Query psy8121
Match_columns 285
No_of_seqs 233 out of 1703
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 19:09:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8121.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8121hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 1E-45 3.6E-50 377.9 25.9 240 36-283 55-302 (1034)
2 2zxe_A Na, K-ATPase alpha subu 100.0 1.4E-45 4.8E-50 376.6 22.6 240 36-283 50-297 (1028)
3 3ar4_A Sarcoplasmic/endoplasmi 100.0 2.6E-44 8.9E-49 366.7 24.3 237 36-283 7-258 (995)
4 1mhs_A Proton pump, plasma mem 100.0 4.4E-45 1.5E-49 366.5 9.6 218 42-283 76-294 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 4.6E-45 1.6E-49 366.2 -18.8 229 36-283 16-244 (885)
6 2hc8_A PACS, cation-transporti 100.0 1.7E-33 5.9E-38 215.3 11.7 111 154-269 2-112 (113)
7 3rfu_A Copper efflux ATPase; a 100.0 4.6E-33 1.6E-37 274.5 12.2 201 78-283 130-340 (736)
8 2kij_A Copper-transporting ATP 100.0 9.1E-33 3.1E-37 214.9 9.0 116 149-269 3-124 (124)
9 3j08_A COPA, copper-exporting 100.0 4.4E-32 1.5E-36 265.0 8.3 150 127-283 95-247 (645)
10 3j09_A COPA, copper-exporting 100.0 7.3E-32 2.5E-36 266.7 8.5 150 127-283 173-325 (723)
11 2jmz_A Hypothetical protein MJ 84.1 1.4 4.8E-05 35.4 5.1 37 165-201 102-138 (186)
12 2lcj_A PAB POLC intein; hydrol 78.7 2.8 9.4E-05 33.6 5.0 35 165-199 92-126 (185)
13 2z1c_A Hydrogenase expression/ 52.7 30 0.001 23.3 5.1 32 166-197 15-49 (75)
14 1at0_A 17-hedgehog; developmen 52.6 20 0.00069 27.2 4.9 30 166-195 72-103 (145)
15 4e2u_A PHO RADA intein; HINT-f 41.1 23 0.00078 27.6 3.6 29 166-195 97-125 (168)
16 3sgi_A DNA ligase; HET: DNA AM 36.2 13 0.00046 35.5 1.7 27 179-205 374-402 (615)
17 2cw8_A Endonuclease PI-pkoii; 34.7 45 0.0015 31.2 5.1 29 166-194 96-124 (537)
18 2k1g_A Lipoprotein SPR; soluti 33.6 32 0.0011 25.9 3.2 21 177-197 61-81 (135)
19 4glx_A DNA ligase; inhibitor, 33.4 12 0.00043 35.5 1.0 24 181-204 366-391 (586)
20 2owo_A DNA ligase; protein-DNA 30.8 16 0.00056 35.3 1.4 25 180-204 365-391 (671)
21 1dgs_A DNA ligase; AMP complex 29.4 19 0.00064 34.9 1.5 20 180-199 363-383 (667)
22 2jyx_A Lipoprotein SPR; soluti 29.0 25 0.00085 26.4 1.9 21 177-197 61-81 (136)
23 3jxo_A TRKA-N domain protein; 28.6 54 0.0018 21.8 3.5 23 169-192 45-69 (86)
24 3p42_A Predicted protein; beta 28.5 47 0.0016 27.5 3.7 29 166-194 166-202 (236)
25 2ot2_A Hydrogenase isoenzymes 27.3 73 0.0025 22.2 3.9 31 167-197 16-55 (90)
26 2j58_A WZA, outer membrane lip 26.6 35 0.0012 30.2 2.7 29 166-194 191-231 (359)
27 4aw6_A CAAX prenyl protease 1 26.4 2.4E+02 0.008 26.0 8.3 39 66-110 151-189 (482)
28 3v2d_V 50S ribosomal protein L 25.5 1E+02 0.0035 21.9 4.5 30 170-205 5-39 (101)
29 2e6z_A Transcription elongatio 25.3 32 0.0011 21.8 1.6 25 182-206 6-30 (59)
30 3ne0_A Resuscitation promoting 20.6 44 0.0015 27.3 2.0 19 177-195 152-170 (214)
31 3gt2_A Putative uncharacterize 20.5 39 0.0013 25.5 1.5 18 177-194 83-100 (142)
32 2in0_A Endonuclease PI-MTUI; h 20.3 55 0.0019 24.2 2.4 19 178-196 81-99 (139)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=1e-45 Score=377.93 Aligned_cols=240 Identities=24% Similarity=0.285 Sum_probs=215.9
Q ss_pred hcCHHHHHHHhCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHHHHhhhccCCCC
Q psy8121 36 LGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADE 115 (285)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ll~~~ai~s~~~~~~~~~~~ 115 (285)
..+++++++.|++++.+||| ++|+++|+++||+|+++.++++++|+.++++|++++.++|+++++++++...+....+
T Consensus 55 ~~~~~~~~~~l~~~~~~GLs--~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~ 132 (1034)
T 3ixz_A 55 QLSVAELEQKYQTSATKGLS--ASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEG 132 (1034)
T ss_pred hCCHHHHHHHhCCCcccCCC--HHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccC
Confidence 46999999999999989999 9999999999999999999899999999999999999999999998887754432111
Q ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEECCEEEEEEcCCcccCcEEEecCC
Q psy8121 116 DVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYG 195 (285)
Q Consensus 116 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G 195 (285)
+ ......|+++++++++++++.++++++++++++++++|+++.+ ++++|+|||++++|++++|||||||.|++|
T Consensus 133 ~----~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~--~~a~ViRdG~~~~I~~~eLv~GDiV~l~~G 206 (1034)
T 3ixz_A 133 D----LTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVP--QQATVIRDGDKFQINADQLVVGDLVEMKGG 206 (1034)
T ss_pred C----CccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCC--CeeEEEECCEEEEEEHHHCCCCcEEEEcCC
Confidence 0 0112357888888888888999999999999999999999865 789999999999999999999999999999
Q ss_pred CeeeccEEEEeeCceeEeccccCCCCCceeccCC--------CCCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhh
Q psy8121 196 DLLPADGCLIQSNDLKVDESSLTGESDHVKKGEA--------FDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGA 267 (285)
Q Consensus 196 ~~iPaDg~il~g~~l~vdeS~LTGEs~pv~k~~~--------~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 267 (285)
|+|||||+|++++++.||||+|||||.|+.|.++ ..|++|+||.+.+|+++++|++||.+|++|+|.++++.
T Consensus 207 d~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~ 286 (1034)
T 3ixz_A 207 DRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASG 286 (1034)
T ss_pred ceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcc
Confidence 9999999999998889999999999999999764 34789999999999999999999999999999999999
Q ss_pred cccccchHHHHHhhhc
Q psy8121 268 AVDEQEQEIKKKRKVG 283 (285)
Q Consensus 268 ~~~~~~~~~~~~~~~~ 283 (285)
++..++|+|+++++++
T Consensus 287 ~~~~~tpl~~~~~~~~ 302 (1034)
T 3ixz_A 287 VENEKTPIAIEIEHFV 302 (1034)
T ss_pred cccCCCcHHHHHHHHH
Confidence 9999999999998875
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=1.4e-45 Score=376.56 Aligned_cols=240 Identities=25% Similarity=0.301 Sum_probs=215.9
Q ss_pred hcCHHHHHHHhCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHHHHhhhccCCCC
Q psy8121 36 LGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADE 115 (285)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ll~~~ai~s~~~~~~~~~~~ 115 (285)
..+++++++.|++++.+||| ++|+++|+++||+|+++.++++|+|+.++++|++++.++|+++++++++++.+....+
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs--~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 127 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLT--NARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATE 127 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBC--HHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCHHHHHHHhCcCccCCCC--HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccc
Confidence 36899999999999889999 8999999999999999998889999999999999999999999999988765431100
Q ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEECCEEEEEEcCCcccCcEEEecCC
Q psy8121 116 DVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYG 195 (285)
Q Consensus 116 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G 195 (285)
.......|+++++++++++++.++++++++++++++++|+++.+ ++++|+|||++++|++++|||||||.|++|
T Consensus 128 ----~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~--~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~G 201 (1028)
T 2zxe_A 128 ----DEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVP--QQALVIRDGEKSTINAEFVVAGDLVEVKGG 201 (1028)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSC--SEEEEEETTEEEEEEGGGCCTTCEEEEETT
T ss_pred ----cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--CeeEEEECCEEEEEEHHHCCcCCEEEECCC
Confidence 00112358888888888888999999999999999999998765 789999999999999999999999999999
Q ss_pred CeeeccEEEEeeCceeEeccccCCCCCceeccCCC--------CCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhh
Q psy8121 196 DLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAF--------DPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGA 267 (285)
Q Consensus 196 ~~iPaDg~il~g~~l~vdeS~LTGEs~pv~k~~~~--------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 267 (285)
|+|||||+|++|+++.||||+|||||.|+.|.++. .|++|+||.|.+|+++++|++||.+|.+|+|+++++.
T Consensus 202 d~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 281 (1028)
T 2zxe_A 202 DRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASG 281 (1028)
T ss_dssp CBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHH
T ss_pred CEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccC
Confidence 99999999999987899999999999999998753 3589999999999999999999999999999999999
Q ss_pred cccccchHHHHHhhhc
Q psy8121 268 AVDEQEQEIKKKRKVG 283 (285)
Q Consensus 268 ~~~~~~~~~~~~~~~~ 283 (285)
++.+++|+|+.+++++
T Consensus 282 ~~~~~t~lq~~~~~~~ 297 (1028)
T 2zxe_A 282 LEVGRTPIAIEIEHFI 297 (1028)
T ss_dssp SCCCCCHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHH
Confidence 9999999999999875
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=2.6e-44 Score=366.75 Aligned_cols=237 Identities=28% Similarity=0.428 Sum_probs=213.6
Q ss_pred hcCHHHHHHHhCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHHHHhhhccCCCC
Q psy8121 36 LGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADE 115 (285)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ll~~~ai~s~~~~~~~~~~~ 115 (285)
..+++++++.|++++.+||| ++|+++|+++||+|+++.++++++|+.++++|++++.++++++++++++++++...
T Consensus 7 ~~~~~~~~~~l~~~~~~GLs--~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~-- 82 (995)
T 3ar4_A 7 SKSTEECLAYFGVSETTGLT--PDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG-- 82 (995)
T ss_dssp GSCHHHHHHHHTCCTTTCBC--HHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS--
T ss_pred hCCHHHHHHHhCCCcccCCC--HHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--
Confidence 46899999999999889999 89999999999999999988889999999999999999999999999988765310
Q ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEECCE--EEEEEcCCcccCcEEEec
Q psy8121 116 DVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGE--VKQISVGDIVVGDICQIK 193 (285)
Q Consensus 116 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~V~rdg~--~~~i~~~~lv~GDiv~l~ 193 (285)
.+....|+++++++++++++.+++.++++++++++++|+++.+ ++++|+|||+ .++|++++|+|||+|.|+
T Consensus 83 -----~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~--~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~ 155 (995)
T 3ar4_A 83 -----EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEP--EMGKVYRADRKSVQRIKARDIVPGDIVEVA 155 (995)
T ss_dssp -----SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSC--SEEEEEBTTCSSCEEEEGGGCCTTCEEEEE
T ss_pred -----ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CeEEEEeCCCceEEEEEHHHCCCCCEEEEC
Confidence 0112368899998888888889999999999999999998755 7899999987 699999999999999999
Q ss_pred CCCeeeccEEEEe--eCceeEeccccCCCCCceeccCCC-----------CCeEeeccEeeeeeEEEEEEEecCccHHHH
Q psy8121 194 YGDLLPADGCLIQ--SNDLKVDESSLTGESDHVKKGEAF-----------DPMVLSGTHVMEGSGKMLVTAVGVNSQAGI 260 (285)
Q Consensus 194 ~G~~iPaDg~il~--g~~l~vdeS~LTGEs~pv~k~~~~-----------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 260 (285)
+||+|||||+|++ +..+.||||+|||||.|+.|.++. +|++|+||.|.+|.++++|++||.+|.+|+
T Consensus 156 ~Gd~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~ 235 (995)
T 3ar4_A 156 VGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGK 235 (995)
T ss_dssp TTCBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHH
T ss_pred CCCcccccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHH
Confidence 9999999999965 445799999999999999998752 379999999999999999999999999999
Q ss_pred HHHHHhhcccccchHHHHHhhhc
Q psy8121 261 IFTLLGAAVDEQEQEIKKKRKVG 283 (285)
Q Consensus 261 i~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
|+++++.++.+++|+|+++++++
T Consensus 236 i~~~~~~~~~~~tplq~~~~~~~ 258 (995)
T 3ar4_A 236 IRDQMAATEQDKTPLQQKLDEFG 258 (995)
T ss_dssp HHHHHHTCCCCCCHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCcHHHHHHHHH
Confidence 99999999999999999999875
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=4.4e-45 Score=366.55 Aligned_cols=218 Identities=26% Similarity=0.395 Sum_probs=199.1
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHHHHhhhccCCCCCCCCcc
Q psy8121 42 ICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADEDVFDDD 121 (285)
Q Consensus 42 l~~~l~t~~~~GLs~~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ll~~~ai~s~~~~~~~~~~~~~~~~~ 121 (285)
+++.|++++.+||| ++|+++|+++||+|+++.+ +.++|..++++|++++.++++++++++++++
T Consensus 76 ~~~~l~t~~~~GLs--~~ea~~r~~~~G~N~l~~~-~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g------------- 139 (920)
T 1mhs_A 76 PEDMLQTDTRVGLT--SEEVVQRRRKYGLNQMKEE-KENHFLKFLGFFVGPIQFVMEGAAVLAAGLE------------- 139 (920)
T ss_dssp SSTTTTTCCCCCCC--SHHHHHHHHHTSSSSCCCC-CCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------------
T ss_pred HHHHhCCCcCCCCC--HHHHHHHHHhcCCCccCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 34568888888999 7999999999999999976 4678888999999999888888888776543
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEECCEEEEEEcCCcccCcEEEecCCCeeecc
Q psy8121 122 EAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPAD 201 (285)
Q Consensus 122 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G~~iPaD 201 (285)
.|.++++++++++++.++++++++++++++++|+++.+ ++++|+|||++++|++++|||||+|.|++||+||||
T Consensus 140 ----~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~--~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaD 213 (920)
T 1mhs_A 140 ----DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLA--LKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPAD 213 (920)
T ss_dssp ----CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC--SSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSE
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--CEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccc
Confidence 57777888878888899999999999999999988765 678999999999999999999999999999999999
Q ss_pred EEEEeeCc-eeEeccccCCCCCceeccCCCCCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhhcccccchHHHHHh
Q psy8121 202 GCLIQSND-LKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKR 280 (285)
Q Consensus 202 g~il~g~~-l~vdeS~LTGEs~pv~k~~~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~ 280 (285)
|+|++|++ +.||||+|||||.|+.|.++ +.+|+||.|.+|.++++|++||.+|.+|+|++++++++..++|+|+.++
T Consensus 214 g~ll~g~~~l~VDES~LTGES~PV~K~~g--d~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~ 291 (920)
T 1mhs_A 214 GRIVTDDAFLQVDQSALTGESLAVDKHKG--DQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLN 291 (920)
T ss_dssp EEEEEESSCCEEBCTTTSSCCCCEECCSS--CEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHH
T ss_pred eEEEecCceeeeeccccCCCCcceEecCC--CeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHH
Confidence 99999985 89999999999999999988 8999999999999999999999999999999999999999999999998
Q ss_pred hhc
Q psy8121 281 KVG 283 (285)
Q Consensus 281 ~~~ 283 (285)
+++
T Consensus 292 ~i~ 294 (920)
T 1mhs_A 292 GIG 294 (920)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=4.6e-45 Score=366.16 Aligned_cols=229 Identities=27% Similarity=0.379 Sum_probs=204.4
Q ss_pred hcCHHHHHHHhCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHHHHhhhccCCCC
Q psy8121 36 LGGIQEICKKLYTSPSEGLSGSAADMEHRRDTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFYKPADE 115 (285)
Q Consensus 36 ~~~~~~l~~~l~t~~~~GLs~~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ll~~~ai~s~~~~~~~~~~~ 115 (285)
..+.+++++.|+++ .+||| ++|+++|+++||+|+++.++ +++|+.++++|.+|+.++|+++++++++++....
T Consensus 16 ~~~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~--- 88 (885)
T 3b8c_A 16 KIPIEEVFQQLKCS-REGLT--TQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDG--- 88 (885)
T ss_dssp SSSTTCCTTTSSSC-SSCST--HHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTT---
T ss_pred hCCHHHHHHHhCCC-CCCCC--HHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence 36789999999998 58999 99999999999999999876 6778888999999999999999988877653211
Q ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEECCEEEEEEcCCcccCcEEEecCC
Q psy8121 116 DVFDDDEAKHGWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYG 195 (285)
Q Consensus 116 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G 195 (285)
....|++++.++++++++.++++++++++++++++|.++.+ ++++|+|||++++|++++|+|||+|.|++|
T Consensus 89 -------~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~--~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~G 159 (885)
T 3b8c_A 89 -------RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLA--PKTKVLRDGKWSEQEAAILVPGDIVSIKLG 159 (885)
T ss_dssp -------SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCS--CCCCCCCSSCSCCCCTTTTCTTSBCCCCSS
T ss_pred -------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CeEEEEECCEEEEEEHHHCCCCCEEEECCC
Confidence 12368888888877777788899999999999999988765 678999999999999999999999999999
Q ss_pred CeeeccEEEEeeCceeEeccccCCCCCceeccCCCCCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhhcccccchH
Q psy8121 196 DLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQE 275 (285)
Q Consensus 196 ~~iPaDg~il~g~~l~vdeS~LTGEs~pv~k~~~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~ 275 (285)
|+|||||+|++|+++.||||+|||||.|+.|.++ +.+|+||.|.+|.++++|++||.+|.+|+|++++++ +..++|+
T Consensus 160 d~IPaDg~ll~g~~l~VdES~LTGES~Pv~K~~g--~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~l 236 (885)
T 3b8c_A 160 DIIPADARLLEGDPLKVDQSALTGESLPVTKHPG--QEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHF 236 (885)
T ss_dssp CCCSSCCCCCCSSCBCCCCCSTTCCSSCCCBSSC--CCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTT
T ss_pred CEEeeceEEEEcCcccccccccCCCCcceEecCC--CccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChH
Confidence 9999999999999889999999999999999988 789999999999999999999999999999999987 6889999
Q ss_pred HHHHhhhc
Q psy8121 276 IKKKRKVG 283 (285)
Q Consensus 276 ~~~~~~~~ 283 (285)
|+.+++++
T Consensus 237 q~~~~~i~ 244 (885)
T 3b8c_A 237 QKVLTAIG 244 (885)
T ss_dssp TTTTHHHH
T ss_pred HHHHHHHH
Confidence 99888875
No 6
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=100.00 E-value=1.7e-33 Score=215.32 Aligned_cols=111 Identities=29% Similarity=0.409 Sum_probs=103.6
Q ss_pred HHHHHHhhhcCCCeEEEEECCEEEEEEcCCcccCcEEEecCCCeeeccEEEEeeCceeEeccccCCCCCceeccCCCCCe
Q psy8121 154 QFRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGEAFDPM 233 (285)
Q Consensus 154 ~~~~l~~~~~~~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G~~iPaDg~il~g~~l~vdeS~LTGEs~pv~k~~~~~~~ 233 (285)
++++|.++.+ .+++|+|||+++.|++++|+|||+|.+++||+|||||+|++|++ .||||+|||||.|+.|.++ +.
T Consensus 2 al~~L~~l~p--~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g--~~ 76 (113)
T 2hc8_A 2 AIKKLVGLQA--KTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG--DE 76 (113)
T ss_dssp HHHHHHHHSC--SEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTT--CE
T ss_pred HHHHHhcCCC--CEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCC--CE
Confidence 3556666654 78999999999999999999999999999999999999999984 9999999999999999998 79
Q ss_pred EeeccEeeeeeEEEEEEEecCccHHHHHHHHHhhcc
Q psy8121 234 VLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAV 269 (285)
Q Consensus 234 v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 269 (285)
+|+||.+.+|.++++|+++|.+|.+|+|++++++++
T Consensus 77 v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a~ 112 (113)
T 2hc8_A 77 VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112 (113)
T ss_dssp ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHHH
T ss_pred EEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999998875
No 7
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=4.6e-33 Score=274.54 Aligned_cols=201 Identities=19% Similarity=0.286 Sum_probs=153.2
Q ss_pred CchHHHHHHHHhhhh---HHHHHHHHHHHHHHhhhccCCCCCCCC-----ccccccchHHHHHHHHHHHHHHHHHHHHHH
Q psy8121 78 PKTFLTLVWEALQDV---TLIILEIAALVSLGLSFYKPADEDVFD-----DDEAKHGWIEGLAILISVIVVVIVTAFNDY 149 (285)
Q Consensus 78 ~~~~~~~~~~~~~~~---~~~ll~~~ai~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~il~~~~~~~~~~~~~~~ 149 (285)
.++|++..|+.+++. +..+..++...+|+++++.......+. ..+..+.|+++++++++++ .+..+++.+
T Consensus 130 g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~--llg~~le~~ 207 (736)
T 3rfu_A 130 GWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLV--LLGQVLELK 207 (736)
T ss_dssp THHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHH--HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHH--HHHHHHHHH
Confidence 567888888888763 233344455555555543321100000 0112346888776654433 244555555
Q ss_pred HHHHHHHHHHhhhc-CCCeEEEEE-CCEEEEEEcCCcccCcEEEecCCCeeeccEEEEeeCceeEeccccCCCCCceecc
Q psy8121 150 TKERQFRGLQSRIE-GEHKFSVIR-QGEVKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKG 227 (285)
Q Consensus 150 ~~~k~~~~l~~~~~-~~~~~~V~r-dg~~~~i~~~~lv~GDiv~l~~G~~iPaDg~il~g~~l~vdeS~LTGEs~pv~k~ 227 (285)
.++|+.+.+++++. .+.+++++| ||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|.
T Consensus 208 a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGES~Pv~K~ 286 (736)
T 3rfu_A 208 AREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPIPVAKE 286 (736)
T ss_dssp HHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTCSSCEEEC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-EeeecccCCccccEEec
Confidence 55554444444333 247788887 9999999999999999999999999999999999986 89999999999999999
Q ss_pred CCCCCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhhcccccchHHHHHhhhc
Q psy8121 228 EAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVG 283 (285)
Q Consensus 228 ~~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
++ +.+|+||.+.+|.++++|++||.+|.+|+|++++++++..++|+|+.+++++
T Consensus 287 ~g--d~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a 340 (736)
T 3rfu_A 287 AS--AKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVS 340 (736)
T ss_dssp TT--CEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHH
T ss_pred cC--CcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 98 7899999999999999999999999999999999999999999999999875
No 8
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.98 E-value=9.1e-33 Score=214.88 Aligned_cols=116 Identities=28% Similarity=0.368 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCE------EEEEEcCCcccCcEEEecCCCeeeccEEEEeeCceeEeccccCCCCC
Q psy8121 149 YTKERQFRGLQSRIEGEHKFSVIRQGE------VKQISVGDIVVGDICQIKYGDLLPADGCLIQSNDLKVDESSLTGESD 222 (285)
Q Consensus 149 ~~~~k~~~~l~~~~~~~~~~~V~rdg~------~~~i~~~~lv~GDiv~l~~G~~iPaDg~il~g~~l~vdeS~LTGEs~ 222 (285)
+++++++++|.++.+ .+++|+|+|+ ++.|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.
T Consensus 3 ~ka~~~l~~L~~l~p--~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~ 79 (124)
T 2kij_A 3 FTMSEALAKLISLQA--TEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAM 79 (124)
T ss_dssp ---CCHHHHHHHTCC--SEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSS
T ss_pred HHHHHHHHHHhccCC--CEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCc
Confidence 456677888887755 8899999764 6889999999999999999999999999999997 999999999999
Q ss_pred ceeccCCCCCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhhcc
Q psy8121 223 HVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAV 269 (285)
Q Consensus 223 pv~k~~~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 269 (285)
|+.|.++ +.+|+||.+.+|.+.++|+++|.+|.+|+|++++++++
T Consensus 80 pv~k~~g--~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a~ 124 (124)
T 2kij_A 80 PVAKKPG--STVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQ 124 (124)
T ss_dssp CEECCTT--EEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTTC
T ss_pred cEEeCCC--CEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhhC
Confidence 9999988 89999999999999999999999999999999998764
No 9
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=99.97 E-value=4.4e-32 Score=265.02 Aligned_cols=150 Identities=25% Similarity=0.366 Sum_probs=130.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhcCCCeEEEEECCEEEEEEcCCcccCcEEEecCCCeeeccEE
Q psy8121 127 WIEGLAILISVIVVVIVTAFNDYTKERQ---FRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGC 203 (285)
Q Consensus 127 ~~~~~~il~~~~~~~~~~~~~~~~~~k~---~~~l~~~~~~~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G~~iPaDg~ 203 (285)
|++.++++++++ .+..+++.+.+.|+ .++|.++. +.+++|+|||++++|++++|+|||+|.+++||+|||||+
T Consensus 95 ~~~~~~~i~~~~--~ig~~le~~~~~~~~~~l~~l~~l~--~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~ 170 (645)
T 3j08_A 95 FYETSVLLLAFL--LLGRTLEARAKSRTGEAIKKLVGLQ--AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGV 170 (645)
T ss_dssp CCCSHHHHHHHH--HHHHHHHHHHHCCCCCCCHHHHHTS--CSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCC--CCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEE
Confidence 566555544433 34455565555543 55565554 478999999999999999999999999999999999999
Q ss_pred EEeeCceeEeccccCCCCCceeccCCCCCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhhcccccchHHHHHhhhc
Q psy8121 204 LIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVG 283 (285)
Q Consensus 204 il~g~~l~vdeS~LTGEs~pv~k~~~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
|++|++ .||||+|||||.|+.|.++ +.+|+||.+.+|.++++|+++|.+|.+|+|++++++++.+++|+|+.+++++
T Consensus 171 vl~G~~-~VdeS~LTGES~Pv~K~~g--~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~ 247 (645)
T 3j08_A 171 VVEGES-YVDESMISGEPVPVLKSKG--DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVV 247 (645)
T ss_dssp EEECCE-EEECHHHHCCSSCEEECTT--CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHH
T ss_pred EEECcE-EEEcccccCCCCceecCCC--CEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 999986 8999999999999999988 7899999999999999999999999999999999999999999999999875
No 10
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=99.97 E-value=7.3e-32 Score=266.66 Aligned_cols=150 Identities=25% Similarity=0.366 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhcCCCeEEEEECCEEEEEEcCCcccCcEEEecCCCeeeccEE
Q psy8121 127 WIEGLAILISVIVVVIVTAFNDYTKERQ---FRGLQSRIEGEHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPADGC 203 (285)
Q Consensus 127 ~~~~~~il~~~~~~~~~~~~~~~~~~k~---~~~l~~~~~~~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G~~iPaDg~ 203 (285)
|++.++++++++ .+..+++.+.+.|+ .++|.++. +.+++|+|||++++|++++|+|||+|.|++||+|||||+
T Consensus 173 ~~~~~~~i~~~~--~ig~~le~~~~~~~~~~i~~l~~l~--~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~ 248 (723)
T 3j09_A 173 FYETSVLLLAFL--LLGRTLEARAKSRTGEAIKKLVGLQ--AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGV 248 (723)
T ss_dssp CCTTHHHHHHHH--HHHHHHHHHHHTTCCCTTHHHHHTS--CSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcC--CCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEE
Confidence 666555554433 34555666655554 55555544 478999999999999999999999999999999999999
Q ss_pred EEeeCceeEeccccCCCCCceeccCCCCCeEeeccEeeeeeEEEEEEEecCccHHHHHHHHHhhcccccchHHHHHhhhc
Q psy8121 204 LIQSNDLKVDESSLTGESDHVKKGEAFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDEQEQEIKKKRKVG 283 (285)
Q Consensus 204 il~g~~l~vdeS~LTGEs~pv~k~~~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
|++|++ .||||+|||||.|+.|.++ +.+|+||.+.+|.++++|+++|.+|.+|+|++++++++.+++|+|+.+++++
T Consensus 249 vl~G~~-~VdeS~LTGES~pv~K~~g--~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~ 325 (723)
T 3j09_A 249 VVEGES-YVDESMISGEPVPVLKSKG--DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVV 325 (723)
T ss_dssp EEECCE-EEECHHHHCCSSCEEECTT--CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHH
T ss_pred EEECCe-EEecccccCCCcceeecCC--CeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 999986 8999999999999999988 7899999999999999999999999999999999999999999999999875
No 11
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=84.05 E-value=1.4 Score=35.40 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=31.0
Q ss_pred CCeEEEEECCEEEEEEcCCcccCcEEEecCCCeeecc
Q psy8121 165 EHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLPAD 201 (285)
Q Consensus 165 ~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G~~iPaD 201 (285)
...+.+.++|+...+.+.+|.+||.|.+..|..++.|
T Consensus 102 ~Hp~~v~~~g~~~w~~A~eLk~GD~v~~~~~~~~~~~ 138 (186)
T 2jmz_A 102 DHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINLD 138 (186)
T ss_dssp TCEEEEEETTEEEEEEGGGCCTTSEEEEECSSSEEEE
T ss_pred CCEEEEeCCCeEEEEEhhcCCCCCEEEecccCCccce
Confidence 4677888999999999999999999999876656554
No 12
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=78.75 E-value=2.8 Score=33.58 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=29.3
Q ss_pred CCeEEEEECCEEEEEEcCCcccCcEEEecCCCeee
Q psy8121 165 EHKFSVIRQGEVKQISVGDIVVGDICQIKYGDLLP 199 (285)
Q Consensus 165 ~~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G~~iP 199 (285)
.+.+.+.++|+...+.+.+|.+||.|.+..++..|
T Consensus 92 ~H~~~v~~~g~~~~~~A~eLk~GD~v~v~~~~~~~ 126 (185)
T 2lcj_A 92 DHPVLVYENGRFIEKRAFEVKEGDKVLVSELELVE 126 (185)
T ss_dssp SSEEEEEETTEEEEEEGGGCCTTCEEEECCCCCSC
T ss_pred CCEEEEecCCeEEEEEHHHCCCCCEEEEccccccc
Confidence 35677888999999999999999999998766444
No 13
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=52.65 E-value=30 Score=23.31 Aligned_cols=32 Identities=19% Similarity=0.114 Sum_probs=24.5
Q ss_pred CeEEEEECCEEEEEEc---CCcccCcEEEecCCCe
Q psy8121 166 HKFSVIRQGEVKQISV---GDIVVGDICQIKYGDL 197 (285)
Q Consensus 166 ~~~~V~rdg~~~~i~~---~~lv~GDiv~l~~G~~ 197 (285)
..++|-.+|..++++. .+..|||-|.++.|--
T Consensus 15 ~~A~vd~~Gv~r~V~l~Lv~~~~vGD~VLVH~GfA 49 (75)
T 2z1c_A 15 PVAVVDFGGVKREVRLDLMPDTKPGDWVIVHTGFA 49 (75)
T ss_dssp TEEEEEETTEEEEEECTTSTTCCTTCEEEEETTEE
T ss_pred CEEEEEcCCEEEEEEEEEeCCCCCCCEEEEecchh
Confidence 4566777888888874 4677899999998843
No 14
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=52.62 E-value=20 Score=27.21 Aligned_cols=30 Identities=13% Similarity=0.072 Sum_probs=24.2
Q ss_pred CeEEEEEC--CEEEEEEcCCcccCcEEEecCC
Q psy8121 166 HKFSVIRQ--GEVKQISVGDIVVGDICQIKYG 195 (285)
Q Consensus 166 ~~~~V~rd--g~~~~i~~~~lv~GDiv~l~~G 195 (285)
+.+.+... ++...+.+.+|++||.|.+..|
T Consensus 72 H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~ 103 (145)
T 1at0_A 72 HLVSVWQPESQKLTFVFADRIEEKNQVLVRDV 103 (145)
T ss_dssp CEEEEEETTTTEEEEEEGGGCCTTCEEEEECT
T ss_pred CEEEEecCCCCcEEEEEHHHCcCCCEEEEecC
Confidence 55666665 4578899999999999998876
No 15
>4e2u_A PHO RADA intein; HINT-fold, unknown function; 1.58A {Pyrococcus horikoshii} PDB: 2lqm_A 4e2t_A*
Probab=41.14 E-value=23 Score=27.60 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=22.3
Q ss_pred CeEEEEECCEEEEEEcCCcccCcEEEecCC
Q psy8121 166 HKFSVIRQGEVKQISVGDIVVGDICQIKYG 195 (285)
Q Consensus 166 ~~~~V~rdg~~~~i~~~~lv~GDiv~l~~G 195 (285)
+...+.+++. ..+.+.+|.+||.|.+..|
T Consensus 97 Hp~~~~~~~~-~w~~a~~L~~Gd~l~~~~g 125 (168)
T 4e2u_A 97 HPVLLFRDGL-QWVPAAEVKPGDVVVGVRN 125 (168)
T ss_dssp CEEEEESSSE-EEEEGGGCCTTCEEEEEET
T ss_pred CcEEEEcCCC-EEEEHHHCCCCCEEEeccC
Confidence 3445555554 7889999999999998877
No 16
>3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis}
Probab=36.15 E-value=13 Score=35.48 Aligned_cols=27 Identities=33% Similarity=0.632 Sum_probs=20.9
Q ss_pred EEcCCcccCcEEEe-cCCCeeec-cEEEE
Q psy8121 179 ISVGDIVVGDICQI-KYGDLLPA-DGCLI 205 (285)
Q Consensus 179 i~~~~lv~GDiv~l-~~G~~iPa-Dg~il 205 (285)
|.-.+|.+||.|.| ++||+||- .+++.
T Consensus 374 i~~~di~iGD~V~V~rAGdVIP~V~~vv~ 402 (615)
T 3sgi_A 374 IKRKGVLIGDTVVIRKAGDVIPEVLGPVV 402 (615)
T ss_dssp TTTTCCCBTCEEEEECCSSSSCCCCEECT
T ss_pred HHHcCCCCCCEEEEEEcCCCccceeeecc
Confidence 34567999999999 67999994 55554
No 17
>2cw8_A Endonuclease PI-pkoii; hydrolase; 2.50A {Thermococcus kodakarensis} PDB: 2cw7_A
Probab=34.67 E-value=45 Score=31.21 Aligned_cols=29 Identities=21% Similarity=0.493 Sum_probs=24.6
Q ss_pred CeEEEEECCEEEEEEcCCcccCcEEEecC
Q psy8121 166 HKFSVIRQGEVKQISVGDIVVGDICQIKY 194 (285)
Q Consensus 166 ~~~~V~rdg~~~~i~~~~lv~GDiv~l~~ 194 (285)
+.+.+.+||+...+++.+|.+||.|.+..
T Consensus 96 H~~l~~~~g~~~~~~a~elk~GD~v~~~~ 124 (537)
T 2cw8_A 96 HSLFSVRNGELVEVTGDELKPGDLVAVPR 124 (537)
T ss_dssp CEEEEEETTEEEEEETTTCCTTCEEEEES
T ss_pred ceEEEEECCEEEEEEhhcCCCCCEEEEee
Confidence 55667788999999999999999998843
No 18
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=33.59 E-value=32 Score=25.93 Aligned_cols=21 Identities=24% Similarity=0.476 Sum_probs=16.8
Q ss_pred EEEEcCCcccCcEEEecCCCe
Q psy8121 177 KQISVGDIVVGDICQIKYGDL 197 (285)
Q Consensus 177 ~~i~~~~lv~GDiv~l~~G~~ 197 (285)
..|+..++.|||+|..+.|..
T Consensus 61 ~~V~~~~l~pGDLvFf~~~~~ 81 (135)
T 2k1g_A 61 KSVSRSNLRTGDLVLFRAGST 81 (135)
T ss_dssp EEECGGGCCTTEEEEEEETTT
T ss_pred cEecHHHccCCcEEEECCCCC
Confidence 457788999999999976543
No 19
>4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli}
Probab=33.39 E-value=12 Score=35.52 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=19.4
Q ss_pred cCCcccCcEEEe-cCCCeee-ccEEE
Q psy8121 181 VGDIVVGDICQI-KYGDLLP-ADGCL 204 (285)
Q Consensus 181 ~~~lv~GDiv~l-~~G~~iP-aDg~i 204 (285)
-.+|.+||.|.| ++||+|| .++++
T Consensus 366 ~~di~iGD~V~V~rAGdVIP~I~~Vv 391 (586)
T 4glx_A 366 RLGLRIGDKVVIRRAGDVIPQVVNVV 391 (586)
T ss_dssp HHTCEETCEEEEEEETTTEEEEEEEC
T ss_pred hcCCCcCCEEEEEECCCcCccceeee
Confidence 368999999999 7899999 44444
No 20
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=30.85 E-value=16 Score=35.28 Aligned_cols=25 Identities=24% Similarity=0.440 Sum_probs=19.3
Q ss_pred EcCCcccCcEEEe-cCCCeee-ccEEE
Q psy8121 180 SVGDIVVGDICQI-KYGDLLP-ADGCL 204 (285)
Q Consensus 180 ~~~~lv~GDiv~l-~~G~~iP-aDg~i 204 (285)
.-.+|.+||.|.| ++||+|| ..+++
T Consensus 365 ~~~di~iGD~V~V~rAGdvIP~i~~vv 391 (671)
T 2owo_A 365 ERLGLRIGDKVVIRRAGDVIPQVVNVV 391 (671)
T ss_dssp HHHTCCBTCEEEEEEETTTEEEEEEEC
T ss_pred HHcCCCCCCEEEEEECCCcccceeccc
Confidence 3567999999988 7899999 44433
No 21
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=29.45 E-value=19 Score=34.86 Aligned_cols=20 Identities=35% Similarity=0.577 Sum_probs=17.2
Q ss_pred EcCCcccCcEEEe-cCCCeee
Q psy8121 180 SVGDIVVGDICQI-KYGDLLP 199 (285)
Q Consensus 180 ~~~~lv~GDiv~l-~~G~~iP 199 (285)
.-.+|.+||.|.| ++||+||
T Consensus 363 ~~~di~iGD~V~V~rAGdvIP 383 (667)
T 1dgs_A 363 EELDIRIGDWVLVHKAGGVIP 383 (667)
T ss_dssp HHTTCBSSCEEEEEEETTTEE
T ss_pred HHcCCCCCCEEEEEECCCcch
Confidence 4567889999988 7899999
No 22
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=28.99 E-value=25 Score=26.36 Aligned_cols=21 Identities=24% Similarity=0.476 Sum_probs=16.7
Q ss_pred EEEEcCCcccCcEEEecCCCe
Q psy8121 177 KQISVGDIVVGDICQIKYGDL 197 (285)
Q Consensus 177 ~~i~~~~lv~GDiv~l~~G~~ 197 (285)
..++..++.|||+|....|..
T Consensus 61 ~~v~~~~l~pGDLvff~~~~~ 81 (136)
T 2jyx_A 61 KSVSRSNLRTGDLVLFRAGST 81 (136)
T ss_dssp EECCTTTCCTTEEEEEECSSS
T ss_pred eEcchHhCCCCCEEEECCCCC
Confidence 456778999999999987653
No 23
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=28.62 E-value=54 Score=21.78 Aligned_cols=23 Identities=22% Similarity=0.476 Sum_probs=14.5
Q ss_pred EEEECCEEEEEEc--CCcccCcEEEe
Q psy8121 169 SVIRQGEVKQISV--GDIVVGDICQI 192 (285)
Q Consensus 169 ~V~rdg~~~~i~~--~~lv~GDiv~l 192 (285)
.+.|+|+.. ++. ..|.+||++.+
T Consensus 45 ~I~R~~~~~-~p~~~~~l~~GD~l~v 69 (86)
T 3jxo_A 45 AIVRGGVLV-VPRGDTEILSGDKLYV 69 (86)
T ss_dssp EEEETTEEE-CCCTTCBCCTTCEEEE
T ss_pred EEEECCEEE-CCCCCCEECCCCEEEE
Confidence 456888765 343 34667777765
No 24
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=28.49 E-value=47 Score=27.52 Aligned_cols=29 Identities=21% Similarity=0.239 Sum_probs=21.4
Q ss_pred CeEEEEE-CCEEEEEEc-------CCcccCcEEEecC
Q psy8121 166 HKFSVIR-QGEVKQISV-------GDIVVGDICQIKY 194 (285)
Q Consensus 166 ~~~~V~r-dg~~~~i~~-------~~lv~GDiv~l~~ 194 (285)
..++|++ ||+....+. .++.|||.|.|..
T Consensus 166 ~~v~VI~~nG~v~~~~~a~Wn~~~~~l~PG~~I~Vp~ 202 (236)
T 3p42_A 166 NNVMVITPEGETVVAPVALWNKRHVEPPPGSQLWLGF 202 (236)
T ss_dssp SEEEEECTTSCEEEEECSSTTCCCEECCTTCEEEECB
T ss_pred ccEEEEeCCCCEEeccccccccCCCCCCCCCEEEEeC
Confidence 5677776 787777663 3799999997754
No 25
>2ot2_A Hydrogenase isoenzymes formation protein HYPC; beta barrel, chaperone; NMR {Escherichia coli K12} SCOP: b.40.14.1
Probab=27.27 E-value=73 Score=22.17 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=22.9
Q ss_pred eEEEEECCEEEEEEcCC---------cccCcEEEecCCCe
Q psy8121 167 KFSVIRQGEVKQISVGD---------IVVGDICQIKYGDL 197 (285)
Q Consensus 167 ~~~V~rdg~~~~i~~~~---------lv~GDiv~l~~G~~ 197 (285)
.++|-.+|..+.|+..- +.|||-|.++.|--
T Consensus 16 ~A~Vd~~Gv~r~V~l~Lv~~~~~~~~~~vGD~VLVH~GfA 55 (90)
T 2ot2_A 16 QAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFA 55 (90)
T ss_dssp EEEEECSSSEEEEECTTTCSBCTTSCBCTTCEEEEETTEE
T ss_pred cEEEEcCCeEEEEEEeeeeccCCCCCCCCCCEEEEecChh
Confidence 36666778778787543 46899999998843
No 26
>2j58_A WZA, outer membrane lipoprotein WZA; membrane protein; 2.26A {Escherichia coli} PDB: 2w8i_A 2w8h_A*
Probab=26.58 E-value=35 Score=30.19 Aligned_cols=29 Identities=24% Similarity=0.253 Sum_probs=22.7
Q ss_pred CeEEEEECCEEEEEEcC------------CcccCcEEEecC
Q psy8121 166 HKFSVIRQGEVKQISVG------------DIVVGDICQIKY 194 (285)
Q Consensus 166 ~~~~V~rdg~~~~i~~~------------~lv~GDiv~l~~ 194 (285)
..+.+.|+|+...++.. .|.+||+|.|.+
T Consensus 191 ~~V~l~R~g~~~~idl~~ll~~g~~~~~~~L~~GD~I~Vp~ 231 (359)
T 2j58_A 191 RNVVLTHNGKDTKISLYALMQKGDLTQNHLLYHGDILFIPS 231 (359)
T ss_dssp TCEEEEETTEEEEECHHHHHTTCBGGGCCBCCTTCEEEECB
T ss_pred ceEEEEECCeEEEEEHHHHhhcCCcccceeccCCCeEEEee
Confidence 57889999998777643 378999998865
No 27
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=26.44 E-value=2.4e+02 Score=25.98 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=19.6
Q ss_pred HhcCCCCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHHHHhhhc
Q psy8121 66 DTFGSNTIPPKPPKTFLTLVWEALQDVTLIILEIAALVSLGLSFY 110 (285)
Q Consensus 66 ~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ll~~~ai~s~~~~~~ 110 (285)
++||-|+... ...+...++...+.+++..-+++.+++++
T Consensus 151 ~~~Gfnk~t~------~~f~~D~~k~~~l~~vi~~pl~~~~~~ii 189 (482)
T 4aw6_A 151 EKHGFNQQTL------GFFMKDAIKKFVVTQCILLPVSSLLLYII 189 (482)
T ss_dssp HHTTCBCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899996433 22344555554444444343444444444
No 28
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=25.49 E-value=1e+02 Score=21.88 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=19.6
Q ss_pred EEECCEEEEEEcCCcccCcEEEe-----cCCCeeeccEEEE
Q psy8121 170 VIRQGEVKQISVGDIVVGDICQI-----KYGDLLPADGCLI 205 (285)
Q Consensus 170 V~rdg~~~~i~~~~lv~GDiv~l-----~~G~~iPaDg~il 205 (285)
+.-.|+.-. +.+||++.+ .+|+.|-.| +++
T Consensus 5 i~~gGkQyk-----V~~Gd~i~vekl~~~~G~~v~~~-VLl 39 (101)
T 3v2d_V 5 VKTGGKQYR-----VEPGLKLRVEKLDAEPGATVELP-VLL 39 (101)
T ss_dssp EEETTEEEE-----ECTTCEEEESCCSCCTTCEEEEC-EEE
T ss_pred EEeCCEEEE-----EeCCCEEEECCcCCCCCCEEEEE-EEE
Confidence 334555443 457888887 478888888 654
No 29
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.30 E-value=32 Score=21.82 Aligned_cols=25 Identities=20% Similarity=0.408 Sum_probs=21.2
Q ss_pred CCcccCcEEEecCCCeeeccEEEEe
Q psy8121 182 GDIVVGDICQIKYGDLLPADGCLIQ 206 (285)
Q Consensus 182 ~~lv~GDiv~l~~G~~iPaDg~il~ 206 (285)
.++.|||.|.+..|..--..|++.+
T Consensus 6 ~~f~~GD~V~V~~Gpf~g~~G~V~e 30 (59)
T 2e6z_A 6 SGFQPGDNVEVCEGELINLQGKILS 30 (59)
T ss_dssp SSCCTTSEEEECSSTTTTCEEEECC
T ss_pred ccCCCCCEEEEeecCCCCCEEEEEE
Confidence 4688999999999988878888864
No 30
>3ne0_A Resuscitation promoting factor interacting protei; cell WALL, peptidoglycan, hydrolase; 1.00A {Mycobacterium tuberculosis} PDB: 3pbc_A 3s0q_A 2xiv_A*
Probab=20.60 E-value=44 Score=27.28 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=15.7
Q ss_pred EEEEcCCcccCcEEEecCC
Q psy8121 177 KQISVGDIVVGDICQIKYG 195 (285)
Q Consensus 177 ~~i~~~~lv~GDiv~l~~G 195 (285)
..|+..++.|||+|....|
T Consensus 152 ~~V~~~~lqpGDLvFf~~g 170 (214)
T 3ne0_A 152 RKIPSSQMRRGDVIFYGPN 170 (214)
T ss_dssp EEEEGGGCCTTCEEEESGG
T ss_pred ceechhhCCCCCEEEecCC
Confidence 4567889999999999754
No 31
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=20.54 E-value=39 Score=25.46 Aligned_cols=18 Identities=17% Similarity=0.076 Sum_probs=14.8
Q ss_pred EEEEcCCcccCcEEEecC
Q psy8121 177 KQISVGDIVVGDICQIKY 194 (285)
Q Consensus 177 ~~i~~~~lv~GDiv~l~~ 194 (285)
..|+..++.|||+|....
T Consensus 83 ~~v~~~~~~pGDlvff~~ 100 (142)
T 3gt2_A 83 QKILPQQARKGDLIFYGP 100 (142)
T ss_dssp EEECGGGCCTTCEEEESG
T ss_pred ceechhhCCCCCEEEeCC
Confidence 356778999999999864
No 32
>2in0_A Endonuclease PI-MTUI; hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 2l8l_A 2in9_A 2in8_A 3ifj_A 3igd_A
Probab=20.32 E-value=55 Score=24.20 Aligned_cols=19 Identities=16% Similarity=0.275 Sum_probs=16.4
Q ss_pred EEEcCCcccCcEEEecCCC
Q psy8121 178 QISVGDIVVGDICQIKYGD 196 (285)
Q Consensus 178 ~i~~~~lv~GDiv~l~~G~ 196 (285)
.+.+.+|.+||.|.+..|.
T Consensus 81 w~~a~~L~~Gd~v~~~~~~ 99 (139)
T 2in0_A 81 WRAAGELRKGDRVAVRDVE 99 (139)
T ss_dssp EEEGGGCCTTCEEEEECTT
T ss_pred cEEHHHCCCCCEEEeCCCc
Confidence 4689999999999998775
Done!