Query psy8116
Match_columns 591
No_of_seqs 474 out of 3346
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 19:01:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8116.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8116hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204|consensus 100.0 2E-113 4E-118 915.3 31.1 493 5-528 529-1025(1034)
2 KOG0202|consensus 100.0 1.3E-84 2.8E-89 695.3 32.4 482 8-512 461-969 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 2.4E-76 5.2E-81 688.2 50.0 469 9-510 469-940 (941)
4 TIGR01116 ATPase-IIA1_Ca sarco 100.0 7.5E-75 1.6E-79 673.3 51.1 477 8-509 418-916 (917)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 1.2E-74 2.7E-79 674.2 50.8 482 8-512 523-1048(1053)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2.6E-74 5.7E-79 673.0 49.7 481 8-511 446-985 (997)
7 COG0474 MgtA Cation transport 100.0 1.1E-72 2.4E-77 651.9 40.1 454 9-497 439-900 (917)
8 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2.2E-71 4.8E-76 642.9 49.5 450 9-511 427-882 (884)
9 PRK15122 magnesium-transportin 100.0 6.2E-69 1.3E-73 619.8 46.6 458 8-515 437-901 (903)
10 PRK10517 magnesium-transportin 100.0 1.7E-66 3.7E-71 598.7 43.0 452 8-513 439-899 (902)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 7.6E-66 1.6E-70 593.5 47.9 453 8-514 404-865 (867)
12 KOG0203|consensus 100.0 4.5E-67 9.8E-72 559.2 13.4 481 8-511 468-1007(1019)
13 TIGR01657 P-ATPase-V P-type AT 100.0 4.8E-62 1E-66 573.3 41.3 440 8-490 550-1049(1054)
14 TIGR01652 ATPase-Plipid phosph 100.0 4.7E-61 1E-65 566.4 38.5 471 8-515 507-1050(1057)
15 PLN03190 aminophospholipid tra 100.0 5.6E-58 1.2E-62 536.1 42.6 471 7-515 600-1145(1178)
16 KOG0206|consensus 100.0 1.9E-58 4E-63 523.3 14.0 477 7-516 526-1081(1151)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 5.8E-54 1.3E-58 489.0 42.0 397 9-470 352-752 (755)
18 KOG0210|consensus 100.0 1.4E-51 3E-56 430.6 25.5 457 7-514 536-1043(1051)
19 KOG0208|consensus 100.0 7.3E-50 1.6E-54 433.5 30.8 414 4-460 595-1065(1140)
20 PRK14010 potassium-transportin 100.0 1.2E-38 2.7E-43 352.8 24.7 217 15-319 367-585 (673)
21 KOG0209|consensus 100.0 2.3E-37 5E-42 329.7 32.0 457 9-510 569-1149(1160)
22 PRK01122 potassium-transportin 100.0 8.6E-36 1.9E-40 330.6 25.8 250 12-349 368-633 (679)
23 TIGR01497 kdpB K+-transporting 100.0 2.3E-32 4.9E-37 302.6 26.0 250 13-349 369-634 (675)
24 KOG0205|consensus 100.0 1.1E-31 2.3E-36 280.6 16.8 292 8-342 394-688 (942)
25 TIGR01494 ATPase_P-type ATPase 100.0 1.1E-28 2.4E-33 271.3 23.6 221 14-348 278-498 (499)
26 COG2217 ZntA Cation transport 100.0 2.6E-28 5.7E-33 271.0 22.3 160 118-320 523-682 (713)
27 KOG0207|consensus 99.9 8.2E-26 1.8E-30 246.8 22.1 192 120-355 711-906 (951)
28 PRK11033 zntA zinc/cadmium/mer 99.9 2.6E-25 5.6E-30 253.4 25.8 174 73-320 538-711 (741)
29 PF00689 Cation_ATPase_C: Cati 99.9 4.1E-24 8.8E-29 203.8 12.7 180 326-508 1-182 (182)
30 TIGR01525 ATPase-IB_hvy heavy 99.9 6.9E-23 1.5E-27 227.8 22.6 177 73-321 354-531 (556)
31 COG2216 KdpB High-affinity K+ 99.9 2.5E-23 5.4E-28 213.8 16.3 248 15-349 372-635 (681)
32 PRK10671 copA copper exporting 99.9 9.3E-23 2E-27 236.7 22.8 175 72-318 619-793 (834)
33 TIGR01512 ATPase-IB2_Cd heavy 99.9 1.4E-22 3E-27 224.1 20.4 163 117-321 347-510 (536)
34 TIGR01511 ATPase-IB1_Cu copper 99.9 1.2E-21 2.5E-26 217.6 20.5 161 117-321 390-550 (562)
35 KOG4383|consensus 99.9 6.1E-21 1.3E-25 200.3 15.3 477 42-529 700-1349(1354)
36 PRK10513 sugar phosphate phosp 99.6 3.6E-15 7.7E-20 151.3 13.5 159 131-291 19-266 (270)
37 PF00702 Hydrolase: haloacid d 99.6 1E-15 2.3E-20 149.2 7.5 97 120-256 115-215 (215)
38 PRK15126 thiamin pyrimidine py 99.6 2E-14 4.3E-19 146.0 13.0 156 131-291 18-260 (272)
39 COG0561 Cof Predicted hydrolas 99.6 2.8E-14 6E-19 144.3 13.9 154 133-291 21-259 (264)
40 PRK10976 putative hydrolase; P 99.6 4.5E-14 9.8E-19 142.9 15.4 156 131-291 18-262 (266)
41 PRK01158 phosphoglycolate phos 99.5 6.7E-14 1.5E-18 138.4 12.9 155 132-291 20-227 (230)
42 COG4087 Soluble P-type ATPase 99.5 1.8E-13 4E-18 117.1 11.9 127 121-290 19-147 (152)
43 PF08282 Hydrolase_3: haloacid 99.5 1.3E-13 2.8E-18 137.3 12.4 155 130-289 13-254 (254)
44 PLN02887 hydrolase family prot 99.5 6E-13 1.3E-17 146.5 18.4 71 219-291 507-577 (580)
45 TIGR01482 SPP-subfamily Sucros 99.5 2E-13 4.4E-18 134.4 12.5 154 132-290 15-222 (225)
46 TIGR01487 SPP-like sucrose-pho 99.5 1.1E-13 2.5E-18 135.4 8.6 151 132-289 18-215 (215)
47 PRK10530 pyridoxal phosphate ( 99.5 4.9E-13 1.1E-17 135.7 12.5 72 218-291 198-269 (272)
48 PRK03669 mannosyl-3-phosphogly 99.4 2.3E-12 5E-17 130.8 12.0 157 132-291 24-266 (271)
49 TIGR00099 Cof-subfamily Cof su 99.3 5.7E-12 1.2E-16 126.8 11.3 154 131-289 15-256 (256)
50 TIGR01486 HAD-SF-IIB-MPGP mann 99.3 1.1E-11 2.5E-16 124.7 12.4 155 133-291 17-254 (256)
51 TIGR02471 sucr_syn_bact_C sucr 99.2 8.5E-11 1.8E-15 116.8 10.6 150 138-291 21-233 (236)
52 PRK00192 mannosyl-3-phosphogly 99.2 2.2E-10 4.7E-15 116.5 12.8 157 130-291 19-268 (273)
53 PRK11133 serB phosphoserine ph 99.1 1.6E-10 3.5E-15 119.3 9.5 134 132-290 181-316 (322)
54 TIGR02726 phenyl_P_delta pheny 99.1 7E-10 1.5E-14 103.8 9.8 107 138-285 40-146 (169)
55 TIGR01485 SPP_plant-cyano sucr 99.0 1.6E-09 3.4E-14 108.7 12.0 159 130-291 19-245 (249)
56 COG0560 SerB Phosphoserine pho 99.0 2.7E-09 5.9E-14 103.8 11.0 124 131-278 76-200 (212)
57 TIGR01670 YrbI-phosphatas 3-de 99.0 3.4E-09 7.3E-14 98.1 10.7 110 140-290 36-146 (154)
58 TIGR00338 serB phosphoserine p 99.0 2.4E-09 5.1E-14 105.0 9.7 133 132-288 85-218 (219)
59 TIGR02137 HSK-PSP phosphoserin 99.0 4.5E-09 9.7E-14 101.7 10.9 130 132-292 68-198 (203)
60 COG1778 Low specificity phosph 98.9 4.9E-09 1.1E-13 93.5 8.7 122 139-301 42-167 (170)
61 PLN02382 probable sucrose-phos 98.9 1.9E-08 4.2E-13 107.6 13.0 157 133-291 29-258 (413)
62 PRK09484 3-deoxy-D-manno-octul 98.9 1.1E-08 2.4E-13 97.5 9.8 113 138-291 54-170 (183)
63 TIGR02463 MPGP_rel mannosyl-3- 98.8 1.6E-08 3.4E-13 99.4 10.6 126 133-261 17-220 (221)
64 TIGR02461 osmo_MPG_phos mannos 98.8 2.7E-08 5.8E-13 98.1 10.1 43 130-172 13-55 (225)
65 PF12424 ATP_Ca_trans_C: Plasm 98.8 8.7E-10 1.9E-14 84.9 -0.5 35 550-584 1-35 (66)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.7 6.4E-08 1.4E-12 93.3 9.7 121 132-274 80-200 (201)
67 PRK12702 mannosyl-3-phosphogly 98.7 1.6E-07 3.5E-12 93.9 10.9 52 131-185 17-68 (302)
68 PRK14502 bifunctional mannosyl 98.6 1.1E-07 2.4E-12 104.9 10.0 41 132-172 433-473 (694)
69 PRK10187 trehalose-6-phosphate 98.6 1.9E-07 4E-12 94.5 10.8 151 132-290 36-241 (266)
70 PRK08238 hypothetical protein; 98.6 1.5E-05 3.2E-10 86.9 25.4 99 132-268 72-170 (479)
71 PRK13582 thrH phosphoserine ph 98.5 7.7E-07 1.7E-11 86.2 11.2 126 132-290 68-196 (205)
72 PF13246 Hydrolase_like2: Puta 98.5 9.4E-08 2E-12 80.0 3.6 44 7-52 45-91 (91)
73 PTZ00174 phosphomannomutase; P 98.4 1.6E-06 3.4E-11 86.8 10.4 54 218-277 187-245 (247)
74 TIGR01484 HAD-SF-IIB HAD-super 98.4 9.9E-07 2.1E-11 85.4 8.2 129 132-261 17-204 (204)
75 KOG1615|consensus 98.4 1.1E-06 2.3E-11 81.3 7.4 112 132-262 88-199 (227)
76 PF05116 S6PP: Sucrose-6F-phos 98.3 1.1E-06 2.4E-11 87.8 8.0 73 218-291 164-244 (247)
77 PLN02954 phosphoserine phospha 98.3 7.7E-06 1.7E-10 80.4 12.5 132 132-288 84-222 (224)
78 COG0546 Gph Predicted phosphat 98.3 3.9E-06 8.4E-11 82.5 10.2 127 130-290 87-218 (220)
79 PRK13222 phosphoglycolate phos 98.3 6.3E-06 1.4E-10 81.0 11.3 128 131-291 92-223 (226)
80 TIGR03333 salvage_mtnX 2-hydro 98.3 7.3E-06 1.6E-10 80.1 11.7 135 131-290 69-209 (214)
81 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.3 2.8E-06 6.2E-11 82.0 8.5 112 130-263 85-198 (202)
82 TIGR01454 AHBA_synth_RP 3-amin 98.2 1E-05 2.2E-10 78.4 10.9 126 131-289 74-203 (205)
83 PRK14501 putative bifunctional 98.2 1.5E-05 3.2E-10 92.1 14.0 149 132-290 514-721 (726)
84 PRK09552 mtnX 2-hydroxy-3-keto 98.2 1.2E-05 2.7E-10 78.8 11.2 132 132-290 74-213 (219)
85 PF12710 HAD: haloacid dehalog 98.2 3.8E-06 8.2E-11 80.2 7.0 96 135-253 92-192 (192)
86 TIGR01488 HAD-SF-IB Haloacid D 98.2 6.7E-06 1.5E-10 77.5 8.4 104 132-255 73-177 (177)
87 cd01427 HAD_like Haloacid deha 98.1 1.3E-05 2.7E-10 71.2 8.9 118 128-260 20-138 (139)
88 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2.6E-05 5.7E-10 74.1 9.2 115 131-260 71-186 (188)
89 PRK10826 2-deoxyglucose-6-phos 98.0 4E-05 8.7E-10 75.3 10.4 123 131-286 91-216 (222)
90 PRK13223 phosphoglycolate phos 98.0 4.2E-05 9.1E-10 77.7 10.4 128 130-290 99-230 (272)
91 PRK13288 pyrophosphatase PpaX; 98.0 3.8E-05 8.3E-10 74.9 9.5 125 132-289 82-210 (214)
92 TIGR01449 PGP_bact 2-phosphogl 97.9 3.8E-05 8.1E-10 74.7 9.4 123 132-287 85-211 (213)
93 TIGR00685 T6PP trehalose-phosp 97.9 3.3E-05 7.1E-10 77.1 7.7 71 214-290 162-240 (244)
94 PRK13226 phosphoglycolate phos 97.9 8.1E-05 1.8E-09 73.5 10.2 127 132-291 95-226 (229)
95 PRK13225 phosphoglycolate phos 97.8 0.00016 3.4E-09 73.4 12.0 121 132-289 142-267 (273)
96 PLN02580 trehalose-phosphatase 97.8 6.7E-05 1.5E-09 78.8 8.5 68 218-290 300-374 (384)
97 TIGR01544 HAD-SF-IE haloacid d 97.7 0.00045 9.8E-09 69.5 13.3 143 131-290 120-274 (277)
98 COG3769 Predicted hydrolase (H 97.7 0.0002 4.4E-09 67.8 9.7 56 219-274 191-247 (274)
99 smart00775 LNS2 LNS2 domain. T 97.7 0.00029 6.3E-09 65.3 10.6 110 130-258 25-141 (157)
100 PLN02770 haloacid dehalogenase 97.7 0.00025 5.4E-09 71.0 10.9 117 132-279 108-227 (248)
101 TIGR01545 YfhB_g-proteo haloac 97.7 0.00023 5E-09 69.3 9.7 107 132-262 94-201 (210)
102 PRK13478 phosphonoacetaldehyde 97.6 0.0006 1.3E-08 69.0 12.6 127 132-290 101-255 (267)
103 PRK11590 hypothetical protein; 97.6 0.00041 8.8E-09 67.7 11.0 107 132-262 95-202 (211)
104 TIGR01422 phosphonatase phosph 97.6 0.00045 9.8E-09 69.2 11.0 97 132-258 99-196 (253)
105 TIGR03351 PhnX-like phosphonat 97.6 0.00034 7.3E-09 68.5 9.9 125 131-288 86-218 (220)
106 PLN02205 alpha,alpha-trehalose 97.6 0.00048 1E-08 80.2 12.5 153 131-290 615-842 (854)
107 PLN03243 haloacid dehalogenase 97.6 0.0005 1.1E-08 69.3 10.7 122 132-286 109-231 (260)
108 PRK11587 putative phosphatase; 97.4 0.0011 2.5E-08 64.8 10.6 115 132-278 83-198 (218)
109 COG4030 Uncharacterized protei 97.4 0.0018 4E-08 61.6 11.1 150 132-290 83-262 (315)
110 TIGR01662 HAD-SF-IIIA HAD-supe 97.3 0.0016 3.4E-08 58.3 9.4 92 132-258 25-126 (132)
111 PLN03017 trehalose-phosphatase 97.2 0.0016 3.5E-08 67.9 10.0 68 218-290 282-356 (366)
112 PLN02575 haloacid dehalogenase 97.2 0.0027 5.8E-08 67.0 11.1 123 131-286 215-338 (381)
113 TIGR02253 CTE7 HAD superfamily 97.2 0.0017 3.8E-08 63.4 9.2 100 132-262 94-195 (221)
114 PRK06698 bifunctional 5'-methy 97.2 0.0022 4.7E-08 70.2 10.7 124 132-291 330-455 (459)
115 PLN02779 haloacid dehalogenase 97.1 0.0014 3E-08 67.1 8.1 118 132-278 144-263 (286)
116 PLN02423 phosphomannomutase 97.1 0.0032 6.9E-08 62.9 10.5 34 131-165 23-56 (245)
117 PRK14988 GMP/IMP nucleotidase; 97.1 0.0016 3.6E-08 64.0 8.1 98 131-259 92-189 (224)
118 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.0017 3.7E-08 62.4 8.0 94 130-255 104-197 (197)
119 TIGR01428 HAD_type_II 2-haloal 97.0 0.0021 4.6E-08 61.7 8.2 97 132-259 92-188 (198)
120 PHA02530 pseT polynucleotide k 97.0 0.0013 2.9E-08 67.6 7.0 109 129-259 184-292 (300)
121 PRK08942 D,D-heptose 1,7-bisph 97.0 0.0063 1.4E-07 57.7 10.7 129 132-290 29-177 (181)
122 PRK11009 aphA acid phosphatase 97.0 0.0029 6.3E-08 62.5 8.3 89 132-258 114-206 (237)
123 PRK09449 dUMP phosphatase; Pro 96.9 0.0044 9.5E-08 60.7 9.4 125 132-289 95-222 (224)
124 TIGR01672 AphA HAD superfamily 96.9 0.0042 9.1E-08 61.4 8.7 87 133-257 115-205 (237)
125 TIGR02009 PGMB-YQAB-SF beta-ph 96.8 0.003 6.5E-08 59.8 7.2 95 131-258 87-181 (185)
126 TIGR01990 bPGM beta-phosphoglu 96.8 0.0026 5.6E-08 60.2 6.6 94 132-258 87-180 (185)
127 TIGR02254 YjjG/YfnB HAD superf 96.8 0.0038 8.2E-08 61.0 7.8 122 132-287 97-222 (224)
128 PF13419 HAD_2: Haloacid dehal 96.8 0.0016 3.5E-08 60.4 4.9 98 130-258 75-172 (176)
129 PRK06769 hypothetical protein; 96.8 0.0044 9.5E-08 58.4 7.8 123 133-289 29-171 (173)
130 TIGR01685 MDP-1 magnesium-depe 96.7 0.009 2E-07 56.2 8.9 115 122-260 35-154 (174)
131 PLN02940 riboflavin kinase 96.7 0.0052 1.1E-07 65.5 8.3 96 132-258 93-189 (382)
132 TIGR01509 HAD-SF-IA-v3 haloaci 96.6 0.0083 1.8E-07 56.4 8.5 95 132-258 85-179 (183)
133 TIGR01668 YqeG_hyp_ppase HAD s 96.6 0.0097 2.1E-07 55.9 8.5 87 132-258 43-131 (170)
134 TIGR01656 Histidinol-ppas hist 96.5 0.01 2.2E-07 54.3 7.9 99 132-259 27-141 (147)
135 PLN02811 hydrolase 96.5 0.0098 2.1E-07 58.2 8.2 98 131-258 77-179 (220)
136 COG4359 Uncharacterized conser 96.4 0.0058 1.3E-07 56.5 5.5 109 132-261 73-184 (220)
137 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.4 0.057 1.2E-06 54.0 13.3 50 125-174 10-62 (249)
138 PRK10563 6-phosphogluconate ph 96.4 0.005 1.1E-07 60.3 5.5 97 131-260 87-183 (221)
139 TIGR00213 GmhB_yaeD D,D-heptos 96.4 0.014 3E-07 55.1 8.1 122 133-278 27-169 (176)
140 PRK10444 UMP phosphatase; Prov 96.3 0.049 1.1E-06 54.5 12.2 48 125-172 10-60 (248)
141 TIGR01549 HAD-SF-IA-v1 haloaci 96.3 0.013 2.8E-07 53.7 7.4 93 130-256 62-154 (154)
142 TIGR01261 hisB_Nterm histidino 96.3 0.011 2.3E-07 55.1 6.8 97 132-260 29-144 (161)
143 TIGR02252 DREG-2 REG-2-like, H 96.3 0.015 3.3E-07 55.9 8.2 95 132-258 105-200 (203)
144 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.9 0.19 4.1E-06 50.6 14.4 48 125-172 10-64 (257)
145 TIGR01686 FkbH FkbH-like domai 95.9 0.021 4.5E-07 59.5 7.6 95 132-262 31-129 (320)
146 smart00577 CPDc catalytic doma 95.9 0.0089 1.9E-07 54.7 4.1 94 132-260 45-139 (148)
147 TIGR01664 DNA-3'-Pase DNA 3'-p 95.8 0.032 6.9E-07 52.2 7.7 94 133-259 43-158 (166)
148 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.8 0.1 2.2E-06 51.9 11.6 48 125-172 17-66 (242)
149 TIGR01681 HAD-SF-IIIC HAD-supe 95.7 0.028 6.2E-07 50.0 6.7 95 132-254 29-126 (128)
150 PLN02151 trehalose-phosphatase 95.7 0.024 5.3E-07 59.0 7.1 67 218-290 268-342 (354)
151 PLN02919 haloacid dehalogenase 95.7 0.046 1E-06 65.8 10.1 132 132-293 161-295 (1057)
152 TIGR01691 enolase-ppase 2,3-di 95.7 0.052 1.1E-06 53.2 8.7 99 129-260 92-193 (220)
153 PF06888 Put_Phosphatase: Puta 95.5 0.086 1.9E-06 52.0 9.7 118 132-260 71-196 (234)
154 KOG3120|consensus 95.2 0.086 1.9E-06 50.4 8.1 122 132-265 84-212 (256)
155 PRK05446 imidazole glycerol-ph 95.1 0.081 1.8E-06 55.5 8.5 102 131-260 29-145 (354)
156 TIGR01533 lipo_e_P4 5'-nucleot 95.0 0.12 2.6E-06 52.1 9.2 87 130-253 116-205 (266)
157 PF08235 LNS2: LNS2 (Lipin/Ned 94.9 0.23 4.9E-06 45.7 9.8 108 131-258 26-141 (157)
158 PHA02597 30.2 hypothetical pro 94.7 0.1 2.2E-06 50.0 7.5 95 132-259 74-170 (197)
159 PF02358 Trehalose_PPase: Treh 94.7 0.031 6.7E-07 55.4 3.9 68 211-279 157-233 (235)
160 PRK09456 ?-D-glucose-1-phospha 94.6 0.12 2.6E-06 49.6 7.8 97 132-259 84-181 (199)
161 TIGR02247 HAD-1A3-hyp Epoxide 94.5 0.065 1.4E-06 51.9 5.7 97 131-258 93-191 (211)
162 COG2179 Predicted hydrolase of 94.4 0.19 4.1E-06 46.2 7.9 86 132-257 46-132 (175)
163 TIGR01675 plant-AP plant acid 93.7 0.3 6.6E-06 47.9 8.4 43 130-172 118-163 (229)
164 TIGR01993 Pyr-5-nucltdase pyri 93.6 0.25 5.3E-06 46.7 7.6 98 132-259 84-181 (184)
165 COG1877 OtsB Trehalose-6-phosp 93.4 0.49 1.1E-05 47.6 9.5 127 129-256 37-218 (266)
166 PRK10725 fructose-1-P/6-phosph 93.1 0.3 6.5E-06 46.1 7.2 93 133-258 89-181 (188)
167 PLN02645 phosphoglycolate phos 92.7 0.31 6.8E-06 50.4 7.3 48 125-172 37-87 (311)
168 COG0637 Predicted phosphatase/ 92.3 0.9 2E-05 44.5 9.6 97 131-258 85-181 (221)
169 PF09419 PGP_phosphatase: Mito 92.1 0.71 1.5E-05 43.1 8.0 91 130-256 57-157 (168)
170 PRK10748 flavin mononucleotide 91.3 0.52 1.1E-05 46.7 6.8 94 132-262 113-207 (238)
171 COG0647 NagD Predicted sugar p 90.3 2.8 6.1E-05 42.3 10.9 45 124-168 16-60 (269)
172 PF13344 Hydrolase_6: Haloacid 89.1 0.25 5.3E-06 42.0 2.0 49 125-173 7-58 (101)
173 PLN03063 alpha,alpha-trehalose 88.7 7.2 0.00016 45.8 14.3 38 133-170 533-571 (797)
174 TIGR01684 viral_ppase viral ph 88.6 1 2.3E-05 45.6 6.3 40 133-172 146-186 (301)
175 TIGR01663 PNK-3'Pase polynucle 85.6 2.6 5.6E-05 46.7 7.9 39 133-171 198-248 (526)
176 TIGR01689 EcbF-BcbF capsule bi 85.5 0.85 1.9E-05 40.4 3.3 33 131-163 23-55 (126)
177 PTZ00445 p36-lilke protein; Pr 85.4 2.5 5.4E-05 40.8 6.6 115 132-257 75-199 (219)
178 PLN02177 glycerol-3-phosphate 85.2 2.9 6.3E-05 46.1 8.0 102 133-263 111-215 (497)
179 PHA03398 viral phosphatase sup 84.9 2.1 4.5E-05 43.6 6.2 50 134-184 150-199 (303)
180 PF05822 UMPH-1: Pyrimidine 5' 84.2 5.9 0.00013 39.3 8.9 139 132-290 90-242 (246)
181 COG0241 HisB Histidinol phosph 83.9 4.5 9.7E-05 38.2 7.6 104 133-258 32-144 (181)
182 PLN03064 alpha,alpha-trehalose 83.6 11 0.00024 44.7 12.2 38 133-170 623-661 (934)
183 TIGR02251 HIF-SF_euk Dullard-l 82.1 1 2.2E-05 41.8 2.5 43 128-171 38-80 (162)
184 COG1011 Predicted hydrolase (H 80.9 7 0.00015 37.8 8.2 97 130-258 97-194 (229)
185 PF03767 Acid_phosphat_B: HAD 80.9 2.2 4.8E-05 42.0 4.6 42 131-172 114-158 (229)
186 TIGR02468 sucrsPsyn_pln sucros 79.9 14 0.00031 44.2 11.4 45 218-262 955-1001(1050)
187 TIGR01680 Veg_Stor_Prot vegeta 77.1 11 0.00023 38.0 8.0 31 130-160 143-173 (275)
188 TIGR01452 PGP_euk phosphoglyco 76.8 5.5 0.00012 40.4 6.2 48 125-172 11-61 (279)
189 KOG3040|consensus 75.7 6.1 0.00013 37.8 5.5 52 121-172 12-66 (262)
190 COG3700 AphA Acid phosphatase 75.4 6.7 0.00015 36.5 5.6 94 130-261 111-210 (237)
191 PF13242 Hydrolase_like: HAD-h 73.9 3.5 7.6E-05 32.6 3.1 47 232-278 17-70 (75)
192 TIGR01493 HAD-SF-IA-v2 Haloaci 72.3 6.8 0.00015 36.3 5.2 34 132-172 90-123 (175)
193 PF12689 Acid_PPase: Acid Phos 70.8 22 0.00047 33.3 8.0 97 132-254 45-142 (169)
194 PLN02645 phosphoglycolate phos 69.6 25 0.00054 36.3 9.1 66 220-288 232-306 (311)
195 PF15603 Imm45: Immunity prote 68.8 18 0.00039 29.4 6.1 37 50-86 44-80 (82)
196 TIGR02244 HAD-IG-Ncltidse HAD 66.3 35 0.00077 35.7 9.3 38 133-170 185-223 (343)
197 TIGR01460 HAD-SF-IIA Haloacid 64.2 14 0.00031 36.4 5.8 48 125-172 7-58 (236)
198 PF11019 DUF2608: Protein of u 62.6 16 0.00035 36.5 5.8 113 132-258 81-204 (252)
199 TIGR01459 HAD-SF-IIA-hyp4 HAD- 61.5 12 0.00025 37.1 4.6 97 134-259 140-237 (242)
200 PRK14194 bifunctional 5,10-met 51.2 83 0.0018 32.3 8.8 67 212-281 138-211 (301)
201 PF00389 2-Hacid_dh: D-isomer 51.1 57 0.0012 28.7 6.9 29 234-262 59-89 (133)
202 TIGR01452 PGP_euk phosphoglyco 50.7 27 0.00059 35.3 5.3 35 223-258 207-242 (279)
203 TIGR02250 FCP1_euk FCP1-like p 49.7 26 0.00057 32.2 4.5 41 131-172 57-97 (156)
204 COG1210 GalU UDP-glucose pyrop 49.3 1.1E+02 0.0024 30.9 8.9 28 134-161 35-63 (291)
205 cd00860 ThrRS_anticodon ThrRS 49.1 51 0.0011 26.5 5.8 55 127-185 7-62 (91)
206 KOG3109|consensus 46.1 1.4E+02 0.003 29.2 8.7 107 125-258 92-200 (244)
207 TIGR01460 HAD-SF-IIA Haloacid 45.0 56 0.0012 32.1 6.4 39 220-258 190-229 (236)
208 PF03129 HGTP_anticodon: Antic 44.5 55 0.0012 26.7 5.4 58 125-186 3-64 (94)
209 PF06570 DUF1129: Protein of u 43.1 3.1E+02 0.0067 26.3 11.7 14 488-501 180-193 (206)
210 KOG2914|consensus 42.7 57 0.0012 31.9 5.9 99 132-259 92-192 (222)
211 COG0078 ArgF Ornithine carbamo 42.6 93 0.002 31.9 7.4 79 149-261 100-180 (310)
212 PRK14179 bifunctional 5,10-met 42.3 1.5E+02 0.0034 30.1 9.1 65 212-279 137-208 (284)
213 PRK14169 bifunctional 5,10-met 42.0 1.3E+02 0.0028 30.6 8.5 64 213-279 136-206 (282)
214 KOG3085|consensus 41.0 96 0.0021 30.7 7.1 99 132-262 113-213 (237)
215 COG2503 Predicted secreted aci 36.8 1.7E+02 0.0037 29.0 7.9 42 132-173 122-167 (274)
216 cd05017 SIS_PGI_PMI_1 The memb 35.2 64 0.0014 27.8 4.5 40 130-171 52-91 (119)
217 PRK14174 bifunctional 5,10-met 35.1 1.8E+02 0.004 29.7 8.4 65 212-279 138-213 (295)
218 COG1832 Predicted CoA-binding 34.8 80 0.0017 28.3 4.9 42 115-156 10-51 (140)
219 PF13380 CoA_binding_2: CoA bi 33.9 67 0.0015 27.8 4.4 39 133-171 64-103 (116)
220 PF06941 NT5C: 5' nucleotidase 32.3 37 0.0008 32.1 2.7 29 132-160 73-101 (191)
221 PF08645 PNK3P: Polynucleotide 31.7 43 0.00094 30.8 3.0 24 133-156 30-53 (159)
222 PRK14170 bifunctional 5,10-met 31.1 2.1E+02 0.0045 29.2 7.9 64 213-279 137-207 (284)
223 COG0279 GmhA Phosphoheptose is 30.9 49 0.0011 30.7 3.0 46 119-166 109-154 (176)
224 PRK14188 bifunctional 5,10-met 30.3 2.8E+02 0.0061 28.4 8.8 64 213-279 138-208 (296)
225 PRK14172 bifunctional 5,10-met 29.9 2.4E+02 0.0052 28.6 8.1 65 212-279 137-208 (278)
226 PRK14182 bifunctional 5,10-met 29.5 2.4E+02 0.0052 28.7 8.0 58 222-279 143-207 (282)
227 cd02071 MM_CoA_mut_B12_BD meth 29.1 69 0.0015 27.9 3.7 81 76-171 21-103 (122)
228 cd00861 ProRS_anticodon_short 29.1 87 0.0019 25.3 4.2 50 133-186 16-66 (94)
229 cd00738 HGTP_anticodon HGTP an 29.1 1.2E+02 0.0026 24.3 5.0 40 132-171 15-55 (94)
230 PRK14177 bifunctional 5,10-met 28.9 3.4E+02 0.0075 27.6 9.0 65 212-279 138-209 (284)
231 KOG2882|consensus 28.5 91 0.002 31.8 4.8 47 125-171 31-80 (306)
232 cd00859 HisRS_anticodon HisRS 28.0 1.7E+02 0.0037 22.9 5.7 45 127-171 7-52 (91)
233 cd05008 SIS_GlmS_GlmD_1 SIS (S 27.8 46 0.00099 28.8 2.3 33 131-163 56-88 (126)
234 cd05014 SIS_Kpsf KpsF-like pro 27.1 41 0.00088 29.2 1.9 34 132-165 58-91 (128)
235 PRK14190 bifunctional 5,10-met 26.8 3.6E+02 0.0077 27.5 8.7 64 212-278 137-207 (284)
236 cd04728 ThiG Thiazole synthase 26.7 2.2E+02 0.0047 28.4 6.9 53 116-168 88-143 (248)
237 PRK00856 pyrB aspartate carbam 26.5 3.7E+02 0.0079 27.7 9.0 80 135-247 88-167 (305)
238 PRK14191 bifunctional 5,10-met 26.2 3.5E+02 0.0077 27.6 8.6 65 212-279 136-207 (285)
239 cd02067 B12-binding B12 bindin 26.2 94 0.002 26.7 4.0 81 76-171 21-103 (119)
240 PF05240 APOBEC_C: APOBEC-like 25.8 62 0.0013 24.2 2.3 24 135-158 2-25 (55)
241 PF04056 Ssl1: Ssl1-like; Int 25.4 2.1E+02 0.0046 27.3 6.5 63 121-189 105-168 (193)
242 cd05710 SIS_1 A subgroup of th 24.9 55 0.0012 28.4 2.3 32 132-163 58-89 (120)
243 PLN02897 tetrahydrofolate dehy 24.7 4.5E+02 0.0097 27.6 9.1 46 127-172 62-117 (345)
244 PRK10481 hypothetical protein; 24.5 4.7E+02 0.01 25.6 8.8 125 56-186 64-193 (224)
245 PRK00208 thiG thiazole synthas 24.4 2.6E+02 0.0056 27.9 6.9 54 115-168 87-143 (250)
246 COG3707 AmiR Response regulato 23.9 4E+02 0.0087 25.5 7.8 78 75-171 22-100 (194)
247 PF06609 TRI12: Fungal trichot 23.1 1.1E+03 0.025 26.7 14.5 16 494-509 362-377 (599)
248 PRK14186 bifunctional 5,10-met 23.1 4.6E+02 0.0099 26.9 8.8 46 233-278 155-207 (297)
249 TIGR01456 CECR5 HAD-superfamil 22.6 73 0.0016 33.0 3.0 47 125-171 9-63 (321)
250 TIGR00129 fdhD_narQ formate de 22.4 1.3E+02 0.0028 29.8 4.5 34 138-171 182-215 (237)
251 cd00858 GlyRS_anticodon GlyRS 21.8 1.7E+02 0.0037 25.3 4.8 50 131-185 38-88 (121)
252 PRK00724 formate dehydrogenase 21.7 1.4E+02 0.0029 30.1 4.7 34 138-171 211-244 (263)
253 TIGR01675 plant-AP plant acid 21.3 1.9E+02 0.0041 28.5 5.4 102 42-161 85-208 (229)
254 KOG1651|consensus 21.0 1.4E+02 0.003 27.8 4.0 40 44-95 41-80 (171)
255 TIGR02329 propionate_PrpR prop 20.9 1.6E+02 0.0035 32.9 5.4 49 133-189 130-178 (526)
256 PF13840 ACT_7: ACT domain ; P 20.8 1.2E+02 0.0026 23.2 3.1 38 118-155 3-42 (65)
257 PF06679 DUF1180: Protein of u 20.6 1.5E+02 0.0033 27.4 4.3 37 504-540 113-151 (163)
258 PRK14189 bifunctional 5,10-met 20.6 3.9E+02 0.0085 27.2 7.7 65 212-279 137-208 (285)
259 PRK14167 bifunctional 5,10-met 20.5 5.2E+02 0.011 26.6 8.5 63 213-278 137-210 (297)
260 PRK04284 ornithine carbamoyltr 20.4 5E+02 0.011 27.1 8.6 36 135-171 88-123 (332)
261 cd01019 ZnuA Zinc binding prot 20.4 2.6E+02 0.0057 28.3 6.5 53 119-171 196-252 (286)
262 TIGR02854 spore_II_GA sigma-E 20.3 9.2E+02 0.02 24.5 10.7 16 334-349 8-23 (288)
No 1
>KOG0204|consensus
Probab=100.00 E-value=1.9e-113 Score=915.28 Aligned_cols=493 Identities=60% Similarity=0.977 Sum_probs=465.1
Q ss_pred ccccCCcceeeccCCcccceeeeEEeeCCCCc-EEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhh
Q psy8116 5 IPEENADPGLHFQLSAARALMKVTVIPRKGGG-YRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMAC 80 (591)
Q Consensus 5 ~~~~~~~~v~~fpF~s~rk~msv~v~~~~~~~-~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 80 (591)
+|++++.++++| ||+||+|+ ++++.++|+ | +|+ +|+||++|+++++.+|+.+++++++++ .+++.|++||+
T Consensus 529 R~e~~v~kv~~F--NS~kK~~g-vvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~-~~~~~Ie~mA~ 603 (1034)
T KOG0204|consen 529 RPEEKVVKVYPF--NSVKKRMG-VVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRK-SFKDVIEPMAS 603 (1034)
T ss_pred cchhheeEEecc--Ccccceee-EEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHH-HHHHHHHHHHH
Confidence 477887777766 99999999 777877776 7 888 999999999999999999999999888 56899999999
Q ss_pred ccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHH
Q psy8116 81 DGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNIN 160 (591)
Q Consensus 81 ~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ 160 (591)
+||||+|+|||++.+.+ .++++|++++..+.||+++|++||+||+||||+++|+.|++|||+|.|+||||..
T Consensus 604 ~~LRti~lAy~df~~~~--------~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~ 675 (1034)
T KOG0204|consen 604 EGLRTICLAYRDFVAGP--------DEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNIN 675 (1034)
T ss_pred hhhheeeEEeeccccCC--------CCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHH
Confidence 99999999999997752 3467788888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEE
Q psy8116 161 TARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVA 240 (591)
Q Consensus 161 ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va 240 (591)
||++||.+|||+.+++++++++|++|++ ..++..++++++++|+||++|.||+.+|+.|+ ..+++||
T Consensus 676 TAkAIA~eCGILt~~~d~~~lEG~eFr~--------~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~-----~~g~VVA 742 (1034)
T KOG0204|consen 676 TAKAIARECGILTPGGDFLALEGKEFRE--------LSQEERDKIWPKLRVLARSSPNDKHLLVKGLI-----KQGEVVA 742 (1034)
T ss_pred HHHHHHHHcccccCCCccceecchhhhh--------cCHHHHHhhhhhheeeecCCCchHHHHHHHHH-----hcCcEEE
Confidence 9999999999999999999999999985 46788899999999999999999999999964 6799999
Q ss_pred EECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Q psy8116 241 VTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIG 320 (591)
Q Consensus 241 ~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~ 320 (591)
++|||+||+|||++||||+|||++|+|+|||+||+|++||||++|+++++|||++|+||+||+||+|+.|++++++.|.+
T Consensus 743 VTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~ 822 (1034)
T KOG0204|consen 743 VTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVS 822 (1034)
T ss_pred EecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8116 321 ACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKL 400 (591)
Q Consensus 321 ~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 400 (591)
+|..+.+||+++||||+|+|||++.+||||+|||++++|+|+|++|++|+|++.||+++++|++||.+++|++.|.|..+
T Consensus 823 A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~i 902 (1034)
T KOG0204|consen 823 ACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSI 902 (1034)
T ss_pred hhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhccccccc
Q psy8116 401 LDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFST 480 (591)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~F~~ 480 (591)
|+. ..+.++++.+++|++||+||+||+||+||+|++| ++|+|+++++|++|+.++.+++++|+++++|++.+|++
T Consensus 903 f~~----~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~-~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st 977 (1034)
T KOG0204|consen 903 FGL----NGPLHSPPSVHNTIIFNTFVFCQVFNEINARKID-ERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFST 977 (1034)
T ss_pred hcc----CCCCCCchhhheeeehhHHHHHHHHHHHhhcchh-HHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceee
Confidence 873 3455667889999999999999999999999999 78999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHhhccCccccccccCCCCCcchh
Q psy8116 481 KSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPKILSWGRGHPEEYT 528 (591)
Q Consensus 481 ~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~~~~~~~~g~~~~~~~~ 528 (591)
.+|++.+|+||++++++.++|++++|.+|.+.+|+....+.++..+..
T Consensus 978 ~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~~~~~~~~~ 1025 (1034)
T KOG0204|consen 978 TPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAGLGGSKFSP 1025 (1034)
T ss_pred ecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeeccCcccccc
Confidence 999999999999999999999999999999999999988887765443
No 2
>KOG0202|consensus
Probab=100.00 E-value=1.3e-84 Score=695.27 Aligned_cols=482 Identities=32% Similarity=0.506 Sum_probs=408.6
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCC-CcEEEEE---echhhhhcccccccCCc-eecCCHHHHHHHHHHHHHHHhhcc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKG-GGYRSLP---TKVLPRSCAFIYGRDGN-LEKFTREMQDRLVRNVIEPMACDG 82 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~-~~~~~~~---~e~il~~c~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~a~~G 82 (591)
..+++++++||||+||+|||.+....+ .++.+|+ +|.|+++|++++..+|. ..||++..|+.+. +...+|+++|
T Consensus 461 ~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il-~~~~~~g~~g 539 (972)
T KOG0202|consen 461 RLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETIL-ANVYEMGSEG 539 (972)
T ss_pred HhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHH-HHHHHHhhcc
Confidence 345788999999999999954443322 2488998 99999999999887874 4999999999986 6788899999
Q ss_pred CeEEEEEEEecCC-CcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 83 LRTISIAYRDFVP-GKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 83 lR~l~~A~k~~~~-~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
||||++|+++.+. .+.+. +..+..++...|+||+|+|++|+.||+|+|++++|+.|+++||+|.|+|||+..|
T Consensus 540 LRvLalA~~~~~~~~~~~~------~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~T 613 (972)
T KOG0202|consen 540 LRVLALASKDSPGQVPDDQ------DLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKET 613 (972)
T ss_pred ceEEEEEccCCcccChhhh------hhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 9999999998874 11100 0011123456799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCc--eEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEE
Q psy8116 162 ARSIATKCGILKPGDD--FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVV 239 (591)
Q Consensus 162 a~~ia~~~gi~~~~~~--~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~v 239 (591)
|.+||+++|+...+++ .-+++|.+++++ ..+.++.......+|+|++|.+|.++|+. +|..+++|
T Consensus 614 A~AI~r~iGi~~~~ed~~~~~~TG~efD~l--------s~~~~~~~~~~~~vFaR~~P~HK~kIVea-----Lq~~geiv 680 (972)
T KOG0202|consen 614 AEAIAREIGIFSEDEDVSSMALTGSEFDDL--------SDEELDDAVRRVLVFARAEPQHKLKIVEA-----LQSRGEVV 680 (972)
T ss_pred HHHHHHHhCCCcCCccccccccchhhhhcC--------CHHHHHHHhhcceEEEecCchhHHHHHHH-----HHhcCCEE
Confidence 9999999999876663 346789988765 44556677788899999999999999999 57789999
Q ss_pred EEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy8116 240 AVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFI 319 (591)
Q Consensus 240 a~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~ 319 (591)
||+|||.||+|+||+||||||||.+|+|++|+|||+|+.||||++|+.|+++||.+|+||++|+.|+++.|+..+...++
T Consensus 681 AMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l 760 (972)
T KOG0202|consen 681 AMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFL 760 (972)
T ss_pred EecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HHHHHH
Q psy8116 320 GACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVV---FTLLFV 396 (591)
Q Consensus 320 ~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~---~~~~~~ 396 (591)
++.+..+.||+|+|+||+|+++|.+|+-+|+++||++++|++||++.+.++|+.+.+++++..|+|..... |...+.
T Consensus 761 ~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~ 840 (972)
T KOG0202|consen 761 TAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMY 840 (972)
T ss_pred HHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999998875443 222332
Q ss_pred hhcccCCCCCCCCCCCC-------------CCcchhhhHHHHHHHHHHhhhhhhccccCcccccc-cCccCHHHHHHHHH
Q psy8116 397 GDKLLDIPTGRGAEFGS-------------EPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFI 462 (591)
Q Consensus 397 ~~~~~~~~~~~~~~~~~-------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~ 462 (591)
+. --.+.......++. ......||.|.++|+.-+||.+|+++... .+|. ++|+|+||++++.+
T Consensus 841 ~~-~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~--slf~~~~~~N~~l~~ai~~ 917 (972)
T KOG0202|consen 841 GA-DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENK--SLFTMPPWSNRWLLWAIAL 917 (972)
T ss_pred cC-CCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCc--ceEEecccccHHHHHHHHH
Confidence 21 00000000000000 11134589999999999999999997653 4554 89999999999999
Q ss_pred HHHHHHHHHh--hccccccccCCChhHHHHHHHHHHHHHHHHHHHHhhccCc
Q psy8116 463 TAASQVFIIQ--FGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRK 512 (591)
Q Consensus 463 ~~~~~~~~v~--~~~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~ 512 (591)
++++++++++ +...+|++.+|++.+|+..+.+...+++.+|++|++.|+.
T Consensus 918 S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~ 969 (972)
T KOG0202|consen 918 SFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNY 969 (972)
T ss_pred HHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhc
Confidence 9999977654 4589999999999999999999999999999999998765
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.4e-76 Score=688.22 Aligned_cols=469 Identities=55% Similarity=0.872 Sum_probs=413.2
Q ss_pred CCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeE
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRT 85 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~ 85 (591)
++.++..+||+|+||+|+ ++++.++++|++|+ ||.|+++|+.+.+.+|+..++++ .++++ ++.+++|+++|+||
T Consensus 469 ~~~~~~~~pF~s~~k~ms-vv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i-~~~~~~~a~~G~Rv 545 (941)
T TIGR01517 469 EEKVVKIYPFNSERKFMS-VVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRC-ADVIEPLASDALRT 545 (941)
T ss_pred hchhccccccCCCCCeEE-EEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHH-HHHHHHHHhcCCEE
Confidence 355677899999999999 66666566788888 99999999988777888888887 66665 57889999999999
Q ss_pred EEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 86 ISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 86 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
+++|||+++.++. + ..+..|+||+|+|+++++||+||+++++|++|+++||+++|+|||+..||.++
T Consensus 546 l~~A~~~~~~~~~----------~---~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~i 612 (941)
T TIGR01517 546 ICLAYRDFAPEEF----------P---RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAI 612 (941)
T ss_pred EEEEEEecCcccc----------c---cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHH
Confidence 9999999865321 1 11234789999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC
Q psy8116 166 ATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245 (591)
Q Consensus 166 a~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg 245 (591)
|++|||.+++. .+++|.++... .++.+++...+..+|||++|+||.++|+.+ |..|++|+|+|||
T Consensus 613 A~~~GI~~~~~--~vi~G~~~~~l--------~~~el~~~i~~~~Vfar~sPe~K~~iV~~l-----q~~g~vVam~GDG 677 (941)
T TIGR01517 613 ARNCGILTFGG--LAMEGKEFRRL--------VYEEMDPILPKLRVLARSSPLDKQLLVLML-----KDMGEVVAVTGDG 677 (941)
T ss_pred HHHcCCCCCCc--eEeeHHHhhhC--------CHHHHHHHhccCeEEEECCHHHHHHHHHHH-----HHCCCEEEEECCC
Confidence 99999976443 57899988654 234566777888999999999999999995 5668999999999
Q ss_pred CCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC
Q psy8116 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQ 325 (591)
Q Consensus 246 ~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~ 325 (591)
.||+||||+||||||||.+|+|+||++||+++.||+|+++++++.+||++|+|++++++|.+++|+..+++.+++.++..
T Consensus 678 vNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~ 757 (941)
T TIGR01517 678 TNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS 757 (941)
T ss_pred CchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999988888
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy8116 326 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPT 405 (591)
Q Consensus 326 ~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 405 (591)
++|++++|+||+|+++|.+|+++|++++|++++|++||+.++++++++.++.++++++++++++.+++++.+..+++...
T Consensus 758 ~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (941)
T TIGR01517 758 TSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSG 837 (941)
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888776655554332
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhccccccccCCCh
Q psy8116 406 GRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFSTKSLTL 485 (591)
Q Consensus 406 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~F~~~~l~~ 485 (591)
+..... .....++|++|++|+++|+||.+++|+.+. .++|+++++|++++.++++++++|++++++++.+|++.|+++
T Consensus 838 ~~~~~~-~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~-~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~ 915 (941)
T TIGR01517 838 PDEITS-HQQGELNTIVFNTFVLLQLFNEINARKLYE-RNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSI 915 (941)
T ss_pred cccccc-cccchhhHHHHHHHHHHHHHHHHHHccCCc-ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCH
Confidence 110000 113567899999999999999999998764 377888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8116 486 EQWLWCLFFGIGTLLWGQVVTTVPT 510 (591)
Q Consensus 486 ~~w~~~l~~~~~~ll~~eiik~i~~ 510 (591)
.+|++|++++++.++|.++.|++|+
T Consensus 916 ~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 916 EQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999874
No 4
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=7.5e-75 Score=673.34 Aligned_cols=477 Identities=31% Similarity=0.475 Sum_probs=406.1
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhh-ccC
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMAC-DGL 83 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~-~Gl 83 (591)
+++.++.++||||+||||| ++++. ++++.+|+ ||.|+++|++++.++|...|++++.++++ ++.+++|++ +|+
T Consensus 418 ~~~~~~~~~pF~s~rK~ms-viv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i-~~~~~~~a~~~Gl 494 (917)
T TIGR01116 418 DKFKKLATLEFSRDRKSMS-VLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTI-LSVIKEMGTTKAL 494 (917)
T ss_pred hhcceeeecccChhhCeEE-EEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHH-HHHHHHHHhhcCC
Confidence 4567899999999999999 66654 46788888 99999999998887799999999988886 578999999 999
Q ss_pred eEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy8116 84 RTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR 163 (591)
Q Consensus 84 R~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~ 163 (591)
|||++|||+++.++.... ..+....+++|+||+|+|+++++||+|++++++|+.|+++||+++|+|||+..||.
T Consensus 495 Rvl~~A~k~~~~~~~~~~------~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~ 568 (917)
T TIGR01116 495 RCLALAFKDIPDPREEDL------LSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568 (917)
T ss_pred eEEEEEEEECCccccccc------cccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHH
Confidence 999999999875321100 01112335789999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCc--eEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEE
Q psy8116 164 SIATKCGILKPGDD--FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAV 241 (591)
Q Consensus 164 ~ia~~~gi~~~~~~--~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~ 241 (591)
++|+++|+..++.. ...++|.++..+ ..+...+...+..+|||++|+||.++|+.+ +..+++|+|
T Consensus 569 ~ia~~~gi~~~~~~v~~~~~~g~~l~~~--------~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l-----q~~g~~va~ 635 (917)
T TIGR01116 569 AICRRIGIFSPDEDVTFKSFTGREFDEM--------GPAKQRAACRSAVLFSRVEPSHKSELVELL-----QEQGEIVAM 635 (917)
T ss_pred HHHHHcCCCCCCccccceeeeHHHHhhC--------CHHHHHHhhhcCeEEEecCHHHHHHHHHHH-----HhcCCeEEE
Confidence 99999999865443 246788877553 123345556778899999999999999984 566899999
Q ss_pred ECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q psy8116 242 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGA 321 (591)
Q Consensus 242 iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~ 321 (591)
+|||.||+||||+|||||||| +|++.+|++||+++.||+|.+++++++|||++|+|++++++|.+++|+..+++.+++.
T Consensus 636 iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 714 (917)
T TIGR01116 636 TGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTA 714 (917)
T ss_pred ecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 999999999999999999999 8899999999999999999999999999999999999999999999999999999888
Q ss_pred ccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy8116 322 CAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLL 401 (591)
Q Consensus 322 ~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 401 (591)
++..+.|+++.|++|+|+++|.+|+++|+.++|++++|.+||+.+++++++++++.+|++.|++++++.++.+++.....
T Consensus 715 ~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 794 (917)
T TIGR01116 715 ALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLT 794 (917)
T ss_pred HHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 88888999999999999999999999999999999999999999999999999999999999999987655443321110
Q ss_pred CCCC--CC-----C--C----CCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccc-cCccCHHHHHHHHHHHHHH
Q psy8116 402 DIPT--GR-----G--A----EFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFITAASQ 467 (591)
Q Consensus 402 ~~~~--~~-----~--~----~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~ 467 (591)
+... +. + . ........++|++|++++++|+||.+|+|+.+ .++|+ ++++|++++.++++++++|
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~~~~~~~~~~l~ 872 (917)
T TIGR01116 795 HFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED--QSLLRMPPWVNKWLIGAICLSMALH 872 (917)
T ss_pred CcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc--ccccccCCccCHHHHHHHHHHHHHH
Confidence 1100 00 0 0 00012346789999999999999999999854 46776 7789999999999999999
Q ss_pred HHH--HhhccccccccCCChhHHHHHHHHHHHHHHHHHHHHhhc
Q psy8116 468 VFI--IQFGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVP 509 (591)
Q Consensus 468 ~~~--v~~~~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i~ 509 (591)
+++ +++++.+|++.|+++.+|+++++++++.++++|+.|++.
T Consensus 873 ~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 873 FLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 877 566789999999999999999999999999999999874
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.2e-74 Score=674.19 Aligned_cols=482 Identities=26% Similarity=0.409 Sum_probs=398.2
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCC-cEEEEE---echhhhhcccccccCC-ceecCCHHHHHHHHHHHHHHHhhcc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGG-GYRSLP---TKVLPRSCAFIYGRDG-NLEKFTREMQDRLVRNVIEPMACDG 82 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~-~~~~~~---~e~il~~c~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~a~~G 82 (591)
.++.++.+|||||+||||| ++++.+++ +|++|+ ||.|+++|+.+...+| +..|+++++++++ .+.+++||++|
T Consensus 523 ~~~~~~~~~pFds~rK~ms-vv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i-~~~~~~~a~~G 600 (1053)
T TIGR01523 523 AQFEFIAEFPFDSEIKRMA-SIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELI-IANMESLAAEG 600 (1053)
T ss_pred cccceEEEeccCCCCCeEE-EEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHH-HHHHHHHHhcC
Confidence 4578899999999999999 66665444 588998 9999999998766555 6789999999887 57899999999
Q ss_pred CeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy8116 83 LRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTA 162 (591)
Q Consensus 83 lR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta 162 (591)
+||||+|||+++.++...+. .+ ....+++++|+||+|+|+++++||+|++++++|+.|+++||+++|+|||+..||
T Consensus 601 lRvLa~A~r~l~~~~~~~~~--~~--~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA 676 (1053)
T TIGR01523 601 LRVLAFASKSFDKADNNDDQ--LK--NETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETA 676 (1053)
T ss_pred CeEEEEEEEECCchhccchh--hh--ccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 99999999998764321000 00 001123567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCC--------ceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCC
Q psy8116 163 RSIATKCGILKPGD--------DFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSD 234 (591)
Q Consensus 163 ~~ia~~~gi~~~~~--------~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~ 234 (591)
.++|+++||..++. ...+++|.++..+ .++.+++......+|||++|+||.++|+.+ +.
T Consensus 677 ~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l--------~~~~l~~~~~~~~V~ar~sP~~K~~iV~~l-----q~ 743 (1053)
T TIGR01523 677 KAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL--------SDEEVDDLKALCLVIARCAPQTKVKMIEAL-----HR 743 (1053)
T ss_pred HHHHHHcCCCCccccccccccccceeeehHHhhhc--------CHHHHHHHhhcCeEEEecCHHHHHHHHHHH-----Hh
Confidence 99999999975320 2368899888754 223445556677899999999999999995 55
Q ss_pred CCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy8116 235 SREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAV 314 (591)
Q Consensus 235 ~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~ 314 (591)
.+++|+|+|||.||+|||++||||||||.+|++++|++||+++.+|+|.++++++.+||++|+|++|++.|.+++|+..+
T Consensus 744 ~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i 823 (1053)
T TIGR01523 744 RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEA 823 (1053)
T ss_pred cCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 69999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccC-----CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy8116 315 IVAFIGACAV-----QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTV 389 (591)
Q Consensus 315 ~~~~~~~~~~-----~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~ 389 (591)
++.+++.++. .+.||+++|+||+|+++|.+|+++|++|||++++|.+||+.++++++++.++..++..+++.++.
T Consensus 824 ~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~ 903 (1053)
T TIGR01523 824 ILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGS 903 (1053)
T ss_pred HHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHH
Confidence 9988877763 24799999999999999999999999999999999999999999999999999999999988776
Q ss_pred HHHHHHHhhcccC--C-----CCCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccc--------------
Q psy8116 390 VFTLLFVGDKLLD--I-----PTGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-------------- 448 (591)
Q Consensus 390 ~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-------------- 448 (591)
.+..+++....++ . ...++.+. .....++|++|.+++++|+++.+++|+.+. ++|+
T Consensus 904 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~--~~~~~~~~~~~~~~~~~~ 980 (1053)
T TIGR01523 904 CLASFTGILYGFGSGNLGHDCDAHYHAGC-NDVFKARSAAFATMTFCALILAVEVKDFDN--SFFNLHGIPDGDSNFKEF 980 (1053)
T ss_pred HHHHHHHHHHhccCccccccccccccccc-cchhhhHHHHHHHHHHHHHHHHHHHhcCch--hhhhcCcccccccccccc
Confidence 6655442211110 0 00011100 123457899999999999999999998653 3332
Q ss_pred --cCccCHHHHHHHHHHHHHHHHHHh--hccc-cccccCCChhHHHHHHHHHHHHHHHHHHHHhhccCc
Q psy8116 449 --GFFSNPIFYSIWFITAASQVFIIQ--FGRE-AFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRK 512 (591)
Q Consensus 449 --~~~~n~~~~~~~~~~~~~~~~~v~--~~~~-~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~ 512 (591)
+.|+|+++++++++++++++++++ +.+. +|++.|+++ +|++++.++++.+++.|+.|++.|++
T Consensus 981 ~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 981 FHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred ccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 368999999888888888876654 4554 999999996 89999999999999999999986544
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.6e-74 Score=672.99 Aligned_cols=481 Identities=27% Similarity=0.391 Sum_probs=395.4
Q ss_pred cCCcceeeccCCcccceeeeEEeeCC---CCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRK---GGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACD 81 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~---~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 81 (591)
+++.++..+||||+||||+ +++... +++|++|+ ||.|+++|++++ .+|+..+++++.++++ ++.+++|+++
T Consensus 446 ~~~~~v~~~pF~s~rK~m~-~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~-~~~~~~~a~~ 522 (997)
T TIGR01106 446 ERNPKVVEIPFNSTNKYQL-SIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAF-QNAYLELGGL 522 (997)
T ss_pred hhCceeEEeccCCCCceEE-EEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHH-HHHHHHHHhc
Confidence 4677899999999999999 555432 34688888 999999999887 4788899999988876 5789999999
Q ss_pred cCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 82 GLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 82 GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
|+|||++|||+++.+++.... ..+.+..+.+|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..|
T Consensus 523 GlRvla~A~k~l~~~~~~~~~-----~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~t 597 (997)
T TIGR01106 523 GERVLGFCHLYLPDEQFPEGF-----QFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 597 (997)
T ss_pred CCEEEEEEEeecCcccccccc-----cccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 999999999998764321100 000111234589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCc----------------------eEEecchhhHHhhhcccchhhHHHHhhhcCcc--eEEEecCh
Q psy8116 162 ARSIATKCGILKPGDD----------------------FLILEGKEFNRRVRDANGDVQQHLLDKVWPRL--RVLARSSP 217 (591)
Q Consensus 162 a~~ia~~~gi~~~~~~----------------------~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~~r~sp 217 (591)
|.++|+++|+..++.. ..+++|.+++.+. ++.+++...+. .||||++|
T Consensus 598 a~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~--------~~el~~~~~~~~~~VfaR~sP 669 (997)
T TIGR01106 598 AKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT--------SEQLDEILKYHTEIVFARTSP 669 (997)
T ss_pred HHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCC--------HHHHHHHHHhcCCEEEEECCH
Confidence 9999999999764321 2678888886642 23344444443 49999999
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~ 297 (591)
+||.++|+.+ +..|++|+|+|||.||+||||+||||||||++|+|++|++||+++.||+|++++++++|||++|+
T Consensus 670 eqK~~IV~~l-----q~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ 744 (997)
T TIGR01106 670 QQKLIIVEGC-----QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 744 (997)
T ss_pred HHHHHHHHHH-----HHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHH
Confidence 9999999995 56789999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCC-CCCCCCHHHH
Q psy8116 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR-TKPLISKTMM 376 (591)
Q Consensus 298 ~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~-~~~~i~~~~~ 376 (591)
|++|+++|++++|+..+++.+++.++..++|++++|+||+|+++|.+|+++|++|||++++|.+||+.+ .++++++.++
T Consensus 745 ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~ 824 (997)
T TIGR01106 745 NLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLI 824 (997)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999974 6789999888
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhc--------ccCCCCCCC------------CCCCCC-----CcchhhhHHHHHHHHH
Q psy8116 377 KNIL-GQAIYQLTVVFTLLFVGDK--------LLDIPTGRG------------AEFGSE-----PTQHFTVIFNTFVFMT 430 (591)
Q Consensus 377 ~~~~-~~~i~~~~~~~~~~~~~~~--------~~~~~~~~~------------~~~~~~-----~~~~~t~~f~~~v~~~ 430 (591)
..++ ..|+++++..|+.+++... .+++...+. ..+... ...++|++|++++++|
T Consensus 825 ~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q 904 (997)
T TIGR01106 825 SMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQ 904 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHH
Confidence 7754 4577777766655543221 111100000 000000 0146899999999999
Q ss_pred HhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHh--hccccccccCCChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 431 LFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQ--FGREAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 431 ~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~--~~~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
+||.+|||+.+ .++|+..++|++++.++++.+++++++++ +.+.+|++.++++.+|+++++++++.++++++.|++
T Consensus 905 ~~~~~~~R~~~--~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~ 982 (997)
T TIGR01106 905 WADLIICKTRR--NSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLI 982 (997)
T ss_pred HHHHHHhccCc--ccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999843 46776448999998888888887766544 458999999999999999999999999999999988
Q ss_pred ccC
Q psy8116 509 PTR 511 (591)
Q Consensus 509 ~~~ 511 (591)
.++
T Consensus 983 ~r~ 985 (997)
T TIGR01106 983 IRR 985 (997)
T ss_pred HHh
Confidence 754
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-72 Score=651.87 Aligned_cols=454 Identities=33% Similarity=0.507 Sum_probs=385.2
Q ss_pred CCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeE
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRT 85 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~ 85 (591)
++.++.+|||||+||||| ++++.++|+|.+|+ ||+|+++|+.. |+..+++++.++.+ .+..++|+++||||
T Consensus 439 ~~~~~~~~PFdS~rKrMs-viv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~-~~~~~~la~~glRv 512 (917)
T COG0474 439 EYPILAEIPFDSERKRMS-VIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTL-EEAVKELASEGLRV 512 (917)
T ss_pred hcceeEEecCCCCceEEE-EEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHH-HHHHHHHHHHHHHH
Confidence 346799999999999999 77776667799999 99999999976 77888999999887 57899999999999
Q ss_pred EEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 86 ISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 86 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
|++|||.++..+ ...+. +++|+||+|+|+++++||+|++++++|+.|++|||++||+||||..||.+|
T Consensus 513 la~A~k~~~~~~-----------~~~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aI 580 (917)
T COG0474 513 LAVAYKKLDRAE-----------KDDEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAI 580 (917)
T ss_pred HHHHhccCCccc-----------ccchh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHH
Confidence 999999776542 11111 678999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC
Q psy8116 166 ATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245 (591)
Q Consensus 166 a~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg 245 (591)
|++||+.......++++|.+++... ++.+.+...+..||||++|+||.++|+.+ |..|++|+|||||
T Consensus 581 a~~~Gi~~~~~~~~vi~G~el~~l~--------~~el~~~~~~~~VfARvsP~qK~~IV~~l-----q~~g~vVamtGDG 647 (917)
T COG0474 581 AKECGIEAEAESALVIDGAELDALS--------DEELAELVEELSVFARVSPEQKARIVEAL-----QKSGHVVAMTGDG 647 (917)
T ss_pred HHHcCCCCCCCceeEeehHHhhhcC--------HHHHHHHhhhCcEEEEcCHHHHHHHHHHH-----HhCCCEEEEeCCC
Confidence 9999997643335689999988753 23445555667799999999999999994 6679999999999
Q ss_pred CCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC
Q psy8116 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQ 325 (591)
Q Consensus 246 ~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~ 325 (591)
.||+||||+||||||||+.|+|++|+|||+++.|++|..+..+++|||++|.|++|++.|.+++|+..+++.+++.++..
T Consensus 648 vNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~ 727 (917)
T COG0474 648 VNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNL 727 (917)
T ss_pred chhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988887776
Q ss_pred C-CchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 326 D-SPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 326 ~-~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
+ .|+++.|+||+|+++|.+|+++|+.++|+.+.|.+||+++++++++++.++++++...++..+++++.|.........
T Consensus 728 ~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~ 807 (917)
T COG0474 728 FFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIA 807 (917)
T ss_pred ccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6 999999999999999999999999999999999999999999999999999988887777776666555443322211
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccc-cCccCHHHHHHHHHHHHHHHHHHhhc--c-ccccc
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFITAASQVFIIQFG--R-EAFST 480 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~~~--~-~~F~~ 480 (591)
...+... ......|+.|.+++++|+++.+++|..+ .+++. .++.|+.++.+++++++++++..+++ . ..|+.
T Consensus 808 ~~~~~~~--~~~~~~t~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~ 883 (917)
T COG0474 808 NTLGLDL--FQALLQTTAFTVLVLIQLLLTLAVRSRG--RPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQP 883 (917)
T ss_pred cccchhh--HHHHHHHHHHHHHHHHHHHHHHHHhccc--cchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccC
Confidence 1111000 1345789999999999999999999764 24554 46899999998888888887766543 4 68999
Q ss_pred cCCChhHHHHHHHHHHH
Q psy8116 481 KSLTLEQWLWCLFFGIG 497 (591)
Q Consensus 481 ~~l~~~~w~~~l~~~~~ 497 (591)
.+++..+|++++.+...
T Consensus 884 ~~~~~~~~~~~~~~~~~ 900 (917)
T COG0474 884 TPLSLFEWLIAIAVALL 900 (917)
T ss_pred CCCcHHHHHHHHHHHHH
Confidence 99998889988877633
No 8
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.2e-71 Score=642.93 Aligned_cols=450 Identities=31% Similarity=0.511 Sum_probs=397.7
Q ss_pred CCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeE
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRT 85 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~ 85 (591)
.+.++.++||+|+||||++++....++++++|+ ||.|+++|+.+...+|...+++++.++++ ++.+++|+++|+||
T Consensus 427 ~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i-~~~~~~~a~~G~rv 505 (884)
T TIGR01522 427 TYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVI-QEEAAEMASAGLRV 505 (884)
T ss_pred hCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHH-HHHHHHHHhcCCEE
Confidence 567889999999999999444443456788888 99999999998877888899999888876 57889999999999
Q ss_pred EEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 86 ISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 86 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
+++|||+++ +||+|+|+++++||+||+++++|+.|+++|++++|+|||+..||.++
T Consensus 506 l~~A~~~~~------------------------~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~i 561 (884)
T TIGR01522 506 IAFASGPEK------------------------GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSI 561 (884)
T ss_pred EEEEEEcCC------------------------CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 999998751 37999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC
Q psy8116 166 ATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245 (591)
Q Consensus 166 a~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg 245 (591)
|+++|+....+. .++|.++... ..+.+++...+..+|||++|+||..+|+.+ +..+++|+|+|||
T Consensus 562 a~~~Gi~~~~~~--~v~g~~l~~~--------~~~~l~~~~~~~~Vfar~~P~~K~~iv~~l-----q~~g~~v~mvGDG 626 (884)
T TIGR01522 562 ARRLGMPSKTSQ--SVSGEKLDAM--------DDQQLSQIVPKVAVFARASPEHKMKIVKAL-----QKRGDVVAMTGDG 626 (884)
T ss_pred HHHcCCCCCCCc--eeEhHHhHhC--------CHHHHHHHhhcCeEEEECCHHHHHHHHHHH-----HHCCCEEEEECCC
Confidence 999999764433 5688887653 234566677888999999999999999995 5568999999999
Q ss_pred CCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC
Q psy8116 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQ 325 (591)
Q Consensus 246 ~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~ 325 (591)
.||+||+++||||||||..++++++++||+++.||+|+.+.+++++||++|+|+++++.|.++.|+..+++.+++.++..
T Consensus 627 vND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 706 (884)
T TIGR01522 627 VNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGF 706 (884)
T ss_pred cccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcC
Confidence 99999999999999999779999999999999999999999999999999999999999999999999988888888888
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy8116 326 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPT 405 (591)
Q Consensus 326 ~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 405 (591)
++|++++|+||+|+++|.+|+++|++|||++++|++||++++++++++.++.+++.+|++++++.+++++.. +. .
T Consensus 707 ~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~---~ 781 (884)
T TIGR01522 707 PNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVRE--MQ---D 781 (884)
T ss_pred CCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHH--Hc---C
Confidence 999999999999999999999999999999999999999999999999999999999999887766554432 11 0
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccc-cCccCHHHHHHHHHHHHHHHHHHh--hccccccccC
Q psy8116 406 GRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFE-GFFSNPIFYSIWFITAASQVFIIQ--FGREAFSTKS 482 (591)
Q Consensus 406 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~~v~--~~~~~F~~~~ 482 (591)
+ .....++|++|++|+++|+||.+|+|+.. .++|+ ++++|++++.++++++++|+++++ +++.+|++.|
T Consensus 782 ~------~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~ 853 (884)
T TIGR01522 782 G------VITARDTTMTFTCFVFFDMFNALACRSQT--KSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEA 853 (884)
T ss_pred C------cchhhHHHHHHHHHHHHHHHHHHHHccCC--ccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 01245789999999999999999999853 47776 788999999999999999987775 5689999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8116 483 LTLEQWLWCLFFGIGTLLWGQVVTTVPTR 511 (591)
Q Consensus 483 l~~~~w~~~l~~~~~~ll~~eiik~i~~~ 511 (591)
+++.+|++|++++++.++++|+.|++.++
T Consensus 854 l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 854 LSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999988643
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=6.2e-69 Score=619.84 Aligned_cols=458 Identities=20% Similarity=0.275 Sum_probs=373.8
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+.+.++.++||+|+||+|+ ++++..+|++++|+ ||.|+++|+++.. +|+..+++++.++++ .+.+++++.+|+|
T Consensus 437 ~~~~~~~~~pF~s~~k~ms-~v~~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i-~~~~~~~a~~G~r 513 (903)
T PRK15122 437 AGYRKVDELPFDFVRRRLS-VVVEDAQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERL-LALAEAYNADGFR 513 (903)
T ss_pred hcCceEEEeeeCCCcCEEE-EEEEcCCCcEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHH-HHHHHHHHhCCCE
Confidence 4577889999999999999 66666567788887 9999999998764 678889999888886 4678999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|+++|||+++.++.. . ...+..|+||+|+|+++++||+|||++++|++|+++||+++|+|||+..||.+
T Consensus 514 vlavA~k~~~~~~~~----------~-~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a 582 (903)
T PRK15122 514 VLLVATREIPGGESR----------A-QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582 (903)
T ss_pred EEEEEEeccCccccc----------c-ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 999999998653210 0 01123478999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+|+++||.. + -+++|.++..+ ..+.+++...+..+|+|++|+||.++|+.+ |..|++|+|+||
T Consensus 583 IA~~lGI~~--~--~vi~G~el~~~--------~~~el~~~v~~~~VfAr~sPe~K~~iV~~L-----q~~G~vVamtGD 645 (903)
T PRK15122 583 ICREVGLEP--G--EPLLGTEIEAM--------DDAALAREVEERTVFAKLTPLQKSRVLKAL-----QANGHTVGFLGD 645 (903)
T ss_pred HHHHcCCCC--C--CccchHhhhhC--------CHHHHHHHhhhCCEEEEeCHHHHHHHHHHH-----HhCCCEEEEECC
Confidence 999999952 2 26789888764 234566777888999999999999999994 567999999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+|||++|||||||| +|+|+||++||+|+.||+|+.+++++++||.+|+|++|++.|.++.|+..++..+++.++.
T Consensus 646 GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~ 724 (903)
T PRK15122 646 GINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI 724 (903)
T ss_pred CchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 999999999999999999 8999999999999999999999999999999999999999999999998888777776666
Q ss_pred CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 325 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
.+.|+++.|+||+|+++|+ |+++|++|||++++| +||++++.+++++.++...+..++ ..+..|+++++. ++.
T Consensus 725 ~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~---~~~- 797 (903)
T PRK15122 725 PFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSI-FDITTFALMWFV---FAA- 797 (903)
T ss_pred ccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHH---hcc-
Confidence 6789999999999999995 999999999999999 999999999999877642222222 222223222211 110
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHH--hh--ccccccc
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFII--QF--GREAFST 480 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v--~~--~~~~F~~ 480 (591)
+ .. . ..+..+|..|.+++++|+++.+++|+.+. + +|+|++.+..++++++++++++ ++ .+.+|++
T Consensus 798 -~--~~-~-~~~~~~t~~f~~l~~~q~~~~~~~R~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~ 866 (903)
T PRK15122 798 -N--SV-E-MQALFQSGWFIEGLLSQTLVVHMLRTQKI--P----FIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGL 866 (903)
T ss_pred -C--cH-h-hhhhhHHHHHHHHHHHHHHHHHhhCcCCC--C----cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC
Confidence 1 00 0 01134578899999999999999997532 3 3456665555555666665443 43 4789999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHhhccCcccc
Q psy8116 481 KSLTLEQWLWCLFFGIGTLLWGQVVTTVPTRKLPK 515 (591)
Q Consensus 481 ~~l~~~~w~~~l~~~~~~ll~~eiik~i~~~~~~~ 515 (591)
.++++.+|++++.+++..+++.|+.|.+..+++++
T Consensus 867 ~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~~~ 901 (903)
T PRK15122 867 EPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRFGQ 901 (903)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999776665544
No 10
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.7e-66 Score=598.73 Aligned_cols=452 Identities=17% Similarity=0.253 Sum_probs=360.1
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+.+.++.++||||+||+|+ ++++.+++++.+|+ ||.|+++|+++.. +|+..+++++.++++ .+.+++++++|+|
T Consensus 439 ~~~~~~~~~pFds~~k~ms-vvv~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i-~~~~~~~a~~G~r 515 (902)
T PRK10517 439 SRWQKIDEIPFDFERRRMS-VVVAENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRI-KRVTDTLNRQGLR 515 (902)
T ss_pred hcCceEEEeeeCCCcceEE-EEEEECCCeEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHH-HHHHHHHHhcCCE
Confidence 4677889999999999999 66665566777887 9999999998764 677889999888876 5788999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|+++|||+++.++. .. +...|+|++|+|+++++||+||+++++|++|+++||+++|+|||+..||.+
T Consensus 516 vlavA~k~~~~~~~-----------~~--~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~ 582 (902)
T PRK10517 516 VVAVATKYLPAREG-----------DY--QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAK 582 (902)
T ss_pred EEEEEEecCCcccc-----------cc--ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 99999998865321 01 111368999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+|+++||.. + -+++|.+++.+ ..+.+++...+..+|+|++|+||.++|+.+ |..|++|+|+||
T Consensus 583 IA~~lGI~~--~--~v~~G~el~~l--------~~~el~~~~~~~~VfAr~sPe~K~~IV~~L-----q~~G~vVam~GD 645 (902)
T PRK10517 583 VCHEVGLDA--G--EVLIGSDIETL--------SDDELANLAERTTLFARLTPMHKERIVTLL-----KREGHVVGFMGD 645 (902)
T ss_pred HHHHcCCCc--c--CceeHHHHHhC--------CHHHHHHHHhhCcEEEEcCHHHHHHHHHHH-----HHCCCEEEEECC
Confidence 999999942 2 36788888754 234566777888999999999999999994 567999999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+||||+|||||||| +|+|+||++||+|+.||+|..|++++++||++|+|++|+++|.++.|+..++..+++.++.
T Consensus 646 GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~ 724 (902)
T PRK10517 646 GINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL 724 (902)
T ss_pred CcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999 8999999999999999999999999999999999999999999999999988888777666
Q ss_pred CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 325 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
.+.|++|.|+||+|+++| +++++|++|||++++|++||+ ++... ....++..|++.+++.+..++.....++.
T Consensus 725 ~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 797 (902)
T PRK10517 725 PFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPAD----LGRFMVFFGPISSIFDILTFCLMWWVFHA- 797 (902)
T ss_pred hhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHccc-
Confidence 568999999999999999 689999999999999999886 22222 33334555555444333333222111111
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHH--h--hccccccc
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFII--Q--FGREAFST 480 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v--~--~~~~~F~~ 480 (591)
..+ . ..+..++..|.+++++|+++.+++|+.+. ++|.|++.+..++.+++++++.+ + +.+.+|++
T Consensus 798 ---~~~-~-~~~~~~~~~F~~~~~~q~~~~~~~R~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 866 (902)
T PRK10517 798 ---NTP-E-TQTLFQSGWFVVGLLSQTLIVHMIRTRRI------PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQL 866 (902)
T ss_pred ---cch-h-hHhHHHHHHHHHHHHHHHHHHHhhccCCC------CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCC
Confidence 000 0 00123456699999999999999997532 34577777777766776665444 3 34789999
Q ss_pred cCCC--hhHHHHHHHHHHHHHHHHHHHHhhccCcc
Q psy8116 481 KSLT--LEQWLWCLFFGIGTLLWGQVVTTVPTRKL 513 (591)
Q Consensus 481 ~~l~--~~~w~~~l~~~~~~ll~~eiik~i~~~~~ 513 (591)
.+++ +..|++++.++.. ++.|+.|....+++
T Consensus 867 ~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 867 QALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred cCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 9999 5667776666655 66888887755544
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=7.6e-66 Score=593.55 Aligned_cols=453 Identities=21% Similarity=0.277 Sum_probs=361.0
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
..+.++.++||||+||+|+ ++++.+++.+.+|+ ||.|+++|+++.. +|...+++++.++++ ++.+++|+++|+|
T Consensus 404 ~~~~~~~~~pF~s~~k~ms-~~v~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i-~~~~~~~a~~G~r 480 (867)
T TIGR01524 404 SRWKKVDEIPFDFDRRRLS-VVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSEL-QDMTAEMNRQGIR 480 (867)
T ss_pred hcCceEEEeccCCCcCEEE-EEEEcCCceEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHH-HHHHHHHHhcCCE
Confidence 4677889999999999999 66665555577777 9999999998754 677889998888876 5788999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|+++|||+++.++. .. .++.|+||+|+|+++++||+||+++++|++|+++||+++|+|||+..||.+
T Consensus 481 vlavA~~~~~~~~~-----------~~--~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~a 547 (867)
T TIGR01524 481 VIAVATKTLKVGEA-----------DF--TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTAR 547 (867)
T ss_pred EEEEEEeccCcccc-----------cc--cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 99999999865421 00 111267999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+|+++||... -+++|.++... ..+.+.+...+..+|+|++|+||.++|+.+ |..|++|+|+||
T Consensus 548 IA~~lGI~~~----~v~~g~~l~~~--------~~~el~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~vVam~GD 610 (867)
T TIGR01524 548 ICQEVGIDAN----DFLLGADIEEL--------SDEELARELRKYHIFARLTPMQKSRIIGLL-----KKAGHTVGFLGD 610 (867)
T ss_pred HHHHcCCCCC----CeeecHhhhhC--------CHHHHHHHhhhCeEEEECCHHHHHHHHHHH-----HhCCCEEEEECC
Confidence 9999999532 25778887653 234566677888999999999999999994 667999999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+|||++|||||||| +|+|+||++||+|+.||+|+.+++++++||++|+|++|+++|+++.|+..++..+++.++.
T Consensus 611 GvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~ 689 (867)
T TIGR01524 611 GINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI 689 (867)
T ss_pred CcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 999999999999999999 8999999999999999999999999999999999999999999999999988888777776
Q ss_pred CCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy8116 325 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIP 404 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 404 (591)
.+.|+++.|+||+|+++| +|+++|++|||++++|.+||+ ++.+. +...++..|++.+++.+..++.....+..
T Consensus 690 ~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 762 (867)
T TIGR01524 690 PFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKG----MGRFMLCIGPVSSIFDIATFLLMWFVFSA- 762 (867)
T ss_pred hhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhh----HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 678999999999999999 799999999999999976554 55543 33445555555444333332221111110
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhc----cccccc
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFG----REAFST 480 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~----~~~F~~ 480 (591)
.+ . ......+|..|.+++++|+++.+++|+.+. ++|.|++.+..+++++++++++++.+ +.+|++
T Consensus 763 ~~--~---~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~------~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~ 831 (867)
T TIGR01524 763 NT--V---EEQALFQSGWFVVGLLSQTLVVHMIRTEKI------PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGL 831 (867)
T ss_pred cc--h---hhhhHHHHHHHHHHHHHHHHHHHhhCcCCC------CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhcc
Confidence 00 0 011234688899999999999999997531 34578888887777887776665433 679999
Q ss_pred cCCCh--hHHHHHHHHHHHHHHHHHHHHhhccCccc
Q psy8116 481 KSLTL--EQWLWCLFFGIGTLLWGQVVTTVPTRKLP 514 (591)
Q Consensus 481 ~~l~~--~~w~~~l~~~~~~ll~~eiik~i~~~~~~ 514 (591)
.++++ ..|++++.+++. ++.++.|.+..++++
T Consensus 832 ~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~~~~ 865 (867)
T TIGR01524 832 VSLPLSYFPWLIAILVGYM--ATMQLVKTFYIRRFG 865 (867)
T ss_pred ccCCccHHHHHHHHHHHHH--HHHHHHHHHHHHhcc
Confidence 98854 566666665554 678898877655544
No 12
>KOG0203|consensus
Probab=100.00 E-value=4.5e-67 Score=559.23 Aligned_cols=481 Identities=28% Similarity=0.425 Sum_probs=397.3
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCC---CcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhc
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKG---GGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACD 81 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~---~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 81 (591)
+...++.+.||||.+|+.- .+++.++ .++.+.+ ||.++++|+.+.- +|+..|++++.++.. .+..+++...
T Consensus 468 ~~~~kv~eipfNSt~Kyql-sih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f-~~ay~~lg~~ 544 (1019)
T KOG0203|consen 468 ERNPKVAEIPFNSTNKYQL-SIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAF-QEAYLELGGL 544 (1019)
T ss_pred HhhHHhhcCCcccccceEE-EEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHH-HHHHHHhhhc
Confidence 4567889999999999987 8887655 2455544 9999999999876 899999999888876 5788999999
Q ss_pred cCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy8116 82 GLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 82 GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t 161 (591)
|-||++||++.++.+++.....-. .+.-+.--.+|.|+|++++-||+|..+|+++.+|+.|||+|.|+|||++.|
T Consensus 545 GerVlgF~~~~l~~~~~p~~~~f~-----~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiT 619 (1019)
T KOG0203|consen 545 GERVLGFCDLELPDEKFPRGFQFD-----TDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 619 (1019)
T ss_pred chHHHHHHHHhcchhcCCCceEee-----cCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccch
Confidence 999999999999866532111100 111122245899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC----------------------ceEEecchhhHHhhhcccchhhHHHHhhhcCc--ceEEEecCh
Q psy8116 162 ARSIATKCGILKPGD----------------------DFLILEGKEFNRRVRDANGDVQQHLLDKVWPR--LRVLARSSP 217 (591)
Q Consensus 162 a~~ia~~~gi~~~~~----------------------~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~--~~v~~r~sp 217 (591)
|+++|++.||...+. ...++.|.++.+ ...+.++++..+ -.||||.||
T Consensus 620 AkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~--------~~~~qld~il~nh~eIVFARTSP 691 (1019)
T KOG0203|consen 620 AKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD--------MSSEQLDELLQNHQEIVFARTSP 691 (1019)
T ss_pred hhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc--------cCHHHHHHHHHhCCceEEEecCc
Confidence 999999999865422 223344444332 234455554432 359999999
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 297 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~ 297 (591)
+||..+|+. .|..|++|+++|||.||.||||+||||||||.+|+|++|+|||+|+.||||.+|+..+++||.+|+
T Consensus 692 qQKLiIVe~-----cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFD 766 (1019)
T KOG0203|consen 692 QQKLIIVEG-----CQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 766 (1019)
T ss_pred cceEEeEhh-----hhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhh
Confidence 999999998 688899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCC-CCCCCCCHHHH
Q psy8116 298 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYG-RTKPLISKTMM 376 (591)
Q Consensus 298 ~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~-~~~~~i~~~~~ 376 (591)
|++|.+.|.++.|+..+.+.+++.++..|.|+..+++|.+++.+|..|+++||+|+|+.++|+|+|+. +++.|+|.+.+
T Consensus 767 NLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi 846 (1019)
T KOG0203|consen 767 NLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLI 846 (1019)
T ss_pred hHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 77889988876
Q ss_pred H-HHHHHHHHHHHHHHHHHHHh--------------------hcccCCCCCCCCCCCCCC-----cchhhhHHHHHHHHH
Q psy8116 377 K-NILGQAIYQLTVVFTLLFVG--------------------DKLLDIPTGRGAEFGSEP-----TQHFTVIFNTFVFMT 430 (591)
Q Consensus 377 ~-~~~~~~i~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~-----~~~~t~~f~~~v~~~ 430 (591)
. .++..|.+|++..|+.+|.. ...-|+.+++|..|..+. .+.+|..|.++|++|
T Consensus 847 ~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q 926 (1019)
T KOG0203|consen 847 SYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQ 926 (1019)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHh
Confidence 5 56666899998888877641 122345666666665432 234688999999999
Q ss_pred HhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhc--cccccccCCChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 431 LFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFG--REAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 431 ~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~--~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
+++++.|.+.+ .++|+.-++|+.+++.++..+++..++.+.+ ...|++.|+.+..|+..+.+++..++.+|+.|++
T Consensus 927 ~adLii~KTRR--nSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~ 1004 (1019)
T KOG0203|consen 927 WADLIICKTRR--NSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLF 1004 (1019)
T ss_pred HhhHHhhhcch--hHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHh
Confidence 99999987644 3678766999999888877777666555444 5689999999988888888999999999999988
Q ss_pred ccC
Q psy8116 509 PTR 511 (591)
Q Consensus 509 ~~~ 511 (591)
-|+
T Consensus 1005 IR~ 1007 (1019)
T KOG0203|consen 1005 IRR 1007 (1019)
T ss_pred hhh
Confidence 655
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=4.8e-62 Score=573.34 Aligned_cols=440 Identities=22% Similarity=0.275 Sum_probs=342.5
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
.++.++..|||||++|||||++....++++.+|+ ||.|+++|+.. . . .++ +++.+++|+++|+|
T Consensus 550 ~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~----~----~----p~~-~~~~~~~~a~~G~R 616 (1054)
T TIGR01657 550 QELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE----T----V----PSD-YQEVLKSYTREGYR 616 (1054)
T ss_pred ceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc----C----C----Chh-HHHHHHHHHhcCCE
Confidence 5678899999999999999444433345678888 99999999841 1 1 122 35678999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
|||+|||++++.+.+ .....+++++|+||+|+|+++++||+||+++++|+.|++|||+++|+|||+..||.+
T Consensus 617 VLalA~k~l~~~~~~--------~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~ 688 (1054)
T TIGR01657 617 VLALAYKELPKLTLQ--------KAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVH 688 (1054)
T ss_pred EEEEEEeecCccchh--------hhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 999999998742210 011124578899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCc---------------------------------------------------eEEecchhhHHhhhcc
Q psy8116 165 IATKCGILKPGDD---------------------------------------------------FLILEGKEFNRRVRDA 193 (591)
Q Consensus 165 ia~~~gi~~~~~~---------------------------------------------------~i~l~g~~~~~~~~~~ 193 (591)
+|+++||..+++. .++++|+++.....
T Consensus 689 iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~-- 766 (1054)
T TIGR01657 689 VARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQA-- 766 (1054)
T ss_pred HHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHH--
Confidence 9999999765422 13445555443211
Q ss_pred cchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcc
Q psy8116 194 NGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEAS 273 (591)
Q Consensus 194 ~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aa 273 (591)
...+.+++...+..||||++|+||.++|+. +|..|++|+|+|||+||+||||+||||||||++ | |..||
T Consensus 767 ---~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~-----lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~--d-as~AA 835 (1054)
T TIGR01657 767 ---HSPELLLRLLSHTTVFARMAPDQKETLVEL-----LQKLDYTVGMCGDGANDCGALKQADVGISLSEA--E-ASVAA 835 (1054)
T ss_pred ---hhHHHHHHHHhcCeEEEecCHHHHHHHHHH-----HHhCCCeEEEEeCChHHHHHHHhcCcceeeccc--c-ceeec
Confidence 122456677788899999999999999999 466799999999999999999999999999943 4 45899
Q ss_pred cccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCC
Q psy8116 274 DIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEM 353 (591)
Q Consensus 274 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~ 353 (591)
|+++.+++|++++++|++||+++.++.++++|.+.+++...+..++ ++..++|++++|+||+|++++++++++++.++
T Consensus 836 ~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~ 913 (1054)
T TIGR01657 836 PFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNK 913 (1054)
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999887665543 23356899999999999999999999999999
Q ss_pred CCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCC-CCCCCCCCCCCcchhhhHHHHHHHHHH
Q psy8116 354 PTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKL-LDIP-TGRGAEFGSEPTQHFTVIFNTFVFMTL 431 (591)
Q Consensus 354 ~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~t~~f~~~v~~~~ 431 (591)
|.+++|+++| ..+++++.++.++++++++++++.+.+++..... +..+ .....+....+....|++| .++++|.
T Consensus 914 p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~ 989 (1054)
T TIGR01657 914 PLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQY 989 (1054)
T ss_pred chhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHH
Confidence 9999999999 4679999999999999999998887776654321 1100 0000001112344568888 5555666
Q ss_pred hhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHH----HhhccccccccCCChhHHHH
Q psy8116 432 FNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFI----IQFGREAFSTKSLTLEQWLW 490 (591)
Q Consensus 432 ~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~----v~~~~~~F~~~~l~~~~w~~ 490 (591)
+..+.+++. ..++.+++++|++++..+++.+++++++ +++.+.+|++.+++. .|-+
T Consensus 990 ~~~~~~~~~--g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~ 1049 (1054)
T TIGR01657 990 LITAIVNSK--GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ-EFRS 1049 (1054)
T ss_pred HHheEEEcC--CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH-HHHH
Confidence 666666654 2366678999998888777666655432 345588999999985 3433
No 14
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=4.7e-61 Score=566.43 Aligned_cols=471 Identities=21% Similarity=0.257 Sum_probs=343.8
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
.++.++..+||||+||||| ++++.++|++.+|+ ||+|+++|+.. +++.++++ ++.+++|+++|+|
T Consensus 507 ~~~~il~~~pF~s~rKrmS-viv~~~~~~~~l~~KGA~e~il~~~~~~----------~~~~~~~~-~~~~~~~a~~GlR 574 (1057)
T TIGR01652 507 KEYEILNVLEFNSDRKRMS-VIVRNPDGRIKLLCKGADTVIFKRLSSG----------GNQVNEET-KEHLENYASEGLR 574 (1057)
T ss_pred EEEEEEEecccCCCCCeEE-EEEEeCCCeEEEEEeCcHHHHHHHhhcc----------chhHHHHH-HHHHHHHHHcCCc
Confidence 4678889999999999999 66666677889999 99999999741 12334444 6789999999999
Q ss_pred EEEEEEEecCCCcccccccccCC-CC---C-----CchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEc
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDT-EP---N-----WDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVT 155 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~-~~---~-----~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~T 155 (591)
|||+|||++++++++.+...+.+ .. + ....+++|+||+|+|++|++||+|++++++|+.|++|||++||+|
T Consensus 575 tL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlT 654 (1057)
T TIGR01652 575 TLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLT 654 (1057)
T ss_pred EEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEc
Confidence 99999999987654332211110 00 0 011256899999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCceEEe---------------------------------------cchhhHHhhhcccch
Q psy8116 156 GDNINTARSIATKCGILKPGDDFLIL---------------------------------------EGKEFNRRVRDANGD 196 (591)
Q Consensus 156 Gd~~~ta~~ia~~~gi~~~~~~~i~l---------------------------------------~g~~~~~~~~~~~~~ 196 (591)
||+.+||.++|++||+++++...+.+ +|.++.....+.
T Consensus 655 GD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~--- 731 (1057)
T TIGR01652 655 GDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEE--- 731 (1057)
T ss_pred CCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhH---
Confidence 99999999999999998766544443 444333222110
Q ss_pred hhHHHHhhhcC--cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc
Q psy8116 197 VQQHLLDKVWP--RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 274 (591)
Q Consensus 197 ~~~~~l~~~~~--~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad 274 (591)
.++.+.++.. +..|+||++|+||+++|+.+++. .+++|+|||||.||+||||+|||||++.+....+|+.+||
T Consensus 732 -~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~----~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD 806 (1057)
T TIGR01652 732 -LEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKS----TGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASD 806 (1057)
T ss_pred -HHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhc----CCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhh
Confidence 1112233333 34599999999999999996432 3889999999999999999999999875344447899999
Q ss_pred ccccCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCC---CchhHHHHHHHHHHHhhhhhhhhc
Q psy8116 275 IILTDDNFSSIVKAV-MWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQD---SPLKAVQMLWVNLIMDTLASLALA 350 (591)
Q Consensus 275 ~vl~~~~~~~i~~~i-~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~---~pl~~~q~l~~nli~~~~~~l~l~ 350 (591)
+++. +|+.+.+++ .|||++|+|+++++.|++++|++.+++.+++.++..+ +++.+++++|+|++++.+|+++++
T Consensus 807 ~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~ 884 (1057)
T TIGR01652 807 FAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLG 884 (1057)
T ss_pred hhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999 699999998 5899999999999999999999999999998876543 467899999999999999999997
Q ss_pred c--CCCCcccccCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCCCCCCCCCCCcchhhhHH
Q psy8116 351 T--EMPTPDLLLRKPY----GRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDI-PTGRGAEFGSEPTQHFTVIF 423 (591)
Q Consensus 351 ~--~~~~~~l~~~~P~----~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~t~~f 423 (591)
. +++++++|.++|+ ++++++++.+.++.|++.|++|++++|++.+......+. .+|... ......+++|
T Consensus 885 ~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~ 960 (1057)
T TIGR01652 885 VFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLD----DFSSVGVIVF 960 (1057)
T ss_pred HhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccc----chhhHHHHHH
Confidence 6 6788999999997 677889999999999999999999988776544322221 112111 1223445666
Q ss_pred HHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHH----HHHhhc-c-c---cccccCCChhHHHHHHHH
Q psy8116 424 NTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQV----FIIQFG-R-E---AFSTKSLTLEQWLWCLFF 494 (591)
Q Consensus 424 ~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~----~~v~~~-~-~---~F~~~~l~~~~w~~~l~~ 494 (591)
.++++...+..+..-..| +++.++.+++++++.+ ++..+. + . .+....-++..|+.+++.
T Consensus 961 ~~~~~~~~~~~~~~~~~w-----------t~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~ 1029 (1057)
T TIGR01652 961 TALVVIVNLKIALEINRW-----------NWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVI 1029 (1057)
T ss_pred HHHHHHHHHHHHHHHhHh-----------HHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHH
Confidence 666555544433221111 1111111222222221 111111 1 0 111222467789999999
Q ss_pred HHHHHHHHHHHHhhccCcccc
Q psy8116 495 GIGTLLWGQVVTTVPTRKLPK 515 (591)
Q Consensus 495 ~~~~ll~~eiik~i~~~~~~~ 515 (591)
.+++++++.+++.+.+...|.
T Consensus 1030 ~~~~l~p~~~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1030 VLISLLPRFTYKAIQRLFRPP 1050 (1057)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999987766653
No 15
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=5.6e-58 Score=536.06 Aligned_cols=471 Identities=18% Similarity=0.191 Sum_probs=336.5
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccC
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGL 83 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~Gl 83 (591)
.++|.++..|||+|+||||| ++++.++|++.+|+ ||+|+++|+...+ ++.+++ +++.+++||++||
T Consensus 600 ~~~~~il~~~pF~S~rKrMS-vIv~~~~~~~~l~~KGA~e~il~~~~~~~~---------~~~~~~-~~~~l~~~a~~Gl 668 (1178)
T PLN03190 600 RQRFNVLGLHEFDSDRKRMS-VILGCPDKTVKVFVKGADTSMFSVIDRSLN---------MNVIRA-TEAHLHTYSSLGL 668 (1178)
T ss_pred eecceeEEEecccccccEEE-EEEEcCCCcEEEEEecCcHHHHHhhccccc---------chhHHH-HHHHHHHHHhcCC
Confidence 46788899999999999999 66676778899999 9999999975422 223333 3578999999999
Q ss_pred eEEEEEEEecCCCcccccccccC---------CCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEE
Q psy8116 84 RTISIAYRDFVPGKAEINQVHID---------TEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMV 154 (591)
Q Consensus 84 R~l~~A~k~~~~~~~~~~~~~~~---------~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~ 154 (591)
||||+|||++++++++.+...++ ++...+..+++|+||+++|+++++|++|++++++|++|++|||++||+
T Consensus 669 RtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ml 748 (1178)
T PLN03190 669 RTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVL 748 (1178)
T ss_pred ceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEE
Confidence 99999999998765443322211 111111235689999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCceEEecc-----------------------------------------------hhhH
Q psy8116 155 TGDNINTARSIATKCGILKPGDDFLILEG-----------------------------------------------KEFN 187 (591)
Q Consensus 155 TGd~~~ta~~ia~~~gi~~~~~~~i~l~g-----------------------------------------------~~~~ 187 (591)
|||+.+||.+||++|||++++...+.+++ .++.
T Consensus 749 TGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~ 828 (1178)
T PLN03190 749 TGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLV 828 (1178)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHH
Confidence 99999999999999999887655444433 2222
Q ss_pred HhhhcccchhhHHHHhhhcCc--ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCc
Q psy8116 188 RRVRDANGDVQQHLLDKVWPR--LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAG 265 (591)
Q Consensus 188 ~~~~~~~~~~~~~~l~~~~~~--~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~ 265 (591)
....+ ...+.+.++..+ ..+|||++|.||+++|+.+++. .+++|++||||+||++|||+|||||++.+..
T Consensus 829 ~~l~~----~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~----~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~E 900 (1178)
T PLN03190 829 YVLDS----ELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNR----TSDMTLAIGDGANDVSMIQMADVGVGISGQE 900 (1178)
T ss_pred HHhhh----HHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhc----CCcEEEEECCCcchHHHHHhcCeeeeecCch
Confidence 21110 011233343333 3479999999999999997543 3578999999999999999999999765444
Q ss_pred cHHHHhcccccccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCch---hHHHHHHHHHHH
Q psy8116 266 TDVAKEASDIILTDDNFSSIVKAVM-WGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPL---KAVQMLWVNLIM 341 (591)
Q Consensus 266 ~~~ak~aad~vl~~~~~~~i~~~i~-~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl---~~~q~l~~nli~ 341 (591)
..+|+.+||+++. .|..+.+++. |||+.|.|+.++++|.+|+|++.++++|++.+++++++. .++.+.++|+++
T Consensus 901 G~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~f 978 (1178)
T PLN03190 901 GRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIY 978 (1178)
T ss_pred hHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 5589999999999 9999999998 999999999999999999999999999999988877764 578899999999
Q ss_pred hhhhhhhhcc--CCCCcccccCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q psy8116 342 DTLASLALAT--EMPTPDLLLRKPY----GRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEP 415 (591)
Q Consensus 342 ~~~~~l~l~~--~~~~~~l~~~~P~----~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (591)
+.+|.++++. ++.+++.+.+.|. ++++..++.+.|+.|++.|+||++++|++.++....... ++
T Consensus 979 TslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~-~~--------- 1048 (1178)
T PLN03190 979 TALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTI-DG--------- 1048 (1178)
T ss_pred HhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-Cc---------
Confidence 9999999865 4566667777784 667788999999999999999999988775543211110 01
Q ss_pred cchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhc--cc--cccccCCChhHHHHH
Q psy8116 416 TQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFG--RE--AFSTKSLTLEQWLWC 491 (591)
Q Consensus 416 ~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~--~~--~F~~~~l~~~~w~~~ 491 (591)
....++.+.+.++...+.... ..+.+ ++ +....+|+++++.+++.+++..++ .. .+....-++..|+.+
T Consensus 1049 ~~~~~~~~~~~v~~vnl~i~~--~~~~w-t~----~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~i 1121 (1178)
T PLN03190 1049 SSIGDLWTLAVVILVNLHLAM--DIIRW-NW----ITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCL 1121 (1178)
T ss_pred eeEhHhhhhHHHHHHHHHHHH--HHhhh-hH----HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHhccHHHHHHH
Confidence 111223333333322222211 11110 11 001111222222222222221111 10 111122357789888
Q ss_pred HHHHHHHHHHHHHHHhhccCcccc
Q psy8116 492 LFFGIGTLLWGQVVTTVPTRKLPK 515 (591)
Q Consensus 492 l~~~~~~ll~~eiik~i~~~~~~~ 515 (591)
+++.+++++++.++|.+.+...|.
T Consensus 1122 ll~~~~~l~p~~~~~~~~~~~~P~ 1145 (1178)
T PLN03190 1122 LAIVVAALLPRFVVKVLYQYFTPC 1145 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888899999999999987776664
No 16
>KOG0206|consensus
Probab=100.00 E-value=1.9e-58 Score=523.27 Aligned_cols=477 Identities=20% Similarity=0.272 Sum_probs=350.2
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccC
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGL 83 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~Gl 83 (591)
+++|..+...||||+||||| ||++.++|+.++|| +.+|+++++. ++ +..+++ ..+++++||.+||
T Consensus 526 ~~~y~lL~iLeF~S~RKRMS-VIVR~p~g~i~LycKGADsvI~erL~~----~~------~~~~e~-T~~Hl~~yA~eGL 593 (1151)
T KOG0206|consen 526 EETYELLNVLEFNSTRKRMS-VIVRDPDGRILLYCKGADSVIFERLSK----NG------EKLREK-TQEHLEEYATEGL 593 (1151)
T ss_pred ceeEEEEEEeccccccceeE-EEEEcCCCcEEEEEcCcchhhHhhhhh----cc------hHHHHH-HHHHHHHHHhhhh
Confidence 56788888899999999999 77788999999999 8899999984 11 222333 3478999999999
Q ss_pred eEEEEEEEecCCCcccccccccC-CCCCC--------chhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEE
Q psy8116 84 RTISIAYRDFVPGKAEINQVHID-TEPNW--------DDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMV 154 (591)
Q Consensus 84 R~l~~A~k~~~~~~~~~~~~~~~-~~~~~--------~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~ 154 (591)
||||+|||++++++++.|.+.+. ..... +..+.+|+||+++|.+++||+++++||++|+.|++||||+||+
T Consensus 594 RTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVL 673 (1151)
T KOG0206|consen 594 RTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVL 673 (1151)
T ss_pred hHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEE
Confidence 99999999999999876655442 11111 2236799999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCceEEecchh---------------------------------------------hHHh
Q psy8116 155 TGDNINTARSIATKCGILKPGDDFLILEGKE---------------------------------------------FNRR 189 (591)
Q Consensus 155 TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~---------------------------------------------~~~~ 189 (591)
|||+.+||.+|+.+|++++++...+.++... +...
T Consensus 674 TGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~a 753 (1151)
T KOG0206|consen 674 TGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYA 753 (1151)
T ss_pred cCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhh
Confidence 9999999999999999998877666654422 1111
Q ss_pred hhcccchhhHHHHh-hhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH
Q psy8116 190 VRDANGDVQQHLLD-KVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV 268 (591)
Q Consensus 190 ~~~~~~~~~~~~l~-~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ 268 (591)
+.+ +.....++ ...++..++||++|.||+.+|+.+++ ..+.++++||||+||++|++.|||||++++.+..+
T Consensus 754 L~~---~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~----~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQ 826 (1151)
T KOG0206|consen 754 LED---ELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKK----GLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQ 826 (1151)
T ss_pred hCc---hhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHh----cCCceEEEeeCCCccchheeeCCcCeeeccchhhh
Confidence 100 00111111 22356678999999999999999854 46889999999999999999999999999899999
Q ss_pred HHhcccccccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCC---chhHHHHHHHHHHHhhh
Q psy8116 269 AKEASDIILTDDNFSSIVKAVM-WGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDS---PLKAVQMLWVNLIMDTL 344 (591)
Q Consensus 269 ak~aad~vl~~~~~~~i~~~i~-~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~---pl~~~q~l~~nli~~~~ 344 (591)
|..+||+.+. .|..+.+++. ||||.|.|+++++.|.+|+|+.+.++.|++.++++++ .+.++++.++|++++.+
T Consensus 827 AvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSl 904 (1151)
T KOG0206|consen 827 AVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSL 904 (1151)
T ss_pred hhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecC
Confidence 9999999999 8999999987 9999999999999999999999999999999877554 35678899999999999
Q ss_pred hhhhhcc--CCCCcccccCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCCCCCCCCCCCCCcc
Q psy8116 345 ASLALAT--EMPTPDLLLRKPY----GRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKL-LDIPTGRGAEFGSEPTQ 417 (591)
Q Consensus 345 ~~l~l~~--~~~~~~l~~~~P~----~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 417 (591)
|.++++. .+.+.+.+.+.|. ++++..++++.++.|++.|+++++++|++.+..... .-..+|...+.+...
T Consensus 905 Pvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G-- 982 (1151)
T KOG0206|consen 905 PVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLG-- 982 (1151)
T ss_pred chhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhcc--
Confidence 9999976 5678888888884 677778999999999999999999998775433211 111223322322222
Q ss_pred hhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHH-HHHHHHHHHHHHHHHHhhc---------cccccccCCChhH
Q psy8116 418 HFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPI-FYSIWFITAASQVFIIQFG---------REAFSTKSLTLEQ 487 (591)
Q Consensus 418 ~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~-~~~~~~~~~~~~~~~v~~~---------~~~F~~~~l~~~~ 487 (591)
+.++++.|+...+... ... +.| . |.|.+ .|+++++-+++.+++.... ...+....-++..
T Consensus 983 --~~~~T~~Vivv~~~ia--L~~----~yw-T-~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~f 1052 (1151)
T KOG0206|consen 983 --TTVFTIIVIVVNLKIA--LET----SYW-T-WINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSF 1052 (1151)
T ss_pred --ceEEEEEEEEEEeeee--eee----hhe-e-HHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchH
Confidence 2222222221111100 001 111 0 11222 2222222222222221100 0112223346788
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccc
Q psy8116 488 WLWCLFFGIGTLLWGQVVTTVPTRKLPKI 516 (591)
Q Consensus 488 w~~~l~~~~~~ll~~eiik~i~~~~~~~~ 516 (591)
|+.+++..+.+++++.+.|.+.+...|..
T Consensus 1053 Wl~~ll~~v~~Llp~~~~~~l~~~~~Pt~ 1081 (1151)
T KOG0206|consen 1053 WLTLLLTVVAALLPDFVYKSLQRTFFPTD 1081 (1151)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhCCcH
Confidence 99999999999999999999987777643
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=5.8e-54 Score=488.98 Aligned_cols=397 Identities=21% Similarity=0.319 Sum_probs=306.2
Q ss_pred CCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeE
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRT 85 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~ 85 (591)
.+.++..+||||.+|+|++++....+|++++++ ||.|+++|+.. ++.++++ ++.+++++.+|+|+
T Consensus 352 ~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~-~~~~~~~~~~G~rv 419 (755)
T TIGR01647 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKV-EEKVDELASRGYRA 419 (755)
T ss_pred cCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHH-HHHHHHHHhCCCEE
Confidence 456778899999999999444333336666665 99999999741 2334443 56788999999999
Q ss_pred EEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 86 ISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 86 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
+++|||+- |++|+|+|+++++||+||+++++|++|+++||+++|+|||+..||.++
T Consensus 420 l~vA~~~~------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 420 LGVARTDE------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred EEEEEEcC------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 99999821 358999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC
Q psy8116 166 ATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG 245 (591)
Q Consensus 166 a~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg 245 (591)
|+++||..+ +++|+++... +.......+.+++...+..+|+|++|+||.++|+.+ |..|++|+|+|||
T Consensus 476 A~~lGI~~~-----~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~~VamvGDG 543 (755)
T TIGR01647 476 ARRLGLGTN-----IYTADVLLKG--DNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEIL-----QKRGHLVGMTGDG 543 (755)
T ss_pred HHHcCCCCC-----CcCHHHhcCC--cchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHH-----HhcCCEEEEEcCC
Confidence 999999542 2344443211 011122344566777788899999999999999994 5679999999999
Q ss_pred CCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC
Q psy8116 246 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQ 325 (591)
Q Consensus 246 ~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~ 325 (591)
.||+|||++|||||||| +|+|+||++||+++.+|+|+.+++++++||++|+|++|++.|.++.|+..+++.+++.++..
T Consensus 544 vNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 544 VNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred cccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 99999999999999999 79999999999999999999999999999999999999999999999998876666554333
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCC
Q psy8116 326 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKL-LDIP 404 (591)
Q Consensus 326 ~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~ 404 (591)
.|++|+|+||+|+++|. +++++++|++++. ++|. +..+ ..++..++..|++.++..|.++++.... +...
T Consensus 623 -~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~---~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 693 (755)
T TIGR01647 623 -FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQ---RWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFID 693 (755)
T ss_pred -cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCC---ccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 45999999999999996 6999999998752 4443 3333 3667777778888777666665544320 0000
Q ss_pred CCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHH
Q psy8116 405 TGRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFI 470 (591)
Q Consensus 405 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~ 470 (591)
..+ ........+|++|.++++.|.++.+++|+.+ ..|+. ..+++++.+.++..++..++
T Consensus 694 -~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~---~~~~~-~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 694 -KFG--LQLLHGNLQSLIYLQVSISGQATIFVTRTHG---FFWSE-RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred -ccc--ccccHhhhHHHHHHHHHHHHHHHHheeccCC---CCccc-CCcHHHHHHHHHHHHHHHHH
Confidence 000 0112235789999999999999999999754 33433 46666666665555554443
No 18
>KOG0210|consensus
Probab=100.00 E-value=1.4e-51 Score=430.60 Aligned_cols=457 Identities=19% Similarity=0.228 Sum_probs=342.9
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
+-+|.+++.|||+|+.|||++.|.+..++++..|. +++|++.--.+ .+|+++...+||++|||
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---------------NdWleEE~gNMAREGLR 600 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---------------NDWLEEECGNMAREGLR 600 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---------------chhhhhhhhhhhhhcce
Confidence 35788999999999999999666555578888888 88888754322 23778889999999999
Q ss_pred EEEEEEEecCCCcccccccccCCC-CCCch---------hhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEE
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTE-PNWDD---------EEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMV 154 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~-~~~~~---------~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~ 154 (591)
||++|.|.+++++++.++..+.+. ....+ +..+|+||.++|++|.||+++++|+.+++.||+|||++||+
T Consensus 601 tLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWML 680 (1051)
T KOG0210|consen 601 TLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWML 680 (1051)
T ss_pred EEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEE
Confidence 999999999988876544433211 11111 23689999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCceEEec--------------------------chhhHHhhhcccchhhHHHHhhh-cC
Q psy8116 155 TGDNINTARSIATKCGILKPGDDFLILE--------------------------GKEFNRRVRDANGDVQQHLLDKV-WP 207 (591)
Q Consensus 155 TGd~~~ta~~ia~~~gi~~~~~~~i~l~--------------------------g~~~~~~~~~~~~~~~~~~l~~~-~~ 207 (591)
|||+.+||..||+..++.+.++++.++. |..++-.+. ..++|..+-. -.
T Consensus 681 TGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~----yye~Ef~el~~~~ 756 (1051)
T KOG0210|consen 681 TGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLK----YYEDEFIELVCEL 756 (1051)
T ss_pred cCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHH----HHHHHHHHHHHhc
Confidence 9999999999999999988766554443 322221111 1122333322 23
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
...++||++|+||+++++.++++ .+..|++||||-||+.|++.||+||++-+++..+|.-|||+.++ .|+.+.+
T Consensus 757 ~aVv~CRctPtQKA~v~~llq~~----t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~r 830 (1051)
T KOG0210|consen 757 PAVVCCRCTPTQKAQVVRLLQKK----TGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSR 830 (1051)
T ss_pred CcEEEEecChhHHHHHHHHHHHh----hCceEEEEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHH
Confidence 45788999999999999998765 47899999999999999999999999877888899999999999 9999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHhhhhhhhhccCC-CCcccccCC
Q psy8116 288 AVM-WGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQ---MLWVNLIMDTLASLALATEM-PTPDLLLRK 362 (591)
Q Consensus 288 ~i~-~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q---~l~~nli~~~~~~l~l~~~~-~~~~l~~~~ 362 (591)
++. |||+.|.|..+.-+|.+...++...++.++.+...+.|..-+| |+-+..+++.+|.+++..+. .++++....
T Consensus 831 LLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~y 910 (1051)
T KOG0210|consen 831 LLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLY 910 (1051)
T ss_pred HhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhh
Confidence 998 7999999999999999999999999998888777777766554 67788899999999998854 666666667
Q ss_pred CC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HhhcccCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhh-hhh
Q psy8116 363 PY----GRTKPLISKTMMKNILGQAIYQLTVVFTLLF-VGDKLLDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFN-EIN 436 (591)
Q Consensus 363 P~----~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~-~~~ 436 (591)
|. -.+...+|.+.|..|+..++||+.++....+ ....- .....++.|.++++..+.- ++.
T Consensus 911 PELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~e--------------f~~ivaisFtaLi~tELiMVaLt 976 (1051)
T KOG0210|consen 911 PELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDTE--------------FIHIVAISFTALILTELIMVALT 976 (1051)
T ss_pred HHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhhh--------------heEeeeeeeHHHHHHHHHHHhhh
Confidence 73 3455678999999999999999988765422 22111 1123355566655543322 222
Q ss_pred hccccCcccccccCccCHHHHHHHHHHHHHHHHHHhhccccccccCCCh-hHHHHHHHHHHHHHHHHHHHHhhccCccc
Q psy8116 437 ARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQFGREAFSTKSLTL-EQWLWCLFFGIGTLLWGQVVTTVPTRKLP 514 (591)
Q Consensus 437 ~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~F~~~~l~~-~~w~~~l~~~~~~ll~~eiik~i~~~~~~ 514 (591)
.+.+ +|....+-++++.+.+....+...+|....+.. .+.+...++.++++++..+.|++.|+..|
T Consensus 977 v~tw------------~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sP 1043 (1051)
T KOG0210|consen 977 VRTW------------HWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSP 1043 (1051)
T ss_pred hhhh------------hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 2221 334444555566665555666677776665543 33444456678888899999999877655
No 19
>KOG0208|consensus
Probab=100.00 E-value=7.3e-50 Score=433.49 Aligned_cols=414 Identities=22% Similarity=0.295 Sum_probs=324.6
Q ss_pred cccccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhh
Q psy8116 4 DIPEENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMAC 80 (591)
Q Consensus 4 ~~~~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 80 (591)
+.|++.+-++.+|||+|+.+||||+|....+.++.+|+ ||.|.+.|+. +..|.. +.++++.|+.
T Consensus 595 ~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p----~tvP~d---------y~evl~~Yt~ 661 (1140)
T KOG0208|consen 595 ECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP----ETVPAD---------YQEVLKEYTH 661 (1140)
T ss_pred cCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc----ccCCcc---------HHHHHHHHHh
Confidence 44566788999999999999999544444456788999 9999999984 332222 4578899999
Q ss_pred ccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHH
Q psy8116 81 DGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNIN 160 (591)
Q Consensus 81 ~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ 160 (591)
+|+|+||+|+|.++... + ++....+++.+|+||+|+|++.+||+++++++.+|++|++|+|+.+|+||||..
T Consensus 662 ~GfRVIAlA~K~L~~~~---~-----~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNll 733 (1140)
T KOG0208|consen 662 QGFRVIALASKELETST---L-----QKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLL 733 (1140)
T ss_pred CCeEEEEEecCccCcch---H-----HHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchh
Confidence 99999999999997641 0 012234678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCceEEec-----------------------------------------------------chhhH
Q psy8116 161 TARSIATKCGILKPGDDFLILE-----------------------------------------------------GKEFN 187 (591)
Q Consensus 161 ta~~ia~~~gi~~~~~~~i~l~-----------------------------------------------------g~~~~ 187 (591)
||..+|++||++.+....+..+ |+.+.
T Consensus 734 TaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~ 813 (1140)
T KOG0208|consen 734 TAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQ 813 (1140)
T ss_pred eeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhH
Confidence 9999999999998755443332 11111
Q ss_pred HhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccH
Q psy8116 188 RRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTD 267 (591)
Q Consensus 188 ~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~ 267 (591)
... +...++++++..+..||||++|.||.++|+. +|..+..|.|+|||+||+.|||+||+||+.+.+
T Consensus 814 ~i~-----~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~-----lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--- 880 (1140)
T KOG0208|consen 814 VIL-----EHFPELVPKILLKGTVFARMSPDQKAELIEA-----LQKLGYKVGFCGDGANDCGALKAADVGISLSEA--- 880 (1140)
T ss_pred HHH-----hhcHHHHHHHHhcCeEEeecCchhHHHHHHH-----HHhcCcEEEecCCCcchhhhhhhcccCcchhhh---
Confidence 111 2345667788888999999999999999998 567799999999999999999999999999833
Q ss_pred HHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhh
Q psy8116 268 VAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASL 347 (591)
Q Consensus 268 ~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l 347 (591)
.|.-||.++..-.+.+++..+|++||+.+.....+++|+..+.++..+..+ .++.....+++.|.|+++++..++.++
T Consensus 881 EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~ 958 (1140)
T KOG0208|consen 881 EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAV 958 (1140)
T ss_pred hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHH
Confidence 445689999988899999999999999999999999999999887766554 455667889999999999999999999
Q ss_pred hhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCCCCCCCCCCCCCCcchhhhHHHHH
Q psy8116 348 ALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDK-LLDIPTGRGAEFGSEPTQHFTVIFNTF 426 (591)
Q Consensus 348 ~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~f~~~ 426 (591)
.++..+|..++-..+| +..+++++.+...+++.++..++.+++.+.... -|-.+..++. ..+..+...|.+|.+-
T Consensus 959 ~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~-~~nt~s~~~T~lF~vS 1034 (1140)
T KOG0208|consen 959 MMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQV-DDNTQSSDNTSLFFVS 1034 (1140)
T ss_pred HHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCc-CcccccceeeEeeehh
Confidence 9999999999988888 455999999999999988888887777665432 1111111111 1222344457777766
Q ss_pred HHHHHhhhhhhccccCcccccccCccCHHHHHHH
Q psy8116 427 VFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIW 460 (591)
Q Consensus 427 v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~ 460 (591)
.+..+++++.... ..++.+++|+|+.|+..+
T Consensus 1035 ~fqYi~~a~v~S~---g~pfr~pl~~n~~f~~~i 1065 (1140)
T KOG0208|consen 1035 SFQYIFIALVLSK---GSPFRRPLWKNVLFKVFI 1065 (1140)
T ss_pred HHHHHHhheeecc---CCcccCchhcCceeeeeh
Confidence 6666676665433 225556788888776543
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.2e-38 Score=352.84 Aligned_cols=217 Identities=24% Similarity=0.386 Sum_probs=188.3
Q ss_pred eccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEe
Q psy8116 15 HFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRD 92 (591)
Q Consensus 15 ~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~ 92 (591)
..||+|++|+|+ +.++ |+ .++. ||.+++.|+. +|...+. + +++..++++++|+|+++++
T Consensus 367 ~~pF~~~~k~~g-v~~~---g~-~i~kGa~~~il~~~~~----~g~~~~~--~-----~~~~~~~~a~~G~~~l~v~--- 427 (673)
T PRK14010 367 YIPFTAETRMSG-VKFT---TR-EVYKGAPNSMVKRVKE----AGGHIPV--D-----LDALVKGVSKKGGTPLVVL--- 427 (673)
T ss_pred eeccccccceeE-EEEC---CE-EEEECCHHHHHHHhhh----cCCCCch--H-----HHHHHHHHHhCCCeEEEEE---
Confidence 368899999999 4432 33 3445 9999999984 2322221 1 2345678999999999875
Q ss_pred cCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 93 FVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
.|++++|+++++||+|||++++|++|+++||+++|+||||..||.++|+++|+.
T Consensus 428 --------------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~ 481 (673)
T PRK14010 428 --------------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD 481 (673)
T ss_pred --------------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 146899999999999999999999999999999999999999999999999993
Q ss_pred CCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhh
Q psy8116 173 KPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPAL 252 (591)
Q Consensus 173 ~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mL 252 (591)
.+++|++|+||.++|+. +|.+|++|+|+|||.||+|+|
T Consensus 482 -------------------------------------~v~A~~~PedK~~iV~~-----lQ~~G~~VaMtGDGvNDAPAL 519 (673)
T PRK14010 482 -------------------------------------RFVAECKPEDKINVIRE-----EQAKGHIVAMTGDGTNDAPAL 519 (673)
T ss_pred -------------------------------------eEEcCCCHHHHHHHHHH-----HHhCCCEEEEECCChhhHHHH
Confidence 27899999999999998 466799999999999999999
Q ss_pred hcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy8116 253 KKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFI 319 (591)
Q Consensus 253 k~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~ 319 (591)
++|||||||| +|+|+||++||+|+.||+|+.+++++++||.+|.|+++++.|.++.|+..++..+.
T Consensus 520 a~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 520 AEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 9999999999 89999999999999999999999999999999999999999999999876655544
No 21
>KOG0209|consensus
Probab=100.00 E-value=2.3e-37 Score=329.69 Aligned_cols=457 Identities=17% Similarity=0.160 Sum_probs=308.1
Q ss_pred CCcceeeccCCcccceeeeEEeeC-CCC--cEEEEE---echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhcc
Q psy8116 9 NADPGLHFQLSAARALMKVTVIPR-KGG--GYRSLP---TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDG 82 (591)
Q Consensus 9 ~~~~v~~fpF~s~rk~msv~v~~~-~~~--~~~~~~---~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~G 82 (591)
++.+...|.|+|..|||||++-.. +++ +|++.+ ||+|-++-... +++ +++...+|+++|
T Consensus 569 ~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dv-----------P~d----Y~~iYk~ytR~G 633 (1160)
T KOG0209|consen 569 KLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDV-----------PKD----YDEIYKRYTRQG 633 (1160)
T ss_pred ccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhC-----------chh----HHHHHHHHhhcc
Confidence 467778888899999999444322 222 366665 99998876532 222 445677899999
Q ss_pred CeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy8116 83 LRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTA 162 (591)
Q Consensus 83 lR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta 162 (591)
.||||+|||++..-.. ++....+++++|+||+|.|++.+.-|++++++++|+.+++.+++++|+||||+.||
T Consensus 634 sRVLALg~K~l~~~~~--------~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTA 705 (1160)
T KOG0209|consen 634 SRVLALGYKPLGDMMV--------SQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTA 705 (1160)
T ss_pred ceEEEEecccccccch--------hhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccch
Confidence 9999999999974321 11122467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCce---------------------------------------EEecchhhHHhhhcccchhhHHHHh
Q psy8116 163 RSIATKCGILKPGDDF---------------------------------------LILEGKEFNRRVRDANGDVQQHLLD 203 (591)
Q Consensus 163 ~~ia~~~gi~~~~~~~---------------------------------------i~l~g~~~~~~~~~~~~~~~~~~l~ 203 (591)
.++|+++|+....-.. +|++|..++... ..+.+.
T Consensus 706 chVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~-------~~~~l~ 778 (1160)
T KOG0209|consen 706 CHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQ-------ATDQLR 778 (1160)
T ss_pred heehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHh-------hhHHHH
Confidence 9999999996541111 122233332221 112455
Q ss_pred hhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH---------------
Q psy8116 204 KVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV--------------- 268 (591)
Q Consensus 204 ~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~--------------- 268 (591)
.+.+.+.||||++|.||-.++.. ++..|..++|+|||+||+.|||+||||||.=++..+.
T Consensus 779 ~l~~hv~VfARvaP~QKE~ii~t-----lK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~ 853 (1160)
T KOG0209|consen 779 RLIPHVWVFARVAPKQKEFIITT-----LKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLE 853 (1160)
T ss_pred HhhhheeEEEeeChhhHHHHHHH-----HHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccC
Confidence 67788899999999999999998 4667999999999999999999999999975433210
Q ss_pred -------------------------------------------------------HHhcccccccCCChhHHHHHHHHHH
Q psy8116 269 -------------------------------------------------------AKEASDIILTDDNFSSIVKAVMWGR 293 (591)
Q Consensus 269 -------------------------------------------------------ak~aad~vl~~~~~~~i~~~i~~gR 293 (591)
|.-||.+...-.+.+++.+.|++||
T Consensus 854 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGR 933 (1160)
T KOG0209|consen 854 PAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGR 933 (1160)
T ss_pred chhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcc
Confidence 0114555555557788999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCH
Q psy8116 294 NVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISK 373 (591)
Q Consensus 294 ~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~ 373 (591)
+..-+.-+++...-...++.. ..++.++.-+.-+++.|...-.+++. ..-+.+...+|-+.+.+.+|.. .++|.
T Consensus 934 ctLVtTlQMfKILALN~LisA--YslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~~---nIFN~ 1007 (1160)
T KOG0209|consen 934 CTLVTTLQMFKILALNCLISA--YSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPLP---NIFNV 1007 (1160)
T ss_pred hhHHHHHHHHHHHHHHHHHHH--HHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCCC---CcchH
Confidence 999888777665433332222 12234555566778888776665544 3445556678999999998843 48899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhh-hhhhccccCcccccccCcc
Q psy8116 374 TMMKNILGQAIYQLTVVFTLLFVGDKLLDIPTGRGAEFGSEPTQHFTVIFNTFVFMTLFN-EINARKIHGQRNVFEGFFS 452 (591)
Q Consensus 374 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~-~~~~r~~~~~~~~f~~~~~ 452 (591)
..+..+++|-.++...++.+.-.....-.-...-...-...|+...|.+|..-...|+.. ++|.+ .+++.+++..
T Consensus 1008 Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~----G~PF~Esl~e 1083 (1160)
T KOG0209|consen 1008 YIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ----GRPFRESLRE 1083 (1160)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc----Ccchhhhhhh
Confidence 888888888877766554443222221111111111112234555566665555555544 33322 3477789999
Q ss_pred CHHHHHHHHHHHHHHHHHHh--h--ccccccccCCChhH----HHHHHHHHHHHHHHHHHHHhhcc
Q psy8116 453 NPIFYSIWFITAASQVFIIQ--F--GREAFSTKSLTLEQ----WLWCLFFGIGTLLWGQVVTTVPT 510 (591)
Q Consensus 453 n~~~~~~~~~~~~~~~~~v~--~--~~~~F~~~~l~~~~----w~~~l~~~~~~ll~~eiik~i~~ 510 (591)
|+.++..++++..+.+.+.. . .+..|...+++-.. ..+.++-.+++++++.+.+++-.
T Consensus 1084 NK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1084 NKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred ccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 98877766655444333321 1 25678888886332 22333334667778887777643
No 22
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.6e-36 Score=330.56 Aligned_cols=250 Identities=30% Similarity=0.425 Sum_probs=198.3
Q ss_pred ceeeccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEE
Q psy8116 12 PGLHFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIA 89 (591)
Q Consensus 12 ~v~~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A 89 (591)
....+||++.+|+|+ +..+ |. .+.. +|.|++.|.. +|...| ++ +++.+++++++|+|++++|
T Consensus 368 ~~~~~pF~s~~~~~g-v~~~---g~-~~~kGa~e~il~~~~~----~g~~~~------~~-~~~~~~~~a~~G~~~l~va 431 (679)
T PRK01122 368 HATFVPFSAQTRMSG-VDLD---GR-EIRKGAVDAIRRYVES----NGGHFP------AE-LDAAVDEVARKGGTPLVVA 431 (679)
T ss_pred cceeEeecCcCceEE-EEEC---CE-EEEECCHHHHHHHHHh----cCCcCh------HH-HHHHHHHHHhCCCcEEEEE
Confidence 456678899999888 4332 32 2222 9999999963 233222 12 2456788999999999999
Q ss_pred EEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy8116 90 YRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKC 169 (591)
Q Consensus 90 ~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~ 169 (591)
+ |++++|+++++||+|||++++|++|+++||+++|+||||..||.++|+++
T Consensus 432 ~-----------------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 432 E-----------------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred E-----------------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 3 45799999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCH
Q psy8116 170 GILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDG 249 (591)
Q Consensus 170 gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~ 249 (591)
|+. .+++|++|+||.++|+. +|..|++|+|+|||.||+
T Consensus 483 GId-------------------------------------~v~A~~~PedK~~iV~~-----lQ~~G~~VaMtGDGvNDA 520 (679)
T PRK01122 483 GVD-------------------------------------DFLAEATPEDKLALIRQ-----EQAEGRLVAMTGDGTNDA 520 (679)
T ss_pred CCc-------------------------------------EEEccCCHHHHHHHHHH-----HHHcCCeEEEECCCcchH
Confidence 992 16899999999999999 466799999999999999
Q ss_pred HhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHHHHHhhcc---
Q psy8116 250 PALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV---VAVIVAFIGACA--- 323 (591)
Q Consensus 250 ~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~---~~~~~~~~~~~~--- 323 (591)
|||++|||||||| +|+|+||++||+++.||||+.+++++++||+..-.--....|++..-+ ++++++++...+
T Consensus 521 PALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~ 599 (679)
T PRK01122 521 PALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQL 599 (679)
T ss_pred HHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCccc
Confidence 9999999999999 899999999999999999999999999999999777777888877443 244555544332
Q ss_pred ------CCCCchhHHH-HHHHHHH-Hhhhhhhhh
Q psy8116 324 ------VQDSPLKAVQ-MLWVNLI-MDTLASLAL 349 (591)
Q Consensus 324 ------~~~~pl~~~q-~l~~nli-~~~~~~l~l 349 (591)
...+|.+++. -+.+|-+ +..+..++|
T Consensus 600 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (679)
T PRK01122 600 NALNIMHLHSPQSAILSALIFNALIIVALIPLAL 633 (679)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHHhHHHHh
Confidence 2456666654 2334433 333444444
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.3e-32 Score=302.65 Aligned_cols=250 Identities=27% Similarity=0.408 Sum_probs=198.0
Q ss_pred eeeccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEE
Q psy8116 13 GLHFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAY 90 (591)
Q Consensus 13 v~~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~ 90 (591)
....||++.+|+|+ +... +|. .+.. ||.+++.|.. +|...| + + +++.+++++++|+|++++|+
T Consensus 369 ~~~~pf~~~~~~sg-~~~~--~g~-~~~kGa~e~i~~~~~~----~g~~~~--~----~-~~~~~~~~a~~G~r~l~va~ 433 (675)
T TIGR01497 369 ATFVEFTAQTRMSG-INLD--NGR-MIRKGAVDAIKRHVEA----NGGHIP--T----D-LDQAVDQVARQGGTPLVVCE 433 (675)
T ss_pred ceEEEEcCCCcEEE-EEEe--CCe-EEEECCHHHHHHHHHh----cCCCCc--H----H-HHHHHHHHHhCCCeEEEEEE
Confidence 45667799988777 4432 332 3333 9999998862 232222 1 1 34667889999999999994
Q ss_pred EecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC
Q psy8116 91 RDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCG 170 (591)
Q Consensus 91 k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g 170 (591)
|.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++|
T Consensus 434 -----------------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 434 -----------------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred -----------------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 237999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHH
Q psy8116 171 ILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGP 250 (591)
Q Consensus 171 i~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~ 250 (591)
+. .+++|++|++|..+++.+ +..++.|+|+|||.||+|
T Consensus 485 I~-------------------------------------~v~a~~~PedK~~~v~~l-----q~~g~~VamvGDG~NDap 522 (675)
T TIGR01497 485 VD-------------------------------------DFIAEATPEDKIALIRQE-----QAEGKLVAMTGDGTNDAP 522 (675)
T ss_pred CC-------------------------------------EEEcCCCHHHHHHHHHHH-----HHcCCeEEEECCCcchHH
Confidence 93 167899999999999985 456889999999999999
Q ss_pred hhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHhhc-----
Q psy8116 251 ALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVA---VIVAFIGAC----- 322 (591)
Q Consensus 251 mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~---~~~~~~~~~----- 322 (591)
||++||+|+||+ +|++.+|++||+++.||||+.+++++++||+++-+......|++..++.- ++++.+...
T Consensus 523 AL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (675)
T TIGR01497 523 ALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQ 601 (675)
T ss_pred HHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchh
Confidence 999999999999 89999999999999999999999999999999999999999999887643 333333322
Q ss_pred ----cCCCCchhHHH-HHHHHHH-Hhhhhhhhh
Q psy8116 323 ----AVQDSPLKAVQ-MLWVNLI-MDTLASLAL 349 (591)
Q Consensus 323 ----~~~~~pl~~~q-~l~~nli-~~~~~~l~l 349 (591)
....+|-+++. -+.+|-+ +..+..++|
T Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (675)
T TIGR01497 602 ALNIMCLHSPDSAILSALIFNALIIPALIPLAL 634 (675)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHHhHHHHh
Confidence 23456766654 2334433 333444444
No 24
>KOG0205|consensus
Probab=99.97 E-value=1.1e-31 Score=280.59 Aligned_cols=292 Identities=23% Similarity=0.412 Sum_probs=222.4
Q ss_pred cCCcceeeccCCcccceeeeEEeeCCCCc-EEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCe
Q psy8116 8 ENADPGLHFQLSAARALMKVTVIPRKGGG-YRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLR 84 (591)
Q Consensus 8 ~~~~~v~~fpF~s~rk~msv~v~~~~~~~-~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR 84 (591)
.+|..++.+|||+..||.+.++.. ++|+ +++-. ||.|++.|.. +.+.+++. .+.+++||++|+|
T Consensus 394 a~ikevhF~PFnPV~Krta~ty~d-~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~v-h~~id~~AeRGlR 460 (942)
T KOG0205|consen 394 AGIKEVHFLPFNPVDKRTALTYID-PDGNWHRVSKGAPEQILKLCNE-----------DHDIPERV-HSIIDKFAERGLR 460 (942)
T ss_pred hCceEEeeccCCccccceEEEEEC-CCCCEEEecCCChHHHHHHhhc-----------cCcchHHH-HHHHHHHHHhcch
Confidence 467788899999999999966665 5665 55555 9999999973 12233344 4789999999999
Q ss_pred EEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy8116 85 TISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS 164 (591)
Q Consensus 85 ~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ 164 (591)
.|++|++..++... +.-.....|+|+.-+-||+|.+..++|++....|..|.|+|||...-++.
T Consensus 461 SLgVArq~v~e~~~----------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~ke 524 (942)
T KOG0205|consen 461 SLAVARQEVPEKTK----------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKE 524 (942)
T ss_pred hhhhhhhccccccc----------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHh
Confidence 99999998876431 11124567999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 165 IATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 165 ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
.++++|+-.+ - ..+.++... +.++.......++...+..-|+.+.|++|+.+|+. +|..++.++|+||
T Consensus 525 Tgrrlgmgtn-m----ypss~llG~--~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~-----Lq~r~hi~gmtgd 592 (942)
T KOG0205|consen 525 TGRRLGMGTN-M----YPSSALLGL--GKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKI-----LQERKHIVGMTGD 592 (942)
T ss_pred hhhhhccccC-c----CCchhhccC--CCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHH-----HhhcCceecccCC
Confidence 9999998431 0 111111100 00111111122333344567888999999999999 5778999999999
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV 324 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~ 324 (591)
|.||+|+||+||+|+|+. +++|.|+.+||+|++....+-++.+++.+|.+|+|++.+..|.++..+-.+ +.|...++.
T Consensus 593 gvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv-~gfml~alI 670 (942)
T KOG0205|consen 593 GVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLIALI 670 (942)
T ss_pred Ccccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHHHHH
Confidence 999999999999999999 899999999999999999999999999999999999999999888776655 333333333
Q ss_pred CCCchhHHHHHHHHHHHh
Q psy8116 325 QDSPLKAVQMLWVNLIMD 342 (591)
Q Consensus 325 ~~~pl~~~q~l~~nli~~ 342 (591)
...-++|...+.+-++-|
T Consensus 671 w~~df~pfmvliiailnd 688 (942)
T KOG0205|consen 671 WEFDFSPFMVLIIAILND 688 (942)
T ss_pred HHhcCCHHHHHHHHHhcC
Confidence 344455666665555444
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=99.96 E-value=1.1e-28 Score=271.33 Aligned_cols=221 Identities=39% Similarity=0.605 Sum_probs=187.3
Q ss_pred eeccCCcccceeeeEEeeCCCCcEEEEEechhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEec
Q psy8116 14 LHFQLSAARALMKVTVIPRKGGGYRSLPTKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDF 93 (591)
Q Consensus 14 ~~fpF~s~rk~msv~v~~~~~~~~~~~~~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~~ 93 (591)
..+||++.+|+|+ ++++.+++.|..-.+|.+++.|.. +.+.+++++.+|+|++++|++.
T Consensus 278 ~~~~f~~~~~~~~-~~~~~~~~~~~~G~~~~i~~~~~~-------------------~~~~~~~~~~~g~~~~~~a~~~- 336 (499)
T TIGR01494 278 NVFEFSSVRKRMS-VIVRGPDGTYVKGAPEFVLSRVKD-------------------LEEKVKELAQSGLRVLAVASKE- 336 (499)
T ss_pred ceeccCCCCceEE-EEEecCCcEEEeCCHHHHHHhhHH-------------------HHHHHHHHHhCCCEEEEEEECC-
Confidence 4568899999999 555543333322128999998852 1233456788999999999643
Q ss_pred CCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy8116 94 VPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILK 173 (591)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~ 173 (591)
+++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 337 ----------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-- 386 (499)
T TIGR01494 337 ----------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-- 386 (499)
T ss_pred ----------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--
Confidence 58999999999999999999999999999999999999999999999987
Q ss_pred CCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhh
Q psy8116 174 PGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALK 253 (591)
Q Consensus 174 ~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk 253 (591)
+++.+|++|.++++.+ +..++.|+|+|||.||+||++
T Consensus 387 --------------------------------------~~~~~p~~K~~~v~~l-----~~~g~~v~~vGDg~nD~~al~ 423 (499)
T TIGR01494 387 --------------------------------------FARVTPEEKAALVEAL-----QKKGRVVAMTGDGVNDAPALK 423 (499)
T ss_pred --------------------------------------eeccCHHHHHHHHHHH-----HHCCCEEEEECCChhhHHHHH
Confidence 3578999999999985 455789999999999999999
Q ss_pred cCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCchhHHH
Q psy8116 254 KADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQ 333 (591)
Q Consensus 254 ~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~~pl~~~q 333 (591)
.||+||||+ ++++||+++.++++..+..++.+||..+.++++++.|.+++|++.+.+++++.+
T Consensus 424 ~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~----------- 486 (499)
T TIGR01494 424 KADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV----------- 486 (499)
T ss_pred hCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 999999997 588999999999999999999999999999999999999999998887775431
Q ss_pred HHHHHHHHhhhhhhh
Q psy8116 334 MLWVNLIMDTLASLA 348 (591)
Q Consensus 334 ~l~~nli~~~~~~l~ 348 (591)
+|+++++.++++
T Consensus 487 ---~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ---LNLVPPGLAALA 498 (499)
T ss_pred ---HHHHhcchhhhc
Confidence 777777766543
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.6e-28 Score=270.96 Aligned_cols=160 Identities=39% Similarity=0.539 Sum_probs=151.2
Q ss_pred ccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchh
Q psy8116 118 VNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDV 197 (591)
Q Consensus 118 e~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~ 197 (591)
..|-.++|+++++|++||+++++|++|++.|+++.|+||||..+|.++|+++||.
T Consensus 523 a~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------- 577 (713)
T COG2217 523 AVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------- 577 (713)
T ss_pred EECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-------------------------
Confidence 3566899999999999999999999999999999999999999999999999993
Q ss_pred hHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccc
Q psy8116 198 QQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIIL 277 (591)
Q Consensus 198 ~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl 277 (591)
.+++...|+||.+.|+.+ +..++.|+|+|||.||+|+|.+|||||||| .|+|+++++||+++
T Consensus 578 ------------~v~AellPedK~~~V~~l-----~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL 639 (713)
T COG2217 578 ------------EVRAELLPEDKAEIVREL-----QAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVL 639 (713)
T ss_pred ------------hheccCCcHHHHHHHHHH-----HhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEE
Confidence 267888999999999995 566899999999999999999999999999 69999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Q psy8116 278 TDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIG 320 (591)
Q Consensus 278 ~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~ 320 (591)
.+++...+.+++.-+|..+.+|++++.|.+.+|++.+.++.++
T Consensus 640 ~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 640 MRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988876
No 27
>KOG0207|consensus
Probab=99.94 E-value=8.2e-26 Score=246.84 Aligned_cols=192 Identities=36% Similarity=0.470 Sum_probs=164.0
Q ss_pred CcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhH
Q psy8116 120 NLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQ 199 (591)
Q Consensus 120 ~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~ 199 (591)
|-++.|+++++|++|||+..+|..|++.|+++.|+||||..+|+++|+++|+.
T Consensus 711 n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------- 763 (951)
T KOG0207|consen 711 NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------- 763 (951)
T ss_pred CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------------------------
Confidence 44799999999999999999999999999999999999999999999999972
Q ss_pred HHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccC
Q psy8116 200 HLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTD 279 (591)
Q Consensus 200 ~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~ 279 (591)
.|++...|+||.+.|+.+ +.++..|+|+|||.||+|+|.+||+||||| +|+++|.++||+++..
T Consensus 764 ----------~V~aev~P~~K~~~Ik~l-----q~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmr 827 (951)
T KOG0207|consen 764 ----------NVYAEVLPEQKAEKIKEI-----QKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMR 827 (951)
T ss_pred ----------eEEeccCchhhHHHHHHH-----HhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEc
Confidence 388999999999999995 566799999999999999999999999999 7899999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCC---CchhHHHHHHHHHHHhhhhhhhhcc-CCCC
Q psy8116 280 DNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQD---SPLKAVQMLWVNLIMDTLASLALAT-EMPT 355 (591)
Q Consensus 280 ~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~~~~~~---~pl~~~q~l~~nli~~~~~~l~l~~-~~~~ 355 (591)
++...++.++.-+|+...|++.++.|.+.+|++.+.++.. .++..+ .|.-+...+..+.+-..+-++.|-. ++|.
T Consensus 828 n~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag-vF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 828 NDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG-VFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred cchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee-cccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9999999999999999999999999999999998877753 333333 3333334444555555555555544 4454
No 28
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=99.94 E-value=2.6e-25 Score=253.41 Aligned_cols=174 Identities=30% Similarity=0.471 Sum_probs=158.2
Q ss_pred HHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEE
Q psy8116 73 NVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVR 152 (591)
Q Consensus 73 ~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~ 152 (591)
+.++++..+|+|++++|+ |.+++|+++++|++||+++++|++|+++|++++
T Consensus 538 ~~~~~~~~~g~~~v~va~-----------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~ 588 (741)
T PRK11033 538 GQINELESAGKTVVLVLR-----------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGV 588 (741)
T ss_pred HHHHHHHhCCCEEEEEEE-----------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 456778999999999994 347999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhc
Q psy8116 153 MVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKV 232 (591)
Q Consensus 153 ~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~ 232 (591)
|+|||+..+|.++|+++||. .+++..|++|..+++.+
T Consensus 589 llTGd~~~~a~~ia~~lgi~--------------------------------------~~~~~~p~~K~~~v~~l----- 625 (741)
T PRK11033 589 MLTGDNPRAAAAIAGELGID--------------------------------------FRAGLLPEDKVKAVTEL----- 625 (741)
T ss_pred EEcCCCHHHHHHHHHHcCCC--------------------------------------eecCCCHHHHHHHHHHH-----
Confidence 99999999999999999992 12346799999999985
Q ss_pred CCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy8116 233 SDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVV 312 (591)
Q Consensus 233 ~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~ 312 (591)
+. ++.|+|+|||.||+|||+.||+||||| ++++.++++||+++.++++..+.+++..||.++.+|++++.|.+.+|++
T Consensus 626 ~~-~~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~ 703 (741)
T PRK11033 626 NQ-HAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAI 703 (741)
T ss_pred hc-CCCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 357999999999999999999999999 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q psy8116 313 AVIVAFIG 320 (591)
Q Consensus 313 ~~~~~~~~ 320 (591)
.+.+++++
T Consensus 704 ~i~~a~~g 711 (741)
T PRK11033 704 FLVTTLLG 711 (741)
T ss_pred HHHHHHHh
Confidence 88877754
No 29
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.91 E-value=4.1e-24 Score=203.84 Aligned_cols=180 Identities=31% Similarity=0.519 Sum_probs=143.6
Q ss_pred CCchhHHHHHHHHHHHhhhhhhhhccCCCCcccccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy8116 326 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQAIYQLTVVFTLLFVGDKLLDIPT 405 (591)
Q Consensus 326 ~~pl~~~q~l~~nli~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 405 (591)
|.|+++.|+||+|+++|++|+++++.|||++++|+|||+++++++++++++..++.+|++++++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999888877765443321
Q ss_pred CCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhccccCcccccccCccCHHHHHHHHHHHHHHHHHHhh--ccccccccCC
Q psy8116 406 GRGAEFGSEPTQHFTVIFNTFVFMTLFNEINARKIHGQRNVFEGFFSNPIFYSIWFITAASQVFIIQF--GREAFSTKSL 483 (591)
Q Consensus 406 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~--~~~~F~~~~l 483 (591)
..+ +.....++|++|++++++|+++.+++|+..++...|.+.++|++++.++++++++|+++++. .+.+|++.++
T Consensus 81 ~~~---~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l 157 (182)
T PF00689_consen 81 ETN---NDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPL 157 (182)
T ss_dssp HHH---TTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----
T ss_pred ccc---hhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCC
Confidence 110 00134589999999999999999999986543333358889999999999999999888766 4789999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 484 TLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 484 ~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
++.+|++++.++++.++++|++|++
T Consensus 158 ~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 158 PLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999975
No 30
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.90 E-value=6.9e-23 Score=227.80 Aligned_cols=177 Identities=40% Similarity=0.568 Sum_probs=160.9
Q ss_pred HHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcC-CEE
Q psy8116 73 NVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAG-ITV 151 (591)
Q Consensus 73 ~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aG-I~v 151 (591)
+.++.++.+|+|++.+|. |.+++|.+.++|+++|+++++|+.|+++| +++
T Consensus 354 ~~~~~~~~~g~~~~~v~~-----------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v 404 (556)
T TIGR01525 354 DLLNEGESQGKTVVFVAV-----------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404 (556)
T ss_pred HHHHHHhhCCcEEEEEEE-----------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeE
Confidence 345668889999999882 34799999999999999999999999999 999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhh
Q psy8116 152 RMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 152 ~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~ 231 (591)
+++|||+..++..+++++|+. .+|++..|++|..+++.+.
T Consensus 405 ~ivTgd~~~~a~~i~~~lgi~-------------------------------------~~f~~~~p~~K~~~v~~l~--- 444 (556)
T TIGR01525 405 VMLTGDNRSAAEAVAAELGID-------------------------------------EVHAELLPEDKLAIVKELQ--- 444 (556)
T ss_pred EEEeCCCHHHHHHHHHHhCCC-------------------------------------eeeccCCHHHHHHHHHHHH---
Confidence 999999999999999999992 1456778999999999854
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV 311 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~ 311 (591)
..++.|+|+|||.||++|+++||+|++|| .+++.++++||+++.+++++.+.+++..||+.+.++++++.|.+.+|+
T Consensus 445 --~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~ 521 (556)
T TIGR01525 445 --EEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNL 521 (556)
T ss_pred --HcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q psy8116 312 VAVIVAFIGA 321 (591)
Q Consensus 312 ~~~~~~~~~~ 321 (591)
+.+.+++.+.
T Consensus 522 ~~i~~a~~g~ 531 (556)
T TIGR01525 522 VAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHh
Confidence 9998887664
No 31
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=99.90 E-value=2.5e-23 Score=213.75 Aligned_cols=248 Identities=29% Similarity=0.439 Sum_probs=182.1
Q ss_pred eccCCcccceeeeEEeeCCCCcEEEEE--echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEe
Q psy8116 15 HFQLSAARALMKVTVIPRKGGGYRSLP--TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRD 92 (591)
Q Consensus 15 ~fpF~s~rk~msv~v~~~~~~~~~~~~--~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~ 92 (591)
..||+++.|+.. + +.+++ ..+.. .+.|.+.-+. .+|. +.++ ++...++-++.|=-.|+++.
T Consensus 372 fvpFtA~TRmSG-v--d~~~~-~~irKGA~dai~~~v~~---~~g~---~p~~-----l~~~~~~vs~~GGTPL~V~~-- 434 (681)
T COG2216 372 FVPFTAQTRMSG-V--DLPGG-REIRKGAVDAIRRYVRE---RGGH---IPED-----LDAAVDEVSRLGGTPLVVVE-- 434 (681)
T ss_pred eeecceeccccc-c--cCCCC-ceeecccHHHHHHHHHh---cCCC---CCHH-----HHHHHHHHHhcCCCceEEEE--
Confidence 347776665554 2 33444 33444 7777766542 2232 1121 34566778889988888872
Q ss_pred cCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 93 FVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
|-.++|++.++|-++|+.+|-+.+||+.||+.+|+||||+.||..||++.|+.
T Consensus 435 ---------------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 435 ---------------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred ---------------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 34689999999999999999999999999999999999999999999999993
Q ss_pred CCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhh
Q psy8116 173 KPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPAL 252 (591)
Q Consensus 173 ~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mL 252 (591)
+ ..+.++|++|.++++. -|..++.|+|+|||+||+|+|
T Consensus 488 d-------------------------------------fiAeatPEdK~~~I~~-----eQ~~grlVAMtGDGTNDAPAL 525 (681)
T COG2216 488 D-------------------------------------FIAEATPEDKLALIRQ-----EQAEGRLVAMTGDGTNDAPAL 525 (681)
T ss_pred h-------------------------------------hhhcCChHHHHHHHHH-----HHhcCcEEEEcCCCCCcchhh
Confidence 1 3467899999999997 578899999999999999999
Q ss_pred hcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHHHHHhhcc------
Q psy8116 253 KKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV---VAVIVAFIGACA------ 323 (591)
Q Consensus 253 k~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~---~~~~~~~~~~~~------ 323 (591)
.+||||+||. +|+..||||+.+|=.|.|...+.+.++-|+...-.=-....|++..-+ ++++++.+...+
T Consensus 526 AqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~l 604 (681)
T COG2216 526 AQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGAL 604 (681)
T ss_pred hhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccce
Confidence 9999999998 899999999999999999999999999998866443333444443322 233333333322
Q ss_pred ---CCCCchhHHH-HHHHHHHH-hhhhhhhh
Q psy8116 324 ---VQDSPLKAVQ-MLWVNLIM-DTLASLAL 349 (591)
Q Consensus 324 ---~~~~pl~~~q-~l~~nli~-~~~~~l~l 349 (591)
...+|-+++. -+.+|-+. ..+..++|
T Consensus 605 NiM~L~sP~SAilSAlIfNAlIIv~LIPLAl 635 (681)
T COG2216 605 NIMHLHSPQSAILSALIFNALIIVALIPLAL 635 (681)
T ss_pred eecccCCcHHHHHHHHHHHHHHHHHhHHHHh
Confidence 3467777654 34455433 33444444
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.90 E-value=9.3e-23 Score=236.70 Aligned_cols=175 Identities=32% Similarity=0.478 Sum_probs=159.9
Q ss_pred HHHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEE
Q psy8116 72 RNVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITV 151 (591)
Q Consensus 72 ~~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v 151 (591)
++.+++++.+|.+++.+|+ |..++|++++.|+++|+++++|++|++.|+++
T Consensus 619 ~~~~~~~~~~g~~~v~va~-----------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v 669 (834)
T PRK10671 619 EAEITAQASQGATPVLLAV-----------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRL 669 (834)
T ss_pred HHHHHHHHhCCCeEEEEEE-----------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeE
Confidence 3456778899999999984 22589999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhh
Q psy8116 152 RMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 152 ~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~ 231 (591)
+|+|||+..++..+++++|+. .++++..|++|.++++.+
T Consensus 670 ~~~Tgd~~~~a~~ia~~lgi~-------------------------------------~~~~~~~p~~K~~~i~~l---- 708 (834)
T PRK10671 670 VMLTGDNPTTANAIAKEAGID-------------------------------------EVIAGVLPDGKAEAIKRL---- 708 (834)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-------------------------------------EEEeCCCHHHHHHHHHHH----
Confidence 999999999999999999993 155677899999999984
Q ss_pred cCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy8116 232 VSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNV 311 (591)
Q Consensus 232 ~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~ 311 (591)
+..++.|+|+|||.||++|++.||+|+||| ++++.++++||+++.+++++++.++++.||..+.+|++++.|.+.+|+
T Consensus 709 -~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~ 786 (834)
T PRK10671 709 -QSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNS 786 (834)
T ss_pred -hhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556889999999999999999999999999 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy8116 312 VAVIVAF 318 (591)
Q Consensus 312 ~~~~~~~ 318 (591)
+.+.+++
T Consensus 787 ~~i~~a~ 793 (834)
T PRK10671 787 LGIPIAA 793 (834)
T ss_pred HHHHHHH
Confidence 9988775
No 33
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.90 E-value=1.4e-22 Score=224.11 Aligned_cols=163 Identities=34% Similarity=0.532 Sum_probs=150.0
Q ss_pred hccCcEEEEEeeccCCCCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccc
Q psy8116 117 IVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGI-TVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANG 195 (591)
Q Consensus 117 ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~ 195 (591)
+..|..++|.+.++|+++|+++++|+.|+++|+ ++.++|||+..++..+++++|+..
T Consensus 347 v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------- 404 (536)
T TIGR01512 347 VARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------- 404 (536)
T ss_pred EEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh----------------------
Confidence 457899999999999999999999999999999 999999999999999999999931
Q ss_pred hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc
Q psy8116 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI 275 (591)
Q Consensus 196 ~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~ 275 (591)
++++..|++|..+++.+ +..++.|+|+|||.||++|++.||+|++||.++++.++++||+
T Consensus 405 ---------------~f~~~~p~~K~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 405 ---------------VHAELLPEDKLEIVKEL-----REKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADV 464 (536)
T ss_pred ---------------hhhccCcHHHHHHHHHH-----HhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCE
Confidence 34566799999999985 4556899999999999999999999999996689999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q psy8116 276 ILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGA 321 (591)
Q Consensus 276 vl~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~ 321 (591)
++.+++++.+.+++..||..+.++++++.|.+.+|++.+.++++|.
T Consensus 465 vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 465 VLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGV 510 (536)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998888663
No 34
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.88 E-value=1.2e-21 Score=217.57 Aligned_cols=161 Identities=39% Similarity=0.561 Sum_probs=147.6
Q ss_pred hccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccch
Q psy8116 117 IVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGD 196 (591)
Q Consensus 117 ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~ 196 (591)
+..|.+++|.++++|+++|+++++|++|++.|++++|+|||+..++..+++++|+.
T Consensus 390 ~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------ 445 (562)
T TIGR01511 390 VAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------ 445 (562)
T ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------
Confidence 45688999999999999999999999999999999999999999999999999991
Q ss_pred hhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccccc
Q psy8116 197 VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII 276 (591)
Q Consensus 197 ~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~v 276 (591)
++++..|++|.+.++.++ .+++.|+|+|||.||++|+++||+|++|| .+++.++++||++
T Consensus 446 --------------~~~~~~p~~K~~~v~~l~-----~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advv 505 (562)
T TIGR01511 446 --------------VRAEVLPDDKAALIKELQ-----EKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVV 505 (562)
T ss_pred --------------EEccCChHHHHHHHHHHH-----HcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEE
Confidence 234567999999999853 45789999999999999999999999999 6899999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q psy8116 277 LTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGA 321 (591)
Q Consensus 277 l~~~~~~~i~~~i~~gR~~~~~i~~~~~f~l~~n~~~~~~~~~~~ 321 (591)
+.+++++.+.+++..||..+.++++++.|.+.+|++.+.+++.+.
T Consensus 506 l~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 506 LMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999887776443
No 35
>KOG4383|consensus
Probab=99.85 E-value=6.1e-21 Score=200.25 Aligned_cols=477 Identities=13% Similarity=0.166 Sum_probs=300.3
Q ss_pred echhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEecCCC-------cc-c---------ccc--
Q psy8116 42 TKVLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVPG-------KA-E---------INQ-- 102 (591)
Q Consensus 42 ~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~~~~~-------~~-~---------~~~-- 102 (591)
.+.+.+.|+.+|+ +.+..|++..+|.+. ++...+-...| .++++|||+.... ++ + +.-
T Consensus 700 ad~~~eACTdfWd-Gadi~PlSg~dkkkV-~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~c 776 (1354)
T KOG4383|consen 700 ADFFEEACTDFWD-GADIIPLSGRDKKKV-KDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETAC 776 (1354)
T ss_pred HHHHHHHhhhhcC-CceeeecCcchHHHH-HHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhhc
Confidence 6788999999998 678899999888775 34444444445 4999999986311 00 0 000
Q ss_pred --cc------cCCCCCC------------chhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy8116 103 --VH------IDTEPNW------------DDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTA 162 (591)
Q Consensus 103 --~~------~~~~~~~------------~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta 162 (591)
.+ +..+..| +..++.-.+.+|.|++..+.+.+++....|+.|.++.|+++..|-++....
T Consensus 777 elp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkS 856 (1354)
T KOG4383|consen 777 ELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKS 856 (1354)
T ss_pred cCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHH
Confidence 00 0000011 111344578999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceEEecch------------------------hhHHhhhcc-cc----------------------
Q psy8116 163 RSIATKCGILKPGDDFLILEGK------------------------EFNRRVRDA-NG---------------------- 195 (591)
Q Consensus 163 ~~ia~~~gi~~~~~~~i~l~g~------------------------~~~~~~~~~-~~---------------------- 195 (591)
+..|.++||...+++.+.+... ++++...++ ++
T Consensus 857 kVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi 936 (1354)
T KOG4383|consen 857 KVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDI 936 (1354)
T ss_pred HHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccch
Confidence 9999999999988888877421 122221111 11
Q ss_pred -------------------hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCC--CHHhhhc
Q psy8116 196 -------------------DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN--DGPALKK 254 (591)
Q Consensus 196 -------------------~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~N--D~~mLk~ 254 (591)
+.+...+|++..-+..|..++|+.--++++. +|++|++++++|...| ....+-+
T Consensus 937 ~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeI-----MQE~GEVtcclGS~aN~rNSciflk 1011 (1354)
T KOG4383|consen 937 AKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEI-----MQENGEVTCCLGSCANARNSCIFLK 1011 (1354)
T ss_pred hhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHH-----HHHcCcEEEEeccccccccceEEEc
Confidence 0001112223233457889999999999998 5678999999999998 4567788
Q ss_pred CCeeeeeCCC------------ccH------------------HHHhcccccccCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy8116 255 ADVGFAMGIA------------GTD------------------VAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQ 304 (591)
Q Consensus 255 A~vGiamg~~------------~~~------------------~ak~aad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~ 304 (591)
||++||+..- ++. ...-++|+.+.....-.+..+|+.+|.....+++++.
T Consensus 1012 adISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfL 1091 (1354)
T KOG4383|consen 1012 ADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFL 1091 (1354)
T ss_pred cceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 9999987521 111 1112344444444455678889999999999999999
Q ss_pred HHHHHhHHHHHHHHHhhccCCCCchhHHHHHHHHHHHhhhhhhh-hccCCCCcccccCCCCCCCCCCCCHHHHHHHHHH-
Q psy8116 305 FQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA-LATEMPTPDLLLRKPYGRTKPLISKTMMKNILGQ- 382 (591)
Q Consensus 305 f~l~~n~~~~~~~~~~~~~~~~~pl~~~q~l~~nli~~~~~~l~-l~~~~~~~~l~~~~P~~~~~~~i~~~~~~~~~~~- 382 (591)
|.++..+..+++.|++.++..+..++-.+++|.+++..++..++ |...++.+.+|.+...+.-+. |-++.-...+..
T Consensus 1092 FiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagKNlqe-IPKk~kh~fllcF 1170 (1354)
T KOG4383|consen 1092 FILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGKNLQE-IPKKEKHKFLLCF 1170 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccCChhh-cccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888887 555666666665543222222 222211111111
Q ss_pred ------HHHHHHHHHHHHHH--hhccc---CCCCCC---CCCCCCCCc----------chhhhHHHHHHHHHHhhhhhhc
Q psy8116 383 ------AIYQLTVVFTLLFV--GDKLL---DIPTGR---GAEFGSEPT----------QHFTVIFNTFVFMTLFNEINAR 438 (591)
Q Consensus 383 ------~i~~~~~~~~~~~~--~~~~~---~~~~~~---~~~~~~~~~----------~~~t~~f~~~v~~~~~~~~~~r 438 (591)
++....++|.+... ....- ++.... +......+. .++...-.-++.-.+|..+.
T Consensus 1171 ilkFsls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL~saQkl~aa~iilH~ifiqIT-- 1248 (1354)
T KOG4383|consen 1171 ILKFSLSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANGLGSAQKLLAAEIILHIIFIQIT-- 1248 (1354)
T ss_pred HHHhhhhHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhhhhhHHHHHHHHHHHHhheeEEE--
Confidence 11122233333221 11111 110000 000000010 01112222234444444443
Q ss_pred cccCcccc-cccCccCHHHHHHH----HHHHHHHHHHHhhc-----cccccccCCChhHHHHHHHHHHHHHHHHHHHHhh
Q psy8116 439 KIHGQRNV-FEGFFSNPIFYSIW----FITAASQVFIIQFG-----REAFSTKSLTLEQWLWCLFFGIGTLLWGQVVTTV 508 (591)
Q Consensus 439 ~~~~~~~~-f~~~~~n~~~~~~~----~~~~~~~~~~v~~~-----~~~F~~~~l~~~~w~~~l~~~~~~ll~~eiik~i 508 (591)
.+|..++. |+..++|.||-+.+ +...+...+..+.+ +.-|+....++..|++..++.+++++.+|++|..
T Consensus 1249 hih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiKih 1328 (1354)
T KOG4383|consen 1249 HIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIKIH 1328 (1354)
T ss_pred EEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHHHH
Confidence 23433343 34556665543321 11111122223333 4457777778888999888888889999999999
Q ss_pred ccCccccccccCCCCCcchhh
Q psy8116 509 PTRKLPKILSWGRGHPEEYTE 529 (591)
Q Consensus 509 ~~~~~~~~~~~g~~~~~~~~~ 529 (591)
+.|.+.|.+++.+.+.+++..
T Consensus 1329 eIR~~~R~QkRqK~eFdTKLG 1349 (1354)
T KOG4383|consen 1329 EIRQFTREQKRQKFEFDTKLG 1349 (1354)
T ss_pred HHHHHHHHHHhhhheeccccc
Confidence 999999999887777766543
No 36
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.62 E-value=3.6e-15 Score=151.28 Aligned_cols=159 Identities=22% Similarity=0.269 Sum_probs=111.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH----------------------H
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN----------------------R 188 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~----------------------~ 188 (591)
..+.+.+.++|++++++|++|+++|||+...+..+.+++|+..+..+.++.||..+. +
T Consensus 19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 98 (270)
T PRK10513 19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTALSYDDYLYLEK 98 (270)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecCCCHHHHHHHHH
Confidence 458999999999999999999999999999999999999985433344544543211 0
Q ss_pred hhhc---------c--------cch-hh-------------------------------------HHHHhhhc----Ccc
Q psy8116 189 RVRD---------A--------NGD-VQ-------------------------------------QHLLDKVW----PRL 209 (591)
Q Consensus 189 ~~~~---------~--------~~~-~~-------------------------------------~~~l~~~~----~~~ 209 (591)
.... . ... .. ......+. ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (270)
T PRK10513 99 LSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAAIARIPAEVKERY 178 (270)
T ss_pred HHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHHHHHhHHHhcCcE
Confidence 0000 0 000 00 00000000 011
Q ss_pred eEE------EecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC
Q psy8116 210 RVL------ARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 281 (591)
Q Consensus 210 ~v~------~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~ 281 (591)
.+. ...+| .+|+..++.+++++ +...+.|+++|||.||++||+.|++|+||+ |+.+.+|++||+|+.+++
T Consensus 179 ~~~~s~~~~~eI~~~gvsKg~al~~l~~~~-gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~ 256 (270)
T PRK10513 179 TVLKSAPYFLEILDKRVNKGTGVKSLAEHL-GIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNL 256 (270)
T ss_pred EEEEecCeeEEEeCCCCChHHHHHHHHHHh-CCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCC
Confidence 111 11222 39999999999984 555556667799999999999999999999 688888999999999999
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
.+++.++|++
T Consensus 257 ~dGva~~i~~ 266 (270)
T PRK10513 257 EDGVAFAIEK 266 (270)
T ss_pred cchHHHHHHH
Confidence 9999988864
No 37
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.60 E-value=1e-15 Score=149.17 Aligned_cols=97 Identities=42% Similarity=0.642 Sum_probs=88.4
Q ss_pred CcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhH
Q psy8116 120 NLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQ 199 (591)
Q Consensus 120 ~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~ 199 (591)
++.++|.+.+.|+++|+++++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 78999999999999999999999999999999999999999999999999992
Q ss_pred HHHhhhcCcceEEEec--ChhhH--HHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC
Q psy8116 200 HLLDKVWPRLRVLARS--SPTDK--YTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD 256 (591)
Q Consensus 200 ~~l~~~~~~~~v~~r~--sp~~K--~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~ 256 (591)
+..++++. +|++| ..+++. ++.+++.|+|+|||.||++|+++||
T Consensus 168 --------~~~v~a~~~~kP~~k~~~~~i~~-----l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 --------DSIVFARVIGKPEPKIFLRIIKE-----LQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --------SEEEEESHETTTHHHHHHHHHHH-----HTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --------cccccccccccccchhHHHHHHH-----HhcCCCEEEEEccCHHHHHHHHhCc
Confidence 22478888 99999 777777 5656669999999999999999997
No 38
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.57 E-value=2e-14 Score=146.04 Aligned_cols=156 Identities=14% Similarity=0.136 Sum_probs=108.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH------------------Hhh--
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN------------------RRV-- 190 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~------------------~~~-- 190 (591)
..+.+.+.++|++++++|++|+++|||+...+..+.+++|+.. .+++.||..+. +.+
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~ 94 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA---YLITGNGTRVHSLEGELLHRQDLPADVAELVLHQ 94 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC---cEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999842 33444442110 000
Q ss_pred -hcc-----------------cc-----------------------------------hhhH---HHHhhhcC-cceE--
Q psy8116 191 -RDA-----------------NG-----------------------------------DVQQ---HLLDKVWP-RLRV-- 211 (591)
Q Consensus 191 -~~~-----------------~~-----------------------------------~~~~---~~l~~~~~-~~~v-- 211 (591)
... .. +... ..+.+... ...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 174 (272)
T PRK15126 95 QWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCF 174 (272)
T ss_pred hhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 000 00 0000 00111111 1111
Q ss_pred ----EEecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc--cccCCChh
Q psy8116 212 ----LARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI--ILTDDNFS 283 (591)
Q Consensus 212 ----~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~--vl~~~~~~ 283 (591)
+...+| .+|+..++.+++++ +...+.|+++|||.||++||+.|++||||| |+.+.+|++||+ ++.+++.+
T Consensus 175 s~~~~~eI~~~g~sKg~al~~l~~~~-gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~ed 252 (272)
T PRK15126 175 SATDCLEVLPVGCNKGAALAVLSQHL-GLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQ 252 (272)
T ss_pred cCCcEEEeecCCCChHHHHHHHHHHh-CCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcch
Confidence 112222 28999999999984 545555666699999999999999999999 688888999996 77788899
Q ss_pred HHHHHHHH
Q psy8116 284 SIVKAVMW 291 (591)
Q Consensus 284 ~i~~~i~~ 291 (591)
++.++|++
T Consensus 253 Gva~~l~~ 260 (272)
T PRK15126 253 AVSHYLTH 260 (272)
T ss_pred HHHHHHHH
Confidence 99988863
No 39
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.56 E-value=2.8e-14 Score=144.29 Aligned_cols=154 Identities=23% Similarity=0.339 Sum_probs=112.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh--------------------hhc
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR--------------------VRD 192 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~--------------------~~~ 192 (591)
+.+.+.++|+++++.|++|+++|||+...+..+.+++++.. .+++.||..+... ...
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDVEELLELLED 97 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999953 5556665421110 000
Q ss_pred c----------c------------------------------------------chhhHH---HHhhhcC-cceEEEecC
Q psy8116 193 A----------N------------------------------------------GDVQQH---LLDKVWP-RLRVLARSS 216 (591)
Q Consensus 193 ~----------~------------------------------------------~~~~~~---~l~~~~~-~~~v~~r~s 216 (591)
. . .+...+ .+.+... ....+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~ 177 (264)
T COG0561 98 FQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSG 177 (264)
T ss_pred ccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcC
Confidence 0 0 000000 0111111 122233333
Q ss_pred h---------hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHH
Q psy8116 217 P---------TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 217 p---------~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
+ .+|+.+++.++++ ++...+.|+++||+.||.+||+.|+.||||| ++++.+|+.||++...++.+++.+
T Consensus 178 ~~~lei~~~g~~K~~al~~l~~~-lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~ 255 (264)
T COG0561 178 PISLDITPKGVSKGYALQRLAKL-LGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAE 255 (264)
T ss_pred CceEEEecCCCchHHHHHHHHHH-hCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHH
Confidence 2 3999999999997 4555556666699999999999999999999 569999999999989999999999
Q ss_pred HHHH
Q psy8116 288 AVMW 291 (591)
Q Consensus 288 ~i~~ 291 (591)
+|++
T Consensus 256 ~l~~ 259 (264)
T COG0561 256 ALEK 259 (264)
T ss_pred HHHH
Confidence 9885
No 40
>PRK10976 putative hydrolase; Provisional
Probab=99.56 E-value=4.5e-14 Score=142.91 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=107.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH---------------------Hh
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN---------------------RR 189 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~---------------------~~ 189 (591)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+.. .+++.||..+. +.
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~ 94 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS---YMITSNGARVHDTDGNLIFSHNLDRDIASDLFGV 94 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC---eEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHh
Confidence 3588999999999999999999999999999999999999742 23444432110 00
Q ss_pred hhcc----------cc-------hhh---------------------------------HH-------HHhhhc-CcceE
Q psy8116 190 VRDA----------NG-------DVQ---------------------------------QH-------LLDKVW-PRLRV 211 (591)
Q Consensus 190 ~~~~----------~~-------~~~---------------------------------~~-------~l~~~~-~~~~v 211 (591)
.... .. ... .+ .+.+.+ ..+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~ 174 (266)
T PRK10976 95 VHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNV 174 (266)
T ss_pred hcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEE
Confidence 0000 00 000 00 000000 01111
Q ss_pred ------EEecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc--ccccCCC
Q psy8116 212 ------LARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD--IILTDDN 281 (591)
Q Consensus 212 ------~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad--~vl~~~~ 281 (591)
+....| .+|+..++.+++++ +...+.|+++|||.||++||+.|++||||+ |+.+.+|++|| .|+.+++
T Consensus 175 ~~s~~~~~eI~~~gvsKg~al~~l~~~l-gi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~ 252 (266)
T PRK10976 175 SFSTLTCLEVMAGGVSKGHALEAVAKKL-GYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNA 252 (266)
T ss_pred EEeCCceEEEEcCCCChHHHHHHHHHHc-CCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCc
Confidence 112222 28999999999984 555555666699999999999999999999 77888899987 6788889
Q ss_pred hhHHHHHHHH
Q psy8116 282 FSSIVKAVMW 291 (591)
Q Consensus 282 ~~~i~~~i~~ 291 (591)
.+++.++|++
T Consensus 253 edGVa~~l~~ 262 (266)
T PRK10976 253 DDAVPHYLRK 262 (266)
T ss_pred hHHHHHHHHH
Confidence 9999988863
No 41
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.53 E-value=6.7e-14 Score=138.38 Aligned_cols=155 Identities=23% Similarity=0.277 Sum_probs=110.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH--------------------hhh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR--------------------RVR 191 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~--------------------~~~ 191 (591)
++.+.+.++|++++++|++++++|||+...+..+++.+|+. ...++.+|..+.. ...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS---GPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999984 2344444432110 000
Q ss_pred c-----------ccc---------------hhhHHHHhhhcCcceE-----EEecCh--hhHHHHHHHHHHhhcCCCCcE
Q psy8116 192 D-----------ANG---------------DVQQHLLDKVWPRLRV-----LARSSP--TDKYTLVKGIIDSKVSDSREV 238 (591)
Q Consensus 192 ~-----------~~~---------------~~~~~~l~~~~~~~~v-----~~r~sp--~~K~~~v~~l~~~~~~~~~~~ 238 (591)
. ... +.....+........+ +....| .+|+..++.+++++ +...+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~-~i~~~~ 175 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELM-GIDPEE 175 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHh-CCCHHH
Confidence 0 000 0001111111111111 112223 37999999999984 555566
Q ss_pred EEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 239 VAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 239 va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
++++||+.||.+|++.|++|+||+ ++.+.+|++||+++.+++.+++.++|++
T Consensus 176 ~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 176 VAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred EEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 777799999999999999999999 6788889999999999999999998864
No 42
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.51 E-value=1.8e-13 Score=117.14 Aligned_cols=127 Identities=22% Similarity=0.336 Sum_probs=107.4
Q ss_pred cEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHH
Q psy8116 121 LTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200 (591)
Q Consensus 121 l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 200 (591)
....+.++--.++-++++++|+.|++. +++.++|||..-+....|+..|+.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~---------------------------- 69 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP---------------------------- 69 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc----------------------------
Confidence 456788888899999999999999999 999999999999999999999983
Q ss_pred HHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee-CC-CccHHHHhccccccc
Q psy8116 201 LLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM-GI-AGTDVAKEASDIILT 278 (591)
Q Consensus 201 ~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam-g~-~~~~~ak~aad~vl~ 278 (591)
.-++++...|+.|..+++. ++.+++.|.|+|||.||.+||+.||+||+. ++ ..++-+.++||+++.
T Consensus 70 -------~~rv~a~a~~e~K~~ii~e-----Lkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 70 -------VERVFAGADPEMKAKIIRE-----LKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred -------eeeeecccCHHHHHHHHHH-----hcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 2257888899999999998 456789999999999999999999999874 42 344556789999998
Q ss_pred CCChhHHHHHHH
Q psy8116 279 DDNFSSIVKAVM 290 (591)
Q Consensus 279 ~~~~~~i~~~i~ 290 (591)
+...+++++.
T Consensus 138 --~i~e~ldl~~ 147 (152)
T COG4087 138 --EIAEILDLLK 147 (152)
T ss_pred --hHHHHHHHhh
Confidence 6666665543
No 43
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.50 E-value=1.3e-13 Score=137.32 Aligned_cols=155 Identities=26% Similarity=0.373 Sum_probs=110.0
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhh-H--------------------H
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEF-N--------------------R 188 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~-~--------------------~ 188 (591)
...+.+++.++|++++++|++++++|||+...+..+..++++. .+.++.+|.-+ . .
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~ 89 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYEKPIDSDDVKKILK 89 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchhhheeccchhheee
Confidence 3458899999999999999999999999999999999999984 45555555432 0 0
Q ss_pred hhhc----------------cc--c---------------------------------------hhhHHHHhhhcCcceE
Q psy8116 189 RVRD----------------AN--G---------------------------------------DVQQHLLDKVWPRLRV 211 (591)
Q Consensus 189 ~~~~----------------~~--~---------------------------------------~~~~~~l~~~~~~~~v 211 (591)
.... .. . +.....+.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~ 169 (254)
T PF08282_consen 90 YLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLID 169 (254)
T ss_dssp HHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEE
T ss_pred hhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCccee
Confidence 0000 00 0 0001111122222112
Q ss_pred EEe-------c--ChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCCh
Q psy8116 212 LAR-------S--SPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF 282 (591)
Q Consensus 212 ~~r-------~--sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~ 282 (591)
+.+ . ...+|+.+++.+++++ +...+.++++||+.||.+||+.||+|+||+ ++++..|..||+++..++-
T Consensus 170 ~~~~~~~~lei~~~~vsK~~ai~~l~~~~-~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 170 VVRSSPYFLEITPKGVSKGSAIKYLLEYL-GISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNND 247 (254)
T ss_dssp EEEEETTEEEEEETTSSHHHHHHHHHHHH-TTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTC
T ss_pred EEEecccceEEeeCCCCHHHHHHHHhhhc-ccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCC
Confidence 222 2 2349999999999885 555556666699999999999999999999 6788889999999998888
Q ss_pred hHHHHHH
Q psy8116 283 SSIVKAV 289 (591)
Q Consensus 283 ~~i~~~i 289 (591)
+++.++|
T Consensus 248 ~gv~~~i 254 (254)
T PF08282_consen 248 DGVAKAI 254 (254)
T ss_dssp THHHHHH
T ss_pred ChHHHhC
Confidence 9998765
No 44
>PLN02887 hydrolase family protein
Probab=99.50 E-value=6e-13 Score=146.50 Aligned_cols=71 Identities=25% Similarity=0.361 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
+|+..++.+++++ +...+.|+++|||.||++||+.|++||||| |+.+.+|++||+|+.+++.+++.++|++
T Consensus 507 SKG~ALk~L~e~l-GI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHL-GVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHc-CCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 8999999999985 555556666699999999999999999999 6888889999999999999999998874
No 45
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.49 E-value=2e-13 Score=134.42 Aligned_cols=154 Identities=22% Similarity=0.268 Sum_probs=107.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh----------hh---------c
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR----------VR---------D 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~----------~~---------~ 192 (591)
.+.+++.++|++++++|++++++|||+...+..+++.+|+. ...++.+|..+... +. .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 48899999999999999999999999999999999999963 33444444321100 00 0
Q ss_pred cc--------------c----------hhhHHHHhhhcCcceE-----EEecCh--hhHHHHHHHHHHhhcCCCCcEEEE
Q psy8116 193 AN--------------G----------DVQQHLLDKVWPRLRV-----LARSSP--TDKYTLVKGIIDSKVSDSREVVAV 241 (591)
Q Consensus 193 ~~--------------~----------~~~~~~l~~~~~~~~v-----~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~ 241 (591)
.. . +.....++.......+ +....| .+|+..++.+++++ +...+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~-~i~~~~~i~ 170 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKL-GIKPGETLV 170 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHh-CCCHHHEEE
Confidence 00 0 0000111111111111 112222 49999999999884 555566777
Q ss_pred ECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhH----HHHHHH
Q psy8116 242 TGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS----IVKAVM 290 (591)
Q Consensus 242 iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~----i~~~i~ 290 (591)
+||+.||++|++.|++|+||+ |+.+.+|+.||+|+.+++.++ +.++|+
T Consensus 171 ~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 171 CGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred ECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 799999999999999999999 678888999999998888888 666655
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.46 E-value=1.1e-13 Score=135.42 Aligned_cols=151 Identities=22% Similarity=0.274 Sum_probs=107.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh----hhc--ccc----------
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR----VRD--ANG---------- 195 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~----~~~--~~~---------- 195 (591)
++.+++.++|++|+++|++|+++|||+...+..+++.+++.. .+++.+|..+... ... ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKR 94 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecccchhhHHHhhhhh
Confidence 488999999999999999999999999999999999998742 3444444321110 000 000
Q ss_pred ------------------------hhhHHHHhhhcCcceE-----EEe--cChhhHHHHHHHHHHhhcCCCCcEEEEECC
Q psy8116 196 ------------------------DVQQHLLDKVWPRLRV-----LAR--SSPTDKYTLVKGIIDSKVSDSREVVAVTGD 244 (591)
Q Consensus 196 ------------------------~~~~~~l~~~~~~~~v-----~~r--~sp~~K~~~v~~l~~~~~~~~~~~va~iGD 244 (591)
+.....+.. ....+ +.. ....+|+..++.++++ ++...+.++++||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~-~~i~~~~~i~iGD 171 (215)
T TIGR01487 95 FPRDRLSNEYPRASLVIMREGKDVDEVREIIKE--RGLNLVDSGFAIHIMKKGVDKGVGVEKLKEL-LGIKPEEVAAIGD 171 (215)
T ss_pred hhhhhcccccceeEEEEecCCccHHHHHHHHHh--CCeEEEecCceEEEecCCCChHHHHHHHHHH-hCCCHHHEEEECC
Confidence 000001111 01111 111 2235999999999987 4555566778899
Q ss_pred CCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 245 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 245 g~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
+.||.+|++.|++|+||+ ++.+.+|+.||+++.+++.+++.++|
T Consensus 172 s~ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 172 SENDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred CHHHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999999999 68888899999999888888887653
No 47
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.45 E-value=4.9e-13 Score=135.67 Aligned_cols=72 Identities=26% Similarity=0.351 Sum_probs=62.2
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~~ 291 (591)
.+|+..++.+++++ +...+.++++||+.||++|++.|++|+||| ++.+..|++||+++.+++.+++.++|++
T Consensus 198 ~~K~~~l~~l~~~~-gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 198 NSKGKRLTQWVEAQ-GWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred CChHHHHHHHHHHc-CCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 38999999999884 555566777799999999999999999999 5677779999999999999999998863
No 48
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.38 E-value=2.3e-12 Score=130.80 Aligned_cols=157 Identities=12% Similarity=0.095 Sum_probs=106.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH-----------------------
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR----------------------- 188 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~----------------------- 188 (591)
.+.+.+.++|++|+++|++++++|||....+..+++++|+.. .++++.||..+..
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--LPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIR 101 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--CcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHH
Confidence 466789999999999999999999999999999999999831 2345555542210
Q ss_pred -h---hhcc-cc---------h---------------------------------hhHHHHhhhcC-cceE-----EEec
Q psy8116 189 -R---VRDA-NG---------D---------------------------------VQQHLLDKVWP-RLRV-----LARS 215 (591)
Q Consensus 189 -~---~~~~-~~---------~---------------------------------~~~~~l~~~~~-~~~v-----~~r~ 215 (591)
. .... .. . ...+..+.+.. .+.+ +...
T Consensus 102 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi 181 (271)
T PRK03669 102 QVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHV 181 (271)
T ss_pred HHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEE
Confidence 0 0000 00 0 00000000000 1111 1122
Q ss_pred Ch--hhHHHHHHHHHHhhcCC---CCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH-----HHhcccccccCCChhHH
Q psy8116 216 SP--TDKYTLVKGIIDSKVSD---SREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV-----AKEASDIILTDDNFSSI 285 (591)
Q Consensus 216 sp--~~K~~~v~~l~~~~~~~---~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~-----ak~aad~vl~~~~~~~i 285 (591)
.| .+|+..++.+++++ +. ..+.|+++|||.||++||+.|++|||||++..+. .+..+|+++....-+++
T Consensus 182 ~~~g~sKg~al~~l~~~l-gi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~ 260 (271)
T PRK03669 182 LDASAGKDQAANWLIATY-QQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGW 260 (271)
T ss_pred ecCCCCHHHHHHHHHHHH-HhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHH
Confidence 22 39999999999985 44 5556666699999999999999999999655331 35589999998889999
Q ss_pred HHHHHH
Q psy8116 286 VKAVMW 291 (591)
Q Consensus 286 ~~~i~~ 291 (591)
.+++++
T Consensus 261 ~~~l~~ 266 (271)
T PRK03669 261 REGLDH 266 (271)
T ss_pred HHHHHH
Confidence 988874
No 49
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.33 E-value=5.7e-12 Score=126.79 Aligned_cols=154 Identities=21% Similarity=0.327 Sum_probs=106.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhH---------------------Hh
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFN---------------------RR 189 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~---------------------~~ 189 (591)
.++.+++.++|++++++|++++++|||+...+..+..++|+.. .+++.||..+. +.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~---~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~ 91 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT---PFITANGAAVIDDQGEILYKKPLDLDLVEEILNF 91 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC---CEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHH
Confidence 3588999999999999999999999999999999999998742 33333332110 00
Q ss_pred hhc-----------------cc-c------------------------------------hhhHHHHhhhc-----Ccce
Q psy8116 190 VRD-----------------AN-G------------------------------------DVQQHLLDKVW-----PRLR 210 (591)
Q Consensus 190 ~~~-----------------~~-~------------------------------------~~~~~~l~~~~-----~~~~ 210 (591)
... .. . +...+..+.+. ..+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (256)
T TIGR00099 92 LKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVS 171 (256)
T ss_pred HHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEE
Confidence 000 00 0 00000000010 1111
Q ss_pred E------EEecCh--hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCCh
Q psy8116 211 V------LARSSP--TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF 282 (591)
Q Consensus 211 v------~~r~sp--~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~ 282 (591)
+ +....| .+|+..++.+++. +....+.++++||+.||++|++.|++|+||+ ++.+.+|+.||+++.+++.
T Consensus 172 ~~~s~~~~leI~~~~~~K~~~i~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 172 VVSSGPYSIEITAKGVSKGSALQSLAEA-LGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNE 249 (256)
T ss_pred EEEecCceEEecCCCCChHHHHHHHHHH-cCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCC
Confidence 1 112222 3899999999987 4555567777799999999999999999999 6778889999999998888
Q ss_pred hHHHHHH
Q psy8116 283 SSIVKAV 289 (591)
Q Consensus 283 ~~i~~~i 289 (591)
+++.++|
T Consensus 250 dGV~~~l 256 (256)
T TIGR00099 250 DGVALAL 256 (256)
T ss_pred cchhhhC
Confidence 8887653
No 50
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.32 E-value=1.1e-11 Score=124.67 Aligned_cols=155 Identities=16% Similarity=0.143 Sum_probs=102.9
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH------------------------
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR------------------------ 188 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~------------------------ 188 (591)
..+.+.++|++++++|++++++|||....+..+.+++|+. +..++.||..+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~---~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 93 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE---DPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRA 93 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC---CcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHH
Confidence 4456899999999999999999999999999999999984 2344444431110
Q ss_pred hhh---cc-cc-------hhh-----------------------------HHHHh---hhcC--cceE-----EEecC--
Q psy8116 189 RVR---DA-NG-------DVQ-----------------------------QHLLD---KVWP--RLRV-----LARSS-- 216 (591)
Q Consensus 189 ~~~---~~-~~-------~~~-----------------------------~~~l~---~~~~--~~~v-----~~r~s-- 216 (591)
.+. .. .. ... .+.+. .... .+.+ +....
T Consensus 94 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~ 173 (256)
T TIGR01486 94 RLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGA 173 (256)
T ss_pred HHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecC
Confidence 000 00 00 000 00000 0000 0111 11111
Q ss_pred hhhHHHHHHHHHHhhcCCC--CcEEEEECCCCCCHHhhhcCCeeeeeCCCcc--HHHHhc---ccccccCCChhHHHHHH
Q psy8116 217 PTDKYTLVKGIIDSKVSDS--REVVAVTGDGTNDGPALKKADVGFAMGIAGT--DVAKEA---SDIILTDDNFSSIVKAV 289 (591)
Q Consensus 217 p~~K~~~v~~l~~~~~~~~--~~~va~iGDg~ND~~mLk~A~vGiamg~~~~--~~ak~a---ad~vl~~~~~~~i~~~i 289 (591)
..+|+..++.+++++ +.. .+.++++||+.||.+|++.||+||||+|+.. +..|+. +++|+.+++.+++.+++
T Consensus 174 ~~~Kg~ai~~l~~~~-~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l 252 (256)
T TIGR01486 174 GSDKGKAANALKQFY-NQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREAL 252 (256)
T ss_pred CCCHHHHHHHHHHHH-hhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHH
Confidence 239999999999884 444 5667777999999999999999999995442 456776 45888888999999988
Q ss_pred HH
Q psy8116 290 MW 291 (591)
Q Consensus 290 ~~ 291 (591)
++
T Consensus 253 ~~ 254 (256)
T TIGR01486 253 EH 254 (256)
T ss_pred HH
Confidence 74
No 51
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.19 E-value=8.5e-11 Score=116.82 Aligned_cols=150 Identities=18% Similarity=0.239 Sum_probs=101.0
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH-------------------------hhhc
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR-------------------------RVRD 192 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~-------------------------~~~~ 192 (591)
.++++ ++++|++++++|||....+..+..++++..+ +.++..+|..+.. ....
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~-~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSP-DVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD 98 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCC-CEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc
Confidence 36666 6999999999999999999999999998533 2455566654210 0000
Q ss_pred ccc--------------------h---hhHH---HHhhhcCcceE-EE-----ecCh--hhHHHHHHHHHHhhcCCCCcE
Q psy8116 193 ANG--------------------D---VQQH---LLDKVWPRLRV-LA-----RSSP--TDKYTLVKGIIDSKVSDSREV 238 (591)
Q Consensus 193 ~~~--------------------~---~~~~---~l~~~~~~~~v-~~-----r~sp--~~K~~~v~~l~~~~~~~~~~~ 238 (591)
..+ + ...+ .+........+ .+ ...| .+|+..++.+++++ +...+.
T Consensus 99 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~-g~~~~~ 177 (236)
T TIGR02471 99 IPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRW-GLPLEQ 177 (236)
T ss_pred CCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHh-CCCHHH
Confidence 000 0 0000 11111111111 11 2233 39999999999884 444455
Q ss_pred EEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc----ccccCCChhHHHHHHHH
Q psy8116 239 VAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD----IILTDDNFSSIVKAVMW 291 (591)
Q Consensus 239 va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad----~vl~~~~~~~i~~~i~~ 291 (591)
++++||+.||.+|++.+++||+|+ ++.+..|+.|| ++...++-+++.++|.+
T Consensus 178 ~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 178 ILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred EEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 667799999999999999999999 57777799999 77777788999998874
No 52
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.17 E-value=2.2e-10 Score=116.49 Aligned_cols=157 Identities=15% Similarity=0.170 Sum_probs=104.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH---------------------
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR--------------------- 188 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~--------------------- 188 (591)
.+.+.+++.++|++|+++|++++++|||....+..+++++|+.. ++++.+|..+..
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~ 95 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED---PFIVENGAAIYIPKNYFPFQPDGERLKGDYWVI 95 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC---CEEEEcCcEEEecccccccCCccccccCCceEE
Confidence 34577889999999999999999999999999999999999843 344444432210
Q ss_pred -----------hhh---cc-c-------c----h--------hh--HHHHhhhcC----------------------cce
Q psy8116 189 -----------RVR---DA-N-------G----D--------VQ--QHLLDKVWP----------------------RLR 210 (591)
Q Consensus 189 -----------~~~---~~-~-------~----~--------~~--~~~l~~~~~----------------------~~~ 210 (591)
.+. .. . . + .. ....+.... .+.
T Consensus 96 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 175 (273)
T PRK00192 96 ELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLK 175 (273)
T ss_pred EcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCE
Confidence 000 00 0 0 0 00 000000000 001
Q ss_pred E-----EEecC-hhhHHHHHHHHHHhhcCCCC-cEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHH----hcc-cccc-
Q psy8116 211 V-----LARSS-PTDKYTLVKGIIDSKVSDSR-EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK----EAS-DIIL- 277 (591)
Q Consensus 211 v-----~~r~s-p~~K~~~v~~l~~~~~~~~~-~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak----~aa-d~vl- 277 (591)
+ +.... +.+|+..++.+++++ +... +.++++||+.||++|++.|++|+||+ |+.+.+| .+| +.+.
T Consensus 176 ~~~~~~~~ei~~~~~Kg~al~~l~~~~-~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~ 253 (273)
T PRK00192 176 VTRGGRFLHLLGGGDKGKAVRWLKELY-RRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFIL 253 (273)
T ss_pred EEECCeEEEEeCCCCHHHHHHHHHHHH-hccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEE
Confidence 0 11111 128999999998874 5555 77778899999999999999999999 6676667 666 6766
Q ss_pred -cCCChhHHHHHHHH
Q psy8116 278 -TDDNFSSIVKAVMW 291 (591)
Q Consensus 278 -~~~~~~~i~~~i~~ 291 (591)
..++-+++.++|.+
T Consensus 254 ~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 254 ASAPGPEGWAEAINK 268 (273)
T ss_pred ecCCCcHHHHHHHHH
Confidence 56678899888863
No 53
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.13 E-value=1.6e-10 Score=119.27 Aligned_cols=134 Identities=21% Similarity=0.292 Sum_probs=99.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+..--.+.+ +.+|.- . + .
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l-t-------g--------------~ 238 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL-T-------G--------------N 238 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE-E-------e--------------E
Confidence 689999999999999999999999999888899999999832101111 111100 0 0 0
Q ss_pred EEE-ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 211 VLA-RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 211 v~~-r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
+.. -...+.|.+.++.+++++ +...+.+.++|||.||++|++.||+|+|| ++.+..++.||.++...+.+++..++
T Consensus 239 v~g~iv~~k~K~~~L~~la~~l-gi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 239 VLGDIVDAQYKADTLTRLAQEY-EIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ecCccCCcccHHHHHHHHHHHc-CCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 000 023468999999998874 44555566669999999999999999999 46777799999999988898887655
Q ss_pred H
Q psy8116 290 M 290 (591)
Q Consensus 290 ~ 290 (591)
-
T Consensus 316 ~ 316 (322)
T PRK11133 316 S 316 (322)
T ss_pred c
Confidence 3
No 54
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.06 E-value=7e-10 Score=103.77 Aligned_cols=107 Identities=20% Similarity=0.184 Sum_probs=84.4
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecCh
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSP 217 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp 217 (591)
-.+|+.|+++|+++.++|+.+...+..+.+.+|+.. .+ ...
T Consensus 40 ~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---~f----------------------------------~~~-- 80 (169)
T TIGR02726 40 GMGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---FH----------------------------------EGI-- 80 (169)
T ss_pred HHHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---EE----------------------------------ecC--
Confidence 468999999999999999999999999999999931 10 000
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i 285 (591)
..|...++.++++ ++...+.++++||+.||.+|++.|++++||+ ++.+.+|.+|++|+..++-++.
T Consensus 81 kpkp~~~~~~~~~-l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 81 KKKTEPYAQMLEE-MNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred CCCHHHHHHHHHH-cCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 2344566666665 4556677888899999999999999999999 6777889999999876555443
No 55
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.04 E-value=1.6e-09 Score=108.67 Aligned_cols=159 Identities=11% Similarity=0.144 Sum_probs=104.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH---------------------
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR--------------------- 188 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~--------------------- 188 (591)
..++.|++.+++++++++|++++++|||....++.+.+++++..++ .+++-+|..+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3457789999999999999999999999999999999999986542 344445542210
Q ss_pred ----hhhcccc--------------------hhh---HHHHhhhc----CcceEE-E-----ecCh--hhHHHHHHHHHH
Q psy8116 189 ----RVRDANG--------------------DVQ---QHLLDKVW----PRLRVL-A-----RSSP--TDKYTLVKGIID 229 (591)
Q Consensus 189 ----~~~~~~~--------------------~~~---~~~l~~~~----~~~~v~-~-----r~sp--~~K~~~v~~l~~ 229 (591)
....... +.. ...+.... ....+. + ...| .+|+..++.+++
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~ 177 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQ 177 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHH
Confidence 0000000 000 00011111 111111 1 2233 499999999998
Q ss_pred hhcCCCCcEEEEECCCCCCHHhhhc-CCeeeeeCCCccHHHHhccc-------ccccCCChhHHHHHHHH
Q psy8116 230 SKVSDSREVVAVTGDGTNDGPALKK-ADVGFAMGIAGTDVAKEASD-------IILTDDNFSSIVKAVMW 291 (591)
Q Consensus 230 ~~~~~~~~~va~iGDg~ND~~mLk~-A~vGiamg~~~~~~ak~aad-------~vl~~~~~~~i~~~i~~ 291 (591)
.+ +...+.++++||+.||.+|++. ++.|+||+ ++.+..|+.++ ++.....-+++.+++.+
T Consensus 178 ~~-~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 178 KL-AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred Hc-CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 84 5555666777999999999998 67999999 56666565443 66666677888888874
No 56
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.99 E-value=2.7e-09 Score=103.77 Aligned_cols=124 Identities=20% Similarity=0.220 Sum_probs=89.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.++++|.+|+++||-...-+..+++++|+...-.+.+...+..+. -.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt---------------------G~ 134 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT---------------------GR 134 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe---------------------ce
Confidence 789999999999999999999999999999999999999995432222211110110 01
Q ss_pred EE-EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccccccc
Q psy8116 211 VL-ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 278 (591)
Q Consensus 211 v~-~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~ 278 (591)
+. -.+..+.|...++.+.+.......+.++ +|||.||.|||+.||.++|+. +.+..+..|+....
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 22 2345578999998888774444444554 599999999999999999997 34444556655444
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.98 E-value=3.4e-09 Score=98.08 Aligned_cols=110 Identities=20% Similarity=0.300 Sum_probs=86.5
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhh
Q psy8116 140 AIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTD 219 (591)
Q Consensus 140 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~ 219 (591)
+|+.|++.|+++.++||++...+..+++++|+.. + +.+ ...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~----~--~~~---------------------------------~~~ 76 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH----L--YQG---------------------------------QSN 76 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----E--Eec---------------------------------ccc
Confidence 8999999999999999999999999999999831 1 111 134
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhH-HHHHHH
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSS-IVKAVM 290 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~-i~~~i~ 290 (591)
|...++.++++ +....+.++++||+.||.+|++.|+++++|. ++.+..+..||+++..+.-++ +.++++
T Consensus 77 k~~~~~~~~~~-~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 77 KLIAFSDILEK-LALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred hHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 66777777766 4556677888899999999999999999999 566778999999998665444 444443
No 58
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.96 E-value=2.4e-09 Score=105.04 Aligned_cols=133 Identities=19% Similarity=0.249 Sum_probs=97.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+..--...+..++..+.. .+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~---------------------~~ 143 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTG---------------------LV 143 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEE---------------------Ee
Confidence 689999999999999999999999999999999999999843111111111100000 00
Q ss_pred EEe-cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHH
Q psy8116 212 LAR-SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r-~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~ 288 (591)
... ..+..|..+++.+++. ++...+.+.++||+.||++|++.||++++++ +.+..+++||+++.++++..+..+
T Consensus 144 ~~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 144 EGPIVDASYKGKTLLILLRK-EGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cCcccCCcccHHHHHHHHHH-cCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 001 1234578888887776 3444556777899999999999999999986 567788999999999998887654
No 59
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.95 E-value=4.5e-09 Score=101.70 Aligned_cols=130 Identities=12% Similarity=0.044 Sum_probs=91.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecc-hhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEG-KEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.|+.+++.| ++.++||.....+..+++++|+..--.+-+..++ ..+. ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t-------------------G~-- 125 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV-------------------GY-- 125 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE-------------------Ce--
Confidence 68999999999999975 9999999999999999999999421111111111 0000 00
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
. ...+..|...++.+.+ .+..+.++|||.||++|++.||+|+++. +.+.+ +++||=.-.-.+.+.+..++.
T Consensus 126 ~--~~~~~~K~~~l~~l~~-----~~~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~-~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 126 Q--LRQKDPKRQSVIAFKS-----LYYRVIAAGDSYNDTTMLSEAHAGILFH-APENV-IREFPQFPAVHTYEDLKREFL 196 (203)
T ss_pred e--ecCcchHHHHHHHHHh-----hCCCEEEEeCCHHHHHHHHhCCCCEEec-CCHHH-HHhCCCCCcccCHHHHHHHHH
Confidence 0 1346789999988633 2335777799999999999999999998 44445 445544444447888888777
Q ss_pred HH
Q psy8116 291 WG 292 (591)
Q Consensus 291 ~g 292 (591)
+.
T Consensus 197 ~~ 198 (203)
T TIGR02137 197 KA 198 (203)
T ss_pred HH
Confidence 53
No 60
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.91 E-value=4.9e-09 Score=93.47 Aligned_cols=122 Identities=20% Similarity=0.337 Sum_probs=98.4
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChh
Q psy8116 139 DAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPT 218 (591)
Q Consensus 139 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~ 218 (591)
-.|+.+.++||++.++|||+...+..-|+++||.. ...| -.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG---------------------------------~~ 82 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG---------------------------------IS 82 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec---------------------------------hH
Confidence 47899999999999999999999999999999932 1112 35
Q ss_pred hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC----hhHHHHHHHHHHH
Q psy8116 219 DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN----FSSIVKAVMWGRN 294 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~----~~~i~~~i~~gR~ 294 (591)
+|....+.+++. ++...+.|+++||..||.|++++.+.++|+. ++.+..++.||+|+.... ...+.++|+.++.
T Consensus 83 dK~~a~~~L~~~-~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~ 160 (170)
T COG1778 83 DKLAAFEELLKK-LNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQG 160 (170)
T ss_pred hHHHHHHHHHHH-hCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccC
Confidence 788888888877 5777788889999999999999999999999 667777999999997544 4556667777776
Q ss_pred HHHHHHH
Q psy8116 295 VYDSIAK 301 (591)
Q Consensus 295 ~~~~i~~ 301 (591)
.++...+
T Consensus 161 ~~d~~~~ 167 (170)
T COG1778 161 KLDEALG 167 (170)
T ss_pred cHHHHHh
Confidence 6655443
No 61
>PLN02382 probable sucrose-phosphatase
Probab=98.86 E-value=1.9e-08 Score=107.60 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=98.0
Q ss_pred CCCchHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHH------------hh---------
Q psy8116 133 VRPEVPDAI-RKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNR------------RV--------- 190 (591)
Q Consensus 133 lr~~v~~~I-~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~------------~~--------- 190 (591)
+.+...+++ +++++.|+.++++|||....+..+.++.++..|+ ..++-+|.++.. .+
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 444455555 8899999999999999999999999999987653 333334432210 00
Q ss_pred ----hcccc--------------------hhhHH---HHhhhc----CcceE------EEecCh--hhHHHHHHHHHHhh
Q psy8116 191 ----RDANG--------------------DVQQH---LLDKVW----PRLRV------LARSSP--TDKYTLVKGIIDSK 231 (591)
Q Consensus 191 ----~~~~~--------------------~~~~~---~l~~~~----~~~~v------~~r~sp--~~K~~~v~~l~~~~ 231 (591)
..... +.... .+.+.. ..+.+ +....| .+|+.+++.|++++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 00000 00001 111111 01111 122333 38999999999984
Q ss_pred c--CCCCcEEEEECCCCCCHHhhhcCC-eeeeeCCCccHHHHhcc--------cccc-cCCChhHHHHHHHH
Q psy8116 232 V--SDSREVVAVTGDGTNDGPALKKAD-VGFAMGIAGTDVAKEAS--------DIIL-TDDNFSSIVKAVMW 291 (591)
Q Consensus 232 ~--~~~~~~va~iGDg~ND~~mLk~A~-vGiamg~~~~~~ak~aa--------d~vl-~~~~~~~i~~~i~~ 291 (591)
. +...+.++++||+.||.+||+.|+ +||||+ |+.+..|+.+ +++. .+.+-+++.++|.+
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 1 344556666799999999999999 799999 5666666543 3332 34567788887764
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.86 E-value=1.1e-08 Score=97.54 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=88.6
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecCh
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSP 217 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp 217 (591)
..+|+.|+++|+++.++||++...+..+++++|+.. + .. ..
T Consensus 54 ~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~----~--f~---------------------------------g~ 94 (183)
T PRK09484 54 GYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH----L--YQ---------------------------------GQ 94 (183)
T ss_pred hHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce----e--ec---------------------------------CC
Confidence 368999999999999999999999999999999832 1 01 12
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccccccCCC----hhHHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN----FSSIVKAVMW 291 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~vl~~~~----~~~i~~~i~~ 291 (591)
++|...++.+++. ++...+.++++||+.||++|++.|+++++++ ++.+..+..||+++..+. ...+.+.+..
T Consensus 95 ~~k~~~l~~~~~~-~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 95 SNKLIAFSDLLEK-LAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred CcHHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 3467788887776 4556677888899999999999999999987 677788889999986433 3445555543
No 63
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.84 E-value=1.6e-08 Score=99.40 Aligned_cols=126 Identities=17% Similarity=0.204 Sum_probs=82.5
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh-----h-----h--cccch----
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR-----V-----R--DANGD---- 196 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~-----~-----~--~~~~~---- 196 (591)
..+.+.++|++++++|++++++|||+...+..+.+.+|+.. .++++.||..+... . . ....+
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGAAIHLEELWREEPGYPRIILGISYGIIRL 94 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCcEEEcCcccccCCCceEEecCCCHHHHHH
Confidence 44458999999999999999999999999999999999841 35666666533210 0 0 00000
Q ss_pred hhHH--------------------------------HHh---------------------hhcC--cceE-----EEecC
Q psy8116 197 VQQH--------------------------------LLD---------------------KVWP--RLRV-----LARSS 216 (591)
Q Consensus 197 ~~~~--------------------------------~l~---------------------~~~~--~~~v-----~~r~s 216 (591)
..+. ... +... .+.+ +....
T Consensus 95 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~ 174 (221)
T TIGR02463 95 VLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTALLADLGLAIVQGNRFSHVL 174 (221)
T ss_pred HHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHHHHHcCCeEEecCCeeEEe
Confidence 0000 000 0000 0110 11111
Q ss_pred --hhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee
Q psy8116 217 --PTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM 261 (591)
Q Consensus 217 --p~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam 261 (591)
..+|+..++.+++++ +...+.|+++||+.||.+||+.|++|||+
T Consensus 175 ~~~~~Kg~al~~l~~~l-gi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 175 GASSSKGKAANWLKATY-NQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred cCCCCHHHHHHHHHHHh-CCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 138999999999984 55566677779999999999999999996
No 64
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.79 E-value=2.7e-08 Score=98.06 Aligned_cols=43 Identities=9% Similarity=0.128 Sum_probs=39.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
.+...+++.++|++++++|++++++|||....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556778999999999999999999999999999999999984
No 65
>PF12424 ATP_Ca_trans_C: Plasma membrane calcium transporter ATPase C terminal; InterPro: IPR022141 This domain family is found in eukaryotes, and is approximately 60 amino acids in length. The family is found in association with PF00689 from PFAM, PF00122 from PFAM, PF00702 from PFAM, PF00690 from PFAM. There is a conserved QTQ sequence motif. This family is the C-terminal of a calcium transporting ATPase located in the plasma membrane. ; GO: 0005388 calcium-transporting ATPase activity; PDB: 2KNE_B 1CFF_B.
Probab=98.78 E-value=8.7e-10 Score=84.86 Aligned_cols=35 Identities=46% Similarity=0.596 Sum_probs=15.7
Q ss_pred cchhhhhhhccccccceeeeeCCchhhHHHHhhcc
Q psy8116 550 GQILWIRGLTRLQTQVSQPVVDPHLQLCYEVKRRE 584 (591)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (591)
||+||+||+|||||||||||.|.-+.-.++..|+.
T Consensus 1 gq~lw~rgl~r~QtQIrVV~AFrs~l~~~~~~~~~ 35 (66)
T PF12424_consen 1 GQILWFRGLNRIQTQIRVVNAFRSSLSRYEGLRRP 35 (66)
T ss_dssp TCCCHHHHHHHHHHCH-------------------
T ss_pred CCEEEEeCCCccHhHHHHHHHHcCCcccCCccccC
Confidence 89999999999999999999887764334444443
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.70 E-value=6.4e-08 Score=93.30 Aligned_cols=121 Identities=21% Similarity=0.282 Sum_probs=85.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+..--...+..+.. +. ..+. .
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~----------g~--------~~p~--~ 139 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEK----------GF--------IQPD--G 139 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCC----------Ce--------Eecc--e
Confidence 68999999999999999999999999999999999999973210011111100 00 0011 1
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 274 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad 274 (591)
+....|..|..+++.+++. +....+.+.++||+.||++|++.||++++++ .+....+.|+|
T Consensus 140 ~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 140 IVRVTFDNKGEAVERLKRE-LNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred eeEEccccHHHHHHHHHHH-hCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 1223466788888887766 3444556778899999999999999999997 34444555555
No 67
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.65 E-value=1.6e-07 Score=93.92 Aligned_cols=52 Identities=10% Similarity=0.102 Sum_probs=44.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchh
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKE 185 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~ 185 (591)
+...+.+.++|++|+++||.|+++||+.......+.+++|+. +.+|+.||..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~---~p~I~eNGA~ 68 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE---HPFICEDGSA 68 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC---CeEEEeCCcE
Confidence 446778999999999999999999999999999999999984 3566666653
No 68
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.63 E-value=1.1e-07 Score=104.93 Aligned_cols=41 Identities=12% Similarity=0.149 Sum_probs=37.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
.+.+.+.++|++++++|++++++|||....+..+++++|+.
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 35578899999999999999999999999999999999973
No 69
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.62 E-value=1.9e-07 Score=94.46 Aligned_cols=151 Identities=12% Similarity=0.229 Sum_probs=91.4
Q ss_pred CCCCchHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCCC--CCCCceEE-ecch------------hhHHhhhc---
Q psy8116 132 PVRPEVPDAIRKCQR-AGITVRMVTGDNINTARSIATKCGIL--KPGDDFLI-LEGK------------EFNRRVRD--- 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~-aGI~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~i~-l~g~------------~~~~~~~~--- 192 (591)
.+.+++.++|++|++ .|++|+++|||+...+..+...+++. ..++..+. .+|. .+...+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 567899999999998 79999999999999999888766631 11111111 0110 00000000
Q ss_pred ---------c-------------cchhhHHHHhh---hcCcceE-----EEecCh--hhHHHHHHHHHHhhcCCCCcEEE
Q psy8116 193 ---------A-------------NGDVQQHLLDK---VWPRLRV-----LARSSP--TDKYTLVKGIIDSKVSDSREVVA 240 (591)
Q Consensus 193 ---------~-------------~~~~~~~~l~~---~~~~~~v-----~~r~sp--~~K~~~v~~l~~~~~~~~~~~va 240 (591)
+ ..+...+.... ......+ +....| .+|+..++.+++++ ....+.++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~-~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEA-PFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhc-CCCCCeEE
Confidence 0 00000111111 1111111 112223 49999999999874 44456677
Q ss_pred EECCCCCCHHhhhcC----CeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 241 VTGDGTNDGPALKKA----DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 241 ~iGDg~ND~~mLk~A----~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
++||+.||.+||+.+ ++||+||++. ..|++.+. +.+.+...+.
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCC--CHHHHHHHHH
Confidence 779999999999999 9999999542 44677776 5565654443
No 70
>PRK08238 hypothetical protein; Validated
Probab=98.60 E-value=1.5e-05 Score=86.89 Aligned_cols=99 Identities=21% Similarity=0.322 Sum_probs=73.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
|++|++.+.+++++++|++++++|+.+...+..+++.+|+. +..+.-++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF---d~Vigsd~~--------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF---DGVFASDGT--------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CEEEeCCCc---------------------------
Confidence 47899999999999999999999999999999999999983 222222211
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV 268 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ 268 (591)
.+..|+.|...++. . +.+ +.+.++||+.||.+|++.|+.+++++ .+...
T Consensus 122 -~~~kg~~K~~~l~~---~-l~~--~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 122 -TNLKGAAKAAALVE---A-FGE--RGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred -cccCCchHHHHHHH---H-hCc--cCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 02346667665543 2 332 22456699999999999999999998 34433
No 71
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.51 E-value=7.7e-07 Score=86.19 Aligned_cols=126 Identities=17% Similarity=0.171 Sum_probs=87.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++ +++.++||.....+..+..++|+...-...+...+.. .+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------------------------~i 122 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG------------------------MI 122 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC------------------------eE
Confidence 4689999999999999 9999999999999999999999842111111111110 00
Q ss_pred EE--ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhcccc-cccCCChhHHHHH
Q psy8116 212 LA--RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI-ILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~--r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad~-vl~~~~~~~i~~~ 288 (591)
.. ...|..|...++.+. ..+..+.++|||.||.+|.+.|++|++.+. ..+.....++. ++. ++..+.+.
T Consensus 123 ~~~~~~~p~~k~~~l~~~~-----~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~-~~~~~~~~~~~~~~~--~~~el~~~ 194 (205)
T PRK13582 123 TGYDLRQPDGKRQAVKALK-----SLGYRVIAAGDSYNDTTMLGEADAGILFRP-PANVIAEFPQFPAVH--TYDELLAA 194 (205)
T ss_pred ECccccccchHHHHHHHHH-----HhCCeEEEEeCCHHHHHHHHhCCCCEEECC-CHHHHHhCCcccccC--CHHHHHHH
Confidence 00 123667877777642 335678888999999999999999998873 44444455665 444 67777666
Q ss_pred HH
Q psy8116 289 VM 290 (591)
Q Consensus 289 i~ 290 (591)
+.
T Consensus 195 l~ 196 (205)
T PRK13582 195 ID 196 (205)
T ss_pred HH
Confidence 55
No 72
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.49 E-value=9.4e-08 Score=79.99 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=36.1
Q ss_pred ccCCcceeeccCCcccceeeeEEeeCCCCcEEEEE---echhhhhcccc
Q psy8116 7 EENADPGLHFQLSAARALMKVTVIPRKGGGYRSLP---TKVLPRSCAFI 52 (591)
Q Consensus 7 ~~~~~~v~~fpF~s~rk~msv~v~~~~~~~~~~~~---~e~il~~c~~~ 52 (591)
..++.++.++||||+||||+ ||++ .++.+.+|+ ||.||++|+++
T Consensus 45 ~~~~~~~~~~pF~S~rK~ms-vv~~-~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 45 RSKYKIVAEIPFDSERKRMS-VVVR-NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred HhhcceeEEEccCcccceeE-EEEe-CCCEEEEEcCCChHHHHHhcCCC
Confidence 45788999999999999999 6665 334577788 99999999864
No 73
>PTZ00174 phosphomannomutase; Provisional
Probab=98.39 E-value=1.6e-06 Score=86.83 Aligned_cols=54 Identities=20% Similarity=0.285 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECC----CCCCHHhhhcC-CeeeeeCCCccHHHHhcccccc
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGD----GTNDGPALKKA-DVGFAMGIAGTDVAKEASDIIL 277 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGD----g~ND~~mLk~A-~vGiamg~~~~~~ak~aad~vl 277 (591)
.+|+..++.++++ .+.|+++|| |.||++||+.| -.|++++ ++.+..|..+.+.+
T Consensus 187 vsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4999999998775 355666699 99999999976 4566667 67888788776554
No 74
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.37 E-value=9.9e-07 Score=85.44 Aligned_cols=129 Identities=18% Similarity=0.358 Sum_probs=80.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC--CCCCCCceEEecchhh--------HHhh---hc------
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCG--ILKPGDDFLILEGKEF--------NRRV---RD------ 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g--i~~~~~~~i~l~g~~~--------~~~~---~~------ 192 (591)
++.+++.++|++|++.|++++++|||....+..+.+.++ ++..++..+...+... ...+ ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 578999999999999999999999999999999988743 2222222221111100 0000 00
Q ss_pred -ccc-------------------h--hh----HH---HHhhhc---CcceEEE------ecCh--hhHHHHHHHHHHhhc
Q psy8116 193 -ANG-------------------D--VQ----QH---LLDKVW---PRLRVLA------RSSP--TDKYTLVKGIIDSKV 232 (591)
Q Consensus 193 -~~~-------------------~--~~----~~---~l~~~~---~~~~v~~------r~sp--~~K~~~v~~l~~~~~ 232 (591)
... . .. .. .+.... ..+.+.. ...| .+|+..++.+++++
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~- 175 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKEL- 175 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHh-
Confidence 000 0 00 00 011111 1122221 2223 59999999999874
Q ss_pred CCCCcEEEEECCCCCCHHhhhcCCeeeee
Q psy8116 233 SDSREVVAVTGDGTNDGPALKKADVGFAM 261 (591)
Q Consensus 233 ~~~~~~va~iGDg~ND~~mLk~A~vGiam 261 (591)
....+.++++||+.||.+|++.+++||||
T Consensus 176 ~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 176 NGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 44556677789999999999999999997
No 75
>KOG1615|consensus
Probab=98.36 E-value=1.1e-06 Score=81.34 Aligned_cols=112 Identities=19% Similarity=0.270 Sum_probs=78.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
.+.|++++..+.|++.|.+|.++||--...+..+|.++||...+-+.- .+..+..++..- ++ ...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN--------~l~fd~~Gk~~g--fd----~~~- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYAN--------ELLFDKDGKYLG--FD----TNE- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhh--------eeeeccCCcccc--cc----cCC-
Confidence 478999999999999999999999999999999999999964321110 001111111000 00 000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
.-+....|+++++.+++ ..+...++|+|||.||.+|+..|+.=++.|
T Consensus 153 -ptsdsggKa~~i~~lrk---~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 -PTSDSGGKAEVIALLRK---NYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred -ccccCCccHHHHHHHHh---CCChheeEEecCCccccccCCchhhhhccC
Confidence 01223489999998876 457789999999999999999987656554
No 76
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.34 E-value=1.1e-06 Score=87.79 Aligned_cols=73 Identities=16% Similarity=0.233 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHH----HHhccc----ccccCCChhHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDV----AKEASD----IILTDDNFSSIVKAV 289 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~----ak~aad----~vl~~~~~~~i~~~i 289 (591)
.+|+.+++.++++......++++ +||+.||.+||..++.||.+||+..+. .....+ +....+.-.+|.+++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~-aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLV-AGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEE-EESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEE-EeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 49999999999985334444544 599999999999999999999665551 222221 344555677788877
Q ss_pred HH
Q psy8116 290 MW 291 (591)
Q Consensus 290 ~~ 291 (591)
.|
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 77
>PLN02954 phosphoserine phosphatase
Probab=98.29 E-value=7.7e-06 Score=80.38 Aligned_cols=132 Identities=20% Similarity=0.300 Sum_probs=85.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE----EecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL----ILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i----~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.. ..+. ..+.... +... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~--~~~~~~~~~~~~~g~---~~g~-------------~ 145 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPP--ENIFANQILFGDSGE---YAGF-------------D 145 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCCh--hhEEEeEEEEcCCCc---EECc-------------c
Confidence 478999999999999999999999999999999999999942 1111 1110000 0000 0
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhc--CCeeeeeCCCc-cHHHHhcccccccCCChhH
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKK--ADVGFAMGIAG-TDVAKEASDIILTDDNFSS 284 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~--A~vGiamg~~~-~~~ak~aad~vl~~~~~~~ 284 (591)
.... ......|...++.+++.. + .+.++++||+.||+.|.+. ++++++.|... .+.....+|+++. ++..
T Consensus 146 ~~~~--~~~~~~K~~~i~~~~~~~-~--~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~e 218 (224)
T PLN02954 146 ENEP--TSRSGGKAEAVQHIKKKH-G--YKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQD 218 (224)
T ss_pred CCCc--ccCCccHHHHHHHHHHHc-C--CCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHH
Confidence 0000 012345888888876652 2 2467778999999999888 45666655322 2334556888886 6666
Q ss_pred HHHH
Q psy8116 285 IVKA 288 (591)
Q Consensus 285 i~~~ 288 (591)
+.+.
T Consensus 219 l~~~ 222 (224)
T PLN02954 219 LIEV 222 (224)
T ss_pred HHHh
Confidence 6543
No 78
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.29 E-value=3.9e-06 Score=82.47 Aligned_cols=127 Identities=20% Similarity=0.326 Sum_probs=92.7
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecc-hhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEG-KEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g-~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
+..+-|++++++..|+++|++..++|+++...+..+.+..|+.. .+-.+-| ....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~---~F~~i~g~~~~~--------------------- 142 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD---YFDVIVGGDDVP--------------------- 142 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc---ccceEEcCCCCC---------------------
Confidence 56789999999999999999999999999999999999999943 3323322 1110
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC---eeeeeCCC-ccHHHHhcccccccCCChhH
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD---VGFAMGIA-GTDVAKEASDIILTDDNFSS 284 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~---vGiamg~~-~~~~ak~aad~vl~~~~~~~ 284 (591)
..+..|.....+++. +....+.++||||+.+|+.|-++|+ +|+..|.+ +.......+|+++. +...
T Consensus 143 ---~~KP~P~~l~~~~~~-----~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~e 212 (220)
T COG0546 143 ---PPKPDPEPLLLLLEK-----LGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAE 212 (220)
T ss_pred ---CCCcCHHHHHHHHHH-----hCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHH
Confidence 012334444444444 2333568999999999999999998 77888853 45566677999988 7777
Q ss_pred HHHHHH
Q psy8116 285 IVKAVM 290 (591)
Q Consensus 285 i~~~i~ 290 (591)
+...+.
T Consensus 213 l~~~l~ 218 (220)
T COG0546 213 LLALLA 218 (220)
T ss_pred HHHHHh
Confidence 765543
No 79
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.27 E-value=6.3e-06 Score=80.96 Aligned_cols=128 Identities=17% Similarity=0.271 Sum_probs=89.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.|++.|+++.++||.....+..+.+..|+...-+. ++.+...
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 145 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VIGGDSL------------------------ 145 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EEcCCCC------------------------
Confidence 56899999999999999999999999999999999999998432111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeee--CCC-ccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAM--GIA-GTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giam--g~~-~~~~ak~aad~vl~~~~~~~i~ 286 (591)
....| |..+++.+++. ++...+.++++||+.||+.+.+.||+ ++++ |.. ..+.....+++++. ++..+.
T Consensus 146 --~~~kp--~~~~~~~~~~~-~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~ 218 (226)
T PRK13222 146 --PNKKP--DPAPLLLACEK-LGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELL 218 (226)
T ss_pred --CCCCc--ChHHHHHHHHH-cCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHH
Confidence 01112 23455555555 45566778888999999999999997 4443 322 23444567888875 888888
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
..+.+
T Consensus 219 ~~l~~ 223 (226)
T PRK13222 219 PLLGL 223 (226)
T ss_pred HHHHH
Confidence 77654
No 80
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.27 E-value=7.3e-06 Score=80.14 Aligned_cols=135 Identities=14% Similarity=0.111 Sum_probs=84.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE----EecchhhHHhhhcccchhhHHHHhhhc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL----ILEGKEFNRRVRDANGDVQQHLLDKVW 206 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i----~l~g~~~~~~~~~~~~~~~~~~l~~~~ 206 (591)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.. ..+. ..+|..+... .-.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~~~~~~~~~~--------------~p~ 131 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEADFSNEYIHID--------------WPH 131 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeEeeCCeeEEe--------------CCC
Confidence 479999999999999999999999999999999998887542 2221 1222211000 000
Q ss_pred CcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccH--HHHhcccccccCCChhH
Q psy8116 207 PRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTD--VAKEASDIILTDDNFSS 284 (591)
Q Consensus 207 ~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~--~ak~aad~vl~~~~~~~ 284 (591)
+....+.......|..+++.+. ...+.+.++|||.||.+|++.||+++|=+ .-.+ .....+.... ++|..
T Consensus 132 ~~~~~~~~~cg~~K~~~l~~~~-----~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~d 203 (214)
T TIGR03333 132 PCDGTCQNQCGCCKPSLIRKLS-----EPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYD 203 (214)
T ss_pred CCccccccCCCCCHHHHHHHHh-----hcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHH
Confidence 0000000111346888888753 23456788899999999999999988744 1111 1111232333 37888
Q ss_pred HHHHHH
Q psy8116 285 IVKAVM 290 (591)
Q Consensus 285 i~~~i~ 290 (591)
+.+.+.
T Consensus 204 i~~~l~ 209 (214)
T TIGR03333 204 VRKELE 209 (214)
T ss_pred HHHHHH
Confidence 877765
No 81
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.26 E-value=2.8e-06 Score=82.01 Aligned_cols=112 Identities=19% Similarity=0.187 Sum_probs=79.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEe-cchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLIL-EGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l-~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
..++.|++.+.|+.+++.|++++++||.....+..+++.+|+..--..-+.. ++..+ .++
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~-------~g~------------ 145 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIY-------TGN------------ 145 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEE-------eCC------------
Confidence 4578999999999999999999999999999999999999984210000111 00000 000
Q ss_pred ceEE-EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCC
Q psy8116 209 LRVL-ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI 263 (591)
Q Consensus 209 ~~v~-~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~ 263 (591)
+. ..+.++.|...++.+++.. ....+.+.++||+.+|.+|++.|+.++++..
T Consensus 146 --~~~~~~~g~~K~~~l~~~~~~~-~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 146 --IDGNNCKGEGKVHALAELLAEE-QIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred --ccCCCCCChHHHHHHHHHHHHc-CCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 00 1234578888888876652 3344566777999999999999999998873
No 82
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.20 E-value=1e-05 Score=78.44 Aligned_cols=126 Identities=20% Similarity=0.285 Sum_probs=86.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|+++|+++.++||.....+....+..|+...-+.. +...+.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i--~~~~~~------------------------ 127 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHV--IGSDEV------------------------ 127 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeE--EecCcC------------------------
Confidence 368899999999999999999999999999999999999984211111 111000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee---eeCC-CccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF---AMGI-AGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi---amg~-~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
..+..|..+++.+++. ++...+.++++||+.+|+.+-++||+.+ .-|. ...+..+..+|+++. ++..+.
T Consensus 128 ----~~~KP~~~~~~~~~~~-~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~ 200 (205)
T TIGR01454 128 ----PRPKPAPDIVREALRL-LDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLL 200 (205)
T ss_pred ----CCCCCChHHHHHHHHH-cCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHH
Confidence 0122234455555554 4555677888899999999999999753 3342 223345677898876 677666
Q ss_pred HHH
Q psy8116 287 KAV 289 (591)
Q Consensus 287 ~~i 289 (591)
.++
T Consensus 201 ~~~ 203 (205)
T TIGR01454 201 ALC 203 (205)
T ss_pred HHh
Confidence 544
No 83
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.20 E-value=1.5e-05 Score=92.09 Aligned_cols=149 Identities=17% Similarity=0.265 Sum_probs=90.3
Q ss_pred CCCCchHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCC--CCCCCceEEecchhh--------------HHhhhc--
Q psy8116 132 PVRPEVPDAIRKCQR-AGITVRMVTGDNINTARSIATKCGI--LKPGDDFLILEGKEF--------------NRRVRD-- 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~-aGI~v~~~TGd~~~ta~~ia~~~gi--~~~~~~~i~l~g~~~--------------~~~~~~-- 192 (591)
.+.+++.++|++|.+ .|+.|+++|||............++ ...++..+...|.+. ...+..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 6999999999999999887665442 222222221111110 000000
Q ss_pred --ccc-------------------hh-------hHHHHhhhcC--cceEE-------EecChhhHHHHHHHHHHhhcCCC
Q psy8116 193 --ANG-------------------DV-------QQHLLDKVWP--RLRVL-------ARSSPTDKYTLVKGIIDSKVSDS 235 (591)
Q Consensus 193 --~~~-------------------~~-------~~~~l~~~~~--~~~v~-------~r~sp~~K~~~v~~l~~~~~~~~ 235 (591)
..+ +. ....+..... .+.+. .+....+|+.+++.+++. ..
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~---~~ 670 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA---GP 670 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc---CC
Confidence 000 00 0011111111 11111 223335999999999873 34
Q ss_pred CcEEEEECCCCCCHHhhhcC---CeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 236 REVVAVTGDGTNDGPALKKA---DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 236 ~~~va~iGDg~ND~~mLk~A---~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+.++++||+.||.+||+.+ +++++||+ + +.+|++.+.+ -+++...+.
T Consensus 671 ~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-~----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 671 YDFVLAIGDDTTDEDMFRALPETAITVKVGP-G----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred CCEEEEECCCCChHHHHHhcccCceEEEECC-C----CCcceEeCCC--HHHHHHHHH
Confidence 56788889999999999986 68999994 2 5788898884 355655544
No 84
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.18 E-value=1.2e-05 Score=78.82 Aligned_cols=132 Identities=18% Similarity=0.211 Sum_probs=82.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEE----ecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLI----LEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~----l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
+++|++.+.++.|++.|+++.++||.....+..+.+++ +.. ..+++ .+|..+.. ..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~----------------~kp 134 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITI----------------TWP 134 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEE----------------ecc
Confidence 68999999999999999999999999999999999988 632 22221 12211100 000
Q ss_pred cceE--EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCccHHHH--hcccccccCCChh
Q psy8116 208 RLRV--LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK--EASDIILTDDNFS 283 (591)
Q Consensus 208 ~~~v--~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak--~aad~vl~~~~~~ 283 (591)
.... +.......|..+++.+ +.....+.++|||.||++|.+.||+.+|-+ .-.+.++ ..+.+.+. +|.
T Consensus 135 ~p~~~~~~~~~~~~K~~~l~~~-----~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~~--~f~ 206 (219)
T PRK09552 135 HPCDEHCQNHCGCCKPSLIRKL-----SDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPFE--TFH 206 (219)
T ss_pred CCccccccccCCCchHHHHHHh-----ccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCccccC--CHH
Confidence 0000 0000012477777763 344556788899999999999999977732 1112211 22333333 788
Q ss_pred HHHHHHH
Q psy8116 284 SIVKAVM 290 (591)
Q Consensus 284 ~i~~~i~ 290 (591)
.+.+.+.
T Consensus 207 ei~~~l~ 213 (219)
T PRK09552 207 DVQTELK 213 (219)
T ss_pred HHHHHHH
Confidence 8777664
No 85
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.17 E-value=3.8e-06 Score=80.22 Aligned_cols=96 Identities=27% Similarity=0.297 Sum_probs=68.5
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEe
Q psy8116 135 PEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLAR 214 (591)
Q Consensus 135 ~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r 214 (591)
+++.+.|+.++++|++++++||.....+..+++.+|+.. ..+++.+. ..+ .......+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~--~~v~~~~~-~~~-------------------~~~~~~~~ 149 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD--DNVIGNEL-FDN-------------------GGGIFTGR 149 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE--GGEEEEEE-ECT-------------------TCCEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEEEEEee-eec-------------------ccceeeee
Confidence 677799999999999999999999999999999999942 22222211 100 01122334
Q ss_pred cChh---hHHHHHHHH--HHhhcCCCCcEEEEECCCCCCHHhhh
Q psy8116 215 SSPT---DKYTLVKGI--IDSKVSDSREVVAVTGDGTNDGPALK 253 (591)
Q Consensus 215 ~sp~---~K~~~v~~l--~~~~~~~~~~~va~iGDg~ND~~mLk 253 (591)
.++. .|...++.+ .... ......+.++|||.||.||||
T Consensus 150 ~~~~~~~~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 150 ITGSNCGGKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEEESHHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred ECCCCCCcHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 4433 499999987 1221 456778888899999999996
No 86
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.16 E-value=6.7e-06 Score=77.48 Aligned_cols=104 Identities=22% Similarity=0.254 Sum_probs=72.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecc-hhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEG-KEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
+++|++.+.++.+++.|++++++||.....+..++..+|+..--...+..+. ..+. ++ ...+
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~-------g~--------~~~~-- 135 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLT-------GP--------IEGQ-- 135 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEe-------Cc--------cCCc--
Confidence 3689999999999999999999999999999999999998421111111110 0000 00 0000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA 255 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A 255 (591)
....+..|...++.+++.. ....+.++++|||.||.+|++.|
T Consensus 136 --~~~~~~~K~~~l~~~~~~~-~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 --VNPEGECKGKVLKELLEES-KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred --ccCCcchHHHHHHHHHHHh-CCCHHHEEEEeCCHHHHHHHhcC
Confidence 1234678999999877653 34456677889999999999875
No 87
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.11 E-value=1.3e-05 Score=71.23 Aligned_cols=118 Identities=19% Similarity=0.171 Sum_probs=74.0
Q ss_pred eccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 128 GIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 128 ~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
.-..++.+++.+.+++|++.|++++++||+....+....+.+|+....+..+..++...... ..... ...
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~--------~~~ 89 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYP--KEGLF--------LGG 89 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcc--ccccc--------ccc
Confidence 44568999999999999999999999999999999999999998433333332222211100 00000 001
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC-eeee
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD-VGFA 260 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~-vGia 260 (591)
....+.+..+..+..+.+. +....+.+.++||+.+|+.|++.++ .+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 90 GPFDIGKPNPDKLLAALKL-----LGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred cccccCCCCHHHHHHHHHH-----cCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 1112223334334333333 4455677888899999999999843 4443
No 88
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.00 E-value=2.6e-05 Score=74.06 Aligned_cols=115 Identities=18% Similarity=0.161 Sum_probs=74.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+.. .+-.+-+.+.. .+.++ .+.....+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~---~f~~i~~~~~~---~~~~g-----~~~~~~~~~~ 139 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD---VFIEIYSNPAS---FDNDG-----RHIVWPHHCH 139 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh---heeEEeccCce---ECCCC-----cEEEecCCCC
Confidence 4799999999999999999999999999999999999999842 11111111110 00000 0000001111
Q ss_pred EEEe-cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 211 VLAR-SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 211 v~~r-~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
.+.. .....|..+++.+++.. .+.+.++|||.||++|.+.||+-+|
T Consensus 140 ~~~~~~~g~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 140 GCCSCPCGCCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred ccCcCCCCCCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCCcccc
Confidence 1111 12236888888865431 5678888999999999999988775
No 89
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.98 E-value=4e-05 Score=75.26 Aligned_cols=123 Identities=14% Similarity=0.174 Sum_probs=83.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|++.|+++.++||.....+..+.+..|+...-+. ++.+.+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------ 144 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--LASAEKL------------------------ 144 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE--EEEcccC------------------------
Confidence 46889999999999999999999999999999999999998432111 1111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCC---ccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIA---GTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~---~~~~ak~aad~vl~~~~~~~i~ 286 (591)
..+..+..+++.+++. ++...+.++++||+.||+.+.+.||+....-.. ..+.-...+|.++. ++..+.
T Consensus 145 ----~~~Kp~~~~~~~~~~~-~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 145 ----PYSKPHPEVYLNCAAK-LGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred ----CCCCCCHHHHHHHHHH-cCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 0112233456666666 455567788889999999999999976433212 22222345777776 666654
No 90
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.96 E-value=4.2e-05 Score=77.65 Aligned_cols=128 Identities=16% Similarity=0.229 Sum_probs=85.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
..++.|++.++++.|+++|+++.++||.+...+..+..+.|+...-+. +..+.+.
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~--i~~~d~~----------------------- 153 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW--IIGGDTL----------------------- 153 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE--EEecCCC-----------------------
Confidence 346889999999999999999999999999999988888888321111 1111100
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-ee--eCCC-ccHHHHhcccccccCCChhHH
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FA--MGIA-GTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-ia--mg~~-~~~~ak~aad~vl~~~~~~~i 285 (591)
.....+..+++.+++. ++...+.++++||+.||+.+.+.||+. ++ .|.. ..+..+..+|+++. ++..+
T Consensus 154 -----~~~Kp~p~~~~~~~~~-~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el 225 (272)
T PRK13223 154 -----PQKKPDPAALLFVMKM-AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRAL 225 (272)
T ss_pred -----CCCCCCcHHHHHHHHH-hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHH
Confidence 0012234455555555 355567777889999999999999963 33 3322 22334457888886 67666
Q ss_pred HHHHH
Q psy8116 286 VKAVM 290 (591)
Q Consensus 286 ~~~i~ 290 (591)
.+++.
T Consensus 226 ~~~~~ 230 (272)
T PRK13223 226 LPGCA 230 (272)
T ss_pred HHHHh
Confidence 65433
No 91
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.95 E-value=3.8e-05 Score=74.93 Aligned_cols=125 Identities=18% Similarity=0.189 Sum_probs=84.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++||.....+..+.+..|+.. .+-.+-+.+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~---~f~~i~~~~~------------------------- 133 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE---FFDVVITLDD------------------------- 133 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh---ceeEEEecCc-------------------------
Confidence 478999999999999999999999999999999999999842 2211111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee---eeeCCCccH-HHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG---FAMGIAGTD-VAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG---iamg~~~~~-~ak~aad~vl~~~~~~~i~~ 287 (591)
..+ +.-|...++.+++. ++...+.+++|||+.+|+.+-++||+- ++-|....+ .....+|+++. ++..+.+
T Consensus 134 ~~~--~Kp~p~~~~~~~~~-~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~ 208 (214)
T PRK13288 134 VEH--AKPDPEPVLKALEL-LGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLA 208 (214)
T ss_pred CCC--CCCCcHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHH
Confidence 001 11233344444444 455567788889999999999999974 434422222 33446888776 7777766
Q ss_pred HH
Q psy8116 288 AV 289 (591)
Q Consensus 288 ~i 289 (591)
.+
T Consensus 209 ~i 210 (214)
T PRK13288 209 IV 210 (214)
T ss_pred HH
Confidence 54
No 92
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.95 E-value=3.8e-05 Score=74.72 Aligned_cols=123 Identities=15% Similarity=0.190 Sum_probs=82.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+.....+..+.++.|+...-+. ++.+.+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 137 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV--LIGGDSL------------------------- 137 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE--EEecCCC-------------------------
Confidence 6899999999999999999999999999999999999998432111 1111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee-e--CCCc-cHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA-M--GIAG-TDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia-m--g~~~-~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.+ +..+..++..+++. ++...+.++++||+.+|+.+.++||+.+. + |... .+.....+|+++. ++..+..
T Consensus 138 -~~--~Kp~p~~~~~~~~~-~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 138 -AQ--RKPHPDPLLLAAER-LGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred -CC--CCCChHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 01 11223445555555 45556668888999999999999997543 3 3211 2233456888776 5655543
No 93
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.88 E-value=3.3e-05 Score=77.15 Aligned_cols=71 Identities=18% Similarity=0.186 Sum_probs=53.9
Q ss_pred ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC--------CeeeeeCCCccHHHHhcccccccCCChhHH
Q psy8116 214 RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA--------DVGFAMGIAGTDVAKEASDIILTDDNFSSI 285 (591)
Q Consensus 214 r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A--------~vGiamg~~~~~~ak~aad~vl~~~~~~~i 285 (591)
+..+.+|+..++.+++. +......++++||+.||.+|++.+ ++|++|+ .+ ..+..|++++. +.+.+
T Consensus 162 ~p~~~~Kg~a~~~~~~~-~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWH-QPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQV 235 (244)
T ss_pred eeCCCCHHHHHHHHHHh-cccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHH
Confidence 45566999999999887 444556788889999999999998 5788885 22 23567899887 66666
Q ss_pred HHHHH
Q psy8116 286 VKAVM 290 (591)
Q Consensus 286 ~~~i~ 290 (591)
.+.+.
T Consensus 236 ~~~L~ 240 (244)
T TIGR00685 236 LEFLG 240 (244)
T ss_pred HHHHH
Confidence 66553
No 94
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.86 E-value=8.1e-05 Score=73.54 Aligned_cols=127 Identities=16% Similarity=0.157 Sum_probs=84.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.+...+..+.++.|+...-+ .++.+.+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~------------------------- 147 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA--VLIGGDTL------------------------- 147 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc--EEEecCcC-------------------------
Confidence 688999999999999999999999999988888888888843111 11111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee---eeCCC-c-cHHHHhcccccccCCChhHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF---AMGIA-G-TDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi---amg~~-~-~~~ak~aad~vl~~~~~~~i~ 286 (591)
.+ ++.+..++..+++. ++...+.+++|||+.||+.+-+.||+.. .-|.. . .......+|+++. ++..+.
T Consensus 148 -~~--~KP~p~~~~~~~~~-l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~ 221 (229)
T PRK13226 148 -AE--RKPHPLPLLVAAER-IGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLW 221 (229)
T ss_pred -CC--CCCCHHHHHHHHHH-hCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHH
Confidence 00 11122344444444 4556677888899999999999999653 33321 1 1233456888887 777776
Q ss_pred HHHHH
Q psy8116 287 KAVMW 291 (591)
Q Consensus 287 ~~i~~ 291 (591)
+.+-|
T Consensus 222 ~~~~~ 226 (229)
T PRK13226 222 NPATW 226 (229)
T ss_pred HHhcC
Confidence 65543
No 95
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.84 E-value=0.00016 Score=73.39 Aligned_cols=121 Identities=16% Similarity=0.249 Sum_probs=84.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEE-ecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLI-LEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~-l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.. ++-. +.+.+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~---~F~~vi~~~~------------------------- 193 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS---LFSVVQAGTP------------------------- 193 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh---heEEEEecCC-------------------------
Confidence 678999999999999999999999999999999999999842 2111 11110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee---eeeCCCccH-HHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG---FAMGIAGTD-VAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG---iamg~~~~~-~ak~aad~vl~~~~~~~i~ 286 (591)
. ..|...+..++++ ++...+.+++|||+.+|+.+-++|++- +.-|....+ .....+|+++. ++..+.
T Consensus 194 -----~-~~k~~~~~~~l~~-~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~ 264 (273)
T PRK13225 194 -----I-LSKRRALSQLVAR-EGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLL 264 (273)
T ss_pred -----C-CCCHHHHHHHHHH-hCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHH
Confidence 0 0133455555555 344556788889999999999999964 333422222 33456888876 777777
Q ss_pred HHH
Q psy8116 287 KAV 289 (591)
Q Consensus 287 ~~i 289 (591)
+.+
T Consensus 265 ~~~ 267 (273)
T PRK13225 265 QAV 267 (273)
T ss_pred HHH
Confidence 654
No 96
>PLN02580 trehalose-phosphatase
Probab=97.79 E-value=6.7e-05 Score=78.78 Aligned_cols=68 Identities=16% Similarity=0.112 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHhhcCCCCc--EEEEECCCCCCHHhhhc-----CCeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDSRE--VVAVTGDGTNDGPALKK-----ADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~--~va~iGDg~ND~~mLk~-----A~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+|+..++.+++++.....+ .++++||+.||.+||+. +++||+||+ +... ..|++.+. +-+.+...+.
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn-~~~~--t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS-VPKE--SNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec-CCCC--ccceEEcC--CHHHHHHHHH
Confidence 49999999999874322222 24788999999999996 689999994 3332 36788877 6677766665
No 97
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.75 E-value=0.00045 Score=69.48 Aligned_cols=143 Identities=14% Similarity=0.190 Sum_probs=87.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-+++|++.+.++.|++.|+++.++||-....+..+.++.|+..+... +.-|--.++. ++... . .+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~-IvSN~L~f~~-----dGvlt-----G-~~~-- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK-VVSNFMDFDE-----DGVLK-----G-FKG-- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce-EEeeeEEECC-----CCeEe-----C-CCC--
Confidence 36899999999999999999999999999999999999998644322 2111111100 00000 0 000
Q ss_pred EEEecChhhHHHHHHH-HHHhhcC--CCCcEEEEECCCCCCHHhhhcCC---eeeeeC--CCcc----HHHHhccccccc
Q psy8116 211 VLARSSPTDKYTLVKG-IIDSKVS--DSREVVAVTGDGTNDGPALKKAD---VGFAMG--IAGT----DVAKEASDIILT 278 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~-l~~~~~~--~~~~~va~iGDg~ND~~mLk~A~---vGiamg--~~~~----~~ak~aad~vl~ 278 (591)
--....+|...+.. ..++ +. .....+.++|||.||++|..-.. .-+.+| +... +.-+++-|+|+.
T Consensus 186 --P~i~~~~K~~~v~~~~~~~-~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 186 --PLIHTFNKNHDVALRNTEY-FNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred --CcccccccHHHHHHHHHHH-hCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 00112467765553 3443 33 44556777799999999966541 112222 2222 234678899998
Q ss_pred CCChhHHHHHHH
Q psy8116 279 DDNFSSIVKAVM 290 (591)
Q Consensus 279 ~~~~~~i~~~i~ 290 (591)
+|.--.++.+|.
T Consensus 263 ~D~t~~v~~~il 274 (277)
T TIGR01544 263 QDETLEVANSIL 274 (277)
T ss_pred CCCCchHHHHHH
Confidence 877666665554
No 98
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.73 E-value=0.0002 Score=67.76 Aligned_cols=56 Identities=20% Similarity=0.191 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHhhcCCCCc-EEEEECCCCCCHHhhhcCCeeeeeCCCccHHHHhccc
Q psy8116 219 DKYTLVKGIIDSKVSDSRE-VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 274 (591)
Q Consensus 219 ~K~~~v~~l~~~~~~~~~~-~va~iGDg~ND~~mLk~A~vGiamg~~~~~~ak~aad 274 (591)
.|+++.+.+++.+.+..+. ++...|||.||+||+...|..+-+++-..+-+...++
T Consensus 191 gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV~~lnre~~~lv~~ 247 (274)
T COG3769 191 GKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIVKGLNREGVHLVSS 247 (274)
T ss_pred CccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheeecccchhhhhcccc
Confidence 5889999888765444443 4888899999999999999999998555555444443
No 99
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.71 E-value=0.00029 Score=65.29 Aligned_cols=110 Identities=20% Similarity=0.221 Sum_probs=75.5
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---CCCCCCCceEEecchhhHHhhhcccchhhHHHHh
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR---SIATKC---GILKPGDDFLILEGKEFNRRVRDANGDVQQHLLD 203 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~---~ia~~~---gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~ 203 (591)
+|.+.+++.+++++++++|++++++|||+...+. ....++ |..-+....+.-+|..+... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~-~------------ 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAAL-H------------ 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhh-h------------
Confidence 5788999999999999999999999999998884 555552 32122344454555433211 0
Q ss_pred hhcCcceEEEecChh-hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 204 KVWPRLRVLARSSPT-DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 204 ~~~~~~~v~~r~sp~-~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
. .+. ...|+ -|...++.+.+..-......++..||+.+|+.+.+++++.
T Consensus 92 ----~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 ----R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0 111 22343 4888888887754334567888889999999999988765
No 100
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.70 E-value=0.00025 Score=70.96 Aligned_cols=117 Identities=11% Similarity=0.051 Sum_probs=78.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|++.|+++.++|+.....+....+.+|+...-+. ++.+.+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--iv~~~~~~------------------------ 161 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA--VIIGSECE------------------------ 161 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE--EEecCcCC------------------------
Confidence 5789999999999999999999999999999999999998532121 12221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee---eeeCCCccHHHHhcccccccC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG---FAMGIAGTDVAKEASDIILTD 279 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG---iamg~~~~~~ak~aad~vl~~ 279 (591)
.+..+...+...++. ++...+.++++||+.+|+.+-++|++- +.-|....+.....+|+++.+
T Consensus 162 ----~~KP~p~~~~~a~~~-~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 162 ----HAKPHPDPYLKALEV-LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred ----CCCCChHHHHHHHHH-hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 011122333444444 455567788889999999999999964 333322222334468888763
No 101
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.67 E-value=0.00023 Score=69.32 Aligned_cols=107 Identities=13% Similarity=0.209 Sum_probs=73.9
Q ss_pred CCCCchHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIR-KCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~-~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.|++.+.|+ .++++|++++++|+.....+..+++..++... ...++. ++.. .+ .+. .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t---~le~--~~-gg~-------------~ 153 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIAS---QIER--GN-GGW-------------V 153 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEE---EeEE--eC-Cce-------------E
Confidence 57999999996 78889999999999999999999998766431 233322 1110 00 010 0
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
.-..+..+.|..-++... ........+=||+.||.|||+.||.++++.
T Consensus 154 ~g~~c~g~~Kv~rl~~~~----~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 154 LPLRCLGHEKVAQLEQKI----GSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred cCccCCChHHHHHHHHHh----CCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 112356678888777643 222333434499999999999999999987
No 102
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.64 E-value=0.0006 Score=69.01 Aligned_cols=127 Identities=9% Similarity=0.078 Sum_probs=82.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++-|++.++|+.|++.|+++.++||.....+..+.+..|+....... ++.+.+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~-i~~~~~~~------------------------ 155 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDH-VVTTDDVP------------------------ 155 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceE-EEcCCcCC------------------------
Confidence 57899999999999999999999999999988888887764321111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCC-CCcEEEEECCCCCCHHhhhcCCe---eeeeCCCc----------------------
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSD-SREVVAVTGDGTNDGPALKKADV---GFAMGIAG---------------------- 265 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~-~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~---------------------- 265 (591)
...| +..++...++. ++. ..+.+++|||+.+|+.+-+.||+ |+.-|...
T Consensus 156 --~~KP--~p~~~~~a~~~-l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T PRK13478 156 --AGRP--YPWMALKNAIE-LGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRER 230 (267)
T ss_pred --CCCC--ChHHHHHHHHH-cCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHH
Confidence 0112 22333444444 343 34678888999999999999995 45444221
Q ss_pred --cHHHHhcccccccCCChhHHHHHHH
Q psy8116 266 --TDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 266 --~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.+....-+|+++. ++..+...+.
T Consensus 231 ~~~~l~~~~a~~vi~--~~~~l~~~l~ 255 (267)
T PRK13478 231 ARARLRAAGAHYVID--TIADLPAVIA 255 (267)
T ss_pred HHHHHHHcCCCeehh--hHHHHHHHHH
Confidence 1223445788876 6777766553
No 103
>PRK11590 hypothetical protein; Provisional
Probab=97.64 E-value=0.00041 Score=67.65 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=74.4
Q ss_pred CCCCchHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAI-RKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I-~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.|++.+.| +.+++.|++++++|+.....+..++..+|+.. .+..++.+ +... ..++.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~---l~~~---~tg~~------------- 154 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQ---MQRR---YGGWV------------- 154 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEE---EEEE---EccEE-------------
Confidence 5689999999 57888999999999999999999999999632 23333322 1100 00000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
.-..+..+.|...++... ........+=||+.||.|||+.|+.+++++
T Consensus 155 ~g~~c~g~~K~~~l~~~~----~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 155 LTLRCLGHEKVAQLERKI----GTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCccCCChHHHHHHHHHh----CCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 012356678888777642 223334434499999999999999999987
No 104
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.60 E-value=0.00045 Score=69.24 Aligned_cols=97 Identities=14% Similarity=0.113 Sum_probs=66.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++||.....+..+.++.|+...-... ++.+.+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~-ii~~~~~~------------------------ 153 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDY-NVTTDDVP------------------------ 153 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCce-EEccccCC------------------------
Confidence 57899999999999999999999999999999999999985321111 12221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCC-CCcEEEEECCCCCCHHhhhcCCee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSD-SREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~-~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
...|. ..+....++. +.. ..+.+++|||+.+|+.+-+.||+.
T Consensus 154 --~~KP~--p~~~~~a~~~-l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 154 --AGRPA--PWMALKNAIE-LGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred --CCCCC--HHHHHHHHHH-cCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 01121 2233333333 343 356788889999999999999953
No 105
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.60 E-value=0.00034 Score=68.48 Aligned_cols=125 Identities=21% Similarity=0.263 Sum_probs=82.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC--CCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL--KPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
.++.||+.+.++.|++.|+++.++||.....+..+.+..|+. ..-+. ++.+.+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~--i~~~~~~~--------------------- 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDA--VVCPSDVA--------------------- 142 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCE--EEcCCcCC---------------------
Confidence 479999999999999999999999999999999999999985 21111 11111100
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCC-CcEEEEECCCCCCHHhhhcCCeeee--eC--CCcc-HHHHhcccccccCCCh
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDS-REVVAVTGDGTNDGPALKKADVGFA--MG--IAGT-DVAKEASDIILTDDNF 282 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~-~~~va~iGDg~ND~~mLk~A~vGia--mg--~~~~-~~ak~aad~vl~~~~~ 282 (591)
+..| +..+....+++ +... .+.++++||+.+|+.+-++||+..+ +. .... +.....+|.++. ++
T Consensus 143 -----~~KP--~p~~~~~a~~~-~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~ 212 (220)
T TIGR03351 143 -----AGRP--APDLILRAMEL-TGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SV 212 (220)
T ss_pred -----CCCC--CHHHHHHHHHH-cCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CH
Confidence 0112 33344444444 3443 4788888999999999999998862 32 1111 222345677665 56
Q ss_pred hHHHHH
Q psy8116 283 SSIVKA 288 (591)
Q Consensus 283 ~~i~~~ 288 (591)
..+..+
T Consensus 213 ~~l~~~ 218 (220)
T TIGR03351 213 ADLPAL 218 (220)
T ss_pred HHHHHh
Confidence 655443
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.60 E-value=0.00048 Score=80.18 Aligned_cols=153 Identities=16% Similarity=0.207 Sum_probs=88.7
Q ss_pred CCCCCchHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHH---cCCCCCCCceEEecchh------------hHHhhh---
Q psy8116 131 DPVRPEVPDAIRKC-QRAGITVRMVTGDNINTARSIATK---CGILKPGDDFLILEGKE------------FNRRVR--- 191 (591)
Q Consensus 131 d~lr~~v~~~I~~l-~~aGI~v~~~TGd~~~ta~~ia~~---~gi~~~~~~~i~l~g~~------------~~~~~~--- 191 (591)
-.+.+++.+++++| ++.|+.|+++|||...+....... +++...++..+...|.. ..+.+.
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~ 694 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVM 694 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHH
Confidence 35678999999997 778999999999999999987754 34544444433222210 000000
Q ss_pred -----cccc-------------------hhh----HHH---HhhhcCc--ce-------EEEecChhhHHHHHHHHHHhh
Q psy8116 192 -----DANG-------------------DVQ----QHL---LDKVWPR--LR-------VLARSSPTDKYTLVKGIIDSK 231 (591)
Q Consensus 192 -----~~~~-------------------~~~----~~~---l~~~~~~--~~-------v~~r~sp~~K~~~v~~l~~~~ 231 (591)
...+ +.. .+. +...... .. +=.+..-.+|+.+++.+++..
T Consensus 695 ~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~ 774 (854)
T PLN02205 695 QLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIM 774 (854)
T ss_pred HHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 0000 000 011 1111111 11 112333349999999987531
Q ss_pred --cCCCCcEEEEECCCCCCHHhhhcCC--------------eeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 232 --VSDSREVVAVTGDGTNDGPALKKAD--------------VGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 232 --~~~~~~~va~iGDg~ND~~mLk~A~--------------vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.....+.++++||+.||.+||+.++ ++|.+|. + ..+|.+-+. +.+.+.+++.
T Consensus 775 ~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~-~----~S~A~y~L~--d~~eV~~lL~ 842 (854)
T PLN02205 775 QERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ-K----PSKAKYYLD--DTAEIVRLMQ 842 (854)
T ss_pred HhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECC-C----CccCeEecC--CHHHHHHHHH
Confidence 2334456788899999999999875 5667773 2 245566665 5566665554
No 107
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.56 E-value=0.0005 Score=69.27 Aligned_cols=122 Identities=11% Similarity=0.126 Sum_probs=81.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~~~d~~------------------------ 162 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLAAEDVY------------------------ 162 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEecccCC------------------------
Confidence 5789999999999999999999999999999999999998432121 12221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee-eeCCCccHHHHhcccccccCCChhHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF-AMGIAGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi-amg~~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
+..| +..+....+++ ++...+.+++|||+.+|+.+-+.||+.+ ++.+..+......+|+++. +++.+.
T Consensus 163 --~~KP--~Pe~~~~a~~~-l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 163 --RGKP--DPEMFMYAAER-LGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred --CCCC--CHHHHHHHHHH-hCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHH
Confidence 0112 23344444444 4556677888899999999999999742 3332232322345777766 555554
No 108
>PRK11587 putative phosphatase; Provisional
Probab=97.40 E-value=0.0011 Score=64.77 Aligned_cols=115 Identities=13% Similarity=0.139 Sum_probs=73.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|+++|+++.++|+.....+....+..|+.. .+ .++.+.+..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~--~i~~~~~~~------------------------ 135 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PE--VFVTAERVK------------------------ 135 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-cc--EEEEHHHhc------------------------
Confidence 578999999999999999999999988777777777777732 11 122222110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCccHHHHhccccccc
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGTDVAKEASDIILT 278 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~~~ak~aad~vl~ 278 (591)
+..|. .......++. ++...+.++++||+.+|+.+-+.||+. +++...........+|+++.
T Consensus 136 --~~KP~--p~~~~~~~~~-~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 136 --RGKPE--PDAYLLGAQL-LGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred --CCCCC--cHHHHHHHHH-cCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 01121 2223333333 455667788889999999999999974 55542222222345677665
No 109
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.38 E-value=0.0018 Score=61.61 Aligned_cols=150 Identities=17% Similarity=0.217 Sum_probs=93.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceE--Eecch--------hhHHhhh---cccchhh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFL--ILEGK--------EFNRRVR---DANGDVQ 198 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i--~l~g~--------~~~~~~~---~~~~~~~ 198 (591)
++-|++.++++.+++.= ..+++|-.-..-+..+|.-+|+...+-+.. .++.. ++-..+. +.+++..
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 57799999999998764 455556667778889999999854321111 11100 0100000 1111211
Q ss_pred HHHHhhhcCcceEEEecCh---------------hhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC-ee-eee
Q psy8116 199 QHLLDKVWPRLRVLARSSP---------------TDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD-VG-FAM 261 (591)
Q Consensus 199 ~~~l~~~~~~~~v~~r~sp---------------~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~-vG-iam 261 (591)
-+.+|. +|.|..| ..|..+++.+++.. ......+++||+..|..||+.+. -| +|+
T Consensus 162 fe~lDe------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele--~~d~sa~~VGDSItDv~ml~~~rgrGglAv 233 (315)
T COG4030 162 FEKLDE------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELE--GIDFSAVVVGDSITDVKMLEAARGRGGLAV 233 (315)
T ss_pred HHHHHH------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhc--CCCcceeEecCcccchHHHHHhhccCceEE
Confidence 222222 2333333 37888888888853 44444677899999999999875 33 777
Q ss_pred CCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 262 GIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 262 g~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
.-||.+-+...||+.+...+.......|.
T Consensus 234 aFNGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 234 AFNGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred EecCCcccccccceEEeccchhhhhHHHH
Confidence 77788888888998888777777666665
No 110
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.29 E-value=0.0016 Score=58.29 Aligned_cols=92 Identities=24% Similarity=0.250 Sum_probs=67.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHh
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN--------INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLD 203 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~--------~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~ 203 (591)
++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+. .......+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP---IDVLYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC---EEEEEECC--------------------
Confidence 578999999999999999999999998 77788888888873 11111111
Q ss_pred hhcCcceEEEecChhhHHHHHHHHHHhhc-CCCCcEEEEECC-CCCCHHhhhcCCee
Q psy8116 204 KVWPRLRVLARSSPTDKYTLVKGIIDSKV-SDSREVVAVTGD-GTNDGPALKKADVG 258 (591)
Q Consensus 204 ~~~~~~~v~~r~sp~~K~~~v~~l~~~~~-~~~~~~va~iGD-g~ND~~mLk~A~vG 258 (591)
..+..|.++++.+++. + ....+.++++|| ..+|+.+-+.+|+-
T Consensus 82 -----------~~~KP~~~~~~~~~~~-~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 -----------HCRKPKPGMFLEALKR-FNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -----------CCCCCChHHHHHHHHH-cCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 0112244566666665 4 256677888899 69999999999864
No 111
>PLN03017 trehalose-phosphatase
Probab=97.23 E-value=0.0016 Score=67.89 Aligned_cols=68 Identities=16% Similarity=0.130 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHhhcCC--CCcEEEEECCCCCCHHhhhcC-----CeeeeeCCCccHHHHhcccccccCCChhHHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSD--SREVVAVTGDGTNDGPALKKA-----DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVM 290 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~--~~~~va~iGDg~ND~~mLk~A-----~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i~ 290 (591)
-+|+.+++.|++.+.-. ....++++||...|-.|++.. ++||.+|.... ..+|++.+. +.+.+.+.+.
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~--dp~eV~~fL~ 356 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQ--DPSEVMDFLA 356 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCC--CHHHHHHHHH
Confidence 49999999998863211 234688889999999999865 47777873211 357888886 6777766554
No 112
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.19 E-value=0.0027 Score=66.95 Aligned_cols=123 Identities=14% Similarity=0.102 Sum_probs=81.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.||+.+.++.|+++|+++.++|+.+...+..+.+..||..--+. ++.+.+..
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~--Iv~sddv~----------------------- 269 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV--IVAAEDVY----------------------- 269 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE--EEecCcCC-----------------------
Confidence 35789999999999999999999999999999999999998431111 11111110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCCCccHHHHhcccccccCCChhHHH
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGIAGTDVAKEASDIILTDDNFSSIV 286 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~~~~~~ak~aad~vl~~~~~~~i~ 286 (591)
+..| +..+....++. ++...+.++++||+.+|+.+-+.|++- |++...........+|+++. ++..+.
T Consensus 270 ---~~KP--~Peifl~A~~~-lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL~ 338 (381)
T PLN02575 270 ---RGKP--DPEMFIYAAQL-LNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDELS 338 (381)
T ss_pred ---CCCC--CHHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHHH
Confidence 1112 23344444444 456677788889999999999999964 33332111222235787766 666553
No 113
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.18 E-value=0.0017 Score=63.40 Aligned_cols=100 Identities=15% Similarity=0.172 Sum_probs=69.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|++++++|+.+...+....+.+|+...-+.. +.+.+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i--~~~~~~------------------------- 146 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAV--ITSEEE------------------------- 146 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEE--EEeccC-------------------------
Confidence 68899999999999999999999999988888888999884321111 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee-eeeC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG-FAMG 262 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG-iamg 262 (591)
.+..| +..+.+.+++. +....+.++++||+. +|+.+-++||+- |.+.
T Consensus 147 -~~~KP--~~~~~~~~~~~-~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 147 -GVEKP--HPKIFYAALKR-LGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred -CCCCC--CHHHHHHHHHH-cCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 01112 22334444444 455567788889998 999999999963 4443
No 114
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.17 E-value=0.0022 Score=70.23 Aligned_cols=124 Identities=15% Similarity=0.178 Sum_probs=82.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.. +.+.+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i--~~~d~v------------------------- 382 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTET--FSIEQI------------------------- 382 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhccee--EecCCC-------------------------
Confidence 68899999999999999999999999999999999999984321211 111110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCC-CccHHHHhcccccccCCChhHHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGI-AGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~-~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
.+..|...+...++. +. .+.+.++||+.+|+.+-+.|++- |++.. ...+.....+|+++. ++..+.+.+
T Consensus 383 ----~~~~kP~~~~~al~~-l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 383 ----NSLNKSDLVKSILNK-YD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred ----CCCCCcHHHHHHHHh-cC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 001122344444443 22 35688889999999999999963 33321 112222345788876 777777665
Q ss_pred HH
Q psy8116 290 MW 291 (591)
Q Consensus 290 ~~ 291 (591)
.+
T Consensus 454 ~~ 455 (459)
T PRK06698 454 ST 455 (459)
T ss_pred HH
Confidence 43
No 115
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.12 E-value=0.0014 Score=67.11 Aligned_cols=118 Identities=15% Similarity=0.171 Sum_probs=73.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..+...-.+.+..+.+.+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~------------------------ 199 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP------------------------ 199 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC------------------------
Confidence 68899999999999999999999999988888777665322111111112221110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCCCcc--HHHHhccccccc
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGT--DVAKEASDIILT 278 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~~~~--~~ak~aad~vl~ 278 (591)
. +..+..+...+++. ++...+.+++|||+.+|+.+-+.||+.+..-..+. ......+|+++.
T Consensus 200 --~--~KP~p~~~~~a~~~-~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 200 --K--KKPDPDIYNLAAET-LGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred --C--CCCCHHHHHHHHHH-hCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 0 11222334444444 45556778888999999999999997644321221 111235777765
No 116
>PLN02423 phosphomannomutase
Probab=97.12 E-value=0.0032 Score=62.87 Aligned_cols=34 Identities=18% Similarity=0.416 Sum_probs=28.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
.++.+++.++|++|++. ++++++|||........
T Consensus 23 ~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~ 56 (245)
T PLN02423 23 KEATPEMLEFMKELRKV-VTVGVVGGSDLSKISEQ 56 (245)
T ss_pred CcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHHH
Confidence 35889999999999976 99999999987766543
No 117
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.09 E-value=0.0016 Score=64.02 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=69.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.+.++.|+++|+++.++|+.+...+....+..|+..--+. ++ .+.+.
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~-iv-~s~~~------------------------ 145 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDL-LL-STHTF------------------------ 145 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCE-EE-EeeeC------------------------
Confidence 36789999999999999999999999988888888888887431111 11 11110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
. .++-+..+...+++. ++...+.++++||+.+|+.+-+.||+..
T Consensus 146 --~--~~KP~p~~~~~~~~~-~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 146 --G--YPKEDQRLWQAVAEH-TGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred --C--CCCCCHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 0 112233455555554 4556677888899999999999999863
No 118
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.09 E-value=0.0017 Score=62.38 Aligned_cols=94 Identities=19% Similarity=0.124 Sum_probs=63.7
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
.+++.+++.++++.|+++|+++.++||.....+..+.+.+|+...-+..+. +.+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~--~~~------------------------ 157 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW--MED------------------------ 157 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe--ecC------------------------
Confidence 455677789999999999999999999999999999999998432221111 111
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA 255 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A 255 (591)
+..+..|+. +...++. ++...+.++++||+.+|+.+-++|
T Consensus 158 -~~~KP~p~~----~~~~~~~-~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 -CPPKPNPEP----LILAAKA-LGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred -CCCCcCHHH----HHHHHHH-hCcCcccEEEEeCCHHHHHHHHhC
Confidence 000223332 2333333 345566788889999999887764
No 119
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.05 E-value=0.0021 Score=61.72 Aligned_cols=97 Identities=16% Similarity=0.262 Sum_probs=67.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+-+...+....+.+|+...-+.. +...+..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i--~~s~~~~------------------------ 145 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAV--LSADAVR------------------------ 145 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhhee--EehhhcC------------------------
Confidence 57899999999999999999999999999999999999984321111 1111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
...| +..+.+.+++. ++...+.++++||+.+|+.+-+.||+-.
T Consensus 146 --~~KP--~~~~~~~~~~~-~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 146 --AYKP--APQVYQLALEA-LGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred --CCCC--CHHHHHHHHHH-hCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 0112 23344444444 3445666778899999999999999753
No 120
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.03 E-value=0.0013 Score=67.61 Aligned_cols=109 Identities=15% Similarity=0.101 Sum_probs=73.9
Q ss_pred ccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 129 IEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
..+++.+++.++++.|++.|++++++||+....+..+.+.+|+.. ..+-.+.|.+... ..+....+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~--~~f~~i~~~~~~~-----------~~~~~~~~- 249 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTD--IWFDDLIGRPPDM-----------HFQREQGD- 249 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcC--CchhhhhCCcchh-----------hhcccCCC-
Confidence 467899999999999999999999999999999999999998842 0111111111000 00000000
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
-+..|+-+..+++.+ .....+.++++||..+|+.+-+.||+.+
T Consensus 250 ----~kp~p~~~~~~l~~~----~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 250 ----KRPDDVVKEEIFWEK----IAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ----CCCcHHHHHHHHHHH----hccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 134455566565542 3334578888899999999999999764
No 121
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.99 E-value=0.0063 Score=57.67 Aligned_cols=129 Identities=17% Similarity=0.149 Sum_probs=70.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccch
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNI---------------NTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGD 196 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~ 196 (591)
.+.|++.+++++|+++|+++.++|+... .....+.++.|+.- +. +......-.
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f--~~-i~~~~~~~~--------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL--DG-IYYCPHHPE--------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc--ce-EEECCCCCC---------
Confidence 3679999999999999999999998762 11122333444410 11 110000000
Q ss_pred hhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee-eeeCC-Ccc-HHHHhcc
Q psy8116 197 VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG-FAMGI-AGT-DVAKEAS 273 (591)
Q Consensus 197 ~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG-iamg~-~~~-~~ak~aa 273 (591)
...-..+..| .+....++. +....+.++++||+.+|+.+-+.||+. +++.. ... ......+
T Consensus 97 -----------~~~~~~KP~p----~~~~~~~~~-l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~ 160 (181)
T PRK08942 97 -----------DGCDCRKPKP----GMLLSIAER-LNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAA 160 (181)
T ss_pred -----------CCCcCCCCCH----HHHHHHHHH-cCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccC
Confidence 0000011122 333344443 455667788889999999999999964 22221 111 1222334
Q ss_pred --cccccCCChhHHHHHHH
Q psy8116 274 --DIILTDDNFSSIVKAVM 290 (591)
Q Consensus 274 --d~vl~~~~~~~i~~~i~ 290 (591)
|+++. ++..+.+.+.
T Consensus 161 ~~~~ii~--~l~el~~~l~ 177 (181)
T PRK08942 161 PGTWVLD--SLADLPQALK 177 (181)
T ss_pred CCceeec--CHHHHHHHHH
Confidence 77765 6666665543
No 122
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.96 E-value=0.0029 Score=62.54 Aligned_cols=89 Identities=18% Similarity=0.222 Sum_probs=61.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN----INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
.+.+++.+.++.+++.|+++.++|||. ..++..+.+..|+...+...+.+.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 477789999999999999999999974 6688899988999422221222222210
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.-.+|...++. ...++++||..+|..+-+.||+-
T Consensus 173 --------~K~~K~~~l~~---------~~i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 --------GQYTKTQWLKK---------KNIRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred --------CCCCHHHHHHh---------cCCeEEEcCCHHHHHHHHHcCCc
Confidence 01234443332 12378889999999999999963
No 123
>PRK09449 dUMP phosphatase; Provisional
Probab=96.93 E-value=0.0044 Score=60.75 Aligned_cols=125 Identities=10% Similarity=0.122 Sum_probs=78.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+ +|+++.++|+.....+....++.|+...-+..+ .+.+..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~--~~~~~~------------------------ 147 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLV--ISEQVG------------------------ 147 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEE--EECccC------------------------
Confidence 57899999999999 689999999998888888888888842111111 111000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee-eeeCCCccH-HHHhcccccccCCChhHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG-FAMGIAGTD-VAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG-iamg~~~~~-~ak~aad~vl~~~~~~~i~~~ 288 (591)
.+..+..+...+++.....+.+.+++|||+. +|+.+-+.||+- +.+...+.. .....+|+++. ++..+.+.
T Consensus 148 ----~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 221 (224)
T PRK09449 148 ----VAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQL 221 (224)
T ss_pred ----CCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHH
Confidence 0122334555555553223456788889998 799999999975 333311211 11124677765 67666654
Q ss_pred H
Q psy8116 289 V 289 (591)
Q Consensus 289 i 289 (591)
+
T Consensus 222 l 222 (224)
T PRK09449 222 L 222 (224)
T ss_pred H
Confidence 4
No 124
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.88 E-value=0.0042 Score=61.45 Aligned_cols=87 Identities=23% Similarity=0.253 Sum_probs=59.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGD----NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd----~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
+.+++.+.++.++++|+++.++|++ ...++..+.+.+|+.. ....++.+....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~--~f~~i~~~d~~~--------------------- 171 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA--MNPVIFAGDKPG--------------------- 171 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch--heeEEECCCCCC---------------------
Confidence 4455999999999999999999999 7779999999999943 111222222110
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV 257 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v 257 (591)
...| +|...++ ..+ .++++||+.||+.+-+.|++
T Consensus 172 -----~~Kp-~~~~~l~--------~~~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 172 -----QYQY-TKTQWIQ--------DKN-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred -----CCCC-CHHHHHH--------hCC-CeEEEeCCHHHHHHHHHCCC
Confidence 0012 2322221 112 36888999999999999985
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.85 E-value=0.003 Score=59.77 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=63.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+...-+.. +.+.+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v--~~~~~~------------------------ 138 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAI--VDADEV------------------------ 138 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEe--eehhhC------------------------
Confidence 468999999999999999999999987 6677788888884211111 111100
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..| +..+...+++. +....+.+++|||+.+|+.+-+.||+.
T Consensus 139 --~~~kp--~~~~~~~~~~~-~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 139 --KEGKP--HPETFLLAAEL-LGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred --CCCCC--ChHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 01112 22334444444 344556677889999999999999875
No 126
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.82 E-value=0.0026 Score=60.19 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=62.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...-+. ++.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 137 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDA--IVDPAEI------------------------- 137 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcE--EEehhhc-------------------------
Confidence 6789999999999999999999997542 4567778887432121 1111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+ +..+..+.+..++. ++...+.+++|||+.+|+.+-+.||+-
T Consensus 138 -~~--~kp~p~~~~~~~~~-~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 138 -KK--GKPDPEIFLAAAEG-LGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -CC--CCCChHHHHHHHHH-cCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 01 12233444444444 445566788889999999999999974
No 127
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.80 E-value=0.0038 Score=60.97 Aligned_cols=122 Identities=14% Similarity=0.148 Sum_probs=76.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+.++.|++. +++.++|+.....+..+.++.|+...-+..++ +.+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~--~~~~------------------------- 148 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFV--SEDA------------------------- 148 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEE--cCcc-------------------------
Confidence 5789999999999999 99999999999999999999998432111111 1000
Q ss_pred EEecChhhHHHHHHHHHHhhc-CCCCcEEEEECCCC-CCHHhhhcCCee-eeeCC-CccHHHHhcccccccCCChhHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKV-SDSREVVAVTGDGT-NDGPALKKADVG-FAMGI-AGTDVAKEASDIILTDDNFSSIVK 287 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~-~~~~~~va~iGDg~-ND~~mLk~A~vG-iamg~-~~~~~ak~aad~vl~~~~~~~i~~ 287 (591)
.. +..+..+.+..++. + ....+.+++|||+. +|+.+-+.+|+. +.... ..++.....++.++. ++..+..
T Consensus 149 -~~--~KP~~~~~~~~~~~-~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 149 -GI--QKPDKEIFNYALER-MPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred -CC--CCCCHHHHHHHHHH-hcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 00 11233445555554 3 44556788889998 899999999963 22221 112122234555554 5555543
No 128
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.80 E-value=0.0016 Score=60.38 Aligned_cols=98 Identities=16% Similarity=0.235 Sum_probs=71.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
..++.|++.+.++.|++.|++++++|+..........+.+|+...-+.. .. ..+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i-~~-~~~~----------------------- 129 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEI-IS-SDDV----------------------- 129 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEE-EE-GGGS-----------------------
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccc-cc-cchh-----------------------
Confidence 4568999999999999999999999999999999999999985221211 11 1110
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
..+..+..+.+.+++. ++...+.++++||+..|+.+-+.||+.
T Consensus 130 -----~~~Kp~~~~~~~~~~~-~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 130 -----GSRKPDPDAYRRALEK-LGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp -----SSSTTSHHHHHHHHHH-HTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred -----hhhhhHHHHHHHHHHH-cCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 0122333455566555 355667788889999999999999875
No 129
>PRK06769 hypothetical protein; Validated
Probab=96.79 E-value=0.0044 Score=58.40 Aligned_cols=123 Identities=19% Similarity=0.119 Sum_probs=71.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCCCCCCceEEec--chhhHHhhhcccchhhHHHH
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNIN--------TARSIATKCGILKPGDDFLILE--GKEFNRRVRDANGDVQQHLL 202 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~--------ta~~ia~~~gi~~~~~~~i~l~--g~~~~~~~~~~~~~~~~~~l 202 (591)
+.|++.++++.|++.|+++.++|+.... .+....+..|+. ..+.+.. +.+.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~---~~~~~~~~~~~~~---------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD---DIYLCPHKHGDGC---------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC---EEEECcCCCCCCC----------------
Confidence 6799999999999999999999987631 223334445552 1111110 0000
Q ss_pred hhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee-eeCC-CccH--------HHHhc
Q psy8116 203 DKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF-AMGI-AGTD--------VAKEA 272 (591)
Q Consensus 203 ~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi-amg~-~~~~--------~ak~a 272 (591)
. ...-+..+.+..+++ +....+.+.++||+.+|+.+-++|++-. ++.. .+.+ ..+..
T Consensus 90 ----------~--~~KP~p~~~~~~~~~-l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~ 156 (173)
T PRK06769 90 ----------E--CRKPSTGMLLQAAEK-HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIE 156 (173)
T ss_pred ----------C--CCCCCHHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCC
Confidence 0 011223344444444 4556677888899999999999999643 3321 1221 11234
Q ss_pred ccccccCCChhHHHHHH
Q psy8116 273 SDIILTDDNFSSIVKAV 289 (591)
Q Consensus 273 ad~vl~~~~~~~i~~~i 289 (591)
+|+++. ++..+...+
T Consensus 157 ~~~~~~--~~~el~~~l 171 (173)
T PRK06769 157 PNYIAE--NFEDAVNWI 171 (173)
T ss_pred Ccchhh--CHHHHHHHH
Confidence 666665 566665543
No 130
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.68 E-value=0.009 Score=56.20 Aligned_cols=115 Identities=16% Similarity=0.082 Sum_probs=72.1
Q ss_pred EEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHH
Q psy8116 122 TGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGD-NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200 (591)
Q Consensus 122 ~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 200 (591)
......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+...+|+...+... .+ ..
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------~~------------~~ 96 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------PM------------HS 96 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------cH------------HH
Confidence 344555556678999999999999999999999987 889999999999984211100 00 00
Q ss_pred HHhhhcCcceEEEecChhhH--HHHHHHHHHhhc--CCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 201 LLDKVWPRLRVLARSSPTDK--YTLVKGIIDSKV--SDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 201 ~l~~~~~~~~v~~r~sp~~K--~~~v~~l~~~~~--~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
.++ ..+.+...+..| ..+.+.+.+. + +...+.++++||+..|+.+-++|++-++
T Consensus 97 ~Fd-----~iv~~~~~~~~kp~~~i~~~~~~~-~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 97 LFD-----DRIEIYKPNKAKQLEMILQKVNKV-DPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred hce-----eeeeccCCchHHHHHHHHHHhhhc-ccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 000 011111111112 1223332221 2 2456788888999999999999997654
No 131
>PLN02940 riboflavin kinase
Probab=96.68 E-value=0.0052 Score=65.53 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=65.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIAT-KCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~-~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.+.++.|++.|+++.++|+.....+..... ..|+...-+. ++.+.+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~--ii~~d~v------------------------ 146 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSV--IVGGDEV------------------------ 146 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCE--EEehhhc------------------------
Confidence 578999999999999999999999999888877665 5777322121 1111111
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..| +.++....++. +....+.++++||+.+|+.+-+.||+.
T Consensus 147 --~~~KP--~p~~~~~a~~~-lgv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 147 --EKGKP--SPDIFLEAAKR-LNVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred --CCCCC--CHHHHHHHHHH-cCCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 01112 23344444444 455567788889999999999999975
No 132
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.63 E-value=0.0083 Score=56.41 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=63.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.++++.|+++|+++.++|+..... ..+..++|+...-+..+ .+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~--~~~~~------------------------- 136 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVI--FSGDV------------------------- 136 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEE--EcCCC-------------------------
Confidence 688999999999999999999999988877 55555688843211111 11110
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
....| +....+.+++. +....+.+.++||+..|+.+-+++|+-
T Consensus 137 -~~~KP--~~~~~~~~~~~-~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 137 -GRGKP--DPDIYLLALKK-LGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred -CCCCC--CHHHHHHHHHH-cCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 00111 22333444444 344567778889999999999998873
No 133
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.58 E-value=0.0097 Score=55.88 Aligned_cols=87 Identities=21% Similarity=0.209 Sum_probs=62.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN-INTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+.|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ..+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~-------~~~--------------------------- 88 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV-------LPH--------------------------- 88 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------EcC---------------------------
Confidence 578999999999999999999999988 566777777777621 000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG 258 (591)
...| +..+...+++. +....+.+++|||.. .|+.+-+.||+-
T Consensus 89 ---~~KP--~p~~~~~~l~~-~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 89 ---AVKP--PGCAFRRAHPE-MGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred ---CCCC--ChHHHHHHHHH-cCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 0112 23344444444 355567788889998 799999999963
No 134
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.50 E-value=0.01 Score=54.29 Aligned_cols=99 Identities=19% Similarity=0.176 Sum_probs=64.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceEEecc-hhhHHhhhcccc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNI---------------NTARSIATKCGILKPGDDFLILEG-KEFNRRVRDANG 195 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~l~g-~~~~~~~~~~~~ 195 (591)
++.|++.++++.|++.|+++.++|+.+. ..+..+.+.+|+... ..+....+ .+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCC---------
Confidence 4789999999999999999999998762 345566677777310 00110000 000
Q ss_pred hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 196 ~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
......|..+++.+++. ++...+.+++|||+..|+.+-+.+++-.
T Consensus 97 ------------------~~~~KP~~~~~~~~~~~-~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 97 ------------------CSCRKPKPGLILEALKR-LGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------------------CCCCCCCHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00012345556666665 4556677888899999999999998753
No 135
>PLN02811 hydrolase
Probab=96.48 E-value=0.0098 Score=58.25 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=58.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCCCCCCceEEecch--hhHHhhhcccchhhHHHHhhhcC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS-IATKCGILKPGDDFLILEGK--EFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~-ia~~~gi~~~~~~~i~l~g~--~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
-++.|++.+.|+.|++.|+++.++||........ ..+..++...-+.. +.+. +..
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i--~~~~~~~~~-------------------- 134 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHV--VTGDDPEVK-------------------- 134 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEE--EECChhhcc--------------------
Confidence 4578999999999999999999999987654432 22222332111111 1111 100
Q ss_pred cceEEEecChhhHHHHHHHHHHhhc--CCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKV--SDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~--~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
+..| +..+....++.+. ....+.+++|||+..|+.+-++||+.
T Consensus 135 ------~~KP--~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 135 ------QGKP--APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred ------CCCC--CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 0111 2223333333322 24456788889999999999999964
No 136
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.41 E-value=0.0058 Score=56.51 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=72.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCce-EEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDF-LILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++|+-++.++.+++.+++|+++||-...-...+-..++=-..-.+. ++.|...+ ..++ ....
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i-----h~dg-----------~h~i 136 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI-----HIDG-----------QHSI 136 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE-----cCCC-----------ceee
Confidence 58999999999999999999999998888888887776511000000 11111100 0000 0000
Q ss_pred EEEecC--hhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeee
Q psy8116 211 VLARSS--PTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAM 261 (591)
Q Consensus 211 v~~r~s--p~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiam 261 (591)
+....+ ..+|...++.+ .++.+.+.++|||+.|+++-+.+|+=+|=
T Consensus 137 ~~~~ds~fG~dK~~vI~~l-----~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 137 KYTDDSQFGHDKSSVIHEL-----SEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred ecCCccccCCCcchhHHHh-----hcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 111112 35899999984 56677799999999999999999988863
No 137
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.40 E-value=0.057 Score=54.02 Aligned_cols=50 Identities=14% Similarity=0.110 Sum_probs=41.4
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTG---DNINTARSIATKCGILKP 174 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TG---d~~~ta~~ia~~~gi~~~ 174 (591)
|++.-.+.+-|++.++|++|+++|++++++|| +.........+++|+..+
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44444566677999999999999999999995 888888888889998654
No 138
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.39 E-value=0.005 Score=60.26 Aligned_cols=97 Identities=10% Similarity=0.075 Sum_probs=66.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
-++.|++.++++.| ++++.++|+.....+....+..|+...-+. .++.+.+..
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~~----------------------- 139 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDIQ----------------------- 139 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhcC-----------------------
Confidence 45778999999998 499999999998888888888888431111 122222111
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
.++-+..+....++. +....+.++++||+.+|+.+-++||+.+.
T Consensus 140 -----~~KP~p~~~~~a~~~-~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 140 -----RWKPDPALMFHAAEA-MNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred -----CCCCChHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 112233444444444 45556778889999999999999998764
No 139
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.35 E-value=0.014 Score=55.07 Aligned_cols=122 Identities=18% Similarity=0.093 Sum_probs=65.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH---------------HHHHHHHHcCCCCCCCceE-EecchhhHHhhhcccch
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNIN---------------TARSIATKCGILKPGDDFL-ILEGKEFNRRVRDANGD 196 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~---------------ta~~ia~~~gi~~~~~~~i-~l~g~~~~~~~~~~~~~ 196 (591)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+.- +..+ +..+..-.....
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~~~~~~~~~~~~----- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL--DGIYYCPHHPEGVEEFR----- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc--cEEEECCCCCccccccc-----
Confidence 6789999999999999999999986631 1112233333310 0000 000000000000
Q ss_pred hhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee--eeCCCcc---HHHHh
Q psy8116 197 VQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF--AMGIAGT---DVAKE 271 (591)
Q Consensus 197 ~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi--amg~~~~---~~ak~ 271 (591)
. -... ..-+..++...+++ ++...+.++|+||..+|+.+-+.|++.. .+. .+. .....
T Consensus 100 -----------~--~~~~--~KP~p~~~~~a~~~-~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~ 162 (176)
T TIGR00213 100 -----------Q--VCDC--RKPKPGMLLQARKE-LHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAEN 162 (176)
T ss_pred -----------C--CCCC--CCCCHHHHHHHHHH-cCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccc
Confidence 0 0000 12234455555555 4555667778899999999999999853 332 222 12123
Q ss_pred ccccccc
Q psy8116 272 ASDIILT 278 (591)
Q Consensus 272 aad~vl~ 278 (591)
.+|+++.
T Consensus 163 ~ad~~i~ 169 (176)
T TIGR00213 163 IADWVLN 169 (176)
T ss_pred cCCEEec
Confidence 4777775
No 140
>PRK10444 UMP phosphatase; Provisional
Probab=96.33 E-value=0.049 Score=54.46 Aligned_cols=48 Identities=15% Similarity=0.284 Sum_probs=41.4
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK---CGIL 172 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~---~gi~ 172 (591)
|++.-.+.+-|++.++|+.|+++|++++++||+...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 56666678899999999999999999999999999888887776 4763
No 141
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.30 E-value=0.013 Score=53.69 Aligned_cols=93 Identities=16% Similarity=0.223 Sum_probs=62.7
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
+.+..+++.+.++.|++.|+++.++|+.....+....+.. +... ...+...+ +
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~~i~~~~-~------------------------ 114 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FDLILGSD-E------------------------ 114 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-CcEEEecC-C------------------------
Confidence 4445689999999999999999999999999988877765 4211 11111110 0
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCC
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKAD 256 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~ 256 (591)
..+..+......+++++ +... .++++||+.+|+.+-+.|+
T Consensus 115 -----~~~Kp~~~~~~~~~~~~-~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 115 -----FGAKPEPEIFLAALESL-GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -----CCCCcCHHHHHHHHHHc-CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 00122345566666653 4444 7888899999999888775
No 142
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.30 E-value=0.011 Score=55.09 Aligned_cols=97 Identities=21% Similarity=0.178 Sum_probs=64.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCCCCCCceEEec----chhhHHhhhc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDN---------------INTARSIATKCGILKPGDDFLILE----GKEFNRRVRD 192 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~---------------~~ta~~ia~~~gi~~~~~~~i~l~----g~~~~~~~~~ 192 (591)
++-|++.++|+.|+++|+++.++|... ...+..+.+.+|+. -+. +... +.+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~-ii~~~~~~~~~~------ 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDD-VLICPHFPDDNC------ 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeE-EEECCCCCCCCC------
Confidence 467999999999999999999999852 34556667777772 001 1111 0000
Q ss_pred ccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 193 ANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 193 ~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
. ...-|..++..+++. +....+.+.+|||+.+|+.+-+.|++...
T Consensus 100 -------------------~---~~KP~~~~~~~~~~~-~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 -------------------D---CRKPKIKLLEPYLKK-NLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------------C---CCCCCHHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0 012334555555555 45556778888999999999999997643
No 143
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.28 E-value=0.015 Score=55.91 Aligned_cols=95 Identities=17% Similarity=0.230 Sum_probs=62.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++-|++.++++.|+++|+++.++|+-... +....+.+|+...-+..+ ...+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~--~s~~~------------------------- 156 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVV--TSYEV------------------------- 156 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEE--eeccc-------------------------
Confidence 57899999999999999999999986654 466777788732111111 11000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG 258 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG 258 (591)
....| +..+.+.+++. ++...+.+++|||+. +|+.+-++||+-
T Consensus 157 -~~~KP--~~~~~~~~~~~-~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 157 -GAEKP--DPKIFQEALER-AGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred -CCCCC--CHHHHHHHHHH-cCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 00112 22445555554 456667788889997 899999988764
No 144
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.94 E-value=0.19 Score=50.57 Aligned_cols=48 Identities=23% Similarity=0.317 Sum_probs=37.8
Q ss_pred EEeeccCC----CCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy8116 125 CVVGIEDP----VRPEVPDAIRKCQRAGITVRMVTGDNINT---ARSIATKCGIL 172 (591)
Q Consensus 125 G~i~i~d~----lr~~v~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 172 (591)
|++.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44445555 88999999999999999999999987776 44555667874
No 145
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.92 E-value=0.021 Score=59.45 Aligned_cols=95 Identities=11% Similarity=0.138 Sum_probs=73.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK----CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWP 207 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~----~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~ 207 (591)
++.+++.++|+.|+++|+++.++|..+...+..+.++ +|+. +++..+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~---~~f~~~-------------------------- 81 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA---EDFDAR-------------------------- 81 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH---HHeeEE--------------------------
Confidence 3578999999999999999999999999999998887 6662 111111
Q ss_pred cceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeC
Q psy8116 208 RLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMG 262 (591)
Q Consensus 208 ~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg 262 (591)
...+..|...++.+++. +....+.++++||...|+.+.+.+...+.+-
T Consensus 82 ------~~~~~pk~~~i~~~~~~-l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 82 ------SINWGPKSESLRKIAKK-LNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ------EEecCchHHHHHHHHHH-hCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 22245677888887777 4556677888899999999999988776544
No 146
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.88 E-value=0.0089 Score=54.74 Aligned_cols=94 Identities=14% Similarity=0.063 Sum_probs=64.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCc-eEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDD-FLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~-~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
+++|++.+.++.|+ .|+++.++|+-+...+..+.+.+|+.. .. ..++.+.+..
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~--~~f~~i~~~~d~~----------------------- 98 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKK--YFGYRRLFRDECV----------------------- 98 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCC--CEeeeEEECcccc-----------------------
Confidence 57999999999998 579999999999999999999998732 11 1112222110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
+..|. ..+.+ +. +....+.+.++||+.+|..+-+.|++-+.
T Consensus 99 ---~~KP~----~~k~l-~~-l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 99 ---FVKGK----YVKDL-SL-LGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ---ccCCe----EeecH-HH-cCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 01121 22222 22 45566778888999999999888876654
No 147
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.84 E-value=0.032 Score=52.18 Aligned_cols=94 Identities=13% Similarity=0.120 Sum_probs=60.9
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHH
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNIN------------TARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~------------ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 200 (591)
+-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+.. ..++..+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~---~~ii~~~~~~-------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI---QVLAATHAGL-------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE---EEEEecCCCC--------------
Confidence 4599999999999999999999975542 4566778888731 1221111100
Q ss_pred HHhhhcCcceEEEecChhhHHHHHHHHHHhhcC--CCCcEEEEECCCC--------CCHHhhhcCCeee
Q psy8116 201 LLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVS--DSREVVAVTGDGT--------NDGPALKKADVGF 259 (591)
Q Consensus 201 ~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~--~~~~~va~iGDg~--------ND~~mLk~A~vGi 259 (591)
.+.-+..+++.+++. ++ ...+.+++|||.. +|+.+-++||+-+
T Consensus 106 ---------------~~KP~p~~~~~~~~~-~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 106 ---------------YRKPMTGMWEYLQSQ-YNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---------------CCCCccHHHHHHHHH-cCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 011223344444444 33 4456788889986 6999999988765
No 148
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.76 E-value=0.1 Score=51.86 Aligned_cols=48 Identities=19% Similarity=0.131 Sum_probs=38.1
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR--SIATKCGIL 172 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~--~ia~~~gi~ 172 (591)
|++.-.+.+-|++.++++.|+++|+++.++|......+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 444556778999999999999999999999986554443 566788884
No 149
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.75 E-value=0.028 Score=50.04 Aligned_cols=95 Identities=11% Similarity=0.122 Sum_probs=61.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGD-NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..|. .+ .+.+ +. ..++.+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~---~~---~i~~--l~------------~~f~~~----- 83 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED---FG---IIFP--LA------------EYFDPL----- 83 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc---cc---cchh--hH------------hhhhhh-----
Confidence 78999999999999999999999999 77777777666661 00 0000 00 000000
Q ss_pred EEEecChhhHHHHHHHHHHhhcC--CCCcEEEEECCCCCCHHhhhc
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVS--DSREVVAVTGDGTNDGPALKK 254 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~--~~~~~va~iGDg~ND~~mLk~ 254 (591)
+.....| |.+.+...++. ++ ...+.++++||...|...+++
T Consensus 84 ~~~~~~p--kp~~~~~a~~~-lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 84 TIGYWLP--KSPRLVEIALK-LNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred hhcCCCc--HHHHHHHHHHH-hcCCCCcceEEEECCCHhHHHHHHh
Confidence 1111123 45556666665 45 567888889999999877654
No 150
>PLN02151 trehalose-phosphatase
Probab=95.74 E-value=0.024 Score=59.04 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHhhcCCC---CcEEEEECCCCCCHHhhhcC-----CeeeeeCCCccHHHHhcccccccCCChhHHHHHH
Q psy8116 218 TDKYTLVKGIIDSKVSDS---REVVAVTGDGTNDGPALKKA-----DVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV 289 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~---~~~va~iGDg~ND~~mLk~A-----~vGiamg~~~~~~ak~aad~vl~~~~~~~i~~~i 289 (591)
-+|+.+++.++++. ... ...++++||...|-.|++.. |+||.+|.... ...|++.+. +-+.+.+.+
T Consensus 268 ~dKG~Av~~Ll~~~-~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~--dp~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESL-GYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQ--EPDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhc-ccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCC--CHHHHHHHH
Confidence 49999999998763 222 23578889999999999853 67777762111 236888887 667776665
Q ss_pred H
Q psy8116 290 M 290 (591)
Q Consensus 290 ~ 290 (591)
.
T Consensus 342 ~ 342 (354)
T PLN02151 342 E 342 (354)
T ss_pred H
Confidence 4
No 151
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.67 E-value=0.046 Score=65.76 Aligned_cols=132 Identities=14% Similarity=0.149 Sum_probs=82.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
.+-|++.+.++.|+++|+++.++|+.....+....++.|+....-+. ++.+.+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~-iv~~~~~------------------------- 214 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDA-IVSADAF------------------------- 214 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCE-EEECccc-------------------------
Confidence 46899999999999999999999999999999998999984111111 1111111
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe---eeeeCCCccHHHHhcccccccCCChhHHHHH
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV---GFAMGIAGTDVAKEASDIILTDDNFSSIVKA 288 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v---Giamg~~~~~~ak~aad~vl~~~~~~~i~~~ 288 (591)
.+..| +.++....++. ++...+.++++||..+|+.+-+.|++ ++.-+....+.....+|+++.+-..-++..+
T Consensus 215 -~~~KP--~Pe~~~~a~~~-lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~ 290 (1057)
T PLN02919 215 -ENLKP--APDIFLAAAKI-LGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDI 290 (1057)
T ss_pred -ccCCC--CHHHHHHHHHH-cCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHH
Confidence 01122 23344444444 45556678888999999999999996 3333322233444567777763322234444
Q ss_pred HHHHH
Q psy8116 289 VMWGR 293 (591)
Q Consensus 289 i~~gR 293 (591)
+..|-
T Consensus 291 ~~~~~ 295 (1057)
T PLN02919 291 LTGGS 295 (1057)
T ss_pred HhcCC
Confidence 33333
No 152
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.65 E-value=0.052 Score=53.20 Aligned_cols=99 Identities=11% Similarity=0.168 Sum_probs=66.5
Q ss_pred ccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CCCCCCceEEecchhhHHhhhcccchhhHHHHhhh
Q psy8116 129 IEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCG---ILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKV 205 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g---i~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~ 205 (591)
.+-++.|++.+++++|+++|+++.++|..+......+.+..+ +.. . ++..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~---~------------------------f~~~ 144 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP---Y------------------------FSGY 144 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh---h------------------------cceE
Confidence 345799999999999999999999999988877776665542 211 0 0000
Q ss_pred cCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 206 WPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 206 ~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
.. ....+..+......+++. ++...+.++++||...|+.+-++||+-..
T Consensus 145 fd-----~~~g~KP~p~~y~~i~~~-lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 145 FD-----TTVGLKTEAQSYVKIAGQ-LGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred EE-----eCcccCCCHHHHHHHHHH-hCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 00 001122233445555555 45556778899999999999999997543
No 153
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.53 E-value=0.086 Score=51.98 Aligned_cols=118 Identities=19% Similarity=0.269 Sum_probs=74.4
Q ss_pred CCCCchHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 132 PVRPEVPDAIRKC--QRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 132 ~lr~~v~~~I~~l--~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
|+.|+.+++++.+ ++.|+.+.++|.-|......+.+.-|+...-.. +.-|-..++. .+.... . ....
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~-I~TNpa~~~~-----~G~l~v---~--pyh~ 139 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE-IFTNPACFDA-----DGRLRV---R--PYHS 139 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce-EEeCCceecC-----CceEEE---e--CccC
Confidence 6889999999999 568999999999999999999999998532111 2222222211 111000 0 0000
Q ss_pred eEEEecCh-hhHHHHHHHHHHhhcC--CCCcEEEEECCCCCCHH-hhh--cCCeeee
Q psy8116 210 RVLARSSP-TDKYTLVKGIIDSKVS--DSREVVAVTGDGTNDGP-ALK--KADVGFA 260 (591)
Q Consensus 210 ~v~~r~sp-~~K~~~v~~l~~~~~~--~~~~~va~iGDg~ND~~-mLk--~A~vGia 260 (591)
.-+.++.| .-|+.+++.+++...+ ...+.|.++|||.||.. +++ .+|+-++
T Consensus 140 h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 140 HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFP 196 (234)
T ss_pred CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEec
Confidence 11223433 4799999988775322 23478888999999964 443 4565554
No 154
>KOG3120|consensus
Probab=95.22 E-value=0.086 Score=50.45 Aligned_cols=122 Identities=23% Similarity=0.297 Sum_probs=73.7
Q ss_pred CCCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCceE-Ee-cchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 132 PVRPEVPDAIRKCQRAGI-TVRMVTGDNINTARSIATKCGILKPGDDFL-IL-EGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~l-~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
|+.|+..++|+.+++.|. .++++|--|.-....+.+..|+.. .+- +. |-.. .+..|...-. -+..
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d---~F~~IfTNPa~-----~da~G~L~v~----pyH~ 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD---LFSEIFTNPAC-----VDASGRLLVR----PYHT 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH---HHHHHhcCCcc-----cCCCCcEEee----cCCC
Confidence 788999999999999997 999999999999999988888731 000 00 0000 0111110000 0001
Q ss_pred ceEEEecCh-hhHHHHHHHHHHhhcCC--CCcEEEEECCCCCCH-HhhhcCCeeeeeCCCc
Q psy8116 209 LRVLARSSP-TDKYTLVKGIIDSKVSD--SREVVAVTGDGTNDG-PALKKADVGFAMGIAG 265 (591)
Q Consensus 209 ~~v~~r~sp-~~K~~~v~~l~~~~~~~--~~~~va~iGDg~ND~-~mLk~A~vGiamg~~~ 265 (591)
..-+.++.+ .=|+.++..+..+..++ +.+.+..+|||.||. |+++...--+||--.|
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkg 212 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKG 212 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCC
Confidence 112223222 25787777765553433 334788889999995 7777766666765444
No 155
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.12 E-value=0.081 Score=55.48 Aligned_cols=102 Identities=22% Similarity=0.119 Sum_probs=63.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGD---------------NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANG 195 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~ 195 (591)
-++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.- + .+.+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d-~i~i~~~~~sd------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--D-EVLICPHFPED------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--e-eEEEeCCcCcc-------
Confidence 358899999999999999999999984 2334555666666621 1 11111000000
Q ss_pred hhhHHHHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeee
Q psy8116 196 DVQQHLLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFA 260 (591)
Q Consensus 196 ~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGia 260 (591)
... ....|..++..+++. +....+.+.||||+.+|..+-+.|++-..
T Consensus 99 --------------~~~---~rKP~p~~l~~a~~~-l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --------------NCS---CRKPKTGLVEEYLAE-GAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --------------cCC---CCCCCHHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 000 112334455444443 34556778888999999999999998644
No 156
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.05 E-value=0.12 Score=52.06 Aligned_cols=87 Identities=14% Similarity=0.185 Sum_probs=58.1
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINT---ARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVW 206 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~ 206 (591)
..++-|++.+.++.+++.|+++.++|++.... +....++.|+.......+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lll------------------------- 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLL------------------------- 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEe-------------------------
Confidence 45678999999999999999999999988443 34556678885322222222
Q ss_pred CcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhh
Q psy8116 207 PRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALK 253 (591)
Q Consensus 207 ~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk 253 (591)
|.....|..-.+.+. ..-.+++++||..+|.....
T Consensus 171 -------r~~~~~K~~rr~~I~-----~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 -------KKDKSSKESRRQKVQ-----KDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred -------CCCCCCcHHHHHHHH-----hcCCEEEEECCCHHHhhhhh
Confidence 222223444444432 23567999999999986543
No 157
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.90 E-value=0.23 Score=45.68 Aligned_cols=108 Identities=18% Similarity=0.204 Sum_probs=73.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH---HHHc-----CCCCCCCceEEecchhhHHhhhcccchhhHHHH
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI---ATKC-----GILKPGDDFLILEGKEFNRRVRDANGDVQQHLL 202 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i---a~~~-----gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l 202 (591)
|..++++.+..+.+++.|.+++.+|+|+.-.+... .... ++ |.+..+.-...-+....
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~l--P~Gpv~~sP~~l~~al~------------ 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNL--PDGPVLLSPDSLFSALH------------ 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccC--CCCCEEECCcchhhhhh------------
Confidence 68999999999999999999999999997665533 3333 44 22332221111111110
Q ss_pred hhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 203 DKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 203 ~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
-.+..+...+.|...++.+++.........++..|...+|+.+.+++++.
T Consensus 92 ------rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 ------REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ------ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 01333444568999999887764445677888889999999999988765
No 158
>PHA02597 30.2 hypothetical protein; Provisional
Probab=94.72 E-value=0.1 Score=50.02 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=59.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.|++.+++++|++.+ +.+++|..+........+.+|+..-.... . ...+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~---------------------------f-~~i~ 124 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGA---------------------------F-SEVL 124 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCc---------------------------c-cEEE
Confidence 47899999999999985 56667765554444455566663110000 0 0011
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcC--Ceee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKA--DVGF 259 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A--~vGi 259 (591)
.+... ..|..++..+++. ++ .+.++++||..+|+.+-++| |+-.
T Consensus 125 ~~~~~-~~kp~~~~~a~~~-~~--~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 125 MCGHD-ESKEKLFIKAKEK-YG--DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred EeccC-cccHHHHHHHHHH-hC--CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 12221 1245666666665 34 56688889999999999999 9853
No 159
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=94.69 E-value=0.031 Score=55.37 Aligned_cols=68 Identities=21% Similarity=0.289 Sum_probs=32.6
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCC---CcEEEEECCCCCCHHhhhcC------CeeeeeCCCccHHHHhcccccccC
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDS---REVVAVTGDGTNDGPALKKA------DVGFAMGIAGTDVAKEASDIILTD 279 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~---~~~va~iGDg~ND~~mLk~A------~vGiamg~~~~~~ak~aad~vl~~ 279 (591)
+-.|..-.+|+.+++.+++.. ... ...++++||...|-.|++.. ++++.++....-....+|++-+.|
T Consensus 157 vEvrp~~~~KG~av~~ll~~~-~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEEL-PFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS----------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EEEEeCCCChHHHHHHHHHhc-CccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 334555568999999987652 222 45788889999999999874 567777743322334566665553
No 160
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=94.60 E-value=0.12 Score=49.60 Aligned_cols=97 Identities=12% Similarity=0.141 Sum_probs=60.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK-CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
++.|++.++++.|+++|+++.++|+-+.......... .++...-+. +. ...+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~-v~-~s~~~------------------------ 137 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADH-IY-LSQDL------------------------ 137 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCE-EE-Eeccc------------------------
Confidence 5789999999999999999999999876554432222 233110010 00 00000
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
...+.+..+.+.+++. ++...+.+.++||+..|+.+-++||+..
T Consensus 138 ----~~~KP~p~~~~~~~~~-~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 138 ----GMRKPEARIYQHVLQA-EGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred ----CCCCCCHHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 0112234455555555 4566677788899999999999999753
No 161
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.51 E-value=0.065 Score=51.91 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=57.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINT--ARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t--a~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
-++.|++.++++.|+++|+++.++|+..... ........++...-+..+ ...+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~--~s~~----------------------- 147 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVV--ESCL----------------------- 147 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEE--Eeee-----------------------
Confidence 3578999999999999999999999865433 222222233311101110 0000
Q ss_pred ceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 209 LRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 209 ~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
+- ...|. ..+.+.+++. ++...+.++++||...|+.+-++||+-
T Consensus 148 --~~-~~KP~--p~~~~~~~~~-~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 148 --EG-LRKPD--PRIYQLMLER-LGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred --cC-CCCCC--HHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 00 01122 2334444444 455566677789999999999999974
No 162
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.44 E-value=0.19 Score=46.18 Aligned_cols=86 Identities=22% Similarity=0.331 Sum_probs=62.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
...|++.+-+.+++++|+++.++|..+...+...+.++|+. ++.-.++
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~-----fi~~A~K--------------------------- 93 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP-----FIYRAKK--------------------------- 93 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc-----eeecccC---------------------------
Confidence 37789999999999999999999999999999999999983 2222222
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCe
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADV 257 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~v 257 (591)
|-.+ .+-+++.+ ++...+.|+|+||.. .|+-+=..||+
T Consensus 94 -----P~~~-~fr~Al~~--m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 94 -----PFGR-AFRRALKE--MNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred -----ccHH-HHHHHHHH--cCCChhHEEEEcchhhhhhhcccccCc
Confidence 2111 12233333 577788899999986 58877666664
No 163
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.70 E-value=0.3 Score=47.87 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=34.5
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINT---ARSIATKCGIL 172 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 172 (591)
+-|.-|++.++++.+++.|++|+++|||.... +..-.++.|+.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 34788999999999999999999999999765 33444566763
No 164
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=93.61 E-value=0.25 Score=46.70 Aligned_cols=98 Identities=14% Similarity=0.093 Sum_probs=63.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++.+++.+++++|+ .++.++|+.+...+....+..|+...-+.+++. .+....
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~--~~~~~~---------------------- 136 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCF--DTANPD---------------------- 136 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEe--ecccCc----------------------
Confidence 47789999999997 478999999999999999999984321211111 110000
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeee
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGi 259 (591)
.....| +..+.+.+++. ++...+.++++||...|+.+-+.||+..
T Consensus 137 ~~~~KP--~p~~~~~~~~~-~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 137 YLLPKP--SPQAYEKALRE-AGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred cCCCCC--CHHHHHHHHHH-hCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 000122 33455555555 4555666778899999999999998754
No 165
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=93.39 E-value=0.49 Score=47.56 Aligned_cols=127 Identities=13% Similarity=0.131 Sum_probs=78.8
Q ss_pred ccCCCCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHH--cCCCCCCCceE-Eecchh---------------hHHh
Q psy8116 129 IEDPVRPEVPDAIRKCQRA-GITVRMVTGDNINTARSIATK--CGILKPGDDFL-ILEGKE---------------FNRR 189 (591)
Q Consensus 129 i~d~lr~~v~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~--~gi~~~~~~~i-~l~g~~---------------~~~~ 189 (591)
....+.++..+.+++|... ...++++|||..........- +|+...++... ..+|.. +...
T Consensus 37 ~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~ 116 (266)
T COG1877 37 EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAI 116 (266)
T ss_pred cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHH
Confidence 3456888999999999988 557999999999998887663 33333333333 334431 1111
Q ss_pred h----hcccc--------------------h-hhH---HH--------HhhhcCcceEEEecChhhHHHHHHHHHHhhcC
Q psy8116 190 V----RDANG--------------------D-VQQ---HL--------LDKVWPRLRVLARSSPTDKYTLVKGIIDSKVS 233 (591)
Q Consensus 190 ~----~~~~~--------------------~-~~~---~~--------l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~ 233 (591)
+ ....| + ... .. +.-...+..|-+|.+-..|+.+++.+.++ ..
T Consensus 117 l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~-~~ 195 (266)
T COG1877 117 LEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDE-LP 195 (266)
T ss_pred HHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhc-CC
Confidence 1 11111 0 000 00 00111233456777777899999988776 34
Q ss_pred CCCcEEEEECCCCCCHHhhhcCC
Q psy8116 234 DSREVVAVTGDGTNDGPALKKAD 256 (591)
Q Consensus 234 ~~~~~va~iGDg~ND~~mLk~A~ 256 (591)
..+..+.+.||...|-.|++..+
T Consensus 196 ~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 196 FDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCCcceecCCCCccHHHHHhhc
Confidence 44456777799999999999887
No 166
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=93.05 E-value=0.3 Score=46.12 Aligned_cols=93 Identities=11% Similarity=0.091 Sum_probs=61.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEE
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVL 212 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 212 (591)
+.| ..+.++.+++. +++.++||.....+....+..|+...-+. ++.+.+..
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~--i~~~~~~~------------------------- 139 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDA--VVAADDVQ------------------------- 139 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceE--EEehhhcc-------------------------
Confidence 345 46899999865 89999999999999999999998432111 11111110
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..+..+.....+. ++...+.+.++||+.+|+.+-+.||+-
T Consensus 140 ---~~KP~p~~~~~~~~~-~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 140 ---HHKPAPDTFLRCAQL-MGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred ---CCCCChHHHHHHHHH-cCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 012233344444444 444556677889999999999999975
No 167
>PLN02645 phosphoglycolate phosphatase
Probab=92.69 E-value=0.31 Score=50.41 Aligned_cols=48 Identities=17% Similarity=0.245 Sum_probs=39.1
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIA---TKCGIL 172 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~ 172 (591)
|++--.+.+-|++.++|+.|++.|++++++|++...+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444445667799999999999999999999999977777766 457763
No 168
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=92.28 E-value=0.9 Score=44.49 Aligned_cols=97 Identities=18% Similarity=0.227 Sum_probs=70.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.++.|++.+.++.|++.|+.+.++|+.....+..+....|+...-+ ..+.+.+..+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~--~~v~~~dv~~---------------------- 140 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD--VIVTADDVAR---------------------- 140 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc--hhccHHHHhc----------------------
Confidence 4789999999999999999999999999999999999999964211 1233333211
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..|+-=....+. ++-....+.++.|+.|.+.+-++||.-
T Consensus 141 --~KP~Pd~yL~Aa~~-----Lgv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 141 --GKPAPDIYLLAAER-----LGVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred --CCCCCHHHHHHHHH-----cCCChHHeEEEecchhHHHHHHHCCCE
Confidence 12334443444444 445566667779999999999999954
No 169
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.08 E-value=0.71 Score=43.06 Aligned_cols=91 Identities=22% Similarity=0.195 Sum_probs=62.1
Q ss_pred cCCCCCchHHHHHHHHHcCC--EEEEEcCC-------CHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHH
Q psy8116 130 EDPVRPEVPDAIRKCQRAGI--TVRMVTGD-------NINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQH 200 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI--~v~~~TGd-------~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~ 200 (591)
++.+.|+..+.+++|++.+. +|.++|.. +...|..+.+.+|+.- +
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv-----l--------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV-----L--------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE-----E---------------------
Confidence 45688999999999999987 49999986 4788999999999721 0
Q ss_pred HHhhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCC
Q psy8116 201 LLDKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKAD 256 (591)
Q Consensus 201 ~l~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~ 256 (591)
.+....|....++.+.+.........+.+++|||-. .|+-|=...|
T Consensus 111 ----------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 111 ----------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ----------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 011124544455666543221224577899999975 5777665555
No 170
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.30 E-value=0.52 Score=46.68 Aligned_cols=94 Identities=11% Similarity=0.076 Sum_probs=58.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++-|++.++++.|++. +++.++|..+.. .+..|+...-+. ++ ...+.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~-i~-~~~~~------------------------- 159 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEF-VL-RAGPH------------------------- 159 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhce-eE-ecccC-------------------------
Confidence 5678999999999875 899999986643 245666321111 11 11100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCeeeeeC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADVGFAMG 262 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~vGiamg 262 (591)
.+ .+.+..+....++. ++...+.+++|||+ ..|+.+-+.||+-....
T Consensus 160 -~~--~KP~p~~~~~a~~~-~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 160 -GR--SKPFSDMYHLAAEK-LNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred -Cc--CCCcHHHHHHHHHH-cCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 01 12234445554444 45556778888999 59999999999765433
No 171
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=90.33 E-value=2.8 Score=42.25 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=39.0
Q ss_pred EEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH
Q psy8116 124 LCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK 168 (591)
Q Consensus 124 lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~ 168 (591)
=|++.-.+.+=|++.++|+.|+++|++++++|.....+...++.+
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 378888889999999999999999999999998887777755554
No 172
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.06 E-value=0.25 Score=42.05 Aligned_cols=49 Identities=20% Similarity=0.211 Sum_probs=35.8
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIA---TKCGILK 173 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~~ 173 (591)
|++...+.+-|++.++|+.|+++|++++++|.....+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 445557788899999999999999999999987755544444 5678753
No 173
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=88.68 E-value=7.2 Score=45.79 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=31.3
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q psy8116 133 VRPEVPDAIRKCQRA-GITVRMVTGDNINTARSIATKCG 170 (591)
Q Consensus 133 lr~~v~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g 170 (591)
+.+++.+++++|.+. +..|+++|||...+.......++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 567788899998865 78899999999999998876533
No 174
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=88.56 E-value=1 Score=45.62 Aligned_cols=40 Identities=13% Similarity=0.237 Sum_probs=37.6
Q ss_pred CC-CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 133 VR-PEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 133 lr-~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
+| |++.+++++|+++|+++.++|+.....+....+++|+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd 186 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD 186 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC
Confidence 45 99999999999999999999999999999999999995
No 175
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=85.58 E-value=2.6 Score=46.74 Aligned_cols=39 Identities=21% Similarity=0.493 Sum_probs=31.7
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHHcCC
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNI------------NTARSIATKCGI 171 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~------------~ta~~ia~~~gi 171 (591)
+-|+++++|+.|+++|++++++|.-.. ..+..+.+++|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999998554 345566777776
No 176
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=85.46 E-value=0.85 Score=40.43 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=29.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR 163 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~ 163 (591)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568889999999999999999999999887644
No 177
>PTZ00445 p36-lilke protein; Provisional
Probab=85.44 E-value=2.5 Score=40.79 Aligned_cols=115 Identities=16% Similarity=0.190 Sum_probs=68.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccc-hhhHH----HHhhhc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANG-DVQQH----LLDKVW 206 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~-~~~~~----~l~~~~ 206 (591)
.++|+.+..+++|+++||+|.++|=....+ +. .+.....+.|.++.+....... +...+ .-...|
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~---------~~-~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w 144 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKEL---------IP-SENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW 144 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhh---------cc-ccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc
Confidence 479999999999999999999999554433 11 1233345667766554322110 00000 000111
Q ss_pred Ccce-----EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe
Q psy8116 207 PRLR-----VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV 257 (591)
Q Consensus 207 ~~~~-----v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v 257 (591)
..-. -.....|+.|..=++.+++. .+...+.++++=|....+.+-++.|+
T Consensus 145 ~~p~~y~~~gl~KPdp~iK~yHle~ll~~-~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 145 QEPSDYRPLGLDAPMPLDKSYHLKQVCSD-FNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred CChhhhhhhcccCCCccchHHHHHHHHHH-cCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 1111 11234556665655667666 46667788888999999999888765
No 178
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=85.17 E-value=2.9 Score=46.09 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=61.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK-CGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
+++++.+. +++.|.+ +++|+-....+..+|++ +|+. ..+ |.++.. +.++... . .+
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VI---gTeLev---~~~G~~T--------G--~i 166 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVL---GTELEV---SKSGRAT--------G--FM 166 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEE---ecccEE---CcCCEEe--------e--ee
Confidence 66665554 4567754 99999999999999987 8983 222 111110 0000000 0 00
Q ss_pred EE--ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCeeeeeCC
Q psy8116 212 LA--RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGI 263 (591)
Q Consensus 212 ~~--r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vGiamg~ 263 (591)
-. .+.-+.|...++.. +......+ +.||+.||.|||+.|+.+++++.
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~----~g~~~~~~-aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKE----FGDALPDL-GLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred cCCCCCccHHHHHHHHHH----hCCCCceE-EEECCccHHHHHHhCCccEEeCC
Confidence 00 12345687777632 22222234 45999999999999999999984
No 179
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=84.89 E-value=2.1 Score=43.55 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=40.4
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecch
Q psy8116 134 RPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGK 184 (591)
Q Consensus 134 r~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~ 184 (591)
.|++.+++++|+++|+++.++|+.+...+..+.+.+|+... -..++.+|.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y-FDvII~~g~ 199 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY-FDIIICGGR 199 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc-ccEEEECCC
Confidence 38999999999999999999998888889999999999532 123444444
No 180
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=84.21 E-value=5.9 Score=39.26 Aligned_cols=139 Identities=18% Similarity=0.236 Sum_probs=70.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
.+|+++.+.++.|++.+|++.++|+--..-...+.++-|...++-.+ +-|--.+++ ++ .+.-
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~V-vSN~M~Fd~-----~g------------~l~g 151 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKV-VSNFMDFDE-----DG------------VLVG 151 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEE-EEE-EEE-T-----TS------------BEEE
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEE-EeeeEEECC-----cc------------eEee
Confidence 58999999999999999999999988888888888888876654222 222112211 00 0000
Q ss_pred EEe--cChhhHHHHHH---HHHHhhcCCCCcEEEEECCCCCCHHhhhcC-C--eeeeeC--CCcc----HHHHhcccccc
Q psy8116 212 LAR--SSPTDKYTLVK---GIIDSKVSDSREVVAVTGDGTNDGPALKKA-D--VGFAMG--IAGT----DVAKEASDIIL 277 (591)
Q Consensus 212 ~~r--~sp~~K~~~v~---~l~~~~~~~~~~~va~iGDg~ND~~mLk~A-~--vGiamg--~~~~----~~ak~aad~vl 277 (591)
|.. ..+-+|-.-+- ..-+. ++ .+..|+..||+.-|+.|-.-. + .-+.+| +... +.-+++=|+|+
T Consensus 152 F~~~lIH~~NKn~~~l~~~~~~~~-~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVl 229 (246)
T PF05822_consen 152 FKGPLIHTFNKNESALEDSPYFKQ-LK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVL 229 (246)
T ss_dssp E-SS---TT-HHHHHHTTHHHHHC-TT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEE
T ss_pred cCCCceEEeeCCcccccCchHHHH-hc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEE
Confidence 100 11223433221 01111 23 344555559999999998766 2 222222 1122 23467889999
Q ss_pred cCCChhHHHHHHH
Q psy8116 278 TDDNFSSIVKAVM 290 (591)
Q Consensus 278 ~~~~~~~i~~~i~ 290 (591)
.+|.--.++..|.
T Consensus 230 v~D~tm~v~~~il 242 (246)
T PF05822_consen 230 VDDQTMDVPNAIL 242 (246)
T ss_dssp ET--B-HHHHHHH
T ss_pred ECCCCchHHHHHH
Confidence 9877555555544
No 181
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=83.95 E-value=4.5 Score=38.21 Aligned_cols=104 Identities=21% Similarity=0.214 Sum_probs=58.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhc--Ccce
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVW--PRLR 210 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 210 (591)
+.+++.+++..++++|.+++|+|. +-||.. . ..++.++...- ......+...- -.-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~r--g---yf~~~~f~~~~-----~~m~~~l~~~gv~id~i 90 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGR--G---YFTEADFDKLH-----NKMLKILASQGVKIDGI 90 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccc--c---CccHHHHHHHH-----HHHHHHHHHcCCccceE
Confidence 578999999999999999999996 233421 1 12223332210 00111111111 0112
Q ss_pred EEEecChh-------hHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 211 VLARSSPT-------DKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 211 v~~r~sp~-------~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+|.-.|+ -|.-++...+++ +...-....+|||...|..+-..|+++
T Consensus 91 ~~Cph~p~~~c~cRKP~~gm~~~~~~~-~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 91 LYCPHHPEDNCDCRKPKPGMLLSALKE-YNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred EECCCCCCCCCcccCCChHHHHHHHHH-hCCCccceEEecCcHHHHHHHHHCCCC
Confidence 33443343 234444444444 345556777779999999999888876
No 182
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=83.64 E-value=11 Score=44.72 Aligned_cols=38 Identities=13% Similarity=0.248 Sum_probs=31.5
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q psy8116 133 VRPEVPDAIRKCQRA-GITVRMVTGDNINTARSIATKCG 170 (591)
Q Consensus 133 lr~~v~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g 170 (591)
+.+++.++++.|.+. +..|+++|||...+.......++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 457788899998876 78899999999999998876644
No 183
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=82.13 E-value=1 Score=41.84 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=38.5
Q ss_pred eccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy8116 128 GIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGI 171 (591)
Q Consensus 128 ~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 171 (591)
.+.=..||++.+.++.|.+. ..+++.|......|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 34446999999999999987 99999999999999999998886
No 184
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=80.92 E-value=7 Score=37.85 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=63.3
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcc
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRL 209 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 209 (591)
.-++.+++.++++.+++. .++.++|.-....+.....++||.+.-+..++.+...
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g------------------------ 151 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVG------------------------ 151 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccc------------------------
Confidence 347888999999999988 9999999988888899999999743222222111100
Q ss_pred eEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee
Q psy8116 210 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG 258 (591)
Q Consensus 210 ~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG 258 (591)
...|.. ++-+.+++. ++...+.++++||+. ||+..-+++|.-
T Consensus 152 ----~~KP~~--~~f~~~~~~-~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 152 ----VAKPDP--EIFEYALEK-LGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred ----cCCCCc--HHHHHHHHH-cCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 112222 233344444 455577888999975 675666777753
No 185
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=80.91 E-value=2.2 Score=42.04 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=31.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINT---ARSIATKCGIL 172 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 172 (591)
++.-|++.+.++.+++.|++|+++|||+... +..=.++.|+.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~ 158 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFP 158 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCC
Confidence 4566889999999999999999999998552 22334456653
No 186
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=79.89 E-value=14 Score=44.20 Aligned_cols=45 Identities=7% Similarity=0.056 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHhhcCCCCcEEEEECCCCC-C-HHhhhcCCeeeeeC
Q psy8116 218 TDKYTLVKGIIDSKVSDSREVVAVTGDGTN-D-GPALKKADVGFAMG 262 (591)
Q Consensus 218 ~~K~~~v~~l~~~~~~~~~~~va~iGDg~N-D-~~mLk~A~vGiamg 262 (591)
..|++.++.|..+......+++.++||+-| | ..|+.--+-+|-+.
T Consensus 955 ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~ 1001 (1050)
T TIGR02468 955 ASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILK 1001 (1050)
T ss_pred CCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEe
Confidence 389999999998866677777787899999 9 55777777787764
No 187
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=77.09 E-value=11 Score=38.03 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=27.5
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHH
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNIN 160 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ 160 (591)
+.|.-|++.+..+.+++.|++|+++|||...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 4567789999999999999999999999854
No 188
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=76.77 E-value=5.5 Score=40.39 Aligned_cols=48 Identities=21% Similarity=0.333 Sum_probs=36.0
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH---HHHHcCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARS---IATKCGIL 172 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~---ia~~~gi~ 172 (591)
|++.-.+.+-|++.++|++|+++|++++++||+...+... -.+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3444456778889999999999999999999976544443 34567774
No 189
>KOG3040|consensus
Probab=75.69 E-value=6.1 Score=37.82 Aligned_cols=52 Identities=21% Similarity=0.341 Sum_probs=43.3
Q ss_pred cEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH---HcCCC
Q psy8116 121 LTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIAT---KCGIL 172 (591)
Q Consensus 121 l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~---~~gi~ 172 (591)
+.+-|++.++|..-|++.|+++.|++++.+|..+|.-..+.-+.+.. +||+.
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 34679999999999999999999999999999999877766666554 46763
No 190
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=75.39 E-value=6.7 Score=36.52 Aligned_cols=94 Identities=26% Similarity=0.333 Sum_probs=56.9
Q ss_pred cCCCCCch-HHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhh
Q psy8116 130 EDPVRPEV-PDAIRKCQRAGITVRMVTGDNIN----TARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDK 204 (591)
Q Consensus 130 ~d~lr~~v-~~~I~~l~~aGI~v~~~TGd~~~----ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~ 204 (591)
++.+.+++ ++.|.--++.|=.+..+|||... ++..+|+...|.. ...+...|..-
T Consensus 111 ~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~--m~pv~f~Gdk~------------------ 170 (237)
T COG3700 111 EFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITN--MNPVIFAGDKP------------------ 170 (237)
T ss_pred cccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCC--CcceeeccCCC------------------
Confidence 44555555 56666666779999999999754 4455666666632 22233333210
Q ss_pred hcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCe-eeee
Q psy8116 205 VWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADV-GFAM 261 (591)
Q Consensus 205 ~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~v-Giam 261 (591)
+...-+|-..++ +++-.+-. ||+-||+.+-|.|++ ||-+
T Consensus 171 ---------k~~qy~Kt~~i~--------~~~~~IhY-GDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 171 ---------KPGQYTKTQWIQ--------DKNIRIHY-GDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred ---------CcccccccHHHH--------hcCceEEe-cCCchhhhHHHhcCccceeE
Confidence 111224544433 34555666 999999999999985 5543
No 191
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=73.87 E-value=3.5 Score=32.61 Aligned_cols=47 Identities=17% Similarity=0.277 Sum_probs=31.4
Q ss_pred cCCCCcEEEEECCC-CCCHHhhhcCCee-eee--CCCccHHH---Hhccccccc
Q psy8116 232 VSDSREVVAVTGDG-TNDGPALKKADVG-FAM--GIAGTDVA---KEASDIILT 278 (591)
Q Consensus 232 ~~~~~~~va~iGDg-~ND~~mLk~A~vG-iam--g~~~~~~a---k~aad~vl~ 278 (591)
+......++||||. ..|+.+-+++++- +.+ |....+.. ...+|+|+.
T Consensus 17 ~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 17 LGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred cCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 35556678888999 9999999999953 333 32222232 247788776
No 192
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=72.29 E-value=6.8 Score=36.29 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=28.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
++.|++.++++ ++.++|.-+........++.|+.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~ 123 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP 123 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH
Confidence 58899999998 37889999888888888888884
No 193
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=70.77 E-value=22 Score=33.26 Aligned_cols=97 Identities=16% Similarity=0.177 Sum_probs=52.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEc-CCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVT-GDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~T-Gd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+-|+++++|+.|++.|+++.++| -+.+..|+.+.+.+++...+... ... .+.-
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~-----~~~--------------------~~~F 99 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDG-----VPL--------------------IEYF 99 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-----------------------------------CCE
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCcccccc-----ccc--------------------hhhc
Confidence 578999999999999999999999 57789999999999995111110 000 0111
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhc
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKK 254 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~ 254 (591)
-+...-|..|..-.+.+.+.......+ +++.=|-.......+.
T Consensus 100 ~~~eI~~gsK~~Hf~~i~~~tgI~y~e-MlFFDDe~~N~~~v~~ 142 (169)
T PF12689_consen 100 DYLEIYPGSKTTHFRRIHRKTGIPYEE-MLFFDDESRNIEVVSK 142 (169)
T ss_dssp CEEEESSS-HHHHHHHHHHHH---GGG-EEEEES-HHHHHHHHT
T ss_pred chhheecCchHHHHHHHHHhcCCChhH-EEEecCchhcceeeEe
Confidence 123345667888888877765555555 4444554444444443
No 194
>PLN02645 phosphoglycolate phosphatase
Probab=69.62 E-value=25 Score=36.29 Aligned_cols=66 Identities=9% Similarity=0.118 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee---eeeCCCccHHHH-----hcccccccCCChhHHHHH
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG---FAMGIAGTDVAK-----EASDIILTDDNFSSIVKA 288 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG---iamg~~~~~~ak-----~aad~vl~~~~~~~i~~~ 288 (591)
+..+++.+++. +....+.++||||.. +|+.+-+.|++. +.-|....+... ..+|+++. ++..+.++
T Consensus 232 ~p~~~~~a~~~-~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~--~~~~l~~~ 306 (311)
T PLN02645 232 STFMMDYLANK-FGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTS--KISDFLTL 306 (311)
T ss_pred hHHHHHHHHHH-cCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEEC--CHHHHHHH
Confidence 34455555555 456677888999997 999999999953 333422222222 24677665 56555543
No 195
>PF15603 Imm45: Immunity protein 45
Probab=68.85 E-value=18 Score=29.41 Aligned_cols=37 Identities=8% Similarity=0.073 Sum_probs=30.9
Q ss_pred ccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEE
Q psy8116 50 AFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTI 86 (591)
Q Consensus 50 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l 86 (591)
-..|.+.++..|+++.+++.+++++.+.++.+|+++.
T Consensus 44 i~~We~P~e~~~it~~e~q~II~aI~~~~~~~~~~v~ 80 (82)
T PF15603_consen 44 IKNWEPPHENEPITIAERQKIIEAIEKYFSERGMTVD 80 (82)
T ss_pred cccccCCCCCcccCHHHHHHHHHHHHHHHhcCceEEE
Confidence 3456677778899999999999999999999998764
No 196
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=66.29 E-value=35 Score=35.72 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=35.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-C
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKC-G 170 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~-g 170 (591)
..|++++.++.|+++|+++.++|+.....+..+.+.+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 3689999999999999999999999999999999986 6
No 197
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=64.21 E-value=14 Score=36.35 Aligned_cols=48 Identities=15% Similarity=0.175 Sum_probs=36.9
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHH-cCCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVT---GDNINTARSIATK-CGIL 172 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~-~gi~ 172 (591)
|++--.+.+-+++.++|+.++++|++++++| |+..........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4444456677899999999999999999998 6776666655555 6763
No 198
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=62.58 E-value=16 Score=36.54 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=66.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH---HcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCc
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIAT---KCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPR 208 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~---~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (591)
.+.+++++.|+.+++.|++|.-+|.+.+.......+ ++||.-.+.. ...+.. ............
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~---~~~~~~----------~~~~~~~~~~~~ 147 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSS---FPEDGI----------ISFPVFDSALSR 147 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccc---cccCcc----------eecccccCCCCC
Confidence 366799999999999999999999999766655444 4677322111 000000 000000000011
Q ss_pred ceEEE----ecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHH----hhhcCCee
Q psy8116 209 LRVLA----RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGP----ALKKADVG 258 (591)
Q Consensus 209 ~~v~~----r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~----mLk~A~vG 258 (591)
..++. -++..+|+.++..+.++ .......|.+|-|....+. +++.+++.
T Consensus 148 ~~~~~~GIlft~~~~KG~~L~~fL~~-~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~ 204 (252)
T PF11019_consen 148 APSFYDGILFTGGQDKGEVLKYFLDK-INQSPKKIIFIDDNKENLKSVEKACKKSGID 204 (252)
T ss_pred CceeecCeEEeCCCccHHHHHHHHHH-cCCCCCeEEEEeCCHHHHHHHHHHHhhCCCc
Confidence 11111 13457899999999888 4556667777799887664 44555544
No 199
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=61.48 E-value=12 Score=37.08 Aligned_cols=97 Identities=7% Similarity=0.079 Sum_probs=51.4
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEE
Q psy8116 134 RPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLA 213 (591)
Q Consensus 134 r~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~ 213 (591)
-++..++++.+++.|+++ ++|+.....+.......|. | .+...+ ...-.+.....
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~-----------g-~~~~~i------------~~~g~~~~~~g 194 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGA-----------G-YYAELI------------KQLGGKVIYSG 194 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecc-----------c-HHHHHH------------HHhCCcEecCC
Confidence 468888999888889987 7787655444322111111 1 111110 00001111111
Q ss_pred ecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCeee
Q psy8116 214 RSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADVGF 259 (591)
Q Consensus 214 r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~vGi 259 (591)
+.+ ..+.+.+++.+.....+.++|+||+ .+|+.+-+.|++-.
T Consensus 195 KP~----~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 195 KPY----PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred CCC----HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 222 2344444444222335678899999 59999999988753
No 200
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.20 E-value=83 Score=32.32 Aligned_cols=67 Identities=13% Similarity=0.145 Sum_probs=39.4
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCH---HhhhcCCeeeeeCCCcc---HHHHhcccccccCCC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDG---PALKKADVGFAMGIAGT---DVAKEASDIILTDDN 281 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~---~mLk~A~vGiamg~~~~---~~ak~aad~vl~~~~ 281 (591)
|.-+||.. +++.|..+...-.|..|+++|-| .-=. .+|..+|..+.+-+..+ ..+...||+++..-.
T Consensus 138 ~~PcTp~a---ii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 138 LTPCTPSG---CLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVG 211 (301)
T ss_pred CCCCcHHH---HHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecC
Confidence 33455544 34433333335679999999997 4333 35667777776553322 234567899887433
No 201
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=51.05 E-value=57 Score=28.70 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=20.7
Q ss_pred CCCcEEEEECCCCC--CHHhhhcCCeeeeeC
Q psy8116 234 DSREVVAVTGDGTN--DGPALKKADVGFAMG 262 (591)
Q Consensus 234 ~~~~~va~iGDg~N--D~~mLk~A~vGiamg 262 (591)
.+-+.+...|-|.| |..++++.|+-++-.
T Consensus 59 ~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 59 PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 34567778899998 888999888888743
No 202
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=50.69 E-value=27 Score=35.33 Aligned_cols=35 Identities=14% Similarity=0.104 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee
Q psy8116 223 LVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG 258 (591)
Q Consensus 223 ~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG 258 (591)
+++.+++. ++...+.++||||.. .|+.+-++|++-
T Consensus 207 ~~~~~~~~-~~~~~~~~lmIGD~~~tDI~~A~~aGi~ 242 (279)
T TIGR01452 207 MFECITEN-FSIDPARTLMVGDRLETDILFGHRCGMT 242 (279)
T ss_pred HHHHHHHH-hCCChhhEEEECCChHHHHHHHHHcCCc
Confidence 33334443 455677889999995 999999999964
No 203
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=49.71 E-value=26 Score=32.21 Aligned_cols=41 Identities=15% Similarity=0.151 Sum_probs=36.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGIL 172 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 172 (591)
=.+||++.+.++.|.+. +++.++|......|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 35899999999999955 999999999999999999999873
No 204
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=49.28 E-value=1.1e+02 Score=30.93 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=24.8
Q ss_pred CCchHHHHHHHHHcCC-EEEEEcCCCHHH
Q psy8116 134 RPEVPDAIRKCQRAGI-TVRMVTGDNINT 161 (591)
Q Consensus 134 r~~v~~~I~~l~~aGI-~v~~~TGd~~~t 161 (591)
+|-..-.++.+.++|| .+.++||++...
T Consensus 35 KP~IqYiVeEa~~aGIe~i~iVTgr~K~~ 63 (291)
T COG1210 35 KPLIQYIVEEAVAAGIEEILIVTGRGKRA 63 (291)
T ss_pred chhHHHHHHHHHHcCCCEEEEEecCCcch
Confidence 7788899999999999 699999998764
No 205
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=49.10 E-value=51 Score=26.47 Aligned_cols=55 Identities=20% Similarity=0.253 Sum_probs=40.7
Q ss_pred eeccCCCCCchHHHHHHHHHcCCEEEE-EcCCCHHHHHHHHHHcCCCCCCCceEEecchh
Q psy8116 127 VGIEDPVRPEVPDAIRKCQRAGITVRM-VTGDNINTARSIATKCGILKPGDDFLILEGKE 185 (591)
Q Consensus 127 i~i~d~lr~~v~~~I~~l~~aGI~v~~-~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~ 185 (591)
+...+...+.+.+..+.|+++|+++.+ ..+++.......|.+.|+ ...+++...+
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~----~~~iiig~~e 62 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKI----PYILVVGDKE 62 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCC----CEEEEECcch
Confidence 444556677888888999999999988 577777788888888887 3444554443
No 206
>KOG3109|consensus
Probab=46.06 E-value=1.4e+02 Score=29.22 Aligned_cols=107 Identities=15% Similarity=0.088 Sum_probs=69.5
Q ss_pred EEeeccCCCCCch--HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHH
Q psy8116 125 CVVGIEDPVRPEV--PDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLL 202 (591)
Q Consensus 125 G~i~i~d~lr~~v--~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l 202 (591)
|-+..+| ++|+- ++.+-.|+..+ -|+.|.-...-|..+.+++||.+--+..++.+-...
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np---------------- 152 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNP---------------- 152 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCC----------------
Confidence 4455566 66665 56666666554 899999999999999999999653333333321110
Q ss_pred hhhcCcceEEEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCCHHhhhcCCee
Q psy8116 203 DKVWPRLRVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVG 258 (591)
Q Consensus 203 ~~~~~~~~v~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND~~mLk~A~vG 258 (591)
.+..++|..+|+.=-.+.+. ........+.++-|+.+.+..-+..|..
T Consensus 153 ----~~~~~vcKP~~~afE~a~k~----agi~~p~~t~FfDDS~~NI~~ak~vGl~ 200 (244)
T KOG3109|consen 153 ----IEKTVVCKPSEEAFEKAMKV----AGIDSPRNTYFFDDSERNIQTAKEVGLK 200 (244)
T ss_pred ----CCCceeecCCHHHHHHHHHH----hCCCCcCceEEEcCchhhHHHHHhccce
Confidence 12357788777643333333 1345467778889999999888877743
No 207
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=44.98 E-value=56 Score=32.13 Aligned_cols=39 Identities=13% Similarity=0.127 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCC-CCHHhhhcCCee
Q psy8116 220 KYTLVKGIIDSKVSDSREVVAVTGDGT-NDGPALKKADVG 258 (591)
Q Consensus 220 K~~~v~~l~~~~~~~~~~~va~iGDg~-ND~~mLk~A~vG 258 (591)
+..+.+.+++.......+.++||||.. +|+.+-+++++-
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~ 229 (236)
T TIGR01460 190 SPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFD 229 (236)
T ss_pred CHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCc
Confidence 344555555553334455568999998 899999998864
No 208
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=44.47 E-value=55 Score=26.70 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=42.2
Q ss_pred EEeeccC---CCCCchHHHHHHHHHcCCEEEEE-cCCCHHHHHHHHHHcCCCCCCCceEEecchhh
Q psy8116 125 CVVGIED---PVRPEVPDAIRKCQRAGITVRMV-TGDNINTARSIATKCGILKPGDDFLILEGKEF 186 (591)
Q Consensus 125 G~i~i~d---~lr~~v~~~I~~l~~aGI~v~~~-TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~ 186 (591)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+ ...+++...+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~----p~~iiiG~~e~ 64 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGI----PFIIIIGEKEL 64 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTE----SEEEEEEHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCC----eEEEEECchhH
Confidence 3455555 56667788899999999998888 67777777888999988 34455544444
No 209
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=43.15 E-value=3.1e+02 Score=26.31 Aligned_cols=14 Identities=7% Similarity=0.048 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHH
Q psy8116 488 WLWCLFFGIGTLLW 501 (591)
Q Consensus 488 w~~~l~~~~~~ll~ 501 (591)
++..+++|++.+..
T Consensus 180 ~~~~iiig~i~~~~ 193 (206)
T PF06570_consen 180 PWVYIIIGVIAFAL 193 (206)
T ss_pred HHHHHHHHHHHHHH
Confidence 34445555555443
No 210
>KOG2914|consensus
Probab=42.67 E-value=57 Score=31.92 Aligned_cols=99 Identities=15% Similarity=0.144 Sum_probs=59.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC-CCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcce
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCG-ILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLR 210 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g-i~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 210 (591)
.+-||+.+.++.|+..|+.+.++|+.+..++..-....+ +...-...+..+|.++...
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~g--------------------- 150 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNG--------------------- 150 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCC---------------------
Confidence 456799999999999999999999997766664444433 3221111122233322110
Q ss_pred EEEecChhhHHHHHHHHHHhhcCCCC-cEEEEECCCCCCHHhhhcCCeee
Q psy8116 211 VLARSSPTDKYTLVKGIIDSKVSDSR-EVVAVTGDGTNDGPALKKADVGF 259 (591)
Q Consensus 211 v~~r~sp~~K~~~v~~l~~~~~~~~~-~~va~iGDg~ND~~mLk~A~vGi 259 (591)
...|+-=....+. +.... +.+++..|..+=+.|-++|+.-+
T Consensus 151 ---KP~Pdi~l~A~~~-----l~~~~~~k~lVfeds~~Gv~aa~aagm~v 192 (222)
T KOG2914|consen 151 ---KPDPDIYLKAAKR-----LGVPPPSKCLVFEDSPVGVQAAKAAGMQV 192 (222)
T ss_pred ---CCCchHHHHHHHh-----cCCCCccceEEECCCHHHHHHHHhcCCeE
Confidence 1223222223333 44444 67777788888888888888544
No 211
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=42.56 E-value=93 Score=31.86 Aligned_cols=79 Identities=22% Similarity=0.243 Sum_probs=49.6
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEecChhhHHHHHHHHH
Q psy8116 149 ITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLARSSPTDKYTLVKGII 228 (591)
Q Consensus 149 I~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~sp~~K~~~v~~l~ 228 (591)
+..+++-|....+...+|+..++. ++||-.- ...|.|-..=+-.+.
T Consensus 100 ~D~I~~R~~~~~~ve~lA~~s~VP-------ViNgLtD---------------------------~~HP~Q~LADl~Ti~ 145 (310)
T COG0078 100 VDAIMIRGFSHETLEELAKYSGVP-------VINGLTD---------------------------EFHPCQALADLMTIK 145 (310)
T ss_pred hheEEEecccHHHHHHHHHhCCCc-------eEccccc---------------------------ccCcHHHHHHHHHHH
Confidence 455666677777777777776663 4444221 224666666666777
Q ss_pred HhhcCCCCcEEEEECCCCCCH--HhhhcCCeeeee
Q psy8116 229 DSKVSDSREVVAVTGDGTNDG--PALKKADVGFAM 261 (591)
Q Consensus 229 ~~~~~~~~~~va~iGDg~ND~--~mLk~A~vGiam 261 (591)
|+.....+..++++|||.|=+ -|+-.|-.|+-+
T Consensus 146 E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 146 EHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred HhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence 775556889999999995522 344555555544
No 212
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.34 E-value=1.5e+02 Score=30.12 Aligned_cols=65 Identities=14% Similarity=0.213 Sum_probs=38.0
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECC-CCCCHH---hhhcCCeeeeeCCCccH---HHHhcccccccC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGD-GTNDGP---ALKKADVGFAMGIAGTD---VAKEASDIILTD 279 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGD-g~ND~~---mLk~A~vGiamg~~~~~---~ak~aad~vl~~ 279 (591)
|.-+||.. +++.|..+.....|..++++|- |.-=.| +|.+++.-+.+-...+. .....||+++..
T Consensus 137 ~~PcTp~a---vi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 137 MIPCTPAG---IMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcCCCHHH---HHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 34455544 4444433334567899999999 444444 56666766655333222 234678998863
No 213
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.02 E-value=1.3e+02 Score=30.60 Aligned_cols=64 Identities=13% Similarity=0.173 Sum_probs=35.5
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCC----HHhhhcCCeeeeeCCCccH---HHHhcccccccC
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND----GPALKKADVGFAMGIAGTD---VAKEASDIILTD 279 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND----~~mLk~A~vGiamg~~~~~---~ak~aad~vl~~ 279 (591)
.-+||.. +++.|..+...-.|..++++|-|..= +.||...+.-+.+....+. ..-..||+++..
T Consensus 136 ~PcTp~a---vi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 136 VASTPYG---IMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred CCCCHHH---HHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 3445544 33333333234578899999998762 3355555555544433332 234678888763
No 214
>KOG3085|consensus
Probab=41.03 E-value=96 Score=30.70 Aligned_cols=99 Identities=12% Similarity=0.132 Sum_probs=58.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceE
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRV 211 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 211 (591)
++-++..+++++||++|..+.++|-=.. ....+-..+|+...-+ +++.++..
T Consensus 113 ~~~~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~fD-~vv~S~e~-------------------------- 164 (237)
T KOG3085|consen 113 KYLDGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAYFD-FVVESCEV-------------------------- 164 (237)
T ss_pred eeccHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHhhh-hhhhhhhh--------------------------
Confidence 4556677999999999988888775332 2336666677632111 11111100
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCC-CCCHHhhhcCCe-eeeeC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDG-TNDGPALKKADV-GFAMG 262 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg-~ND~~mLk~A~v-Giamg 262 (591)
- -..|+- ++-+..++. ++.+.+.+++|||. .||...-+.+|. ++-+.
T Consensus 165 g-~~KPDp--~If~~al~~-l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 165 G-LEKPDP--RIFQLALER-LGVKPEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred c-cCCCCh--HHHHHHHHH-hCCChHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 0 011221 233334444 46667888889995 799999999884 55555
No 215
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=36.85 E-value=1.7e+02 Score=29.01 Aligned_cols=42 Identities=7% Similarity=0.103 Sum_probs=32.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHH----HHHHHHHcCCCC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINT----ARSIATKCGILK 173 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~t----a~~ia~~~gi~~ 173 (591)
.+-||+.|.++...+.|.+|..+|.|.... ...=.++.|+..
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~ 167 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQ 167 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccc
Confidence 356899999999999999999999998766 333445566643
No 216
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=35.16 E-value=64 Score=27.83 Aligned_cols=40 Identities=15% Similarity=0.219 Sum_probs=30.0
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy8116 130 EDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGI 171 (591)
Q Consensus 130 ~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 171 (591)
...=.+++.++++.+++.|++++.+|++.. ....+.+-|.
T Consensus 52 ~SG~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 52 YSGNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 344567899999999999999999998763 3445554443
No 217
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.07 E-value=1.8e+02 Score=29.75 Aligned_cols=65 Identities=9% Similarity=0.130 Sum_probs=35.9
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCC---HH-hhh------cCCeeeeeCCCc-cHHHHhcccccccC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND---GP-ALK------KADVGFAMGIAG-TDVAKEASDIILTD 279 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND---~~-mLk------~A~vGiamg~~~-~~~ak~aad~vl~~ 279 (591)
|.-+||.. +++.+..+...-.|..|+++|-|..= .. ||. .|.|-++..... ....-..||+++..
T Consensus 138 ~~PcTp~a---il~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 138 FVSCTPYG---ILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred cCCCCHHH---HHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 34455554 44444333234578999999998763 22 433 355555544221 12345688988873
No 218
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=34.83 E-value=80 Score=28.35 Aligned_cols=42 Identities=21% Similarity=0.190 Sum_probs=37.4
Q ss_pred hhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcC
Q psy8116 115 EYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTG 156 (591)
Q Consensus 115 ~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TG 156 (591)
.++.++-.-++++|+.+.+....-...+.|+++|++|+-+--
T Consensus 10 ~~iL~~~K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP 51 (140)
T COG1832 10 AEILKSAKTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNP 51 (140)
T ss_pred HHHHHhCceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCc
Confidence 456677788999999999999999999999999999998754
No 219
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=33.92 E-value=67 Score=27.81 Aligned_cols=39 Identities=21% Similarity=0.371 Sum_probs=30.2
Q ss_pred CCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCC
Q psy8116 133 VRPEVPDAIRKCQRAGI-TVRMVTGDNINTARSIATKCGI 171 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi 171 (591)
..+.+++.+++|.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 66788999999999998 5899999999999999999887
No 220
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=32.29 E-value=37 Score=32.11 Aligned_cols=29 Identities=21% Similarity=0.377 Sum_probs=23.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHH
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNIN 160 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ 160 (591)
++-|++.+++++|.+.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56789999999999999999999988654
No 221
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=31.70 E-value=43 Score=30.83 Aligned_cols=24 Identities=33% Similarity=0.677 Sum_probs=21.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcC
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTG 156 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TG 156 (591)
+.++++++|+++.+.|.+++|+|.
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC
Confidence 556899999999999999999995
No 222
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.10 E-value=2.1e+02 Score=29.21 Aligned_cols=64 Identities=13% Similarity=0.184 Sum_probs=34.5
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCC----HHhhhcCCeeeeeCCCccH---HHHhcccccccC
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND----GPALKKADVGFAMGIAGTD---VAKEASDIILTD 279 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND----~~mLk~A~vGiamg~~~~~---~ak~aad~vl~~ 279 (591)
.-+||.. +++.+..+.....|..|+++|-|..= +.||...+.-+.+....+. ..-..||+++..
T Consensus 137 ~PcTp~a---vi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 137 VPCTPAG---IIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVA 207 (284)
T ss_pred CCCCHHH---HHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 3444443 34433333335678899999998762 2355544444443333332 234578888763
No 223
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=30.88 E-value=49 Score=30.70 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=35.8
Q ss_pred cCcEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Q psy8116 119 NNLTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIA 166 (591)
Q Consensus 119 ~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia 166 (591)
.+=.++|+-..- =.+.+.++++++++.|++++.+||++--....++
T Consensus 109 ~GDvLigISTSG--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 109 PGDVLIGISTSG--NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CCCEEEEEeCCC--CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 344677765543 4578899999999999999999999876666555
No 224
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.27 E-value=2.8e+02 Score=28.44 Aligned_cols=64 Identities=13% Similarity=0.065 Sum_probs=37.2
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCC-CH---HhhhcCCeeeeeCCCc---cHHHHhcccccccC
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN-DG---PALKKADVGFAMGIAG---TDVAKEASDIILTD 279 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~N-D~---~mLk~A~vGiamg~~~---~~~ak~aad~vl~~ 279 (591)
.-+||.. +++.|..+.....|..|+++|-+.. =. .+|.+++..+.+-++. .+.+...||+++..
T Consensus 138 ~PcTp~a---i~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 138 VPCTPLG---CMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred cCCCHHH---HHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 3445543 3443333333567999999995444 33 3566777777665322 23345678998863
No 225
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.86 E-value=2.4e+02 Score=28.64 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=36.7
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCC----HHhhhcCCeeeeeCCCccH---HHHhcccccccC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND----GPALKKADVGFAMGIAGTD---VAKEASDIILTD 279 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND----~~mLk~A~vGiamg~~~~~---~ak~aad~vl~~ 279 (591)
|.-+||..=.++++ .+...-.|..++++|-|..= +.||...+.-+.+....+. ..-..||+++..
T Consensus 137 ~~PcTp~av~~lL~---~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 137 FLPCTPNSVITLIK---SLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CcCCCHHHHHHHHH---HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 34455544333333 33234578899999998762 3466656655555433332 223568888763
No 226
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.49 E-value=2.4e+02 Score=28.75 Aligned_cols=58 Identities=12% Similarity=0.138 Sum_probs=32.1
Q ss_pred HHHHHHHHhhcCCCCcEEEEECCCCCC----HHhhhcCCeeeeeCCCccH---HHHhcccccccC
Q psy8116 222 TLVKGIIDSKVSDSREVVAVTGDGTND----GPALKKADVGFAMGIAGTD---VAKEASDIILTD 279 (591)
Q Consensus 222 ~~v~~l~~~~~~~~~~~va~iGDg~ND----~~mLk~A~vGiamg~~~~~---~ak~aad~vl~~ 279 (591)
.+++.+..+.....|..++++|-|..= +.||...+.-+.+....+. ..-..||+++..
T Consensus 143 avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 143 GVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAA 207 (282)
T ss_pred HHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 344444333345678899999998762 3456544444443333332 223568888763
No 227
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=29.13 E-value=69 Score=27.91 Aligned_cols=81 Identities=14% Similarity=0.156 Sum_probs=54.2
Q ss_pred HHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCC-E-EEE
Q psy8116 76 EPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGI-T-VRM 153 (591)
Q Consensus 76 ~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI-~-v~~ 153 (591)
.-+...|++|+.++-. .+.++ -.+.-.+.+-.++++-+......+.+++.++.|+++|. + .++
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e~--------------~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~ 85 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPEE--------------IVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVV 85 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHHH--------------HHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEE
Confidence 3477899999988733 11111 01122245667788877778888889999999999976 3 355
Q ss_pred EcCCCHHHHHHHHHHcCC
Q psy8116 154 VTGDNINTARSIATKCGI 171 (591)
Q Consensus 154 ~TGd~~~ta~~ia~~~gi 171 (591)
+-|.....-.+-.++.|+
T Consensus 86 ~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 86 GGGIIPPEDYELLKEMGV 103 (122)
T ss_pred EECCCCHHHHHHHHHCCC
Confidence 666665555666778897
No 228
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=29.13 E-value=87 Score=25.34 Aligned_cols=50 Identities=16% Similarity=0.096 Sum_probs=34.0
Q ss_pred CCCchHHHHHHHHHcCCEEEE-EcCCCHHHHHHHHHHcCCCCCCCceEEecchhh
Q psy8116 133 VRPEVPDAIRKCQRAGITVRM-VTGDNINTARSIATKCGILKPGDDFLILEGKEF 186 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~-~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~ 186 (591)
..+.+.+..+.|+++|+++.+ ..+++...-...|.+.|. ...+++...++
T Consensus 16 ~~~~a~~la~~Lr~~g~~v~~d~~~~~l~k~i~~a~~~g~----~~~iiiG~~e~ 66 (94)
T cd00861 16 QQELAEKLYAELQAAGVDVLLDDRNERPGVKFADADLIGI----PYRIVVGKKSA 66 (94)
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCcccchhHHHhcCC----CEEEEECCchh
Confidence 344566677888999999988 456677777778888887 34444444443
No 229
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=29.09 E-value=1.2e+02 Score=24.30 Aligned_cols=40 Identities=18% Similarity=0.109 Sum_probs=30.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEE-cCCCHHHHHHHHHHcCC
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMV-TGDNINTARSIATKCGI 171 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~-TGd~~~ta~~ia~~~gi 171 (591)
...+.+.+..+.|+++|+++.+- ++++.......|.+.|.
T Consensus 15 ~~~~~a~~~~~~Lr~~g~~v~~~~~~~~~~k~~~~a~~~g~ 55 (94)
T cd00738 15 EAREYAQKLLNALLANGIRVLYDDRERKIGKKFREADLRGV 55 (94)
T ss_pred HHHHHHHHHHHHHHHCCCEEEecCCCcCHhHHHHHHHhCCC
Confidence 34556667778899999999884 56777777788888887
No 230
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.89 E-value=3.4e+02 Score=27.63 Aligned_cols=65 Identities=14% Similarity=0.133 Sum_probs=35.8
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCC----HHhhhcCCeeeeeCCCccH---HHHhcccccccC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND----GPALKKADVGFAMGIAGTD---VAKEASDIILTD 279 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND----~~mLk~A~vGiamg~~~~~---~ak~aad~vl~~ 279 (591)
+.-+||.. +++.+..+...-.|..++++|-|..= +.||...+.-+.+....+. ..-..||+++..
T Consensus 138 ~~PcTp~a---vi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsA 209 (284)
T PRK14177 138 YLPCTPYG---MVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGA 209 (284)
T ss_pred CCCCCHHH---HHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 34455543 44433333345678899999988662 2355554544544433332 234678887763
No 231
>KOG2882|consensus
Probab=28.54 E-value=91 Score=31.82 Aligned_cols=47 Identities=19% Similarity=0.307 Sum_probs=40.4
Q ss_pred EEeeccCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATK---CGI 171 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~---~gi 171 (591)
|++-..+.+=|+++++++.|+++|-++.++|.....+-+..+++ +|+
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGF 80 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCc
Confidence 77788889999999999999999999999999887777776654 566
No 232
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=28.00 E-value=1.7e+02 Score=22.88 Aligned_cols=45 Identities=18% Similarity=0.274 Sum_probs=33.5
Q ss_pred eeccCCCCCchHHHHHHHHHcCCEEEEE-cCCCHHHHHHHHHHcCC
Q psy8116 127 VGIEDPVRPEVPDAIRKCQRAGITVRMV-TGDNINTARSIATKCGI 171 (591)
Q Consensus 127 i~i~d~lr~~v~~~I~~l~~aGI~v~~~-TGd~~~ta~~ia~~~gi 171 (591)
+...+...+.+.+..+.|+++|+++.+. .+++.......|.+.|+
T Consensus 7 ~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~ 52 (91)
T cd00859 7 VPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGA 52 (91)
T ss_pred EEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCC
Confidence 3344556667788889999999998884 44577777788888776
No 233
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=27.77 E-value=46 Score=28.78 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=26.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRMVTGDNINTAR 163 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~ 163 (591)
..-.+++.++++.+++.|.+++.+|+.......
T Consensus 56 sG~t~e~~~~~~~a~~~g~~vi~iT~~~~s~la 88 (126)
T cd05008 56 SGETADTLAALRLAKEKGAKTVAITNVVGSTLA 88 (126)
T ss_pred CcCCHHHHHHHHHHHHcCCeEEEEECCCCChHH
Confidence 345567999999999999999999998654433
No 234
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=27.12 E-value=41 Score=29.20 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=27.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI 165 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~i 165 (591)
.-.+++.++++.+++.|++++.+|+.+.......
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 91 (128)
T cd05014 58 GETDELLNLLPHLKRRGAPIIAITGNPNSTLAKL 91 (128)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhh
Confidence 3567899999999999999999999765544433
No 235
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.78 E-value=3.6e+02 Score=27.53 Aligned_cols=64 Identities=19% Similarity=0.232 Sum_probs=34.1
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCC----HHhhhcCCeeeeeCCCccH---HHHhccccccc
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND----GPALKKADVGFAMGIAGTD---VAKEASDIILT 278 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND----~~mLk~A~vGiamg~~~~~---~ak~aad~vl~ 278 (591)
|.-+||..=.++++. +.....|..|+++|-|..= +.||...+--+.+....+. ..-..||+++.
T Consensus 137 ~~PcTp~av~~lL~~---~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~ 207 (284)
T PRK14190 137 FLPCTPHGILELLKE---YNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIV 207 (284)
T ss_pred CCCCCHHHHHHHHHH---cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEE
Confidence 344555444333333 2234578899999988662 2355444433333323332 23467888876
No 236
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=26.65 E-value=2.2e+02 Score=28.37 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=45.5
Q ss_pred hhccCcEEEEEeeccCCCCCchHHHHHHHHHc---CCEEEEEcCCCHHHHHHHHHH
Q psy8116 116 YIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRA---GITVRMVTGDNINTARSIATK 168 (591)
Q Consensus 116 ~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~a---GI~v~~~TGd~~~ta~~ia~~ 168 (591)
-...|++=+=+++=.+.+.|+..++++.++.. |..++-.+.|++..|++++.-
T Consensus 88 ~~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 88 ALGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred HhCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34578888888888888999999999999999 999997888888888888764
No 237
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=26.53 E-value=3.7e+02 Score=27.71 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=42.2
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHhhhcccchhhHHHHhhhcCcceEEEe
Q psy8116 135 PEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRRVRDANGDVQQHLLDKVWPRLRVLAR 214 (591)
Q Consensus 135 ~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r 214 (591)
+.+.++++-+..-|..++++=.....++..+++.+++. ++|+.+= ..
T Consensus 88 Es~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vP-------VINa~~g--------------------------~~ 134 (305)
T PRK00856 88 ETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVP-------VINAGDG--------------------------SH 134 (305)
T ss_pred cCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCC-------EEECCCC--------------------------CC
Confidence 44455555555555556666555555666666555442 2332210 01
Q ss_pred cChhhHHHHHHHHHHhhcCCCCcEEEEECCCCC
Q psy8116 215 SSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN 247 (591)
Q Consensus 215 ~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~N 247 (591)
..|.|=..=+-.+.+......+..|+++||+.|
T Consensus 135 ~HPtQ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~ 167 (305)
T PRK00856 135 QHPTQALLDLLTIREEFGRLEGLKVAIVGDIKH 167 (305)
T ss_pred CCcHHHHHHHHHHHHHhCCCCCCEEEEECCCCC
Confidence 234433333334444445567789999999953
No 238
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.21 E-value=3.5e+02 Score=27.57 Aligned_cols=65 Identities=14% Similarity=0.141 Sum_probs=34.2
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCC----CHHhhhcCCeeeeeCCCccH---HHHhcccccccC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN----DGPALKKADVGFAMGIAGTD---VAKEASDIILTD 279 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~N----D~~mLk~A~vGiamg~~~~~---~ak~aad~vl~~ 279 (591)
|.-+||..=.++++. +...-.|..|+++|.|.. =+.||...+.-+.+-...+. ..-..||+++..
T Consensus 136 ~~PcTp~avi~lL~~---~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 136 FVPATPMGVMRLLKH---YHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred CCCCcHHHHHHHHHH---hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 334555443333333 323456899999999844 22355444443333222232 234678888763
No 239
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=26.20 E-value=94 Score=26.67 Aligned_cols=81 Identities=14% Similarity=0.217 Sum_probs=53.1
Q ss_pred HHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHHcCC-E-EEE
Q psy8116 76 EPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRAGI-T-VRM 153 (591)
Q Consensus 76 ~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~aGI-~-v~~ 153 (591)
.-+...|++|+.+.-. .+.++ ..+.-.+.+-.++|+-...++--+.+++.++.+++.+- . .++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~--------------l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~ 85 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEE--------------IVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVL 85 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHH--------------HHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEE
Confidence 3466799999766621 22211 01112345667888888777777899999999999975 3 466
Q ss_pred EcCCCHHHHHHHHHHcCC
Q psy8116 154 VTGDNINTARSIATKCGI 171 (591)
Q Consensus 154 ~TGd~~~ta~~ia~~~gi 171 (591)
+-|.........+++.|.
T Consensus 86 vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 86 VGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred EECCCCChhHHHHHHcCC
Confidence 777665544567788886
No 240
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=25.80 E-value=62 Score=24.19 Aligned_cols=24 Identities=25% Similarity=0.493 Sum_probs=17.5
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCC
Q psy8116 135 PEVPDAIRKCQRAGITVRMVTGDN 158 (591)
Q Consensus 135 ~~v~~~I~~l~~aGI~v~~~TGd~ 158 (591)
|+-.+.++.|.++|++|.|.|-+.
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHH
Confidence 456899999999999999988643
No 241
>PF04056 Ssl1: Ssl1-like; InterPro: IPR007198 Ssl1-like proteins are 40 kDa subunits of the transcription factor II H complex. This domain is often found associated with the C2H2 type Zn-finger (IPR007087 from INTERPRO).; GO: 0008270 zinc ion binding, 0006281 DNA repair, 0006355 regulation of transcription, DNA-dependent
Probab=25.40 E-value=2.1e+02 Score=27.32 Aligned_cols=63 Identities=19% Similarity=0.361 Sum_probs=42.9
Q ss_pred cEEEEEeeccCCCCCchHHHHHHHHHcCCEEEEEc-CCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh
Q psy8116 121 LTGLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVT-GDNINTARSIATKCGILKPGDDFLILEGKEFNRR 189 (591)
Q Consensus 121 l~~lG~i~i~d~lr~~v~~~I~~l~~aGI~v~~~T-Gd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~ 189 (591)
+.+.|.+..-||- +..++|+.|++.+|+|-+++ +-...-.+.++++.| +.+.++++...+.+.
T Consensus 105 lvi~gSl~t~Dp~--di~~ti~~l~~~~IrvsvI~laaEv~I~k~i~~~T~----G~y~V~lde~H~~~l 168 (193)
T PF04056_consen 105 LVIFGSLTTCDPG--DIHETIESLKKENIRVSVISLAAEVYICKKICKETG----GTYGVILDEDHFKEL 168 (193)
T ss_pred EEEEeecccCCch--hHHHHHHHHHHcCCEEEEEEEhHHHHHHHHHHHhhC----CEEEEecCHHHHHHH
Confidence 4567888877855 67899999999999877665 223444556666555 566667766555443
No 242
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=24.91 E-value=55 Score=28.37 Aligned_cols=32 Identities=22% Similarity=0.118 Sum_probs=26.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy8116 132 PVRPEVPDAIRKCQRAGITVRMVTGDNINTAR 163 (591)
Q Consensus 132 ~lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~ 163 (591)
.-.+++.++++.+++.|.+++.+|+.......
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la 89 (120)
T cd05710 58 GNTKETVAAAKFAKEKGATVIGLTDDEDSPLA 89 (120)
T ss_pred CCChHHHHHHHHHHHcCCeEEEEECCCCCcHH
Confidence 35688999999999999999999997655433
No 243
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=24.68 E-value=4.5e+02 Score=27.61 Aligned_cols=46 Identities=20% Similarity=0.395 Sum_probs=30.4
Q ss_pred eeccCCCCCchHHHHHHHHHc-CCE---EEEEcCCCHHHHH------HHHHHcCCC
Q psy8116 127 VGIEDPVRPEVPDAIRKCQRA-GIT---VRMVTGDNINTAR------SIATKCGIL 172 (591)
Q Consensus 127 i~i~d~lr~~v~~~I~~l~~a-GI~---v~~~TGd~~~ta~------~ia~~~gi~ 172 (591)
-.+.+.++.+.++.++.++++ |++ .++.-||++.... ..|+++||.
T Consensus 62 k~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~ 117 (345)
T PLN02897 62 NVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIK 117 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCE
Confidence 345566778888888888776 654 3456677766554 346677873
No 244
>PRK10481 hypothetical protein; Provisional
Probab=24.48 E-value=4.7e+02 Score=25.61 Aligned_cols=125 Identities=19% Similarity=0.219 Sum_probs=71.0
Q ss_pred CCceecCCHHHHHHHHHHHHHHHhhccCeEEEEE-EEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCC
Q psy8116 56 DGNLEKFTREMQDRLVRNVIEPMACDGLRTISIA-YRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVR 134 (591)
Q Consensus 56 ~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A-~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr 134 (591)
||....++++.-+..+++.++++..+|..++.++ +.+|+.-.... ..-.++...- ..+-.-+.--+-+|+--|..
T Consensus 64 dG~~v~~s~~~v~~~lq~~i~~l~~~g~d~ivl~Ctgdfp~l~a~r---~~l~~P~~~i-~~lv~Al~~g~riGVitP~~ 139 (224)
T PRK10481 64 DGQQVHVSKQKVERDLQSVIEVLDNQGYDVILLLCTGEFPSLTARN---AILLEPSRIL-PPLVAAIVGGHQVGVIVPVE 139 (224)
T ss_pred CCCEEEEEHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCCCccccC---ccccCchhhH-HHHHHHhcCCCeEEEEEeCH
Confidence 7777888887777778899999999999988776 44444321000 0000111100 11111122223344444677
Q ss_pred CchHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCceEEecchhh
Q psy8116 135 PEVPDAIRKCQRAGITVRMVTGD----NINTARSIATKCGILKPGDDFLILEGKEF 186 (591)
Q Consensus 135 ~~v~~~I~~l~~aGI~v~~~TGd----~~~ta~~ia~~~gi~~~~~~~i~l~g~~~ 186 (591)
+.+.+..++.++.|+.+.+.... ........++++. .++.+.+++.+..+
T Consensus 140 ~qi~~~~~kw~~~G~~v~~~~aspy~~~~~~l~~aa~~L~--~~gaD~Ivl~C~G~ 193 (224)
T PRK10481 140 EQLAQQAQKWQVLQKPPVFALASPYHGSEEELIDAGKELL--DQGADVIVLDCLGY 193 (224)
T ss_pred HHHHHHHHHHHhcCCceeEeecCCCCCCHHHHHHHHHHhh--cCCCCEEEEeCCCc
Confidence 78888888888889988765532 3334445555543 23555666655443
No 245
>PRK00208 thiG thiazole synthase; Reviewed
Probab=24.41 E-value=2.6e+02 Score=27.89 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=45.4
Q ss_pred hhhccCcEEEEEeeccCCCCCchHHHHHHHHHc---CCEEEEEcCCCHHHHHHHHHH
Q psy8116 115 EYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQRA---GITVRMVTGDNINTARSIATK 168 (591)
Q Consensus 115 ~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~a---GI~v~~~TGd~~~ta~~ia~~ 168 (591)
+-...|++=+=+++=.+.+.|+..++++.++.. |..++-.+-|++..|++++.-
T Consensus 87 e~~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 87 EALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred HHhCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 344678888888888888999999999999999 999996777788888887763
No 246
>COG3707 AmiR Response regulator with putative antiterminator output domain [Signal transduction mechanisms]
Probab=23.86 E-value=4e+02 Score=25.45 Aligned_cols=78 Identities=15% Similarity=0.124 Sum_probs=57.5
Q ss_pred HHHHhhccCeEEEEEEEecCCCcccccccccCCCCCCchhhhhccCcEEEEEeeccCCCCCchHHHHHHHHH-cCCEEEE
Q psy8116 75 IEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPNWDDEEYIVNNLTGLCVVGIEDPVRPEVPDAIRKCQR-AGITVRM 153 (591)
Q Consensus 75 ~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~i~d~lr~~v~~~I~~l~~-aGI~v~~ 153 (591)
.+.+...||.+++.+...+...+ ..+...-|+.+ +.+++|-++ ..+..-.+.+ .+-.+++
T Consensus 22 ~~~l~eag~~~Vg~~~~~~~~~~---------------~~~~~~pDvVi---ldie~p~rd-~~e~~~~~~~~~~~piv~ 82 (194)
T COG3707 22 REGLLEAGYQRVGEAADGLEAVE---------------VCERLQPDVVI---LDIEMPRRD-IIEALLLASENVARPIVA 82 (194)
T ss_pred HHHHHHcCCeEeeeecccccchh---------------HHHhcCCCEEE---EecCCCCcc-HHHHHHHhhcCCCCCEEE
Confidence 44567799999999977654322 12334456665 567999999 6666655555 6788999
Q ss_pred EcCCCHHHHHHHHHHcCC
Q psy8116 154 VTGDNINTARSIATKCGI 171 (591)
Q Consensus 154 ~TGd~~~ta~~ia~~~gi 171 (591)
+|+.+.......|...|.
T Consensus 83 lt~~s~p~~i~~a~~~Gv 100 (194)
T COG3707 83 LTAYSDPALIEAAIEAGV 100 (194)
T ss_pred EEccCChHHHHHHHHcCC
Confidence 999999999999999987
No 247
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=23.10 E-value=1.1e+03 Score=26.71 Aligned_cols=16 Identities=13% Similarity=0.339 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHhhc
Q psy8116 494 FGIGTLLWGQVVTTVP 509 (591)
Q Consensus 494 ~~~~~ll~~eiik~i~ 509 (591)
..++.++++-+.++++
T Consensus 362 ~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 362 SCAGAVILGLLFSKIR 377 (599)
T ss_pred HHHHHHHHHHHHHHcc
Confidence 3344455566666554
No 248
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.07 E-value=4.6e+02 Score=26.94 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=27.3
Q ss_pred CCCCcEEEEECCCCCC----HHhhhcCCeeeeeCCCccH---HHHhccccccc
Q psy8116 233 SDSREVVAVTGDGTND----GPALKKADVGFAMGIAGTD---VAKEASDIILT 278 (591)
Q Consensus 233 ~~~~~~va~iGDg~ND----~~mLk~A~vGiamg~~~~~---~ak~aad~vl~ 278 (591)
...|..++++|-|..= +.||...+.-+.+....+. ..-..||+++.
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIs 207 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVA 207 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4578899999998762 2355444444443333332 23467888876
No 249
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=22.58 E-value=73 Score=33.01 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=37.4
Q ss_pred EEeeccCCCCCchHHHHHHHHHc----CCEEEEEcCCC---HHH-HHHHHHHcCC
Q psy8116 125 CVVGIEDPVRPEVPDAIRKCQRA----GITVRMVTGDN---INT-ARSIATKCGI 171 (591)
Q Consensus 125 G~i~i~d~lr~~v~~~I~~l~~a----GI~v~~~TGd~---~~t-a~~ia~~~gi 171 (591)
|++.-.+++-+++.++++.|++. |+++..+|-.. ..+ +..+.+++|+
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~ 63 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV 63 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC
Confidence 67777888999999999999998 99999999554 333 4445577787
No 250
>TIGR00129 fdhD_narQ formate dehydrogenase family accessory protein FdhD. FdhD in E. coli and NarQ in B. subtilis are required for the activity of formate dehydrogenase. The gene name in B. subtilis reflects the requirement of the neighboring gene narA for nitrate assimilation, for which NarQ is not required. In some species, the gene is associated not with a known formate dehydrogenase but with a related putative molybdopterin-binding oxidoreductase. A reasonable hypothesis is that this protein helps prepare a required cofactor for assembly into the holoenzyme.
Probab=22.43 E-value=1.3e+02 Score=29.83 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGI 171 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 171 (591)
.|.+.++-++||.+.+..+-+...|..+|++.||
T Consensus 182 ~emv~Ka~~aGIpvlvS~sapT~lavelA~~~gi 215 (237)
T TIGR00129 182 SEMVQKAARCGVPIIASKSAPTDLAIEVAEESNI 215 (237)
T ss_pred HHHHHHHHHcCCCEEEEcccchHHHHHHHHHhCC
Confidence 6888999999999999999999999999999998
No 251
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain. GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=21.85 E-value=1.7e+02 Score=25.29 Aligned_cols=50 Identities=10% Similarity=0.116 Sum_probs=36.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEE-EcCCCHHHHHHHHHHcCCCCCCCceEEecchh
Q psy8116 131 DPVRPEVPDAIRKCQRAGITVRM-VTGDNINTARSIATKCGILKPGDDFLILEGKE 185 (591)
Q Consensus 131 d~lr~~v~~~I~~l~~aGI~v~~-~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~ 185 (591)
+...+.+.+..+.|+++|+++.+ .. ++......-|.+.|. ...+++...+
T Consensus 38 ~~~~~~a~~la~~LR~~gi~v~~d~~-~sl~kqlk~A~k~g~----~~~iiiG~~e 88 (121)
T cd00858 38 DELVEIAKEISEELRELGFSVKYDDS-GSIGRRYARQDEIGT----PFCVTVDFDT 88 (121)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEeCC-CCHHHHHHHhHhcCC----CEEEEECcCc
Confidence 45566777788999999999988 56 778888888888887 3444444444
No 252
>PRK00724 formate dehydrogenase accessory protein; Reviewed
Probab=21.70 E-value=1.4e+02 Score=30.13 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=28.6
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy8116 138 PDAIRKCQRAGITVRMVTGDNINTARSIATKCGI 171 (591)
Q Consensus 138 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 171 (591)
.|.++++..+||.+++.-+-+...|..+|++.||
T Consensus 211 ~emv~Ka~~aGipvivS~saPT~lAVelA~~~gi 244 (263)
T PRK00724 211 SEMVQKAAMAGIPILVAVSAPTSLAVELAEELGL 244 (263)
T ss_pred HHHHHHHHHcCCcEEEEcccchHHHHHHHHHhCC
Confidence 5777888888888888888888888888888887
No 253
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=21.28 E-value=1.9e+02 Score=28.50 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=53.6
Q ss_pred echhhhhcccccccCCceecCCHHHHHHHHH-----------HHHHHHhhccCeEEEEEEEecCCCcccccccccCCCCC
Q psy8116 42 TKVLPRSCAFIYGRDGNLEKFTREMQDRLVR-----------NVIEPMACDGLRTISIAYRDFVPGKAEINQVHIDTEPN 110 (591)
Q Consensus 42 ~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~-----------~~~~~~a~~GlR~l~~A~k~~~~~~~~~~~~~~~~~~~ 110 (591)
+|.+|+.-..+....-.-.+++++.-++++. +.++.+.+.|.+++.+.-|.-..
T Consensus 85 DET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~--------------- 149 (229)
T TIGR01675 85 DDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL--------------- 149 (229)
T ss_pred ccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH---------------
Confidence 8888876543322211123344443433322 45677788999999888664211
Q ss_pred CchhhhhccCcEEEEEee-----c---cCCCCCch--HHHH-HHHHHcCCEEEEEcCCCHHH
Q psy8116 111 WDDEEYIVNNLTGLCVVG-----I---EDPVRPEV--PDAI-RKCQRAGITVRMVTGDNINT 161 (591)
Q Consensus 111 ~~~~~~ie~~l~~lG~i~-----i---~d~lr~~v--~~~I-~~l~~aGI~v~~~TGd~~~t 161 (591)
++..+.+|.-.|+-+ + .|.-++.+ ++.. +++.+.|.+|+..-||+..-
T Consensus 150 ---r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sD 208 (229)
T TIGR01675 150 ---RNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSD 208 (229)
T ss_pred ---HHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHH
Confidence 111112222222221 2 22322222 3333 47888999999999998644
No 254
>KOG1651|consensus
Probab=20.97 E-value=1.4e+02 Score=27.78 Aligned_cols=40 Identities=18% Similarity=0.336 Sum_probs=29.2
Q ss_pred hhhhhcccccccCCceecCCHHHHHHHHHHHHHHHhhccCeEEEEEEEecCC
Q psy8116 44 VLPRSCAFIYGRDGNLEKFTREMQDRLVRNVIEPMACDGLRTISIAYRDFVP 95 (591)
Q Consensus 44 ~il~~c~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~~~~ 95 (591)
.|.+.|. +|+..-.++ +...++|..+|+++|+|=-..+-.
T Consensus 41 NVAS~Cg-----------~T~~~Y~~l-~~L~~ky~~~Gl~ILaFPCNQFg~ 80 (171)
T KOG1651|consen 41 NVASQCG-----------LTESQYTEL-NELYEKYKDQGLEILAFPCNQFGN 80 (171)
T ss_pred Ecccccc-----------cchhcchhH-HHHHHHHhhCCeEEEEeccccccC
Confidence 6677887 455444443 567889999999999998766654
No 255
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=20.85 E-value=1.6e+02 Score=32.91 Aligned_cols=49 Identities=10% Similarity=0.302 Sum_probs=37.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCceEEecchhhHHh
Q psy8116 133 VRPEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGILKPGDDFLILEGKEFNRR 189 (591)
Q Consensus 133 lr~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~l~g~~~~~~ 189 (591)
-.+|+.++|+++++.|+++++ ||. .+..+|++.|+ ..+++.++..+...
T Consensus 130 ~~~e~~~~~~~l~~~G~~~vi--G~~--~~~~~A~~~gl----~~ili~s~esi~~a 178 (526)
T TIGR02329 130 TEEDARSCVNDLRARGIGAVV--GAG--LITDLAEQAGL----HGVFLYSADSVRQA 178 (526)
T ss_pred CHHHHHHHHHHHHHCCCCEEE--CCh--HHHHHHHHcCC----ceEEEecHHHHHHH
Confidence 356889999999999999988 665 56789999999 34555566554433
No 256
>PF13840 ACT_7: ACT domain ; PDB: 3S1T_A 1ZHV_A 3AB4_K 3AB2_O 2DTJ_A 3AAW_A 2RE1_B 3MAH_A 1ZVP_D.
Probab=20.81 E-value=1.2e+02 Score=23.18 Aligned_cols=38 Identities=24% Similarity=0.332 Sum_probs=27.1
Q ss_pred ccCcEEEEEeeccCCC-CCch-HHHHHHHHHcCCEEEEEc
Q psy8116 118 VNNLTGLCVVGIEDPV-RPEV-PDAIRKCQRAGITVRMVT 155 (591)
Q Consensus 118 e~~l~~lG~i~i~d~l-r~~v-~~~I~~l~~aGI~v~~~T 155 (591)
+.++..+-+.+-.-+. .+|+ ....+.|.++||.+.++|
T Consensus 3 ~~~~~~i~v~g~g~~~~~~Gv~a~i~~~La~~~I~i~~is 42 (65)
T PF13840_consen 3 EEDWAKISVVGPGLRFDVPGVAAKIFSALAEAGINIFMIS 42 (65)
T ss_dssp ESEEEEEEEEEECGTTTSHHHHHHHHHHHHHTTS-ECEEE
T ss_pred cCCEEEEEEEccccCCCcccHHHHHHHHHHHCCCCEEEEE
Confidence 4566677777764445 6666 456688999999999998
No 257
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=20.60 E-value=1.5e+02 Score=27.45 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=16.6
Q ss_pred HHHhhccCc-cccccccCCCCC-cchhhhhhcCCCCccC
Q psy8116 504 VVTTVPTRK-LPKILSWGRGHP-EEYTEAIQLGEEHKFD 540 (591)
Q Consensus 504 iik~i~~~~-~~~~~~~g~~~~-~~~~~~~~~~~~~~~~ 540 (591)
+++.+..++ .++..+.|-... .+..+...+.++.+++
T Consensus 113 vir~~R~r~~~rktRkYgvl~~~~~~~Em~pL~~ddede 151 (163)
T PF06679_consen 113 VIRTFRLRRRNRKTRKYGVLTTRAENVEMAPLEEDDEDE 151 (163)
T ss_pred HHHHHhhccccccceeecccCCCcccceecccCCCcccc
Confidence 445554333 233345554433 3555555564443333
No 258
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.60 E-value=3.9e+02 Score=27.24 Aligned_cols=65 Identities=14% Similarity=0.156 Sum_probs=36.3
Q ss_pred EEecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCC-C---HHhhhcCCeeeeeCCCccH---HHHhcccccccC
Q psy8116 212 LARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTN-D---GPALKKADVGFAMGIAGTD---VAKEASDIILTD 279 (591)
Q Consensus 212 ~~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~N-D---~~mLk~A~vGiamg~~~~~---~ak~aad~vl~~ 279 (591)
|.-+||.. +++.+..+.....|..|+++|-|.. = +.||...+.-+.+....+. ..-..||+++..
T Consensus 137 ~~PcTp~a---ii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 137 FRPCTPYG---VMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred CcCCCHHH---HHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 33455543 3443333333467889999999877 2 3355555555544333332 234678888763
No 259
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.46 E-value=5.2e+02 Score=26.57 Aligned_cols=63 Identities=17% Similarity=0.214 Sum_probs=33.2
Q ss_pred EecChhhHHHHHHHHHHhhcCCCCcEEEEECCCCCC----HHhhhcC----CeeeeeCCCccH---HHHhccccccc
Q psy8116 213 ARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTND----GPALKKA----DVGFAMGIAGTD---VAKEASDIILT 278 (591)
Q Consensus 213 ~r~sp~~K~~~v~~l~~~~~~~~~~~va~iGDg~ND----~~mLk~A----~vGiamg~~~~~---~ak~aad~vl~ 278 (591)
.-+||..=.++++ .+...-.|..|+++|-|..= +.||... +.-+.+....+. ..-..||+++.
T Consensus 137 ~PcTp~avi~lL~---~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 137 KPCTPHGIQKLLA---AAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVA 210 (297)
T ss_pred CCCCHHHHHHHHH---HhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 3455544333333 22234578899999988762 2345433 333333333332 23467888876
No 260
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=20.38 E-value=5e+02 Score=27.12 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=22.6
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy8116 135 PEVPDAIRKCQRAGITVRMVTGDNINTARSIATKCGI 171 (591)
Q Consensus 135 ~~v~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 171 (591)
+.+.++++-+..- ..++++-......+..+|+..++
T Consensus 88 Esl~DTarvls~y-~D~iviR~~~~~~~~~~a~~s~v 123 (332)
T PRK04284 88 ESTKDTARVLGGM-YDGIEYRGFSQRTVETLAEYSGV 123 (332)
T ss_pred cCHHHHHHHHHHh-CCEEEEecCchHHHHHHHHhCCC
Confidence 4555666666655 66666666666666666666654
No 261
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.37 E-value=2.6e+02 Score=28.32 Aligned_cols=53 Identities=19% Similarity=0.245 Sum_probs=40.6
Q ss_pred cCcEEEEEeeccCCCCC---chHHHHHHHHHcCCEEEEE-cCCCHHHHHHHHHHcCC
Q psy8116 119 NNLTGLCVVGIEDPVRP---EVPDAIRKCQRAGITVRMV-TGDNINTARSIATKCGI 171 (591)
Q Consensus 119 ~~l~~lG~i~i~d~lr~---~v~~~I~~l~~aGI~v~~~-TGd~~~ta~~ia~~~gi 171 (591)
-++..+++++....-.+ +..+.++.+++.|+++++. +.-+..++..++++.|+
T Consensus 196 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 196 YGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred cCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 36777888776543333 3357888899999998887 66788999999999986
No 262
>TIGR02854 spore_II_GA sigma-E processing peptidase SpoIIGA. Members of this protein family are the stage II sporulation protein SpoIIGA. This protein acts as an activating protease for Sigma-E, one of several specialized sigma factors of the sporulation process in Bacillus subtilis and related endospore-forming bacteria.
Probab=20.31 E-value=9.2e+02 Score=24.51 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=10.6
Q ss_pred HHHHHHHHhhhhhhhh
Q psy8116 334 MLWVNLIMDTLASLAL 349 (591)
Q Consensus 334 ~l~~nli~~~~~~l~l 349 (591)
+...|+++|.+..+.-
T Consensus 8 ~~l~Nf~~d~~LL~~t 23 (288)
T TIGR02854 8 VFLENFIIDYFLLYLT 23 (288)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4568999997654443
Done!