BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8135
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q62448|IF4G2_MOUSE Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus
GN=Eif4g2 PE=1 SV=2
Length = 906
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/293 (49%), Positives = 196/293 (66%), Gaps = 19/293 (6%)
Query: 3 RWIPPSALRRDALTPEN-------VQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSS 55
+WIP + RRD + N DA FRKVR +LNKLTPEKFDKL +LL + + S
Sbjct: 49 KWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESK 108
Query: 56 KILKGVILLIFEKALHETKYTSMYARLCKRLTEQAPNFEPP--------DESCTFKKHLL 107
ILKGVILLI +KAL E KY+S+YA+LC RL E APNF+ P +S TF++ L+
Sbjct: 109 LILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLI 168
Query: 108 WVCKNEFENRSRATEAFGN--LPLSPDDEDRRQLAKQKMLGNIKFIGELGKHEIVTESIL 165
++EFENR+R + + PL P++E++R +AK KMLGNIKFIGELGK +++ ESIL
Sbjct: 169 SKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGELGKLDLIHESIL 228
Query: 166 HTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTVQTS 225
H CI+ LL K ++VQ KD+ E+LECLCQIM+T G LD E+ + LM+QYF+RM ++ S
Sbjct: 229 HKCIKTLLEKKKRVQL-KDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYFARMCSLMLS 287
Query: 226 TPHLPLRIRFMLQDVEDLRRNNWVPRQANNPEKPVPINQIIEEDHDPVNFILP 278
LP RIRF+LQD +LR ++WVPR+A P INQI ++ + +P
Sbjct: 288 K-ELPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQIRQDAVKDLGVFIP 339
>sp|Q5R7J9|IF4G2_PONAB Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/293 (49%), Positives = 196/293 (66%), Gaps = 19/293 (6%)
Query: 3 RWIPPSALRRDALTPEN-------VQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSS 55
+WIP + RRD + N DA FRKVR +LNKLTPEKFDKL +LL + + S
Sbjct: 49 KWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESK 108
Query: 56 KILKGVILLIFEKALHETKYTSMYARLCKRLTEQAPNFEPP--------DESCTFKKHLL 107
ILKGVILLI +KAL E KY+S+YA+LC RL E APNF+ P +S TF++ L+
Sbjct: 109 LILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLI 168
Query: 108 WVCKNEFENRSRATEAFGN--LPLSPDDEDRRQLAKQKMLGNIKFIGELGKHEIVTESIL 165
++EFENR+R + + PL P++E++R +AK KMLGNIKFIGELGK +++ ESIL
Sbjct: 169 SKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGELGKLDLIHESIL 228
Query: 166 HTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTVQTS 225
H CI+ LL K ++VQ KD+ E+LECLCQIM+T G LD E+ + LM+QYF+RM ++ S
Sbjct: 229 HKCIKTLLEKKKRVQL-KDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYFARMCSLMLS 287
Query: 226 TPHLPLRIRFMLQDVEDLRRNNWVPRQANNPEKPVPINQIIEEDHDPVNFILP 278
LP RIRF+LQD +LR ++WVPR+A P INQI ++ + +P
Sbjct: 288 K-ELPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQIRQDAVKDLGVFIP 339
>sp|P78344|IF4G2_HUMAN Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens
GN=EIF4G2 PE=1 SV=1
Length = 907
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/293 (49%), Positives = 196/293 (66%), Gaps = 19/293 (6%)
Query: 3 RWIPPSALRRDALTPEN-------VQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSS 55
+WIP + RRD + N DA FRKVR +LNKLTPEKFDKL +LL + + S
Sbjct: 49 KWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESK 108
Query: 56 KILKGVILLIFEKALHETKYTSMYARLCKRLTEQAPNFEPP--------DESCTFKKHLL 107
ILKGVILLI +KAL E KY+S+YA+LC RL E APNF+ P +S TF++ L+
Sbjct: 109 LILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLI 168
Query: 108 WVCKNEFENRSRATEAFGN--LPLSPDDEDRRQLAKQKMLGNIKFIGELGKHEIVTESIL 165
++EFENR+R + + PL P++E++R +AK KMLGNIKFIGELGK +++ ESIL
Sbjct: 169 SKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGELGKLDLIHESIL 228
Query: 166 HTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTVQTS 225
H CI+ LL K ++VQ KD+ E+LECLCQIM+T G LD E+ + LM+QYF+RM ++ S
Sbjct: 229 HKCIKTLLEKKKRVQL-KDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYFARMCSLMLS 287
Query: 226 TPHLPLRIRFMLQDVEDLRRNNWVPRQANNPEKPVPINQIIEEDHDPVNFILP 278
LP RIRF+LQD +LR ++WVPR+A P INQI ++ + +P
Sbjct: 288 K-ELPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQIRQDAVKDLGVFIP 339
>sp|Q95L46|IF4G2_BOVIN Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/293 (49%), Positives = 196/293 (66%), Gaps = 19/293 (6%)
Query: 3 RWIPPSALRRDALTPEN-------VQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSS 55
+WIP + RRD + N DA FRKVR +LNKLTPEKFDKL +LL + + S
Sbjct: 49 KWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESK 108
Query: 56 KILKGVILLIFEKALHETKYTSMYARLCKRLTEQAPNFEPP--------DESCTFKKHLL 107
ILKGVILLI +KAL E KY+S+YA+LC RL E APNF+ P +S TF++ L+
Sbjct: 109 LILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLI 168
Query: 108 WVCKNEFENRSRATEAFGN--LPLSPDDEDRRQLAKQKMLGNIKFIGELGKHEIVTESIL 165
++EFENR+R + + PL P++E++R +AK KMLGNIKFIGELGK +++ ESIL
Sbjct: 169 SKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGELGKLDLIHESIL 228
Query: 166 HTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTVQTS 225
H CI+ LL K ++VQ KD+ E+LECLCQIM+T G LD E+ + LM+QYF+RM ++ S
Sbjct: 229 HKCIKTLLEKKKRVQL-KDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYFARMCSLMLS 287
Query: 226 TPHLPLRIRFMLQDVEDLRRNNWVPRQANNPEKPVPINQIIEEDHDPVNFILP 278
LP RIRF+LQD +LR ++WVPR+A P INQI ++ + +P
Sbjct: 288 K-ELPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQIRQDAVKDLGVFIP 339
>sp|P79398|IF4G2_RABIT Eukaryotic translation initiation factor 4 gamma 2 OS=Oryctolagus
cuniculus GN=EIF4G2 PE=2 SV=1
Length = 907
Score = 251 bits (640), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 145/293 (49%), Positives = 196/293 (66%), Gaps = 19/293 (6%)
Query: 3 RWIPPSALRRDALTPEN-------VQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSS 55
+WIP + RRD + N DA FRKVR +LNKLTPEKFDKL +LL + + S
Sbjct: 49 KWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESK 108
Query: 56 KILKGVILLIFEKALHETKYTSMYARLCKRLTEQAPNFEPP--------DESCTFKKHLL 107
ILKGVILLI +KAL E KY+S+YA+LC RL E APNF+ P +S TF++ L+
Sbjct: 109 LILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLI 168
Query: 108 WVCKNEFENRSRATEAFGN--LPLSPDDEDRRQLAKQKMLGNIKFIGELGKHEIVTESIL 165
++EFENR+R + + PL P++E++R +AK KMLGNIKFIGELGK +++ ESIL
Sbjct: 169 SKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGELGKLDLIHESIL 228
Query: 166 HTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTVQTS 225
H CI+ LL K ++VQ +D+ E+LECLCQIM+T G LD E+ + LM+QYF+RM ++ S
Sbjct: 229 HKCIKTLLEKKKRVQL-QDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYFARMCSLMLS 287
Query: 226 TPHLPLRIRFMLQDVEDLRRNNWVPRQANNPEKPVPINQIIEEDHDPVNFILP 278
LP RIRF+LQD +LR ++WVPR+A P INQI ++ + +P
Sbjct: 288 K-ELPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQIRQDAVKDLGVFIP 339
>sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens
GN=EIF4G1 PE=1 SV=4
Length = 1599
Score = 174 bits (442), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 158/263 (60%), Gaps = 34/263 (12%)
Query: 25 FRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYARLCK 84
FR+VR +LNKLTP+ F +L + QL +++ + LKGVI LIFEKA+ E ++ YA +C+
Sbjct: 761 FRRVRSILNKLTPQMFQQLMKQVTQLAIDTEERLKGVIDLIFEKAISEPNFSVAYANMCR 820
Query: 85 RLTE-QAPNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLPLSPDD---------- 133
L + P E P + F+K LL C+ EFE E F D+
Sbjct: 821 CLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERGRL 880
Query: 134 ----EDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSENL 189
E+ R +A+++ LGNIKFIGEL K +++TE+I+H C+ +LL N D E+L
Sbjct: 881 KEELEEARDIARRRSLGNIKFIGELFKLKMLTEAIMHDCVVKLL-------KNHD-EESL 932
Query: 190 ECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTV----QTSTPHLPLRIRFMLQDVEDLRR 245
ECLC+++ T G+ LD EK + M+QYF++M+ + +TS+ RIRFMLQDV DLR
Sbjct: 933 ECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIIKEKKTSS-----RIRFMLQDVLDLRG 987
Query: 246 NNWVPRQANNPEKPVPINQIIEE 268
+NWVPR+ + + P I+QI +E
Sbjct: 988 SNWVPRRGD--QGPKTIDQIHKE 1008
>sp|Q6NZJ6|IF4G1_MOUSE Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus
GN=Eif4g1 PE=1 SV=1
Length = 1600
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 158/263 (60%), Gaps = 34/263 (12%)
Query: 25 FRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYARLCK 84
FR+VR +LNKLTP+ F +L + QL +++ + LKGVI LIFEKA+ E ++ YA +C+
Sbjct: 765 FRRVRSILNKLTPQMFQQLMKQVTQLAIDTEERLKGVIDLIFEKAISEPNFSVAYANMCR 824
Query: 85 RLTE-QAPNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLPLSPDD---------- 133
L + P E P + F+K LL C+ EFE E F D+
Sbjct: 825 CLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERGRL 884
Query: 134 ----EDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSENL 189
E+ R +A+++ LGNIKFIGEL K +++TE+I+H C+ +LL N D E+L
Sbjct: 885 KEELEEARDIARRRSLGNIKFIGELFKLKMLTEAIMHDCVVKLL-------KNHD-EESL 936
Query: 190 ECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTV----QTSTPHLPLRIRFMLQDVEDLRR 245
ECLC+++ T G+ LD K + M+QYF++M+ + +TS+ RIRFMLQDV DLR+
Sbjct: 937 ECLCRLLTTIGKDLDFAKAKPRMDQYFNQMEKIIKEKKTSS-----RIRFMLQDVLDLRQ 991
Query: 246 NNWVPRQANNPEKPVPINQIIEE 268
+NWVPR+ + + P I+QI +E
Sbjct: 992 SNWVPRRGD--QGPKTIDQIHKE 1012
>sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1
OS=Arabidopsis thaliana GN=EIF(ISO)4G1 PE=1 SV=1
Length = 780
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 154/254 (60%), Gaps = 16/254 (6%)
Query: 7 PSALRRDALTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIF 66
P + RR L+ EN D + V+ +LNKLTPEK+D L L++ + S+ ILKGVI LIF
Sbjct: 201 PWSARRGNLS-EN--DRVLKTVKGILNKLTPEKYDLLKGQLIESGITSADILKGVITLIF 257
Query: 67 EKALHETKYTSMYARLCKRLTEQAPNF---EPPDESCTFKKHLLWVCKNEFENRSRATEA 123
+KA+ E + MYA+LC + +Q P F EP D+ TFK+ LL +C+ FE S+ E
Sbjct: 258 DKAVLEPTFCPMYAKLCSDINDQLPTFPPAEPGDKEITFKRVLLNICQEAFEGASQLREE 317
Query: 124 FGNLPLSPDDE----DRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKV 179
+ +PD E D+ +L K K LGNI+ IGEL K ++V E I+H +QELL + KV
Sbjct: 318 LRQMS-APDQEAERNDKEKLLKLKTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADEKV 376
Query: 180 QTNKDVSENLECLCQIMKTCGRILDSE-KGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQ 238
EN+E +C KT G+ LD K + + + YF R++ + + P L LR+RFM+Q
Sbjct: 377 CP---AEENVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQAL-SKNPQLELRLRFMVQ 432
Query: 239 DVEDLRRNNWVPRQ 252
++ D+R N WVPR+
Sbjct: 433 NIIDMRSNGWVPRR 446
>sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens
GN=EIF4G3 PE=1 SV=2
Length = 1585
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 166/285 (58%), Gaps = 35/285 (12%)
Query: 4 WIPPSALRRDALTPENVQDAT-FRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVI 62
W P A PEN++ FRKVR +LNKLTP+ F++L + L +++ + LKGVI
Sbjct: 733 WKPSQKRDSQADDPENIKTQELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVI 792
Query: 63 LLIFEKALHETKYTSMYARLCKRL-TEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRAT 121
L+FEKA+ E ++ YA +C+ L T + P + P + F+K LL C+ EFE
Sbjct: 793 DLVFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNTVNFRKLLLNRCQKEFEKDKADD 852
Query: 122 EAF----GNLPLSPDDEDRRQL----------AKQKMLGNIKFIGELGKHEIVTESILHT 167
+ F L + E+R +L A+++ +GNIKFIGEL K +++TE+I+H
Sbjct: 853 DVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHD 912
Query: 168 CIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTV----Q 223
C+ +LL N D E+LECLC+++ T G+ LD EK + M+QYF++M+ + +
Sbjct: 913 CVVKLL-------KNHD-EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERK 964
Query: 224 TSTPHLPLRIRFMLQDVEDLRRNNWVPRQANNPEKPVPINQIIEE 268
TS+ RIRFMLQDV DLR NWV R+A+ + P I QI +E
Sbjct: 965 TSS-----RIRFMLQDVIDLRLCNWVSRRAD--QGPKTIEQIHKE 1002
>sp|Q80XI3|IF4G3_MOUSE Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus
GN=Eif4g3 PE=1 SV=2
Length = 1579
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 166/285 (58%), Gaps = 35/285 (12%)
Query: 4 WIPPSALRRDALTPENVQDAT-FRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVI 62
W P A PE+++ FRKVR +LNKLTP+ F++L + L +++ + LKGVI
Sbjct: 728 WKPSQKRDSHADDPESIKTQELFRKVRSILNKLTPQMFNQLMKQVSALTVDTEERLKGVI 787
Query: 63 LLIFEKALHETKYTSMYARLCKRL-TEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRAT 121
L+FEKA+ E ++ YA +C+ L T + P + P + F+K LL C+ EFE
Sbjct: 788 DLVFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNTVNFRKLLLNRCQKEFEKDKADD 847
Query: 122 EAF----GNLPLSPDDEDRRQL----------AKQKMLGNIKFIGELGKHEIVTESILHT 167
+ F L + E+R +L A+++ +GNIKFIGEL K +++TE+I+H
Sbjct: 848 DVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHD 907
Query: 168 CIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTV----Q 223
C+ +LL N D E+LECLC+++ T G+ LD EK + M+QYF++M+ + +
Sbjct: 908 CVVKLL-------KNHD-EESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERK 959
Query: 224 TSTPHLPLRIRFMLQDVEDLRRNNWVPRQANNPEKPVPINQIIEE 268
TS+ RIRFMLQDV DLR NWV R+A+ + P I QI +E
Sbjct: 960 TSS-----RIRFMLQDVIDLRLCNWVSRRAD--QGPKTIEQIHKE 997
>sp|Q84PB3|IF4G1_ORYSJ Eukaryotic translation initiation factor isoform 4G-1 OS=Oryza
sativa subsp. japonica GN=Os04g0499300 PE=2 SV=2
Length = 793
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 147/254 (57%), Gaps = 14/254 (5%)
Query: 7 PSALRRDALTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIF 66
P + RR L+ +D + V+ +LNKLTPEKFD L L++ + ++ ILK VI LIF
Sbjct: 193 PWSARRGNLSE---KDRVLKTVKGILNKLTPEKFDLLKGQLMESGITTADILKDVISLIF 249
Query: 67 EKALHETKYTSMYARLCKRLTEQAPNF---EPPDESCTFKKHLLWVCKNEFENRSRATEA 123
EKA+ E + MYA+LC L E+ P+F EP + TFK+ LL C+ FE
Sbjct: 250 EKAVFEPTFCPMYAQLCSDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGAESLRAE 309
Query: 124 FGNLPLSPDDE----DRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKV 179
L PD E D+ ++ K + LGNI+ IGEL K ++V E I+H +QELL
Sbjct: 310 IAKL-TGPDQEMERRDKERIVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSGPDK 368
Query: 180 QTNKDVSENLECLCQIMKTCGRILD-SEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQ 238
+ + EN+E +CQ T G+ LD + K + + + YF +MK + T+ P R+RFM++
Sbjct: 369 KACPE-EENVEAICQFFNTIGKQLDENPKSRRINDTYFIQMKELTTNLQLAP-RLRFMVR 426
Query: 239 DVEDLRRNNWVPRQ 252
DV DLR NNWVPR+
Sbjct: 427 DVVDLRSNNWVPRR 440
>sp|O82233|IF4G2_ARATH Eukaryotic translation initiation factor isoform 4G-2
OS=Arabidopsis thaliana GN=EIF(ISO)4G2 PE=1 SV=1
Length = 747
Score = 164 bits (415), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 148/254 (58%), Gaps = 16/254 (6%)
Query: 7 PSALRRDALTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIF 66
P + +R AL+ +D + V+ +LNKLTPEK++ L L+ + S+ ILK VI LIF
Sbjct: 160 PWSAKRGALSD---KDRVVKSVKGILNKLTPEKYELLKGQLIDAGITSADILKEVIQLIF 216
Query: 67 EKALHETKYTSMYARLCKRLTEQAPNF---EPPDESCTFKKHLLWVCKNEFENRSRATEA 123
E A+ + + MYA LC + Q P+F EP + TFK+ LL C+ FE + E
Sbjct: 217 ENAILQPTFCEMYALLCFDINGQLPSFPSEEPGGKEITFKRVLLNNCQEAFEGAGKLKEE 276
Query: 124 FGNLPLSPDDE----DRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKV 179
+ +PD E D+ ++AK + LGNI+ IGEL K ++V E I+H +QELL + K
Sbjct: 277 IRQM-TNPDQEMERMDKEKMAKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGDDTKA 335
Query: 180 QTNKDVSENLECLCQIMKTCGRIL-DSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQ 238
+ ++E LCQ T G+ L DS + +G+ + YF R+K + P L LR+RFM+Q
Sbjct: 336 CPAEG---DVEALCQFFITIGKQLDDSPRSRGINDTYFGRLKEL-ARHPQLELRLRFMVQ 391
Query: 239 DVEDLRRNNWVPRQ 252
+V DLR N WVPR+
Sbjct: 392 NVVDLRANKWVPRR 405
>sp|Q41583|IF4G2_WHEAT Eukaryotic translation initiation factor isoform 4G-2 OS=Triticum
aestivum PE=2 SV=1
Length = 787
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 148/255 (58%), Gaps = 16/255 (6%)
Query: 7 PSALRRDALTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIF 66
P + RR L+ +D + V+ +LNKLTPEKFD L +LL + ++ ILK VI LIF
Sbjct: 195 PWSARRGNLSE---KDRVLKTVKGILNKLTPEKFDLLKGELLDSGITTADILKDVISLIF 251
Query: 67 EKALHETKYTSMYARLCKRLTEQAPNF---EPPDESCTFKKHLLWVCKNEFENRSRATEA 123
EKA+ E + MYA+LC L + P F EP + TFK+ LL C+ FE
Sbjct: 252 EKAVFEPTFCPMYAQLCSELNDNLPKFPSEEPGGKEITFKRVLLNNCQEAFEGADSLRVE 311
Query: 124 FGNLPLSPDDE----DRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKV 179
+L PD E D+ ++ K + LGNI+ IGEL K ++V E I+H ++ELL ++K
Sbjct: 312 IASL-TGPDQEMEKRDKERIFKLRTLGNIRLIGELLKQKMVPEKIVHHIVKELLGSDKKA 370
Query: 180 QTNKDVSENLECLCQIMKTCGRILD-SEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQ 238
++ E++E +CQ T G+ LD + K + + + YF ++ + + P L R +FM++
Sbjct: 371 CPDE---EHVEAICQFFNTIGKQLDENPKSRRINDTYFVHLREL-VANPQLTPRSKFMVR 426
Query: 239 DVEDLRRNNWVPRQA 253
D+ DLR NNWVPR+A
Sbjct: 427 DLIDLRSNNWVPRRA 441
>sp|Q03387|IF4G1_WHEAT Eukaryotic translation initiation factor isoform 4G-1 OS=Triticum
aestivum PE=1 SV=2
Length = 788
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 148/255 (58%), Gaps = 16/255 (6%)
Query: 7 PSALRRDALTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIF 66
P + RR L+ +D + V+ +LNKLTPEKFD L LL + ++ ILK VI LIF
Sbjct: 196 PWSARRGNLSE---KDRVLKTVKGILNKLTPEKFDLLKGQLLDSGITTADILKDVISLIF 252
Query: 67 EKALHETKYTSMYARLCKRLTEQAPNF---EPPDESCTFKKHLLWVCKNEFENRSRATEA 123
EKA+ E + MYA+LC L + P F EP + TFK+ LL C+ FE
Sbjct: 253 EKAVFEPTFCPMYAQLCSELNDNLPTFPSEEPGGKEITFKRVLLNNCQEAFEGADSLRVE 312
Query: 124 FGNLPLSPDDE----DRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKV 179
+L PD E D+ ++ K + LGNI+ IGEL K ++V E I+H ++ELL ++K
Sbjct: 313 IASL-TGPDQEMEKRDKERIFKLRTLGNIRLIGELLKQKMVPEKIVHHIVKELLGSDKKA 371
Query: 180 QTNKDVSENLECLCQIMKTCGRILD-SEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQ 238
++ E++E +CQ T G+ LD + K + + + YF +++ + + P L R +FM++
Sbjct: 372 CPDE---EHVEAICQFFNTIGKQLDENPKSRRINDTYFVQIREL-VANPQLTPRSKFMVR 427
Query: 239 DVEDLRRNNWVPRQA 253
D+ DLR NNWVPR+A
Sbjct: 428 DLIDLRSNNWVPRRA 442
>sp|Q6K641|IF4G2_ORYSJ Eukaryotic translation initiation factor isoform 4G-2 OS=Oryza
sativa subsp. japonica GN=Os02g0611500 PE=2 SV=1
Length = 780
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 144/241 (59%), Gaps = 15/241 (6%)
Query: 21 QDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYA 80
++ + V+ +LNKLTPEKFD L L++ + ++ ILK VI LIFEKA+ E + MYA
Sbjct: 204 KERVLKTVKGILNKLTPEKFDLLKGQLIEAGITTADILKDVISLIFEKAVLEPTFCPMYA 263
Query: 81 RLCKRLTEQAPNF---EPPDESCTFKKHLLWVCKNEFEN----RSRATEAFGNLPLSPDD 133
+LC L E+ P+F EP + TFK+ LL C+ FE RS + G L +
Sbjct: 264 QLCFDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGADNLRSEVNKLTG-LDQEMER 322
Query: 134 EDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNK-DVSENLECL 192
D+ +L K + LGNI+ +GEL K ++V E I+H +QELL ++N+ EN+E +
Sbjct: 323 RDKERLVKLRTLGNIRLVGELLKQKMVPEKIVHHIVQELL----GSESNRCPAEENVEAI 378
Query: 193 CQIMKTCGRILD-SEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNWVPR 251
CQ T G+ LD + K + + YF+R+K + T++ L R+RFM +DV DLR N WVPR
Sbjct: 379 CQFFNTIGKQLDENPKSRRFNDVYFNRLKDLTTNS-QLASRLRFMARDVLDLRSNQWVPR 437
Query: 252 Q 252
+
Sbjct: 438 R 438
>sp|G5CEW6|IF4G_WHEAT Eukaryotic translation initiation factor 4G OS=Triticum aestivum PE=1
SV=1
Length = 1488
Score = 156 bits (394), Expect = 2e-37, Method: Composition-based stats.
Identities = 105/285 (36%), Positives = 163/285 (57%), Gaps = 22/285 (7%)
Query: 21 QDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYA 80
+ A R+++ +LNKLTP+ FDKL + + ++++++ L GVI IF+KAL E + MYA
Sbjct: 879 EQAKQRQLKAILNKLTPQNFDKLFEQVKEVNIDNVSTLTGVISQIFDKALMEPTFCEMYA 938
Query: 81 RLCKRLTEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRA------TEAFGNLPLSPDD- 133
C L P+F +E TFK+ LL C+ EFE R TE G + + ++
Sbjct: 939 NFCSHLAGALPDFSEDNEKITFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEER 998
Query: 134 EDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSENLECLC 193
E++R A+++MLGNI+ IGEL K ++TE I+H CI++LL + N D EN+E LC
Sbjct: 999 EEKRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGNYQ----NPD-EENIEALC 1053
Query: 194 QIMKTCGRILDSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNWVP-RQ 252
++M T G ++D K + M+ YF RM+ + TS + R+RF+L+D DLR+N W R+
Sbjct: 1054 KLMSTIGEMIDHPKAKEHMDAYFDRMRNLSTSQ-LISSRVRFLLRDSIDLRKNKWQQRRK 1112
Query: 253 ANNPEKPVPINQ-IIEEDH-------DPVNFILPHRNNGMKEYSS 289
+ P+K +++ +E H PV LP R +Y S
Sbjct: 1113 VDGPKKIDEVHRDAAQERHAQSSRSRGPVVSSLPRRGAPSMDYGS 1157
>sp|B9FXV5|IF4G_ORYSJ Eukaryotic translation initiation factor 4G OS=Oryza sativa subsp.
japonica GN=Os07g0555200 PE=2 SV=2
Length = 1792
Score = 152 bits (384), Expect = 3e-36, Method: Composition-based stats.
Identities = 97/252 (38%), Positives = 150/252 (59%), Gaps = 15/252 (5%)
Query: 21 QDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYA 80
++A R+++ +LNKLTP+ F+KL + + ++++++ L GVI IF+KAL E + MYA
Sbjct: 1179 EEAKQRQLKAILNKLTPQNFEKLFEKVKEVNIDNVATLTGVISQIFDKALMEPTFCEMYA 1238
Query: 81 RLCKRLTEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRA------TEAFGNLPLSPDD- 133
C L P+F +E TFK+ LL C+ EFE R TE G + + ++
Sbjct: 1239 NFCFHLAGALPDFSEDNEKITFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEER 1298
Query: 134 EDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSENLECLC 193
E++R A+++MLGNI+ IGEL K ++TE I+H CI++LL + N D EN+E LC
Sbjct: 1299 EEKRIRARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGNYQ----NPD-EENIEALC 1353
Query: 194 QIMKTCGRILDSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNWVPRQA 253
++M T G ++D K + M+ YF M + TS L R+RFML+D DLR+N W +Q
Sbjct: 1354 KLMSTIGEMIDHAKAKEHMDAYFDIMLKLSTSQ-QLSSRVRFMLRDSIDLRKNKW--QQR 1410
Query: 254 NNPEKPVPINQI 265
E P I+++
Sbjct: 1411 RKVEGPKKIDEV 1422
>sp|Q76E23|IF4G_ARATH Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana
GN=EIF4G PE=1 SV=2
Length = 1727
Score = 144 bits (364), Expect = 6e-34, Method: Composition-based stats.
Identities = 96/258 (37%), Positives = 144/258 (55%), Gaps = 21/258 (8%)
Query: 21 QDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYA 80
+ A R+++ +LNKLTP+ F+KL + + ++++++ L GVI IF+KAL E + MYA
Sbjct: 1092 EQAKQRQLKSILNKLTPQNFEKLFEQVKSVNIDNAVTLSGVISQIFDKALMEPTFCEMYA 1151
Query: 81 RLCKRLTEQAPNFEPPDESCTFKKHLLWVCKNEFENR-------SRATEAFGNLPLSPDD 133
C L+ P+F E TFK+ LL C+ EFE SR E +
Sbjct: 1152 DFCFHLSGALPDFNENGEKITFKRLLLNKCQEEFERGEKEEEEASRVAEEGQVEQTEEER 1211
Query: 134 EDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSENLECLC 193
E++R +++MLGNI+ IGEL K ++TE I+H CIQ+LL N+ EN+E LC
Sbjct: 1212 EEKRLQVRRRMLGNIRLIGELYKKRMLTEKIMHACIQKLLGYNQDPH-----EENIEALC 1266
Query: 194 QIMKTCGRILDSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNWVPR-Q 252
++M T G ++D K + M+ YF +MK + + L R+RFML + DLR+N W R +
Sbjct: 1267 KLMSTIGVMIDHNKAKFQMDGYFEKMKML-SCKQELSSRVRFMLINAIDLRKNKWQERMK 1325
Query: 253 ANNPEKPVPINQIIEEDH 270
P+K IEE H
Sbjct: 1326 VEGPKK-------IEEVH 1336
>sp|Q10475|IF4G_SCHPO Eukaryotic translation initiation factor 4 gamma
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif471 PE=1 SV=1
Length = 1403
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 150/280 (53%), Gaps = 43/280 (15%)
Query: 15 LTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDL-----NSSKILKGVILLIFEKA 69
L PE VQ RKV+ LNK+T EKFDK+SD +L++ + N + LK VI L FEKA
Sbjct: 1003 LPPEVVQ----RKVKGSLNKMTLEKFDKISDQILEIAMQSRKENDGRTLKQVIQLTFEKA 1058
Query: 70 LHETKYTSMYARLCKRLTEQ-----------APNFEPPDESCTFKKHLLWVCKNEFENRS 118
E +++MYAR +++ + N +P F+K+LL C+ +FE
Sbjct: 1059 TDEPNFSNMYARFARKMMDSIDDSIRDEGVLDKNNQPVRGGLLFRKYLLSRCQEDFERGW 1118
Query: 119 RATEAFGNLPLSPDDE-----DRRQLA---KQKMLGNIKFIGELGKHEIVTESILHTCIQ 170
+A NLP E D +A K++ LG ++FIGEL K +++E I+H CI+
Sbjct: 1119 KA-----NLPSGKAGEAEIMSDEYYVAAAIKRRGLGLVRFIGELFKLSMLSEKIMHECIK 1173
Query: 171 ELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDS-EKGQGLMNQYFSRMKTVQTSTPHL 229
LL E +E LC+++ T G +D+ EKG M+ Y RM+T+ T P+L
Sbjct: 1174 RLL-----GNVTDPEEEEIESLCRLLMTVGVNIDATEKGHAAMDVYVLRMETI-TKIPNL 1227
Query: 230 PLRIRFMLQDVEDLRRNNWVPRQANNPEK-PVPINQIIEE 268
P RI+FML DV D R+N W + N EK P I +I EE
Sbjct: 1228 PSRIKFMLMDVMDSRKNGWAVK--NEVEKGPKTIAEIHEE 1265
>sp|P41110|IF4G1_RABIT Eukaryotic translation initiation factor 4 gamma 1 OS=Oryctolagus
cuniculus GN=EIF4G1 PE=1 SV=1
Length = 1402
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 143/264 (54%), Gaps = 38/264 (14%)
Query: 25 FRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHE--TKYTSMYARL 82
FR+VR +LNKLTP+ F +L + QL +++ KG + + +++ S + L
Sbjct: 567 FRRVRSILNKLTPQMFQQLMKQVTQLAIDTEGASKGSLTSSLRRPFQNPTSQWPSQHVPL 626
Query: 83 CKRLTEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLPLSPDDE-------- 134
++ E P + F+K LL C+ EFE E F D+
Sbjct: 627 PH--GAESATTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERER 684
Query: 135 ------DRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSEN 188
+ R +A++ LGNIKFIGEL K +++TE+I+H C+ +LL + E+
Sbjct: 685 LKEELEEARDIARRCSLGNIKFIGELFKLKMLTEAIMHDCVVKLL---------RHDEES 735
Query: 189 LECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTV----QTSTPHLPLRIRFMLQDVEDLR 244
LE LC+++ T G+ LD EK + M+QYF++M+ + +TS+ RIRFMLQDV DLR
Sbjct: 736 LEFLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIIKEKKTSS-----RIRFMLQDVLDLR 790
Query: 245 RNNWVPRQANNPEKPVPINQIIEE 268
++NWVPR+ + + P I+QI +E
Sbjct: 791 QSNWVPRRGD--QGPKTIDQIHKE 812
>sp|Q553R3|IF4G_DICDI Eukaryotic translation initiation factor 4 gamma OS=Dictyostelium
discoideum GN=eif4g PE=3 SV=1
Length = 1377
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 150/287 (52%), Gaps = 53/287 (18%)
Query: 3 RWIPPSALRRDALTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDL-NSSKILKGV 61
RW+P + +AL + RK +LNK+TPEKFD L+++LL+L + + K+ KG
Sbjct: 754 RWVP---TKVNAL---DDSQKVLRKANFILNKITPEKFDVLTEELLELGIVDDEKVHKGT 807
Query: 62 ILLIFEKALHETKYTSMYARLCKRLTE--------------------QAPNF-----EPP 96
I LIF+KAL+E+K+ +MY LCK++ E + N+ +
Sbjct: 808 IDLIFDKALNESKFCTMYTNLCKKIFEFEKVKKEIAKRAVFEKIGVIETENYHKMSNKQR 867
Query: 97 DE-------SCTFKKHLLWVCKNEFENRSRATEAFGNLP--LSPDD----EDRRQLAKQK 143
DE F+ LL C+ E+E E +P L P++ E+ + +++
Sbjct: 868 DEFDQEHNVKAVFRTLLLSTCQKEYE--KIPFETVDKVPEDLKPEEKTDFEEGQFKERKR 925
Query: 144 MLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRIL 203
+ G IKFIGEL K ++++E I+H + L+ ++Q ++ LEC C+++ G+ L
Sbjct: 926 IFGLIKFIGELFKQQMLSEKIVHGIMVSLI---GELQRPSEIK--LECFCKLLSIVGKTL 980
Query: 204 D-SEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNWV 249
+E+ + YF RM+ + ++ L RIRF++Q+V DL+ +NW
Sbjct: 981 SQNEQASKYLTSYFQRMQQLVDNSQTLSQRIRFLIQNVMDLKNSNWT 1027
>sp|C7G046|Y6969_DICDI von Willebrand factor A domain-containing protein DDB_G0286969
OS=Dictyostelium discoideum GN=DDB_G0286969 PE=4 SV=1
Length = 2079
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 127/230 (55%), Gaps = 14/230 (6%)
Query: 25 FRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYARLCK 84
+K + LN++T + + L ++ +L + + LK + ++FEKA+ + KY+++YA L
Sbjct: 1317 LKKFKFNLNRITMDTYSSLIKNIDELKVPDEEALKSISKILFEKAIIDQKYSAVYAILAG 1376
Query: 85 RLTEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLPLSPDD-EDRRQLAKQK 143
L P F + K+ +L C+ EF ++ G LS +D E++ + K++
Sbjct: 1377 HLDTTFPKF----AELSLKRAILDNCQTEFSAVVDKSKFEG---LSKEDLEEQEFIIKRR 1429
Query: 144 MLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRIL 203
+LGNIKFIGEL KH ++ E + + +L+ K + D E++E L +I+ T G+ L
Sbjct: 1430 VLGNIKFIGELYKHGVLGEKVAKAIVVQLI---TKCEERLD-EESIEPLVKILNTIGKKL 1485
Query: 204 DSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNWVPRQA 253
D E + + YFS++ + ++ P + R RF+L D+ DLR N W P+ +
Sbjct: 1486 D-EVDKANTDLYFSKVTNI-SNNPVVTSRGRFILLDLIDLRANKWQPKNS 1533
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 11/174 (6%)
Query: 7 PSALRRDALTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIF 66
P +++R ++ +D + ++ +LN +P+ FD L++ ++S+ ILK VI LIF
Sbjct: 369 PLSIQRGIISG---KDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDVINLIF 425
Query: 67 EKALHETKYTSMYARLCKRLTEQAPNFEPPDESC---TFKKHLLWVCKNEFENRSRATEA 123
EK + E + S YA+LC L + F P D C TFK+ L C+ FE+
Sbjct: 426 EKVVAEPAFCSTYAQLCTYLNQNLTPFPPEDCDCEEITFKQALSNKCQEIFESAHTVCSE 485
Query: 124 FGNLPLSPDDE----DRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELL 173
G L + D E D+ ++ K + LGNI FI L K +++T I+ +Q ++
Sbjct: 486 IGKL-IGQDREMEQRDKERVVKLETLGNINFIRALLKKKLITNKIIDHIVQAVM 538
>sp|P39935|IF4F1_YEAST Eukaryotic initiation factor 4F subunit p150 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF4631 PE=1
SV=2
Length = 952
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 143/302 (47%), Gaps = 43/302 (14%)
Query: 3 RWIPPSA-------LRRDALTPENVQDATFRKVRELLNKLTPEKFDKLSDDLLQLD---- 51
RW+P L D T +D RK++ LLNKLT E FD +S ++L +
Sbjct: 578 RWVPKFKSKKTEKKLAPDGKTELLDKDEVERKMKSLLNKLTLEMFDAISSEILAIANISV 637
Query: 52 -LNSSKILKGVILLIFEKALHETKYTSMYARLCKRLTEQAPNFEPPDESCTFKK------ 104
+ + LK VI IF KA E ++SMYA+LC ++ ++ N + DE+ K
Sbjct: 638 WETNGETLKAVIEQIFLKACDEPHWSSMYAQLCGKVVKEL-NPDITDETNEGKTGPKLVL 696
Query: 105 -HLLWVCKNEFEN--RSRATEAFGNLPLSPD--DED--RRQLAKQKMLGNIKFIGELGKH 157
+L+ C EF+ + PL P+ E+ AK++ LG ++FIG L +
Sbjct: 697 HYLVARCHAEFDKGWTDKLPTNEDGTPLEPEMMSEEYYAAASAKRRGLGLVRFIGFLYRL 756
Query: 158 EIVTESILHTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSE---------KG 208
++T ++ C + L+ K T+ E LE + +++ T G +++ +G
Sbjct: 757 NLLTGKMMFECFRRLM----KDLTDSPSEETLESVVELLNTVGEQFETDSFRTGQATLEG 812
Query: 209 QGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRN-NWVPRQANNPEKPVPINQIIE 267
L++ F + + T + RI+F L D+++LR + NW + +N P I QI E
Sbjct: 813 SQLLDSLFGILDNI-IQTAKISSRIKFKLIDIKELRHDKNWNSDKKDN--GPKTIQQIHE 869
Query: 268 ED 269
E+
Sbjct: 870 EE 871
>sp|P39936|IF4F2_YEAST Eukaryotic initiation factor 4F subunit p130 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF4632 PE=1
SV=1
Length = 914
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 47/304 (15%)
Query: 3 RWIPPSALRR--DALTPENV-----QDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSS 55
RWIP S +++ L P+ ++ RK++ LLNKLT E FD +S ++L + N S
Sbjct: 538 RWIPKSRVKKTEKKLAPDGKTELFDKEEVERKMKSLLNKLTLEMFDSISSEILDI-ANQS 596
Query: 56 K------ILKGVILLIFEKALHETKYTSMYARLCKRLTEQ-APNF-EPPDESCTFKK--- 104
K LK VI IF KA E ++SMYA+LC ++ + PN + +E K
Sbjct: 597 KWEDDGETLKIVIEQIFHKACDEPHWSSMYAQLCGKVVKDLDPNIKDKENEGKNGPKLVL 656
Query: 105 -HLLWVCKNEFE----NRSRATEAFGNLPLSP----DDEDRRQLAKQKMLGNIKFIGELG 155
+L+ C EFE ++ A E GN PL P D+ AK++ LG ++FIG L
Sbjct: 657 HYLVARCHEEFEKGWADKLPAGED-GN-PLEPEMMSDEYYIAAAAKRRGLGLVRFIGYLY 714
Query: 156 KHEIVTESILHTCIQELLPKNRKVQTNKDVSENLECLCQIMKTCGRILDSEK-------- 207
++T ++ C + L+ K N E LE + +++ T G + +K
Sbjct: 715 CLNLLTGKMMFECFRRLM----KDLNNDPSEETLESVIELLNTVGEQFEHDKFVTPQATL 770
Query: 208 -GQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRR-NNWVPRQANNPEKPVPINQI 265
G L++ F ++ + + RI+F L DV++LR +W A P I QI
Sbjct: 771 EGSVLLDNLFMLLQHI-IDGGTISNRIKFKLIDVKELREIKHW--NSAKKDAGPKTIQQI 827
Query: 266 IEED 269
+E+
Sbjct: 828 HQEE 831
>sp|Q7ZYB4|PAIP1_XENLA Polyadenylate-binding protein-interacting protein 1 OS=Xenopus
laevis GN=paip1 PE=1 SV=1
Length = 463
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 37/237 (15%)
Query: 28 VRELLNKLT--PEKFDKLS---DDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYARL 82
V++ LN LT P F+ D+L + + + L+ ++ LI+++A+ ++ ARL
Sbjct: 148 VQDFLNHLTEQPGSFEAEVFPFSDVLNNCVTTDESLQELVELIYQQAISVPNFSYTGARL 207
Query: 83 CKRLTEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLPLSPDDEDRRQLAKQ 142
C L+ N ++ F++ LL C+ EFE R +A + G A++
Sbjct: 208 CNYLSN---NLHINPQNQNFRQLLLKRCQTEFEKRDQAAKGDG-------------AARK 251
Query: 143 KMLGNIKFIGEL--------GKHEIVTESILHTCIQELLPKNRKVQTNKDVSENLECLCQ 194
+ + F+GEL K ++ IL + +QELL + +N V +NL C +
Sbjct: 252 QFHAFVLFLGELYLNLEIKGAKGQVTRAEILQSGLQELL---NSLFSNP-VDDNLMCAVK 307
Query: 195 IMKTCGRILDS---EKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNW 248
++K G +L+ EK M + RMK V + ++ ML + +LR +NW
Sbjct: 308 LLKLTGSVLEDAWKEKALSCMEEVMLRMKNVVLDA-NCSRDVKQMLLKLVELRSSNW 363
>sp|Q8SVP8|IF4G_ENCCU Probable eukaryotic translation initiation factor 4 gamma homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=EIF4G PE=3
SV=1
Length = 627
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 109/252 (43%), Gaps = 31/252 (12%)
Query: 19 NVQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSM 78
N +D + R N+LT + + +L + + + + +K + ++F+KA+ E +
Sbjct: 197 NRKDTCIEQARLEFNRLTAKNIGLVIKNLKAIRVGTIEEMKEIAKILFDKAISEPTFVKY 256
Query: 79 YARLCKRLTEQAPNFEPPDESCT---------------FKKHLLWVCKNEFENRSRAT-- 121
YA L L ++ + E T + W +E+E R +
Sbjct: 257 YALLVLDLKKEWQSEEEKTRDITQTVFFGTLLTLTLKTLENKERW--GDEYERRKEMSFE 314
Query: 122 EAFGNLPLSPDDEDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQT 181
E + E R + K++ LG I F+ L +++ ++ CI L+
Sbjct: 315 ERMAYEEKLEEAETERYIKKRRTLGTIDFLSSLYSLNVISYVHMNACINTLM-------- 366
Query: 182 NKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVE 241
D SEN+E LC +++ G L + +++ S + + S + RIR+M++ +
Sbjct: 367 KLDDSENVEVLCYLIENIGEKLVVSGKEHIISMVCSSLAQKKNSYTN---RIRYMIESLL 423
Query: 242 DLRRNNWVPRQA 253
D +R++W PR+A
Sbjct: 424 D-KRSSWKPREA 434
>sp|Q9H074|PAIP1_HUMAN Polyadenylate-binding protein-interacting protein 1 OS=Homo sapiens
GN=PAIP1 PE=1 SV=1
Length = 479
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 37/237 (15%)
Query: 28 VRELLNKLT--PEKFDKLSD---DLLQLDLNSSKILKGVILLIFEKALHETKYTSMYARL 82
V++ LN LT P F+ + + L + + L+ ++ LI+++A ++ M ARL
Sbjct: 162 VQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARL 221
Query: 83 CKRLTEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLPLSPDDEDRRQLAKQ 142
C L+ P +S F++ LL C+ E+E + +A + ++ ++
Sbjct: 222 CNYLSHHL-TISP--QSGNFRQLLLQRCRTEYEVKDQAAKG-------------DEVTRK 265
Query: 143 KMLGNIKFIGEL-------GKHEIVTES-ILHTCIQELLPKNRKVQTNKDVSENLECLCQ 194
+ + F+GEL G + VT + IL ++ELL + + +NL C +
Sbjct: 266 RFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELL----NALFSNPMDDNLICAVK 321
Query: 195 IMKTCGRILDS---EKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNW 248
++K G +L+ EKG+ M + R++ V + ++ ML + +LR +NW
Sbjct: 322 LLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDA-NCSRDVKQMLLKLVELRSSNW 377
>sp|Q8VE62|PAIP1_MOUSE Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus
GN=Paip1 PE=2 SV=1
Length = 400
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 37/237 (15%)
Query: 28 VRELLNKLT--PEKFDKLSD---DLLQLDLNSSKILKGVILLIFEKALHETKYTSMYARL 82
V++ LN LT P F+ + + L + + L+ ++ LI+++A ++ M ARL
Sbjct: 83 VQDFLNHLTEQPGSFETEIEQFAETLNGWVTTDDALQELVELIYQQATSIPNFSYMGARL 142
Query: 83 CKRLTEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLPLSPDDEDRRQLAKQ 142
C L+ P +S F++ LL C+ E+E + +A + ++ ++
Sbjct: 143 CNYLSHHL-TISP--QSGNFRQLLLQRCRTEYEAKDQAAKG-------------DEVTRK 186
Query: 143 KMLGNIKFIGEL-------GKHEIVTES-ILHTCIQELLPKNRKVQTNKDVSENLECLCQ 194
+ + F+GEL G + VT + IL ++ELL + + +NL C +
Sbjct: 187 RFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELL----NALFSNPMDDNLICAVK 242
Query: 195 IMKTCGRILDS---EKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRRNNW 248
++K G +L+ EKG+ M + R++ V + ++ ML + +LR +NW
Sbjct: 243 LLKLTGSVLEDTWKEKGKTDMEEIIQRIENVVLDA-NCSRDVKQMLLKLVELRSSNW 298
>sp|B7XJR9|IF4G_ENTBH Probable eukaryotic translation initiation factor 4 gamma homolog
OS=Enterocytozoon bieneusi (strain H348) GN=EIF4G PE=3
SV=1
Length = 578
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 35/263 (13%)
Query: 32 LNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYARLCKRLTEQAP 91
NK+T +K S ++L L +N+ +K + +F KA+ E + Y +L L
Sbjct: 163 FNKVTLDKISLFSKEILDLKINTVDEMKELASFVFVKAITEKAFLDTYTKLIGIL---KK 219
Query: 92 NFEPPDE-------SCTFKKHLLWVCKNEFENRSRATEAFGN---------LPLSPDDED 135
NF+ +E +C F L + K EN + + + + + E
Sbjct: 220 NFKCAEEKNMGKESTCFFASLLKLMMKKIEENHTFNRDIYIDKENKTEIEIEEEIENAEL 279
Query: 136 RRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVSENLECLCQI 195
R+L + + +G I F L K+ I + + + L T K SEN+E LC+I
Sbjct: 280 ARKLKRTQAIGAISFCVSLYKNSITGVANIKNTVNFL--------TKKPSSENIELLCEI 331
Query: 196 MKTCGRILDSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQDVEDLRR----NNWVPR 251
++ G L+ + + NQ ++T P + + I Q +E L+R NN +
Sbjct: 332 LRQGGPQLNINHSETV-NQILHYIETHNIYGPRMEIIIE---QTIEKLKREIKLNNVSTK 387
Query: 252 QANNPEKPVPINQIIEEDHDPVN 274
+N N I E+ +N
Sbjct: 388 SSNIFANLFISNTGIAENGKKIN 410
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 78 MYARLCKRLTEQAPNFEPPDES----CTFKKHLLWVCKNEFENRSRATEAFGNLPLSPDD 133
++ARLC L + P P DES TF++ L C+ E EN S TE +LPL D
Sbjct: 8 LFARLCVELFHELPPL-PSDESHGDITTFERLFLRKCRIELENASPKTE---HLPLVYVD 63
Query: 134 EDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELL 173
E + + ++ + E+ K+ +TE+ + IQ L+
Sbjct: 64 ETNY----YRFIKTVRVLAEVYKNSKITETTRKSMIQVLM 99
>sp|Q6PEE2|CTIF_MOUSE CBP80/20-dependent translation initiation factor OS=Mus musculus
GN=Ctif PE=1 SV=2
Length = 600
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 40/211 (18%)
Query: 49 QLDLNSSKILKGVILLIFEKALHETKYTSMYARLCKRLTEQAPNFEPPDESCTFKKHLLW 108
Q NS ++L ++ I++KA+ + + A+LC ++ E F+ LL
Sbjct: 403 QNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALFMV------EGTKFRSLLLN 456
Query: 109 VCKNEFENRSRATEAFGNLPLSPDDEDRRQLAKQKMLGNIKFIGEL--------GKHEIV 160
+ + +F R E+ +Q ++ LG I F+ E+ G+ V
Sbjct: 457 MLQKDFTVR----------------EELQQQDVERWLGFITFLCEVFGTMRSSTGEPFRV 500
Query: 161 TESILHTCIQELLPKNRKVQTNKDVSENLECLCQI-MKTCGRILDSEKGQGLMNQYFSRM 219
++TC++ELL ++DV E+ C + +++ GR+L+ E+ +M + +
Sbjct: 501 LVCPIYTCLRELL-------QSQDVKEDAVLCCSMELQSTGRLLE-EQLPEMMTELLASA 552
Query: 220 KTVQTSTPHLPLRIRFMLQDVEDLRRNNWVP 250
+ + P + R +L +V +L N+W P
Sbjct: 553 RD-KMLCPSESMLTRSLLLEVIELHANSWNP 582
>sp|O43310|CTIF_HUMAN CBP80/20-dependent translation initiation factor OS=Homo sapiens
GN=CTIF PE=1 SV=1
Length = 598
Score = 38.1 bits (87), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 40/211 (18%)
Query: 49 QLDLNSSKILKGVILLIFEKALHETKYTSMYARLCKRLTEQAPNFEPPDESCTFKKHLLW 108
Q NS ++L ++ I++KA+ + + A+LC ++ E F+ LL
Sbjct: 401 QNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCDKMALFMV------EGTKFRSLLLN 454
Query: 109 VCKNEFENRSRATEAFGNLPLSPDDEDRRQLAKQKMLGNIKFIGEL--------GKHEIV 160
+ + +F R E+ +Q ++ LG I F+ E+ G+ V
Sbjct: 455 MLQKDFTVR----------------EELQQQDVERWLGFITFLCEVFGTMRSSTGEPFRV 498
Query: 161 TESILHTCIQELLPKNRKVQTNKDVSENLECLCQI-MKTCGRILDSEKGQGLMNQYFSRM 219
++TC++ELL ++DV E+ C + +++ GR+L+ E+ +M + +
Sbjct: 499 LVCPIYTCLRELL-------QSQDVKEDAVLCCSMELQSTGRLLE-EQLPEMMTELLASA 550
Query: 220 KTVQTSTPHLPLRIRFMLQDVEDLRRNNWVP 250
+ + P + R +L +V +L N+W P
Sbjct: 551 RD-KMLCPSESMLTRSLLLEVIELHANSWNP 580
>sp|Q0V9S3|CTIF_XENTR CBP80/20-dependent translation initiation factor OS=Xenopus
tropicalis GN=ctif PE=2 SV=1
Length = 583
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 45/251 (17%)
Query: 14 ALTPENVQDATFRKVRELLNKLTPEKFD---KLSDDLL--QLDLNSSKILKGVILLIFEK 68
A+ N Q K+ E+LN + D KL+ + Q NS ++L ++ I++K
Sbjct: 346 AVESTNPQKTKMDKLIEILNSMRNNSSDVDYKLTTFMAEAQNSANSEEMLGEIVKTIYQK 405
Query: 69 ALHETKYTSMYARLCKRLTEQAPNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLP 128
A+ + + A+LC R+ E F+ LL + + +F R
Sbjct: 406 AVTDRSFAHTAAKLCDRMALFMV------EGTKFRSLLLNMLQKDFSIR----------- 448
Query: 129 LSPDDEDRRQLAKQKMLGNIKFIGE--------LGKHEIVTESILHTCIQELLPKNRKVQ 180
E+ + ++ LG I F+ E + + V ++TC++ELL
Sbjct: 449 -----EEMHRSDVERWLGFITFLCEVFGTMRSNMAEPFRVLVCPIYTCLRELL------- 496
Query: 181 TNKDVSENLECLCQI-MKTCGRILDSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFMLQD 239
++DV E+ C + +++ GR+L+ + + +M++ + + + P + R +L +
Sbjct: 497 QSEDVKEDAVLCCSMELQSAGRLLEDQLPE-MMSELLATARD-KMLCPSESMLTRSLLLE 554
Query: 240 VEDLRRNNWVP 250
V +L N+W P
Sbjct: 555 VIELHANSWNP 565
>sp|C4V8K5|IF4G_NOSCE Probable eukaryotic translation initiation factor 4 gamma homolog
OS=Nosema ceranae (strain BRL01) GN=EIF4G PE=3 SV=1
Length = 598
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 102/252 (40%), Gaps = 49/252 (19%)
Query: 20 VQDATFRKVRELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMY 79
++ ATF LNKLT ++ +L L++ + + K + LI KA++E +Y ++Y
Sbjct: 209 IEKATFE-----LNKLTNTNIKRIITNLKNLNIETIQQAKYLGNLIVFKAINEPQYCNLY 263
Query: 80 ARLCKRLTEQAPNFEPPDESCTFKKHLLWVC-----------------------KNEFEN 116
A + L + +F+ +E KK + KN ++N
Sbjct: 264 AMVVGALKK---DFKSKEELGLHKKQTAFFGTVLTSAMKVLEEKVEWADTKVLDKNLYKN 320
Query: 117 RSRATEAFGNLPLSPDDEDRRQLAKQKMLGNIKFIGELGKHEIVTESILHTCIQELLPKN 176
AF + E R L K+K LG + + +L +++T + + + E L
Sbjct: 321 AFEYERAF------EEQETERYLRKKKTLGAVNLLCDLYNLDVITLKHIQSRLNEFL--- 371
Query: 177 RKVQTNKDVSENLECLCQIMKTCGRILDSEKGQGLMNQYFSRMKTVQTSTPHLPLRIRFM 236
N + E +E L + ++ G + N S + + + R++F
Sbjct: 372 -----NIENEEVVEVLGKFIEKIGEKMYLNDKSDYANMICSYLDACKNKYSN---RVKFY 423
Query: 237 LQDVEDLRRNNW 248
+ DV D ++ NW
Sbjct: 424 IMDVLD-KKKNW 434
>sp|Q9HAU5|RENT2_HUMAN Regulator of nonsense transcripts 2 OS=Homo sapiens GN=UPF2 PE=1
SV=1
Length = 1272
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
Query: 148 IKFIGELGKHEIVTESILHTCIQELLPKNRKVQTNKDVS-ENLECLCQIMKTCGRIL 203
++FIGEL K ++ T++ C++ LL D S ++E C +++TCGR L
Sbjct: 667 VRFIGELTKFKMFTKNDTLHCLKMLL---------SDFSHHHIEMACTLLETCGRFL 714
>sp|Q83HH4|SYFB_TROW8 Phenylalanine--tRNA ligase beta subunit OS=Tropheryma whipplei
(strain TW08/27) GN=pheT PE=3 SV=1
Length = 961
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 29 RELLNKLTPEKFDKLSDDLLQLDLNSSKILKGVILLIFEKALHETKYTSMYARLCKRLTE 88
+E L+ + + + +DDL+ D N + L GVI + +TK R+
Sbjct: 341 KETLDTIDGRRLELHTDDLVVADANGALSLAGVIGGSRSRVTSDTK----------RILL 390
Query: 89 QAPNFEPPDESCTFKKHLLW 108
+A NF P D S + ++H L+
Sbjct: 391 EAGNFNPIDISLSSRRHKLY 410
>sp|Q55D17|NCBP1_DICDI Nuclear cap-binding protein subunit 1 OS=Dictyostelium discoideum
GN=ncbp1 PE=3 SV=1
Length = 772
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 14/69 (20%)
Query: 175 KNRKVQTNKDVSENLECLCQIMKTCGRILDSEKGQ--------------GLMNQYFSRMK 220
+ ++ + N +SE L +++K G IL SEK Q ++ +YF++MK
Sbjct: 695 QEKEFKLNTSISEQQLLLAELVKGLGSILSSEKYQLGASSKLLISGQLKSIIRKYFNQMK 754
Query: 221 TVQTSTPHL 229
V S P L
Sbjct: 755 PVIQSQPQL 763
>sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3
Length = 6885
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 7/49 (14%)
Query: 149 KFIGELGKHEIVTESILHTCIQELLP---KNRKVQTNKDVSENLECLCQ 194
KF+ E EI E+I+ +QE LP K ++ T +++SE L+CLCQ
Sbjct: 3472 KFVSE----EIEREAIILDNLQEELPEISKTKEAATTEELSELLDCLCQ 3516
>sp|Q752H7|SC61A_ASHGO Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SEC61 PE=3 SV=1
Length = 480
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Query: 91 PNFEPPDESCTFKKHLLWVCKNEFENRSRATEAFGNLPL----SPDDEDRRQLAKQKMLG 146
P P+ + + L+W + G +PL S + D Q + +
Sbjct: 17 PEVIAPERKVPYNQKLIWTAVSLL-----IFLVLGQIPLYGIVSSEGSDPLQWLRAMLAS 71
Query: 147 NIKFIGELGKHEIVTESILHTCIQ--ELLPKNRKVQTNKDVSENLECLCQIMKTCGR 201
N + ELG I+T S++ +Q +LL N + + ++++ + + +C I+ T G+
Sbjct: 72 NRGTLMELGVSPIITSSMIFQFLQGTQLLQVNLESKQDRELFQIAQKVCAIVLTLGQ 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,510,920
Number of Sequences: 539616
Number of extensions: 4735680
Number of successful extensions: 11478
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 11358
Number of HSP's gapped (non-prelim): 55
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)