHHHHHhhhhccCCCC-------CCCcccccCCChHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccchhhhc
Q psy8114 8 VLFLMVTLFMKKSLAMPPL-------QCTPGFVDQIPFKIRKICVALSTIYELSNAMESYIDDNGSMDQFVNPEINQLME 80 (111)
Q Consensus 8 v~~~~~~i~~~~A~AapPp-------~C~p~~lDelpPriRKiC~AL~ni~els~Ame~YIddq~~~~~~~~~~~~~l~d 80 (111)
|.++...+..++|++.+|- .|.|.-.. +..+.++|. .|.++|..+|... .+.+--|
T Consensus 108 v~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s--~~Eler~~r------~f~~~l~~~iGp~---------~dvpA~D 170 (440)
T 3aog_A 108 VMALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLS--PGELERLTR------RYTSEIGILLGPD---------RDIPAPD 170 (440)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSC--HHHHHHHHH------HHHHHHGGGCBTT---------TEECCBC
T ss_pred HHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCC--HHHHHHHHH------HHHHHHHHhcCCC---------cEEECCC
Confidence 6788889999999988775 77776655 457788888 4556666777421 1233455
Q ss_pred CCCcccccceeeeeccc
Q psy8114 81 NGVKRQDMDHVFLRYGK 97 (111)
Q Consensus 81 ~~~KRQDVDHVFLRFGR 97 (111)
-|+-=||++.+|-.|.|
T Consensus 171 vGt~~~~m~~~~~~y~~ 187 (440)
T 3aog_A 171 VNTGEREMAWMMDTYSM 187 (440)
T ss_dssp TTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 56666777877777755
No 14
>3sok_A Fimbrial protein; pilus subunit, extracellular, cell adhesion; 2.30A {Dichelobacter nodosus}
Probab=21.22 E-value=1.1e+02 Score=20.86 Aligned_cols=26 Identities=8% Similarity=0.082 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCCC
Q psy8114 42 KICVALSTIYELSNAMESYIDDNGSM 67 (111)
Q Consensus 42 KiC~AL~ni~els~Ame~YIddq~~~ 67 (111)
|+=.+.+.+.++..+++.|..+...+
T Consensus 32 ~~~~~~~~~~~~~~a~~~~~~~~g~~ 57 (151)
T 3sok_A 32 QAAEGLTLADGLKVRISDHLESGECK 57 (151)
T ss_dssp HHHHHHHHHHHTHHHHHHHHTTTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45567778888899999999987543
No 15
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=20.11 E-value=35 Score=28.22 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhhhccCCCC-------CCCcccccCCChHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCCccccchhhhc
Q psy8114 8 VLFLMVTLFMKKSLAMPPL-------QCTPGFVDQIPFKIRKICVALSTIYELSNAMESYIDDNGSMDQFVNPEINQLME 80 (111)
Q Consensus 8 v~~~~~~i~~~~A~AapPp-------~C~p~~lDelpPriRKiC~AL~ni~els~Ame~YIddq~~~~~~~~~~~~~l~d 80 (111)
|+++...+..++|.+.+|- .|.|.-.. +..+.++|. .|.++|..+|... .+.+--|
T Consensus 82 v~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s--~~e~~r~~r------~f~~~l~~~ig~~---------~dvpa~D 144 (415)
T 2tmg_A 82 VKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLS--RRELERLSR------RFFREIQVIIGPY---------NDIPAPD 144 (415)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSC--HHHHHHHHH------HHHHHTGGGCBTT---------TEECCBC
T ss_pred HHHHHHHHHHHHHhcCCCCCCcceEEeCCCCCCC--HHHHHHHHH------HHHHHHHHHhCCC---------cEEeCCC
Confidence 6788889999999987776 67776544 346677777 4556666666321 1233445
Q ss_pred CCCcccccceeeeeccc
Q psy8114 81 NGVKRQDMDHVFLRYGK 97 (111)
Q Consensus 81 ~~~KRQDVDHVFLRFGR 97 (111)
-|+-=||++.+|-.|.|
T Consensus 145 ~gt~~~~m~~~~~~y~~ 161 (415)
T 2tmg_A 145 VNTNADVIAWYMDEYEM 161 (415)
T ss_dssp TTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 56666788888777754
Done!