BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8137
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P79398|IF4G2_RABIT Eukaryotic translation initiation factor 4 gamma 2 OS=Oryctolagus
cuniculus GN=EIF4G2 PE=2 SV=1
Length = 907
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 50/60 (83%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWL 74
++ C++ +FPKGMLLR+F + Y++EIIEEEAF W+E+I+ +PGKG+ALFQVN WL WL
Sbjct: 835 QVHCYNSNFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWL 894
>sp|Q5R7J9|IF4G2_PONAB Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 50/60 (83%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWL 74
++ C++ +FPKGMLLR+F + Y++EIIEEEAF W+E+I+ +PGKG+ALFQVN WL WL
Sbjct: 835 QVHCYNSNFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWL 894
>sp|P78344|IF4G2_HUMAN Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens
GN=EIF4G2 PE=1 SV=1
Length = 907
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 50/60 (83%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWL 74
++ C++ +FPKGMLLR+F + Y++EIIEEEAF W+E+I+ +PGKG+ALFQVN WL WL
Sbjct: 835 QVHCYNSNFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWL 894
>sp|Q95L46|IF4G2_BOVIN Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 50/60 (83%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWL 74
++ C++ +FPKGMLLR+F + Y++EIIEEEAF W+E+I+ +PGKG+ALFQVN WL WL
Sbjct: 835 QVHCYNSNFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWL 894
>sp|Q62448|IF4G2_MOUSE Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus
GN=Eif4g2 PE=1 SV=2
Length = 906
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 49/60 (81%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWL 74
++ C++ FPKGMLLR+F + Y++EIIEEEAF W+E+I+ +PGKG+ALFQVN WL WL
Sbjct: 834 QVHCYNSSFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWL 893
>sp|O73777|IF4G2_CHICK Eukaryotic translation initiation factor 4 gamma 2 (Fragment)
OS=Gallus gallus GN=EIF4G2 PE=2 SV=1
Length = 73
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 50/60 (83%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWL 74
++ C++ +FPKGMLLR+F + Y++EIIEEEAF W+E+I+ +PGKG+ALFQVN WL WL
Sbjct: 1 QVHCYNSNFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWL 60
>sp|Q6NZJ6|IF4G1_MOUSE Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus
GN=Eif4g1 PE=1 SV=1
Length = 1600
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDA-YPGKGEALFQVNAWLNW 73
+ +L P +L +F+ LY+ ++++E+AF W + A GKG AL V A+ NW
Sbjct: 1529 QALVVTLEQPANLLRMFFDALYDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFNW 1588
Query: 74 LAEAESEEEE 83
L EAE EE +
Sbjct: 1589 LREAEDEESD 1598
>sp|Q80XI3|IF4G3_MOUSE Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus
GN=Eif4g3 PE=1 SV=2
Length = 1579
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 24 PKGMLLRWFNNLYNLEIIEEEAFSKWRENISDA-YPGKGEALFQVNAWLNWLAEAESEEE 82
P +L +F+ LY+ E+I E+AF KW + A GKG AL V A+ WL EAE E E
Sbjct: 1518 PANLLRMFFDCLYDEEVISEDAFYKWESSKDPAEQAGKGVALKSVTAFFTWLREAEEESE 1577
Query: 83 E 83
+
Sbjct: 1578 D 1578
>sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens
GN=EIF4G3 PE=1 SV=2
Length = 1585
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 24 PKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYP-GKGEALFQVNAWLNWLAEAESEEE 82
P +L +F+ LY+ E+I E+AF KW + A GKG AL V A+ WL EAE E E
Sbjct: 1524 PANLLRMFFDCLYDEEVISEDAFYKWESSKDPAEQNGKGVALKSVTAFFTWLREAEEESE 1583
Query: 83 E 83
+
Sbjct: 1584 D 1584
>sp|P41110|IF4G1_RABIT Eukaryotic translation initiation factor 4 gamma 1 OS=Oryctolagus
cuniculus GN=EIF4G1 PE=1 SV=1
Length = 1402
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDA-YPGKGEALFQVNAWLNW 73
+ +L P +L +F+ LY+ ++++EEAF W + A GKG AL V A+ W
Sbjct: 1331 QALVVTLEQPANLLRMFFDALYDEDVVKEEAFYSWESSKDPAEQQGKGVALKSVTAFFKW 1390
Query: 74 LAEAESEEEE 83
L E E EE +
Sbjct: 1391 LREVEEEESD 1400
>sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens
GN=EIF4G1 PE=1 SV=4
Length = 1599
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 15 ELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDA-YPGKGEALFQVNAWLNW 73
+ +L P +L +F+ LY+ ++++E+AF W + A GKG AL V A+ W
Sbjct: 1529 QALVVTLEQPPNLLRMFFDALYDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFKW 1588
Query: 74 LAEAESEEE 82
L EAE E +
Sbjct: 1589 LREAEEESD 1597
>sp|P32501|EI2BE_YEAST Translation initiation factor eIF-2B subunit epsilon
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=GCD6 PE=1 SV=1
Length = 712
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 19 HSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWLAEAE 78
S P +L +LY+ +IIEE+ KW +N+S P E W+ WL A+
Sbjct: 646 QSFDKPDLILFSALVSLYDNDIIEEDVIYKWWDNVSTD-PRYDEVKKLTVKWVEWLQNAD 704
>sp|Q803N9|BZW1B_DANRE Basic leucine zipper and W2 domain-containing protein 1-B OS=Danio
rerio GN=bzw1b PE=2 SV=2
Length = 418
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 17 FCH-SLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDAYPGKGEALF--QVNAWLNW 73
FC+ ++HF K + LY ++++ EEA KW ++A+ KG+++F Q+ ++ W
Sbjct: 348 FCYDNIHFMK-TFQKMVLLLYKVDVLSEEAVLKW---FTEAHLAKGKSVFLEQMKTFVEW 403
Query: 74 LAEA 77
L A
Sbjct: 404 LKNA 407
>sp|Q64350|EI2BE_RAT Translation initiation factor eIF-2B subunit epsilon OS=Rattus
norvegicus GN=Eif2b5 PE=1 SV=2
Length = 716
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 35 LYNLEIIEEEAFSKW--RENISDAYPGKGEALF---QVNAWLNWLAEAESEEEEEE 85
Y LEI+ EE W + +I+D KG+ L Q+ ++ WL EAE E +++
Sbjct: 665 FYQLEILAEETILSWFSQRDITD----KGQQLRKNQQLQRFIQWLREAEEESSDDD 716
>sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris
GN=EIF5 PE=2 SV=1
Length = 443
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 32 FNNLYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWLAEAESEEEEE 84
LY+ +++EEEA W + + +++WL AESE +EE
Sbjct: 391 LKTLYDADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNAESESDEE 443
>sp|Q5ZL42|BZW2_CHICK Basic leucine zipper and W2 domain-containing protein 2 OS=Gallus
gallus GN=BZW2 PE=2 SV=1
Length = 414
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 35 LYNLEIIEEEAFSKWRENISDAYPGKGEALF--QVNAWLNWLAEAESE 80
Y +++ EEA KW + +A+ KG+++F Q+ ++ WL AE E
Sbjct: 367 FYKADVLSEEAILKWYK---EAHVAKGKSVFLDQMKKFVEWLQNAEEE 411
>sp|Q1LUC1|BZW2_DANRE Basic leucine zipper and W2 domain-containing protein 2 OS=Danio
rerio GN=bzw2 PE=2 SV=1
Length = 421
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 35 LYNLEIIEEEAFSKWRENISDAYPGKGEALF--QVNAWLNWLAEA 77
Y +++ EEA KW + DA+ KG+++F Q+ ++ WL A
Sbjct: 369 FYKADVVSEEAIMKWYK---DAHAAKGKSVFLEQMKKFVEWLQNA 410
>sp|Q94KE1|PMTA_ARATH Probable methyltransferase PMT10 OS=Arabidopsis thaliana
GN=At1g77260 PE=2 SV=1
Length = 655
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 13 PPELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKW--RENISDAYPGKG 61
PP+ + + +P+ WFNN+ + ++E++ W RE +PG G
Sbjct: 190 PPDGYKKPIQWPQSRDKIWFNNVPHTRLVEDKGGQNWIRREKDKFVFPGGG 240
>sp|P0C153|PTPA2_EMENI Serine/threonine-protein phosphatase 2A activator 2 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=rrd2 PE=3 SV=1
Length = 420
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 2 DPGPNTPPTATPPELFCHSLHFP 24
+P P TPP + PP+L HS P
Sbjct: 34 EPAPVTPPLSKPPDLSSHSYSRP 56
>sp|O87172|MALQ_THETH 4-alpha-glucanotransferase OS=Thermus thermophilus GN=malQ PE=1
SV=1
Length = 500
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 4 GPNTPPTATPPELFCHSLHFPKGMLLRWFNNLYNLEIIEEEAFSKWRENISDA 56
G T PP+ F + RW N LY +++E E FS W + A
Sbjct: 238 GRPTVVAGVPPDYFSETGQ-------RWGNPLYRWDVLEREGFSFWIRRLEKA 283
>sp|P55876|IF5_MAIZE Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2
SV=1
Length = 451
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 35 LYNLEIIEEEAFSKWRENISDAYPGKGEALFQVNAWLNWLAEAESEEEEEEE 86
LY+ +I++EE W N + A + + ++ WL AES+EE ++E
Sbjct: 401 LYDGDILDEETIVDWY-NDAVAAGKDSQVVKNAKPFVEWLQSAESDEEGDDE 451
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,050,720
Number of Sequences: 539616
Number of extensions: 1715153
Number of successful extensions: 10725
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 10605
Number of HSP's gapped (non-prelim): 106
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)