Query psy8139
Match_columns 1101
No_of_seqs 809 out of 5820
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 19:36:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jll_A NCAM2, neural cell adhe 100.0 3E-35 1E-39 340.1 43.6 361 452-895 1-374 (389)
2 2v5y_A Receptor-type tyrosine- 100.0 2.9E-33 9.9E-38 350.3 29.5 439 467-955 91-610 (731)
3 2nzi_A Titin; IG-domain, FNIII 100.0 2.5E-30 8.6E-35 287.8 35.7 285 451-783 3-292 (305)
4 2v5y_A Receptor-type tyrosine- 100.0 1.1E-29 3.9E-34 317.7 34.6 407 394-820 109-601 (731)
5 3b43_A Titin; I-SET IG fold, e 100.0 7.4E-29 2.5E-33 301.1 39.4 396 305-770 60-465 (570)
6 3b43_A Titin; I-SET IG fold, e 100.0 1.1E-28 3.6E-33 299.8 36.4 395 305-771 156-560 (570)
7 2jll_A NCAM2, neural cell adhe 100.0 2E-28 7E-33 282.7 35.8 307 405-776 62-380 (389)
8 3l5h_A Interleukin-6 receptor 100.0 1.2E-29 4.2E-34 310.1 12.5 458 457-986 8-569 (589)
9 2ec8_A MAST/stem cell growth f 99.9 2.1E-26 7.1E-31 277.1 24.4 320 304-642 78-413 (524)
10 1zlg_A Anosmin 1; insulin-like 99.9 2.6E-24 9E-29 265.1 40.1 469 315-943 132-666 (680)
11 1e07_A Carcinoembryonic antige 99.9 8.4E-24 2.9E-28 261.2 44.2 373 305-773 70-454 (642)
12 1e07_A Carcinoembryonic antige 99.9 4.3E-24 1.5E-28 263.7 39.8 376 305-770 163-545 (642)
13 3kld_A Contactin 4, axcam, BIG 99.9 1.5E-25 5.2E-30 257.8 24.6 314 305-639 61-382 (384)
14 3laf_A Deleted in colorectal c 99.9 3.2E-25 1.1E-29 257.2 25.8 317 305-642 76-403 (403)
15 3dmk_A DOWN syndrome cell adhe 99.9 1.9E-24 6.6E-29 274.8 33.8 389 305-771 305-703 (816)
16 1cs6_A Axonin-1; neural cell a 99.9 9.9E-25 3.4E-29 251.1 22.5 314 305-639 60-381 (382)
17 3dmk_A DOWN syndrome cell adhe 99.9 4.2E-23 1.4E-27 262.5 34.9 388 304-770 197-605 (816)
18 2ocw_A Polymeric-immunoglobuli 99.9 1.9E-22 6.4E-27 246.3 39.2 399 306-772 75-536 (585)
19 1bih_A Hemolin; insect immunit 99.9 3.6E-24 1.2E-28 247.6 22.6 318 304-638 60-394 (395)
20 3p3y_A Neurofascin; IG domains 99.9 1.3E-23 4.5E-28 243.7 26.8 321 305-640 72-403 (404)
21 2rik_A Titin; I-SET IG fold, p 99.9 1.2E-22 4.2E-27 223.0 32.1 223 405-639 60-283 (284)
22 2v5m_A Dscam; neurobiology SPL 99.9 9.2E-24 3.2E-28 243.5 23.6 311 304-638 57-387 (388)
23 3qs9_E FL cytokine receptor; i 99.9 4.5E-24 1.5E-28 254.3 20.1 298 306-642 103-416 (527)
24 1i1r_A GP130, interleukin-6 re 99.9 2.6E-22 8.8E-27 222.6 29.8 260 456-783 8-298 (303)
25 2rcj_C Light chain; immunoglob 99.9 6E-22 2.1E-26 238.1 34.4 347 305-664 69-449 (523)
26 1fnf_A Fibronectin; RGD, extra 99.9 5E-21 1.7E-25 218.8 38.7 349 347-778 1-362 (368)
27 3qs7_E FL cytokine receptor; i 99.9 1E-23 3.5E-28 244.4 16.1 304 306-647 103-421 (423)
28 2rik_A Titin; I-SET IG fold, p 99.9 5.3E-21 1.8E-25 209.9 36.3 270 450-770 3-273 (284)
29 3l5h_A Interleukin-6 receptor 99.9 1.9E-23 6.4E-28 255.2 18.3 409 307-779 158-585 (589)
30 2ocw_A Polymeric-immunoglobuli 99.9 5.4E-22 1.8E-26 242.2 30.1 315 307-642 186-548 (585)
31 2ec8_A MAST/stem cell growth f 99.9 4.8E-23 1.7E-27 247.7 18.6 315 305-645 167-515 (524)
32 3t1w_A Four-domain fibronectin 99.9 2.3E-20 7.9E-25 213.9 38.1 338 347-774 2-360 (375)
33 1z7z_I Intercellular adhesion 99.9 1.4E-21 4.7E-26 230.2 27.8 326 306-664 50-394 (450)
34 2q7n_A Leukemia inhibitory fac 99.9 3.1E-21 1.1E-25 223.5 29.2 390 307-783 54-483 (488)
35 2d9q_B Granulocyte colony-stim 99.9 9.7E-22 3.3E-26 219.0 21.7 267 458-783 6-304 (313)
36 1zlg_A Anosmin 1; insulin-like 99.9 3.1E-21 1.1E-25 237.6 27.8 321 601-995 220-621 (680)
37 3qs9_E FL cytokine receptor; i 99.9 2E-21 6.7E-26 231.5 24.0 294 310-640 195-510 (527)
38 3laf_A Deleted in colorectal c 99.9 1.8E-21 6.3E-26 225.5 22.3 300 404-770 75-390 (403)
39 1n26_A IL-6 receptor alpha cha 99.9 9.8E-21 3.4E-25 211.8 26.4 270 453-784 7-295 (325)
40 1i1r_A GP130, interleukin-6 re 99.9 4.5E-21 1.5E-25 212.5 23.2 266 558-906 14-302 (303)
41 2yd9_A Receptor-type tyrosine- 99.9 2.7E-21 9.4E-26 214.6 20.1 221 406-643 63-294 (304)
42 3t1w_A Four-domain fibronectin 99.9 4.4E-21 1.5E-25 219.9 22.4 290 598-986 53-348 (375)
43 3qs7_E FL cytokine receptor; i 99.9 3.2E-21 1.1E-25 223.5 21.2 236 406-664 103-350 (423)
44 1qz1_A Neural cell adhesion mo 99.9 7.7E-21 2.6E-25 209.4 22.6 224 405-640 61-290 (291)
45 2wim_A N-CAM 2, NCAM2, neural 99.9 7.3E-21 2.5E-25 209.6 19.8 223 406-642 60-286 (291)
46 2v5m_A Dscam; neurobiology SPL 99.9 5.6E-20 1.9E-24 211.8 26.2 293 404-770 57-378 (388)
47 2rcj_C Light chain; immunoglob 99.9 1.2E-19 4E-24 218.0 29.9 254 405-665 69-344 (523)
48 3lcy_A Titin; A-BAND, IG tande 99.8 1.2E-19 4.3E-24 186.7 25.1 191 450-640 5-196 (197)
49 2y25_A Myomesin; structural pr 99.8 4.6E-21 1.6E-25 214.0 15.1 224 406-640 61-315 (317)
50 1wio_A CD4, T-cell surface gly 99.8 4.4E-21 1.5E-25 218.8 14.4 270 304-638 65-361 (363)
51 3kld_A Contactin 4, axcam, BIG 99.8 4.7E-20 1.6E-24 211.9 23.1 296 405-770 61-372 (384)
52 1fnf_A Fibronectin; RGD, extra 99.8 6.8E-20 2.3E-24 209.4 24.1 289 598-986 52-346 (368)
53 3p3y_A Neurofascin; IG domains 99.8 3E-20 1E-24 215.3 20.7 299 406-770 73-392 (404)
54 1qgc_4 Protein (immunoglobulin 99.8 1.8E-20 6.2E-25 219.8 17.5 313 305-635 74-434 (438)
55 2d9q_B Granulocyte colony-stim 99.8 8.4E-20 2.9E-24 203.2 22.0 268 559-910 11-312 (313)
56 1bih_A Hemolin; insect immunit 99.8 6E-20 2.1E-24 212.0 21.6 301 404-770 60-385 (395)
57 2j8h_A Titin, connectin; cardi 99.8 2.2E-19 7.5E-24 185.0 23.0 189 451-639 3-196 (197)
58 2o26_X MAST/stem cell growth f 99.8 1.4E-19 4.8E-24 199.2 22.6 218 406-642 57-290 (290)
59 2a38_A Titin; Z1Z2, structural 99.8 1.9E-19 6.5E-24 184.9 22.1 185 451-638 4-193 (194)
60 3v2a_R Vascular endothelial gr 99.8 1.6E-21 5.5E-26 246.5 6.5 245 405-665 289-574 (772)
61 1cs6_A Axonin-1; neural cell a 99.8 1.5E-19 5.3E-24 207.6 21.6 294 405-770 60-371 (382)
62 3v2a_R Vascular endothelial gr 99.8 2.3E-20 7.9E-25 235.9 16.0 338 304-665 84-448 (772)
63 1z7z_I Intercellular adhesion 99.8 8.3E-20 2.9E-24 214.9 19.6 293 305-640 141-449 (450)
64 3ejj_X Macrophage colony-stimu 99.8 6.7E-19 2.3E-23 193.6 25.5 224 404-642 49-283 (289)
65 4fom_A Poliovirus receptor-rel 99.8 4.8E-20 1.6E-24 204.9 16.5 225 404-643 72-303 (308)
66 3r8q_A Fibronectin; heparin, F 99.8 3.2E-18 1.1E-22 188.3 30.7 264 346-773 19-283 (290)
67 1itb_B Type 1 interleukin-1 re 99.8 1.7E-19 5.8E-24 201.2 20.2 264 348-639 19-313 (315)
68 2y23_A Myomesin; structural pr 99.8 7.7E-19 2.6E-23 195.5 25.5 221 406-638 58-310 (312)
69 1wio_A CD4, T-cell surface gly 99.8 1.2E-19 4.1E-24 206.9 18.4 215 405-664 66-305 (363)
70 1ry7_B FGFR-3, fibroblast grow 99.8 3.3E-20 1.1E-24 208.8 13.6 234 405-644 60-331 (334)
71 3oq3_B IFN-alpha/beta binding 99.8 4.8E-19 1.6E-23 198.8 22.8 222 405-638 88-328 (329)
72 2yd9_A Receptor-type tyrosine- 99.8 4.9E-19 1.7E-23 196.4 22.6 210 450-664 4-229 (304)
73 4fqp_A Poliovirus receptor; im 99.8 1E-18 3.5E-23 194.6 24.9 223 404-642 77-306 (313)
74 2dfs_A Myosin-5A; myosin-V, in 99.8 6.2E-19 2.1E-23 220.6 25.5 136 38-203 767-902 (1080)
75 3mtr_A N-CAM-1, NCAM-1, neural 99.8 1.9E-18 6.6E-23 180.8 23.1 176 558-780 28-208 (215)
76 1qgc_4 Protein (immunoglobulin 99.8 4.4E-19 1.5E-23 207.9 20.2 253 405-665 74-368 (438)
77 2yd6_A PTPRD protein; hydrolas 99.8 3E-18 1E-22 178.8 24.3 189 451-642 5-206 (212)
78 4dep_C Interleukin-1 receptor 99.8 4.6E-19 1.6E-23 200.8 19.6 226 405-640 78-333 (349)
79 2yd1_A Tyrosine-protein phosph 99.8 3.1E-18 1.1E-22 178.8 23.8 189 450-645 4-205 (212)
80 2wim_A N-CAM 2, NCAM2, neural 99.8 5.7E-18 2E-22 186.3 27.0 262 451-770 3-273 (291)
81 3u83_A Poliovirus receptor-rel 99.8 1.5E-18 5.1E-23 195.0 21.0 221 404-645 90-325 (331)
82 2wv3_A Neuroplastin; igcam, me 99.8 8.8E-18 3E-22 171.9 23.3 178 452-639 3-189 (190)
83 2y25_A Myomesin; structural pr 99.8 1.6E-18 5.4E-23 193.4 19.3 268 449-770 4-304 (317)
84 2dfs_A Myosin-5A; myosin-V, in 99.8 1.3E-17 4.5E-22 208.7 29.3 145 3-179 759-905 (1080)
85 2iep_A Muscle-specific kinase 99.8 1.9E-18 6.3E-23 177.2 17.5 185 450-642 5-192 (192)
86 3rbs_A Myomesin-1; immunoglobu 99.8 5E-18 1.7E-22 175.8 20.8 178 452-638 3-205 (207)
87 2wng_A Tyrosine-protein phosph 99.8 5.1E-18 1.8E-22 190.3 22.5 221 404-632 72-311 (327)
88 2va4_A NCAM2, N-CAM 2, neural 99.8 1.3E-17 4.3E-22 170.9 23.1 181 452-638 2-191 (192)
89 1qz1_A Neural cell adhesion mo 99.8 1.8E-17 6.2E-22 182.3 26.0 266 452-770 2-279 (291)
90 2c5d_C AXL oncogene, tyrosine- 99.8 1E-17 3.5E-22 172.2 21.9 177 452-638 2-191 (195)
91 4dkd_C Macrophage colony-stimu 99.8 1.6E-18 5.4E-23 190.9 15.6 227 405-645 50-286 (292)
92 3vh8_G Killer cell immunoglobu 99.8 5.9E-18 2E-22 188.8 20.3 229 404-642 72-315 (316)
93 1iga_A IGA1; immunoglobulin; N 99.8 2E-17 7E-22 195.7 26.0 339 305-656 79-469 (475)
94 1tdq_A Tenascin-R; extracellul 99.8 9.5E-17 3.2E-21 175.8 28.5 263 341-774 11-277 (283)
95 3l5i_A Interleukin-6 receptor 99.8 4E-17 1.4E-21 179.5 24.8 128 603-779 156-286 (290)
96 1igt_B IGG2A intact antibody - 99.8 2.2E-18 7.4E-23 202.3 15.2 310 305-629 78-434 (444)
97 2dtg_E Insulin receptor; IR ec 99.8 2.9E-19 1E-23 226.1 7.6 346 359-781 479-886 (897)
98 2v44_A NCAM2, neural cell adhe 99.8 3.7E-17 1.3E-21 167.0 21.3 177 455-638 5-185 (189)
99 3rjd_A High affinity immunoglo 99.8 2.5E-17 8.6E-22 178.0 20.8 195 404-630 46-249 (262)
100 3r8q_A Fibronectin; heparin, F 99.8 1.2E-17 4.1E-22 183.7 17.8 247 640-986 19-272 (290)
101 3mjg_X Beta-type platelet-deri 99.8 5.5E-17 1.9E-21 178.3 23.2 223 406-645 51-283 (289)
102 2r15_A Myomesin-1; sarcomeric 99.7 5E-17 1.7E-21 169.4 21.7 173 465-639 15-209 (212)
103 1rhf_A Tyrosine-protein kinase 99.7 3.6E-17 1.2E-21 165.9 20.0 175 452-638 2-181 (182)
104 4fa8_A Secreted protein BARF1; 99.7 3.9E-18 1.3E-22 175.6 12.4 169 461-632 2-194 (203)
105 3l5i_A Interleukin-6 receptor 99.7 1.5E-18 5.1E-23 191.0 9.9 251 685-986 2-270 (290)
106 2nzi_A Titin; IG-domain, FNIII 99.7 1.5E-17 5.1E-22 184.4 18.1 219 406-634 62-284 (305)
107 3ojm_B Fibroblast growth facto 99.7 2.9E-17 1E-21 173.7 19.4 197 451-647 14-228 (231)
108 1epf_A NCAM, protein (neural c 99.7 6.1E-17 2.1E-21 165.6 20.6 181 452-638 2-189 (191)
109 2q7n_A Leukemia inhibitory fac 99.7 1.1E-15 3.7E-20 177.1 33.4 437 350-905 6-486 (488)
110 3rjd_A High affinity immunoglo 99.7 1.4E-16 4.8E-21 172.1 24.2 243 452-770 1-248 (262)
111 1ry7_B FGFR-3, fibroblast grow 99.7 2.3E-18 8E-23 193.7 10.4 266 458-770 14-316 (334)
112 3grw_A Fibroblast growth facto 99.7 3.6E-17 1.2E-21 174.4 18.9 197 451-647 10-225 (241)
113 1tdq_A Tenascin-R; extracellul 99.7 1.8E-17 6.2E-22 181.5 16.9 249 634-986 7-265 (283)
114 1cfb_A Drosophila neuroglian; 99.7 3.9E-17 1.3E-21 169.3 18.4 190 638-907 2-205 (205)
115 3o4o_C Interleukin-1 receptor 99.7 1E-18 3.5E-23 197.1 6.6 222 405-638 80-333 (339)
116 2v5t_A NCAM2, N-CAM 2, neural 99.7 3.7E-17 1.3E-21 166.9 17.5 182 452-639 2-187 (189)
117 3se4_A Interferon alpha/beta r 99.7 7E-17 2.4E-21 186.9 20.5 294 603-986 64-384 (414)
118 2y23_A Myomesin; structural pr 99.7 2.5E-16 8.5E-21 175.0 23.9 255 461-770 10-301 (312)
119 1n26_A IL-6 receptor alpha cha 99.7 4.2E-16 1.4E-20 174.1 25.4 259 559-903 17-295 (325)
120 3se4_A Interferon alpha/beta r 99.7 5.9E-17 2E-21 187.5 18.4 209 603-891 162-388 (414)
121 2oz4_A Intercellular adhesion 99.7 5.7E-17 2E-21 175.6 16.9 200 406-640 56-264 (265)
122 3sgj_C Human FCG3A receptor; r 99.7 7.6E-17 2.6E-21 166.7 16.5 172 451-646 6-180 (204)
123 1f97_A Junction adhesion molec 99.7 1.1E-16 3.7E-21 166.7 17.7 181 453-640 2-207 (212)
124 1hzh_H IGG, immunoglobulin hea 99.7 6.3E-17 2.2E-21 190.5 17.6 213 406-629 194-443 (457)
125 1igt_B IGG2A intact antibody - 99.7 7.9E-17 2.7E-21 188.9 18.1 254 405-664 78-370 (444)
126 2vr9_A Roundabout 1, ROBO; imm 99.7 1.7E-16 5.7E-21 166.1 18.4 186 450-641 7-207 (217)
127 2v9r_A Roundabout homolog 1; p 99.7 1.5E-16 5E-21 165.8 16.3 190 450-645 7-207 (212)
128 3o4o_C Interleukin-1 receptor 99.7 3.8E-17 1.3E-21 184.2 12.5 187 451-642 17-222 (339)
129 3vh8_G Killer cell immunoglobu 99.7 3.9E-16 1.3E-20 173.9 20.4 275 446-783 18-310 (316)
130 2dtg_E Insulin receptor; IR ec 99.7 2.1E-17 7.1E-22 209.2 11.1 287 698-993 479-875 (897)
131 4dep_C Interleukin-1 receptor 99.7 2.6E-16 8.7E-21 178.2 18.7 267 459-770 14-322 (349)
132 2vkw_A Neural cell adhesion mo 99.7 3.7E-16 1.3E-20 162.5 18.1 87 346-434 7-96 (209)
133 1hzh_H IGG, immunoglobulin hea 99.7 2.9E-16 1E-20 184.8 18.4 228 405-636 78-346 (457)
134 2o26_X MAST/stem cell growth f 99.7 8.8E-16 3E-20 168.7 20.9 259 450-770 10-277 (290)
135 3k0w_A Mucosa-associated lymph 99.7 5.6E-16 1.9E-20 162.3 18.3 171 450-641 16-203 (218)
136 3oq3_B IFN-alpha/beta binding 99.7 8.2E-16 2.8E-20 172.3 20.9 259 459-770 36-319 (329)
137 3lpw_A A77-A78 domain from tit 99.7 1.4E-15 4.9E-20 156.3 21.0 86 343-433 4-89 (197)
138 1iga_A IGA1; immunoglobulin; N 99.7 1.1E-14 3.8E-19 172.2 30.6 254 405-665 79-375 (475)
139 1igy_B IGG1 intact antibody MA 99.7 7.8E-18 2.7E-22 196.9 3.3 309 305-629 77-424 (434)
140 3ejj_X Macrophage colony-stimu 99.7 1.8E-15 6E-20 166.1 21.9 257 451-770 3-270 (289)
141 3bp6_B Programmed cell death 1 99.7 4.7E-16 1.6E-20 160.7 16.1 178 458-641 8-194 (202)
142 3mtr_A N-CAM-1, NCAM-1, neural 99.7 6.8E-16 2.3E-20 161.3 17.2 187 451-643 18-212 (215)
143 2x1w_L Vascular endothelial gr 99.7 9.3E-16 3.2E-20 159.9 18.0 179 458-642 13-209 (213)
144 2ifg_A High affinity nerve gro 99.7 1.5E-16 5.3E-21 179.6 12.8 183 450-642 156-347 (347)
145 3f7q_A Integrin beta-4, GP150; 99.7 6.7E-16 2.3E-20 163.6 16.4 184 718-943 32-227 (234)
146 1fnl_A Low affinity immunoglob 99.7 1.1E-15 3.7E-20 153.9 17.0 167 450-640 5-174 (175)
147 1cfb_A Drosophila neuroglian; 99.7 3.6E-15 1.2E-19 154.4 21.2 87 341-434 2-90 (205)
148 2c1o_A IGK-C protein; FAB frag 99.7 3.2E-16 1.1E-20 168.6 13.7 203 413-630 11-245 (254)
149 3p2t_A Leukocyte immunoglobuli 99.7 7.3E-16 2.5E-20 158.4 15.8 170 451-628 4-179 (196)
150 3jz7_A MCAR, CAR, coxsackievir 99.7 3.3E-16 1.1E-20 163.2 13.2 177 458-641 6-213 (214)
151 3b5h_A Cervical EMMPRIN, HAB18 99.7 6.1E-15 2.1E-19 149.7 22.1 165 462-639 8-182 (184)
152 4fqp_A Poliovirus receptor; im 99.7 1.7E-15 5.8E-20 168.5 19.5 257 456-770 4-293 (313)
153 3fl7_A Ephrin receptor; ATP-bi 99.7 1.2E-15 4.1E-20 177.8 18.7 116 312-432 301-426 (536)
154 3e0g_A Leukemia inhibitory fac 99.7 2.4E-14 8.1E-19 164.4 29.2 395 306-783 45-478 (483)
155 2wng_A Tyrosine-protein phosph 99.6 8.4E-15 2.9E-19 164.0 23.4 271 454-770 5-308 (327)
156 1nbq_A JAM, junctional adhesio 99.6 2.8E-16 9.7E-21 163.1 10.1 172 452-630 4-197 (209)
157 3s97_C Contactin-1; carbonic a 99.6 5.3E-16 1.8E-20 159.9 12.0 175 456-639 12-200 (201)
158 3p4l_A Neogenin; iron homeosta 99.6 1.4E-15 4.8E-20 158.3 15.2 190 641-905 4-204 (211)
159 2d3v_A Leukocyte immunoglobuli 99.6 7.6E-16 2.6E-20 158.3 12.8 170 451-628 4-180 (196)
160 2ibg_A CG9211-PA, GH03927P; IH 99.6 4.5E-15 1.6E-19 154.8 18.9 159 717-905 30-212 (214)
161 1vca_A VCAM-D1,2, human vascul 99.6 5.8E-15 2E-19 152.2 19.4 178 459-643 7-200 (202)
162 4dkd_C Macrophage colony-stimu 99.6 1.7E-15 5.7E-20 166.6 15.7 259 451-770 3-270 (292)
163 2vkw_A Neural cell adhesion mo 99.6 2.5E-15 8.4E-20 156.2 15.9 159 705-895 25-190 (209)
164 1f2q_A High affinity immunoglo 99.6 1.5E-15 5.2E-20 153.0 13.9 169 451-643 3-174 (176)
165 1igy_B IGG1 intact antibody MA 99.6 4.6E-17 1.6E-21 190.3 2.5 251 405-664 77-360 (434)
166 1zvo_C Myeloma immunoglobulin 99.6 3.4E-14 1.1E-18 169.2 27.0 314 305-632 79-495 (512)
167 1ugn_A LIR1, leukocyte immunog 99.6 1.8E-15 6E-20 155.8 13.8 172 450-629 3-182 (198)
168 1uct_A Immunoglobulin alpha FC 99.6 3E-15 1E-19 156.3 15.8 181 450-641 7-199 (218)
169 3r4d_A CEA-related cell adhesi 99.6 3.3E-15 1.1E-19 155.0 15.9 174 459-643 6-203 (208)
170 2ibg_A CG9211-PA, GH03927P; IH 99.6 5.5E-15 1.9E-19 154.2 17.5 78 704-781 132-210 (214)
171 2oz4_A Intercellular adhesion 99.6 2.6E-14 8.8E-19 154.6 23.4 191 450-664 4-209 (265)
172 3u83_A Poliovirus receptor-rel 99.6 3.4E-15 1.1E-19 167.5 16.8 257 452-770 14-309 (331)
173 1itb_B Type 1 interleukin-1 re 99.6 4.9E-16 1.7E-20 173.0 9.6 262 461-770 14-303 (315)
174 3lb6_C IL-13, interleukin-13 r 99.6 3.5E-15 1.2E-19 169.4 16.4 280 614-986 7-308 (380)
175 2ny1_B T-cell surface glycopro 99.6 1.6E-15 5.3E-20 154.1 11.8 164 461-645 4-184 (184)
176 2gi7_A GPVI protein; IG-like d 99.6 3.6E-15 1.2E-19 151.4 14.1 160 449-629 5-169 (184)
177 3d85_D IL-12B, interleukin-12 99.6 1.2E-14 4.1E-19 159.3 19.3 248 462-779 16-303 (306)
178 1za6_B IGG heavy chain; immuno 99.6 2.4E-15 8.1E-20 169.7 14.0 216 405-629 78-330 (344)
179 4f80_A Butyrophilin subfamily 99.6 2.2E-14 7.6E-19 151.0 19.4 177 460-641 12-214 (226)
180 3fl7_A Ephrin receptor; ATP-bi 99.6 1.6E-15 5.4E-20 176.8 11.5 224 612-904 303-532 (536)
181 3lpw_A A77-A78 domain from tit 99.6 1.3E-14 4.4E-19 149.0 17.0 175 640-895 4-183 (197)
182 1hng_A CD2; T lymphocyte adhes 99.6 2.9E-15 9.8E-20 150.7 11.7 156 461-638 5-174 (176)
183 1oll_A NK receptor; immune sys 99.6 1.9E-14 6.5E-19 146.6 17.9 165 451-627 3-172 (188)
184 2fbo_J V1V2;, variable region- 99.6 3.4E-15 1.2E-19 159.9 12.8 172 458-630 8-239 (250)
185 3ry4_A Low affinity immunoglob 99.6 1.7E-14 5.9E-19 144.2 16.6 164 451-638 3-169 (170)
186 3sbw_C Programmed cell death 1 99.6 2.8E-14 9.7E-19 149.6 18.8 180 459-642 8-213 (222)
187 1bqu_A Protein (GP130); cytoki 99.6 1.1E-14 3.8E-19 152.0 15.4 182 563-792 9-212 (215)
188 3uto_A Twitchin; kinase, muscl 99.6 1.5E-14 5.2E-19 172.6 18.4 98 340-443 5-102 (573)
189 3mj8_L Stimulatory hamster ant 99.6 1.2E-14 4.1E-19 151.5 15.4 173 455-631 4-204 (213)
190 1zvo_C Myeloma immunoglobulin 99.6 1.1E-12 3.6E-17 156.2 33.4 226 405-631 79-388 (512)
191 4fom_A Poliovirus receptor-rel 99.6 2.6E-15 8.9E-20 166.5 10.1 226 305-548 73-304 (308)
192 3d9a_L Light chain of hyhel10 99.6 1.3E-14 4.3E-19 151.3 14.2 174 455-631 4-204 (213)
193 2wqr_A IG epsilon chain C regi 99.6 4.6E-15 1.6E-19 165.7 11.4 212 407-629 73-309 (323)
194 3mjg_X Beta-type platelet-deri 99.6 1E-13 3.6E-18 151.9 21.0 255 455-771 3-268 (289)
195 3f7q_A Integrin beta-4, GP150; 99.6 4.9E-14 1.7E-18 149.1 17.2 145 601-794 55-208 (234)
196 1p6f_A NKP46, natural cytotoxi 99.6 8.2E-14 2.8E-18 147.7 18.8 184 450-645 5-196 (242)
197 3nl4_L Antigen binding fragmen 99.6 4.3E-14 1.5E-18 147.2 16.2 169 453-624 2-198 (213)
198 4frw_A Poliovirus receptor-rel 99.6 2.9E-14 1E-18 148.6 14.9 179 458-638 5-209 (218)
199 1f3r_B FV antibody fragment; I 99.5 6.8E-14 2.3E-18 150.5 17.6 184 459-642 7-247 (257)
200 2ghw_B Anti-SARS SCFV antibody 99.5 1.2E-13 4E-18 147.7 18.9 186 459-645 9-246 (247)
201 3s96_B 3B5H10 FAB light chain; 99.5 5.5E-14 1.9E-18 147.0 15.9 174 454-631 3-211 (218)
202 3lb6_C IL-13, interleukin-13 r 99.5 1E-13 3.4E-18 157.4 19.3 307 319-783 10-332 (380)
203 1lk3_L 9D7 light chain; antige 99.5 4.1E-14 1.4E-18 147.0 14.8 170 459-631 7-203 (210)
204 1jbj_A CD3 epsilon and gamma e 99.5 1.9E-14 6.6E-19 146.2 11.7 146 464-630 11-179 (186)
205 3s98_A Interferon alpha/beta r 99.5 2.9E-14 1E-18 157.0 13.8 174 717-920 31-214 (306)
206 3auv_A SC-DSFV derived from th 99.5 2.1E-13 7.3E-18 148.3 20.1 191 452-644 12-258 (276)
207 1bqu_A Protein (GP130); cytoki 99.5 1.3E-14 4.3E-19 151.6 9.7 194 640-912 6-212 (215)
208 1nqb_A Single-chain antibody f 99.5 2.4E-13 8.2E-18 146.0 19.2 179 458-639 6-232 (256)
209 2pet_A Lutheran blood group gl 99.5 2.7E-14 9.2E-19 150.8 11.6 168 458-626 6-211 (231)
210 2a38_A Titin; Z1Z2, structural 99.5 3.7E-13 1.3E-17 137.6 19.4 132 406-543 63-194 (194)
211 1nkr_A P58-CL42 KIR; inhibitor 99.5 1.6E-13 5.5E-18 141.4 16.5 169 450-627 6-184 (201)
212 3tv3_L PGT128 light chain, IG 99.5 7.7E-14 2.6E-18 145.0 13.5 170 456-631 5-202 (211)
213 3bpo_C Interleukin-13 receptor 99.5 3.6E-12 1.2E-16 141.3 27.5 122 614-783 169-309 (314)
214 3r06_A Anti-mouse CD3epsilon a 99.5 1.4E-13 4.8E-18 143.3 15.1 176 453-631 2-204 (213)
215 3uzq_A Anti-dengue MAB 4E11; d 99.5 2E-13 6.9E-18 146.4 16.7 187 456-645 5-249 (253)
216 4i0k_A CD276 antigen; immunogl 99.5 4.4E-14 1.5E-18 148.2 10.8 178 461-643 4-209 (222)
217 2if7_A SLAM family member 6; N 99.5 2.2E-13 7.5E-18 139.3 15.7 160 458-633 4-185 (193)
218 3juy_B 3B3 single chain varian 99.5 5.1E-13 1.7E-17 143.5 19.1 178 451-628 5-244 (256)
219 3mj6_A Junctional adhesion mol 99.5 9.1E-14 3.1E-18 150.5 13.4 183 453-641 6-238 (268)
220 1dr9_A B7-1 (CD80), T lymphocy 99.5 4E-13 1.4E-17 138.4 17.3 169 461-634 3-195 (201)
221 3sob_L Antibody light chain; b 99.5 3.3E-13 1.1E-17 143.0 17.2 179 452-633 24-229 (237)
222 3p4l_A Neogenin; iron homeosta 99.5 4.9E-13 1.7E-17 139.0 17.9 132 602-781 62-202 (211)
223 3gkz_A Anti-methamphetamine si 99.5 7.6E-13 2.6E-17 142.2 20.0 188 455-645 11-254 (257)
224 2gee_A Hypothetical protein; f 99.5 1.4E-13 4.9E-18 141.9 13.4 140 718-895 50-193 (203)
225 2p1y_A Bispecific alpha/beta T 99.5 3.7E-13 1.3E-17 142.8 16.9 172 455-627 3-222 (238)
226 3esu_F Antibody 14B7* light ch 99.5 4.9E-13 1.7E-17 143.1 17.8 172 454-625 6-231 (250)
227 2wv3_A Neuroplastin; igcam, me 99.5 1.6E-12 5.4E-17 132.5 20.7 130 404-543 54-189 (190)
228 2yd6_A PTPRD protein; hydrolas 99.5 9.1E-13 3.1E-17 137.0 19.0 139 405-548 62-208 (212)
229 2znx_A SCFV; fluorotryptohpan, 99.5 6.8E-13 2.3E-17 141.1 18.4 172 455-626 4-222 (242)
230 2gys_A Cytokine receptor commo 99.5 3.5E-13 1.2E-17 156.0 17.4 293 609-986 77-394 (419)
231 3pv7_A B7-H6, IG-like domain-c 99.5 4.3E-13 1.5E-17 143.4 16.7 177 458-638 9-224 (248)
232 3knb_B Obscurin-like protein 1 99.5 1.8E-13 6.2E-18 124.2 11.7 97 450-546 11-107 (107)
233 1qok_A MFE-23 recombinant anti 99.5 1.1E-12 3.8E-17 143.0 20.3 184 456-640 30-268 (282)
234 1za6_B IGG heavy chain; immuno 99.5 4.4E-13 1.5E-17 151.0 17.2 167 458-633 6-210 (344)
235 2gys_A Cytokine receptor commo 99.5 1.3E-12 4.5E-17 151.1 21.6 102 339-446 103-214 (419)
236 1q0x_L FAB 9B1, light chain; a 99.5 3.3E-13 1.1E-17 140.3 14.9 168 459-629 7-204 (212)
237 1sy6_A T-cell surface glycopro 99.5 1.2E-13 4E-18 142.6 11.0 153 464-638 15-202 (204)
238 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 8.4E-13 2.9E-17 141.8 17.6 172 454-629 5-235 (256)
239 1moe_A Anti-CEA MAB T84.66; an 99.5 7.6E-13 2.6E-17 140.6 17.0 172 455-626 4-220 (240)
240 1qr4_A Protein (tenascin); fib 99.5 7.3E-13 2.5E-17 134.5 15.9 175 638-904 3-183 (186)
241 3umt_A SCFV heavy chain and li 99.5 1E-12 3.4E-17 141.2 17.7 180 459-641 9-246 (256)
242 1nfd_E H57 FAB; complex (immun 99.5 5.7E-14 1.9E-18 146.2 7.5 168 459-629 6-201 (212)
243 1svz_A Immunoglobulin;, single 99.5 1.8E-12 6.2E-17 138.4 19.2 170 455-626 4-228 (247)
244 2xzc_L FAB A.17 light chain; i 99.4 3.7E-13 1.3E-17 140.5 13.4 170 459-631 7-206 (216)
245 1c1e_H Catalytic antibody 1E9 99.4 5.9E-13 2E-17 139.2 14.9 173 458-634 6-214 (219)
246 2zg1_A Sialic acid-binding IG- 99.4 6.8E-13 2.3E-17 138.1 15.2 168 457-636 5-209 (214)
247 1hnf_A CD2; T lymphocyte adhes 99.4 5.1E-13 1.7E-17 134.4 13.6 158 459-638 6-179 (182)
248 1b6u_A KIR2DL3, P58 killer cel 99.4 5.6E-13 1.9E-17 142.3 14.4 185 450-643 5-204 (257)
249 2r15_A Myomesin-1; sarcomeric 99.4 1.7E-12 5.9E-17 134.8 17.8 135 406-545 59-211 (212)
250 4fa8_A Secreted protein BARF1; 99.4 2.4E-13 8.1E-18 139.7 10.8 123 405-536 68-194 (203)
251 3qib_D 2B4 beta chain; IG doma 99.4 9.8E-13 3.4E-17 142.5 16.3 200 414-631 4-246 (270)
252 3e0g_A Leukemia inhibitory fac 99.4 3.4E-11 1.2E-15 138.3 29.7 260 556-906 206-482 (483)
253 2ha1_A Fibronectin; beta sandw 99.4 1.1E-12 3.9E-17 134.9 15.8 158 701-895 15-190 (201)
254 1qr4_A Protein (tenascin); fib 99.4 4.3E-12 1.5E-16 128.8 19.5 122 600-773 54-175 (186)
255 2crz_A Fibronectin type-III do 99.4 5.4E-13 1.8E-17 122.2 11.2 104 684-792 6-109 (110)
256 4dzb_B Vbeta2 (MAIT T cell rec 99.4 1.1E-12 3.6E-17 140.1 15.3 175 455-631 4-222 (246)
257 3bkj_L WO2 IGG2A FAB fragment 99.4 6.2E-13 2.1E-17 142.5 13.4 176 452-630 34-241 (252)
258 2j8h_A Titin, connectin; cardi 99.4 9.7E-13 3.3E-17 134.9 14.3 133 406-543 62-196 (197)
259 3rbs_A Myomesin-1; immunoglobu 99.4 1E-12 3.5E-17 135.8 14.5 128 406-543 61-206 (207)
260 4fmk_A Poliovirus receptor-rel 99.4 7.6E-13 2.6E-17 138.5 13.8 176 459-637 8-214 (225)
261 3s98_A Interferon alpha/beta r 99.4 2.7E-12 9.2E-17 141.2 18.3 134 603-780 158-299 (306)
262 3ux9_B SCFV antibody; five hel 99.4 1.9E-12 6.5E-17 139.0 16.7 169 459-627 9-236 (256)
263 2wqr_A IG epsilon chain C regi 99.4 3.4E-13 1.2E-17 150.5 11.0 208 451-664 6-243 (323)
264 1ccz_A Protein (CD58); LFA-3, 99.4 5.4E-13 1.8E-17 133.1 11.3 152 461-636 4-167 (171)
265 1mju_H Immunoglobulin MS6-12; 99.4 1.8E-12 6.2E-17 136.3 15.8 185 458-646 6-223 (227)
266 3eow_R Poliovirus receptor; im 99.4 2.1E-13 7.1E-18 142.9 8.5 181 459-645 6-215 (221)
267 2gjj_A A21 single-chain antibo 99.4 2.3E-12 8E-17 138.9 16.8 174 451-626 4-239 (264)
268 3knb_A Titin; IG-like, titin, 99.4 1.4E-12 4.9E-17 116.7 12.5 96 449-544 2-99 (100)
269 1cd9_B G-CSF-R, protein (G-CSF 99.4 3.3E-12 1.1E-16 133.0 17.1 140 603-783 67-210 (215)
270 2gee_A Hypothetical protein; f 99.4 8.2E-12 2.8E-16 128.6 19.8 125 599-774 72-197 (203)
271 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 1.2E-12 4.1E-17 137.2 13.6 172 459-634 7-217 (222)
272 1x5y_A Myosin binding protein 99.4 2.4E-12 8.3E-17 118.1 13.8 79 705-783 26-104 (111)
273 3d9a_H Heavy chain of hyhel10 99.4 1.6E-12 5.4E-17 134.9 13.7 169 459-632 7-206 (210)
274 2yd1_A Tyrosine-protein phosph 99.4 3.7E-12 1.3E-16 132.3 16.6 133 406-546 64-202 (212)
275 3fku_X Neutralizing antibody F 99.4 3.1E-12 1.1E-16 139.2 16.4 182 459-644 7-254 (280)
276 2yuw_A Myosin binding protein 99.4 2.9E-12 9.8E-17 117.4 13.6 80 704-783 24-103 (110)
277 1bpv_A Titin, A71, connectin; 99.4 1.4E-13 4.8E-18 125.8 4.4 86 698-783 21-107 (112)
278 2iep_A Muscle-specific kinase 99.4 1.9E-12 6.5E-17 132.1 13.3 130 406-546 62-192 (192)
279 3omz_A Human vdelta1 gamma del 99.4 1.9E-12 6.6E-17 139.3 13.5 171 453-626 3-231 (259)
280 2c5d_C AXL oncogene, tyrosine- 99.4 9.6E-12 3.3E-16 127.2 18.1 122 406-542 68-191 (195)
281 2v5t_A NCAM2, N-CAM 2, neural 99.4 5.2E-12 1.8E-16 128.3 15.6 130 405-543 56-187 (189)
282 3lcy_A Titin; A-BAND, IG tande 99.4 8.3E-12 2.8E-16 127.7 16.5 130 406-544 63-196 (197)
283 1pz5_B Heavy chain of FAB (SYA 99.4 7.3E-12 2.5E-16 131.0 16.4 171 459-633 7-214 (220)
284 2j6e_L IGM, FAB light chain; a 99.4 6.4E-13 2.2E-17 140.6 8.3 169 459-630 26-225 (234)
285 1hxm_B Gamma-delta T-cell rece 99.4 1.3E-11 4.6E-16 131.0 18.6 180 455-638 4-227 (242)
286 1wf5_A Sidekick 2 protein; FNI 99.4 1.4E-12 4.8E-17 121.9 9.6 108 627-782 3-113 (121)
287 1x9q_A SCFV, 4M5.3 anti-fluore 99.4 1.3E-11 4.4E-16 133.5 18.5 176 451-626 14-254 (268)
288 1dee_B IGM RF 2A2; FAB-IBP com 99.4 3E-11 1E-15 126.6 20.5 171 459-632 7-219 (223)
289 3r4d_A CEA-related cell adhesi 99.4 2.8E-12 9.6E-17 132.7 12.4 135 404-548 69-204 (208)
290 3bpo_C Interleukin-13 receptor 99.4 2.2E-12 7.6E-17 143.1 12.2 256 642-986 4-284 (314)
291 4go6_B HCF C-terminal chain 1; 99.3 2.7E-12 9.3E-17 135.0 12.0 141 601-775 43-193 (232)
292 2fbj_H IGA-kappa J539 FAB (hea 99.3 1.7E-11 5.8E-16 128.1 17.8 169 459-631 7-212 (220)
293 2yux_A Myosin-binding protein 99.3 1.2E-12 4.1E-17 122.0 8.1 108 627-781 3-110 (120)
294 1uey_A KIAA0343 protein; immun 99.3 2.5E-12 8.4E-17 121.3 10.3 116 632-796 7-124 (127)
295 2dru_A Chimera of CD48 antigen 99.3 4.2E-12 1.4E-16 127.9 12.5 154 460-635 7-176 (180)
296 1gsm_A Madcam-1, mucosal addre 99.3 2.7E-11 9.3E-16 123.1 18.5 159 462-631 17-196 (210)
297 2e3v_A Neural cell adhesion mo 99.3 3.9E-12 1.3E-16 118.8 11.2 91 704-796 23-116 (122)
298 3bqu_C 3H6 FAB light chain; be 99.3 3.1E-13 1.1E-17 142.9 4.2 175 452-629 23-224 (233)
299 3grw_A Fibroblast growth facto 99.3 1.1E-11 3.6E-16 131.7 16.0 140 405-549 71-223 (241)
300 1rhf_A Tyrosine-protein kinase 99.3 2.1E-11 7.2E-16 123.1 17.4 120 406-542 60-181 (182)
301 2crm_A Fibronectin type-III do 99.3 3.7E-12 1.3E-16 118.7 10.9 83 698-782 29-112 (120)
302 4ei6_B Vbeta16 XV19 type II na 99.3 1.4E-11 4.9E-16 131.1 16.8 176 453-631 3-221 (245)
303 2db8_A Tripartite motif protei 99.3 3.6E-12 1.2E-16 116.4 10.4 93 684-779 7-99 (110)
304 2rgs_A I, IG gamma-2B heavy ch 99.3 2.9E-12 9.8E-17 133.8 10.8 177 451-630 8-206 (218)
305 1epf_A NCAM, protein (neural c 99.3 6.7E-12 2.3E-16 127.9 13.3 128 404-542 60-189 (191)
306 2v44_A NCAM2, neural cell adhe 99.3 1.6E-11 5.6E-16 124.7 16.2 126 406-542 58-185 (189)
307 2gki_A Nuclease; anti-DNA anti 99.3 1.1E-11 3.8E-16 135.7 15.9 167 458-627 28-258 (291)
308 2ic2_A CG9211-PA, GH03927P; IH 99.3 1.8E-12 6.1E-17 119.1 8.0 94 685-783 4-109 (115)
309 2v9r_A Roundabout homolog 1; p 99.3 6.2E-12 2.1E-16 130.5 13.2 136 407-552 73-210 (212)
310 1op3_H FAB 2G12, heavy chain; 99.3 1E-11 3.4E-16 130.4 14.7 166 459-629 7-214 (225)
311 2d3v_A Leukocyte immunoglobuli 99.3 2.6E-11 8.7E-16 124.2 17.3 124 404-533 56-181 (196)
312 1wis_A KIAA1514 protein; FNIII 99.3 2.5E-12 8.6E-17 120.5 8.9 96 640-782 16-116 (124)
313 3bae_H WO2 IGG2A FAB fragment 99.3 1.3E-11 4.4E-16 129.8 15.4 170 459-632 7-218 (228)
314 1v5j_A KIAA1355 protein, RSGI 99.3 1.7E-12 5.7E-17 116.8 7.2 95 684-782 5-100 (108)
315 3jz7_A MCAR, CAR, coxsackievir 99.3 4E-12 1.4E-16 132.0 11.2 130 404-546 82-214 (214)
316 1x4z_A Biregional cell adhesio 99.3 1.6E-11 5.5E-16 114.5 14.1 97 640-783 16-114 (121)
317 2vol_A Murine IGG FC; FC, zinc 99.3 4.8E-12 1.7E-16 130.9 11.6 170 457-629 7-197 (207)
318 2haz_A N-CAM 1, neural cell ad 99.3 2.8E-12 9.7E-17 116.2 8.4 95 685-781 5-102 (105)
319 3b5h_A Cervical EMMPRIN, HAB18 99.3 5.7E-11 1.9E-15 120.1 19.0 124 406-543 51-182 (184)
320 3k0w_A Mucosa-associated lymph 99.3 1.7E-11 5.8E-16 127.9 15.5 132 404-548 63-206 (218)
321 2va4_A NCAM2, N-CAM 2, neural 99.3 3.3E-11 1.1E-15 122.7 17.3 129 405-543 57-192 (192)
322 3p2t_A Leukocyte immunoglobuli 99.3 4.2E-11 1.4E-15 122.6 18.1 123 404-532 56-179 (196)
323 3nfj_J T cell receptor beta ch 99.3 1.9E-11 6.5E-16 130.2 16.1 175 455-631 4-221 (245)
324 2kbg_A N-CAM 2, neural cell ad 99.3 6.5E-12 2.2E-16 114.0 10.4 87 686-775 8-94 (114)
325 1f97_A Junction adhesion molec 99.3 4.7E-12 1.6E-16 131.3 10.8 180 349-543 16-206 (212)
326 2ha1_A Fibronectin; beta sandw 99.3 2.8E-11 9.6E-16 124.5 16.5 142 596-774 48-194 (201)
327 3pl6_D MBP peptide / T-cell re 99.3 1.6E-11 5.5E-16 132.7 15.3 176 452-630 26-242 (268)
328 3s97_C Contactin-1; carbonic a 99.3 1.5E-11 5.1E-16 126.3 14.2 134 404-543 64-200 (201)
329 3q5y_A TCR N15 beta; IG, T cel 99.3 3.2E-11 1.1E-15 127.9 17.2 174 455-631 5-215 (240)
330 1dn0_B IGM-kappa cold agglutin 99.3 6E-11 2E-15 125.0 18.8 177 459-639 7-226 (232)
331 3nl4_H Antigen binding fragmen 99.3 1.3E-11 4.4E-16 128.5 13.1 174 458-636 5-210 (215)
332 3ojm_B Fibroblast growth facto 99.3 1.9E-11 6.6E-16 128.6 14.6 139 405-548 75-225 (231)
333 1wfu_A Unnamed protein product 99.3 7.5E-12 2.6E-16 115.0 9.9 85 696-782 24-112 (120)
334 2fbo_J V1V2;, variable region- 99.3 2.1E-11 7.1E-16 130.2 15.0 127 405-533 89-238 (250)
335 1x3d_A Fibronectin type-III do 99.3 6.1E-12 2.1E-16 116.9 9.1 93 640-781 16-109 (118)
336 2xqy_G A13-D6.3 monoclonal ant 99.3 3.1E-11 1.1E-15 129.5 15.9 193 458-668 12-240 (261)
337 2ed9_A Netrin receptor DCC; tu 99.3 4.1E-12 1.4E-16 119.3 7.9 115 620-781 3-121 (124)
338 1x5f_A Neogenin; RGM binding, 99.3 9.6E-12 3.3E-16 115.9 10.4 96 640-781 16-111 (120)
339 1x5x_A Fibronectin type-III do 99.3 1.2E-11 4.1E-16 113.0 10.8 79 702-782 22-101 (109)
340 3n06_B PRL-R, prolactin recept 99.3 1.1E-10 3.7E-15 121.0 19.5 132 605-783 63-201 (210)
341 2ed7_A Netrin receptor DCC; tu 99.3 1.8E-11 6.3E-16 113.8 12.2 95 640-781 16-110 (119)
342 3m8o_H Immunoglobulin A1 heavy 99.3 1.1E-10 3.8E-15 122.0 19.6 162 459-630 7-213 (221)
343 2dju_A Receptor-type tyrosine- 99.3 2.1E-11 7.2E-16 110.7 12.1 101 639-792 5-106 (106)
344 4f80_A Butyrophilin subfamily 99.3 1.9E-11 6.6E-16 128.3 13.5 130 405-545 82-214 (226)
345 1b6u_A KIR2DL3, P58 killer cel 99.3 6E-11 2.1E-15 126.5 17.4 174 404-585 60-239 (257)
346 3liz_H 4C3 monoclonal antibody 99.3 3.7E-11 1.3E-15 128.6 15.8 177 459-644 7-224 (253)
347 3n06_B PRL-R, prolactin recept 99.3 5.6E-11 1.9E-15 123.1 16.4 156 719-906 33-205 (210)
348 2cqv_A MLCK, myosin light chai 99.3 3E-11 1E-15 111.3 12.7 101 450-550 5-105 (114)
349 1x4x_A Fibronectin type-III do 99.3 1.8E-11 6.2E-16 111.0 10.9 77 700-780 20-96 (106)
350 1wfo_A Sidekick 2; FN3, cell a 99.3 3.6E-12 1.2E-16 120.8 5.9 109 621-777 3-117 (130)
351 2e7h_A Ephrin type-B receptor 99.3 2.4E-11 8.3E-16 110.9 11.3 92 640-781 6-100 (109)
352 3knb_B Obscurin-like protein 1 99.3 2.2E-11 7.7E-16 110.3 10.9 86 557-642 22-107 (107)
353 1uem_A KIAA1568 protein; immun 99.3 8.9E-12 3.1E-16 115.5 8.4 98 638-783 12-110 (117)
354 4go6_B HCF C-terminal chain 1; 99.3 9.8E-13 3.3E-17 138.4 1.9 154 714-895 17-188 (232)
355 1ugn_A LIR1, leukocyte immunog 99.2 7.9E-11 2.7E-15 120.7 15.9 124 404-533 56-182 (198)
356 3qp3_A Titin; I-SET IG-like, s 99.2 6E-11 2.1E-15 107.0 13.1 95 451-545 7-101 (103)
357 1x5g_A Neogenin; RGM binding, 99.2 6.5E-11 2.2E-15 109.5 13.4 93 641-783 17-109 (116)
358 2x1w_L Vascular endothelial gr 99.2 2.7E-11 9.1E-16 125.9 11.9 138 405-548 63-211 (213)
359 2dm4_A Sortilin-related recept 99.2 2.1E-11 7.3E-16 111.1 9.8 94 684-781 5-99 (108)
360 3bn9_D E2 FAB heavy chain; ant 99.2 5.6E-11 1.9E-15 127.0 14.6 167 459-629 7-219 (257)
361 1hng_A CD2; T lymphocyte adhes 99.2 4.2E-11 1.5E-15 120.0 12.7 116 404-542 59-174 (176)
362 1oll_A NK receptor; immune sys 99.2 1.2E-10 4.1E-15 118.3 16.2 118 404-531 55-172 (188)
363 2djs_A Ephrin type-B receptor 99.2 3.1E-11 1.1E-15 110.0 10.7 64 717-781 36-99 (108)
364 2edx_A Protein tyrosine phosph 99.2 4E-11 1.4E-15 114.2 11.9 98 697-796 28-128 (134)
365 2ed8_A Netrin receptor DCC; tu 99.2 3.1E-11 1.1E-15 109.5 10.4 77 702-782 22-98 (106)
366 1uct_A Immunoglobulin alpha FC 99.2 8.4E-11 2.9E-15 122.4 15.1 116 407-531 65-180 (218)
367 2vr9_A Roundabout 1, ROBO; imm 99.2 2.2E-11 7.4E-16 126.9 10.7 124 409-542 72-204 (217)
368 2wbj_D OB TCR; transmembrane, 99.2 2.6E-10 9E-15 123.9 19.4 180 452-631 24-247 (279)
369 2gi7_A GPVI protein; IG-like d 99.2 8.4E-11 2.9E-15 118.9 14.2 149 361-533 21-169 (184)
370 2e7c_A Myosin-binding protein 99.2 6.9E-11 2.4E-15 109.7 12.4 113 430-546 2-117 (118)
371 1cd9_B G-CSF-R, protein (G-CSF 99.2 1.6E-10 5.4E-15 120.2 16.6 130 743-906 66-214 (215)
372 3n1f_C Cell adhesion molecule- 99.2 2.4E-11 8.1E-16 109.0 8.8 91 687-778 4-98 (102)
373 3sgj_C Human FCG3A receptor; r 99.2 6.8E-11 2.3E-15 121.8 13.5 122 406-547 54-177 (204)
374 1x5z_A Receptor-type tyrosine- 99.2 1.3E-11 4.4E-16 114.1 7.1 71 718-792 45-115 (115)
375 1g1c_A Immunoglobulin-like dom 99.2 1.1E-10 3.8E-15 104.4 13.0 94 451-544 4-98 (99)
376 2kkq_A Myotilin; unknown funct 99.2 1.3E-10 4.4E-15 107.3 13.8 100 450-549 13-114 (116)
377 1f2q_A High affinity immunoglo 99.2 4.9E-11 1.7E-15 119.7 11.7 124 404-547 49-174 (176)
378 1x4y_A Biregional cell adhesio 99.2 3.5E-11 1.2E-15 110.8 9.7 85 696-781 17-105 (114)
379 2ny1_B T-cell surface glycopro 99.2 1.1E-10 3.6E-15 118.1 14.2 116 405-547 67-182 (184)
380 3irg_B Obscurin-like protein 1 99.2 7.5E-11 2.6E-15 107.2 11.8 97 450-546 11-107 (107)
381 2c1o_A IGK-C protein; FAB frag 99.2 3.8E-11 1.3E-15 128.6 11.3 124 406-534 113-245 (254)
382 2ifg_A High affinity nerve gro 99.2 5.5E-11 1.9E-15 133.9 13.1 131 403-546 209-347 (347)
383 2dn7_A Receptor-type tyrosine- 99.2 3.5E-11 1.2E-15 109.4 9.3 88 684-775 5-92 (107)
384 2yrz_A Integrin beta-4; GP150, 99.2 4.5E-11 1.6E-15 110.9 10.2 89 684-775 15-103 (118)
385 1fnl_A Low affinity immunoglob 99.2 2.3E-10 8E-15 114.6 16.1 121 404-544 52-174 (175)
386 2yuz_A Myosin-binding protein 99.2 5.1E-11 1.8E-15 106.5 10.0 93 451-547 6-98 (100)
387 3sbw_C Programmed cell death 1 99.2 9.8E-11 3.4E-15 122.4 13.9 133 406-548 80-215 (222)
388 1bpv_A Titin, A71, connectin; 99.2 1.7E-11 5.8E-16 111.9 6.9 90 343-436 9-99 (112)
389 1i1c_A IGG2A, IG gamma-2A chai 99.2 4.4E-11 1.5E-15 126.4 11.2 163 464-629 29-211 (239)
390 1nqb_A Single-chain antibody f 99.2 1.6E-10 5.5E-15 123.8 15.8 136 405-544 78-233 (256)
391 3puc_A Titin; I-SET IG-like do 99.2 1.6E-10 5.4E-15 103.3 13.2 93 451-543 5-97 (99)
392 3bp6_B Programmed cell death 1 99.2 1.5E-10 5.1E-15 119.1 14.7 130 405-546 66-195 (202)
393 1x5j_A Neogenin; RGM binding, 99.2 9.8E-11 3.4E-15 107.2 11.7 100 640-783 7-106 (113)
394 1c5d_H Monoclonal antibody aga 99.2 1.2E-10 4E-15 121.2 13.9 169 459-632 7-208 (215)
395 1wk0_A KIAA0970 protein; fibro 99.2 7.4E-11 2.5E-15 110.5 10.8 97 697-795 27-132 (137)
396 3mj6_A Junctional adhesion mol 99.2 1.7E-10 5.7E-15 124.6 15.4 191 348-552 19-246 (268)
397 3o3u_N Maltose-binding peripla 99.2 5.7E-11 1.9E-15 144.2 13.0 166 460-630 374-567 (581)
398 2ghw_B Anti-SARS SCFV antibody 99.2 2.3E-10 7.8E-15 121.9 16.1 136 405-543 80-241 (247)
399 2w59_A IGY FCU3-4; immunoglobu 99.2 4.9E-11 1.7E-15 125.6 10.7 176 452-630 12-218 (231)
400 3uzq_A Anti-dengue MAB 4E11; d 99.2 1.4E-10 4.6E-15 124.2 14.3 141 405-549 79-249 (253)
401 1wfn_A Sidekick 2; FN3, cell a 99.2 2.5E-11 8.6E-16 112.9 7.3 76 701-777 31-106 (119)
402 4i0k_A CD276 antigen; immunogl 99.2 4.9E-10 1.7E-14 117.1 18.1 137 405-549 71-211 (222)
403 1l6x_A Immunoglobulin gamma-1 99.2 4.8E-11 1.7E-15 123.3 10.2 160 465-629 16-197 (207)
404 1nbq_A JAM, junctional adhesio 99.2 7.4E-12 2.5E-16 129.5 4.0 125 406-537 68-200 (209)
405 2edb_A Netrin receptor DCC; tu 99.2 1.1E-10 3.8E-15 107.6 11.5 57 717-775 45-101 (116)
406 3uto_A Twitchin; kinase, muscl 99.2 8.5E-11 2.9E-15 140.2 13.6 72 710-783 32-103 (573)
407 1va9_A DOWN syndrome cell adhe 99.2 6.1E-11 2.1E-15 110.8 9.8 85 697-781 25-114 (122)
408 1ujt_A KIAA1568 protein; fibro 99.2 1.6E-10 5.4E-15 106.4 12.3 86 696-783 24-113 (120)
409 1x5i_A Neogenin; RGM binding, 99.2 6.1E-11 2.1E-15 111.2 9.7 86 641-776 27-112 (126)
410 3v6o_A Leptin receptor; recept 99.2 5.1E-10 1.7E-14 115.2 17.5 132 603-782 68-204 (206)
411 2cqv_A MLCK, myosin light chai 99.2 2.3E-10 7.8E-15 105.4 13.4 101 545-648 7-107 (114)
412 2ede_A Netrin receptor DCC; tu 99.2 1.4E-10 4.9E-15 106.7 12.0 78 702-781 25-105 (114)
413 1wfu_A Unnamed protein product 99.2 1.3E-10 4.6E-15 106.6 11.6 97 334-436 5-105 (120)
414 1x5l_A Ephrin type-A receptor 99.2 7.6E-11 2.6E-15 108.0 9.9 82 698-781 21-102 (111)
415 1waa_A Titin; metal binding pr 99.2 1.9E-10 6.4E-15 101.2 11.9 90 450-544 3-92 (93)
416 3t04_D Monobody 7C12; engineer 99.2 1.7E-10 6E-15 103.6 11.9 86 640-772 6-93 (103)
417 3mj8_L Stimulatory hamster ant 99.2 4.5E-11 1.5E-15 124.2 9.2 132 404-537 68-206 (213)
418 3to4_D NKT vbeta2 (mouse varia 99.2 8.4E-10 2.9E-14 118.0 19.0 172 456-628 5-218 (253)
419 2pet_A Lutheran blood group gl 99.2 4.8E-10 1.6E-14 117.9 16.8 120 405-530 76-211 (231)
420 1x5h_A Neogenin; RGM binding, 99.2 3.9E-11 1.3E-15 113.9 7.4 99 685-783 16-115 (132)
421 1qok_A MFE-23 recombinant anti 99.2 3.5E-10 1.2E-14 123.1 16.1 139 405-544 104-268 (282)
422 1nkr_A P58-CL42 KIR; inhibitor 99.2 5.5E-10 1.9E-14 114.7 16.6 123 404-531 61-184 (201)
423 1dr9_A B7-1 (CD80), T lymphocy 99.1 3.3E-10 1.1E-14 116.3 14.9 131 404-539 63-196 (201)
424 3irg_A Titin; IG-like, titin, 99.1 2.7E-10 9.1E-15 102.0 12.4 94 450-543 3-98 (100)
425 3shs_A HOC head outer capsid p 99.1 7.3E-10 2.5E-14 112.7 16.5 158 458-636 8-177 (304)
426 1bec_A 14.3.D T cell antigen r 99.1 8.6E-10 2.9E-14 116.6 18.0 171 456-629 3-212 (238)
427 1f3r_B FV antibody fragment; I 99.1 1.2E-10 4.3E-15 124.8 11.6 143 405-547 77-248 (257)
428 2kdg_A Myotilin; immonoglobuli 99.1 1.7E-10 6E-15 103.3 10.8 95 451-545 4-99 (100)
429 3knb_A Titin; IG-like, titin, 99.1 3.3E-10 1.1E-14 101.2 12.4 85 556-640 13-99 (100)
430 3umt_A SCFV heavy chain and li 99.1 4.8E-10 1.6E-14 120.1 16.1 141 405-546 80-247 (256)
431 1p6f_A NKP46, natural cytotoxi 99.1 7E-10 2.4E-14 117.3 17.1 132 404-545 58-192 (242)
432 1wit_A Twitchin 18TH IGSF modu 99.1 1.5E-10 5E-15 102.2 9.9 90 452-543 2-93 (93)
433 1u2h_A APEG-1, aortic preferen 99.1 2.9E-10 1E-14 101.6 12.0 94 451-544 4-98 (99)
434 2ee3_A Collagen alpha-1(XX) ch 99.1 1.3E-10 4.4E-15 104.9 9.5 57 718-775 34-90 (108)
435 4frw_A Poliovirus receptor-rel 99.1 4.2E-10 1.4E-14 116.8 14.9 132 405-543 78-210 (218)
436 1x5y_A Myosin binding protein 99.1 1.5E-10 5E-15 106.1 9.9 99 344-443 5-103 (111)
437 1ypz_F T-cell receptor gamma c 99.1 4E-10 1.4E-14 118.5 14.6 173 456-632 5-219 (230)
438 2bk8_A Connectin, M1, titin he 99.1 6.9E-10 2.4E-14 98.7 14.0 89 456-544 5-94 (97)
439 3b83_A Ten-D3; beta sheet, com 99.1 1E-10 3.6E-15 104.5 8.5 57 718-775 28-85 (100)
440 2edj_A Roundabout homolog 2; K 99.1 1.8E-10 6.1E-15 103.2 10.1 94 450-546 6-100 (100)
441 2edd_A Netrin receptor DCC; tu 99.1 3.1E-10 1.1E-14 105.6 11.8 97 640-782 17-115 (123)
442 1mq8_A ICAM-1, intercellular a 99.1 4.8E-11 1.6E-15 128.7 7.0 217 407-644 51-286 (291)
443 2yuw_A Myosin binding protein 99.1 2.2E-10 7.4E-15 104.7 10.4 97 346-443 6-102 (110)
444 3s96_B 3B5H10 FAB light chain; 99.1 1.7E-10 5.7E-15 120.3 10.8 132 405-536 74-212 (218)
445 1fhg_A Telokin; immunoglobulin 99.1 4.9E-10 1.7E-14 109.4 13.3 101 450-550 39-140 (154)
446 1vca_A VCAM-D1,2, human vascul 99.1 4.5E-10 1.5E-14 115.3 13.5 134 405-547 53-200 (202)
447 2ee2_A Contactin-1; neural cel 99.1 2.2E-10 7.6E-15 106.4 9.8 93 685-781 16-110 (119)
448 2dbj_A Proto-oncogene tyrosine 99.1 1.6E-10 5.5E-15 108.2 8.9 82 698-781 30-115 (124)
449 2e7c_A Myosin-binding protein 99.1 7.6E-10 2.6E-14 102.5 13.3 100 543-643 19-118 (118)
450 2edy_A Receptor-type tyrosine- 99.1 2E-10 6.9E-15 103.5 9.0 92 686-781 8-100 (103)
451 2dm2_A Palladin; beta-sandwich 99.1 2.7E-10 9.1E-15 104.1 9.8 98 450-547 6-105 (110)
452 3juy_B 3B3 single chain varian 99.1 1.3E-09 4.5E-14 116.7 16.8 127 406-532 85-244 (256)
453 2p1y_A Bispecific alpha/beta T 99.1 1.6E-09 5.6E-14 114.4 17.2 127 405-531 72-222 (238)
454 1jbj_A CD3 epsilon and gamma e 99.1 1.8E-10 6.1E-15 116.7 9.1 115 405-534 43-179 (186)
455 1nct_A Titin; cell adhesion, g 99.1 1.4E-10 4.8E-15 105.1 7.4 94 450-543 12-105 (106)
456 2ic2_A CG9211-PA, GH03927P; IH 99.1 2.5E-10 8.6E-15 104.7 9.0 94 345-443 3-108 (115)
457 3qht_C Monobody YSMB-1; fibron 99.1 3.7E-10 1.3E-14 100.3 9.8 84 641-774 4-87 (97)
458 1q9r_B S25-2 FAB (IGG1K) heavy 99.1 5.6E-10 1.9E-14 116.7 12.8 135 405-540 80-219 (222)
459 2dlh_A Receptor-type tyrosine- 99.1 1.7E-10 5.7E-15 107.6 7.7 83 696-781 27-112 (121)
460 2lu7_A Obscurin-like protein 1 99.1 3.7E-10 1.3E-14 96.8 9.3 82 459-545 3-84 (84)
461 1uen_A KIAA0343 protein; immun 99.1 1.3E-10 4.5E-15 109.1 6.8 86 696-781 23-116 (125)
462 1ypz_E T cell receptor delta, 99.1 1.5E-09 5.3E-14 111.8 15.4 165 456-629 5-198 (207)
463 1x5a_A Ephrin type-A receptor 99.1 6.1E-10 2.1E-14 100.9 10.4 57 720-782 42-99 (107)
464 1wj3_A KIAA1496 protein; beta 99.1 6.9E-10 2.4E-14 102.3 11.0 93 683-780 14-107 (117)
465 3gkz_A Anti-methamphetamine si 99.1 2.1E-09 7.2E-14 115.1 16.5 140 405-545 85-250 (257)
466 3tv3_L PGT128 light chain, IG 99.1 1.4E-10 4.8E-15 120.2 6.8 130 405-537 67-204 (211)
467 3qp3_A Titin; I-SET IG-like, s 99.0 8.3E-10 2.8E-14 99.4 10.9 97 542-641 5-101 (103)
468 3kvq_A Vascular endothelial gr 99.0 2.9E-10 1E-14 103.4 8.0 95 451-547 9-103 (108)
469 2crz_A Fibronectin type-III do 99.0 9.6E-10 3.3E-14 100.3 11.4 98 341-446 5-102 (110)
470 3qhz_H Human monoclonal antibo 99.0 1.7E-09 5.7E-14 113.9 14.8 170 459-638 7-227 (232)
471 2ocf_D Fibronectin; estrogen r 99.0 5.6E-10 1.9E-14 103.4 9.7 87 639-775 26-112 (121)
472 3tv3_H PGT128 heavy chain, IG 99.0 1.8E-09 6.1E-14 114.3 15.0 170 459-637 7-234 (239)
473 2eo9_A Roundabout homolog 1; b 99.0 5E-10 1.7E-14 103.8 9.3 97 450-549 6-103 (118)
474 3d9a_L Light chain of hyhel10 99.0 3.5E-10 1.2E-14 117.4 8.9 124 406-534 71-203 (213)
475 2if7_A SLAM family member 6; N 99.0 3E-09 1E-13 108.3 15.6 115 404-537 68-185 (193)
476 2dm3_A KIAA0992 protein, palla 99.0 3.6E-10 1.2E-14 103.2 7.9 99 450-548 7-106 (110)
477 1x4z_A Biregional cell adhesio 99.0 1.1E-09 3.8E-14 101.9 11.2 102 337-443 10-113 (121)
478 3nl4_L Antigen binding fragmen 99.0 8.3E-10 2.8E-14 114.5 11.4 121 405-528 70-198 (213)
479 2cum_A Tenascin-X; hexabrachio 99.0 2E-09 6.9E-14 97.1 12.4 82 640-773 6-87 (105)
480 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 3.9E-09 1.3E-13 113.0 16.9 138 404-543 74-247 (256)
481 2rb8_A Tenascin; beta sheet,lo 99.0 1.2E-09 4.1E-14 98.4 10.8 56 718-774 29-85 (104)
482 3u2s_H PG9 heavy chain; greek 99.0 2.4E-09 8.2E-14 113.8 15.1 170 458-636 5-234 (248)
483 1oga_E TRBC1, T-cell receptor 99.0 6.4E-09 2.2E-13 111.0 18.5 174 455-631 6-220 (252)
484 2kbg_A N-CAM 2, neural cell ad 99.0 5.5E-10 1.9E-14 101.3 8.3 87 346-435 7-93 (114)
485 2yuv_A Myosin-binding protein 99.0 2.2E-09 7.6E-14 96.0 12.2 91 451-546 6-97 (100)
486 2ckn_A Basic fibroblast growth 99.0 7.9E-10 2.7E-14 97.8 9.1 88 450-542 7-94 (95)
487 1x44_A Myosin-binding protein 99.0 1.6E-09 5.3E-14 97.6 11.1 91 452-547 7-99 (103)
488 1sy6_A T-cell surface glycopro 99.0 4.1E-10 1.4E-14 115.8 8.2 126 404-542 47-202 (204)
489 1lk3_L 9D7 light chain; antige 99.0 6.1E-10 2.1E-14 115.2 9.4 124 406-534 70-202 (210)
490 1wis_A KIAA1514 protein; FNIII 99.0 7.4E-10 2.5E-14 103.6 9.0 102 338-441 8-114 (124)
491 3teu_A Fibcon; FN3 domain, fib 99.0 1.7E-09 6E-14 96.2 11.0 56 717-773 27-83 (98)
492 2zg1_A Sialic acid-binding IG- 99.0 2.6E-09 9E-14 110.7 14.0 126 405-541 81-210 (214)
493 2gki_A Nuclease; anti-DNA anti 99.0 2.8E-09 9.6E-14 116.4 14.8 143 405-547 100-275 (291)
494 4acp_A IG gamma-1 chain C regi 99.0 7.2E-10 2.5E-14 116.7 9.7 173 453-628 24-217 (240)
495 1wwb_X Protein (brain derived 99.0 3.4E-09 1.2E-13 95.2 12.7 83 465-547 14-101 (103)
496 1q0x_L FAB 9B1, light chain; a 99.0 7.4E-10 2.5E-14 114.8 9.5 124 406-533 73-204 (212)
497 3ry4_A Low affinity immunoglob 99.0 2.6E-09 9E-14 106.1 13.1 118 405-542 50-169 (170)
498 2yux_A Myosin-binding protein 99.0 3.9E-10 1.3E-14 104.8 6.5 103 335-442 8-110 (120)
499 1gxe_A Myosin binding protein 99.0 8.7E-10 3E-14 104.6 9.0 86 458-543 24-138 (139)
500 2lvc_A Obscurin-like protein 1 99.0 8.9E-10 3E-14 96.1 8.3 87 451-542 3-91 (91)
No 1
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=3e-35 Score=340.12 Aligned_cols=361 Identities=22% Similarity=0.365 Sum_probs=281.8
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEEC--CEEeec-----CCcEEEEecCCeeEEEEeecCCCCCEEEE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GFEIFS-----SRRQRIVTDNDISTLIIHQAALMDEGEIK 524 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~~~~-----~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~ 524 (1101)
+|.+.. +.+..+.+|++++|.|.+.|.|.+.|+|+++ |..+.. ..++.+....+...|.|.++...|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 355554 6677888899999999999999999999999 888764 45666665566779999999999999999
Q ss_pred EEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCC--ceEEEeecc
Q psy8139 525 CTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGG--RYEITHTDR 602 (1101)
Q Consensus 525 C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~~~~ 602 (1101)
|.|.|..|.....+.|.|..+|.+..++. ...+..|+.+.|.|.+.|.|.+.+.|+++|..+.... ++.+...+.
T Consensus 80 C~a~n~~g~~~~~~~l~V~~~P~~~~~~~---~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~ 156 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEYAPKFISNQT---IYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGR 156 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEEEEEECCSCC---EEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSS
T ss_pred EEEEeCCCCcceEEEEEEEeCCEEecCcc---eEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCC
Confidence 99999999988889999999888765432 2357789999999999999999999999999987543 566666666
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEc
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFR 682 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~ 682 (1101)
...|.|.++...|.|.|+|.|.|..|.......+.+..+|.+|.++.+.....+++.|+|.+|..
T Consensus 157 ~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~--------------- 221 (389)
T 2jll_A 157 KMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDS--------------- 221 (389)
T ss_dssp CEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSC---------------
T ss_pred EEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCC---------------
Confidence 78999999999999999999999999988888888888999998888877777777777776543
Q ss_pred CCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEE
Q psy8139 683 PPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRI 762 (1101)
Q Consensus 683 ~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 762 (1101)
++|.++.+|.|+|+..+...|...... .....++|.+|.|++.|.|+|
T Consensus 222 -------------------------------~~g~pi~~y~v~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~~y~~~v 269 (389)
T 2jll_A 222 -------------------------------HGGVPIHHYQVDVKEVASEIWKIVRSH-GVQTMVVLNNLEPNTTYEIRV 269 (389)
T ss_dssp -------------------------------CTTSCEEEEEEEEEETTCSCCEEEECS-TTCSEEEECSCCTTCEEEEEE
T ss_pred -------------------------------CCCcceEEEEEEEEECCCcccEEeecc-CCcceEEECCccCCCEEEEEE
Confidence 344567788888888877788765442 456889999999999999999
Q ss_pred EEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc-cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhce
Q psy8139 763 TAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR-ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTF 841 (1101)
Q Consensus 763 ~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~-~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 841 (1101)
.|.|..|.|.+|....+.+.. ..|+.||.... ...++++.+.|.|+. ..++++.
T Consensus 270 ~A~N~~G~~~~s~~~~~~t~~--~~~p~~p~~~~~~~~~~~v~l~W~~p~------------~~~~~i~----------- 324 (389)
T 2jll_A 270 AAVNGKGQGDYSKIEIFQTLP--VREPSPPSIHGQPSSGKSFKLSITKQD------------DGGAPIL----------- 324 (389)
T ss_dssp EEEESSCBCCCCCCEEEECCC--CCCCCCCCEEEEEETTTEEEEEECCCC------------CCSSCCC-----------
T ss_pred EEEcCCccCCCCcceEEEecC--CCCCCCCccccccCcCCEEEEEEECCC------------CCCCccc-----------
Confidence 999999998887665444333 45777776554 446677788897743 3456677
Q ss_pred eeEEeeeeccCCCCCCc-eeeeeccccccCCCCCCCCCccCcccce--eeccccccc
Q psy8139 842 IETISSFRDKYVDNEDD-YDIVETNEHTGTGAPSDNENESDYFPEK--TIDESVYGY 895 (1101)
Q Consensus 842 ~~Y~v~~r~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~ 895 (1101)
.|.|.|+..+ ...|. ...+. +......+.+|.+++.|+ |+|.|..|.
T Consensus 325 -~Y~v~~~~~~-~~~~~~~~~~~-----~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 325 -EYIVKYRSKD-KEDQWLEKKVQ-----GNKDHIILEHLQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp -EEEEEEEC------CCBCCEEC-----TTCCEEEECSCCTTCEEEEEEEEEC-CCB
T ss_pred -EEEEEEEeCC-CCcceeEeecc-----CCcceEEeCCcCCCCEEEEEEEEEcCCcC
Confidence 8999998854 33454 22231 122223344555999999 999999998
No 2
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=350.27 Aligned_cols=439 Identities=13% Similarity=0.060 Sum_probs=275.3
Q ss_pred CCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCC-CEEEEEEEEeCCCceEEE-EEEe---
Q psy8139 467 DEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMD-EGEIKCTATNRAGHSITK-ARLR--- 541 (1101)
Q Consensus 467 g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d-~g~Y~C~a~n~~g~~~~s-~~l~--- 541 (1101)
+.++.|.|.+.|.|.|.+.|.++|..+.... ...+.|..+...+ .+.|.|.+.|..|..... ..+.
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~---------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~ 161 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWN---------RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHP 161 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCE---------EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSC
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCcee---------EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecc
Confidence 4578999999999999999999987653221 1145555442333 477888877777754432 1121
Q ss_pred eccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeE-EE--ECCeecCCCCceEEEeecceEEEEEccCCCCCCeE
Q psy8139 542 LEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTAR-WL--HNGEPLTSGGRYEITHTDRYLNLRISDARRADRGE 618 (1101)
Q Consensus 542 V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~-W~--~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~ 618 (1101)
+..+|.+..+ ....+..|..+.|.|.+.|.|.|.+. |. ++|..+.......+......++|.|.++.+.|.|.
T Consensus 162 ~~~~p~~~~~----~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~ 237 (731)
T 2v5y_A 162 CTRTPHFLRI----QNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGK 237 (731)
T ss_dssp CSSSCEECCC----CCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEE
T ss_pred cccccccccc----cceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeE
Confidence 2245555422 35688899999999999999999998 77 57766643222222222235789999999999999
Q ss_pred EEEEEEeCCCC-ceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcC--------------
Q psy8139 619 YQAHGVNSLGE-DVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRP-------------- 683 (1101)
Q Consensus 619 y~c~A~N~~G~-~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~-------------- 683 (1101)
|+|.|.|..|. .+..+.+.|..+|.+|..+.+...+.+++.|+|.++..+++.+|.+|.|+|...
T Consensus 238 Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~~~~~~~~~~ 317 (731)
T 2v5y_A 238 YRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTS 317 (731)
T ss_dssp EEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCEEEEECCSSE
T ss_pred EEEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCceEEeccCcce
Confidence 99999999998 566788999999999999999999999999999988777778999999987211
Q ss_pred -------------------------CCCCCCCcc------cC-CCC------CCCCceEEEEeeCCCCCC-CCCcceEEE
Q psy8139 684 -------------------------PGPPGKPQL------LP-DSP------SLDRDVFTIRWEPPEYDG-GSPVLGYLV 724 (1101)
Q Consensus 684 -------------------------~~~p~~p~~------~~-~~~------~~~~~si~l~W~pP~~~~-~~~i~~Y~V 724 (1101)
.++++.+.. .| .+| .+++++++|+|++|..+. ++++.+|.|
T Consensus 318 ~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v 397 (731)
T 2v5y_A 318 YKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTV 397 (731)
T ss_dssp EEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEE
T ss_pred EEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEE
Confidence 111121111 01 111 457899999999985432 467889999
Q ss_pred EEEeCCCCCcee----ecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCc-ccc-cc
Q psy8139 725 EHRRTGSPYWVR----ASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPS-FIR-AL 798 (1101)
Q Consensus 725 ~~~~~~~~~~~~----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~-~~~-~~ 798 (1101)
.|+......+.. ........+.++|.+|.|++.|.|+|.|.|..|.|+ |....+ .+.++.|..||. .+. ..
T Consensus 398 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~--~T~~~~P~~p~~~~~~~~~ 474 (731)
T 2v5y_A 398 HYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIV--QTDEDLPGAVPTESIQGST 474 (731)
T ss_dssp EEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEE--ECCCCCCCCCCTTTCEEEE
T ss_pred EEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEE--EccCCCCCCCCcceEEeee
Confidence 999876443321 123336678999999999999999999999999974 443322 233466666653 333 33
Q ss_pred cccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCC-------ceeeeeccccccCC
Q psy8139 799 HDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNED-------DYDIVETNEHTGTG 871 (1101)
Q Consensus 799 ~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~-------~~~~v~~~~~~~~~ 871 (1101)
.++++.+.|.||... ++++. .|.|.|+.......+ ....+ .+..
T Consensus 475 ~~~si~l~W~~P~~~------------~g~i~------------~Y~V~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 525 (731)
T 2v5y_A 475 FEEKIFLQWREPTQT------------YGVIT------------LYEITYKAVSSFDPEIDLSNQSGRVSK-----LGNE 525 (731)
T ss_dssp ETTEEEEECCCCSCC------------SSCCC------------EEEEEEEEEEECC---CCCCCEEEEEE-----ETTC
T ss_pred cCCeEEEEEcCCCCC------------CCCcc------------ceEEEEEECcCCCccccccCcceEEee-----cCCc
Confidence 366788899886432 45566 888888776543221 11111 1222
Q ss_pred CCCCCCCccCcccce--eeccccccc--CceeecccCCCCccCCCCCChh-hhhhhhhhhccc-cccccccchhhccccc
Q psy8139 872 APSDNENESDYFPEK--TIDESVYGY--DTIVYGYDSDDLDRHYPTLDEE-EEEEDRESLVKD-RESSVKGKEEEAKVIK 945 (1101)
Q Consensus 872 ~~~~l~~~~~~t~Y~--V~a~n~~G~--~~~v~~~t~e~~P~~~P~~v~~-~~~~~n~t~v~v-p~~~~nG~i~gY~I~~ 945 (1101)
+...+.+|.+++.|. |+|.|..|. +..+...|.+++|..+|.++.. ...+.++..|.| |+...||.|++|+|
T Consensus 526 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp~~~~g~I~~Y~v-- 603 (731)
T 2v5y_A 526 THFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQI-- 603 (731)
T ss_dssp CEEEECSCCTTEEEEEEEEEEETTEEEEEEEEEEECCCCCCCC-------------------------------------
T ss_pred ceEEecCCCCCCEEEEEEEEEeCCccCCCcccEEEcCCCCCCCCCcccccccccCCceEEEEEeCCCCCCCceEEEEE--
Confidence 334455555999999 999999997 4456777888888777655432 233223445555 78889999999999
Q ss_pred chhhhhhccc
Q psy8139 946 DDEYYENLGD 955 (1101)
Q Consensus 946 ~~~~y~~~~~ 955 (1101)
+|+..+.
T Consensus 604 ---~~~~~~~ 610 (731)
T 2v5y_A 604 ---VVEEERP 610 (731)
T ss_dssp ----------
T ss_pred ---EEEecCC
Confidence 6665543
No 3
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.98 E-value=2.5e-30 Score=287.85 Aligned_cols=285 Identities=31% Similarity=0.521 Sum_probs=241.7
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecC-CcEEEEe-cCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSS-RRQRIVT-DNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~-~~~~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.+|.|...|.++.+..|++++|.|.+.|.|.+.+.|++++..+... .++.+.. .++...|.|.++...|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 5788998999999999999999999999999999999999988654 3444433 4566799999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCccccCCC--CCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEE
Q psy8139 529 NRAGHSITKARLRLEAPPTIRLPKQ--YEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNL 606 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~~~~~--~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl 606 (1101)
|..|.....+.|.|..+|.+..++. ......+..|..+.|.|.+.|.|.+.+.|++++..+..+.++.+...+...+|
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l 162 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEE
T ss_pred cCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEE
Confidence 9999888888999988776654431 12345778899999999999999999999999999887777877777778899
Q ss_pred EEcc-CCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCC
Q psy8139 607 RISD-ARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPG 685 (1101)
Q Consensus 607 ~i~~-l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~ 685 (1101)
.|.+ +...|.|.|+|.|.|..|....+..+.|..+|.+|.++.+....++++.|+|.+|..
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~------------------ 224 (305)
T 2nzi_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPAS------------------ 224 (305)
T ss_dssp EETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSC------------------
T ss_pred EEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCcc------------------
Confidence 9999 999999999999999999999999999999999998888777777777777776543
Q ss_pred CCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEE
Q psy8139 686 PPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAE 765 (1101)
Q Consensus 686 ~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 765 (1101)
+++.+++.|.|++++.....|..... .....++|.+|.+++.|.|+|.|.
T Consensus 225 ----------------------------~g~~~i~~y~v~~~~~~~~~w~~~~~--~~~~~~~i~~l~~~~~y~~~~~A~ 274 (305)
T 2nzi_A 225 ----------------------------DGGSKITNYIVEKCATTAERWLRVGQ--ARETRYTVINLFGKTSYQFRVIAE 274 (305)
T ss_dssp ----------------------------CSBSCEEEEEEEEEETTSCCEEEEEE--ESSSEEEECSCCSSCEEEEEEEEE
T ss_pred ----------------------------CCCCceeEEEEEEecCCCCccEECcc--ccCceEEecCCCCCCeEEEEEEEE
Confidence 34456778888888887778887665 347889999999999999999999
Q ss_pred cCCccCCCCCCCCcEEec
Q psy8139 766 NVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 766 n~~G~g~~S~~s~~~t~~ 783 (1101)
|..|.|.+|..+..+++.
T Consensus 275 N~~G~~~~S~~~~~~~t~ 292 (305)
T 2nzi_A 275 NKFGLSKPSEPSEPTITK 292 (305)
T ss_dssp ETTEECCCCCCCCCEECC
T ss_pred eCCcccCCcCCCCCEEcC
Confidence 999999999988877643
No 4
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=317.68 Aligned_cols=407 Identities=16% Similarity=0.204 Sum_probs=250.4
Q ss_pred ceEEcCcccc--ccceEEEcCccCCc-cEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeE
Q psy8139 394 YWVRASPHMV--EDTELMVSGLEPGW-RYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKV 470 (1101)
Q Consensus 394 ~w~~~~~~~~--~~~~l~i~~L~p~d-~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v 470 (1101)
.|.+.+.... ....+.|..+..++ .+.|+|.+.|..|.... ..+.+... ....+|.|. .+.++.+..|+++
T Consensus 109 ~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~----~~v~~~~~-~~~~~p~~~-~~~~~~v~~G~~v 182 (731)
T 2v5y_A 109 IWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAI----DEVKVLGH-PCTRTPHFL-RIQNVEVNAGQFA 182 (731)
T ss_dssp EEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEE----CCBEEESS-CCSSSCEEC-CCCCEEEETTSCE
T ss_pred eEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEE----eeEEeeec-ccccccccc-cccceEEeCCCcE
Confidence 4665553321 23457777663444 58999988887775432 12233221 234667776 6678999999999
Q ss_pred EEEEEEeccCCCeEE-EE--ECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCc-eEEEEEEeeccCC
Q psy8139 471 EFTVQVEGIPTPKVS-WY--KDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGH-SITKARLRLEAPP 546 (1101)
Q Consensus 471 ~L~C~~~g~p~~~v~-W~--~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~-~~~s~~l~V~~~p 546 (1101)
+|.|.+.|.|.|.+. |+ ++|..+.......+......++|.|.++.+.|.|.|+|.|.|..|. .+..+.|.|..+|
T Consensus 183 ~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P 262 (731)
T 2v5y_A 183 TFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPP 262 (731)
T ss_dssp EEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCC
T ss_pred EEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCC
Confidence 999999999999988 77 5776554322111111122468999999999999999999999998 5566889999888
Q ss_pred ccccCCCCCCCeEEeeCCEEEEEEEEeecC--CC----eeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEE
Q psy8139 547 TIRLPKQYEDGLLFEMGEIIKLKVSMAGMP--PP----TARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQ 620 (1101)
Q Consensus 547 ~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p--~~----~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~ 620 (1101)
.++.++.. .......+.|.|.....+ .+ .|.|...+. .+.........++.|.+|.+++.|.|+
T Consensus 263 ~~~~~p~~----~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~------~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 332 (731)
T 2v5y_A 263 VPIAPPQL----ASVGATYLWIQLNANSINGDGPIVAREVEYCTASG------SWNDRQPVDSTSYKIGHLDPDTEYEIS 332 (731)
T ss_dssp CBSSCCEE----EEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSS------SCEEEEECCSSEEEECSCCTTCEEEEE
T ss_pred CCCCCcce----eccCCceEEEEeCCcccCCCCccEEEEEEEEECCC------CceEEeccCcceEEEeCCCCCCEEEEE
Confidence 76554431 222345566777653221 11 455654321 122222334578999999999999999
Q ss_pred EEEE--eCCCCceeEEEEEEec----CCCCCCccEEEEecCCeEEEEeecCCCCC-CcccceeEEEEEcC----------
Q psy8139 621 AHGV--NSLGEDVASFLVTVTD----RPLPPGKAKVVMTLGKSVTLSWSEPEDDG-GCKIGNYIVEYFRP---------- 683 (1101)
Q Consensus 621 c~A~--N~~G~~~~s~~l~v~~----~P~~P~~~~~~~~~~~sv~lsW~~p~~~~-g~~i~~Y~v~~~~~---------- 683 (1101)
|.|. |..|.+..+..+.+.. +|.+|.++.+...+.+++.|+|++|..++ .+.+.+|.|+|...
T Consensus 333 V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~ 412 (731)
T 2v5y_A 333 VLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREE 412 (731)
T ss_dssp EEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEE
T ss_pred EEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCcccee
Confidence 9999 9999887655454443 45788899999999999999999886432 24667787766211
Q ss_pred ----------------------------------------------CCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCC
Q psy8139 684 ----------------------------------------------PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGS 717 (1101)
Q Consensus 684 ----------------------------------------------~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~ 717 (1101)
.++|+.|+........+.+++.|+|++|... ++
T Consensus 413 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~~~P~~p~~~~~~~~~~~~si~l~W~~P~~~-~g 491 (731)
T 2v5y_A 413 VSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQT-YG 491 (731)
T ss_dssp EECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEECCCEEEECCCCCCCCCCTTTCEEEEETTEEEEECCCCSCC-SS
T ss_pred EEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCCCceEEEEccCCCCCCCCcceEEeeecCCeEEEEEcCCCCC-CC
Confidence 1122222211100012367999999998654 45
Q ss_pred CcceEEEEEEeCCCCC-------ceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCC
Q psy8139 718 PVLGYLVEHRRTGSPY-------WVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAA 790 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~~~~-------~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~ 790 (1101)
+|.+|.|+|+..+... +..........++++|.+|.|++.|.|+|.|.|..|.|++|. ....+....|..
T Consensus 492 ~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~---~~~~T~~~~P~~ 568 (731)
T 2v5y_A 492 VITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPAT---NQFTTKISAPSM 568 (731)
T ss_dssp CCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEE---EEEECCCCCCCC
T ss_pred CccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcc---cEEEcCCCCCCC
Confidence 7999999998765321 111122235678999999999999999999999999988873 222333355555
Q ss_pred CCcccc---cccccceeccccCCCCCCccccce
Q psy8139 791 APSFIR---ALHDTTALEDEKPRNTNNCDYESK 820 (1101)
Q Consensus 791 ~p~~~~---~~~~s~~~~~w~p~~~~~~~~~~~ 820 (1101)
|+.... ....+++.+.|.||...++.+..|
T Consensus 569 p~~~~~~~~~~~~~si~l~W~pp~~~~g~I~~Y 601 (731)
T 2v5y_A 569 PAYELETPLNQTDNTVTVMLKPAHSRGAPVSVY 601 (731)
T ss_dssp ---------------------------------
T ss_pred CCcccccccccCCceEEEEEeCCCCCCCceEEE
Confidence 544332 345667788998876555544444
No 5
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.97 E-value=7.4e-29 Score=301.10 Aligned_cols=396 Identities=19% Similarity=0.252 Sum_probs=284.4
Q ss_pred hhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEE
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYL 384 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~ 384 (1101)
.+.|.|.++...|+|.|+|.|.|..|...+. ..+.+...+.+|.-...+..........++|.|... |.+...
T Consensus 60 ~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~-~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~----g~p~~~-- 132 (570)
T 3b43_A 60 VASLVINKVDHSDVGEYTCKAENSVGAVASS-AVLVIKERKLPPSFARKLKDVHETLGFPVAFECRIN----GSEPLQ-- 132 (570)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEE-EEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEE----SSSSCE--
T ss_pred EEEEEEccCChhhCEEEEEEEEeCCceEEEE-EEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEc----cCCCCE--
Confidence 4679999999999999999999988876544 333443333333211111100112244566776653 111111
Q ss_pred EEEEecCC----CceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCc
Q psy8139 385 VEHRRTGS----PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALH 460 (1101)
Q Consensus 385 v~~~~~~~----~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~ 460 (1101)
+.|...+. ...... ........|.|.++.+.|.|.|+|.|.|..|....+ ..+++.. ...||.+...|.
T Consensus 133 v~W~k~g~~l~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~---~~l~v~~---~~~pp~~~~~p~ 205 (570)
T 3b43_A 133 VSWYKDGELLKDDANLQT-SFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSS---AKLTLSE---HEVPPFFDLKPV 205 (570)
T ss_dssp EEEEETTEECCCCSSEEE-EEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE---EEEEEEC---CCCCCEEEECCC
T ss_pred EEEEECCEECcCCCCEEE-EEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEE---EEEEEcC---CCCCCccccCCc
Confidence 22211110 000000 001123579999999999999999999998865322 2233322 245788888888
Q ss_pred eeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEE
Q psy8139 461 DTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARL 540 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l 540 (1101)
+..+..|++++|.|.+.|.|.+.++|++++..+.....+.+....+...|.|.++...|+|.|+|.|.|..|....++.|
T Consensus 206 ~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 285 (570)
T 3b43_A 206 SVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQL 285 (570)
T ss_dssp CBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEE
Confidence 88899999999999999999999999999999987777777666666799999999999999999999999999889999
Q ss_pred eeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEE
Q psy8139 541 RLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQ 620 (1101)
Q Consensus 541 ~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~ 620 (1101)
.|..+|.+...... ...+..|+.+.|.|.+.|.|.+.+.|+++|..+..+..+.+...+....|.|.++...|.|.|+
T Consensus 286 ~V~~~p~~~~~~~~--~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 363 (570)
T 3b43_A 286 GVQEPPRFIKKLEP--SRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYT 363 (570)
T ss_dssp CCBCCCEEEECCCS--BCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred EeecCCcccccCCC--ccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEE
Confidence 99999887544322 2356789999999999999999999999999998877777766666788999999999999999
Q ss_pred EEEEeCCCCceeEEEEEEecCCC---CCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCC
Q psy8139 621 AHGVNSLGEDVASFLVTVTDRPL---PPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSP 697 (1101)
Q Consensus 621 c~A~N~~G~~~~s~~l~v~~~P~---~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~ 697 (1101)
|.|.|..|....+..|.|..+|. .|.. +....+..+.|.|...+.+
T Consensus 364 C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~--~~~~~G~~v~l~C~~~g~P----------------------------- 412 (570)
T 3b43_A 364 CEAHNAAGSASSSTSLKVKEPPVFRKKPHP--VETLKGADVHLECELQGTP----------------------------- 412 (570)
T ss_dssp EEEEBTTBCCEEEEEECEECCCEECSCCCC--EEECTTCCEEEEEEEESSS-----------------------------
T ss_pred EEEEeCCCEEEEEEEEEecCCCeeecCCCc--eeecCCCEEEEEEEEecCC-----------------------------
Confidence 99999999999999999988773 3333 3345678899999853211
Q ss_pred CCCCceEEEEeeCCCCCCCCCc---ceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 698 SLDRDVFTIRWEPPEYDGGSPV---LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 698 ~~~~~si~l~W~pP~~~~~~~i---~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
...+.|.... .++ ..|.+ ... ....++.|.++.+.+.+.|.|.|.|..|.
T Consensus 413 -----~p~v~W~k~g----~~l~~~~~~~~------------~~~--~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~ 465 (570)
T 3b43_A 413 -----PFQVSWHKDK----RELRSGKKYKI------------MSE--NFLTSIHILNVDSADIGEYQCKASNDVGS 465 (570)
T ss_dssp -----SCCCEEEETT----EECCSSSSEEE------------EEE--TTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred -----CCEEEEEECC----EECcCCCCEEE------------EEc--CCEEEEEECCCChhhCEEEEEEEEECCCe
Confidence 1235776421 111 01211 111 23357889999999999999999999996
No 6
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.97 E-value=1.1e-28 Score=299.76 Aligned_cols=395 Identities=21% Similarity=0.301 Sum_probs=280.1
Q ss_pred hhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCC---CCCcccCCCCCCCCCeeEEEEeCCCCCCCcCee
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPP---GKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVL 381 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P---~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~ 381 (1101)
.+.|.|.++...|.|.|.|.|.|..|...++ ..+.+.....+| ..|..+. ......++|.|... |.+..
T Consensus 156 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~~pp~~~~~p~~~~---v~~G~~~~l~C~~~----g~p~p 227 (570)
T 3b43_A 156 VATLQILQTDQSHVGQYNCSASNPLGTASSS-AKLTLSEHEVPPFFDLKPVSVD---LALGESGTFKCHVT----GTAPI 227 (570)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEE-EEEEEECCCCCCEEEECCCCBC---CBSBSCEEEEEEEE----SSSCC
T ss_pred EEEEEECcCChHHCEEEEEEEEeCCcEEEEE-EEEEEcCCCCCCccccCCceeE---ecCCCeEEEEEEEE----ECCCC
Confidence 3568899999999999999999988875443 333333322222 1222211 12345567777653 11111
Q ss_pred EEEEEEEecC-----CCceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeee
Q psy8139 382 GYLVEHRRTG-----SPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFI 456 (1101)
Q Consensus 382 ~Y~v~~~~~~-----~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~ 456 (1101)
. +.|...+ +..... . .......|.|.++++.|+|.|+|.|.|..|... ..+.+.+ ..+|.+.
T Consensus 228 ~--i~W~k~g~~i~~~~~~~~-~-~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~-----~~~~l~V----~~~p~~~ 294 (570)
T 3b43_A 228 K--ITWAKDNREIRPGGNYKM-T-LVENTATLTVLKVTKGDAGQYTCYASNVAGKDS-----CSAQLGV----QEPPRFI 294 (570)
T ss_dssp E--EEEEETTEECCTTSSEEE-E-EETTEEEEEESSBCGGGCEEEEEEEEETTEEEE-----EEEEECC----BCCCEEE
T ss_pred E--EEEEECCEECcCCCcEEE-E-EECCEEEEEEcccCcccCEEEEEEEECCCCcEE-----EEEEEEe----ecCCccc
Confidence 1 2221111 111100 0 011235799999999999999999999888642 2234443 3567776
Q ss_pred ecCc-eeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE
Q psy8139 457 RALH-DTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI 535 (1101)
Q Consensus 457 ~~p~-~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~ 535 (1101)
..+. ...+..|+.+.|.|.+.|.|.+.+.|++++..+.....+.+...+....|.|.++...|+|.|+|.|.|..|...
T Consensus 295 ~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~ 374 (570)
T 3b43_A 295 KKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSAS 374 (570)
T ss_dssp ECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCE
T ss_pred ccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEE
Confidence 5543 345789999999999999999999999999999887777776666777999999999999999999999999999
Q ss_pred EEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCC
Q psy8139 536 TKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRAD 615 (1101)
Q Consensus 536 ~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~ 615 (1101)
.++.|.|..+|.+...+. ...+..|..+.|.|.+.|.|.|.+.|+++|..+..+.++.+...+...+|.|.++...|
T Consensus 375 ~~~~l~V~~~P~~~~~~~---~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D 451 (570)
T 3b43_A 375 SSTSLKVKEPPVFRKKPH---PVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSAD 451 (570)
T ss_dssp EEEEECEECCCEECSCCC---CEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGG
T ss_pred EEEEEEecCCCeeecCCC---ceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhh
Confidence 999999999998876553 45677899999999999999999999999999988888887777667899999999999
Q ss_pred CeEEEEEEEeCCCCceeEEEEEEecCCCCCCcc-EEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccC
Q psy8139 616 RGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKA-KVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLP 694 (1101)
Q Consensus 616 ~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~-~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~ 694 (1101)
.|.|+|.|.|..|.......+.|..+|.....+ ......+..+.|.|...+.
T Consensus 452 ~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~--------------------------- 504 (570)
T 3b43_A 452 IGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGA--------------------------- 504 (570)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESC---------------------------
T ss_pred CEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecC---------------------------
Confidence 999999999999998888888888766321111 1223456778888875321
Q ss_pred CCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccC
Q psy8139 695 DSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFS 771 (1101)
Q Consensus 695 ~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 771 (1101)
....+.|.... +.+. ..+.. ..+. .......+.|.++.+.....|.|.|.|.+|..
T Consensus 505 -------p~~~v~W~k~~----~~~~--------~~~~~-~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 560 (570)
T 3b43_A 505 -------EPISVAWFKDK----GEIV--------RESDN-IWIS-YSENIATLQFSRAEPANAGKYTCQIKNEAGTQ 560 (570)
T ss_dssp -------SSCCCEEEETT----EECC--------CCTTT-EEEC-CCSSEEEEEESSCCTTCCEEEEEEEECSSCEE
T ss_pred -------CCCEEEEEeCC----eEec--------cCCCe-EEEE-ECCCEEEEEECcCCHHHCEEEEEEEEECCcEE
Confidence 11245675421 0000 00001 1111 11344678999999999999999999999973
No 7
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.97 E-value=2e-28 Score=282.73 Aligned_cols=307 Identities=19% Similarity=0.247 Sum_probs=222.1
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
...|.|.++++.|+|.|+|.|.|..|... ..+.+.+. .+|.+...+....+..|+.+.|.|.+.|.|.+.+
T Consensus 62 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~-----~~~~l~V~----~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i 132 (389)
T 2jll_A 62 SSSLHIKDVKLSDSGRYDCEAASRIGGHQ-----KSMYLDIE----YAPKFISNQTIYYSWEGNPINISCDVKSNPPASI 132 (389)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEE-----EEEEEEEE----EEEEECCSCCEEEECTTCCEEEEECEEEESCCEE
T ss_pred cceEEEcccChhhCEEEEEEEEeCCCCcc-----eEEEEEEE----eCCEEecCcceEEeccCCEEEEEEEEEecCCCeE
Confidence 46899999999999999999999988642 33445443 4566666666667899999999999999999999
Q ss_pred EEEECCEEeecCC--cEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEee
Q psy8139 485 SWYKDGFEIFSSR--RQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEM 562 (1101)
Q Consensus 485 ~W~~~g~~~~~~~--~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~ 562 (1101)
.|+++|..+.... ++.+...+....|.|.++...|.|.|+|.|.|..|.......+.+..+|..+... ......
T Consensus 133 ~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~----~~~~~~ 208 (389)
T 2jll_A 133 HWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGV----KIIELS 208 (389)
T ss_dssp EEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEE----EEEEEC
T ss_pred EEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcce----EEeecc
Confidence 9999999887543 5666666667799999999999999999999999998888888876655422110 112223
Q ss_pred CCEEEEEEEEeec----CC--CeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 563 GEIIKLKVSMAGM----PP--PTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 563 g~~~~l~c~~~g~----p~--~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
+..+.|.|..... |. ..+.|..++... ...+........+.|.+|.+++.|.|+|.|.|..|.+..+..+
T Consensus 209 ~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~----~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~ 284 (389)
T 2jll_A 209 QTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEI----WKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIE 284 (389)
T ss_dssp SSCEEEEEECCSCCTTSCEEEEEEEEEETTCSC----CEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCE
T ss_pred CCEEEEEEeCCCCCCCcceEEEEEEEEECCCcc----cEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcce
Confidence 4667788864321 21 246777765421 1223333445789999999999999999999999987665555
Q ss_pred EEec----CCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCC
Q psy8139 637 TVTD----RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPE 712 (1101)
Q Consensus 637 ~v~~----~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~ 712 (1101)
.+.. +|.+| .+.....+.+++.|+|.+|.
T Consensus 285 ~~~t~~~~~p~~p-~~~~~~~~~~~v~l~W~~p~---------------------------------------------- 317 (389)
T 2jll_A 285 IFQTLPVREPSPP-SIHGQPSSGKSFKLSITKQD---------------------------------------------- 317 (389)
T ss_dssp EEECCCCCCCCCC-CEEEEEETTTEEEEEECCCC----------------------------------------------
T ss_pred EEEecCCCCCCCC-ccccccCcCCEEEEEEECCC----------------------------------------------
Confidence 5543 44555 34444455666666666442
Q ss_pred CCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCC
Q psy8139 713 YDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPL 776 (1101)
Q Consensus 713 ~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 776 (1101)
+++++|.+|.|+|+..+...|..........++++|.+|.|++.|.|+|.|.|..|.|++|..
T Consensus 318 -~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~ 380 (389)
T 2jll_A 318 -DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY 380 (389)
T ss_dssp -CCSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE
T ss_pred -CCCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee
Confidence 345678889999988777677654444467789999999999999999999999999887643
No 8
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=310.06 Aligned_cols=458 Identities=13% Similarity=0.131 Sum_probs=298.6
Q ss_pred ecCceeEEccCCeEEEEEEEe-------ccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 457 RALHDTTALEDEKVEFTVQVE-------GIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 457 ~~p~~~~v~~g~~v~L~C~~~-------g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..|.+..+..|++++|.|.+. +.+.+.|.|.++|..+.... +.. .++..+.|+|.++...|++ |.|.+..
T Consensus 8 i~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~-~~~-~~~~~~~l~i~~~~~~~~~-y~C~~~~ 84 (589)
T 3l5h_A 8 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQ-YTI-INRTASSVTFTDIASLNIQ-LTCNILT 84 (589)
T ss_dssp CSCSCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGG-CBC-CSSSCCBCCCCCCCSSCCC-CCCC-CC
T ss_pred EecCCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHH-ccc-cCCcEeEEEEecCCCccee-eEEeccc
Confidence 356677788999999999997 66778999999997665432 222 2344668999999988765 7788764
Q ss_pred CCC--ceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEe--------
Q psy8139 530 RAG--HSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITH-------- 599 (1101)
Q Consensus 530 ~~g--~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-------- 599 (1101)
... .....+.|.|..+| +.+..|.|...+.....++|..+.... ....|.+..
T Consensus 85 ~~~~~~~~~~~~l~v~~pP----------------~~P~nl~c~~~~~~~~~~~W~~~~~~~-~~~~y~l~~~~~~~~~~ 147 (589)
T 3l5h_A 85 FGQLEQNVYGITIISGLPP----------------EKPKNLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKFA 147 (589)
T ss_dssp TTCC-CCCCCCCCCC-CCC----------------CCCEEEEEEEETTSCEEEEEECCSCCS-SCEEEEECCBCSSSBCC
T ss_pred CCCcccEEEeEEEeccCCC----------------CCCEeeEEEECCCceEEEEECCCCcCC-cCceEEEEEEEcCCCcc
Confidence 211 11223344554444 344678888888778888898743221 111222221
Q ss_pred -----ecceEEEEEc-cCCCCCCeEEEEEEEeCCCCcee-EEEEEEe--cCCCCCCccEEE--EecCCeEEEEeecCCCC
Q psy8139 600 -----TDRYLNLRIS-DARRADRGEYQAHGVNSLGEDVA-SFLVTVT--DRPLPPGKAKVV--MTLGKSVTLSWSEPEDD 668 (1101)
Q Consensus 600 -----~~~~~sl~i~-~l~~~~~y~y~c~A~N~~G~~~~-s~~l~v~--~~P~~P~~~~~~--~~~~~sv~lsW~~p~~~ 668 (1101)
.+...++.+. ++.+...|.|+|.|.|..|.+.. ...+... ..|.+|.++.+. ....+++.|+|++|...
T Consensus 148 ~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~ 227 (589)
T 3l5h_A 148 DCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIK 227 (589)
T ss_dssp CEECBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGG
T ss_pred cCCCCCCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCC
Confidence 1123445566 78889999999999999998633 2233222 368999999884 46788999999988765
Q ss_pred CCcccceeEEEEEcC------------------------------------------CCCC---CCCc------ccC-CC
Q psy8139 669 GGCKIGNYIVEYFRP------------------------------------------PGPP---GKPQ------LLP-DS 696 (1101)
Q Consensus 669 ~g~~i~~Y~v~~~~~------------------------------------------~~~p---~~p~------~~~-~~ 696 (1101)
++ .+..|.|+|... .|++ +.+. ..| .+
T Consensus 228 ~~-~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~ 306 (589)
T 3l5h_A 228 SV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKA 306 (589)
T ss_dssp GT-SCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSC
T ss_pred Ce-eeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCC
Confidence 44 788899988211 1111 1111 011 01
Q ss_pred ----------CCCCCceEEEEeeC-CCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEE
Q psy8139 697 ----------PSLDRDVFTIRWEP-PEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAE 765 (1101)
Q Consensus 697 ----------~~~~~~si~l~W~p-P~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 765 (1101)
...+.+++.|+|+| +..+.+++|.+|.|.|+..+. .|.... ...+.+++ |.|++.|.|+|.|.
T Consensus 307 p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~-~~~~~~---~~~~~~~~--l~~~~~Y~~~V~A~ 380 (589)
T 3l5h_A 307 PSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKS-HLQNYT---VNATKLTV--NLTNDRYLATLTVR 380 (589)
T ss_dssp CCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTS-CCCBCC---CSSSCCEE--CCCSSCCCEEEEEE
T ss_pred CcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCC-Cceeec---cCCceEEE--EeCCCCEEEEEEEE
Confidence 23467899999998 455677889999999987665 333321 34455555 88999999999999
Q ss_pred cCCccCCCCCCCCcEEecCCCCCCCCCcccc-cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeE
Q psy8139 766 NVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR-ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIET 844 (1101)
Q Consensus 766 n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~-~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y 844 (1101)
|..|.|+++... .......|+.||..+. ...++++.+.|.+|.. ++. +|
T Consensus 381 n~~G~~~~s~~~---~~~~~~~~~~p~~~l~~~~~~~si~l~W~~p~~---------------~i~------------~Y 430 (589)
T 3l5h_A 381 NLVGKSDAAVLT---IPACDFQATHPVMDLKAFPKDNMLWVEWTTPRE---------------SVK------------KY 430 (589)
T ss_dssp BTTBCCCCCCCC---CCCTTCCCCSCCCSCEEEECSSSEEEECCCCSS---------------CCS------------CB
T ss_pred eCCccCCCeEEE---eecccccCCCCcceEEEEECCCeEEEEEECCCC---------------Ccc------------EE
Confidence 999998877432 1121123455665554 3345677888987542 233 67
Q ss_pred EeeeeccCCCCC----Cceeeeec-cccccCCCCCCCCCccCcccce--eeccccccc--CceeecccCCCCccCCCCCC
Q psy8139 845 ISSFRDKYVDNE----DDYDIVET-NEHTGTGAPSDNENESDYFPEK--TIDESVYGY--DTIVYGYDSDDLDRHYPTLD 915 (1101)
Q Consensus 845 ~v~~r~~~~~~~----~~~~~v~~-~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~--~~~v~~~t~e~~P~~~P~~v 915 (1101)
.|.|+..+.... |....... ..+. +.+|.+.+.|. |+|.|..|. +..+..+|.+++|..+| ++
T Consensus 431 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~L~p~t~Y~~~V~A~~~~g~g~~~~~~~~t~~~~P~~pp-~l 502 (589)
T 3l5h_A 431 ILEWCVLSDKAPCITDWQQEDGTVHRTYL-------RGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGP-TV 502 (589)
T ss_dssp CCEEEEECSSSCCCEEECCBCSSCCEEEC-------CSCCCSSSEEEEEECBEETTEECCCEEEEEESSCCCCSSCC-CC
T ss_pred EEEEEECCCCCCCccCcEEeeCCcceEEe-------hhccccCcEEEEEEEEEeCCcccCCEEEEEEeccCCCCCCC-eE
Confidence 777766554321 32221111 1122 24455999999 999999987 55677888888888766 68
Q ss_pred hhhhhhhhhhhccc-c--ccccccchhhcccccchhhhhhcccccccccccccCCceeEeecCCCCCCCceeec
Q psy8139 916 EEEEEEDRESLVKD-R--ESSVKGKEEEAKVIKDDEYYENLGDVLTKKYSLPVNSDIQIKIDKPDDEPDYVIKG 986 (1101)
Q Consensus 916 ~~~~~~~n~t~v~v-p--~~~~nG~i~gY~I~~~~~~y~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 986 (1101)
.+...+.++..|.| | +...||.|+||.| +|+..++... .. ........++|.+|.+|+.|.|+.
T Consensus 503 ~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v-----~~~~~~~~~~-~~-~~~~~~~~~~~~~L~p~t~Y~~~V 569 (589)
T 3l5h_A 503 RTKKVGKNEAVLEWDQLPVDVQNGFIRNYTI-----FYRTIIGNET-AV-NVDSSHTEYTLSSLTSDTLYMVRM 569 (589)
T ss_dssp CEECCCSSCBEEBCCCCCHHHHCSCEEEEEE-----CCBCSSCCCC-CE-EECTTCCBCCBCSCCSSCCEECCE
T ss_pred EEeecccceEEEEecCCCHHHcCccceeEEE-----EEEeCCCCeE-EE-EeCCcccEEEecCCCCCCEEEEEE
Confidence 88777444555555 3 6778999999999 8877665433 22 123456688999999999999987
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.94 E-value=2.1e-26 Score=277.15 Aligned_cols=320 Identities=16% Similarity=0.205 Sum_probs=228.3
Q ss_pred hhhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEE
Q psy8139 304 KQAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGY 383 (1101)
Q Consensus 304 ~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y 383 (1101)
..+.|.|.++...|+|.|.|.+.| |. +..+.+.|..+|.+...+..+ .......++|.|.... .+...+
T Consensus 78 ~~~~L~I~~~~~~D~G~Y~C~a~n--g~--~~~~~l~V~~p~~~~~~~~~~---~v~~G~~v~l~C~~~~----~~~~~v 146 (524)
T 2ec8_A 78 KQNEWITEKAEATNTGKYTCTNKH--GL--SNSIYVFVRDPAKLFLVDRSL---YGKEDNDTLVRCPLTD----PEVTNY 146 (524)
T ss_dssp CSSEEEESSCCSTTCEEEEEEETT--SC--EEEEEEECCCSSCSBCCCCCC---CEETTSCEEECCCBSC----CCCSCE
T ss_pred ccceEEEcccchhhCEEEEEeecC--Cc--ceEEEEEECCCCcccccccce---EEEcCCeEEEECcCCC----CccceE
Confidence 456799999999999999999987 43 445666666544433222221 1123455666666541 111111
Q ss_pred EEEEEec---CCCceEEcCccccccceEEEcCccCCccE-EEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecC
Q psy8139 384 LVEHRRT---GSPYWVRASPHMVEDTELMVSGLEPGWRY-QFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRAL 459 (1101)
Q Consensus 384 ~v~~~~~---~~~~w~~~~~~~~~~~~l~i~~L~p~d~y-~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p 459 (1101)
....... ...... .......|.|.+++..|.| .|+|.|.|..|... +..+.+.+...+..+|.+...|
T Consensus 147 ~W~~~~g~~l~~~~~~----~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~----s~~~~l~V~~~~~~~p~i~~~~ 218 (524)
T 2ec8_A 147 SLKGCQGKPLPKDLRF----IPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVL----SEKFILKVRPAFKAVPVVSVSK 218 (524)
T ss_dssp EEECSSSCCCCSSCEE----EEETTTEEEEESCCGGGTTCEEEEEEC----CCC----CCCEECCEECCCCSCCEEECSC
T ss_pred EEEccCCcCcCCCCce----eECCCccEEEeccchhhCCceEEEEEEECCceEE----EEEEEEEEEeCCCCCCcEEecC
Confidence 1111000 000001 0123457999999999999 99999999866432 2345666654556789998888
Q ss_pred ceeEEccCCeEEEEEEEeccCCCe-EEEEECCEEe--ecCCcEEEE---ecCCeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 460 HDTTALEDEKVEFTVQVEGIPTPK-VSWYKDGFEI--FSSRRQRIV---TDNDISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 460 ~~~~v~~g~~v~L~C~~~g~p~~~-v~W~~~g~~~--~~~~~~~~~---~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
.+..+..|++++|.|.+.|.|.+. +.|++++..+ .......+. .......|.|.++...|+|.|+|.|.|..|.
T Consensus 219 ~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 298 (524)
T 2ec8_A 219 ASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGS 298 (524)
T ss_dssp SEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCE
T ss_pred CcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCc
Confidence 888999999999999999999887 9999998763 222222221 1122458999999999999999999999999
Q ss_pred eEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCe-eEEEECCeecCCCC-ceEEEeec----ceEEEE
Q psy8139 534 SITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPT-ARWLHNGEPLTSGG-RYEITHTD----RYLNLR 607 (1101)
Q Consensus 534 ~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~-v~W~~~g~~l~~~~-~~~~~~~~----~~~sl~ 607 (1101)
....+.|.|..+|.+...+.......+..|+.+.|.|.+.|.|.|. +.|+++|..+.... .+.....+ ...+|.
T Consensus 299 ~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~ 378 (524)
T 2ec8_A 299 ANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELH 378 (524)
T ss_dssp EEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEE
T ss_pred eEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEE
Confidence 9889999999988876655444456888999999999999999999 99999999887654 33322222 357899
Q ss_pred EccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCC
Q psy8139 608 ISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRP 642 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P 642 (1101)
|.++...|.|.|+|.|.|..|....+..|.|..+|
T Consensus 379 i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 413 (524)
T 2ec8_A 379 LTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKP 413 (524)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEE
T ss_pred EeecCcccCeEEEEEEEecCceEEEEEEEEEecCC
Confidence 99999999999999999999998888888887654
No 10
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.94 E-value=2.6e-24 Score=265.06 Aligned_cols=469 Identities=13% Similarity=0.086 Sum_probs=266.1
Q ss_pred ccCcceEEEeeecccccccccceeeeccCCCCCC-CCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCC-
Q psy8139 315 ENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPP-GKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGS- 392 (1101)
Q Consensus 315 ~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P-~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~- 392 (1101)
....|-+.|-. |.-|..-..+..+ +.+.|.+| ..+.+ ..++.++++|+|.+|..+++.++. |.|+++...+
T Consensus 132 ~~c~g~~~Cc~-n~cG~~C~~P~~~-~~~~P~~P~~~l~v----~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~ 204 (680)
T 1zlg_A 132 NECSGVKKCCS-NGCGHTCQVPKTL-YKGVPLKPRKELRF----TELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGI 204 (680)
T ss_pred ccCCCcccccc-cccccccccccee-eecccccccccceE----EeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCC
Confidence 34556666633 4444433343333 45666666 55555 267899999999998655677887 9999987633
Q ss_pred -------CceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEc
Q psy8139 393 -------PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTAL 465 (1101)
Q Consensus 393 -------~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~ 465 (1101)
..|..+.. .....++|.+|.|++.|.|+|.|.|..|...++..+..+.......++.+ |.++.+.
T Consensus 205 ~~~~~~~~~w~~v~~--~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~------P~~l~~~ 276 (680)
T 1zlg_A 205 HPSEDDATHWQTVAQ--TTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPA------PANLRLA 276 (680)
T ss_pred CcCccccCceEEEEe--cCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCC------CCceEee
Confidence 46776543 34578999999999999999999999995444433333332211112222 3333321
Q ss_pred cC--CeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 466 ED--EKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 466 ~g--~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
.. ..- +.-...+.|..... . ++.. . .|.+......+.
T Consensus 277 ~~~~~~~-------g~~sv~l~W~pP~~---~--------~g~i-----------~--~Y~V~~~~~~~~---------- 315 (680)
T 1zlg_A 277 NSTVNSD-------GSVTVTIVWDLPEE---P--------DIPV-----------H--HYKVFWSWMVSS---------- 315 (680)
T ss_pred eeeecCC-------CceEEEEEecCCCC---C--------CCce-----------e--EEEEEEEecccc----------
Confidence 11 000 00012455532110 0 0000 0 121111100000
Q ss_pred cCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEE
Q psy8139 544 APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHG 623 (1101)
Q Consensus 544 ~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A 623 (1101)
.. ..+...|.. ....+....++|.+|.+++.|.|++.|
T Consensus 316 -~~-----------------------------~~~~~~~~~------------~~v~~~~~~~~l~~L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 316 -KS-----------------------------LVPTKKKRR------------KTTDGFQNSVILEKLQPDCDYVVELQA 353 (680)
T ss_pred -cc-----------------------------cCCccceEE------------EEEcCCeeEEEeCCCCCCCEEEEEEEE
Confidence 00 000011211 111222467889999999999999999
Q ss_pred EeCCCCceeEE---EEEEecCCCC--CCccEEEEecCCeEEE-----------EeecCCCCCCcccceeEEEEEcCCCCC
Q psy8139 624 VNSLGEDVASF---LVTVTDRPLP--PGKAKVVMTLGKSVTL-----------SWSEPEDDGGCKIGNYIVEYFRPPGPP 687 (1101)
Q Consensus 624 ~N~~G~~~~s~---~l~v~~~P~~--P~~~~~~~~~~~sv~l-----------sW~~p~~~~g~~i~~Y~v~~~~~~~~p 687 (1101)
.|..|.+..+. .+.+.+.+.+ |.++.+...+.+++.| +|.+|...++ +.+|
T Consensus 354 ~n~~G~g~~S~~~~~v~~~T~~~~P~p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~~~--~~~y----------- 420 (680)
T 1zlg_A 354 ITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDG--QLQV----------- 420 (680)
T ss_pred EECCCcCCCCCCceeEEEECCCCCCCccccccccccCccccccccccCCCccccccCCcccCC--cceE-----------
Confidence 99999775433 2555543322 5677777788888877 9998853322 3344
Q ss_pred CCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCC----CCCceeecccccCccEEEEcCCCCCceEEEEEE
Q psy8139 688 GKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTG----SPYWVRASPHMVEDTELMVSGLEPGWRYQFRIT 763 (1101)
Q Consensus 688 ~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~----~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 763 (1101)
.|.|.... ++.+.+|.|.|.+.. ...|..........++++|.+|.|++.|.|+|.
T Consensus 421 -----------------~v~w~~~~---~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~ 480 (680)
T 1zlg_A 421 -----------------KVYWKKTE---DPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQ 480 (680)
T ss_pred -----------------EEEEeCCC---CCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEE
Confidence 45555432 234678888876532 122322222225678999999999999999999
Q ss_pred EEcCCccCCCCCC--------------CCcEEecCCCCCC-----CCCcc----cc--cccccceeccccCCCCCCcccc
Q psy8139 764 AENVVGFSEPGPL--------------SEPLTVTYQRSPA-----AAPSF----IR--ALHDTTALEDEKPRNTNNCDYE 818 (1101)
Q Consensus 764 A~n~~G~g~~S~~--------------s~~~t~~~~~~P~-----~~p~~----~~--~~~~s~~~~~w~p~~~~~~~~~ 818 (1101)
|.|..|.|+.... ...+.......|. .+|.+ +. ..+++ +.+.|.||..
T Consensus 481 A~n~~G~s~~~~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~t-i~lsW~pP~~------ 553 (680)
T 1zlg_A 481 PIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIT-GHFSWKMAKA------ 553 (680)
T ss_pred EecCCCCCCccccceeCCCccccccCCccccccCCCCccccccccCCccccceeEEEeccCce-EEEEecCCCC------
Confidence 9999996542111 0011111111222 56665 22 23334 7788987532
Q ss_pred ceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCC---Cceeeeec-cccccCCCCCCCCCccCcccce--eecccc
Q psy8139 819 SKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNE---DDYDIVET-NEHTGTGAPSDNENESDYFPEK--TIDESV 892 (1101)
Q Consensus 819 ~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~---~~~~~v~~-~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~ 892 (1101)
..++++. +|.|.|+....+.. +....+.. ..+.+......+.+|.+++.|. |+|.|.
T Consensus 554 -----~~ng~I~------------gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~ 616 (680)
T 1zlg_A 554 -----NLYQPMT------------GFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTP 616 (680)
T ss_pred -----CCCCCce------------eEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEEEcC
Confidence 2356677 89998876543321 11111111 1111223345566666999999 999999
Q ss_pred ccc--CceeecccCCCCccCCCCCChhhhhhhhhhhccc-ccccccc-chhhccc
Q psy8139 893 YGY--DTIVYGYDSDDLDRHYPTLDEEEEEEDRESLVKD-RESSVKG-KEEEAKV 943 (1101)
Q Consensus 893 ~G~--~~~v~~~t~e~~P~~~P~~v~~~~~~~n~t~v~v-p~~~~nG-~i~gY~I 943 (1101)
.|. +..+...|.+. +..+|.++.+... + .|.| ||...|| .|++|.|
T Consensus 617 ~G~G~~~~~~~~T~~~-~P~~P~~l~v~~~---~-~l~W~pP~~~~G~~I~~~~~ 666 (680)
T 1zlg_A 617 GGEGPATIKTFRTPEL-PPSSAHRSHLKHR---H-PHHYKPSPERYGKPIPNPLL 666 (680)
T ss_pred CCcCCCcceEEECCCC-CCCCCCCCeEEec---c-ceeECCCCCCCCCccceeeE
Confidence 998 53444555555 4467888888766 3 7888 6666666 4455555
No 11
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.94 E-value=8.4e-24 Score=261.18 Aligned_cols=373 Identities=16% Similarity=0.173 Sum_probs=251.6
Q ss_pred hhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEE
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYL 384 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~ 384 (1101)
.+.|.|.++...|+|.|.|.+.+..+........+.|..++.+|.-... ..........++|.|.... +...+
T Consensus 70 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~-~~~~v~~g~~v~l~C~~~~-----p~~~v- 142 (642)
T 1e07_A 70 NASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSN-NSKPVEDKDAVAFTCEPET-----QDATY- 142 (642)
T ss_pred CCcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEcc-CceeEecCCcEEEEEECCC-----CCeeE-
Confidence 4689999999999999999997654332233355666554433321111 0000123456788887652 22222
Q ss_pred EEEEecCC----CceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCc
Q psy8139 385 VEHRRTGS----PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALH 460 (1101)
Q Consensus 385 v~~~~~~~----~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~ 460 (1101)
.|...+. ...... ......|.|.++...|.|.|+|.|.|..|... +..+.+.+... |+.+...|.
T Consensus 143 -~W~~~g~~l~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~----s~~~~l~V~~~---p~~~~~~~~ 211 (642)
T 1e07_A 143 -LWWVNNQSLPVSPRLQL---SNGNRTLTLFNVTRNDTASYKCETQNPVSARR----SDSVILNVLYG---PDAPTISPL 211 (642)
T ss_pred -EEEECCeECCCCCceEE---cCCCCEEEEeCCCcccCeeEEEEEecCCCCcc----cceEEEEEEeC---CCCcEEecC
Confidence 2211111 001110 12346899999999999999999999887532 34455555422 222334566
Q ss_pred eeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEE--E
Q psy8139 461 DTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITK--A 538 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s--~ 538 (1101)
+..+..|+.+.|.|.+.|.|.+.++|+++|..+.. ...|.|.++...|+|.|+|.|.|..|....+ .
T Consensus 212 ~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~-----------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~ 280 (642)
T 1e07_A 212 NTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQS-----------TQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVT 280 (642)
T ss_pred CcccccCCEEEEEEEcCCCCCcEEEEEECCeEccc-----------CCceEEecccccCCeEEEEEEEeCCCceEEeeeE
Confidence 77889999999999999999999999999987732 1279999999999999999999998876544 4
Q ss_pred EEeeccCC---ccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCC
Q psy8139 539 RLRLEAPP---TIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRAD 615 (1101)
Q Consensus 539 ~l~V~~~p---~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~ 615 (1101)
.|.|..++ .+.. .....+..|+.+.|.|.+.+.| +.+.|+++|..+..+.++.+.. ....|.|.++...|
T Consensus 281 ~v~v~~~~~~p~i~~----~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~--~~~~L~i~~~~~~d 353 (642)
T 1e07_A 281 TITVYAEPPKPFITS----NNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSN--DNRTLTLLSVTRND 353 (642)
T ss_pred EEEEEccCCCCEEEc----CCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeC--CCCEEEEeccCccc
Confidence 56665432 2221 1223455688899999999886 7999999999887666665543 35689999999999
Q ss_pred CeEEEEEEEeCCCCc-eeEEEEEEecCCCCCC--ccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcc
Q psy8139 616 RGEYQAHGVNSLGED-VASFLVTVTDRPLPPG--KAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQL 692 (1101)
Q Consensus 616 ~y~y~c~A~N~~G~~-~~s~~l~v~~~P~~P~--~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~ 692 (1101)
.|.|+|.|.|..|.. +....+.|..+|..|. ........+..+.|.|...+.+
T Consensus 354 ~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p------------------------ 409 (642)
T 1e07_A 354 VGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNP------------------------ 409 (642)
T ss_pred CeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccC------------------------
Confidence 999999999999875 3457788876665431 1122345677889998853211
Q ss_pred cCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCC
Q psy8139 693 LPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSE 772 (1101)
Q Consensus 693 ~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 772 (1101)
...+.|... |.++ .....+.|.++.+...+.|+|.|.|..|...
T Consensus 410 ----------~~~i~W~~~----g~~~----------------------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 453 (642)
T 1e07_A 410 ----------PAQYSWLID----GNIQ----------------------QHTQELFISNITEKNSGLYTCQANNSASGHS 453 (642)
T ss_pred ----------CCeEEEEEC----CEEc----------------------CCCceEEEccCChhhCeEEEEEEEcCCCCCc
Confidence 124667531 1100 1234688999999999999999999998744
Q ss_pred C
Q psy8139 773 P 773 (1101)
Q Consensus 773 ~ 773 (1101)
.
T Consensus 454 ~ 454 (642)
T 1e07_A 454 R 454 (642)
T ss_pred c
Confidence 3
No 12
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.94 E-value=4.3e-24 Score=263.75 Aligned_cols=376 Identities=16% Similarity=0.152 Sum_probs=259.9
Q ss_pred hhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCC-CcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEE
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGK-PQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGY 383 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~-p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y 383 (1101)
.+.|.|.++...|.|.|.|.+.|..|...+..+.+.+...|..|.. |... .......++|.|... +.+...+
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~---~~~~G~~~~l~C~~~----g~p~~~i 235 (642)
T 1e07_A 163 NRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNT---SYRSGENLNLSCHAA----SNPPAQY 235 (642)
T ss_pred CCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCc---ccccCCEEEEEEEcC----CCCCcEE
Confidence 4679999999999999999999888876566677777655443321 1111 123456788888773 2122222
Q ss_pred EEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeE
Q psy8139 384 LVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTT 463 (1101)
Q Consensus 384 ~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~ 463 (1101)
.|.+.+........|.|.+++..|.|.|+|.|.|..|....+ ..+.+.+... +.+|.+. .+....
T Consensus 236 ----------~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s---~~~~v~v~~~-~~~p~i~-~~~~~~ 300 (642)
T 1e07_A 236 ----------SWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRT---TVTTITVYAE-PPKPFIT-SNNSNP 300 (642)
T ss_pred ----------EEEECCeEcccCCceEEecccccCCeEEEEEEEeCCCceEEe---eeEEEEEEcc-CCCCEEE-cCCcee
Confidence 344444333455789999999999999999999988865332 3344444322 2334443 233444
Q ss_pred EccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE-EEEEEee
Q psy8139 464 ALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI-TKARLRL 542 (1101)
Q Consensus 464 v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~-~s~~l~V 542 (1101)
+..|+++.|.|.+.+.| +.+.|+++|..+....++.+...+ ..|.|.++...|+|.|+|.|.|..|... ....|.|
T Consensus 301 ~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 377 (642)
T 1e07_A 301 VEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDN--RTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNV 377 (642)
T ss_pred EecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCC--CEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEE
Confidence 56688899999999987 699999999988766666654443 3899999999999999999999998754 3578888
Q ss_pred ccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEE
Q psy8139 543 EAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAH 622 (1101)
Q Consensus 543 ~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~ 622 (1101)
..+|..... .+....+..|+.+.|.|.+.|.|.+.+.|+++|..+.. ...|.|.++...|.|.|+|.
T Consensus 378 ~~~p~~~~~--~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~-----------~~~L~i~~~~~~d~G~Y~C~ 444 (642)
T 1e07_A 378 LYGPDDPTI--SPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH-----------TQELFISNITEKNSGLYTCQ 444 (642)
T ss_pred EcCCCCCee--cCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCC-----------CceEEEccCChhhCeEEEEE
Confidence 876654221 11234678899999999999999999999999987753 34589999999999999999
Q ss_pred EEeCCCCceeE--EEEEEecCCCCCC---ccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCC
Q psy8139 623 GVNSLGEDVAS--FLVTVTDRPLPPG---KAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSP 697 (1101)
Q Consensus 623 A~N~~G~~~~s--~~l~v~~~P~~P~---~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~ 697 (1101)
|.|..|....+ ..+.+..++.+|. ........+..+.|.|....
T Consensus 445 a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~------------------------------- 493 (642)
T 1e07_A 445 ANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEA------------------------------- 493 (642)
T ss_pred EEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCC-------------------------------
Confidence 99999876654 4555555444442 11223346778888888531
Q ss_pred CCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 698 SLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 698 ~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
....+.|.... .++. .+ ...... .+...++|.++.+.+.+.|.|.|.|..|.
T Consensus 494 ----~~~~i~W~~~g----~~l~---------~~-~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 545 (642)
T 1e07_A 494 ----QNTTYLWWVNG----QSLP---------VS-PRLQLS---NGNRTLTLFNVTRNDARAYVCGIQNSVSA 545 (642)
T ss_pred ----CCcEEEEEECC----EeCC---------CC-CcEEEc---CCCcEEEEeecChhcCceEEEEeEcCCCC
Confidence 12356775321 1111 00 001111 23457899999999999999999999985
No 13
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.94 E-value=1.5e-25 Score=257.84 Aligned_cols=314 Identities=20% Similarity=0.221 Sum_probs=214.7
Q ss_pred hhhhhhhcc-cccCcceEEEeeecccccccccceeeeccCCCCCCCCCc-ccCCCCCCCCCeeEEEEeCCCCCCCcCeeE
Q psy8139 305 QAKKTADNQ-FENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQ-LLPDSPSLDRDVFTIRWEPPEYDGGSPVLG 382 (1101)
Q Consensus 305 ~~~l~i~~~-~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~-~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~ 382 (1101)
.+.|.|.+. ...|+|.|+|.|.|..|...+....+.+...+..+..+. .+ .......+.|.|.++. +.+...
T Consensus 61 ~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~---~v~~G~~~~l~C~~~~---~~~~~~ 134 (384)
T 3kld_A 61 DGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTV---SVRRGQGMVLLCGPPP---HSGELS 134 (384)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCE---EEEETCCEEECCCCCS---EESCEE
T ss_pred CCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCce---eEEcCCCeEEecCCCC---CCCCeE
Confidence 456777776 778999999999999888766655554433222211111 00 0112334455554331 111111
Q ss_pred EEEEEEe---cCCCceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEec-cCCCCCCee-ee
Q psy8139 383 YLVEHRR---TGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQ-RSPAAAPSF-IR 457 (1101)
Q Consensus 383 Y~v~~~~---~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~-~~~~~~P~~-~~ 457 (1101)
|...... ....... .....+.|.|.++++.|.|.|+|.|.|..|..........+.+... .....+|.+ ..
T Consensus 135 ~~W~~~~~~~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~ 210 (384)
T 3kld_A 135 YAWIFNEYPSYQDNRRF----VSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQ 210 (384)
T ss_dssp EEEEETTEECCCSSSEE----ECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEE
T ss_pred EEEEECCCCCEeeccEE----EEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeec
Confidence 1111100 0000001 1123467999999999999999999998875422111122222211 111123333 34
Q ss_pred cCceeEEccCCeEEEEEEEeccCCCeEEEEECC-EEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG-FEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT 536 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g-~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~ 536 (1101)
.|..+.+..|+++.|.|.+.|.|.|.+.|++++ ..+.... ... .....|.|.++...|+|.|+|.|.|..|....
T Consensus 211 ~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 286 (384)
T 3kld_A 211 FPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA--RRH--KSNGILEIPNFQQEDAGSYECVAENSRGKNVA 286 (384)
T ss_dssp CCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTC--EEC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccc--eec--CCCcEEEECCCChhhCEEEEEEEEcCCCeEEE
Confidence 466778899999999999999999999999954 3443321 111 22348999999999999999999999999988
Q ss_pred EEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCC
Q psy8139 537 KARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADR 616 (1101)
Q Consensus 537 s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~ 616 (1101)
...|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.|.+.|+++|.++....++.+. .++|.|.++...|.
T Consensus 287 ~~~l~v~~~P~~~~~~~---~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~----~~~L~i~~v~~~D~ 359 (384)
T 3kld_A 287 KGQLTFYAQPNWVQIIN---DIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE----QGTLNITIVNLSDA 359 (384)
T ss_dssp EEEEEEEEEEEEEECCC---CEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEE----TTEEEESSCCGGGC
T ss_pred EEEEEEecCCccccCCC---ceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEe----CCEEEEeecChhhC
Confidence 89999998887765443 457888999999999999999999999999999776666553 45899999999999
Q ss_pred eEEEEEEEeCCCCceeEEEEEEe
Q psy8139 617 GEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 617 y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
|.|+|.|.|..|....++.|.|.
T Consensus 360 G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 360 GMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCceEEeceEEEEe
Confidence 99999999999999999888875
No 14
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.93 E-value=3.2e-25 Score=257.25 Aligned_cols=317 Identities=19% Similarity=0.264 Sum_probs=223.1
Q ss_pred hhhhhhhcc-----cccCcceEEEeeecc-cccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCc
Q psy8139 305 QAKKTADNQ-----FENQAPLYVRLEEAI-TGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGS 378 (1101)
Q Consensus 305 ~~~l~i~~~-----~~~d~g~Y~c~a~n~-~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~ 378 (1101)
.+.|.|.++ ...|+|.|.|.+.+. .|...+..+.+.+..+|.....+..+. ......++|.|.... .
T Consensus 76 ~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~---~~~G~~v~l~C~~~~----~ 148 (403)
T 3laf_A 76 NGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESIT---AFMGDTVLLKCEVIG----D 148 (403)
T ss_dssp TSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEE---EETTSCEEECCCEEC----S
T ss_pred CCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEE---EEcCCeEEEEEEEcc----c
Confidence 455667666 677999999999754 343334446666655443322222210 122445556554421 1
Q ss_pred CeeEEEEEEEecCCCceE---EcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCC--CCC
Q psy8139 379 PVLGYLVEHRRTGSPYWV---RASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPA--AAP 453 (1101)
Q Consensus 379 ~i~~Y~v~~~~~~~~~w~---~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~--~~P 453 (1101)
+... +.|...+...-. ...........|.|.++++.|.|.|+|.|.|..|.... ..+.+.+...+. .++
T Consensus 149 p~~~--v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~----~~~~l~v~~~p~~~~~~ 222 (403)
T 3laf_A 149 PMPT--IHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTG----NEAEVRILSDPGLHRQL 222 (403)
T ss_dssp SCCE--EEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBC----CCEEEEEECCCCCCEEE
T ss_pred CCCe--EEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceec----cceeEEEecCCCcccCc
Confidence 1111 111111110000 00001123467999999999999999999998765322 234444433222 233
Q ss_pred eeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 454 SFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 454 ~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
.+...+.+..+..|++++|.|.+.+.|.+.+.|++++..+...........+. .|.|.++...|+|.|+|.|.|..|.
T Consensus 223 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~ 300 (403)
T 3laf_A 223 YFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDDDSGTYTCVVTYKNEN 300 (403)
T ss_dssp EEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTT--EEEECSCCGGGCEEEEEEEEETTEE
T ss_pred eEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCcc--EEEEeCCCHHHCEEEEEEEEcCCCc
Confidence 45667788889999999999999999999999999999886544333333333 8999999999999999999999999
Q ss_pred eEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCC
Q psy8139 534 SITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARR 613 (1101)
Q Consensus 534 ~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~ 613 (1101)
...+..|.|..+|.+...+. ...+..|..+.|.|.+.|.|.+.+.|+++|..+..+..+.+.. ...|.|.++..
T Consensus 301 ~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~---~~~L~i~~v~~ 374 (403)
T 3laf_A 301 ISASAELTVLVPPWFLNHPS---NLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVG---GSNLRILGVVK 374 (403)
T ss_dssp EEEEEEEEEEEEEEEEECCC---CEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEET---TTEEEESSCCG
T ss_pred eEEEEEEEEECCCcEeecCc---ceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEec---CccEEEecccc
Confidence 88899999998887765553 3467789999999999999999999999999987766655542 46799999999
Q ss_pred CCCeEEEEEEEeCCCCceeEEEEEEecCC
Q psy8139 614 ADRGEYQAHGVNSLGEDVASFLVTVTDRP 642 (1101)
Q Consensus 614 ~~~y~y~c~A~N~~G~~~~s~~l~v~~~P 642 (1101)
.|.|.|+|.|.|..|....+..|.|..+|
T Consensus 375 ~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 375 SDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred ccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 99999999999999999999999887654
No 15
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.93 E-value=1.9e-24 Score=274.78 Aligned_cols=389 Identities=17% Similarity=0.219 Sum_probs=273.3
Q ss_pred hhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEE
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYL 384 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~ 384 (1101)
.+.|.|.++...|+|.|.|.+.|..|.. +....+.+..+|.....|.... ......++|.|... +.+
T Consensus 305 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~---v~~G~~v~l~C~~~----g~p----- 371 (816)
T 3dmk_A 305 SGTLIIKDAVVEDSGKYLCVVNNSVGGE-SVETVLTVTAPLSAKIDPPTQT---VDFGRPAVFTCQYT----GNP----- 371 (816)
T ss_dssp TTEEEECSCCGGGCEEEEEEEECSSCEE-EEEEEEEECEEEEEEEESSEEE---CCTTSCEEEEEEEE----EEC-----
T ss_pred cceEEECCCCHhHCEEEEEEEEcCCCce-EEEEEEEEcCCCceeeCCCceE---ecCCCCEEEEEEEe----ccC-----
Confidence 4679999999999999999998887754 3334555544433222222211 12345567777543 111
Q ss_pred EEEEecCCCceEEcCccc-cccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeE
Q psy8139 385 VEHRRTGSPYWVRASPHM-VEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTT 463 (1101)
Q Consensus 385 v~~~~~~~~~w~~~~~~~-~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~ 463 (1101)
.....|.+.+... .....|.|.+++..|.|.|+|.|.|..|....+ ..+.+. ....+|.+...+.+..
T Consensus 372 -----~~~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-----~~l~v~-~~~~~p~i~~~~~~~~ 440 (816)
T 3dmk_A 372 -----IKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEAS-----AELKLG-GRFDPPVIRQAFQEET 440 (816)
T ss_dssp -----CCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEC-----CEEECC-CSSCCCEEEEECCCEE
T ss_pred -----CCEEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEE-----EEEEEc-cccCCCceEecCcceE
Confidence 1122355444322 234689999999999999999999988754322 333332 1246788888888889
Q ss_pred EccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEe----c-CCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEE
Q psy8139 464 ALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVT----D-NDISTLIIHQAALMDEGEIKCTATNRAGHSITKA 538 (1101)
Q Consensus 464 v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~----~-~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~ 538 (1101)
+..|+++.|.|.+.|.|.+.++|+++|..+.....+.... . ...+.|.|.++...|+|.|+|.|.|..|....++
T Consensus 441 v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 520 (816)
T 3dmk_A 441 MEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSA 520 (816)
T ss_dssp ECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEE
T ss_pred EcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEE
Confidence 9999999999999999999999999999987766554321 1 2235799999999999999999999999998899
Q ss_pred EEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCC-CCCCe
Q psy8139 539 RLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDAR-RADRG 617 (1101)
Q Consensus 539 ~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~-~~~~y 617 (1101)
.|.|..+|.+... ....+..|+.+.|.|.+.+.|.+.+.|++++..+.......+.. +++|.|.++. ..|.|
T Consensus 521 ~l~V~~~p~~~~~----~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~---~~~l~i~~v~~~~d~G 593 (816)
T 3dmk_A 521 KLNVYGLPYIRQM----EKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFP---NGTLIIENVERNSDQA 593 (816)
T ss_dssp EEEECSSCEECCC----CCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECT---TSEEEESSCCHHHHCE
T ss_pred EEEEecCCeeEcc----CCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEec---CCeEEEEecCccccCE
Confidence 9999988866433 23467889999999999999999999999999987666555442 4579999998 68999
Q ss_pred EEEEEEEeCCCCc-eeEEEEEEecCCCCCC--ccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccC
Q psy8139 618 EYQAHGVNSLGED-VASFLVTVTDRPLPPG--KAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLP 694 (1101)
Q Consensus 618 ~y~c~A~N~~G~~-~~s~~l~v~~~P~~P~--~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~ 694 (1101)
.|+|.|.|..|.. .....+.+..+|.... ........+..++|.|.....
T Consensus 594 ~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~--------------------------- 646 (816)
T 3dmk_A 594 TYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGG--------------------------- 646 (816)
T ss_dssp EEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCS---------------------------
T ss_pred EEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCC---------------------------
Confidence 9999999999964 3456677766553211 111234568899999986431
Q ss_pred CCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccC
Q psy8139 695 DSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFS 771 (1101)
Q Consensus 695 ~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 771 (1101)
+..+.+.|.... .++. ....+... ........++|.++.+...+.|+|.|.|..|..
T Consensus 647 ------~~~~~i~W~~~g----~~l~---------~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 703 (816)
T 3dmk_A 647 ------DLPLNIDWTLDG----QAIS---------EDLGITTS-RVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQ 703 (816)
T ss_dssp ------SSCCEEEEEETT----BCCC---------GGGTCEEE-EETTTEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred ------CCCCEEEEEECC----eEcC---------CCCCeeEE-EcCCCeeEEEEccCChhhCEEEEEEEEeCCccE
Confidence 112356786521 1110 00011110 111234678999999999999999999999974
No 16
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.93 E-value=9.9e-25 Score=251.10 Aligned_cols=314 Identities=22% Similarity=0.242 Sum_probs=222.4
Q ss_pred hhhhhhhcccc-cCcceEEEeeecccccccccceeeeccCCCCCCCCC-cccCCCCCCCCCeeEEEEeCCCCCCCcCeeE
Q psy8139 305 QAKKTADNQFE-NQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKP-QLLPDSPSLDRDVFTIRWEPPEYDGGSPVLG 382 (1101)
Q Consensus 305 ~~~l~i~~~~~-~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p-~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~ 382 (1101)
.+.|.|.++.. .|+|.|.|.+.|..|...+....+.+..+|..+..+ ..+ .......++|.|..+. +.+...
T Consensus 60 ~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~---~v~~G~~v~l~C~~~~---~~p~~~ 133 (382)
T 1cs6_A 60 AGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPV---KITEGWGVMFTCSPPP---HYPALS 133 (382)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCE---EEETTSCEEECCCCCS---EESCCE
T ss_pred CCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCce---EEecCCcEEEEeCCCC---CCCCcE
Confidence 45788999887 999999999999888766655555554433322211 110 0122445666665431 111112
Q ss_pred EEEEEEecCCCceE-EcCc--cccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEecc--CCCCCCeeee
Q psy8139 383 YLVEHRRTGSPYWV-RASP--HMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR--SPAAAPSFIR 457 (1101)
Q Consensus 383 Y~v~~~~~~~~~w~-~~~~--~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~--~~~~~P~~~~ 457 (1101)
+. |...+..... .... .......|.|.++++.|.|.|+|.|.|..|....+..+..+.+.+.. ....+|.+..
T Consensus 134 i~--W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~ 211 (382)
T 1cs6_A 134 YR--WLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKA 211 (382)
T ss_dssp EE--EEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEE
T ss_pred EE--EEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceec
Confidence 22 2111111000 0000 01233679999999999999999999988654332223334444332 1223455544
Q ss_pred -cCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE
Q psy8139 458 -ALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT 536 (1101)
Q Consensus 458 -~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~ 536 (1101)
.|....+..|+.++|.|.+.|.|.+.+.|++++..+... .......|.|.++...|+|.|+|.|.|..|....
T Consensus 212 ~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 285 (382)
T 1cs6_A 212 KFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK------WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTY 285 (382)
T ss_dssp CCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC------CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred cCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE------EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEE
Confidence 466788999999999999999999999999987654321 1123348999999999999999999999999888
Q ss_pred EEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCC
Q psy8139 537 KARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADR 616 (1101)
Q Consensus 537 s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~ 616 (1101)
...|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+.+.|+++|..+..+.++.+. .+.|.|.++...|.
T Consensus 286 ~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~----~~~L~i~~v~~~d~ 358 (382)
T 1cs6_A 286 QGRIIIHAQPDWLDVIT---DTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS----GGELRFSKLVLEDS 358 (382)
T ss_dssp EEEEEEEEEEEEEECCC---CEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE----TTEEEESSCCGGGC
T ss_pred EEEEEEecCCCcccCCC---ccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE----CCEEEECcCCcccC
Confidence 89999998888765443 457888999999999999999999999999999877666553 45899999999999
Q ss_pred eEEEEEEEeCCCCceeEEEEEEe
Q psy8139 617 GEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 617 y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
|.|+|.|.|..|....+..|.|.
T Consensus 359 G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 359 GMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCeEEEEEEEEEe
Confidence 99999999999999888888875
No 17
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.92 E-value=4.2e-23 Score=262.48 Aligned_cols=388 Identities=19% Similarity=0.207 Sum_probs=260.4
Q ss_pred hhhhhhhhcccccCc-ceEEEeeeccccccc--ccc-eeeeccCCCCCCCCCcccCC-----CCCCCCCeeEEEEeCCCC
Q psy8139 304 KQAKKTADNQFENQA-PLYVRLEEAITGLNV--GTD-LYCVIKKPPGPPGKPQLLPD-----SPSLDRDVFTIRWEPPEY 374 (1101)
Q Consensus 304 ~~~~l~i~~~~~~d~-g~Y~c~a~n~~G~~~--s~~-~~~~v~~~p~~P~~p~~l~~-----~~~~~~~sv~l~W~~p~~ 374 (1101)
..+.|.|.++..+|+ |.|.|.+.+..+... +.. ..+.+..+ .....|.+... ........++|.|...
T Consensus 197 ~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~-~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~-- 273 (816)
T 3dmk_A 197 PSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEP-ISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQ-- 273 (816)
T ss_dssp TTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECC-CSCCCCBCCGGGGEEEEEECTTSCEEECCCCB--
T ss_pred cCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCC-CCCCCCccccccCccceEEeCCCeEEEEEEee--
Confidence 356799999999999 999999975432211 111 23333322 22222222100 0012345666666653
Q ss_pred CCCcCeeEEEEEEEecCCCceEEc---CccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCC
Q psy8139 375 DGGSPVLGYLVEHRRTGSPYWVRA---SPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAA 451 (1101)
Q Consensus 375 ~g~~~i~~Y~v~~~~~~~~~w~~~---~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~ 451 (1101)
|.+...+.......+....... ........+|.|.+++..|+|.|+|.|.|..|... ..+.+.+. .
T Consensus 274 --g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~-----~~~~l~V~----~ 342 (816)
T 3dmk_A 274 --GYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGES-----VETVLTVT----A 342 (816)
T ss_dssp --CSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEE-----EEEEEEEC----E
T ss_pred --ecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceE-----EEEEEEEc----C
Confidence 1122222222111111000000 00111346899999999999999999999887542 22344443 4
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
+|.+...|....+..|+++.|.|.+.|.|.+.++|+++|..+... ...|.|.++...|+|.|+|.|.|..
T Consensus 343 ~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~ 412 (816)
T 3dmk_A 343 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS----------ESVLRIESVKKEDKGMYQCFVRNDR 412 (816)
T ss_dssp EEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEEECSS
T ss_pred CCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCC----------CCEEEEcCCCHHHCEEEEEEEECCC
Confidence 556667788888999999999999999999999999999887542 2379999999999999999999999
Q ss_pred CceEEEEEEeec---cCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEe-----ecce
Q psy8139 532 GHSITKARLRLE---APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITH-----TDRY 603 (1101)
Q Consensus 532 g~~~~s~~l~V~---~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-----~~~~ 603 (1101)
|....+..+.|. .+|.+...+ ....+..|..+.|.|.+.|.|.+.+.|+++|..+..+..+.... ....
T Consensus 413 g~~~~~~~l~v~~~~~~p~i~~~~---~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~ 489 (816)
T 3dmk_A 413 ESAEASAELKLGGRFDPPVIRQAF---QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVV 489 (816)
T ss_dssp CEEEECCEEECCCSSCCCEEEEEC---CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEE
T ss_pred CcEEEEEEEEEccccCCCceEecC---cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcE
Confidence 987777777774 355554332 23477889999999999999999999999999988766654321 1224
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcC
Q psy8139 604 LNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRP 683 (1101)
Q Consensus 604 ~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~ 683 (1101)
..|.|.++...|.|.|+|.|.|..|....+..+.|..+|............+..+.|.|.....
T Consensus 490 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~---------------- 553 (816)
T 3dmk_A 490 SYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGY---------------- 553 (816)
T ss_dssp EEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECS----------------
T ss_pred EEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCC----------------
Confidence 5799999999999999999999999988899999988773322223445678889999975321
Q ss_pred CCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCC-CCceEEEEE
Q psy8139 684 PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLE-PGWRYQFRI 762 (1101)
Q Consensus 684 ~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~-p~t~Y~~~V 762 (1101)
....+.|.... ..+ ........ ....++.|.++. ....+.|+|
T Consensus 554 ------------------p~~~i~W~k~~----~~l----------~~~~~~~~----~~~~~l~i~~v~~~~d~G~Y~C 597 (816)
T 3dmk_A 554 ------------------PIDSIVWERDN----RAL----------PINRKQKV----FPNGTLIIENVERNSDQATYTC 597 (816)
T ss_dssp ------------------SEEEEEEEETT----EES----------CCSTTEEE----CTTSEEEESSCCHHHHCEEEEE
T ss_pred ------------------CCCEEEEEECC----eEc----------ccCCceEE----ecCCeEEEEecCccccCEEEEE
Confidence 12356776421 101 00000111 234578899987 688899999
Q ss_pred EEEcCCcc
Q psy8139 763 TAENVVGF 770 (1101)
Q Consensus 763 ~A~n~~G~ 770 (1101)
.|.|..|.
T Consensus 598 ~a~n~~g~ 605 (816)
T 3dmk_A 598 VAKNQEGY 605 (816)
T ss_dssp EEEESSSC
T ss_pred EEEECCCc
Confidence 99999885
No 18
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.92 E-value=1.9e-22 Score=246.27 Aligned_cols=399 Identities=12% Similarity=0.051 Sum_probs=254.8
Q ss_pred hhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEE
Q psy8139 306 AKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLV 385 (1101)
Q Consensus 306 ~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v 385 (1101)
..|.|.++...|+|.|.|.+.|..|.. +..+.+.+..+|.....|..+. ......++|.|.....+ +...+
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~p~~~~~~~~~~---v~~G~~v~l~C~~~~~~---~~~~v-- 145 (585)
T 2ocw_A 75 FVVNIAQLSQDDSGRYKCGLGINSRGL-SFDVSLEVSQGPGLLNDTKVYT---VDLGRTVTINCPFKTEN---AQKRK-- 145 (585)
T ss_pred EEEEECCCCcccCEEEEEEcccCCCCc-eEEEEEEEecCccccCCCccEE---EEcCCCEEEEEEecCCC---CCccE--
Confidence 458999999999999999998776653 4447777777776554444321 12345566666553111 11111
Q ss_pred EEEecCCC-----------------ceEEc--CccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEec
Q psy8139 386 EHRRTGSP-----------------YWVRA--SPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQ 446 (1101)
Q Consensus 386 ~~~~~~~~-----------------~w~~~--~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~ 446 (1101)
.|...+.. ..... ........+|.|.+++..|.|.|+|.|.|..|... ..+.+.+.
T Consensus 146 ~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-----~~~~l~V~ 220 (585)
T 2ocw_A 146 SLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNK-----KNADLQVL 220 (585)
T ss_pred EEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCcccc-----ceEEEEEc
Confidence 11111110 00000 00000112799999999999999999999877543 23455443
Q ss_pred cCCCCCCeeeecCceeEEccCCeEEEEEEEeccCC---CeEEEE-ECCE---Eeec---------CCcEEEEec--CCee
Q psy8139 447 RSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPT---PKVSWY-KDGF---EIFS---------SRRQRIVTD--NDIS 508 (1101)
Q Consensus 447 ~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~---~~v~W~-~~g~---~~~~---------~~~~~~~~~--~~~~ 508 (1101)
. .+ |..+.+..|+.+.|.|.+ +.|. +.+.|+ ++|. .+.. ..++.+... .+..
T Consensus 221 ~---~~------p~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 290 (585)
T 2ocw_A 221 K---PE------PELVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSF 290 (585)
T ss_pred c---CC------CceeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEE
Confidence 2 12 344567899999999997 4444 678897 7773 1211 233333322 3334
Q ss_pred EEEEeecCCCCCEEEEEEEEeCCCceE----EEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCee----
Q psy8139 509 TLIIHQAALMDEGEIKCTATNRAGHSI----TKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTA---- 580 (1101)
Q Consensus 509 ~l~I~~l~~~d~g~Y~C~a~n~~g~~~----~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v---- 580 (1101)
.|.|.++...|+|.|+|.|.|..+... ..+.|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.+.+
T Consensus 291 ~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~---~~~~~~~G~~v~l~C~~~~~p~p~i~~w~ 367 (585)
T 2ocw_A 291 SVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSP---TVVKGVAGSSVAVLCPYNRKESKSIKYWC 367 (585)
T ss_pred EEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEecccccccCC---cceEEEeCCcEEEEEecCCCCCccEEEEE
Confidence 799999999999999999999533332 67789999888776554 3457889999999999999999877
Q ss_pred EEEE--CCe--ecCC---------CCceEEEee--cceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC-CCC
Q psy8139 581 RWLH--NGE--PLTS---------GGRYEITHT--DRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDR-PLP 644 (1101)
Q Consensus 581 ~W~~--~g~--~l~~---------~~~~~~~~~--~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~-P~~ 644 (1101)
.|++ +|. .+.. ..++.+... .+..+|.|.++...|.|.|+|.| |..|.......|.|... |..
T Consensus 368 ~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~ 446 (585)
T 2ocw_A 368 LWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNL 446 (585)
T ss_pred EEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCcccc
Confidence 7998 776 3321 234444332 22345999999999999999999 99998888888888754 322
Q ss_pred CCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEE
Q psy8139 645 PGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLV 724 (1101)
Q Consensus 645 P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V 724 (1101)
..........+.++.|+|.......| .....|.|... |.++.
T Consensus 447 ~~~~~~~v~~G~~v~L~C~~~~~~~~------------------------------~p~~~v~W~k~----g~~~~---- 488 (585)
T 2ocw_A 447 KVPGNVTAVLGETLKVPCHFPCKFSS------------------------------YEKYWCKWNNT----GCQAL---- 488 (585)
T ss_pred ccCCceeEecCCcEEEEEEecCCCCC------------------------------CccEEEEEeec----Cceee----
Confidence 22223445677889999986532222 22346778642 11110
Q ss_pred EEEeCCC--CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCC
Q psy8139 725 EHRRTGS--PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSE 772 (1101)
Q Consensus 725 ~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 772 (1101)
...... ..+.... .......++|.++...+...|.|.|.|..|.+.
T Consensus 489 -~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 536 (585)
T 2ocw_A 489 -PSQDEGPSKAFVNCD-ENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGE 536 (585)
T ss_pred -eccCCCCCcceEEec-CcccEEEEEECCCCcccCeEEEEEeEeCCCccE
Confidence 000000 0011111 113346889999999999999999999998644
No 19
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.92 E-value=3.6e-24 Score=247.62 Aligned_cols=318 Identities=17% Similarity=0.228 Sum_probs=222.3
Q ss_pred hhhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEE
Q psy8139 304 KQAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGY 383 (1101)
Q Consensus 304 ~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y 383 (1101)
..+.|.|.++...|+|.|.|.+.|..|...+..+.+.+...+.++..|.... ......++|.|..+. +.+...+
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~---~~~G~~v~l~C~~~~---~~p~~~v 133 (395)
T 1bih_A 60 DEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKT---PIEGRPFQLDCVLPN---AYPKPLI 133 (395)
T ss_dssp TSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEEC---CBTTEEEEECCCCCE---EESCCEE
T ss_pred CCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCccee---eeeCCcEEEEecCCC---CCCCCeE
Confidence 4567999999999999999999998887665555555443333333333221 234567788876421 1122222
Q ss_pred EEEEEecCCC-ceE----EcCccccccceEEEcCccCCccE---EEEEEEEecCCCCCCCCCCcceEEEeccCC------
Q psy8139 384 LVEHRRTGSP-YWV----RASPHMVEDTELMVSGLEPGWRY---QFRITAENVVGFSEPGPLSEPLTVTYQRSP------ 449 (1101)
Q Consensus 384 ~v~~~~~~~~-~w~----~~~~~~~~~~~l~i~~L~p~d~y---~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~------ 449 (1101)
.......+.. ... ........++.|.|.++++.|.| .|+|.|.|..|...... ....+......
T Consensus 134 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~--~~~~~~~~~~~~~~~~~ 211 (395)
T 1bih_A 134 TWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVL--VEYEIKGVTKDNSGYKG 211 (395)
T ss_dssp EEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEE--EEEEECCCBCCSSCCCC
T ss_pred EEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEe--eeEEecccccccccccC
Confidence 2222210000 000 00001123467999999999999 99999999888643210 00111111000
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEE--ecCCeeEEEEeecCCCCCEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIV--TDNDISTLIIHQAALMDEGEIKCTA 527 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~~~l~I~~l~~~d~g~Y~C~a 527 (1101)
..+|.+ .+.+..+..|+.+.|.|.+.|.|.+.+.|+++|..+.......+. .......|.|.++...|+|.|+|.|
T Consensus 212 ~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 289 (395)
T 1bih_A 212 EPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEV 289 (395)
T ss_dssp CCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEE
T ss_pred CcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEE
Confidence 112333 356778999999999999999999999999999988654322222 1223348999999999999999999
Q ss_pred EeCCCceEE-EEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEE
Q psy8139 528 TNRAGHSIT-KARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNL 606 (1101)
Q Consensus 528 ~n~~g~~~~-s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl 606 (1101)
.|..|.... ++.|.|..+|.+...+.. ...+..|+.+.|.|.+.|.|.+.+.|+++|..+..+ ++.+. .+.|
T Consensus 290 ~n~~g~~~~~~~~l~V~~~P~~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~----~~~L 362 (395)
T 1bih_A 290 DNGVGKPQKHSLKLTVVSAPKYEQKPEK--VIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVT----DSGL 362 (395)
T ss_dssp CCSSSSCEEEEEEEEEEEEEEEEECCCS--EEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEE----TTEE
T ss_pred EeCCCCceEEEEEEEEEcCCccccCCCc--ceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEE----CCEE
Confidence 999998766 889999998888765542 257889999999999999999999999999998754 44443 2389
Q ss_pred EEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 607 RISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 607 ~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
.|.++...|.|.|+|.|.|..|....+..|.|
T Consensus 363 ~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 363 VIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 99999999999999999999999888888776
No 20
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.92 E-value=1.3e-23 Score=243.67 Aligned_cols=321 Identities=21% Similarity=0.261 Sum_probs=222.5
Q ss_pred hhhhhhh----cccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCe
Q psy8139 305 QAKKTAD----NQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 380 (1101)
Q Consensus 305 ~~~l~i~----~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i 380 (1101)
.+.|.|. ++...|+|.|.|.+.|..|...+..+.+.+..+|..|..+... ........++|.|..+. +.+.
T Consensus 72 ~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~--~~v~~G~~v~l~C~~~~---~~p~ 146 (404)
T 3p3y_A 72 SGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP--VVVQEGAPLTLQCNPPP---GLPS 146 (404)
T ss_dssp SCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCC--EEEETTSCEEECCCCCC---CSSC
T ss_pred CceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCC--eEEccCCcEEEEeCCCC---CCCC
Confidence 3445553 8888999999999999888876666777777766554332110 00123455677776531 1122
Q ss_pred eEEEEEEEecCCCceEEc-CccccccceEEEcCccCCc-cEEEEEEEEecCCCCCCCCCCcceEEEeccC-CCCCCeeee
Q psy8139 381 LGYLVEHRRTGSPYWVRA-SPHMVEDTELMVSGLEPGW-RYQFRITAENVVGFSEPGPLSEPLTVTYQRS-PAAAPSFIR 457 (1101)
Q Consensus 381 ~~Y~v~~~~~~~~~w~~~-~~~~~~~~~l~i~~L~p~d-~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~-~~~~P~~~~ 457 (1101)
.. +.|...+....... ......++.|.|.++...| .|.|+|.|.|..|..........+.+..... ...+|.+..
T Consensus 147 ~~--v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~ 224 (404)
T 3p3y_A 147 PV--IFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMY 224 (404)
T ss_dssp CE--EEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSS
T ss_pred Ce--EEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCcccc
Confidence 22 22221111000000 0011234679999999999 5999999999887643322222333322111 123344433
Q ss_pred c---CceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCce
Q psy8139 458 A---LHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHS 534 (1101)
Q Consensus 458 ~---p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~ 534 (1101)
. +....+..|+++.|.|.+.|.|.+.+.|+++|..+..... ..... ...|.|.++...|+|.|+|.|.|..|..
T Consensus 225 ~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 301 (404)
T 3p3y_A 225 PQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KFENF--NKALRITNVSEEDSGEYFCLASNKMGSI 301 (404)
T ss_dssp SCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EEEGG--GTEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred ccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcc-ccccc--CceEEEccCCHhHCEEEEEEEEeCCCcE
Confidence 2 2456789999999999999999999999999987765443 22222 2389999999999999999999999998
Q ss_pred EEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCc-eEEEeecceEEEEEccCCC
Q psy8139 535 ITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGR-YEITHTDRYLNLRISDARR 613 (1101)
Q Consensus 535 ~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~-~~~~~~~~~~sl~i~~l~~ 613 (1101)
.....|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+.+.|+++|..+..... ...... ..+|.|.++..
T Consensus 302 ~~~~~l~V~~~p~~~~~~~---~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~--~~~L~i~~v~~ 376 (404)
T 3p3y_A 302 RHTISVRVKAAPYWLDEPK---NLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVA--GDTIIFRDTQI 376 (404)
T ss_dssp EEEEEEEEEEEEEEEECCC---CEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEE--TTEEEESSCCS
T ss_pred EEEEEEEEeCCCeeeccCC---cceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEec--CCEEEEeecCH
Confidence 8889999998887765543 45788899999999999999999999999998865431 111111 35899999999
Q ss_pred CCCeEEEEEEEeCCCCceeEEEEEEec
Q psy8139 614 ADRGEYQAHGVNSLGEDVASFLVTVTD 640 (1101)
Q Consensus 614 ~~~y~y~c~A~N~~G~~~~s~~l~v~~ 640 (1101)
.|.|.|+|.|.|..|....+..|.|.+
T Consensus 377 ~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 377 SSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp SCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred HHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999998888888764
No 21
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.92 E-value=1.2e-22 Score=222.97 Aligned_cols=223 Identities=27% Similarity=0.436 Sum_probs=191.8
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecC-ceeEEccCCeEEEEEEEeccCCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRAL-HDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p-~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
...|.|.+++..|.|.|+|.|.|..|... ..+.+.+. .+|.+...+ ....+..|+.+.|.|.+.|.|.+.
T Consensus 60 ~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~-----~~~~l~V~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~ 130 (284)
T 2rik_A 60 TATLTVLKVTKGDAGQYTCYASNVAGKDS-----CSAQLGVQ----EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIK 130 (284)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEE-----EEEEEEEE----CCCEEEECCCSEEEEETTCCEEEEEEEESSSCCE
T ss_pred EEEEEEecCCcccCEEEEEEEEECCceEE-----EEEEEEcc----CCCcccccCCCceEecCCceEEEEEEEeeeCCCE
Confidence 46899999999999999999999877532 23444443 456665543 455688999999999999999999
Q ss_pred EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeC
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMG 563 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g 563 (1101)
+.|++++..+.....+..........|.|.++...|+|.|+|.|.|..|.......|.|..+|.+...+. ...+..|
T Consensus 131 v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~---~~~~~~g 207 (284)
T 2rik_A 131 VLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPH---PVETLKG 207 (284)
T ss_dssp EEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCC---CEEECTT
T ss_pred EEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCC---cceecCC
Confidence 9999999999887777776667778999999999999999999999999988899999999988765543 4577889
Q ss_pred CEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy8139 564 EIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 564 ~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
..+.|.|.+.|.|.+.+.|++++..+..+..+.+...+....|.|.++...|.|.|+|.|.|..|.......|.|.
T Consensus 208 ~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 208 ADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp CCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 9999999999999999999999999988888888777777899999999999999999999999998888888775
No 22
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.91 E-value=9.2e-24 Score=243.53 Aligned_cols=311 Identities=17% Similarity=0.225 Sum_probs=214.6
Q ss_pred hhhhhhhhcccccC------cceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCC
Q psy8139 304 KQAKKTADNQFENQ------APLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGG 377 (1101)
Q Consensus 304 ~~~~l~i~~~~~~d------~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~ 377 (1101)
..+.|.|.++...| +|.|+|.|.|..|...+..+.+.+..+|..+..+.... ......++|.|..+...+.
T Consensus 57 ~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~---v~~G~~v~l~C~~~~~~~~ 133 (388)
T 2v5m_A 57 SDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEH---VIRGNSAVIKCLIPSFVAD 133 (388)
T ss_dssp STTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEE---EETTSCEEECCBCCTTTTT
T ss_pred CCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCcccee---eecCCcEEEEEECcCCCCC
Confidence 45679999999887 99999999999887666667776666555443333211 2234567777766522111
Q ss_pred cCeeEEEEEEEecCCCceE-----EcCccccccceEEEcCccCCcc-EEEEEEEEecCCCCC-CCCCCcceEEEeccCCC
Q psy8139 378 SPVLGYLVEHRRTGSPYWV-----RASPHMVEDTELMVSGLEPGWR-YQFRITAENVVGFSE-PGPLSEPLTVTYQRSPA 450 (1101)
Q Consensus 378 ~~i~~Y~v~~~~~~~~~w~-----~~~~~~~~~~~l~i~~L~p~d~-y~y~c~A~n~~G~~~-~s~~s~~vtv~~~~~~~ 450 (1101)
+. ..+.|...+..... ........+.+|.|.++++.|. |.|+|.|.|..+... .+.....+.+..... .
T Consensus 134 -~~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~-~ 209 (388)
T 2v5m_A 134 -FV--EVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIS-S 209 (388)
T ss_dssp -TE--EEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCS-C
T ss_pred -Cc--ceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCc-C
Confidence 11 12222222111000 0000112346899999999999 999999999865322 121122344432110 0
Q ss_pred CCCeee-ecCceeEEccCCeEEEEEEEeccCCCeEEEEECCE------EeecCCcEEEEecCCeeEEEEeecCCCCCEEE
Q psy8139 451 AAPSFI-RALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGF------EIFSSRRQRIVTDNDISTLIIHQAALMDEGEI 523 (1101)
Q Consensus 451 ~~P~~~-~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~------~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y 523 (1101)
.+|.+. .......+..|+.++|.|.+.|.|.+.+.|++++. .+....+... .+ ..|.|.++...|+|.|
T Consensus 210 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~--~~--~~L~i~~v~~~d~G~Y 285 (388)
T 2v5m_A 210 SAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ--VS--GTLIIKDAVVEDSGKY 285 (388)
T ss_dssp EEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE--ET--TEEEESSCCGGGCEEE
T ss_pred CCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec--cc--CEEEECcCCHHHCeEE
Confidence 112111 11233567889999999999999999999999642 2222223322 22 2899999999999999
Q ss_pred EEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecce
Q psy8139 524 KCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRY 603 (1101)
Q Consensus 524 ~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 603 (1101)
+|.|.|..|.....+.|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+.+.|+++|..+..+ .
T Consensus 286 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~---~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~----------~ 352 (388)
T 2v5m_A 286 LCVVNNSVGGESVETVLTVTAPLSAKIDPP---TQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS----------E 352 (388)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEEEEESS---EEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC----------S
T ss_pred EEEEecCCCceeEEEEEEEeCCCccccCCC---cEEecCCCCEEEEEEeccccCCeEEEEECCEECccC----------C
Confidence 999999999988888999998887655443 457888999999999999999999999999887643 4
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 604 LNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 604 ~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
..|.|.++...|.|.|+|.|.|..|....++.|.|
T Consensus 353 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 353 SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 57999999999999999999999999888888775
No 23
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.91 E-value=4.5e-24 Score=254.26 Aligned_cols=298 Identities=13% Similarity=0.083 Sum_probs=194.1
Q ss_pred hhhhhhcccccCcceEEEeeecccccccccceeeeccCCC-CCCCCCcc--------cCCCCCCCCCeeEEEEeCCCCCC
Q psy8139 306 AKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPP-GPPGKPQL--------LPDSPSLDRDVFTIRWEPPEYDG 376 (1101)
Q Consensus 306 ~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p-~~P~~p~~--------l~~~~~~~~~sv~l~W~~p~~~g 376 (1101)
..|.|.++...|+|.|+|.+.|..|.... .+.+.+...+ ..|..|.. |.|. ..+....+++|...
T Consensus 103 ~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~-~~~v~v~~~~~~~~~~p~~~~~~~~~~L~C~-a~G~P~P~i~W~~~---- 176 (527)
T 3qs9_E 103 VSMVILKMTETQAGEYLLFIQSEATNYTI-LFTVSIRNTLLYTLRRPYFRKMENQDALVCI-SESVPEPIVEWVLC---- 176 (527)
T ss_dssp EEEEESSCCSSSCSEEEEEEEC--CEEEE-EEEEEEC-----CEEEEEEEECSSSSCEEEE-EEESSCCEEEEEEC----
T ss_pred EEEEECcCChhhCeeEEEEEEeccccEEE-EEEEEECCceeeccCCCcEEecCCceEEEEE-EceecCCeEEEEEC----
Confidence 34999999999999999999887664321 2333332111 11122222 2222 22222333333321
Q ss_pred CcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeee
Q psy8139 377 GSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFI 456 (1101)
Q Consensus 377 ~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~ 456 (1101)
+.++..+. .............+.+.|.|.|+|.|.|..|.... ..+++.+. .+|.+
T Consensus 177 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~----~~~~l~V~----~~p~~- 232 (527)
T 3qs9_E 177 DSQGESCK---------------EESPAVVKKEEKVLHELFGTDIRCCARNELGRECT----RLFTIDLN----QTPQT- 232 (527)
T ss_dssp ----------------------------CEEECCSEECCCCSSCEEEEEECSSCEEEE----ECEEEESS----SCCCC-
T ss_pred CCCCcccc---------------ccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccc----eEEEEEEe----ccCcc-
Confidence 00110000 00000112223446689999999999999886532 23455544 23333
Q ss_pred ecCceeEEccCCeEEEEEEEe-ccCCCeEEEEECCEEeecCCcEEEEe--c----CCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 457 RALHDTTALEDEKVEFTVQVE-GIPTPKVSWYKDGFEIFSSRRQRIVT--D----NDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 457 ~~p~~~~v~~g~~v~L~C~~~-g~p~~~v~W~~~g~~~~~~~~~~~~~--~----~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
.|.+..+..|+++.|.|.+. |.|.+.++|++++..+.....+.... . ....+|.|.++...|+|.|+|.|.|
T Consensus 233 -~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N 311 (527)
T 3qs9_E 233 -TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSK 311 (527)
T ss_dssp -SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETT
T ss_pred -CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEe
Confidence 45678899999999999996 99999999999998765543222111 1 1124699999999999999999998
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEc
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRIS 609 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~ 609 (1101)
. ...++.|.|..+|.+...+.. ....+..|+.+.|.|.+.|.|.|.+.|+++|..+.....+. ....+|.|.
T Consensus 312 ~---~~~~~~L~V~~~p~i~~~~~~-~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~I~ 383 (527)
T 3qs9_E 312 H---PSQSALVTIVEKGFINATNSS-EDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKF 383 (527)
T ss_dssp E---EEEEEEEEEC--CEEECCCSC-CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEE
T ss_pred C---CCceEEEEEEccCccccccCc-ccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc----cCCcEEEEe
Confidence 7 566788899888876554432 23456789999999999999999999999999886544321 135679999
Q ss_pred cCCCCCCeEEEEEEEeCCCCceeEEEEEEecCC
Q psy8139 610 DARRADRGEYQAHGVNSLGEDVASFLVTVTDRP 642 (1101)
Q Consensus 610 ~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P 642 (1101)
++...|.|.|+|.|.|..|....++.|.|..+|
T Consensus 384 ~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P 416 (527)
T 3qs9_E 384 CNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKP 416 (527)
T ss_dssp CCCTTCCSCEEEEEEETTEEEEEEEEEC--CCC
T ss_pred cCCcccCEEEEEEEEeCCCcEEEEEEEEEecCC
Confidence 999999999999999999988888888887555
No 24
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.91 E-value=2.6e-22 Score=222.55 Aligned_cols=260 Identities=16% Similarity=0.215 Sum_probs=186.2
Q ss_pred eecCceeEEccCCeEEEEEEEecc-------CCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGI-------PTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~-------p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
...|.+..+..|++++|.|.+.+. |.+.|.|.++|..+... ++.+. ++..+.|+|.++... .|.|+|.|.
T Consensus 8 ~i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~-~g~Y~C~a~ 84 (303)
T 1i1r_A 8 YISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASL-NIQLTCNIL 84 (303)
T ss_dssp EEESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCS-EEEEEEEEE
T ss_pred eEccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCC-ceEEEEecc
Confidence 346778889999999999999864 78899999999988654 34433 344668999999988 499999998
Q ss_pred eCCCceE---EEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEe------
Q psy8139 529 NRAGHSI---TKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITH------ 599 (1101)
Q Consensus 529 n~~g~~~---~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~------ 599 (1101)
+. |... ....+.+..+| +.+..+.|...+.....++|........ ...|.+..
T Consensus 85 ~~-g~~~~~~~~~~l~v~~~P----------------~~P~~l~~~~~~~~~v~l~W~~~~~~~~-~~~Y~v~~~~~~~~ 146 (303)
T 1i1r_A 85 TF-GQLEQNVYGITIISGLPP----------------EKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHK 146 (303)
T ss_dssp ET-TTEEEEEEEEEEEEECCC----------------CCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEE
T ss_pred cC-CCcceEEEEEEEeccCCC----------------CCCeeeEEEECCCCcEEEEccCCCCCCC-CcCEEEEEEecCCC
Confidence 84 4332 23445555554 3345577888777788899986432211 12333322
Q ss_pred -------ecceEEEEEccC-CCCCCeEEEEEEEeCCCCceeE-EEEEEe--cCCCCCCccEEEEe--cCCeEEEEeecCC
Q psy8139 600 -------TDRYLNLRISDA-RRADRGEYQAHGVNSLGEDVAS-FLVTVT--DRPLPPGKAKVVMT--LGKSVTLSWSEPE 666 (1101)
Q Consensus 600 -------~~~~~sl~i~~l-~~~~~y~y~c~A~N~~G~~~~s-~~l~v~--~~P~~P~~~~~~~~--~~~sv~lsW~~p~ 666 (1101)
.+...++.|.+| .+...|.|+|.|.|..|.+.++ ..+... .+|.||.++.+... +.+++.|+|+
T Consensus 147 ~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~--- 223 (303)
T 1i1r_A 147 FADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWT--- 223 (303)
T ss_dssp CCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEE---
T ss_pred CccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecCCCCEEEEEEC---
Confidence 122467899999 8999999999999999986532 222111 35777776665432 3345555555
Q ss_pred CCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeeccc--ccCc
Q psy8139 667 DDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPH--MVED 744 (1101)
Q Consensus 667 ~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~--~~~~ 744 (1101)
+|... ++++.+|.|+|+..++..|..+... ....
T Consensus 224 -------------------------------------------~p~~~-~~~i~~Y~v~y~~~~~~~w~~~~~~~~~~~~ 259 (303)
T 1i1r_A 224 -------------------------------------------NPSIK-SVIILKYNIQYRTKDASTWSQIPPEDTASTR 259 (303)
T ss_dssp -------------------------------------------CCGGG-GTSCEEEEEEEEETTCSSCEECCGGGGCSCC
T ss_pred -------------------------------------------CCCCC-CcccEEEEEEEEeCCCCCceEEccccCCCce
Confidence 44332 3468999999999888889876431 3567
Q ss_pred cEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 745 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 745 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
++++|.+|.|++.|.|+|+|.|..|.|++|+++..++..
T Consensus 260 ~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~ 298 (303)
T 1i1r_A 260 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGI 298 (303)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCcccee
Confidence 899999999999999999999999999999999877765
No 25
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=6e-22 Score=238.06 Aligned_cols=347 Identities=12% Similarity=0.112 Sum_probs=209.9
Q ss_pred hhhhhhhcccccCcceEEEeeecccccc--cccceeeeccCCCCCCCCCcccCCC-CCCCCCeeEEEEeCCCCCCCcCee
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLN--VGTDLYCVIKKPPGPPGKPQLLPDS-PSLDRDVFTIRWEPPEYDGGSPVL 381 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~--~s~~~~~~v~~~p~~P~~p~~l~~~-~~~~~~sv~l~W~~p~~~g~~~i~ 381 (1101)
.+.|.|.++..+|+|.|+|.+.|..|.. .+....+.|...+..|+........ .......++|.|.... . +..
T Consensus 69 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g---~-~p~ 144 (523)
T 2rcj_C 69 SASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISD---F-YPG 144 (523)
T ss_pred EEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEecc---c-cCC
Confidence 3469999999999999999998876532 2334555554332222111110000 0112345666665541 1 110
Q ss_pred EEEEEEEecCCCc---eEEc------CccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCC
Q psy8139 382 GYLVEHRRTGSPY---WVRA------SPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAA 452 (1101)
Q Consensus 382 ~Y~v~~~~~~~~~---w~~~------~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~ 452 (1101)
...+.|...+... .... .........|.|.++...|.|.|+|.|.|..|.... .+.+.+...+..+
T Consensus 145 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~-----~~~~~~~~~~~~~ 219 (523)
T 2rcj_C 145 AVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK-----TVAPTECSASTKG 219 (523)
T ss_pred ceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccccc-----ceeeeecCCCCcC
Confidence 1122222211100 0000 000001136899999999999999999998775432 1222222233456
Q ss_pred CeeeecCceeEEccCCeEEEEEEEecc-CCC-eEEEEECCEEeecCCcEEEEecCC----eeEEEEeecCCCCCEEEEEE
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVEGI-PTP-KVSWYKDGFEIFSSRRQRIVTDND----ISTLIIHQAALMDEGEIKCT 526 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~~g~~~~~~~~~~~~~~~~----~~~l~I~~l~~~d~g~Y~C~ 526 (1101)
|.+...+....+..|+.+.|.|.+.|. |.| .|+|+++|..+...........++ .+.|.|.++...| |.|+|.
T Consensus 220 P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~ 298 (523)
T 2rcj_C 220 PSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICN 298 (523)
T ss_pred CEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEE
Confidence 666544444567899999999999886 877 899999997653211111111112 3489999999999 999999
Q ss_pred EEeCCCceEEEEEEeeccCCccc-cCCCCCCCeEEeeCCEEEEEEEEeecCC----CeeEEEECCeecCCCCceEEE-e-
Q psy8139 527 ATNRAGHSITKARLRLEAPPTIR-LPKQYEDGLLFEMGEIIKLKVSMAGMPP----PTARWLHNGEPLTSGGRYEIT-H- 599 (1101)
Q Consensus 527 a~n~~g~~~~s~~l~V~~~p~~~-~~~~~~~~~~v~~g~~~~l~c~~~g~p~----~~v~W~~~g~~l~~~~~~~~~-~- 599 (1101)
|.|..|.......|.|...|.+. .++... ..+..|+.+.|.|.+.|.++ +.+.|+++|..+......... .
T Consensus 299 a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~--~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~ 376 (523)
T 2rcj_C 299 VNHKPSNTKVDKRVEPLSLPSVFLFPPKPK--DTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQY 376 (523)
T ss_pred EEeCCCCcceEEecCCCcCceEEecCCCch--hhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecC
Confidence 99999987777777776656542 222211 12677999999999998653 599999999988654322111 1
Q ss_pred ec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEe-cCCCCCCccEE-----EEecCCeEEEEeec
Q psy8139 600 TD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVT-DRPLPPGKAKV-----VMTLGKSVTLSWSE 664 (1101)
Q Consensus 600 ~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~-~~P~~P~~~~~-----~~~~~~sv~lsW~~ 664 (1101)
.+ ..+.|.|.++...|.|.|+|.|.|..|.......+.+. ....+|. +.+ ..+.+..++|.|..
T Consensus 377 ~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~-v~~~~~~~~~~~~~~~~l~C~~ 449 (523)
T 2rcj_C 377 NSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQ-VYTLPPSREEMTKNQVSLTCLV 449 (523)
T ss_pred CCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCE-EEEeCCChHHccCCceEEEEEE
Confidence 11 13468899999999999999999988876555445431 1222231 111 11223448888885
No 26
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.90 E-value=5e-21 Score=218.80 Aligned_cols=349 Identities=15% Similarity=0.101 Sum_probs=217.8
Q ss_pred CCCCCcccCCCCCCCCC-eeEEEEeCCCCCCCcCeeEEEEEEEecCCCc---eEEcCccccccceEEEcCccCCccEEEE
Q psy8139 347 PPGKPQLLPDSPSLDRD-VFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY---WVRASPHMVEDTELMVSGLEPGWRYQFR 422 (1101)
Q Consensus 347 ~P~~p~~l~~~~~~~~~-sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~---w~~~~~~~~~~~~l~i~~L~p~d~y~y~ 422 (1101)
||++|..+.+. ..+.+ ++.|+|.+|. +..+.+|.|++...++.. |... ......+++|.+|.|++.|.|+
T Consensus 1 Pp~~P~~l~~~-~~~~~~sv~l~W~~~~---~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~ 74 (368)
T 1fnf_A 1 PLSPPTNLHLE-ANPDTGVLTVSWERST---TPDITGYRITTTPTNGQQGNSLEEV--VHADQSSCTFDNLSPGLEYNVS 74 (368)
T ss_dssp CCCCCEEEEEE-ECSSSSCEEEEEECCS---CSSCCEEEEEEEETTTCSSCCEEEE--ECTTCCEEECCCCCTTSCEEEE
T ss_pred CCCCCcceEEE-ecCCCcEEEEEEeCCC---CCCceEEEEEEEECCCCCCceeEEE--ecCCcCEEEECCCCCCCEEEEE
Confidence 34555555544 55555 6999999984 347999999998765532 3322 2235578999999999999999
Q ss_pred EEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEc--cCCeEEEEEEEeccCCC---eEEEEECCEEeecCC
Q psy8139 423 ITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTAL--EDEKVEFTVQVEGIPTP---KVSWYKDGFEIFSSR 497 (1101)
Q Consensus 423 c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~--~g~~v~L~C~~~g~p~~---~v~W~~~g~~~~~~~ 497 (1101)
|.|.|..|.+.+. ...+...++ .|.++.+. ....+.|.+........ .|.|...+. ...
T Consensus 75 V~a~~~~g~s~~~------~~~~~~~~~-------~p~~l~~~~~~~~si~l~W~~p~~~~~~~Y~v~~~~~~~---~~~ 138 (368)
T 1fnf_A 75 VYTVKDDKESVPI------SDTIIPAVP-------PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKN---EED 138 (368)
T ss_dssp EEEEETTEECCCE------EEEECCCCC-------CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTC---TTC
T ss_pred EEEEcCCCccCce------eeeecCCCc-------CCceeEEEEcCCCeEEEEeeCCCCCCCcEEEEEEEECCC---CCc
Confidence 9999998876542 222222211 23444443 34456666655422111 344543221 111
Q ss_pred cEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEe--eCCEEEEEEEEeec
Q psy8139 498 RQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFE--MGEIIKLKVSMAGM 575 (1101)
Q Consensus 498 ~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~--~g~~~~l~c~~~g~ 575 (1101)
...+........+.+.+|.++..|.|.+.|.|..|.+.... .....+|. .+..+.+. ....+.|.+.....
T Consensus 139 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~-~~~~~~~~------~P~~l~~~~~~~~sv~l~W~~p~~ 211 (368)
T 1fnf_A 139 VAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR-GRQKTGLD------SPTGIDFSDITANSFTVHWIAPRA 211 (368)
T ss_dssp CEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEECCCC------CCEEEEEESCCSSEEEEEEECCSS
T ss_pred cEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeE-eeecCCCC------CCCccEEEEccCCEEEEEEeCCCC
Confidence 22333344556899999999999999999999988654322 12222211 11111221 12233333332211
Q ss_pred CC--CeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEe
Q psy8139 576 PP--PTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMT 653 (1101)
Q Consensus 576 p~--~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~ 653 (1101)
+. -.|.|...+. .+.............+.+.+|.++..|.|++.|.|..|.+..+. .....+|.+|.++.+...
T Consensus 212 ~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~-~~~~t~p~~P~~l~~~~~ 287 (368)
T 1fnf_A 212 TITGYRIRHHPEHF---SGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI-GQQSTVSDVPRDLEVVAA 287 (368)
T ss_dssp CCSEEEEEEECSCC---SSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE-EEEECCCCSCEEEEEEEE
T ss_pred CcCEEEEEEecCCC---CCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCccc-ccccCCCCCCCeeEEEec
Confidence 10 1222222111 01112233344567899999999999999999999998766543 446678899989888888
Q ss_pred cCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCC
Q psy8139 654 LGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY 733 (1101)
Q Consensus 654 ~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~ 733 (1101)
+.+++.|+|++|.. ++.+|.|.|...++..
T Consensus 288 ~~~sv~l~W~~p~~--------------------------------------------------~i~~Y~v~~~~~~~~~ 317 (368)
T 1fnf_A 288 TPTSLLISWDAPAV--------------------------------------------------TVRYYRITYGETGGNS 317 (368)
T ss_dssp ETTEEEEEEECCSS--------------------------------------------------CCSEEEEEEEETTCCS
T ss_pred CCCEEEEEeeCCCC--------------------------------------------------ccceEEEEEEECCCCC
Confidence 88888888886531 3677888877765533
Q ss_pred ceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCC
Q psy8139 734 WVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSE 778 (1101)
Q Consensus 734 ~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~ 778 (1101)
+..........+.+++.+|.|++.|.|+|.|.|..|.|++|....
T Consensus 318 ~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~~~~ 362 (368)
T 1fnf_A 318 PVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPI 362 (368)
T ss_dssp CCEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBCCCE
T ss_pred ccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccCcee
Confidence 222222235778999999999999999999999999998875443
No 27
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.90 E-value=1e-23 Score=244.39 Aligned_cols=304 Identities=12% Similarity=0.077 Sum_probs=186.4
Q ss_pred hhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCC-CCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEE
Q psy8139 306 AKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGP-PGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYL 384 (1101)
Q Consensus 306 ~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~-P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~ 384 (1101)
..|.|.++...|+|.|+|.|.|..|... ..+.+.|..+|.. |..|..+ .....++|.|... |.|..
T Consensus 103 ~sL~I~~v~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~~p~~~~~~p~~~-----~~~~~~~L~C~a~----G~P~P--- 169 (423)
T 3qs7_E 103 VSMVILKMTETQAGEYLLFIQSEATNYT-ILFTVSIRNTLLYTLRRPYFR-----KMENQDALVCISE----SVPEP--- 169 (423)
T ss_dssp EEEEESSCCSSSCSEEEEEEEC--CEEE-EEEEEEEC-----CEEEEEEE-----ECSSSSCEEEEEE----ESSCC---
T ss_pred EEEEEeecCcccCEEEEEEEEcCCCcEE-EEEEEEEecCccccccCCcEe-----ccCCceEEEEEEe----eecCC---
Confidence 4589999999999999999998877643 2355555533322 1222221 0122233344332 11111
Q ss_pred EEEEecCCCceEEcCccc------cccceEEE-cCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeee
Q psy8139 385 VEHRRTGSPYWVRASPHM------VEDTELMV-SGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR 457 (1101)
Q Consensus 385 v~~~~~~~~~w~~~~~~~------~~~~~l~i-~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~ 457 (1101)
...|.+.+... ........ .-+...|.|.|+|.|.|..|.... ..+.+.+... |.+
T Consensus 170 -------~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~----~~~~l~V~~~----p~~-- 232 (423)
T 3qs7_E 170 -------IVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECT----RLFTIDLNQT----PQT-- 232 (423)
T ss_dssp -------EEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEE----ECEEEESSSC----CCS--
T ss_pred -------eEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcce----eeEEEEEecC----Ccc--
Confidence 11122211100 00000000 112578999999999999886432 2355555432 222
Q ss_pred cCceeEEccCCeEEEEEEEec-cCCCeEEEEECCEEeecCCcEEE--Eec----CCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 458 ALHDTTALEDEKVEFTVQVEG-IPTPKVSWYKDGFEIFSSRRQRI--VTD----NDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g-~p~~~v~W~~~g~~~~~~~~~~~--~~~----~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+.+..+.+|+++.|.|.+.| .|.+.++|+++|..+.....+.. ... .....|.|.++...|+|.|+|.|.|.
T Consensus 233 ~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 344778899999999999998 77799999999987654322211 100 11237999999999999999999998
Q ss_pred CCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEcc
Q psy8139 531 AGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISD 610 (1101)
Q Consensus 531 ~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~ 610 (1101)
...++.|.|..+|.+...+.. ..+.+..|+.+.|.|.+.|.|.|.+.|+++|..+..+.... .....+....
T Consensus 313 ---~~~~~~L~V~~~p~i~~~~~~-~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~~~~~~ 384 (423)
T 3qs7_E 313 ---PSQSALVTIVEKGFINATNSS-EDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFC 384 (423)
T ss_dssp ---EEEEEEEEEESSCEEEEC----CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEEC
T ss_pred ---CCceEEEEEEeCCcceEcCCC-ccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccc----cCCcEEEEEe
Confidence 666788999888876554432 24456789999999999999999999999999886432100 0011112244
Q ss_pred CCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCc
Q psy8139 611 ARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGK 647 (1101)
Q Consensus 611 l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~ 647 (1101)
+...|.|.|+|.|.|..|....+..|.|.+.|.+|..
T Consensus 385 ~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~~ 421 (423)
T 3qs7_E 385 NHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHHH 421 (423)
T ss_dssp CCTTCCSCEEEEEEETTEEEEEEEEEC----------
T ss_pred cccccCEEEEEEEEcCCceEEEEEEEEEecCCccccc
Confidence 5668999999999999999999999999999888764
No 28
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.90 E-value=5.3e-21 Score=209.89 Aligned_cols=270 Identities=19% Similarity=0.289 Sum_probs=214.9
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..||.|...|.++.+..|++++|.|.+.|.|.+.+.|++++..+.....+.+...++...|.|.++...|+|.|+|.|.|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 46888999999999999999999999999999999999999999887777777667778999999999999999999999
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEc
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRIS 609 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~ 609 (1101)
..|.....+.|.|..+|.+...+. ....+..|+.+.|.|.+.|.|.+.+.|++++..+.....+.+........|.|.
T Consensus 83 ~~g~~~~~~~l~V~~~p~~~~~~~--~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (284)
T 2rik_A 83 VAGKDSCSAQLGVQEPPRFIKKLE--PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMY 160 (284)
T ss_dssp TTEEEEEEEEEEEECCCEEEECCC--SEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEEC
T ss_pred CCceEEEEEEEEccCCCcccccCC--CceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEC
Confidence 999888889999999887654432 234678899999999999999999999999999987777777666778899999
Q ss_pred cCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCcc-EEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCC
Q psy8139 610 DARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKA-KVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPG 688 (1101)
Q Consensus 610 ~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~-~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~ 688 (1101)
++...|.|.|+|.|.|..|.......+.|..+|.....+ ......+..+.|.|...+.
T Consensus 161 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~--------------------- 219 (284)
T 2rik_A 161 NLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGT--------------------- 219 (284)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSS---------------------
T ss_pred CCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEec---------------------
Confidence 999999999999999999988888899998877332211 2334567789999985321
Q ss_pred CCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCC
Q psy8139 689 KPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVV 768 (1101)
Q Consensus 689 ~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 768 (1101)
....+.|.... .++. .+........ .....+.|.++.......|.|.|.|..
T Consensus 220 -------------p~~~v~W~~~~----~~~~---------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 271 (284)
T 2rik_A 220 -------------PPFQVSWHKDK----RELR---------SGKKYKIMSE--NFLTSIHILNVDSADIGEYQCKASNDV 271 (284)
T ss_dssp -------------SCCEEEEEETT----EEEC---------BTTTEEEEEE--TTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred -------------CCCEEEEEECC----EECc---------CCCCEEEEEc--CCEEEEEEcCCCcccCEEEEEEEEeCC
Confidence 11356776421 1110 0111111111 234578899999999999999999999
Q ss_pred cc
Q psy8139 769 GF 770 (1101)
Q Consensus 769 G~ 770 (1101)
|.
T Consensus 272 G~ 273 (284)
T 2rik_A 272 GS 273 (284)
T ss_dssp EE
T ss_pred Cc
Confidence 96
No 29
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.90 E-value=1.9e-23 Score=255.24 Aligned_cols=409 Identities=15% Similarity=0.094 Sum_probs=244.2
Q ss_pred hhhhh-cccccCcceEEEeeecccccccccceeeec--cCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEE
Q psy8139 307 KKTAD-NQFENQAPLYVRLEEAITGLNVGTDLYCVI--KKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGY 383 (1101)
Q Consensus 307 ~l~i~-~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v--~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y 383 (1101)
.+.|. ++.....+.|.|.|.|..|.+.+....+.. ..+|.+|..+.+. +. ..+.+++.|+|.+|...++ .+.+|
T Consensus 158 ~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~-~~-~~~~~~v~l~W~~p~~~~~-~~~~Y 234 (589)
T 3l5h_A 158 SCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVI-NS-EELSSILKLTWTNPSIKSV-IILKY 234 (589)
T ss_dssp CCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEE-CT-TTCTTCEEEECCCCGGGGT-SCEEE
T ss_pred EEEECCCCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEE-ec-CCCCCeEEEEeCCCCCCCe-eeEEE
Confidence 34555 455556667778888888887665544433 3467777666551 12 5678999999999865444 78999
Q ss_pred EEEEEecCCCceEEcCcc--ccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCC-CCCeeeecCc
Q psy8139 384 LVEHRRTGSPYWVRASPH--MVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPA-AAPSFIRALH 460 (1101)
Q Consensus 384 ~v~~~~~~~~~w~~~~~~--~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~-~~P~~~~~p~ 460 (1101)
.|+++..+...|...... .....++.|.+|.|++.|.|+|.|.|..|.+.+|.+|..+.+......+ .+|.......
T Consensus 235 ~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~ 314 (589)
T 3l5h_A 235 NIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKID 314 (589)
T ss_dssp EEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECC
T ss_pred EEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEee
Confidence 999999887788765321 2345789999999999999999999999998888777777654433222 3333211100
Q ss_pred eeEEccCCeEEEEEEEec--cCC---C--eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 461 DTTALEDEKVEFTVQVEG--IPT---P--KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~g--~p~---~--~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
.........+.|.|.... .+. . .|.|...+.... . .......+++ +.++..|.+.+.|.|..|.
T Consensus 315 ~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~~~-----~--~~~~~~~~~~--l~~~~~Y~~~V~A~n~~G~ 385 (589)
T 3l5h_A 315 PSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ-----N--YTVNATKLTV--NLTNDRYLATLTVRNLVGK 385 (589)
T ss_dssp SCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSCCC-----B--CCCSSSCCEE--CCCSSCCCEEEEEEBTTBC
T ss_pred cCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCCce-----e--eccCCceEEE--EeCCCCEEEEEEEEeCCcc
Confidence 000122344555554211 111 1 234432221110 0 1111123333 7788999999999999997
Q ss_pred eEEEEEEeeccCCccccCCCCCCCeEEe-eCCEEEEEEEEeecC--CCeeEEEECCeecCCCCceEEEeecceEEEEEcc
Q psy8139 534 SITKARLRLEAPPTIRLPKQYEDGLLFE-MGEIIKLKVSMAGMP--PPTARWLHNGEPLTSGGRYEITHTDRYLNLRISD 610 (1101)
Q Consensus 534 ~~~s~~l~V~~~p~~~~~~~~~~~~~v~-~g~~~~l~c~~~g~p--~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~ 610 (1101)
+..+. +.+...+.. ++.....+.+. .+..+.|.+.....+ ...|.|...+........+..........+.+.+
T Consensus 386 ~~~s~-~~~~~~~~~--~~~p~~~l~~~~~~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (589)
T 3l5h_A 386 SDAAV-LTIPACDFQ--ATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGN 462 (589)
T ss_dssp CCCCC-CCCCCTTCC--CCSCCCSCEEEECSSSEEEECCCCSSCCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSC
T ss_pred CCCeE-EEeeccccc--CCCCcceEEEEECCCeEEEEEECCCCCccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhc
Confidence 76542 222211111 11111122222 234444444332111 2245565433221111111112223345667799
Q ss_pred CCCCCCeEEEEEEEeCCCCceeEEEEEEec---CCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCC
Q psy8139 611 ARRADRGEYQAHGVNSLGEDVASFLVTVTD---RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPP 687 (1101)
Q Consensus 611 l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~---~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p 687 (1101)
|.++..|.|++.|.|..|.+..+. +.+.. .|.+|.++.+...+.+++.|+|.+|
T Consensus 463 L~p~t~Y~~~V~A~~~~g~g~~~~-~~~~t~~~~P~~pp~l~~~~~~~~sv~l~W~~~---------------------- 519 (589)
T 3l5h_A 463 LAESKCYLITVTPVYADGPGSPES-IKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQL---------------------- 519 (589)
T ss_dssp CCSSSEEEEEECBEETTEECCCEE-EEEESSCCCCSSCCCCCEECCCSSCBEEBCCCC----------------------
T ss_pred cccCcEEEEEEEEEeCCcccCCEE-EEEEeccCCCCCCCeEEEeecccceEEEEecCC----------------------
Confidence 999999999999999988766543 22222 3444445655555555666666542
Q ss_pred CCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcC
Q psy8139 688 GKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENV 767 (1101)
Q Consensus 688 ~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 767 (1101)
|..++++.|.+|.|.|+..++..|..... ...++++|.+|.|++.|.|+|.|.|.
T Consensus 520 -----------------------~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~A~n~ 574 (589)
T 3l5h_A 520 -----------------------PVDVQNGFIRNYTIFYRTIIGNETAVNVD--SSHTEYTLSSLTSDTLYMVRMAAYTD 574 (589)
T ss_dssp -----------------------CHHHHCSCEEEEEECCBCSSCCCCCEEEC--TTCCBCCBCSCCSSCCEECCEEEEET
T ss_pred -----------------------CHHHcCccceeEEEEEEeCCCCeEEEEeC--CcccEEEecCCCCCCEEEEEEEEEeC
Confidence 12334457889999988877666643332 67889999999999999999999999
Q ss_pred CccCCCCCCCCc
Q psy8139 768 VGFSEPGPLSEP 779 (1101)
Q Consensus 768 ~G~g~~S~~s~~ 779 (1101)
.| |++|+...+
T Consensus 575 ~G-~~~S~~~~~ 585 (589)
T 3l5h_A 575 EG-GKDGPEFTF 585 (589)
T ss_dssp TE-EEECCCCEE
T ss_pred CC-CCCCCCeEE
Confidence 99 777765443
No 30
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.90 E-value=5.4e-22 Score=242.17 Aligned_cols=315 Identities=15% Similarity=0.146 Sum_probs=210.0
Q ss_pred hhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEE
Q psy8139 307 KKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVE 386 (1101)
Q Consensus 307 ~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~ 386 (1101)
.|.|.++...|+|.|+|.|.|..|.. +..+.+.|..+| |.... ......++|.|.... ...+...+...
T Consensus 186 ~L~I~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~--p~~~~------~~~G~~v~l~C~~~~--~~~~~~~~~w~ 254 (585)
T 2ocw_A 186 SVVINQLRLSDAGQYLCQAGDDSNSN-KKNADLQVLKPE--PELVY------EDLRGSVTFHCALGP--EVANVAKFLCR 254 (585)
T ss_pred EEEEccCChhHCeEEEEEeccCCccc-cceEEEEEccCC--CceeE------EcCCCcEEEEEEcCC--CCCCceEEEEE
Confidence 69999999999999999998877764 334566565432 11111 112344555554310 00000111111
Q ss_pred EEec----------C-----CCceEEcCccccccc--eEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCC
Q psy8139 387 HRRT----------G-----SPYWVRASPHMVEDT--ELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSP 449 (1101)
Q Consensus 387 ~~~~----------~-----~~~w~~~~~~~~~~~--~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~ 449 (1101)
+... + .......... ...+ .|.|.+++..|.|.|+|.|.|. |....+.....+.+.+.
T Consensus 255 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~--- 329 (585)
T 2ocw_A 255 QSSGENCDVVVNTLGKRAPAFEGRILLNPQ-DKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVN--- 329 (585)
T ss_pred eCCCCCcceEEeCCCcCCcccCCceEeecc-CCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEe---
Confidence 0100 0 0001111000 1123 7999999999999999999995 44332222233445543
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE----EEEE--CCE--Eeec---------CCcEEEEe--cCCeeEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV----SWYK--DGF--EIFS---------SRRQRIVT--DNDISTL 510 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v----~W~~--~g~--~~~~---------~~~~~~~~--~~~~~~l 510 (1101)
.+|.+...|....+..|+++.|.|.+.+.|.+.+ .|++ +|. .+.. ..++.+.. ..+..+|
T Consensus 330 -~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L 408 (585)
T 2ocw_A 330 -EESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTV 408 (585)
T ss_pred -cccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEE
Confidence 4566777788889999999999999999999977 7999 876 4432 23444443 2333459
Q ss_pred EEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEe----ecCCCeeEEEECC
Q psy8139 511 IIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMA----GMPPPTARWLHNG 586 (1101)
Q Consensus 511 ~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~----g~p~~~v~W~~~g 586 (1101)
.|.++...|+|.|+|.| |..|.....+.|.|..+|..... +....+..|+.+.|.|.+. +.|.+.+.|+++|
T Consensus 409 ~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~---~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g 484 (585)
T 2ocw_A 409 ILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKV---PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG 484 (585)
T ss_pred EECCCChhhCEEEEEcc-cCCCccceeEEEEEecCcccccc---CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecC
Confidence 99999999999999999 98888888888998764333222 2345788999999999997 6778899999999
Q ss_pred eecCCCCc------eE-EEeecceEEEEEccCCCCCCeEEEEEEEeCCCCcee-EEEEEEecCC
Q psy8139 587 EPLTSGGR------YE-ITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVA-SFLVTVTDRP 642 (1101)
Q Consensus 587 ~~l~~~~~------~~-~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~-s~~l~v~~~P 642 (1101)
..+..... +. +...+....|.|.++...|.|.|+|.|.|..|.... .+.|.|..+|
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 485 CQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred ceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 87743211 11 112234579999999999999999999999997665 4888998776
No 31
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.89 E-value=4.8e-23 Score=247.71 Aligned_cols=315 Identities=13% Similarity=0.081 Sum_probs=196.8
Q ss_pred hhhhhhhcccccCcc-eEEEeeecccccccccceeeeccCCCCCC----CCCcccCCCCCCCCCeeEEEEeCCCCCCCcC
Q psy8139 305 QAKKTADNQFENQAP-LYVRLEEAITGLNVGTDLYCVIKKPPGPP----GKPQLLPDSPSLDRDVFTIRWEPPEYDGGSP 379 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g-~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P----~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~ 379 (1101)
.+.|.|.++...|+| .|.|.+.|..|...+..+.+.+...+..| ..|... .......++|.|.....+. +
T Consensus 167 ~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~---~v~~G~~v~L~C~~~g~p~--p 241 (524)
T 2ec8_A 167 KAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASY---LLREGEEFTVTCTIKDVSS--S 241 (524)
T ss_dssp TTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEE---EEETTSCEEEEEEEEESST--T
T ss_pred CccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcc---eEEcCCcEEEEEEEecCCC--c
Confidence 456999999999999 99999988777665556666665222211 111111 0123455666665531110 1
Q ss_pred eeEEEEEEEecCCC---ceEE---cC--ccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCC
Q psy8139 380 VLGYLVEHRRTGSP---YWVR---AS--PHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAA 451 (1101)
Q Consensus 380 i~~Y~v~~~~~~~~---~w~~---~~--~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~ 451 (1101)
. .+ .|...+.. .+.. .. ........|.|.++...|.|.|+|.|.|..|.... .+.+.+. .
T Consensus 242 ~-~i--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~-----~~~l~V~----~ 309 (524)
T 2ec8_A 242 V-YS--TWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANV-----TTTLEVV----D 309 (524)
T ss_dssp C-EE--EEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEE-----EEEEEEE----S
T ss_pred E-EE--EEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEE-----EEEEEEe----c
Confidence 1 11 12111111 1110 00 01123468999999999999999999998886532 3445443 5
Q ss_pred CCeeeecC---ceeEEccCCeEEEEEEEeccCCCe-EEEEECCEEeecCC-cEEEEecC----CeeEEEEeecCCCCCEE
Q psy8139 452 APSFIRAL---HDTTALEDEKVEFTVQVEGIPTPK-VSWYKDGFEIFSSR-RQRIVTDN----DISTLIIHQAALMDEGE 522 (1101)
Q Consensus 452 ~P~~~~~p---~~~~v~~g~~v~L~C~~~g~p~~~-v~W~~~g~~~~~~~-~~~~~~~~----~~~~l~I~~l~~~d~g~ 522 (1101)
+|.+...| ....+..|+++.|.|.+.|.|.|. +.|+++|..+.... .+.....+ ....|.|.++...|+|.
T Consensus 310 ~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 389 (524)
T 2ec8_A 310 KGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGT 389 (524)
T ss_dssp SCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEE
T ss_pred cCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeE
Confidence 66665544 368899999999999999999999 99999998876554 33322222 34689999999999999
Q ss_pred EEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecC--------CCCc
Q psy8139 523 IKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLT--------SGGR 594 (1101)
Q Consensus 523 Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~--------~~~~ 594 (1101)
|+|.|.|..|....++.|.|..+|.+...+. +..| .|.|.+.|.|.|.+.|++++..+. .+..
T Consensus 390 Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~------~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~ 460 (524)
T 2ec8_A 390 YTFLVSNSDVNAAIAFNVYVNTKPEILTYDR------LVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQ 460 (524)
T ss_dssp EEEEEECSSCEEEEEEEEEECEEEEEEEEEC------CSSS---CEEEEEEEESCCEEECCCC----------CCCCCCC
T ss_pred EEEEEEecCceEEEEEEEEEecCCeEeeccc------CcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCce
Confidence 9999999999988899999999888765443 2234 899999999999999999976552 1111
Q ss_pred eEEEeecceEEEE----EccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCC
Q psy8139 595 YEITHTDRYLNLR----ISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPP 645 (1101)
Q Consensus 595 ~~~~~~~~~~sl~----i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P 645 (1101)
.........+.+. +......|.|.|+|.|.|..|.....+.|.|.+.|...
T Consensus 461 ~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~~ 515 (524)
T 2ec8_A 461 TLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQ 515 (524)
T ss_dssp CCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC-------
T ss_pred eeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHHH
Confidence 1100111122222 44444689999999999999999888888888766543
No 32
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.89 E-value=2.3e-20 Score=213.89 Aligned_cols=338 Identities=16% Similarity=0.156 Sum_probs=213.9
Q ss_pred CCCCCcccCCCCCCCCC-eeEEEEeCCCCCCCcCeeEEEEEEEecCCCc--eEEcCccccccceEEEcCccCCccEEEEE
Q psy8139 347 PPGKPQLLPDSPSLDRD-VFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY--WVRASPHMVEDTELMVSGLEPGWRYQFRI 423 (1101)
Q Consensus 347 ~P~~p~~l~~~~~~~~~-sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~--w~~~~~~~~~~~~l~i~~L~p~d~y~y~c 423 (1101)
|+.+|..+.+. ..+.+ ++.|+|.+|. . ..+.+|.|++...++.. +... .......++.|.+|.|++.|.|+|
T Consensus 2 P~~~P~~l~~~-~~~~~~sv~l~W~~~~-~--~~~~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V 76 (375)
T 3t1w_A 2 PLSPPTNLHLE-ANPDTGVLTVSWERST-T--PDITGYRITTTPTNGQQGNSLEE-VVHADQSSCTFDNLSPGLEYNVSV 76 (375)
T ss_dssp CCCCCEEEEEE-EETTTTEEEEEEECCS-C--SSCCEEEEEEEETTCTTSCCEEE-EEETTCCEEEECCCCTTCCEEEEE
T ss_pred CCCCCCccEEE-ecCCCeEEEEEEeCCC-C--CCeeeEEEEEEECCCCCCcceeE-EcCCCccEEEEcCCcCCCEEEEEE
Confidence 34455555444 66778 9999999983 2 26899999998765421 2221 122456789999999999999999
Q ss_pred EEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEcc--CCeEEEEEEEeccCCC---eEEEEECCEEeecCCc
Q psy8139 424 TAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALE--DEKVEFTVQVEGIPTP---KVSWYKDGFEIFSSRR 498 (1101)
Q Consensus 424 ~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~--g~~v~L~C~~~g~p~~---~v~W~~~g~~~~~~~~ 498 (1101)
.|.|..|.+.+ ..+..... .| .|.++.+.. ...+.|.|........ .|.|...+.. ...
T Consensus 77 ~a~~~~g~s~~------~~~~~~~~---~p----~p~~l~~~~~~~~si~l~W~~~~~~~i~~Y~v~~~~~~~~---~~~ 140 (375)
T 3t1w_A 77 YTVKDDKESVP------ISDTIIPE---VP----QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEG---IPI 140 (375)
T ss_dssp EEEETTEECCC------EEEEECCC---CC----CCSCCEEECCCSSEEEEECCCCCCTTEEEEEEEEEESSSC---CSC
T ss_pred EEEcCCCCCCc------EEeeEcCC---CC----CCceEEEEecCCCeEEEEEECCCCCCceEEEEEEEECCCC---Cce
Confidence 99998776543 33333222 12 134444433 3445555543211111 2444433211 112
Q ss_pred EEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC
Q psy8139 499 QRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP 578 (1101)
Q Consensus 499 ~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~ 578 (1101)
...........+.|.+|.++..|.|.+.|.|..|.+..+.......+| +| ..+.+...+....
T Consensus 141 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~----~p-------------~~l~~~~~~~~si 203 (375)
T 3t1w_A 141 FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP----PP-------------TDLRFTNIGPDTM 203 (375)
T ss_dssp EEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEECCCC----CC-------------EEEEEESCCSSCE
T ss_pred eEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeeecCCC----CC-------------ceeEEEecccCEE
Confidence 233344455689999999999999999999998876554422222121 11 1122222233344
Q ss_pred eeEEEECC-eecC-----------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCC
Q psy8139 579 TARWLHNG-EPLT-----------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPG 646 (1101)
Q Consensus 579 ~v~W~~~g-~~l~-----------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~ 646 (1101)
.++|.... ..+. ...............+.+.+|.++..|.|++.|.|..|.+... ...+...|.+|.
T Consensus 204 ~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~-~~~~~t~p~~P~ 282 (375)
T 3t1w_A 204 RVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL-RGRQKTGLDSPT 282 (375)
T ss_dssp EEEEECCSSCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECCCCCCE
T ss_pred EEEEcCCCCCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCce-eeEEecCCCCCC
Confidence 44554321 1100 0112233344455789999999999999999999998876554 344556788888
Q ss_pred ccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEE
Q psy8139 647 KAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEH 726 (1101)
Q Consensus 647 ~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~ 726 (1101)
++.+..++.+++.|+|++|. +.+.+|.|.|
T Consensus 283 ~l~~~~~~~~sv~l~W~~p~--------------------------------------------------~~~~~Y~v~~ 312 (375)
T 3t1w_A 283 GIDFSDITANSFTVHWIAPR--------------------------------------------------ATITGYRIRH 312 (375)
T ss_dssp EEEEESCCSSCEEEEEECCS--------------------------------------------------SCCSEEEEEE
T ss_pred ccEeeeccCCEEEEEECCCC--------------------------------------------------cceeeEEEEE
Confidence 88877777777777777542 2477888888
Q ss_pred EeCCC-CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCC
Q psy8139 727 RRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPG 774 (1101)
Q Consensus 727 ~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 774 (1101)
...+. ..+.... .....++++|.+|.|++.|.|+|.|.|..|.|++.
T Consensus 313 ~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~ 360 (375)
T 3t1w_A 313 HPEHFSGRPREDR-VPHSRNSITLTNLTPGTEYVVSIVALNGREESPLL 360 (375)
T ss_dssp EETTCCSSCEEEE-EETTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred EECCCCCcceeEE-cCCCccEEEECCCCCCCEEEEEEEEECCCCCCCce
Confidence 87665 3333322 22677899999999999999999999999998764
No 33
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.89 E-value=1.4e-21 Score=230.21 Aligned_cols=326 Identities=13% Similarity=0.075 Sum_probs=198.9
Q ss_pred hhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCC-CCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEE
Q psy8139 306 AKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPP-GKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYL 384 (1101)
Q Consensus 306 ~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P-~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~ 384 (1101)
..|.|.++.. |.| |.|.+.+. |...+..+.+.+..+|... ..|... .......++|.|.... ..+...+.
T Consensus 50 ~~l~i~~v~~-d~g-Y~C~a~~~-~~~~~~~~~l~V~~~P~~~~~~~~~~---~v~~G~~v~L~C~~~g---~~~~~~~~ 120 (450)
T 1z7z_I 50 KVYELSNVQE-DSQ-PMCYSNCP-DGQSTAKTFLTVYWTPERVELAPLPS---WQPVGKNLTLRCQVEG---GAPRANLT 120 (450)
T ss_dssp EEEEEEEECS-CBC-CEEEEEET-TEEEEEECEEEEEBCCSEEEECCCCS---EECTTSEEEEEEEEEC---CBCGGGEE
T ss_pred eEEEEEeccc-CCe-eEEEEeCC-CCcceeEEEEEEEeCCCcceecCCCc---eEeeCCeEEEEEEecC---CCCCcCcE
Confidence 3688999987 999 99999543 3333444566665544322 111111 0223567888887642 21222223
Q ss_pred EEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCC---CCCCcceEEEeccCCCCCCeeeecCce
Q psy8139 385 VEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEP---GPLSEPLTVTYQRSPAAAPSFIRALHD 461 (1101)
Q Consensus 385 v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~---s~~s~~vtv~~~~~~~~~P~~~~~p~~ 461 (1101)
+.|...+................|.|.++...|.|.|+|.|.|..|.... ...+....+.+...+..+|.+...
T Consensus 121 v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~--- 197 (450)
T 1z7z_I 121 VVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSP--- 197 (450)
T ss_dssp EEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECC---
T ss_pred EEEeeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCc---
Confidence 33332221110000011122358999999999999999999999775321 111233344443333445554322
Q ss_pred eEEccCCeEEEEEEEecc-C--CCeEEEEECCEEeecCCcEEEEecCCeeEEE-EeecCCCCCE--EEEEEEEeCCCceE
Q psy8139 462 TTALEDEKVEFTVQVEGI-P--TPKVSWYKDGFEIFSSRRQRIVTDNDISTLI-IHQAALMDEG--EIKCTATNRAGHSI 535 (1101)
Q Consensus 462 ~~v~~g~~v~L~C~~~g~-p--~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~-I~~l~~~d~g--~Y~C~a~n~~g~~~ 535 (1101)
..+..|+.+.|.|.+.|. | .+.+.|++++..+.. . +...+....+. ..++...|+| .|+|.|.|..|...
T Consensus 198 ~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~--~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~ 273 (450)
T 1z7z_I 198 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--T--VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE 273 (450)
T ss_dssp SEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC--E--EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEE
T ss_pred eeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--e--EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEE
Confidence 678899999999999998 7 789999999988765 2 22222222221 2277899999 99999999999988
Q ss_pred EEEEEeecc--CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCC
Q psy8139 536 TKARLRLEA--PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARR 613 (1101)
Q Consensus 536 ~s~~l~V~~--~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~ 613 (1101)
..+.|.|.. +|.+... ...+..|+.+.|.|.+. |.+.+.| +|..+.. .+....|.|.++..
T Consensus 274 ~~~~l~V~~~~~p~i~~~-----~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~--------~~~~~~L~i~~~~~ 336 (450)
T 1z7z_I 274 TLQTVTIYSFPAPNVILT-----KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP--------LGPRAQLLLKATPE 336 (450)
T ss_dssp EEEEEEEECCCCCEEEES-----CSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGG
T ss_pred EEEEEEEecCCCCeEecC-----CeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCC--------CCceEEEEEecCcc
Confidence 888888887 4444322 23788999999999998 8899999 7766521 12244789999999
Q ss_pred CCCeEEEEEEEeCCC-Cc---eeEEEEEEecCCCCCCc---cEEEEecCCeEEEEeec
Q psy8139 614 ADRGEYQAHGVNSLG-ED---VASFLVTVTDRPLPPGK---AKVVMTLGKSVTLSWSE 664 (1101)
Q Consensus 614 ~~~y~y~c~A~N~~G-~~---~~s~~l~v~~~P~~P~~---~~~~~~~~~sv~lsW~~ 664 (1101)
.|.|.|+|.|.|..| .. ..+..|.|..+|..... .......+..+.|.|..
T Consensus 337 ~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~ 394 (450)
T 1z7z_I 337 DNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQA 394 (450)
T ss_dssp GTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCC
T ss_pred cCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEec
Confidence 999999999997665 32 35667777766633221 23455678889998875
No 34
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.88 E-value=3.1e-21 Score=223.51 Aligned_cols=390 Identities=14% Similarity=0.100 Sum_probs=243.3
Q ss_pred hhhhhcccccCcceEEEeeecccccccccceeeeccCCCCC--CCCCcccCCCCCCCCCeeEEEEeCCCCC-CCcCeeEE
Q psy8139 307 KKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGP--PGKPQLLPDSPSLDRDVFTIRWEPPEYD-GGSPVLGY 383 (1101)
Q Consensus 307 ~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~--P~~p~~l~~~~~~~~~sv~l~W~~p~~~-g~~~i~~Y 383 (1101)
.+.|..+..+|. .++.. ...+. ...+++-+.+.. |.+|..|..........+.|+|..+... ...-...|
T Consensus 54 ~~~~~~~~~~~~-~~~~~--~~~~~----~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~ 126 (488)
T 2q7n_A 54 NVKIPALSPGDH-EVTIN--YLNGF----QSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATW 126 (488)
T ss_dssp EEEEECCCSSCE-EEEEE--ESSSC----EEEEEECSTTCEECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEE
T ss_pred eeEcccCCCCcc-eEEEe--eccCc----eeEEEEecCccccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEE
Confidence 355666677774 44432 23322 334444444444 7777777655444578999999887321 11113578
Q ss_pred EEEEEecCC--CceEEcCccccccc----eEEEcCcc--CCccEEEEEEEEe----cCCCCCCCCCCcceEEEeccCCCC
Q psy8139 384 LVEHRRTGS--PYWVRASPHMVEDT----ELMVSGLE--PGWRYQFRITAEN----VVGFSEPGPLSEPLTVTYQRSPAA 451 (1101)
Q Consensus 384 ~v~~~~~~~--~~w~~~~~~~~~~~----~l~i~~L~--p~d~y~y~c~A~n----~~G~~~~s~~s~~vtv~~~~~~~~ 451 (1101)
.|++....+ ..|........... ...-+.+. ....|.++++... ..|.+.+|.+|..-++..+ .
T Consensus 127 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~w~s~~pl~c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~----~ 202 (488)
T 2q7n_A 127 EIKVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSDLPLQCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWI----R 202 (488)
T ss_dssp EEECCCSSSSCSCCCEECCEECSSSCBCCEEEEECSSCCSSSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCC----C
T ss_pred EEEEEEeccceEEEEEEEEEEecCCCceeEeeccCCCcccccceEEEEEEEeccccccCCCCCcCCCChhhcCCc----C
Confidence 887543322 22322111101111 22323332 3668899999986 5577889999988877654 4
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
+..+...|.+..+..|++++|.|.+. .+.+.|.++|..+... . ..+..+.|+|.++...|+|.|.|.+.+
T Consensus 203 ~t~i~v~P~~~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~---r--i~~~~~~L~I~nl~~sd~g~y~~~C~~-- 272 (488)
T 2q7n_A 203 NTETNVFPQDKVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLI---H--LYGQTVAIHILNIPVSENSGTNIIFIT-- 272 (488)
T ss_dssp CSSCCEECTTCEEESSCCCEEEECCS---SCEEEEEETTEECCCE---E--CSSSCEEEECCSCCCCCSSCEEEEEEE--
T ss_pred CCceEECCCCCEEcCCCCEEEEEECC---CCEEEEEECCEECchh---h--ccceEEEEEEeCCCcccCCcEEEEEEc--
Confidence 45566778888899999999999988 3589999999877543 1 245567999999999988888776663
Q ss_pred CceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeec---CCCCceEEEe---------
Q psy8139 532 GHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPL---TSGGRYEITH--------- 599 (1101)
Q Consensus 532 g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l---~~~~~~~~~~--------- 599 (1101)
+.....+.+.|..+|..+. . +.|.........++|....... .....|.+..
T Consensus 273 ~~~i~~~~l~v~~pP~~P~------n----------l~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c 336 (488)
T 2q7n_A 273 DDDVYGTVVFAGYPPDVPQ------K----------LSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVF 336 (488)
T ss_dssp SSCEEEEEEEEECCCCCCC------S----------CEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEE
T ss_pred CCeEEEEEEEeeCCCCCCc------c----------cEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCC
Confidence 2233467788877765321 1 2333333333334444321110 0011122111
Q ss_pred ------ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEe----cCCCCCCccEEEEecCCeEEEEeecCCCCC
Q psy8139 600 ------TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVT----DRPLPPGKAKVVMTLGKSVTLSWSEPEDDG 669 (1101)
Q Consensus 600 ------~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~----~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~ 669 (1101)
.+....+.+..+...+.|.|+|.|.|..|.... .+.+. .+|+||.++.+...+.+++.|+|++|...
T Consensus 337 ~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~S--~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~- 413 (488)
T 2q7n_A 337 HRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQS--AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNF- 413 (488)
T ss_dssp ECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEEE--EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEEC-
T ss_pred ccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCccc--eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCC-
Confidence 022345666544445899999999999998543 33332 36889998888877788888888876322
Q ss_pred CcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCcee-ecccccCccEE-
Q psy8139 670 GCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVR-ASPHMVEDTEL- 747 (1101)
Q Consensus 670 g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~-~~~~~~~~~~~- 747 (1101)
++.+++|.|.|+..+...|.. ........+.+
T Consensus 414 ----------------------------------------------~g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~ 447 (488)
T 2q7n_A 414 ----------------------------------------------TKINLLCQIEICKANSKKEVRNATIRGAEDSTYH 447 (488)
T ss_dssp ----------------------------------------------SSSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEE
T ss_pred ----------------------------------------------CCcceEEEEEEEECCCCCceEEEEEecCCCcEEE
Confidence 235788999998887766642 22111123455
Q ss_pred -EEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 748 -MVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 748 -~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
+|.+|.|++.|.|+|+|.| .|.|.+|++|......
T Consensus 448 v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~ 483 (488)
T 2q7n_A 448 VAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHL 483 (488)
T ss_dssp EEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBC
T ss_pred EEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEE
Confidence 9999999999999999999 9998788877666553
No 35
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.88 E-value=9.7e-22 Score=218.95 Aligned_cols=267 Identities=15% Similarity=0.160 Sum_probs=173.5
Q ss_pred cCceeEEccCCeEEEEEEEecc-----CCCeEEEEECCEEeecCCcEEEEecCC-eeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGI-----PTPKVSWYKDGFEIFSSRRQRIVTDND-ISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~-----p~~~v~W~~~g~~~~~~~~~~~~~~~~-~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
.|.+..+..|++++|.|.+.+. |.+.+.|.++|..+.. .++.....+. .+.|+|.++...|+|.|.|.+.+..
T Consensus 6 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~ 84 (313)
T 2d9q_B 6 SVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPG-GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNS 84 (313)
T ss_dssp EESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTT-CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSS
T ss_pred ECCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCc-cceEEEecCeEEEEEEEeccCCCccceEEeeecCCC
Confidence 3556778999999999999997 6789999999987743 2222222222 2689999999999999999986654
Q ss_pred CceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCCeeEEEECCeecCCCCceEEEe-----------
Q psy8139 532 GHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPPTARWLHNGEPLTSGGRYEITH----------- 599 (1101)
Q Consensus 532 g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~~v~W~~~g~~l~~~~~~~~~~----------- 599 (1101)
+.....+.|.|..+|.. +..+.|...+. ....++|........ ...|.+..
T Consensus 85 ~~~~~~~~l~v~~~P~~----------------P~~l~c~~~~~~~~~~~~W~~~~~~~~-~~~Y~l~~~~~~~~~~~~~ 147 (313)
T 2d9q_B 85 LQILDQVELRAGYPPAI----------------PHNLSCLMNLTTSSLICQWEPGPETHL-PTSFTLKSFKSRGNCQTQG 147 (313)
T ss_dssp EEEEEEEEEEECCCCCC----------------CEEEEEEEETTTTEEEEEEECCSCCSS-CCEEEEEEEECCTTSCSCC
T ss_pred ceeEEEEEEccCCCCCC----------------CccceeeECCCCccEEEEecCCCCCCC-ceeEEEEEEecCCCcccCC
Confidence 44445567777666532 23455555532 345566654321110 01122111
Q ss_pred --------ecceEEEEE--ccCCCCCCeEEEEEEEeCCCCcee-EEEEEEe--cCCCCCCccEEEEecCCeEEEEeecCC
Q psy8139 600 --------TDRYLNLRI--SDARRADRGEYQAHGVNSLGEDVA-SFLVTVT--DRPLPPGKAKVVMTLGKSVTLSWSEPE 666 (1101)
Q Consensus 600 --------~~~~~sl~i--~~l~~~~~y~y~c~A~N~~G~~~~-s~~l~v~--~~P~~P~~~~~~~~~~~sv~lsW~~p~ 666 (1101)
......+.+ .+|.+...|.|+|.|.|..|.+.+ ...+... .+|+||.++.+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~----------- 216 (313)
T 2d9q_B 148 DSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPE----------- 216 (313)
T ss_dssp CCEEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC--------------
T ss_pred cccccCCCCCCCcEEEECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEEecc-----------
Confidence 112234455 459999999999999999998533 2222211 2477776665443210
Q ss_pred CCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEE-eCCCCCceeecccccCcc
Q psy8139 667 DDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHR-RTGSPYWVRASPHMVEDT 745 (1101)
Q Consensus 667 ~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~-~~~~~~~~~~~~~~~~~~ 745 (1101)
....+++++.|+|++|.. ++..+++|.|+|+ ..++..|..+.......+
T Consensus 217 -----------------------------~~~~~~~~l~l~W~~p~~-~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~ 266 (313)
T 2d9q_B 217 -----------------------------AAPPQAGCLQLSWEPWQP-GLHINQKCELRHKPQRGEASWALVGPLPLEAL 266 (313)
T ss_dssp ---------------------------------CCSCEEEEEECCGG-GTTSCEEEEEEEEESSSCCCCEEEEEECSCEE
T ss_pred -----------------------------cccCCCCeEEEEECCCCC-CCceeEEEEEEEccCCCCCCcEEcccccCcce
Confidence 000023445555555432 2333579999999 667778987644334567
Q ss_pred EEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 746 ELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 746 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
.++|.+|.|++.|.|+|+|.|..|.|.+|+++......
T Consensus 267 ~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~ 304 (313)
T 2d9q_B 267 QYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304 (313)
T ss_dssp EEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEEC
T ss_pred EEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCcccee
Confidence 89999999999999999999999999999999887765
No 36
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.88 E-value=3.1e-21 Score=237.60 Aligned_cols=321 Identities=10% Similarity=0.022 Sum_probs=191.1
Q ss_pred cceEEEEEccCCCCCCeEEEEEEEeCCCC-ce--eEEEEEEe---cCCCCCCccEEEEe--cCC---eEEEEeecCCCCC
Q psy8139 601 DRYLNLRISDARRADRGEYQAHGVNSLGE-DV--ASFLVTVT---DRPLPPGKAKVVMT--LGK---SVTLSWSEPEDDG 669 (1101)
Q Consensus 601 ~~~~sl~i~~l~~~~~y~y~c~A~N~~G~-~~--~s~~l~v~---~~P~~P~~~~~~~~--~~~---sv~lsW~~p~~~~ 669 (1101)
.....++|.+|.+++.|.|+|.|.|..|. +. .+..+... .+|.+|.++.+... +.+ +|.|+|++|...+
T Consensus 220 ~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~ 299 (680)
T 1zlg_A 220 TTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPD 299 (680)
T ss_pred cCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCC
Confidence 34567899999999999999999999883 22 22233322 36788888888776 666 7777777664332
Q ss_pred CcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeC-------CCCCceeeccccc
Q psy8139 670 GCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRT-------GSPYWVRASPHMV 742 (1101)
Q Consensus 670 g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~-------~~~~~~~~~~~~~ 742 (1101)
++|.+|.|+|+.. ....|..... ..
T Consensus 300 -----------------------------------------------g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v-~~ 331 (680)
T 1zlg_A 300 -----------------------------------------------IPVHHYKVFWSWMVSSKSLVPTKKKRRKTT-DG 331 (680)
T ss_pred -----------------------------------------------CceeEEEEEEEecccccccCCccceEEEEE-cC
Confidence 3466666666521 1124444332 24
Q ss_pred CccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc--cccccceec-----------cccC
Q psy8139 743 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR--ALHDTTALE-----------DEKP 809 (1101)
Q Consensus 743 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~--~~~~s~~~~-----------~w~p 809 (1101)
+.++++|.+|.|++.|.|+|.|.|..|.|++|.....+...+...++. |.++. ...++++.+ .|.+
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~-p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~ 410 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNN-KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGA 410 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCC-ccccccccccCccccccccccCCCccccccC
Confidence 568999999999999999999999999998877644344333233333 44443 333344433 7877
Q ss_pred CCCCCccccceeeeec---CcchhHHHHhHhhhceeeEEeeeeccCC---CCCCceeeeeccccccCCCCCCCCCccCcc
Q psy8139 810 RNTNNCDYESKRTFQS---TSPMLAAFMLLMLFTFIETISSFRDKYV---DNEDDYDIVETNEHTGTGAPSDNENESDYF 883 (1101)
Q Consensus 810 ~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~Y~v~~r~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~~t 883 (1101)
|...++ +..|...+. .+.+. .|.|.|+.... +..|..... .........+.+|.+++
T Consensus 411 P~~~~~-~~~y~v~w~~~~~~~v~------------~Y~V~w~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~L~p~t 473 (680)
T 1zlg_A 411 PFYQDG-QLQVKVYWKKTEDPTVN------------RYHVRWFPEACAHNRTTGSEASS----GMTHENYIILQDLSFSC 473 (680)
T ss_pred CcccCC-cceEEEEEeCCCCCccc------------eEEEEEeeeecccCCCCcceeee----eeccCceEEecCCCCCC
Confidence 643322 222212221 11123 67776654321 111211110 11222334455556999
Q ss_pred cce--eecccccccC--cee-----------------ecccCCCCcc-----CCCCC----Chhhhhhhhhhhccc---c
Q psy8139 884 PEK--TIDESVYGYD--TIV-----------------YGYDSDDLDR-----HYPTL----DEEEEEEDRESLVKD---R 930 (1101)
Q Consensus 884 ~Y~--V~a~n~~G~~--~~v-----------------~~~t~e~~P~-----~~P~~----v~~~~~~~n~t~v~v---p 930 (1101)
.|. |+|.|..|.+ ... +..+.+..|. .+|.+ +.+... +++ |.| |
T Consensus 474 ~Y~~~V~A~n~~G~s~~~~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v~~~--~~t-i~lsW~p 550 (680)
T 1zlg_A 474 KYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDV--NIT-GHFSWKM 550 (680)
T ss_pred eEEEEEEEecCCCCCCccccceeCCCccccccCCccccccCCCCccccccccCCccccceeEEEecc--Cce-EEEEecC
Confidence 999 9999999951 111 1111222233 68888 566665 444 555 4
Q ss_pred c-cccccchhhcccccchhhhhhcccccc----ccccc-----ccCCceeEeecCCCCCCCceeec-eeeechhhh
Q psy8139 931 E-SSVKGKEEEAKVIKDDEYYENLGDVLT----KKYSL-----PVNSDIQIKIDKPDDEPDYVIKG-KYEVDNEML 995 (1101)
Q Consensus 931 ~-~~~nG~i~gY~I~~~~~~y~~~~~~~~----~~~~l-----~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~ 995 (1101)
| ...||.|+||+| +|+...+... ....+ -.+....++|.+|.+++.|.|+. ++...+++-
T Consensus 551 P~~~~ng~I~gY~V-----~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~ 621 (680)
T 1zlg_A 551 AKANLYQPMTGFQV-----TWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGP 621 (680)
T ss_pred CCCCCCCCceeEEE-----EEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCC
Confidence 4 356999999999 8875532210 00000 11346689999999999999998 555555543
No 37
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.88 E-value=2e-21 Score=231.46 Aligned_cols=294 Identities=11% Similarity=0.064 Sum_probs=185.1
Q ss_pred hhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEe
Q psy8139 310 ADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRR 389 (1101)
Q Consensus 310 i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~ 389 (1101)
...+...|+|.|.|.|.|..|...+..+.+.+..+|..|..... ......++|.|.... +.+...+ .|..
T Consensus 195 ~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~p~~~~-----v~~G~~v~L~C~~~~---g~p~p~i--~W~k 264 (527)
T 3qs9_E 195 EKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLF-----LKVGEPLWIRCKAVH---VNHGFGL--TWEL 264 (527)
T ss_dssp CSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCCSCCEEE-----ECTTSCEEEEEEEEE---SSSCCCE--EEEC
T ss_pred eeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCccCCCceE-----EeCCCeEEEEEEEcc---CCCCeEE--EEEE
Confidence 33455789999999999999887765577777666654332222 122445666665420 1111111 1111
Q ss_pred cCCC----ceEE-----cCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecC-
Q psy8139 390 TGSP----YWVR-----ASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRAL- 459 (1101)
Q Consensus 390 ~~~~----~w~~-----~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p- 459 (1101)
.+.. .... ..........|.|.+++..|+|.|+|.|.|. . +..+.+.+. .+|.+...+
T Consensus 265 ~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~-----~~~~~L~V~----~~p~i~~~~~ 332 (527)
T 3qs9_E 265 ENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---P-----SQSALVTIV----EKGFINATNS 332 (527)
T ss_dssp SSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---E-----EEEEEEEEC------CEEECCCS
T ss_pred CCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---C-----CceEEEEEE----ccCccccccC
Confidence 1110 0100 0001122346999999999999999999987 1 233555543 345444333
Q ss_pred -ceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEE
Q psy8139 460 -HDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKA 538 (1101)
Q Consensus 460 -~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~ 538 (1101)
..+.+..|+++.|.|.+.|.|.|.++|+++|..+....... .....|.|.++...|+|.|+|.|.|..|....++
T Consensus 333 ~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~ 408 (527)
T 3qs9_E 333 SEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMF 408 (527)
T ss_dssp CCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEE
T ss_pred cccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEE
Confidence 34667889999999999999999999999999887654321 1234899999999999999999999999999999
Q ss_pred EEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCC-CC-----ceE-----EEeecceEEEE
Q psy8139 539 RLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTS-GG-----RYE-----ITHTDRYLNLR 607 (1101)
Q Consensus 539 ~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~-~~-----~~~-----~~~~~~~~sl~ 607 (1101)
.|.|..+|.+...+. | ..|.|.+.|.|.|.+.|++++..... .. .+. ...........
T Consensus 409 ~L~V~~~P~i~~~~~---------~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 477 (527)
T 3qs9_E 409 TLNIRRKPQVLAEAS---------A--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSST 477 (527)
T ss_dssp EEC--CCCEEEECCC---------C--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEE
T ss_pred EEEEecCCeEEEeCC---------C--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEE
Confidence 999999998754432 2 24799999999999999987654311 00 000 00111112233
Q ss_pred EccCCCCCCeEEEEEEEeCCCCceeEEEEEEec
Q psy8139 608 ISDARRADRGEYQAHGVNSLGEDVASFLVTVTD 640 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~ 640 (1101)
+.-....|.|.|+|.|.|..|.......|.|.+
T Consensus 478 L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~ 510 (527)
T 3qs9_E 478 LNMSEAIKGFLVKCCAYNSLGTSCETILLNSPG 510 (527)
T ss_dssp CCCCCSSCSCEEEEEEECSSCEEEEEEEC----
T ss_pred EEEEEcCCCEEEEEEEEeCCCCceeEEEEecCC
Confidence 333334599999999999999998888886653
No 38
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.87 E-value=1.8e-21 Score=225.47 Aligned_cols=300 Identities=21% Similarity=0.276 Sum_probs=215.2
Q ss_pred ccceEEEcCc-----cCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEec
Q psy8139 404 EDTELMVSGL-----EPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEG 478 (1101)
Q Consensus 404 ~~~~l~i~~L-----~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g 478 (1101)
.++++.|.++ +..|+|.|+|.|.|..+.... +..+.+.+. .+|.+...+....+..|+++.|.|.+.+
T Consensus 75 ~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~---s~~~~l~v~----~p~~~~~~~~~~~~~~G~~v~l~C~~~~ 147 (403)
T 3laf_A 75 PNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSII---SRTAKVMVA----GPLRFLSQTESITAFMGDTVLLKCEVIG 147 (403)
T ss_dssp TTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEE---CCCEEEEEC----CCCEECSCCCCEEEETTSCEEECCCEEC
T ss_pred cCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEE---EEEEEEEec----CCCccccCCCcEEEEcCCeEEEEEEEcc
Confidence 3456778777 778999999999975443321 233555543 4677777888889999999999999999
Q ss_pred cCCCeEEEEECCEEeec---CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE-EEEEEeeccCCccccCC--
Q psy8139 479 IPTPKVSWYKDGFEIFS---SRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI-TKARLRLEAPPTIRLPK-- 552 (1101)
Q Consensus 479 ~p~~~v~W~~~g~~~~~---~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~-~s~~l~V~~~p~~~~~~-- 552 (1101)
.|.+.+.|++++..+.. ....... .. ..|.|.++...|+|.|+|.|.|..|... ....+.|..+|....++
T Consensus 148 ~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~--~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~ 224 (403)
T 3laf_A 148 DPMPTIHWQKNQQDLNPIPGDSRVVVL-PS--GALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYF 224 (403)
T ss_dssp SSCCEEEEEESSSBCCCCTTCCSEEEC-TT--SCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEE
T ss_pred cCCCeEEEEECCEeccccCCceEEEEc-CC--ceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceE
Confidence 99999999999887642 2222222 22 3799999999999999999999887644 35677777666432211
Q ss_pred -CCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCc-eEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 553 -QYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGR-YEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 553 -~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~-~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
..+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... +... ....|.|.++...|.|.|+|.|.|..|..
T Consensus 225 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 301 (403)
T 3laf_A 225 LQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLL---GGSNLLISNVTDDDSGTYTCVVTYKNENI 301 (403)
T ss_dssp EECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEE---TTTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEEC---CccEEEEeCCCHHHCEEEEEEEEcCCCce
Confidence 122345678899999999999999999999999988865432 3222 24579999999999999999999999988
Q ss_pred eeEEEEEEecCC---CCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEE
Q psy8139 631 VASFLVTVTDRP---LPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIR 707 (1101)
Q Consensus 631 ~~s~~l~v~~~P---~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~ 707 (1101)
..+..+.|..+| ..|.+ .....+..++|+|...+. ....+.
T Consensus 302 ~~~~~l~V~~~p~~~~~~~~--~~~~~g~~v~l~C~~~g~----------------------------------p~p~v~ 345 (403)
T 3laf_A 302 SASAELTVLVPPWFLNHPSN--LYAYESMDIEFECAVSGK----------------------------------PVPTVN 345 (403)
T ss_dssp EEEEEEEEEEEEEEEECCCC--EECCTTCCEEECCEEEEE----------------------------------SCCEEE
T ss_pred EEEEEEEEECCCcEeecCcc--eEEecCCeEEEEEEEeec----------------------------------cCCEEE
Confidence 888888888665 22333 234457788888875221 112467
Q ss_pred eeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 708 WEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 708 W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
|.... ..+ ..+.. ... .....++|.++.......|.|.|.|..|.
T Consensus 346 W~~~g----~~~---------~~~~~-~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 390 (403)
T 3laf_A 346 WMKNG----DVV---------IPSDY-FQI----VGGSNLRILGVVKSDEGFYQCVAENEAGN 390 (403)
T ss_dssp EEETT----EEC---------CCSSS-EEE----ETTTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEECC----EEC---------CCCCc-EEE----ecCccEEEeccccccCEEEEEEEEcCCce
Confidence 76421 111 00001 111 23457899999999999999999999997
No 39
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.87 E-value=9.8e-21 Score=211.77 Aligned_cols=270 Identities=15% Similarity=0.161 Sum_probs=180.4
Q ss_pred CeeeecCceeEEccCCeEEEEEEEeccC-CCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVEGIP-TPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~g~p-~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
|.+...+..+.+..|++++|.|.+.+.+ .+.|.|++++..+.... ......+ +.|.|.++...|+|.|+|. ..
T Consensus 7 ~~~~~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~-~~~~~~~--~~L~i~~v~~~d~G~Y~C~---~~ 80 (325)
T 1n26_A 7 PAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHP-SRWAGMG--RRLLLRSVQLHDSGNYSCY---RA 80 (325)
T ss_dssp CCCCCCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCC-EEEEEES--SEEEECSCCGGGCEEEEEE---SS
T ss_pred CccccCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccc-ccccccc--ceEEecccchhhCeEeEEE---eC
Confidence 3444445555568999999999988755 78999999776542211 1222223 3899999999999999999 36
Q ss_pred CceEEEEEEeeccCCccccCCCCCCCeEEe-eCCEEEEEEEEeecC----CC--eeEEEEC-CeecCCCCceE--E--Ee
Q psy8139 532 GHSITKARLRLEAPPTIRLPKQYEDGLLFE-MGEIIKLKVSMAGMP----PP--TARWLHN-GEPLTSGGRYE--I--TH 599 (1101)
Q Consensus 532 g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~-~g~~~~l~c~~~g~p----~~--~v~W~~~-g~~l~~~~~~~--~--~~ 599 (1101)
|.....+.|.|..+|..+. +... .+....+.|.+.... .. .+.+.+. +.. ...+. . ..
T Consensus 81 g~~~~~~~L~V~~pP~~P~-------l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~---~~~~~~~c~~~~ 150 (325)
T 1n26_A 81 GRPAGTVHLLVDVPPEEPQ-------LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSP---AEDFQEPCQYSQ 150 (325)
T ss_dssp SSCSCEEEEEECCCCCCCC-------CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSS---CEEEEEEEEEET
T ss_pred CEEeeeEEEEeccCCCCCc-------eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCC---CCcccccCCCCC
Confidence 7777789999988774321 2222 233335666665221 11 2222221 100 00111 0 01
Q ss_pred ecceEEEEEccCC-CCCCeEEEEEEEeCCCCcee-EEEEEE--ecCCCCCCccEEEEecC--CeEEEEeecCCCCCCccc
Q psy8139 600 TDRYLNLRISDAR-RADRGEYQAHGVNSLGEDVA-SFLVTV--TDRPLPPGKAKVVMTLG--KSVTLSWSEPEDDGGCKI 673 (1101)
Q Consensus 600 ~~~~~sl~i~~l~-~~~~y~y~c~A~N~~G~~~~-s~~l~v--~~~P~~P~~~~~~~~~~--~sv~lsW~~p~~~~g~~i 673 (1101)
.....++.|..+. +.+.|.|+|.|.|..|.+.. ...+.+ ...|+||.++.+....+ +++.|+|++|..
T Consensus 151 ~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~------ 224 (325)
T 1n26_A 151 ESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHS------ 224 (325)
T ss_dssp TTTEEEEEECCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTT------
T ss_pred CCCCEEEEECCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCc------
Confidence 2335677888775 67899999999999998642 222222 24588888877766543 466666665432
Q ss_pred ceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCC
Q psy8139 674 GNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLE 753 (1101)
Q Consensus 674 ~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 753 (1101)
.++++.+++|.|+|+..+...|..+... ...++++|.+|.
T Consensus 225 ---------------------------------------~~~~~~~~~Y~V~yr~~~~~~W~~~~~~-~~~~~~~l~~L~ 264 (325)
T 1n26_A 225 ---------------------------------------WNSSFYRLRFELRYRAERSKTFTTWMVK-DLQHHCVIHDAW 264 (325)
T ss_dssp ---------------------------------------CCCSSSCEEEEEEEEETTCSCCEEEECG-GGCSEEEESSCC
T ss_pred ---------------------------------------cCCCcEeEEEEEEEEeCCCCCCEEEccc-CCceEEEEeCCC
Confidence 1234568999999999888889876542 456899999999
Q ss_pred CCceEEEEEEEEcCCccCCCCCCCCcEEecC
Q psy8139 754 PGWRYQFRITAENVVGFSEPGPLSEPLTVTY 784 (1101)
Q Consensus 754 p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~ 784 (1101)
|++.|.|+|+|.|..|.|.+|+++..+..++
T Consensus 265 p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 265 SGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp TTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 9999999999999999999999999887753
No 40
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.87 E-value=4.5e-21 Score=212.53 Aligned_cols=266 Identities=10% Similarity=0.026 Sum_probs=184.5
Q ss_pred eEEeeCCEEEEEEEEeec-------CCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 558 LLFEMGEIIKLKVSMAGM-------PPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 558 ~~v~~g~~~~l~c~~~g~-------p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
..+..|++++|.|.+.+. |.+.+.|.++|..+..+ ++.+. .+..++|.|.++... .|.|+|.|.|. |..
T Consensus 14 ~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~-~g~Y~C~a~~~-g~~ 89 (303)
T 1i1r_A 14 PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASL-NIQLTCNILTF-GQL 89 (303)
T ss_dssp CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCS-EEEEEEEEEET-TTE
T ss_pred ceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCC-ceEEEEecccC-CCc
Confidence 478889999999999964 78999999999988643 44443 334678999999987 59999999884 433
Q ss_pred ---eeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEE
Q psy8139 631 ---VASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIR 707 (1101)
Q Consensus 631 ---~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~ 707 (1101)
.....+.+..+|++|.++.+.....++++|+|.+|.+.+
T Consensus 90 ~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~-------------------------------------- 131 (303)
T 1i1r_A 90 EQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH-------------------------------------- 131 (303)
T ss_dssp EEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCS--------------------------------------
T ss_pred ceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCC--------------------------------------
Confidence 234567788899999999888777788888888664322
Q ss_pred eeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCC-CCCceEEEEEEEEcCCccCCCCCCCCcEEecCCC
Q psy8139 708 WEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGL-EPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR 786 (1101)
Q Consensus 708 W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~ 786 (1101)
.+++|.|+|+..+...|.. .......++++|.+| .|++.|.|+|.|.|..|.|.+++ ........
T Consensus 132 ----------~~~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~---~~~~~~~~ 197 (303)
T 1i1r_A 132 ----------LETNFTLKSEWATHKFADC-KAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDH---INFDPVYK 197 (303)
T ss_dssp ----------SCCEEEEEEEETTEECCCE-ECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCC---EEECGGGG
T ss_pred ----------CCcCEEEEEEecCCCCccC-CCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcccCC---EEECHHHe
Confidence 2456777776554333322 222356789999999 99999999999999999975432 22222224
Q ss_pred CCCCCCccccc----ccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeee
Q psy8139 787 SPAAAPSFIRA----LHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIV 862 (1101)
Q Consensus 787 ~P~~~p~~~~~----~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v 862 (1101)
.++.||.++.. ..++++.+.|.||.. .+++++ .|.|.|+..+ +..|....+
T Consensus 198 ~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~------------~~~~i~------------~Y~v~y~~~~-~~~w~~~~~ 252 (303)
T 1i1r_A 198 VKPNPPHNLSVINSEELSSILKLTWTNPSI------------KSVIIL------------KYNIQYRTKD-ASTWSQIPP 252 (303)
T ss_dssp EECCCCEEEEEECCSSSSSCEEEEEECCGG------------GGTSCE------------EEEEEEEETT-CSSCEECCG
T ss_pred EecCCCcceEEEEecCCCCEEEEEECCCCC------------CCcccE------------EEEEEEEeCC-CCCceEEcc
Confidence 57778877652 245678888987432 234566 9999999876 456765432
Q ss_pred eccccccCCCCCCCCCccCcccce--eeccccccc------CceeecccCCC
Q psy8139 863 ETNEHTGTGAPSDNENESDYFPEK--TIDESVYGY------DTIVYGYDSDD 906 (1101)
Q Consensus 863 ~~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~------~~~v~~~t~e~ 906 (1101)
.. .........+.+|.+++.|+ |+|.|..|. +..+...|.|+
T Consensus 253 ~~--~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e~ 302 (303)
T 1i1r_A 253 ED--TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 302 (303)
T ss_dssp GG--GCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCCC
T ss_pred cc--CCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCcC
Confidence 10 01112223344455999999 999999885 45666666654
No 41
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.87 E-value=2.7e-21 Score=214.57 Aligned_cols=221 Identities=23% Similarity=0.331 Sum_probs=168.1
Q ss_pred ceEEEcCccC-CccEEEEEEEEecCCCCCCCCCCcceEEEeccC---CCCCCeeeecCceeEEccCCeEEEEEEEeccCC
Q psy8139 406 TELMVSGLEP-GWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS---PAAAPSFIRALHDTTALEDEKVEFTVQVEGIPT 481 (1101)
Q Consensus 406 ~~l~i~~L~p-~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~---~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~ 481 (1101)
..|.|.++.. .|.|.|+|.|.|..|... ..+.+.+... +...|.+...|....+..|+++.|.|.+.|.|.
T Consensus 63 ~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~-----~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~ 137 (304)
T 2yd9_A 63 AVLRIQPLRTPRDENVYECVAQNSVGEIT-----VHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPD 137 (304)
T ss_dssp EEEEECSCCTTTTCSEEEEEEECSSCEEC-----CEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSC
T ss_pred eEEEEecccccCCCeEEEEEEECCCCeEE-----EEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCC
Confidence 5799999997 999999999999887632 3345555432 223477888888889999999999999999999
Q ss_pred CeEEEEECCEEeecCC---cEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEE-EEEeec---cCCccccCCCC
Q psy8139 482 PKVSWYKDGFEIFSSR---RQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITK-ARLRLE---APPTIRLPKQY 554 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~~---~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s-~~l~V~---~~p~~~~~~~~ 554 (1101)
+.+.|++++..+.... ++... .. ..|.|.++...|+|.|+|.|.|..|..... ..+.|. .+|.+...+.
T Consensus 138 ~~v~W~k~~~~~~~~~~~~~~~~~-~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~- 213 (304)
T 2yd9_A 138 PEITWFKDFLPVDPSASNGRIKQL-RS--GALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPM- 213 (304)
T ss_dssp CEEEEEETTEECCGGGGTTSEEEC-TT--SCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCC-
T ss_pred CeEEEEECCEECcCCCCcceEEeC-CC--eEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCC-
Confidence 9999999999876542 22222 22 289999999999999999999999876643 455553 3555554433
Q ss_pred CCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEE
Q psy8139 555 EDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASF 634 (1101)
Q Consensus 555 ~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~ 634 (1101)
...+..|+.+.|.|.+.|.|.|.+.|+++|..+.....+. .+...|.+.++ .|.|.|+|.|.|..|....++
T Consensus 214 --~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~ 285 (304)
T 2yd9_A 214 --SHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVA 285 (304)
T ss_dssp --CBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEE
T ss_pred --ceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEE
Confidence 2357789999999999999999999999999887654322 23456777776 589999999999999998898
Q ss_pred EEEEecCCC
Q psy8139 635 LVTVTDRPL 643 (1101)
Q Consensus 635 ~l~v~~~P~ 643 (1101)
.|.|..+|.
T Consensus 286 ~l~V~~~~~ 294 (304)
T 2yd9_A 286 QITVKSLPK 294 (304)
T ss_dssp EEC------
T ss_pred EEEEecCcc
Confidence 898886654
No 42
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.87 E-value=4.4e-21 Score=219.86 Aligned_cols=290 Identities=12% Similarity=0.004 Sum_probs=200.2
Q ss_pred EeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeE
Q psy8139 598 THTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYI 677 (1101)
Q Consensus 598 ~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~ 677 (1101)
.......++.|.+|.+++.|.|+|.|.|..|.+...........| +|.++.+...+.+++.|+|.+|.
T Consensus 53 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p-~p~~l~~~~~~~~si~l~W~~~~----------- 120 (375)
T 3t1w_A 53 VVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVP-QLTDLSFVDITDSSIGLRWTPLN----------- 120 (375)
T ss_dssp EEETTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCC-CCSCCEEECCCSSEEEEECCCCC-----------
T ss_pred EcCCCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCC-CCceEEEEecCCCeEEEEEECCC-----------
Confidence 344557889999999999999999999988876655444444444 47788877777777777777542
Q ss_pred EEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCce
Q psy8139 678 VEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWR 757 (1101)
Q Consensus 678 v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 757 (1101)
++++.+|.|+|...+...+..........++++|.+|.|++.
T Consensus 121 --------------------------------------~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 162 (375)
T 3t1w_A 121 --------------------------------------SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGID 162 (375)
T ss_dssp --------------------------------------CTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCE
T ss_pred --------------------------------------CCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCE
Confidence 135788888888766543322222236778999999999999
Q ss_pred EEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHh
Q psy8139 758 YQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFML 835 (1101)
Q Consensus 758 Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v 835 (1101)
|.|+|.|.|..|.|+++. ....+ .|+ +|.++. ....+++.+.|.+|. ++.+.
T Consensus 163 Y~~~V~a~~~~g~s~~s~---~~~~t---~~~-~p~~l~~~~~~~~si~l~W~~p~--------------~~~i~----- 216 (375)
T 3t1w_A 163 YDISVITLINGGESAPTT---LTQQT---AVP-PPTDLRFTNIGPDTMRVTWAPPP--------------SIDLT----- 216 (375)
T ss_dssp EEEEEEEEETTEECCCEE---EEEEC---CCC-CCEEEEEESCCSSCEEEEEECCS--------------SCCCC-----
T ss_pred EEEEEEEEeCCcccCCee---eeeec---CCC-CCceeEEEecccCEEEEEEcCCC--------------CCCcc-----
Confidence 999999999999977653 33332 333 454544 456677888897742 13455
Q ss_pred HhhhceeeEEeeeeccCCCCCCceeeeeccccccCCCCCCCCCccCcccce--eeccccccc--CceeecccCCCCccCC
Q psy8139 836 LMLFTFIETISSFRDKYVDNEDDYDIVETNEHTGTGAPSDNENESDYFPEK--TIDESVYGY--DTIVYGYDSDDLDRHY 911 (1101)
Q Consensus 836 ~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~--~~~v~~~t~e~~P~~~ 911 (1101)
.|.|.|+..+....|....+.. ......+.+|.+.+.|. |+|.|..|. +......| +..+
T Consensus 217 -------~Y~v~~~~~~~~~~~~~~~~~~-----~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t----~p~~ 280 (375)
T 3t1w_A 217 -------NFLVRYSPVKNEEDVAELSISP-----SDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKT----GLDS 280 (375)
T ss_dssp -------EEEEEEEEGGGTTCCEEEEECT-----TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC----CCCC
T ss_pred -------EEEEEEEeCCCCCCcEEEEcCC-----CcCEEEeCCCCCCCEEEEEEEEEcCCCcCCceeeEEec----CCCC
Confidence 8999998877666666655533 12223344455999999 999999987 44444444 3357
Q ss_pred CCCChhhhhhhhhhhccccccccccchhhcccccchhhhhhcccccccccccccCCceeEeecCCCCCCCceeec
Q psy8139 912 PTLDEEEEEEDRESLVKDRESSVKGKEEEAKVIKDDEYYENLGDVLTKKYSLPVNSDIQIKIDKPDDEPDYVIKG 986 (1101)
Q Consensus 912 P~~v~~~~~~~n~t~v~vp~~~~nG~i~gY~I~~~~~~y~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 986 (1101)
|.++.+... +.+++.|-+..++|.|.+|.| +|+..++........-......++|.+|.+|+.|.|+.
T Consensus 281 P~~l~~~~~--~~~sv~l~W~~p~~~~~~Y~v-----~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 348 (375)
T 3t1w_A 281 PTGIDFSDI--TANSFTVHWIAPRATITGYRI-----RHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSI 348 (375)
T ss_dssp CEEEEEESC--CSSCEEEEEECCSSCCSEEEE-----EEEETTCCSSCEEEEEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCccEeeec--cCCEEEEEECCCCcceeeEEE-----EEEECCCCCcceeEEcCCCccEEEECCCCCCCEEEEEE
Confidence 889998777 556666643334689999999 88777652221111223456688999999999999988
No 43
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.87 E-value=3.2e-21 Score=223.47 Aligned_cols=236 Identities=15% Similarity=0.170 Sum_probs=154.7
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVS 485 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~ 485 (1101)
.+|.|.++++.|+|.|+|.|.|..|... ..+.+.+. .+|.+.. .....+..|..+.|.|.+.|.|.|.|+
T Consensus 103 ~sL~I~~v~~~D~G~Y~C~a~N~~g~~~-----~~~~l~V~----~~p~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~ 172 (423)
T 3qs7_E 103 VSMVILKMTETQAGEYLLFIQSEATNYT-----ILFTVSIR----NTLLYTL-RRPYFRKMENQDALVCISESVPEPIVE 172 (423)
T ss_dssp EEEEESSCCSSSCSEEEEEEEC--CEEE-----EEEEEEEC---------CE-EEEEEEECSSSSCEEEEEEESSCCEEE
T ss_pred EEEEEeecCcccCEEEEEEEEcCCCcEE-----EEEEEEEe----cCccccc-cCCcEeccCCceEEEEEEeeecCCeEE
Confidence 3689999999999999999999877542 33555554 2333321 112234568888999999999999999
Q ss_pred EEECCEEeecCCcEEEEecCCeeEEEE-eecCCCCCEEEEEEEEeCCCceEEE-EEEeeccCCccccCCCCCCCeEEeeC
Q psy8139 486 WYKDGFEIFSSRRQRIVTDNDISTLII-HQAALMDEGEIKCTATNRAGHSITK-ARLRLEAPPTIRLPKQYEDGLLFEMG 563 (1101)
Q Consensus 486 W~~~g~~~~~~~~~~~~~~~~~~~l~I-~~l~~~d~g~Y~C~a~n~~g~~~~s-~~l~V~~~p~~~~~~~~~~~~~v~~g 563 (1101)
|++++..+..... .. ... .... .-+...|+|.|+|.|.|..|..... ..|.|..+|.... ....+..|
T Consensus 173 W~k~~~~~~~~~~-~~--~~~--~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~-----~~~~v~~G 242 (423)
T 3qs7_E 173 WVLCDSQGESCKE-ES--PAV--VKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTL-----PQLFLKVG 242 (423)
T ss_dssp EEEC----------------C--EEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSST-----TEEEEETT
T ss_pred EEECCCCCccccc-cc--ccc--ccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCccCC-----CceEEeCC
Confidence 9998875432100 00 000 0000 1125789999999999999986553 6777777665521 24578899
Q ss_pred CEEEEEEEEee-cCCCeeEEEECCeecCCCCceEEE-e-----ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 564 EIIKLKVSMAG-MPPPTARWLHNGEPLTSGGRYEIT-H-----TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 564 ~~~~l~c~~~g-~p~~~v~W~~~g~~l~~~~~~~~~-~-----~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
+.+.|.|.+.| .|.+.+.|+++|..+.....+... . .....+|.|.++...|.|.|+|.|.|. ...++.|
T Consensus 243 ~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L 319 (423)
T 3qs7_E 243 EPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALV 319 (423)
T ss_dssp SCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEE
T ss_pred CeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEE
Confidence 99999999999 677999999999887654222111 0 112457999999999999999999998 6677788
Q ss_pred EEecCCCC---CCccEEEEecCCeEEEEeec
Q psy8139 637 TVTDRPLP---PGKAKVVMTLGKSVTLSWSE 664 (1101)
Q Consensus 637 ~v~~~P~~---P~~~~~~~~~~~sv~lsW~~ 664 (1101)
.|..+|.. |....+....+.++.|.|..
T Consensus 320 ~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~ 350 (423)
T 3qs7_E 320 TIVEKGFINATNSSEDYEIDQYEEFCFSVRF 350 (423)
T ss_dssp EEESSCEEEEC---CEECCCTTCCCCEEEEE
T ss_pred EEEeCCcceEcCCCccEEecCCCeEEEEEEE
Confidence 88866531 22223334456777888875
No 44
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.86 E-value=7.7e-21 Score=209.40 Aligned_cols=224 Identities=21% Similarity=0.302 Sum_probs=174.2
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
...|.|.+++..|+|.|+|.|.|..|... +..+.+.+. .+|.+...|....+..|+++.|.|.+.+.|.+.+
T Consensus 61 ~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~----~~~~~l~v~----~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v 132 (291)
T 1qz1_A 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQS----EATVNVKIF----QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTI 132 (291)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTSCEE----EEEEEEEEE----CCSEEEECCSSEEEETTSCEEECCEEECSSCCEE
T ss_pred eEEEEEecCCCCCCEEEEEEEEcCCCCee----EEEEEEEee----ccccccCCCCcccccCCCeEEEEEEeccCCCCEE
Confidence 46899999999999999999999886421 233455543 5677888888889999999999999999999999
Q ss_pred EEEECCEEeecC--CcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE--EEEEEeeccCCccccCCCCCCCeEE
Q psy8139 485 SWYKDGFEIFSS--RRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI--TKARLRLEAPPTIRLPKQYEDGLLF 560 (1101)
Q Consensus 485 ~W~~~g~~~~~~--~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~--~s~~l~V~~~p~~~~~~~~~~~~~v 560 (1101)
.|++++..+... .++... .+ ..|.|.++...|+|.|+|.|.|..+... ....|.|..+|.+...+.. ....+
T Consensus 133 ~W~~~~~~~~~~~~~~~~~~-~~--~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~ 208 (291)
T 1qz1_A 133 IWKHKGRDVILKKDVRFIVL-SN--NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSI-VNATA 208 (291)
T ss_dssp EEEETTSCSSTTCCTTEEEC-TT--SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSE-EEEET
T ss_pred EEEECCEEcccCCCceEEEc-cC--CcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccc-ccccc
Confidence 999998876533 233322 22 2799999999999999999999765433 3466777777766543221 12355
Q ss_pred eeCCEEEEEEEEeecCCCeeEEEECCeecCCCCc--eEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 561 EMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGR--YEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 561 ~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~--~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
..|+.+.|.|.+.|.|.|.+.|+++|..+..... ...........|.|.++...|.|.|+|.|.|..|....+..|.|
T Consensus 209 ~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 288 (291)
T 1qz1_A 209 NLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKV 288 (291)
T ss_dssp TSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEE
Confidence 6799999999999999999999999998876531 12223344578999999999999999999999999888888887
Q ss_pred ec
Q psy8139 639 TD 640 (1101)
Q Consensus 639 ~~ 640 (1101)
..
T Consensus 289 ~~ 290 (291)
T 1qz1_A 289 FA 290 (291)
T ss_dssp EC
T ss_pred Ec
Confidence 63
No 45
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.86 E-value=7.3e-21 Score=209.59 Aligned_cols=223 Identities=21% Similarity=0.351 Sum_probs=171.8
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVS 485 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~ 485 (1101)
..|.|.+++..|.|.|+|.|.|..|... +..+.+.+. .+|.+...+....+..|+++.|.|.+.+.|.+.+.
T Consensus 60 ~~L~i~~~~~~D~G~Y~C~~~n~~g~~~----~~~~~l~v~----~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~ 131 (291)
T 2wim_A 60 SRLTIYNANIEDAGIYRCQATDAKGQTQ----EATVVLEIY----QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVS 131 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSSCEE----EEEEEEEEE----CCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEE
T ss_pred EEEEEccCCcccCEEEEEEEecccCceE----EEEEEEEec----CCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEE
Confidence 5799999999999999999999877542 233444443 45666666777889999999999999999999999
Q ss_pred EEECCEEeec--CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE--EEEEEeeccCCccccCCCCCCCeEEe
Q psy8139 486 WYKDGFEIFS--SRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI--TKARLRLEAPPTIRLPKQYEDGLLFE 561 (1101)
Q Consensus 486 W~~~g~~~~~--~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~--~s~~l~V~~~p~~~~~~~~~~~~~v~ 561 (1101)
|++++..+.. ..++..... ..|.|.++...|+|.|+|.+.|..+... ....+.|..+|.+..++.. ....+.
T Consensus 132 W~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~-~~~~~~ 207 (291)
T 2wim_A 132 WLYHNEEVTTISDNRFAMLAN---NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKS-FNATAE 207 (291)
T ss_dssp EECC----CBCCCSSEEECTT---SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSE-EECCSS
T ss_pred EEECCccccccCCceEEEccC---CCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCccc-ccceec
Confidence 9999987764 333433322 2799999999999999999999876543 3456777778876544321 122456
Q ss_pred eCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC
Q psy8139 562 MGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDR 641 (1101)
Q Consensus 562 ~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~ 641 (1101)
.|+.+.|.|.+.|.|.+.+.|+++|..+..+..+.+. .....|.|.++...|.|.|+|.|.|..|....++.+.|..+
T Consensus 208 ~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~ 285 (291)
T 2wim_A 208 RGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQ 285 (291)
T ss_dssp SCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEEC--STTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC---
T ss_pred CCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEc--CCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEe
Confidence 7999999999999999999999999999877666543 33578999999999999999999999999999999998866
Q ss_pred C
Q psy8139 642 P 642 (1101)
Q Consensus 642 P 642 (1101)
+
T Consensus 286 ~ 286 (291)
T 2wim_A 286 H 286 (291)
T ss_dssp -
T ss_pred c
Confidence 4
No 46
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.85 E-value=5.6e-20 Score=211.79 Aligned_cols=293 Identities=18% Similarity=0.228 Sum_probs=206.6
Q ss_pred ccceEEEcCccCCc------cEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEe
Q psy8139 404 EDTELMVSGLEPGW------RYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVE 477 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d------~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~ 477 (1101)
.+++|.|.+++..| +|.|+|.|.|..|... +..+.+.+. .+|.+...+....+.+|++++|.|.+.
T Consensus 57 ~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~----s~~~~v~v~----~~p~~~~~~~~~~v~~G~~v~l~C~~~ 128 (388)
T 2v5m_A 57 SDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSII----SRDVHVRAV----VAQYYEADVNKEHVIRGNSAVIKCLIP 128 (388)
T ss_dssp STTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEE----CCCEEEEEE----CCCCCCCBCCCEEEETTSCEEECCBCC
T ss_pred CCceEEecccChhhccccccCceEEEEEEccCCeEE----ecceEEEEc----cccccccCccceeeecCCcEEEEEECc
Confidence 45689999999987 9999999999888532 233555543 345555667778899999999999998
Q ss_pred ccCC---CeEEEEECCEEeec-----CCcEEEEecCCeeEEEEeecCCCCC-EEEEEEEEeCCCceEE-E---EEEeecc
Q psy8139 478 GIPT---PKVSWYKDGFEIFS-----SRRQRIVTDNDISTLIIHQAALMDE-GEIKCTATNRAGHSIT-K---ARLRLEA 544 (1101)
Q Consensus 478 g~p~---~~v~W~~~g~~~~~-----~~~~~~~~~~~~~~l~I~~l~~~d~-g~Y~C~a~n~~g~~~~-s---~~l~V~~ 544 (1101)
+.+. +.+.|++++..+.. ..++.+... +.|.|.++...|+ |.|+|.+.|..+.... + ..|.|..
T Consensus 129 ~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~ 205 (388)
T 2v5m_A 129 SFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPS---GELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE 205 (388)
T ss_dssp TTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTT---SCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEEC
T ss_pred CCCCCCcceEEEEeCCCcccccccCCCCcEEEccC---CcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEec
Confidence 8654 68999999876532 233433322 2799999999999 9999999998654332 1 2456655
Q ss_pred CCccc---cCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecC------CCCceEEEeecceEEEEEccCCCCC
Q psy8139 545 PPTIR---LPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLT------SGGRYEITHTDRYLNLRISDARRAD 615 (1101)
Q Consensus 545 ~p~~~---~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~------~~~~~~~~~~~~~~sl~i~~l~~~~ 615 (1101)
++... .+........+..|+.+.|.|.+.|.|.+.+.|++++..+. ...++.. ....|.|.++...|
T Consensus 206 ~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d 281 (388)
T 2v5m_A 206 PISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ----VSGTLIIKDAVVED 281 (388)
T ss_dssp CCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE----ETTEEEESSCCGGG
T ss_pred CCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec----ccCEEEECcCCHHH
Confidence 42211 11112234567889999999999999999999999754332 1222221 24589999999999
Q ss_pred CeEEEEEEEeCCCCceeEEEEEEecCCCCCC-ccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccC
Q psy8139 616 RGEYQAHGVNSLGEDVASFLVTVTDRPLPPG-KAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLP 694 (1101)
Q Consensus 616 ~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~-~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~ 694 (1101)
.|.|+|.|.|..|.......|.|..+|.... ........+..+.|.|...+.
T Consensus 282 ~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~--------------------------- 334 (388)
T 2v5m_A 282 SGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGN--------------------------- 334 (388)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEE---------------------------
T ss_pred CeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccc---------------------------
Confidence 9999999999999888888888886653211 112344567788999985211
Q ss_pred CCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 695 DSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 695 ~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
....+.|... |.++ . .....++|.++.......|.|.|.|..|.
T Consensus 335 -------p~p~i~W~~~----g~~i------------------~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 378 (388)
T 2v5m_A 335 -------PIKTVSWMKD----GKAI------------------G---HSESVLRIESVKKEDKGMYQCFVRNDRES 378 (388)
T ss_dssp -------CCCEEEEEET----TEEC------------------S---CCSSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred -------cCCeEEEEEC----CEEC------------------c---cCCCEEEEecCChhhCEEEEEEEEcCCCc
Confidence 0124667532 1111 0 23467999999999999999999999996
No 47
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.85 E-value=1.2e-19 Score=218.04 Aligned_cols=254 Identities=14% Similarity=0.139 Sum_probs=173.5
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC--
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP-- 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~-- 482 (1101)
..+|.|.++++.|+|.|+|.|.|..|.... .+..+.+.+...+..+|.+...+....+..|+.+.|.|.+.|.|++
T Consensus 69 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~--~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~ 146 (523)
T 2rcj_C 69 SASLAISGLEAEDESDYYCASWNSSDNSYV--FGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAV 146 (523)
T ss_pred EEEEEECCCChhhCEEEEEEEccCCCcccc--ccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCce
Confidence 357999999999999999999998764211 1223455554444567877777777778889999999999998764
Q ss_pred eEEEEECCEEeecCCcEEEE--ecCC----eeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEee----ccCCccccCC
Q psy8139 483 KVSWYKDGFEIFSSRRQRIV--TDND----ISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRL----EAPPTIRLPK 552 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~--~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V----~~~p~~~~~~ 552 (1101)
.++|+++|..+......... ..++ .+.|.|.++...|+|.|+|.|.|..|.......+.+ ..+|.+...+
T Consensus 147 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~ 226 (523)
T 2rcj_C 147 TVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLA 226 (523)
T ss_pred EEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecC
Confidence 89999999877543222111 1111 136999999999999999999999887655554322 2344433111
Q ss_pred CCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEEECCeecCCCCceEEEeecc----eEEEEEccCCCCCCeEEEEEEEeC
Q psy8139 553 QYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWLHNGEPLTSGGRYEITHTDR----YLNLRISDARRADRGEYQAHGVNS 626 (1101)
Q Consensus 553 ~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~~~g~~l~~~~~~~~~~~~~----~~sl~i~~l~~~~~y~y~c~A~N~ 626 (1101)
. ...+..|+.+.|.|.+.|. |.+ .+.|+++|..+.......+...++ ...|.|.++...| |.|+|.|.|.
T Consensus 227 ~---~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~ 302 (523)
T 2rcj_C 227 P---SSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHK 302 (523)
T ss_pred C---CcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeC
Confidence 1 1245679999999999987 767 899999987754211111111111 3579999999999 9999999999
Q ss_pred CCCceeEEEEEEecCCC----CCCccEEEEecCCeEEEEeecC
Q psy8139 627 LGEDVASFLVTVTDRPL----PPGKAKVVMTLGKSVTLSWSEP 665 (1101)
Q Consensus 627 ~G~~~~s~~l~v~~~P~----~P~~~~~~~~~~~sv~lsW~~p 665 (1101)
.|.......+.+...|. +|.... ....+..+.|.|...
T Consensus 303 ~g~~~~~~~l~v~~~P~~~~~~p~~~~-~v~~g~~~~l~C~~~ 344 (523)
T 2rcj_C 303 PSNTKVDKRVEPLSLPSVFLFPPKPKD-TLMISRTPEVTCVVV 344 (523)
T ss_pred CCCcceEEecCCCcCceEEecCCCchh-hcccCCceEEEEEEe
Confidence 99876666665543331 121111 123467888888853
No 48
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.85 E-value=1.2e-19 Score=186.73 Aligned_cols=191 Identities=27% Similarity=0.490 Sum_probs=168.6
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.+...|.++.+..|+++.|.|.+.+.|.+.+.|++++..+.....+.+...+....|.|.++...|+|.|+|.+.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 35788888899999999999999999999999999999999999888888888778778999999999999999999999
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEc
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRIS 609 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~ 609 (1101)
..|.......|.|..+|.+...........+..|..+.|.|.+.+.|.+.+.|++++..+..+..+.+...+....|.|.
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 164 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMK 164 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEES
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEc
Confidence 99988888889998877665443344456778899999999999999999999999999988888887777667899999
Q ss_pred cCCC-CCCeEEEEEEEeCCCCceeEEEEEEec
Q psy8139 610 DARR-ADRGEYQAHGVNSLGEDVASFLVTVTD 640 (1101)
Q Consensus 610 ~l~~-~~~y~y~c~A~N~~G~~~~s~~l~v~~ 640 (1101)
++.. .|.|.|+|.|.|..|.......|.|.+
T Consensus 165 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 165 NVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9985 899999999999999988888888764
No 49
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.85 E-value=4.6e-21 Score=214.03 Aligned_cols=224 Identities=20% Similarity=0.281 Sum_probs=177.4
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEec-------
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEG------- 478 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g------- 478 (1101)
..|.|.+++..|+|.|+|.|.|..|.... .+.+.+. .+|.+...+....+..|+.+.|.|.+.+
T Consensus 61 ~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~-----~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~ 131 (317)
T 2y25_A 61 CTLLITEFSKKDAGIYEVILKDDRGKDKS-----RLKLVDE----AFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFV 131 (317)
T ss_dssp EEEEETTCCSTTCSCEEEEEESSSCEEEE-----EECCSTH----HHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEB
T ss_pred EEEEEccCCcccCeEEEEEEECCCCcEEE-----EEEEEEe----cCccccccCCceecccCCCeEEEeeccccEEEEEe
Confidence 58999999999999999999998875421 1222211 2233333344455667777888887766
Q ss_pred ---cCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeecc-----------
Q psy8139 479 ---IPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEA----------- 544 (1101)
Q Consensus 479 ---~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~----------- 544 (1101)
.|.+.+.|++++..+....++.....++...|.|.++...|+|.|+|.|.|..|....+..+.|..
T Consensus 132 ~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~ 211 (317)
T 2y25_A 132 TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRL 211 (317)
T ss_dssp SSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhccc
Confidence 789999999999988877778877777777899999999999999999999999888887777642
Q ss_pred ---------CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEee-cceEEEEEccCCCC
Q psy8139 545 ---------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHT-DRYLNLRISDARRA 614 (1101)
Q Consensus 545 ---------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~sl~i~~l~~~ 614 (1101)
+|.+.. ..+....+..|+.+.|.|.+.|.|.+.+.|+++|..+..+.++.+... +....|.|.++...
T Consensus 212 ~~~~~~~~~~p~~~~--~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 289 (317)
T 2y25_A 212 KQAAIAEKNRARVLG--GLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTA 289 (317)
T ss_dssp HHHHHHTTTSCEEEE--BCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCST
T ss_pred CCcccCcCCCCcccc--cCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHH
Confidence 121111 112345788999999999999999999999999999988777777665 55679999999999
Q ss_pred CCeEEEEEEEeCCCCceeEEEEEEec
Q psy8139 615 DRGEYQAHGVNSLGEDVASFLVTVTD 640 (1101)
Q Consensus 615 ~~y~y~c~A~N~~G~~~~s~~l~v~~ 640 (1101)
|.|.|+|.|.|..|....+..|.|..
T Consensus 290 d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 290 DSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp TCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred HCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 99999999999999998888888873
No 50
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.84 E-value=4.4e-21 Score=218.81 Aligned_cols=270 Identities=15% Similarity=0.067 Sum_probs=188.9
Q ss_pred hhhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEE
Q psy8139 304 KQAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGY 383 (1101)
Q Consensus 304 ~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y 383 (1101)
..+.|.|.++...|+|.|.|.+.|..+ .+.+.|...+.+|.. .+ ....+++|.|..... +...
T Consensus 65 ~~~~L~I~~v~~~D~G~Y~C~~~n~~~-----~~~l~V~~~~~~~~~-~v------~~G~~v~l~C~~~~~----p~~~- 127 (363)
T 1wio_A 65 GNFPLIIKNLKIEDSDTYICEVEDQKE-----EVQLLVFGLTANSDT-HL------LQGQSLTLTLESPPG----SSPS- 127 (363)
T ss_dssp TCCCEEECSCCGGGCEEEEEEETTEEE-----EEEEEEEEEEESSCS-SE------ESBSCEEEEEECCTT----CCCC-
T ss_pred CeEEEEECCCCHHHCEEEEEEEEECCC-----cEEEEEEeCCCCCce-EE------ecCCCEEEEEEcCCC----CCCe-
Confidence 356799999999999999999987754 244444433333332 11 234567888876421 1111
Q ss_pred EEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeE
Q psy8139 384 LVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTT 463 (1101)
Q Consensus 384 ~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~ 463 (1101)
+.|...+.. .......|.|.+++..|.|.|+|.|.|..+... ..+.+.+. .+|. .+....
T Consensus 128 -v~W~~~~~~-------~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~-----~~~~l~v~----~~p~---~~~~~~ 187 (363)
T 1wio_A 128 -VQCRSPRGK-------NIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVE-----FKIDIVVL----AFQK---ASSIVY 187 (363)
T ss_dssp -EEEECSSSC-------EEEESSEEEECSBCGGGCEECEEEEEETTEEEE-----ECCEECEE----CCSC---SEEEEE
T ss_pred -EEEEcCCCc-------ccccceEEEEeeCChhcCCEEEEEEecCCCeEE-----EEEEEEEe----cCCC---CCCceE
Confidence 222221111 112446899999999999999999998654322 22333333 2222 125667
Q ss_pred EccCCeEEEEEEEec-----cCCCeEEEEECCEEeec--------CCcEEEEe----------cCCeeEEEEeecCCCCC
Q psy8139 464 ALEDEKVEFTVQVEG-----IPTPKVSWYKDGFEIFS--------SRRQRIVT----------DNDISTLIIHQAALMDE 520 (1101)
Q Consensus 464 v~~g~~v~L~C~~~g-----~p~~~v~W~~~g~~~~~--------~~~~~~~~----------~~~~~~l~I~~l~~~d~ 520 (1101)
+.+|+.+.|.|.+.+ .|.|.++|+++|..+.. ...+.+.. .++...|.|.++...|+
T Consensus 188 ~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 267 (363)
T 1wio_A 188 KKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYA 267 (363)
T ss_dssp EETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGC
T ss_pred EecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcC
Confidence 889999999998877 78899999999987654 34444432 22344899999999999
Q ss_pred EEEEEEEEeC--CCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCe--eEEEECCeecCCCCceE
Q psy8139 521 GEIKCTATNR--AGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPT--ARWLHNGEPLTSGGRYE 596 (1101)
Q Consensus 521 g~Y~C~a~n~--~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~--v~W~~~g~~l~~~~~~~ 596 (1101)
|.|+|.|.|. .|.....+.|.|... .|.++.|.|.+.+.|.|. +.|++++..+..
T Consensus 268 G~Y~C~a~n~~~~g~~~~~~~l~V~~v----------------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~----- 326 (363)
T 1wio_A 268 GSGNLTLALEAKTGKLHQEVNLVVMRA----------------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV----- 326 (363)
T ss_dssp EEEEEEECBTTTTCCEEEEEEEEEEEE----------------CCCSSSEEEEEESSCCTTCCEEEECSSSSCSE-----
T ss_pred cEEEEEEEEhhhcCeEEEEEeEEEEEe----------------cCCCeeEEEEEccccCCCccEEEEeCCCceee-----
Confidence 9999999999 898888888888621 177788999999999888 999999977653
Q ss_pred EEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 597 ITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 597 ~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
...+.|.++...|.|.|+|.|.|. |....+..+.|
T Consensus 327 ------~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 327 ------SKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp ------EESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEE
T ss_pred ------eeeeeeeeeccccceeEEEEEecC-CeEEEecceEe
Confidence 334677889999999999999964 55555555555
No 51
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.84 E-value=4.7e-20 Score=211.92 Aligned_cols=296 Identities=20% Similarity=0.269 Sum_probs=200.1
Q ss_pred cceEEEcCc-cCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEe-ccCCC
Q psy8139 405 DTELMVSGL-EPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVE-GIPTP 482 (1101)
Q Consensus 405 ~~~l~i~~L-~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~-g~p~~ 482 (1101)
++++.|.+. ...|+|.|+|.|.|..|..... ...+.+... ++.....+..+.+..|+.+.|.|... +.|.+
T Consensus 61 ~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~----~~~l~v~~~---~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~ 133 (384)
T 3kld_A 61 DGSLLINNPNKTQDAGTYQCIATNSFGTIVSR----EAKLQFAYL---ENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL 133 (384)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEECC----CEEEEEEEE---CCCSCCCCCCEEEEETCCEEECCCCCSEESCE
T ss_pred CCEEEEcCCCCcccCEEEEEEEEcCcccEEec----ceEEEEecc---cccccCCCCceeEEcCCCeEEecCCCCCCCCe
Confidence 356777765 7899999999999998864322 233333211 11111223456788999999999764 56778
Q ss_pred eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEE---EEEeec-------cCCccccCC
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITK---ARLRLE-------APPTIRLPK 552 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s---~~l~V~-------~~p~~~~~~ 552 (1101)
.+.|++++.++....+..+.... ..|.|.++...|+|.|+|.|.|..|..... ..+.+. .+|.+..
T Consensus 134 ~~~W~~~~~~~~~~~~~~~~~~~--~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~-- 209 (384)
T 3kld_A 134 SYAWIFNEYPSYQDNRRFVSQET--GNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEV-- 209 (384)
T ss_dssp EEEEEETTEECCCSSSEEECTTT--CCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEE--
T ss_pred EEEEEECCCCCEeeccEEEEcCC--CcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceee--
Confidence 99999999887655444333222 379999999999999999999988764321 222221 1222221
Q ss_pred CCCCCeEEeeCCEEEEEEEEeecCCCeeEEEEC-CeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 553 QYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHN-GEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 553 ~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~-g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
..+....+..|+.+.|.|.+.|.|.|.+.|+++ +..+..... . ....+.|.|.++...|.|.|+|.|.|..|...
T Consensus 210 ~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 285 (384)
T 3kld_A 210 QFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR--R--HKSNGILEIPNFQQEDAGSYECVAENSRGKNV 285 (384)
T ss_dssp ECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCE--E--CTTSCEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccce--e--cCCCcEEEECCCChhhCEEEEEEEEcCCCeEE
Confidence 112345678899999999999999999999995 445543221 1 12356899999999999999999999999988
Q ss_pred eEEEEEEecCCC---CCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEe
Q psy8139 632 ASFLVTVTDRPL---PPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRW 708 (1101)
Q Consensus 632 ~s~~l~v~~~P~---~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W 708 (1101)
....+.|..+|. .|.+ .....+.++.|.|...+. ....+.|
T Consensus 286 ~~~~l~v~~~P~~~~~~~~--~~v~~g~~v~l~C~~~g~----------------------------------P~p~i~W 329 (384)
T 3kld_A 286 AKGQLTFYAQPNWVQIIND--IHVAMEESVFWECKANGR----------------------------------PKPTYRW 329 (384)
T ss_dssp EEEEEEEEEEEEEEECCCC--EEECTTCCEEEECEEEEE----------------------------------SCCEEEE
T ss_pred EEEEEEEecCCccccCCCc--eEecCCCCEEEEeECCcc----------------------------------CCCeEEE
Confidence 888888876653 2222 334567788888885321 1125678
Q ss_pred eCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 709 EPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 709 ~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
... |.++. .... .. .....+.|.++.+.+...|.|.|.|.+|.
T Consensus 330 ~k~----g~~l~---------~~~~-~~-----~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~ 372 (384)
T 3kld_A 330 LKN----GDPLL---------TRDR-IQ-----IEQGTLNITIVNLSDAGMYQCVAENKHGV 372 (384)
T ss_dssp EET----TEECC---------CBTT-EE-----EETTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEC----CEECC---------CCcc-EE-----EeCCEEEEeecChhhCEEEEEEEEeCCce
Confidence 642 11110 0001 11 12347899999999999999999999996
No 52
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.84 E-value=6.8e-20 Score=209.38 Aligned_cols=289 Identities=11% Similarity=0.052 Sum_probs=194.2
Q ss_pred EeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeE
Q psy8139 598 THTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYI 677 (1101)
Q Consensus 598 ~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~ 677 (1101)
.......++.+.+|.+++.|.|+|.|.|..|.+..... .+...|.+|.++.+...+.+++.|+|.+|.
T Consensus 52 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~-~~~~~~~~p~~l~~~~~~~~si~l~W~~p~----------- 119 (368)
T 1fnf_A 52 VVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISD-TIIPAVPPPTDLRFTNIGPDTMRVTWAPPP----------- 119 (368)
T ss_dssp EECTTCCEEECCCCCTTSCEEEEEEEEETTEECCCEEE-EECCCCCCCEEEEEESCCSSCEEEEEECCT-----------
T ss_pred EecCCcCEEEECCCCCCCEEEEEEEEEcCCCccCceee-eecCCCcCCceeEEEEcCCCeEEEEeeCCC-----------
Confidence 34455678999999999999999999999987655432 333444577777777667777777777542
Q ss_pred EEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCC-CceeecccccCccEEEEcCCCCCc
Q psy8139 678 VEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSP-YWVRASPHMVEDTELMVSGLEPGW 756 (1101)
Q Consensus 678 v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t 756 (1101)
++++.+|.|.|+..++. .|..... ....++++|.+|.|++
T Consensus 120 --------------------------------------~~~~~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t 160 (368)
T 1fnf_A 120 --------------------------------------SIDLTNFLVRYSPVKNEEDVAELSI-SPSDNAVVLTNLLPGT 160 (368)
T ss_dssp --------------------------------------TCCCSEEEEEEEETTCTTCCEEEEE-CTTCCEEEECSCCTTC
T ss_pred --------------------------------------CCCCcEEEEEEEECCCCCccEEEEc-CCCcceEEecCCCCCC
Confidence 13477888888876543 4544332 2577899999999999
Q ss_pred eEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHH
Q psy8139 757 RYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFM 834 (1101)
Q Consensus 757 ~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (1101)
.|.|+|.|.|..|.|.+ ..... ..++.+|.++. ...++++.+.|.++. +++.
T Consensus 161 ~Y~~~V~a~~~~g~s~~---~~~~~----~~~~~~P~~l~~~~~~~~sv~l~W~~p~---------------~~i~---- 214 (368)
T 1fnf_A 161 EYVVSVSSVYEQHESTP---LRGRQ----KTGLDSPTGIDFSDITANSFTVHWIAPR---------------ATIT---- 214 (368)
T ss_dssp EEEEEEEEEETTEECCC---EEEEE----ECCCCCCEEEEEESCCSSEEEEEEECCS---------------SCCS----
T ss_pred EEEEEEEEEeCCCCCCC---eEeee----cCCCCCCCccEEEEccCCEEEEEEeCCC---------------CCcC----
Confidence 99999999999998654 22222 23444555554 445677788897642 3445
Q ss_pred hHhhhceeeEEeeeeccCCCCCCceeeeeccccccCCCCCCCCCccCcccce--eecccccccCceeecccCCCCccCCC
Q psy8139 835 LLMLFTFIETISSFRDKYVDNEDDYDIVETNEHTGTGAPSDNENESDYFPEK--TIDESVYGYDTIVYGYDSDDLDRHYP 912 (1101)
Q Consensus 835 v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~~~~v~~~t~e~~P~~~P 912 (1101)
+|.|.|+..+....+....+.. ......+.+|.+.+.|. |+|.|..|.+..... ....+..+|
T Consensus 215 --------~Y~v~~~~~~~~~~~~~~~~~~-----~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~--~~~t~p~~P 279 (368)
T 1fnf_A 215 --------GYRIRHHPEHFSGRPREDRVPH-----SRNSITLTNLTPGTEYVVSIVALNGREESPLLIG--QQSTVSDVP 279 (368)
T ss_dssp --------EEEEEEECSCCSSCCEEEEEET-----TCCEEEEESCCTTCEEEEEEEEEETTEECCCEEE--EEECCCCSC
T ss_pred --------EEEEEEecCCCCCCccEEEeCC-----CcCEEEECCCCCCCEEEEEEEEEeCCccCCcccc--cccCCCCCC
Confidence 8999888776555554444422 22223344444999999 999999998222221 122345678
Q ss_pred CCChhhhhhhhhhhccccccccccchhhcccccchhhhhhcccccc-cccccccCCceeEeecCCCCCCCceeec
Q psy8139 913 TLDEEEEEEDRESLVKDRESSVKGKEEEAKVIKDDEYYENLGDVLT-KKYSLPVNSDIQIKIDKPDDEPDYVIKG 986 (1101)
Q Consensus 913 ~~v~~~~~~~n~t~v~vp~~~~nG~i~gY~I~~~~~~y~~~~~~~~-~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 986 (1101)
.++.+... +.++|.|-+..+.+.|.||.| +|...++... ....+ .+....++|.+|.+|+.|.|+.
T Consensus 280 ~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V 346 (368)
T 1fnf_A 280 RDLEVVAA--TPTSLLISWDAPAVTVRYYRI-----TYGETGGNSPVQEFTV-PGSKSTATISGLKPGVDYTITV 346 (368)
T ss_dssp EEEEEEEE--ETTEEEEEEECCSSCCSEEEE-----EEEETTCCSCCEEEEE-ETTCCEEEECSCCTTCCEEEEE
T ss_pred CeeEEEec--CCCEEEEEeeCCCCccceEEE-----EEEECCCCCccEEEEc-CCCeeEEEecCCCCCCEEEEEE
Confidence 89988877 556666633333346999999 7776654322 22222 2355688999999999999998
No 53
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.84 E-value=3e-20 Score=215.27 Aligned_cols=299 Identities=20% Similarity=0.365 Sum_probs=206.4
Q ss_pred ceEEEc----CccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCee-eecCceeEEccCCeEEEEEEE-ecc
Q psy8139 406 TELMVS----GLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSF-IRALHDTTALEDEKVEFTVQV-EGI 479 (1101)
Q Consensus 406 ~~l~i~----~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~-~~~p~~~~v~~g~~v~L~C~~-~g~ 479 (1101)
+.|.|. +++..|+|.|+|.|.|..|... +..+.+.+.. +|.+ ...+....+.+|++++|.|.+ .+.
T Consensus 73 ~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~----s~~~~l~V~~----~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~ 144 (404)
T 3p3y_A 73 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTAL----SNRIRLQVSK----SPLWPKENLDPVVVQEGAPLTLQCNPPPGL 144 (404)
T ss_dssp CCCBCCCTTTCCTTSSCEEEEEEEECSSCEEE----EEEEEEEECC----CCCCCCCCCCCEEEETTSCEEECCCCCCCS
T ss_pred ceEEEEeccCCCCccCCEEEEEEEEcCCCeEe----eeeEEEEEec----cCccccCCCCCeEEccCCcEEEEeCCCCCC
Confidence 445554 8889999999999999877542 2335555542 2222 233455788999999999998 889
Q ss_pred CCCeEEEEECCEE-eecCCcEEEEecCCeeEEEEeecCCCC-CEEEEEEEEeCCCceEEE---EEEeecc-------CCc
Q psy8139 480 PTPKVSWYKDGFE-IFSSRRQRIVTDNDISTLIIHQAALMD-EGEIKCTATNRAGHSITK---ARLRLEA-------PPT 547 (1101)
Q Consensus 480 p~~~v~W~~~g~~-~~~~~~~~~~~~~~~~~l~I~~l~~~d-~g~Y~C~a~n~~g~~~~s---~~l~V~~-------~p~ 547 (1101)
|.+.+.|++++.. +....+......+ .|.|.++...| +|.|+|.|.|..|..... ..+.|.. +|.
T Consensus 145 p~~~v~W~~~~~~~~~~~~~~~~~~~~---~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~ 221 (404)
T 3p3y_A 145 PSPVIFWMSSSMEPITQDKRVSQGHNG---DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPS 221 (404)
T ss_dssp SCCEEEEECTTSCBCCCCSSEEECTTS---CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCC
T ss_pred CCCeEEEeCCCccccCCCCcEEEcCCC---cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCc
Confidence 9999999998743 3333343332222 79999999999 599999999988864432 3444433 333
Q ss_pred cccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCC
Q psy8139 548 IRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSL 627 (1101)
Q Consensus 548 ~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~ 627 (1101)
+..+........+..|+.+.|.|.+.|.|.+.+.|+++|..+..... .. ......|.|.++...|.|.|+|.|.|..
T Consensus 222 ~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 298 (404)
T 3p3y_A 222 FMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KF--ENFNKALRITNVSEEDSGEYFCLASNKM 298 (404)
T ss_dssp BSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EE--EGGGTEEEESSCCGGGCEEEEEEEECSS
T ss_pred cccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcc-cc--cccCceEEEccCCHhHCEEEEEEEEeCC
Confidence 33332222345688899999999999999999999999998875543 22 2235689999999999999999999999
Q ss_pred CCceeEEEEEEecCCC---CCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceE
Q psy8139 628 GEDVASFLVTVTDRPL---PPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVF 704 (1101)
Q Consensus 628 G~~~~s~~l~v~~~P~---~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si 704 (1101)
|.......+.|..+|. .|.+ .....+..++|.|...+. ...
T Consensus 299 g~~~~~~~l~V~~~p~~~~~~~~--~~v~~g~~~~l~C~~~g~----------------------------------p~p 342 (404)
T 3p3y_A 299 GSIRHTISVRVKAAPYWLDEPKN--LILAPGEDGRLVCRANGN----------------------------------PKP 342 (404)
T ss_dssp CEEEEEEEEEEEEEEEEEECCCC--EEECTTCCEEEECEEEEE----------------------------------SCC
T ss_pred CcEEEEEEEEEeCCCeeeccCCc--ceeecCCcEEEEEEcccc----------------------------------CCC
Confidence 9988888888887652 2333 233457788898875321 112
Q ss_pred EEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 705 TIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 705 ~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
.+.|... |.++.. ....... ......++|.++.......|.|.|.|..|.
T Consensus 343 ~v~W~~~----g~~~~~--------~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 392 (404)
T 3p3y_A 343 TVQWMVN----GEPLQS--------APPNPNR----EVAGDTIIFRDTQISSRAVYQCNTSNEHGY 392 (404)
T ss_dssp EEEEEET----TEEGGG--------SCCCTTE----EEETTEEEESSCCSSCCCEEEEEEEETTEE
T ss_pred ceEEEEC----CEecCC--------CCCCceE----EecCCEEEEeecCHHHCEEEEEEEEeCCCc
Confidence 4677541 111100 0000000 012357899999999999999999999997
No 54
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.84 E-value=1.8e-20 Score=219.77 Aligned_cols=313 Identities=13% Similarity=0.134 Sum_probs=191.8
Q ss_pred hhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCC-CCCCCCeeEEEEeCCCCCCCcCeeEE
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDS-PSLDRDVFTIRWEPPEYDGGSPVLGY 383 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~-~~~~~~sv~l~W~~p~~~g~~~i~~Y 383 (1101)
.+.|.|.++...|+|.|+|.|.|..|...+....+.+..++.+|. ....... .......++|.|.... +.+.. .
T Consensus 74 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~-v~~~~~~~~~~~g~~~~l~C~~~g---~~p~~-~ 148 (438)
T 1qgc_4 74 DFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPT-VSIFPPSSEQLTSGGASVVCFLNN---FYPKD-I 148 (438)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCE-EEEECCCHHHHHTTEEEEEEEEEE---EBSSC-E
T ss_pred cEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCE-EEecCCChhhccCCceEEEEEEcc---ccCCC-c
Confidence 346999999999999999999887775545555666644332221 1110000 0011345666665421 00110 1
Q ss_pred EEEEEecCC----Cce--EEcC----ccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCC
Q psy8139 384 LVEHRRTGS----PYW--VRAS----PHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAP 453 (1101)
Q Consensus 384 ~v~~~~~~~----~~w--~~~~----~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P 453 (1101)
.+.|...+. ... .... ........|.|.++...|.|.|+|.|.|..|.. .+.+.+... .++
T Consensus 149 ~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~-------~~~~~~~~~--~~~ 219 (438)
T 1qgc_4 149 NVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS-------PIVKSFNRN--ECE 219 (438)
T ss_dssp EEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS-------CEEEEEETT--C-C
T ss_pred EEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC-------ceecccccc--cce
Confidence 122221110 000 0000 000012468999999999999999999987653 233333321 223
Q ss_pred eeeecCceeEEccCCeEEEEEEEeccC--CCeEEEEEC--CEEee-----------------cCCcEEEEec--CCeeEE
Q psy8139 454 SFIRALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKD--GFEIF-----------------SSRRQRIVTD--NDISTL 510 (1101)
Q Consensus 454 ~~~~~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~l 510 (1101)
.....|....+..|++++|.|.+.|.| .+.+.|+++ +..+. ...++.+... ++...|
T Consensus 220 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 299 (438)
T 1qgc_4 220 VMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYL 299 (438)
T ss_dssp CEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEE
T ss_pred eEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEE
Confidence 334456677899999999999999988 679999986 43221 1245555443 345689
Q ss_pred EEeecCCCCCEEEEEEEEeCCC-----ceEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-e
Q psy8139 511 IIHQAALMDEGEIKCTATNRAG-----HSITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-T 579 (1101)
Q Consensus 511 ~I~~l~~~d~g~Y~C~a~n~~g-----~~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~ 579 (1101)
.|.++...|+|.|+|.|.|..| .......|.|.. +|.+...+. ...+..|+.+.|.|.+.|. |.+ .
T Consensus 300 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~---~~~~~~g~~v~L~C~~~g~~P~~~~ 376 (438)
T 1qgc_4 300 QMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAP---GSAAAAASMVTLGCLVKGYFPEPVT 376 (438)
T ss_dssp EECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECC---CGGGCCSSEEEEEEEEESCBSSCCE
T ss_pred EECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCc---ccccccCCcEEEEEEeccccCCCcE
Confidence 9999999999999999998544 222345666653 333221111 1124569999999999997 877 9
Q ss_pred eEEEECCeecCCCCceEEEeecc---eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEE
Q psy8139 580 ARWLHNGEPLTSGGRYEITHTDR---YLNLRISDARRADRGEYQAHGVNSLGEDVASFL 635 (1101)
Q Consensus 580 v~W~~~g~~l~~~~~~~~~~~~~---~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~ 635 (1101)
+.|+++|..+.......+...+. .+.|.|.++...+ |.|+|.|.|..|.......
T Consensus 377 v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~ 434 (438)
T 1qgc_4 377 VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 434 (438)
T ss_dssp EEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEE
T ss_pred EEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeee
Confidence 99999988765321111111111 2468888888778 9999999999997655443
No 55
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.84 E-value=8.4e-20 Score=203.23 Aligned_cols=268 Identities=9% Similarity=-0.023 Sum_probs=176.3
Q ss_pred EEeeCCEEEEEEEEeec-----CCCeeEEEECCeecCCCCceEEEeecc-eEEEEEccCCCCCCeEEEEEEEeCCCCcee
Q psy8139 559 LFEMGEIIKLKVSMAGM-----PPPTARWLHNGEPLTSGGRYEITHTDR-YLNLRISDARRADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 559 ~v~~g~~~~l~c~~~g~-----p~~~v~W~~~g~~l~~~~~~~~~~~~~-~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~ 632 (1101)
.+..|++++|.|.+.++ |.+.+.|.++|..+..+ ++.....+. .+.|+|.++...|.|.|+|.|.|..+....
T Consensus 11 ~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~~~ 89 (313)
T 2d9q_B 11 IVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQILD 89 (313)
T ss_dssp EECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEEEE
T ss_pred EEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCceeEE
Confidence 67889999999999997 57899999999887543 222222222 278999999999999999998664444345
Q ss_pred EEEEEEecCCCCCCccEEEEec-CCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCC
Q psy8139 633 SFLVTVTDRPLPPGKAKVVMTL-GKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPP 711 (1101)
Q Consensus 633 s~~l~v~~~P~~P~~~~~~~~~-~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP 711 (1101)
.+.+.+..+|++|.++.+.... .++++++|.++.+ ++.
T Consensus 90 ~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~-~~~---------------------------------------- 128 (313)
T 2d9q_B 90 QVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPE-THL---------------------------------------- 128 (313)
T ss_dssp EEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSC-CSS----------------------------------------
T ss_pred EEEEccCCCCCCCccceeeECCCCccEEEEecCCCC-CCC----------------------------------------
Confidence 6778888899999999887774 6789999987654 222
Q ss_pred CCCCCCCcceEEEEEEeCCC------CCceeecccccCccEEEE--cCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 712 EYDGGSPVLGYLVEHRRTGS------PYWVRASPHMVEDTELMV--SGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 712 ~~~~~~~i~~Y~V~~~~~~~------~~~~~~~~~~~~~~~~~i--~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
.+.|.|+|+..+. ..|..+... .....+++ .+|.+++.|.|+|.|.|..|.+.+++ ....+
T Consensus 129 -------~~~Y~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~---~~~~~ 197 (313)
T 2d9q_B 129 -------PTSFTLKSFKSRGNCQTQGDSILDCVPK-DGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQ---LCLDP 197 (313)
T ss_dssp -------CCEEEEEEEECCTTSCSCCCCEEEECCC-TTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCC---EEECG
T ss_pred -------ceeEEEEEEecCCCcccCCcccccCCCC-CCCcEEEECccccccceeEEEEEEEECCCCCccCcc---EEEeh
Confidence 2235555443321 123333221 23345555 56999999999999999999864221 22223
Q ss_pred CCCCCCCCCcccccc--------cccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCC
Q psy8139 784 YQRSPAAAPSFIRAL--------HDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDN 855 (1101)
Q Consensus 784 ~~~~P~~~p~~~~~~--------~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~ 855 (1101)
....++.||.++... .++.+.+.|.||.. .+...+ .|.|.|+....+.
T Consensus 198 ~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~------------~~~~~l------------~Y~v~y~~~~~~~ 253 (313)
T 2d9q_B 198 MDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP------------GLHINQ------------KCELRHKPQRGEA 253 (313)
T ss_dssp GGGEECCCCEEEECCC-------CCSCEEEEEECCGG------------GTTSCE------------EEEEEEEESSSCC
T ss_pred hheeccCcCceeEEEEecccccCCCCeEEEEECCCCC------------CCceeE------------EEEEEEccCCCCC
Confidence 334567788776522 24667888977421 112234 8999999433456
Q ss_pred CCceeeeec---cccccCCCCCCCCCccCcccce--eeccccccc------CceeecccCCCCccC
Q psy8139 856 EDDYDIVET---NEHTGTGAPSDNENESDYFPEK--TIDESVYGY------DTIVYGYDSDDLDRH 910 (1101)
Q Consensus 856 ~~~~~~v~~---~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~------~~~v~~~t~e~~P~~ 910 (1101)
+|....... ..+.+.+|. +++.|+ |+|.|..|. +..+...|.+++|..
T Consensus 254 ~w~~~~~~~~~~~~~~l~~L~-------p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~~ 312 (313)
T 2d9q_B 254 SWALVGPLPLEALQYELCGLL-------PATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAAP 312 (313)
T ss_dssp CCEEEEEECSCEEEEEECSCC-------SCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-----
T ss_pred CcEEcccccCcceEEEEeCCC-------CCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCCC
Confidence 787643321 234444555 999999 999998543 677788888877753
No 56
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.84 E-value=6e-20 Score=212.03 Aligned_cols=301 Identities=19% Similarity=0.239 Sum_probs=204.4
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~ 482 (1101)
.+.+|.|.+++..|+|.|+|.|.|..|..... ...+.+.+.. .|.+ .+.+..+.+|+++.|.|.+ .+.|.+
T Consensus 60 ~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~--~~~l~v~~~~----~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~ 131 (395)
T 1bih_A 60 DEGSLVFLRPQASDEGHYQCFAETPAGVASSR--VISFRKTYLI----ASPA--KTHEKTPIEGRPFQLDCVLPNAYPKP 131 (395)
T ss_dssp TSCCEEESSCCGGGCEEEEEEEEETTEEEECC--CEEEEEEEEE----CCCC--EEEEECCBTTEEEEECCCCCEEESCC
T ss_pred CCceEEEecCCCCCCcEEEEEEEeCCCeEEeE--EEEEEEEEee----cCCc--CCcceeeeeCCcEEEEecCCCCCCCC
Confidence 34689999999999999999999987754321 1223333221 2222 3456678899999999995 899999
Q ss_pred eEEEEECC---EEeec----CCcEEEEecCCeeEEEEeecCCCCCE---EEEEEEEeCCCceEEEEE---EeeccCCcc-
Q psy8139 483 KVSWYKDG---FEIFS----SRRQRIVTDNDISTLIIHQAALMDEG---EIKCTATNRAGHSITKAR---LRLEAPPTI- 548 (1101)
Q Consensus 483 ~v~W~~~g---~~~~~----~~~~~~~~~~~~~~l~I~~l~~~d~g---~Y~C~a~n~~g~~~~s~~---l~V~~~p~~- 548 (1101)
.+.|++++ .+... ..++.....+ .|.|.++...|+| .|+|.|.|..|....... +.+..++..
T Consensus 132 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~ 208 (395)
T 1bih_A 132 LITWKKRLSGADPNADVTDFDRRITAGPDG---NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSG 208 (395)
T ss_dssp EEEEEEEETTSCGGGCCCCCCTTEEECTTS---CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSC
T ss_pred eEEEEecCCCcCcccccccccccEEEcCCC---cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEeccccccccc
Confidence 99999975 11111 2333333222 7999999999999 999999999887554322 222111110
Q ss_pred ---ccCC-CCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEE--eecceEEEEEccCCCCCCeEEEEE
Q psy8139 549 ---RLPK-QYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEIT--HTDRYLNLRISDARRADRGEYQAH 622 (1101)
Q Consensus 549 ---~~~~-~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~--~~~~~~sl~i~~l~~~~~y~y~c~ 622 (1101)
...| .......+..|+.+.|.|.+.|.|.+.+.|+++|..+.......+. .......|.|.++...|.|.|+|.
T Consensus 209 ~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 288 (395)
T 1bih_A 209 YKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCE 288 (395)
T ss_dssp CCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEE
T ss_pred ccCCcCceecCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEE
Confidence 0000 0123557889999999999999999999999999988654332222 222234799999999999999999
Q ss_pred EEeCCCCcee-EEEEEEecCCC---CCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCC
Q psy8139 623 GVNSLGEDVA-SFLVTVTDRPL---PPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPS 698 (1101)
Q Consensus 623 A~N~~G~~~~-s~~l~v~~~P~---~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~ 698 (1101)
|.|..|.... +..|.|..+|. .|.. ......+..++|.|...+.+
T Consensus 289 a~n~~g~~~~~~~~l~V~~~P~~~~~~~~-~~~~~~g~~~~l~C~~~g~p------------------------------ 337 (395)
T 1bih_A 289 VDNGVGKPQKHSLKLTVVSAPKYEQKPEK-VIVVKQGQDVTIPCKVTGLP------------------------------ 337 (395)
T ss_dssp ECCSSSSCEEEEEEEEEEEEEEEEECCCS-EEEECTTSCEEEECEEEEES------------------------------
T ss_pred EEeCCCCceEEEEEEEEEcCCccccCCCc-ceEecCCCeEEEEEEECccc------------------------------
Confidence 9999998765 78888887663 2222 24456678899999853211
Q ss_pred CCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 699 LDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 699 ~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
...+.|... |.++. ... .. .....++|.++...+...|.|.|.|..|.
T Consensus 338 ----~p~v~W~~~----g~~~~----------~~~-~~-----~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~ 385 (395)
T 1bih_A 338 ----APNVVWSHN----AKPLS----------GGR-AT-----VTDSGLVIKGVKNGDKGYYGCRATNEHGD 385 (395)
T ss_dssp ----CCCCEEEET----TEECC----------SSS-EE-----EETTEEEESSCCSTTCEEEEEEEEETTEE
T ss_pred ----CCeeEEEEC----CEECC----------CCc-eE-----EECCEEEEeeCCcccCEEEEEEEEccCCC
Confidence 012567642 11110 000 11 11238999999999999999999999996
No 57
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.83 E-value=2.2e-19 Score=184.99 Aligned_cols=189 Identities=28% Similarity=0.485 Sum_probs=162.2
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecC-CcEEEEe-cCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSS-RRQRIVT-DNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~-~~~~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.+|.|...|.+..+..|++++|.|.+.+.|.+.+.|++++..+... .++.+.. .++...|.|.++...|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 5788888899999999999999999999999999999999988654 3444443 4556699999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCccccCCCCC--CCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEE
Q psy8139 529 NRAGHSITKARLRLEAPPTIRLPKQYE--DGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNL 606 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~~~~~~~--~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl 606 (1101)
|..|.......|.|..+|.+..++... ....+..|..+.|.|.+.|.|.+.+.|++++..+....++.+...+....|
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L 162 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEE
T ss_pred ECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEE
Confidence 999988888899998877765544322 234677899999999999999999999999999987777877777778899
Q ss_pred EEcc-CCCCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy8139 607 RISD-ARRADRGEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 607 ~i~~-l~~~~~y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
.|.+ +...|.|.|+|.|.|..|....+..|.|.
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp ECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9999 99999999999999999998888888775
No 58
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.83 E-value=1.4e-19 Score=199.20 Aligned_cols=218 Identities=16% Similarity=0.204 Sum_probs=162.9
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCC-CeE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPT-PKV 484 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~-~~v 484 (1101)
..|.|.+++..|+|.|+|.|.| |. +..+.+.+. .+|.+...+.+..+.+|+.+.|.|.+.+ |. +.+
T Consensus 57 ~~L~i~~~~~~d~G~Y~C~~~n--g~------~~~~~l~V~----~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v 123 (290)
T 2o26_X 57 NEWIQEKAEATRTGTYTCSNSN--GL------TSSIYVFVR----DPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQY 123 (290)
T ss_dssp SEEEETTCCGGGCEEEEEEESS--SC------EEEEEEEEE----CSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEE
T ss_pred ceEEEeccCHHhCeEEEEEeeC--Cc------cEEEEEEEe----CCCcccccccceEEecCCeEEEeCcCCC-CCCceE
Confidence 7899999999999999999998 43 233455544 2333335566788899999999999996 77 899
Q ss_pred EEE-ECCEEeecCCcEEEEecCCeeEEEEeecCCCCCE-EEEEEEEeCCCceEE-EEEEeec----cCCccccCCCCCCC
Q psy8139 485 SWY-KDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEG-EIKCTATNRAGHSIT-KARLRLE----APPTIRLPKQYEDG 557 (1101)
Q Consensus 485 ~W~-~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g-~Y~C~a~n~~g~~~~-s~~l~V~----~~p~~~~~~~~~~~ 557 (1101)
+|+ ++|..+....++.....+ .|.|.++...|+| .|+|.|.|..|...+ ...|.|. .+|.+...+..
T Consensus 124 ~W~~~~g~~l~~~~~~~~~~~~---~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~--- 197 (290)
T 2o26_X 124 SLIECDGKSLPTDLTFVPNPKA---GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETS--- 197 (290)
T ss_dssp EEEETTSCCCCTTCEEEEETTT---EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSB---
T ss_pred EEEeCCCcCCCCCCceeeCCCC---CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCc---
Confidence 995 678777655544443332 7999999999999 999999998555333 4677766 56766544432
Q ss_pred eEEeeCCEEEEEEEEeecCCCe-eEEEECCeec----CCCCceEEE---eecceEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 558 LLFEMGEIIKLKVSMAGMPPPT-ARWLHNGEPL----TSGGRYEIT---HTDRYLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 558 ~~v~~g~~~~l~c~~~g~p~~~-v~W~~~g~~l----~~~~~~~~~---~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
..+..|+.+.|.|.+.|.|.+. +.|++++..+ .......+. .......|.|.++...|.|.|+|.|.|..|.
T Consensus 198 ~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~ 277 (290)
T 2o26_X 198 HLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGS 277 (290)
T ss_dssp CCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCE
T ss_pred ceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCc
Confidence 3677899999999999999986 9999998773 322222221 1223678999999999999999999999999
Q ss_pred ceeEEEEEEecCC
Q psy8139 630 DVASFLVTVTDRP 642 (1101)
Q Consensus 630 ~~~s~~l~v~~~P 642 (1101)
......|.|..+|
T Consensus 278 ~~~~~~l~V~~~P 290 (290)
T 2o26_X 278 ANVTTTLKVVEKG 290 (290)
T ss_dssp EEEEEEECC----
T ss_pred EEEEEEEEEEeCC
Confidence 9888888887654
No 59
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.83 E-value=1.9e-19 Score=184.93 Aligned_cols=185 Identities=26% Similarity=0.512 Sum_probs=159.0
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCC--cEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSR--RQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~--~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.+|.|...|.+..+.+|++++|.|.+.+.|.+.+.|+++|..+.... .+.+...++...|.|.++...|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 56788888889999999999999999999999999999998776543 5555556677899999999999999999999
Q ss_pred eCCCceEEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEE
Q psy8139 529 NRAGHSITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLN 605 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~s 605 (1101)
|..|.......|.|.. +|.+...+ ....+..|..+.|.|.+.+.|.+.+.|+++|..+..+..+.+...+...+
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~---~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 160 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRL---QSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYS 160 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECC---CCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEE
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCC---ccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEE
Confidence 9999888888888873 45444333 34578889999999999999999999999999998877888777777778
Q ss_pred EEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 606 LRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 606 l~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
|.|.++...|.|.|+|.|.|..|....+..|.|
T Consensus 161 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 161 LLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 999999999999999999999998888877776
No 60
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.83 E-value=1.6e-21 Score=246.49 Aligned_cols=245 Identities=19% Similarity=0.241 Sum_probs=29.9
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeec---CceeEEccCCeEEEEEEEeccCC
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRA---LHDTTALEDEKVEFTVQVEGIPT 481 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~---p~~~~v~~g~~v~L~C~~~g~p~ 481 (1101)
...|.|.+++..|.|.|+|.|.|..|.. +..+.+.+. .+|.+... +....+..|+.++|.|.+.|.|.
T Consensus 289 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~-----~~~~~l~V~----~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~ 359 (772)
T 3v2a_R 289 LSTLTIDGVTRSDQGLYTCAASSGLMTK-----KNSTFVRVH----EKPFVAFGSGMESLVEATVGERVRIPAKYLGYPP 359 (772)
T ss_dssp EEEEEESSCCSTTCSEEEEEEECSSCEE-----EEEEEEEEE----CCCC------------------------------
T ss_pred EEEEEECcCCcCCCeEEEEEEEcCCcce-----eEEEEEEEe----CCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCC
Confidence 3579999999999999999999977643 233555554 23433322 34567889999999999999999
Q ss_pred CeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE--EEEEeeccCCccccCCCCCCCeE
Q psy8139 482 PKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT--KARLRLEAPPTIRLPKQYEDGLL 559 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~--s~~l~V~~~p~~~~~~~~~~~~~ 559 (1101)
+.+.|+++|..+...... . +...|.|.++...|+|.|+|.|.|..|.... ...|.|..+|.+...........
T Consensus 360 ~~v~W~~~g~~l~~~~~~--~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~ 434 (772)
T 3v2a_R 360 PEIKWYKNGIPLESNHTI--K---AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDS 434 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEEEEECCEeCCCCceE--c---cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccc
Confidence 999999999877653221 1 2348999999999999999999999887643 45677777777643321111123
Q ss_pred EeeCCEEEEEEEEeecCCCe-eEEEECCee--------------------------------cCC-CCceEEEee--cce
Q psy8139 560 FEMGEIIKLKVSMAGMPPPT-ARWLHNGEP--------------------------------LTS-GGRYEITHT--DRY 603 (1101)
Q Consensus 560 v~~g~~~~l~c~~~g~p~~~-v~W~~~g~~--------------------------------l~~-~~~~~~~~~--~~~ 603 (1101)
+..|+.+.|.|.+.+.|.|. +.|++++.. +.. ...+.+... ...
T Consensus 435 ~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~ 514 (772)
T 3v2a_R 435 YQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTV 514 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEE
Confidence 67899999999999999997 999986321 100 001111111 112
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecC
Q psy8139 604 LNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEP 665 (1101)
Q Consensus 604 ~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p 665 (1101)
..|.|.++ .|.|.|+|.|.|..|.......+.|..+|.....+......+..+.|.|...
T Consensus 515 ~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~ 574 (772)
T 3v2a_R 515 STLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTAD 574 (772)
T ss_dssp --------------------------------------------------------------
T ss_pred EEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCceeeccCCcccccCCceEEEEecc
Confidence 46667666 6899999999999998888888888876644333333445677888888853
No 61
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.83 E-value=1.5e-19 Score=207.60 Aligned_cols=294 Identities=20% Similarity=0.242 Sum_probs=202.4
Q ss_pred cceEEEcCccC-CccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCC
Q psy8139 405 DTELMVSGLEP-GWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTP 482 (1101)
Q Consensus 405 ~~~l~i~~L~p-~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~ 482 (1101)
+++|.|.++.. .|+|.|+|.|.|..|.... ..+.+.+...+ +.....+....+.+|+++.|.|.+ .+.|.+
T Consensus 60 ~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s----~~~~l~v~~~~---~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~ 132 (382)
T 1cs6_A 60 AGDLVISNPVKAKDAGSYQCVATNARGTVVS----REASLRFGFLQ---EFSAEERDPVKITEGWGVMFTCSPPPHYPAL 132 (382)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEEC----CCEEEEEEEEC---CCCSSCCCCEEEETTSCEEECCCCCSEESCC
T ss_pred CCeEEEecccccccCEEEEEEEEcCCcEEEe----cceEEEeeccc---cccccCCCceEEecCCcEEEEeCCCCCCCCc
Confidence 46799999986 9999999999998875421 22333332111 111123456788999999999985 567889
Q ss_pred eEEEEECCEEee--cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEE-----EEEeecc------CCccc
Q psy8139 483 KVSWYKDGFEIF--SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITK-----ARLRLEA------PPTIR 549 (1101)
Q Consensus 483 ~v~W~~~g~~~~--~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s-----~~l~V~~------~p~~~ 549 (1101)
.+.|++++..+. ...+.... .....|.|.++...|+|.|+|.+.|..|..... ..|.|.. +|.+.
T Consensus 133 ~i~W~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~ 210 (382)
T 1cs6_A 133 SYRWLLNEFPNFIPADGRRFVS--QTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIK 210 (382)
T ss_dssp EEEEEESSTTCBCCCCSSEEEC--TTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEE
T ss_pred EEEEEECCCccccccCceEEEe--cCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCcee
Confidence 999999886543 22333222 223489999999999999999999987643322 3444322 33332
Q ss_pred cCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 550 LPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 550 ~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .......|.|.++...|.|.|+|.|.|..|.
T Consensus 211 ~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 282 (382)
T 1cs6_A 211 AK--FPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK------WLSSEPLLHIQNVDFEDEGTYECEAENIKGR 282 (382)
T ss_dssp EC--CCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC------CSBSSSEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred cc--CCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE------EecCCcEEEEccCChhhCEEEEEEEEcCCCe
Confidence 21 123457888999999999999999999999988765431 1223668999999999999999999999999
Q ss_pred ceeEEEEEEecCCC---CCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEE
Q psy8139 630 DVASFLVTVTDRPL---PPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTI 706 (1101)
Q Consensus 630 ~~~s~~l~v~~~P~---~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l 706 (1101)
......+.|..+|. .|.. .....+..+.|.|...+. ....+
T Consensus 283 ~~~~~~l~V~~~p~~~~~~~~--~~~~~g~~~~l~C~~~g~----------------------------------p~p~v 326 (382)
T 1cs6_A 283 DTYQGRIIIHAQPDWLDVITD--TEADIGSDLRWSCVASGK----------------------------------PRPAV 326 (382)
T ss_dssp EEEEEEEEEEEEEEEEECCCC--EEEETTCCEEEECEEEEE----------------------------------SCCEE
T ss_pred EEEEEEEEEecCCCcccCCCc--cEEcCCCeEEEEEEeeee----------------------------------cCCEE
Confidence 88888888886653 2222 234567789999985321 11246
Q ss_pred EeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 707 RWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 707 ~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
.|... |.++. .. .... .....++|.++.+...+.|.|.|.|..|.
T Consensus 327 ~W~~~----g~~~~---------~~-~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 371 (382)
T 1cs6_A 327 RWLRD----GQPLA---------SQ-NRIE-----VSGGELRFSKLVLEDSGMYQCVAENKHGT 371 (382)
T ss_dssp EEEET----TEECC---------CC-SSEE-----EETTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEEEC----CEECC---------CC-ceEE-----EECCEEEECcCCcccCEEEEEEEEeCCCe
Confidence 77642 11110 00 0011 12347899999999999999999999997
No 62
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.82 E-value=2.3e-20 Score=235.88 Aligned_cols=338 Identities=15% Similarity=0.123 Sum_probs=107.8
Q ss_pred hhhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCC------CcccCCCCCCCC--CeeEEEEeCCCCC
Q psy8139 304 KQAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGK------PQLLPDSPSLDR--DVFTIRWEPPEYD 375 (1101)
Q Consensus 304 ~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~------p~~l~~~~~~~~--~sv~l~W~~p~~~ 375 (1101)
+.+.|.|.++...|+|.|.|.+. ....+..+.+.+.. |.+|.. +..+. .... ..++|.|....
T Consensus 84 ~~~~l~I~~~~~~d~G~Y~C~~~---~~~~~~~~~v~v~~-~~~~~~~~~~~~~~~~~---v~~G~~~~v~L~C~~~~-- 154 (772)
T 3v2a_R 84 FCKTLTIPKVIGNDTGAYKCFYR---ETDLASVIYVYVQD-YRSPFIASVSDQHGVVY---ITENKNKTVVIPCLGSI-- 154 (772)
T ss_dssp ----------------------------------------------------CEEEEE---EESSCCCEEEECCCCSC--
T ss_pred EEEEEEECCCcHhhCEeEEEEEc---CCCEEEEEEEEECC-CCCCceEcCcccceeEE---EecCCCCeEEEEccCCC--
Confidence 46789999999999999999885 22223334444432 222211 11111 1123 66888887652
Q ss_pred CCcCeeEEEEEEEecCCCceEEcC--ccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCC
Q psy8139 376 GGSPVLGYLVEHRRTGSPYWVRAS--PHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAP 453 (1101)
Q Consensus 376 g~~~i~~Y~v~~~~~~~~~w~~~~--~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P 453 (1101)
.. ..+.+... ..+..+.... ........|.|.++++.|.|.|+|.+.+..+. .. +....+.+.. ..+|
T Consensus 155 p~---~~v~w~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~---s~~~~~~v~~--~~~~ 224 (772)
T 3v2a_R 155 SN---LNVSLCAR-YPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDES-YQ---SIMYIVVVVG--YRIY 224 (772)
T ss_dssp SS---CCEEEEEE-TTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEE-EE---CCEEEEEEEC--CCEE
T ss_pred CC---cEEEEEec-CCCccccCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCce-EE---EEEEEEEEec--Cccc
Confidence 11 12222211 0011111111 01123467999999999999999999975432 11 2223333321 2233
Q ss_pred eeeecC-ceeEEccCCeEEEEEEEec--cCCCeEEEEECCEEeecCCcEEE--------EecCCeeEEEEeecCCCCCEE
Q psy8139 454 SFIRAL-HDTTALEDEKVEFTVQVEG--IPTPKVSWYKDGFEIFSSRRQRI--------VTDNDISTLIIHQAALMDEGE 522 (1101)
Q Consensus 454 ~~~~~p-~~~~v~~g~~v~L~C~~~g--~p~~~v~W~~~g~~~~~~~~~~~--------~~~~~~~~l~I~~l~~~d~g~ 522 (1101)
.+...| ....+..|++++|.|.+.+ .|.+.+.|++++..+........ ........|.|.++...|+|.
T Consensus 225 ~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 304 (772)
T 3v2a_R 225 DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGL 304 (772)
T ss_dssp EEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSE
T ss_pred eeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeE
Confidence 444444 4478999999999999987 45668999999876544322211 011234589999999999999
Q ss_pred EEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecc
Q psy8139 523 IKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDR 602 (1101)
Q Consensus 523 Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~ 602 (1101)
|+|.+.|..|.......|.|..+|.+...+.......+..|+.+.|.|.+.+.|.+.+.|+++|..+.....+ . .
T Consensus 305 Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~--~---~ 379 (772)
T 3v2a_R 305 YTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTI--K---A 379 (772)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCC-------------------------------------------------------
T ss_pred EEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceE--c---c
Confidence 9999999999888888999998887655443334556788999999999999999999999999887653222 1 3
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCce--eEEEEEEecCCCCCCc----cEEEEecCCeEEEEeecC
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDV--ASFLVTVTDRPLPPGK----AKVVMTLGKSVTLSWSEP 665 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~--~s~~l~v~~~P~~P~~----~~~~~~~~~sv~lsW~~p 665 (1101)
...|.|.++...|.|.|+|.|.|..|... ....+.|..+|..+.. +......+..++|.|...
T Consensus 380 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~ 448 (772)
T 3v2a_R 380 GHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVY 448 (772)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEec
Confidence 57899999999999999999999988754 3455666655543211 111234567788888853
No 63
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.82 E-value=8.3e-20 Score=214.90 Aligned_cols=293 Identities=15% Similarity=0.073 Sum_probs=180.5
Q ss_pred hhhhhhhcccccCcceEEEeeeccccccc-------ccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCC
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNV-------GTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGG 377 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~-------s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~ 377 (1101)
.+.|.|.++...|.|.|.|.|.|..|... +....+.+...| +..|.............++|.|.... .
T Consensus 141 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~--~~~p~~~~~~~v~~G~~v~l~C~~~g---~ 215 (450)
T 1z7z_I 141 EVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLP--ATPPQLVSPRVLEVDTQGTVVCSLDG---L 215 (450)
T ss_dssp EEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCC--SSCCEEECCSEEETTSEEEEEEEEES---C
T ss_pred ceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccC--CCCCEecCceeEEeCCcEEEEEEeeC---C
Confidence 45799999999999999999998877432 133444444332 22222210001233566777776641 1
Q ss_pred cCeeEEEEEEEecCCCceEEcCccccccceEEE---cCccCCccE--EEEEEEEecCCCCCCCCCCcceEEEeccCCCCC
Q psy8139 378 SPVLGYLVEHRRTGSPYWVRASPHMVEDTELMV---SGLEPGWRY--QFRITAENVVGFSEPGPLSEPLTVTYQRSPAAA 452 (1101)
Q Consensus 378 ~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i---~~L~p~d~y--~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~ 452 (1101)
.+.....+.|...+...-... . .....+.+ .++++.|.| .|+|.|.|..|.... ...+.+... .+
T Consensus 216 ~P~~~~~~~W~~~~~~~~~~~--~-~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~-----~~~l~V~~~--~~ 285 (450)
T 1z7z_I 216 FPVSEAQVHLALGDQRLNPTV--T-YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQET-----LQTVTIYSF--PA 285 (450)
T ss_dssp TTGGGCEEEEEETTEECCCEE--E-EETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEE-----EEEEEEECC--CC
T ss_pred CCCCceEEEEeCCCEeCCceE--E-ecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEE-----EEEEEEecC--CC
Confidence 021011222221110000000 0 00111222 177899988 999999998876432 234444322 23
Q ss_pred CeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCC
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAG 532 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g 532 (1101)
|.+.. .+..+.+|+.++|.|.+. |.|.++| +|..+.. .+....|.|.++...|+|.|+|.|.|..+
T Consensus 286 p~i~~--~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~--------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 351 (450)
T 1z7z_I 286 PNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP--------LGPRAQLLLKATPEDNGRSFSCSATLEVA 351 (450)
T ss_dssp CEEEE--SCSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTCEEEEEEEEEET
T ss_pred CeEec--CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCC--------CCceEEEEEecCcccCCceEEEEEEcCCC
Confidence 66543 345889999999999998 8889999 6666521 12233799999999999999999997655
Q ss_pred -ce---EEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEE
Q psy8139 533 -HS---ITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRI 608 (1101)
Q Consensus 533 -~~---~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i 608 (1101)
.. ..+..|.|..+|.+...+. +....+..|+.+.|.|.+.|.|.|.+.|+++|..+...+. .+
T Consensus 352 g~~~~~~~~~~l~V~~~P~~~~~~~-p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~----------~~-- 418 (450)
T 1z7z_I 352 GQLIHKNQTRELRVLYGPRLDERDC-PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGE----------SV-- 418 (450)
T ss_dssp TEEEEEEEEEECEEEEEEECCSTTS-CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTS----------CE--
T ss_pred CcccccceeEEEEEecCCceeeccC-CCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCC----------eE--
Confidence 33 3567888888887765432 2345788999999999999999999999999874332211 11
Q ss_pred ccCCCCCCeEEEEEEEeCCCCceeEEEEEEec
Q psy8139 609 SDARRADRGEYQAHGVNSLGEDVASFLVTVTD 640 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~ 640 (1101)
.+...|.|.|+|.|.|..|.....+.|.|..
T Consensus 419 -~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 419 -TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp -ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred -eEehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 4778899999999999999999998888864
No 64
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.82 E-value=6.7e-19 Score=193.60 Aligned_cols=224 Identities=15% Similarity=0.149 Sum_probs=167.3
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCe-eeecCceeEEccCCeEEEEEEEeccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPS-FIRALHDTTALEDEKVEFTVQVEGIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~-~~~~p~~~~v~~g~~v~L~C~~~g~p~~ 482 (1101)
....|.|.+++..|.|.|+|.|.|..|.. +..+.+.+.. +|. +...+....+..|+++.|.|.+.+.|.+
T Consensus 49 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~V~~----~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~ 119 (289)
T 3ejj_X 49 PGSTLTTRNATFKNTGTYRCTELEDPMAG-----STTIHLYVKD----PAHSWNLLAQEVTVVEGQEAVLPCLITDPALK 119 (289)
T ss_dssp SCCEEEESSCCGGGCEEEEEECCC----------CEEEEEEECC----SSCSEEESCSEEEEETTSCEEECEEESCGGGG
T ss_pred CccEEEEeeeccccCEEEEEEEeccCCcc-----eeEEEEEEeC----CCcceecccceEEEecCCceEeEEEccCCCcc
Confidence 44789999999999999999999877753 2345555542 222 5667788889999999999999988777
Q ss_pred e-EEEEE-CCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe-CCCceEEEEEEeec----cCCccccCCCCC
Q psy8139 483 K-VSWYK-DGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN-RAGHSITKARLRLE----APPTIRLPKQYE 555 (1101)
Q Consensus 483 ~-v~W~~-~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n-~~g~~~~s~~l~V~----~~p~~~~~~~~~ 555 (1101)
. +.|++ ++..+.....+.+...+ .|.|.++...|+|.|+|.|.| ..+.......|.|. .+|.+...+.
T Consensus 120 ~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~-- 194 (289)
T 3ejj_X 120 DSVSLMREGGRQVLRKTVYFFSPWR---GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPS-- 194 (289)
T ss_dssp GSEEEEEGGGEECCTTCCEEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESS--
T ss_pred eEEEEEecCCeecCCCccEEECCCC---CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCC--
Confidence 5 99986 66777666666554333 799999999999999999994 44444556778887 4666654443
Q ss_pred CCeEEeeCCEEEEEEEEee-cCCCeeEEEECCeecCCCCceEEE--eecceEEEEEccCCCCCCeEEEEEEEeCCCCcee
Q psy8139 556 DGLLFEMGEIIKLKVSMAG-MPPPTARWLHNGEPLTSGGRYEIT--HTDRYLNLRISDARRADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 556 ~~~~v~~g~~~~l~c~~~g-~p~~~v~W~~~g~~l~~~~~~~~~--~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~ 632 (1101)
...+..|..+.|.|.+.+ .|.+.+.|++++..+......... .......|.|.++...|.|.|+|.|.|..|....
T Consensus 195 -~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 273 (289)
T 3ejj_X 195 -KLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTA 273 (289)
T ss_dssp -SEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEE
T ss_pred -ceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccc
Confidence 335568999999999998 789999999999888654322211 1112578999999999999999999999999998
Q ss_pred EEEEEEecCC
Q psy8139 633 SFLVTVTDRP 642 (1101)
Q Consensus 633 s~~l~v~~~P 642 (1101)
++.|.+...+
T Consensus 274 s~~L~~~~~~ 283 (289)
T 3ejj_X 274 TMNFQVVESH 283 (289)
T ss_dssp EEEEECC---
T ss_pred cEEEEEEecc
Confidence 8888876543
No 65
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.82 E-value=4.8e-20 Score=204.92 Aligned_cols=225 Identities=18% Similarity=0.186 Sum_probs=164.1
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~ 482 (1101)
.+.+|.|.++++.|+|.|+|.|.|..+... +..+.+.+... .++.+...+.......|..+.|.|.+ .|.|.+
T Consensus 72 ~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~----~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~ 145 (308)
T 4fom_A 72 NDATITLHNIGFSDSGKYICKAVTFPLGNA----QSSTTVTVLVE--PTVSLIKGPDSLIDGGNETVAAICIAATGKPVA 145 (308)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEETTTEEE----EEEEEEEEEBC--CEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCC
T ss_pred CceEEEEccCCHHHCEEEEEEEeeCCCcce----eeeeEEEeeec--cccccccccceeEEcCCceEEEEEEecCCcCCc
Confidence 446799999999999999999998643221 12233333321 22223445566666788999999975 689999
Q ss_pred eEEEEECCEEeecCCcEEEEecC---CeeEEEEeecCCCCCEEEEEEEEeCCCceEE--EEEEeeccCCccccCCCCCCC
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDN---DISTLIIHQAALMDEGEIKCTATNRAGHSIT--KARLRLEAPPTIRLPKQYEDG 557 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~---~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~--s~~l~V~~~p~~~~~~~~~~~ 557 (1101)
.++|++++..+..... ....+ ..+.|.|.++...|.|.|+|.|.|..|.... +..|.|..+|.+...+. ..
T Consensus 146 ~i~W~~~~~~~~~~~~--~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~--~~ 221 (308)
T 4fom_A 146 HIDWEGDLGEMESTTT--SFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGY--DG 221 (308)
T ss_dssp EEEECCCSSBCCEEEE--ECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCC--CS
T ss_pred eEEEEECCcccccccc--eeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEccc--ce
Confidence 9999998876543211 00011 1237999999999999999999998776544 45677777777654332 23
Q ss_pred eEEeeCCEEEEEEEEeecCCC-eeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 558 LLFEMGEIIKLKVSMAGMPPP-TARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 558 ~~v~~g~~~~l~c~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
..+..|+.+.|.|.+.|.|.| .+.|++++..+..+.. ..+...+.|.+++..|.|.|+|.|.|..|..+.+..|
T Consensus 222 ~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l 296 (308)
T 4fom_A 222 NWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVI 296 (308)
T ss_dssp CEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB-----CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEEC
T ss_pred eeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE-----EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEE
Confidence 366778899999999999988 6999999887764321 1234567788999999999999999999999999999
Q ss_pred EEecCCC
Q psy8139 637 TVTDRPL 643 (1101)
Q Consensus 637 ~v~~~P~ 643 (1101)
.|..+|.
T Consensus 297 ~V~~~P~ 303 (308)
T 4fom_A 297 YISDPPH 303 (308)
T ss_dssp CEECCC-
T ss_pred EEEcCCC
Confidence 9998774
No 66
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.82 E-value=3.2e-18 Score=188.32 Aligned_cols=264 Identities=19% Similarity=0.241 Sum_probs=174.7
Q ss_pred CCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCC-CceEEcCccccccceEEEcCccCCccEEEEEE
Q psy8139 346 GPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRIT 424 (1101)
Q Consensus 346 ~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~ 424 (1101)
.+|++|..+.+. .++.+++.|+|.+| + ..+.+|.|+++..+. ..|.... ......++.|.+|.|++.|.|+|.
T Consensus 19 ~~p~~P~~l~~~-~~~~~sv~l~W~~p--~--~~~~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~ 92 (290)
T 3r8q_A 19 PAIPAPTDLKFT-QVTPTSLSAQWTPP--N--VQLTGYRVRVTPKEKTGPMKEIN-LAPDSSSVVVSGLMVATKYEVSVY 92 (290)
T ss_dssp -CCCCCEEEEEE-EECSSCEEEEEECC--S--SCCCEEEEEEEESSSSSCCEEEE-ECTTCCEEEECSCCSSCEEEEEEE
T ss_pred CCCCCCCceEEE-ECCCCEEEEEEeCC--C--CCeeEEEEEEEeCCCCCceEEEE-cCCCccEEEeCCCCCCCEEEEEEE
Confidence 345555555544 78899999999998 2 378999999987653 3454432 223567899999999999999999
Q ss_pred EEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEec
Q psy8139 425 AENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTD 504 (1101)
Q Consensus 425 A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~ 504 (1101)
|.|..|.+.++. ..+..... +. .|.+ |.+...+.....+.|...+.
T Consensus 93 a~~~~g~s~~s~----~~~~t~~~-~~------~P~~----------l~~~~~~~~sv~l~W~~p~~------------- 138 (290)
T 3r8q_A 93 ALKDTLTSRPAQ----GVVTTLEN-VS------PPRR----------ARVTDATETTITISWRTKTE------------- 138 (290)
T ss_dssp EEETTEECCCEE----EEEECCCC-CC------CCEE----------EEEEEECSSCEEEEEECCSC-------------
T ss_pred EEeCCCCCCCcc----eeEecCCC-CC------CCce----------eEEEEcCCCeEEEEEeCCCC-------------
Confidence 999988876541 22221111 11 1222 22333333344566743210
Q ss_pred CCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEE
Q psy8139 505 NDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLH 584 (1101)
Q Consensus 505 ~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~ 584 (1101)
.-+. |.+......+.
T Consensus 139 ------------~~~~--Y~v~~~~~~~~--------------------------------------------------- 153 (290)
T 3r8q_A 139 ------------TITG--FQVDAVPANGQ--------------------------------------------------- 153 (290)
T ss_dssp ------------CCCE--EEEEEEESSSC---------------------------------------------------
T ss_pred ------------cccE--EEEEEEECCCC---------------------------------------------------
Confidence 0011 22111110000
Q ss_pred CCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeec
Q psy8139 585 NGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSE 664 (1101)
Q Consensus 585 ~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~ 664 (1101)
............++.|.+|.++..|.|++.|.|..|.+.. ..+.....|.+|.++.+...+.+++.|+|.+
T Consensus 154 --------~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~-~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~ 224 (290)
T 3r8q_A 154 --------TPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSP-VVIDASTAIDAPSNLRFLATTPNSLLVSWQP 224 (290)
T ss_dssp --------CCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCCCCEEEEEEEEETTEEEEEEEC
T ss_pred --------cceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCC-EEEEecCCCCCCCccEEEeeCCCEEEEEEeC
Confidence 0001111122456889999999999999999999887654 3455667789999998888888888888886
Q ss_pred CCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCc
Q psy8139 665 PEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVED 744 (1101)
Q Consensus 665 p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~ 744 (1101)
|. +.+.+|.|.|+..++..|..........
T Consensus 225 p~--------------------------------------------------~~~~~Y~v~~~~~~~~~~~~~~~~~~~~ 254 (290)
T 3r8q_A 225 PR--------------------------------------------------ARITGYIIKYEKPGSPPREVVPRPRPGV 254 (290)
T ss_dssp CS--------------------------------------------------SCCCEEEEEEECTTSCCEECSSCCCTTC
T ss_pred CC--------------------------------------------------CcccEEEEEEEeCCCCcceeEeccCCCc
Confidence 53 1467888888877766665443444677
Q ss_pred cEEEEcCCCCCceEEEEEEEEcCCccCCC
Q psy8139 745 TELMVSGLEPGWRYQFRITAENVVGFSEP 773 (1101)
Q Consensus 745 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 773 (1101)
++++|.+|.|++.|.|+|.|.|..|.|++
T Consensus 255 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 283 (290)
T 3r8q_A 255 TEATITGLEPGTEYTIYVIALKNNQKSEP 283 (290)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCcCCc
Confidence 89999999999999999999999999765
No 67
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.82 E-value=1.7e-19 Score=201.21 Aligned_cols=264 Identities=16% Similarity=0.192 Sum_probs=180.9
Q ss_pred CCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEEEe
Q psy8139 348 PGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAEN 427 (1101)
Q Consensus 348 P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n 427 (1101)
.+....|.|.....+....+.|..... ..++. ...... .......|.|.+++..|+|.|+|.|.|
T Consensus 19 ~G~~v~L~C~~~~~~~~~~v~W~k~~~--~~~~~-------~~~~~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (315)
T 1itb_B 19 ANEIDVRPCPLNPNEHKGTITWYKDDS--KTPVS-------TEQASR------IHQHKEKLWFVPAKVEDSGHYYCVVRN 83 (315)
T ss_dssp TTSCCCCBCCCCSCCCSSCCCEECTTS--CSCSC-------CCTTSS------SEECSSBEECTTCCGGGCSCCEECCCS
T ss_pred CCCcEEEEeeccCcCCCceEEEEeCCC--cCccc-------cccCCc------EeccCCeEEECCCChhhCEEEEEEEeC
Confidence 355667777633333356888987521 10110 000111 112235899999999999999999999
Q ss_pred cCCCCCCCCCCcceEEEeccCCCCCCeeeec---CceeEEccCCeEEEEEEE------eccCCCeEEEEECCEEeecCCc
Q psy8139 428 VVGFSEPGPLSEPLTVTYQRSPAAAPSFIRA---LHDTTALEDEKVEFTVQV------EGIPTPKVSWYKDGFEIFSSRR 498 (1101)
Q Consensus 428 ~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~---p~~~~v~~g~~v~L~C~~------~g~p~~~v~W~~~g~~~~~~~~ 498 (1101)
..|.... .+.+.+. ..+|.+... +....+..|+++.|.|.+ .|.|.+.++|++++..+.....
T Consensus 84 ~~g~~~~-----~~~v~v~---~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~ 155 (315)
T 1itb_B 84 SSYCLRI-----KISAKFV---ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 155 (315)
T ss_dssp SSCCCCE-----ECCCEEE---CCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSS
T ss_pred CceEEEE-----EEEEEEe---CCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccc
Confidence 8765431 1222222 133333222 234568899999999998 8999999999999998865332
Q ss_pred EEEEecCCeeEEEEeecCCCCCEEEEEEEE-eCCCceEE---EEEEeec-----cCCccccCCCCCCCeEEeeCCEEEEE
Q psy8139 499 QRIVTDNDISTLIIHQAALMDEGEIKCTAT-NRAGHSIT---KARLRLE-----APPTIRLPKQYEDGLLFEMGEIIKLK 569 (1101)
Q Consensus 499 ~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~-n~~g~~~~---s~~l~V~-----~~p~~~~~~~~~~~~~v~~g~~~~l~ 569 (1101)
... ..++ .|.|.++...|+|.|+|.|. |..|.... ...+.+. .+|.+..++. ....+..|+.+.|.
T Consensus 156 ~~~-~~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~--~~~~~~~g~~v~l~ 230 (315)
T 1itb_B 156 HFS-GVKD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPAN--ETMEVDLGSQIQLI 230 (315)
T ss_dssp SEE-EETT--EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCS--EEEECCSSSCEEEE
T ss_pred eEe-ecCc--eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCC--CcEEEeCCCcEEEE
Confidence 222 2233 89999999999999999999 78887633 3334333 4555544332 12467789999999
Q ss_pred EEEeecCCCeeEEEECCeecCCCCceEE-----Eee-------cceEEEEEccCCCCC-CeEEEEEEEeCCCCceeEEEE
Q psy8139 570 VSMAGMPPPTARWLHNGEPLTSGGRYEI-----THT-------DRYLNLRISDARRAD-RGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 570 c~~~g~p~~~v~W~~~g~~l~~~~~~~~-----~~~-------~~~~sl~i~~l~~~~-~y~y~c~A~N~~G~~~~s~~l 636 (1101)
|.+.|.|.|.+.|+++|..+........ ... ...+.|.|.++...| .|.|+|.|.|..|....++.|
T Consensus 231 C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l 310 (315)
T 1itb_B 231 CNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 310 (315)
T ss_dssp EEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEE
T ss_pred EEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEE
Confidence 9999999999999999999876442111 111 124589999999999 999999999999999888887
Q ss_pred EEe
Q psy8139 637 TVT 639 (1101)
Q Consensus 637 ~v~ 639 (1101)
.|.
T Consensus 311 ~v~ 313 (315)
T 1itb_B 311 IYP 313 (315)
T ss_dssp ECC
T ss_pred Eec
Confidence 764
No 68
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.82 E-value=7.7e-19 Score=195.45 Aligned_cols=221 Identities=15% Similarity=0.165 Sum_probs=165.2
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCC--------CCCCeeeecC-ceeEEccCCeEEEEEEE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSP--------AAAPSFIRAL-HDTTALEDEKVEFTVQV 476 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~--------~~~P~~~~~p-~~~~v~~g~~v~L~C~~ 476 (1101)
..|.|.+++..|+|.|+|.|.|..|... ...+.+.... ..+|.+...+ ....+..|+++.|.|.+
T Consensus 58 ~~L~I~~~~~~D~G~Y~C~~~n~~g~~~------s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~ 131 (312)
T 2y23_A 58 TKMTFKDLGMDDLGIYSCDVTDTDGIAS------SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQA 131 (312)
T ss_dssp EEEEESSCCGGGCEEEEEEESSSCCCCE------EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEE
T ss_pred EEEEECcCCccCCEEEEEEEEeCCCcEE------EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEE
Confidence 5899999999999999999999887432 1333322100 0044444433 37889999999999999
Q ss_pred e-ccCCCeEEEEECCEEeecCCcEEEEec--CCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEee-----------
Q psy8139 477 E-GIPTPKVSWYKDGFEIFSSRRQRIVTD--NDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRL----------- 542 (1101)
Q Consensus 477 ~-g~p~~~v~W~~~g~~~~~~~~~~~~~~--~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V----------- 542 (1101)
. +.|.+.+.|++++..+....++.+... ++...|.|.++...|+|.|+|.|.+..+.......+..
T Consensus 132 ~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (312)
T 2y23_A 132 EKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAE 211 (312)
T ss_dssp SCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHH
T ss_pred EeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhccccc
Confidence 9 899999999999999988776666543 55567999999999999999999875544433333310
Q ss_pred --------ccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC-eeEEEECCeecCCCCceEEEeecceEEEEEccCCC
Q psy8139 543 --------EAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP-TARWLHNGEPLTSGGRYEITHTDRYLNLRISDARR 613 (1101)
Q Consensus 543 --------~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~ 613 (1101)
..+|.+..+. ...+..|+.+.|.|.+.+.|.+ .+.|+++|..+..+.++.+. ++...|.|.++..
T Consensus 212 ~~~~~~~~~~~p~~~~~~----~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~ 285 (312)
T 2y23_A 212 FQRQEWIRKQGPHFVEYL----SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSK 285 (312)
T ss_dssp HHHHHHHHHHSSEEEEEE----EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSG
T ss_pred ccccchhhccCCceeecc----eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCH
Confidence 1123322111 1467889999999999999988 99999999988755555544 3467999999999
Q ss_pred CCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 614 ADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 614 ~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
.|.|.|+|.|.|..|....++.|.+
T Consensus 286 ~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 286 KDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp GGCEEEEEEEESTTCCEEEEEEECS
T ss_pred HHCEEEEEEEEcCCCceeeeeEEEe
Confidence 9999999999999999888877765
No 69
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.82 E-value=1.2e-19 Score=206.92 Aligned_cols=215 Identities=14% Similarity=0.096 Sum_probs=163.9
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
..+|.|.++++.|+|.|+|.|.|..+ .+.+.+.. +...| ...+.+|++++|.|.+.+.|.+.+
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~n~~~---------~~~l~V~~-------~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v 128 (363)
T 1wio_A 66 NFPLIIKNLKIEDSDTYICEVEDQKE---------EVQLLVFG-------LTANS-DTHLLQGQSLTLTLESPPGSSPSV 128 (363)
T ss_dssp CCCEEECSCCGGGCEEEEEEETTEEE---------EEEEEEEE-------EEESS-CSSEESBSCEEEEEECCTTCCCCE
T ss_pred eEEEEECCCCHHHCEEEEEEEEECCC---------cEEEEEEe-------CCCCC-ceEEecCCCEEEEEEcCCCCCCeE
Confidence 45799999999999999999988743 13333321 12222 235789999999999999999999
Q ss_pred EEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCC
Q psy8139 485 SWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGE 564 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~ 564 (1101)
.|++++..+. .. ...|.|.++...|+|.|+|.|.|..+.......|.|..+|..+ ....+..|+
T Consensus 129 ~W~~~~~~~~--------~~--~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~------~~~~~~~G~ 192 (363)
T 1wio_A 129 QCRSPRGKNI--------QG--GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS------SIVYKKEGE 192 (363)
T ss_dssp EEECSSSCEE--------EE--SSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE------EEEEEETBC
T ss_pred EEEcCCCccc--------cc--ceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC------CceEEecCC
Confidence 9999875431 12 2389999999999999999999987766666677777655432 344677899
Q ss_pred EEEEEEEEee-----cCCCeeEEEECCeecCC--------CCceEEEe----------ecceEEEEEccCCCCCCeEEEE
Q psy8139 565 IIKLKVSMAG-----MPPPTARWLHNGEPLTS--------GGRYEITH----------TDRYLNLRISDARRADRGEYQA 621 (1101)
Q Consensus 565 ~~~l~c~~~g-----~p~~~v~W~~~g~~l~~--------~~~~~~~~----------~~~~~sl~i~~l~~~~~y~y~c 621 (1101)
.+.|.|.+.+ .|.+.+.|+++|..+.. +..+.+.. .+...+|.|.++...|.|.|+|
T Consensus 193 ~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 272 (363)
T 1wio_A 193 QVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNL 272 (363)
T ss_dssp CEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEE
T ss_pred EEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEE
Confidence 9999998887 77899999999988765 34444432 2224589999999999999999
Q ss_pred EEEeC--CCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeec
Q psy8139 622 HGVNS--LGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSE 664 (1101)
Q Consensus 622 ~A~N~--~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~ 664 (1101)
.|.|. .|.......|.|...+ +..+.|+|..
T Consensus 273 ~a~n~~~~g~~~~~~~l~V~~v~------------g~~~~l~C~~ 305 (363)
T 1wio_A 273 TLALEAKTGKLHQEVNLVVMRAT------------QLQKNLTCEV 305 (363)
T ss_dssp EECBTTTTCCEEEEEEEEEEEEC------------CCSSSEEEEE
T ss_pred EEEEhhhcCeEEEEEeEEEEEec------------CCCeeEEEEE
Confidence 99999 9988888888877333 4556777764
No 70
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=3.3e-20 Score=208.84 Aligned_cols=234 Identities=19% Similarity=0.254 Sum_probs=144.6
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCC------------------CCCeeeec----Ccee
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPA------------------AAPSFIRA----LHDT 462 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~------------------~~P~~~~~----p~~~ 462 (1101)
...|.|.+++..|.|.|+|.|.|. |... ..+.+.+...+. .+|.+... +...
T Consensus 60 ~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~-----~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~ 133 (334)
T 1ry7_B 60 PQRLQVLNASHEDSGAYSCRQRLT-QRVL-----CHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLL 133 (334)
T ss_dssp -----------------------------------------------------------------CCCCSCCTTCCCCEE
T ss_pred cceEEEeecccccCEEEEEEEEeC-CeEE-----EEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeE
Confidence 468999999999999999999998 4322 223343332211 24444322 2346
Q ss_pred EEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcE-EEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEe
Q psy8139 463 TALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQ-RIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLR 541 (1101)
Q Consensus 463 ~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~-~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~ 541 (1101)
.+..|+++.|.|.+.|.|.+.+.|++++..+...... ......+...|.|.++...|+|.|+|.|.|..|.......|.
T Consensus 134 ~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 213 (334)
T 1ry7_B 134 AVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLD 213 (334)
T ss_dssp EEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEE
T ss_pred EecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEE
Confidence 7889999999999999999999999999877654322 111223345899999999999999999999999888888888
Q ss_pred eccCCcc--ccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEE----CCeecCCCCc--eEEEe-------ecceEEE
Q psy8139 542 LEAPPTI--RLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLH----NGEPLTSGGR--YEITH-------TDRYLNL 606 (1101)
Q Consensus 542 V~~~p~~--~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~----~g~~l~~~~~--~~~~~-------~~~~~sl 606 (1101)
|...+.. ......+....+..|+.+.|.|.+.|.|.+.+.|++ +|..+..+.. +.+.. ......|
T Consensus 214 V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 293 (334)
T 1ry7_B 214 VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVL 293 (334)
T ss_dssp EECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCE
T ss_pred EecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEE
Confidence 8763221 111112245678899999999999999999999999 6766654322 11111 1123479
Q ss_pred EEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCC
Q psy8139 607 RISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLP 644 (1101)
Q Consensus 607 ~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~ 644 (1101)
.|.++...|.|.|+|.|.|..|....+..|.|...|.+
T Consensus 294 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 294 SLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEE 331 (334)
T ss_dssp EECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC
T ss_pred EEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCC
Confidence 99999999999999999999999999999999876654
No 71
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.82 E-value=4.8e-19 Score=198.80 Aligned_cols=222 Identities=14% Similarity=0.162 Sum_probs=163.3
Q ss_pred cceEEEcCccCCccE-EEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccC-CC
Q psy8139 405 DTELMVSGLEPGWRY-QFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIP-TP 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y-~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p-~~ 482 (1101)
..+|.|.++++.|+| .|+|.|.|..|..... ....+. ..+|.+...+....+..|+++.|.|.+.|.| .+
T Consensus 88 ~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~-----~~~~v~---~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~ 159 (329)
T 3oq3_B 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQG-----IVRSHI---RKPPSCIPETYELGTHDKYGIDLYCGILYAKHYN 159 (329)
T ss_dssp TTEEEESSCCGGGGGCCEEEEEECTTSCEEEE-----EEEEEE---CCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCC
T ss_pred cceEEEcCCChHhCCCcEEEEEEeCCCceeeE-----EEEEEE---cCCCcEeccccceEEeCCCcEEEEeccCCCCCCc
Confidence 578999999999999 9999999988753221 111222 2334444444444567799999999999999 89
Q ss_pred eEEEEECCEEeecC-CcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC--CCceEEE----EEEeeccCCccccCCCCC
Q psy8139 483 KVSWYKDGFEIFSS-RRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR--AGHSITK----ARLRLEAPPTIRLPKQYE 555 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~-~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~--~g~~~~s----~~l~V~~~p~~~~~~~~~ 555 (1101)
.+.|++++..+... .++... + ..|.|.++...|+|.|+|.|.|. .|..... +.|.|..+|....+...+
T Consensus 160 ~i~W~k~~~~l~~~~~~~~~~--~--~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~ 235 (329)
T 3oq3_B 160 NITWYKNNQELIIDGTKYSQS--G--QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILD 235 (329)
T ss_dssp EEEEEETTEECCCSSSSEEEE--T--TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECC
T ss_pred eEEEEECCccCCCCCceEecC--C--CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecC
Confidence 99999999988533 333333 2 38999999999999999999997 6554433 678887766321111112
Q ss_pred CCeEEeeCCEEEEEEEEeecC---CC-eeEEEECCeec-CCCCceEEE--eec--ceEEEEEccCCCCCCe-EEEEEEEe
Q psy8139 556 DGLLFEMGEIIKLKVSMAGMP---PP-TARWLHNGEPL-TSGGRYEIT--HTD--RYLNLRISDARRADRG-EYQAHGVN 625 (1101)
Q Consensus 556 ~~~~v~~g~~~~l~c~~~g~p---~~-~v~W~~~g~~l-~~~~~~~~~--~~~--~~~sl~i~~l~~~~~y-~y~c~A~N 625 (1101)
....+..|+.+.|.|.+.+.| .+ .+.|+++|..+ ..+...... ..+ ....|.|.++...|.| .|+|.|.|
T Consensus 236 ~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N 315 (329)
T 3oq3_B 236 PKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHN 315 (329)
T ss_dssp SEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEEC
T ss_pred CeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEe
Confidence 345788899999999999998 67 88999998874 333322211 111 3678999999999999 99999999
Q ss_pred CCCCceeEEEEEE
Q psy8139 626 SLGEDVASFLVTV 638 (1101)
Q Consensus 626 ~~G~~~~s~~l~v 638 (1101)
..|....+..|.|
T Consensus 316 ~~G~~~~~~~l~v 328 (329)
T 3oq3_B 316 YYFDKTLTTTVVL 328 (329)
T ss_dssp SSCEEEEEEEEEE
T ss_pred cCCceEEEEEEEe
Confidence 9999888777765
No 72
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.82 E-value=4.9e-19 Score=196.37 Aligned_cols=210 Identities=23% Similarity=0.366 Sum_probs=152.5
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEE--ecCCeeEEEEeecCC-CCCEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIV--TDNDISTLIIHQAAL-MDEGEIKCT 526 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~~~l~I~~l~~-~d~g~Y~C~ 526 (1101)
..+|.|...|.+..+.+|++++|.|.+.|.|.+.+.|+++|..+... ++... ..+....|.|.++.. .|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 46889999999999999999999999999999999999999887544 33333 233347899999997 999999999
Q ss_pred EEeCCCceEEEEEEeeccC-------CccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCc-eEEE
Q psy8139 527 ATNRAGHSITKARLRLEAP-------PTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGR-YEIT 598 (1101)
Q Consensus 527 a~n~~g~~~~s~~l~V~~~-------p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~-~~~~ 598 (1101)
|.|..|.....+.|.|..+ |.+...+ ....+..|..+.|.|.+.|.|.+.+.|++++..+..... ..+.
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~---~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~ 159 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQLPSGFPNIDMGP---QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIK 159 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGCCTTCCEEEECC---CCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEE
T ss_pred EECCCCeEEEEEEEEEeccccCCCCCCeeecCC---ccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEE
Confidence 9999998877888888765 3333322 345778899999999999999999999999988864321 1111
Q ss_pred eecceEEEEEccCCCCCCeEEEEEEEeCCCCceeE-EEEEEecCCCCCCcc----EEEEecCCeEEEEeec
Q psy8139 599 HTDRYLNLRISDARRADRGEYQAHGVNSLGEDVAS-FLVTVTDRPLPPGKA----KVVMTLGKSVTLSWSE 664 (1101)
Q Consensus 599 ~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s-~~l~v~~~P~~P~~~----~~~~~~~~sv~lsW~~ 664 (1101)
. ...+.|.|.++...|.|.|+|.|.|..|..... ..+.|...+.+|.-. ......+..+.|.|..
T Consensus 160 ~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~ 229 (304)
T 2yd9_A 160 Q-LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVA 229 (304)
T ss_dssp E-CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEE
T ss_pred e-CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEE
Confidence 1 224589999999999999999999999876543 555554332222100 0123456678888875
No 73
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.82 E-value=1e-18 Score=194.60 Aligned_cols=223 Identities=15% Similarity=0.159 Sum_probs=165.4
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~ 482 (1101)
.+.+|.|.+++..|+|.|+|.+.+..+... +..+.+.+ ..+|.+...+....+..+..+.+.|.+ .+.|.+
T Consensus 77 ~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~----~~~~~l~v----~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~ 148 (313)
T 4fqp_A 77 RNASLRMFGLRVEDEGNYTCLFVTFPQGSR----SVDIWLRV----LAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPA 148 (313)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEECSSSCEE----EEEEEECC----BBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCC
T ss_pred cceEEEECcCChhhCEEEEEEEeeccCcce----eeeeeeee----ccCCcceecccceEeecCceEEEEEEccCccCCc
Confidence 346799999999999999999875433221 12233332 356666666667777888899999976 478999
Q ss_pred eEEEEECCEEeecCCcEEEEecCC---eeEEEEeecCCCCCEEEEEEEEeCCCceEE--EEEEeeccCCccccCCCCCCC
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDND---ISTLIIHQAALMDEGEIKCTATNRAGHSIT--KARLRLEAPPTIRLPKQYEDG 557 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~~---~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~--s~~l~V~~~p~~~~~~~~~~~ 557 (1101)
.+.|++++..+...........+. .+.|.|......|.|.|+|.|.|..+.... +..|.|..+|.+...+. ..
T Consensus 149 ~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~--~~ 226 (313)
T 4fqp_A 149 QITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGY--DN 226 (313)
T ss_dssp EEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECC--CS
T ss_pred EEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccc--cc
Confidence 999999987665432222211221 236888899999999999999998766544 45677777787644332 23
Q ss_pred eEEeeCCEEEEEEEEeecCCC-eeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 558 LLFEMGEIIKLKVSMAGMPPP-TARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 558 ~~v~~g~~~~l~c~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
..+..|+.+.|.|.+.|.|.| .+.|+++|..+.... .. ...+|.|.++...|.|.|+|.|.|..|..+.+..|
T Consensus 227 ~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~--~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 300 (313)
T 4fqp_A 227 NWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA--VA----QGAQLLIRPVDKPINTTLICNVTNALGARQAELTV 300 (313)
T ss_dssp CEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EE----ETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEE
T ss_pred eeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce--EE----eCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEE
Confidence 356678899999999999988 699999998886532 11 14579999999999999999999999999889999
Q ss_pred EEecCC
Q psy8139 637 TVTDRP 642 (1101)
Q Consensus 637 ~v~~~P 642 (1101)
.|...|
T Consensus 301 ~V~~~P 306 (313)
T 4fqp_A 301 QVKEGP 306 (313)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 998653
No 74
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.82 E-value=6.2e-19 Score=220.56 Aligned_cols=136 Identities=29% Similarity=0.379 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8139 38 IRSKTIVIQKYFRGYLLMRKERQEYLAMKSSAVKIQEWYRNLQCMRQARQQYLALKHATLKQREEFLKLKHATIAIQTLY 117 (1101)
Q Consensus 38 ~~~aa~~IQ~~~Rg~~~r~~~r~~~~~~~~aa~~iQ~~~R~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~iQ~~~ 117 (1101)
+..+|+.||++||||+ +|++|.+++.+++.||++|||+++|+.++.. +...||+.||++|
T Consensus 767 l~~aa~~IQa~~Rg~l----~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~l----------------r~~~AAi~IQs~~ 826 (1080)
T 2dfs_A 767 LRAACIRIQKTIRGWL----MRKKYMRMRRAAITIQRYVRGHQARCYATFL----------------RRTRAAIIIQKFQ 826 (1080)
T ss_dssp HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HHHHhhhhHHHHHHHHHHHHHHHHhhccccc----------------ccchhHHHHHHHH
Confidence 3456666666666666 6666666666666666666666665544322 3455666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8139 118 KAKLLMKRDRAAYTELKQACVSVQQRWRANLTMRKQRAHFLLMKQKASVIQQWYRNTKLMRLEASYLHELKAATITIQRR 197 (1101)
Q Consensus 118 R~~~~~~~~r~~~~~~~~aa~~iQ~~~R~~~~r~~~r~~~~~~~~aa~~IQ~~~R~~~~rr~~~~~~~~~~~aa~~iQ~~ 197 (1101)
| ++..|+.|...+.+++.||++|||+++|+.++. .+...||+.||++|||+++|+. +.+.+.|++.||+.
T Consensus 827 R----g~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~--lr~~~aav~IQ~~~Rg~l~R~~----y~~~~~aai~iQs~ 896 (1080)
T 2dfs_A 827 R----MYVVRKRYQCMRDATIALQALLRGYLVRNKYQM--MLREHKSIIIQKHVRGWLARVH----YHRTLKAIVYLQCC 896 (1080)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHTTTHHHHH----TTTTHHHHHHHHHH
T ss_pred h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH----HHHHHhhHHHHHHH
Confidence 6 345555666666666666666666666655443 2223466666666666666554 33345566666666
Q ss_pred HHHHHH
Q psy8139 198 YRANVA 203 (1101)
Q Consensus 198 ~Rg~~~ 203 (1101)
|||+++
T Consensus 897 ~R~~la 902 (1080)
T 2dfs_A 897 YRRMMA 902 (1080)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666665
No 75
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.81 E-value=1.9e-18 Score=180.76 Aligned_cols=176 Identities=25% Similarity=0.435 Sum_probs=143.9
Q ss_pred eEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCC--CceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEE
Q psy8139 558 LLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSG--GRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFL 635 (1101)
Q Consensus 558 ~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~ 635 (1101)
+.+..|+.+.|.|.+.|.|.+.+.|+++|..+... .++.+...+....|.|.++...|.|.|+|.|.|..|.......
T Consensus 28 ~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 107 (215)
T 3mtr_A 28 VYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 107 (215)
T ss_dssp EEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEE
Confidence 57888999999999999999999999999998765 4566666666889999999999999999999999999988999
Q ss_pred EEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCC
Q psy8139 636 VTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDG 715 (1101)
Q Consensus 636 l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~ 715 (1101)
+.+..+|.+|..+.+. ....++.|+|.+|. .++
T Consensus 108 l~v~~~P~~p~~~~~~-~~~~~~~l~w~~p~----------------------------------------------~~~ 140 (215)
T 3mtr_A 108 LVQADTPSSPSIDQVE-PYSSTAQVQFDEPE----------------------------------------------ATG 140 (215)
T ss_dssp EEECCCCCCCEEEEEE-EETTEEEEEEECCS----------------------------------------------CCC
T ss_pred EEECCCCCCCcceEEE-EecceEEEEEecCC----------------------------------------------ccC
Confidence 9999999999776653 45566677776554 344
Q ss_pred CCCcceEEEEEEeCCCCCceeeccc---ccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcE
Q psy8139 716 GSPVLGYLVEHRRTGSPYWVRASPH---MVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPL 780 (1101)
Q Consensus 716 ~~~i~~Y~V~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~ 780 (1101)
+.++.+|.|+|+..+...|...... ......++|.+|.|++.|.|+|.|.|.+|.|++|....+.
T Consensus 141 ~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 141 GVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp SSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred CCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 5678888888888887778764321 1223889999999999999999999999999888666544
No 76
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.81 E-value=4.4e-19 Score=207.90 Aligned_cols=253 Identities=19% Similarity=0.225 Sum_probs=168.4
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEec-cCCC-
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEG-IPTP- 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g-~p~~- 482 (1101)
..+|.|.++++.|+|.|+|.|.|..|... +....+.+. .+..+|.+...+....+..|+.+.|.|.+.| .|.+
T Consensus 74 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~----~~~~~l~V~-~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~ 148 (438)
T 1qgc_4 74 DFTLTIDPVEADDVATYYCQQSNEVPLTF----GAGTKLDLK-RADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDI 148 (438)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSTTCCB----CCCEEEEEC-CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCE
T ss_pred cEEEEeCCCcCcCCeeEEEEEecCCCccc----cCceeEEec-CCCCCCEEEecCCChhhccCCceEEEEEEccccCCCc
Confidence 35799999999999999999999876321 223444443 2234677665444444557889999999987 6777
Q ss_pred eEEEEECCEEeecCCcE--EEEec-CC----eeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCC
Q psy8139 483 KVSWYKDGFEIFSSRRQ--RIVTD-ND----ISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYE 555 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~--~~~~~-~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~ 555 (1101)
.++|+++|..+...... ..... ++ .+.|.|.++...|+|.|+|.|.|..|.......+.+..++..... +
T Consensus 149 ~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~---~ 225 (438)
T 1qgc_4 149 NVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVE---S 225 (438)
T ss_dssp EEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEE---E
T ss_pred EEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEec---C
Confidence 89999999987654111 11111 11 247999999999999999999999887544444433222221111 1
Q ss_pred CCeEEeeCCEEEEEEEEeecC--CCeeEEEEC--CeecC-----------------CCCceEEEee--cceEEEEEccCC
Q psy8139 556 DGLLFEMGEIIKLKVSMAGMP--PPTARWLHN--GEPLT-----------------SGGRYEITHT--DRYLNLRISDAR 612 (1101)
Q Consensus 556 ~~~~v~~g~~~~l~c~~~g~p--~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~sl~i~~l~ 612 (1101)
....+..|+.+.|.|.+.|.| .+.+.|+++ +..+. ...++.+... ....+|.|.++.
T Consensus 226 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 305 (438)
T 1qgc_4 226 GGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLR 305 (438)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCC
Confidence 244788999999999999988 689999986 43221 1234554432 335689999999
Q ss_pred CCCCeEEEEEEEeCCC-----CceeEEEEEEecCC-CCCCccEE----EEecCCeEEEEeecC
Q psy8139 613 RADRGEYQAHGVNSLG-----EDVASFLVTVTDRP-LPPGKAKV----VMTLGKSVTLSWSEP 665 (1101)
Q Consensus 613 ~~~~y~y~c~A~N~~G-----~~~~s~~l~v~~~P-~~P~~~~~----~~~~~~sv~lsW~~p 665 (1101)
..|.|.|+|.|.|..| .......+.|...+ .+|.-... ....+.+++|.|...
T Consensus 306 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 368 (438)
T 1qgc_4 306 SADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVK 368 (438)
T ss_dssp GGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEE
T ss_pred hhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEec
Confidence 9999999999999554 22234567776432 23311111 123467899999853
No 77
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.81 E-value=3e-18 Score=178.81 Aligned_cols=189 Identities=26% Similarity=0.403 Sum_probs=150.7
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEe-cCCeeEEEEeec-CCCCCEEEEEEEE
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVT-DNDISTLIIHQA-ALMDEGEIKCTAT 528 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~-~~~~~~l~I~~l-~~~d~g~Y~C~a~ 528 (1101)
.+|.|...|.+..+.+|+++.|.|.+.|.|.+.+.|++++..+.......... .+....|.|.++ ...|+|.|+|.|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 57888888999999999999999999999999999999999887654333332 234568999999 5999999999999
Q ss_pred eCCCceEEEEEEeeccC-------CccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCC---CceEEE
Q psy8139 529 NRAGHSITKARLRLEAP-------PTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSG---GRYEIT 598 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~-------p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~---~~~~~~ 598 (1101)
|..|.....+.|.|..+ |.+...+ ....+..|..+.|.|.+.|.|.+.+.|+++|..+... .++...
T Consensus 85 n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~---~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~ 161 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQIPRGFPTIDMGP---QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQL 161 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGCCTTCCEEEECC---CCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEE
T ss_pred cCCCcEEEEEEEEEeccCccCCCcceeecCC---cceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEE
Confidence 99998888888888764 3333222 2346778999999999999999999999999988753 455555
Q ss_pred eecceEEEEEccCCCCCCeEEEEEEEeCCCCce-eEEEEEEecCC
Q psy8139 599 HTDRYLNLRISDARRADRGEYQAHGVNSLGEDV-ASFLVTVTDRP 642 (1101)
Q Consensus 599 ~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~-~s~~l~v~~~P 642 (1101)
..+....|.|.++...|.|.|+|.|.|..|... ..+.+.+...|
T Consensus 162 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 162 RSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 555678999999999999999999999999764 45666666443
No 78
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.81 E-value=4.6e-19 Score=200.84 Aligned_cols=226 Identities=15% Similarity=0.170 Sum_probs=138.5
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-----ecc
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-----EGI 479 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-----~g~ 479 (1101)
...|.|.+++..|+|.|+|.|.|..|... ..+.+.+...+...+.....|....+..|+++.|.|.+ .|.
T Consensus 78 ~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~-----~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~ 152 (349)
T 4dep_C 78 KDVLWFRPTLLNDTGNYTCMLRNTTYCSK-----VAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSS 152 (349)
T ss_dssp TTEEEESSCCGGGCEEEEEEEECSSCEEE-----EEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTT
T ss_pred CCEEEEccCChhhCEEEEEEEecCCceEE-----EEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCC
Confidence 46899999999999999999999776543 22445554333322222344567788999999999985 788
Q ss_pred CCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCC-Cce---EEEEEEeecc------CCccc
Q psy8139 480 PTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRA-GHS---ITKARLRLEA------PPTIR 549 (1101)
Q Consensus 480 p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~-g~~---~~s~~l~V~~------~p~~~ 549 (1101)
|.+.+.|++++..+.....+ ...+ ..|.|.++...|+|.|+|.|.|.. |.. .....|.|.. +|.+.
T Consensus 153 p~~~v~W~k~~~~l~~~~~~--~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~ 228 (349)
T 4dep_C 153 VKPTITWYMGCYKIQNFNNV--IPEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIH 228 (349)
T ss_dssp SCCEEEEEETTEECCSCSSE--EEET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC
T ss_pred CCceEEEeeCCEECCCccce--eecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEe
Confidence 99999999999988654333 2233 389999999999999999999987 443 3456677766 34443
Q ss_pred cCCCCCCCeEEeeCCEEEEEEEEe----ecCCCeeEEEECCeecCC-CCceEEEe---------ecceEEEEEccCCCCC
Q psy8139 550 LPKQYEDGLLFEMGEIIKLKVSMA----GMPPPTARWLHNGEPLTS-GGRYEITH---------TDRYLNLRISDARRAD 615 (1101)
Q Consensus 550 ~~~~~~~~~~v~~g~~~~l~c~~~----g~p~~~v~W~~~g~~l~~-~~~~~~~~---------~~~~~sl~i~~l~~~~ 615 (1101)
.++. .....+..|+.+.|.|.+. +.|.+.+.|+++|..+.. ..++.+.. .....+|.|.++...|
T Consensus 229 ~~~~-~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 307 (349)
T 4dep_C 229 SPND-HVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSED 307 (349)
T ss_dssp -----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC---------
T ss_pred cCCC-ceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHH
Confidence 3221 1112577899999999999 568899999999988765 22222210 1114459999999999
Q ss_pred C-eEEEEEEEeCCCCceeEEEEEEec
Q psy8139 616 R-GEYQAHGVNSLGEDVASFLVTVTD 640 (1101)
Q Consensus 616 ~-y~y~c~A~N~~G~~~~s~~l~v~~ 640 (1101)
. |.|+|.|.|..|.......|.|..
T Consensus 308 ~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 308 LKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp ----CEEEEECSSCEEEEECC-----
T ss_pred cCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 9 999999999999988888888753
No 79
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.80 E-value=3.1e-18 Score=178.76 Aligned_cols=189 Identities=24% Similarity=0.408 Sum_probs=153.2
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEee-cCCcEEEEe-cCCeeEEEEeecCC-CCCEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIF-SSRRQRIVT-DNDISTLIIHQAAL-MDEGEIKCT 526 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~-~~~~~~~~~-~~~~~~l~I~~l~~-~d~g~Y~C~ 526 (1101)
..||.|...|.+..+..|++++|.|.+.|.|.+.+.|++++..+. ...++.+.. .++...|.|.++.. .|+|.|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 368899999999999999999999999999999999999999887 445555544 35557999999999 999999999
Q ss_pred EEeCCCc-eEEEEEEeeccC-------CccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCC-CceEE
Q psy8139 527 ATNRAGH-SITKARLRLEAP-------PTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSG-GRYEI 597 (1101)
Q Consensus 527 a~n~~g~-~~~s~~l~V~~~-------p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~-~~~~~ 597 (1101)
+.|..|. ......|.|..+ |.+...+ ....+..|..+.|.|.+.|.|.+.+.|++++..+... ..+.+
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~---~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~ 160 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGP---GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSL 160 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECC---CCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEE
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCC---CceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEc
Confidence 9999988 667788888765 3333332 3456778999999999999999999999999988753 33433
Q ss_pred EeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeE-EEEEEecCCCCC
Q psy8139 598 THTDRYLNLRISDARRADRGEYQAHGVNSLGEDVAS-FLVTVTDRPLPP 645 (1101)
Q Consensus 598 ~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s-~~l~v~~~P~~P 645 (1101)
. .+.|.|.++...|.|.|+|.|.|..|..... +.|.|...+..|
T Consensus 161 ~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~ 205 (212)
T 2yd1_A 161 K----DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGT 205 (212)
T ss_dssp E----TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C-
T ss_pred c----CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccccc
Confidence 2 3489999999999999999999999988654 789998766544
No 80
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.80 E-value=5.7e-18 Score=186.30 Aligned_cols=262 Identities=22% Similarity=0.295 Sum_probs=192.0
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEE-CCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYK-DGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
.+|.+...|.++.+..|+.++|.|.+.+.|. .+.|++ +|..+....++.+...+....|.|.++...|+|.|+|.+.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 5678888899999999999999999999875 899999 77777777777777777778999999999999999999999
Q ss_pred CCCceE-EEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCC--CCceEEEeecceEEE
Q psy8139 530 RAGHSI-TKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTS--GGRYEITHTDRYLNL 606 (1101)
Q Consensus 530 ~~g~~~-~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~--~~~~~~~~~~~~~sl 606 (1101)
..|... ....|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+.. ..+|
T Consensus 82 ~~g~~~~~~~~l~v~~~~~~~~~~---~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~~L 155 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQKLTFREVV---SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA---NNNL 155 (291)
T ss_dssp SSSCEEEEEEEEEEECCCBCCSCC---CSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECT---TSCE
T ss_pred ccCceEEEEEEEEecCCcceEeCC---CChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEcc---CCCE
Confidence 988764 45678888777765443 345788999999999999999999999999887754 33333322 4579
Q ss_pred EEccCCCCCCeEEEEEEEeCCCCce--eEEEEEEecCCCCCCcc---EEEEecCCeEEEEeecCCCCCCcccceeEEEEE
Q psy8139 607 RISDARRADRGEYQAHGVNSLGEDV--ASFLVTVTDRPLPPGKA---KVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYF 681 (1101)
Q Consensus 607 ~i~~l~~~~~y~y~c~A~N~~G~~~--~s~~l~v~~~P~~P~~~---~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~ 681 (1101)
.|.++...|.|.|+|.|.|..+... ....+.+..+|...... ......+..+.|.|...+.+
T Consensus 156 ~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p------------- 222 (291)
T 2wim_A 156 QILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSP------------- 222 (291)
T ss_dssp EETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBS-------------
T ss_pred EEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCC-------------
Confidence 9999999999999999999886543 34556666665432211 22334577899999853211
Q ss_pred cCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEE
Q psy8139 682 RPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFR 761 (1101)
Q Consensus 682 ~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 761 (1101)
...+.|.... .++. .+.. .... .....++|.++.......|.
T Consensus 223 ---------------------~p~v~W~~~g----~~~~---------~~~~-~~~~---~~~~~L~i~~~~~~d~G~Y~ 264 (291)
T 2wim_A 223 ---------------------EPAISWFRNG----KLIE---------ENEK-YILK---GSNTELTVRNIINSDGGPYV 264 (291)
T ss_dssp ---------------------CCEEEEEETT----EECC---------CTTT-EEEC---STTCEEEEESCCSTTCEEEE
T ss_pred ---------------------CCeEEEEECC----EECc---------CCcc-EEEc---CCccEEEEeeCCcccCEEEE
Confidence 1246776421 1110 0001 1111 34467899999999999999
Q ss_pred EEEEcCCcc
Q psy8139 762 ITAENVVGF 770 (1101)
Q Consensus 762 V~A~n~~G~ 770 (1101)
|.|.|..|.
T Consensus 265 C~a~N~~G~ 273 (291)
T 2wim_A 265 CRATNKAGE 273 (291)
T ss_dssp EEEEETTEE
T ss_pred EEEEECCCc
Confidence 999999997
No 81
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.80 E-value=1.5e-18 Score=195.03 Aligned_cols=221 Identities=19% Similarity=0.215 Sum_probs=163.8
Q ss_pred ccceEEEcCccCCccEEEEEEEE-ecCCCCCCCCCCcceEEEeccCCCCCCee--eecCceeEEccC---CeEEEEEE-E
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAE-NVVGFSEPGPLSEPLTVTYQRSPAAAPSF--IRALHDTTALED---EKVEFTVQ-V 476 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~-n~~G~~~~s~~s~~vtv~~~~~~~~~P~~--~~~p~~~~v~~g---~~v~L~C~-~ 476 (1101)
.+.+|.|.++++.|+|.|+|.+. +..|.. +..+.+.+. .+|.+ ...+..+.+..| +.+.|.|. +
T Consensus 90 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~-----~~~~~l~V~----~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~ 160 (331)
T 3u83_A 90 TDGTIRLSRLELEDEGVYICEFATFPTGNR-----ESQLNLTVM----AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSA 160 (331)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEEETTEEE-----EEEEEEEEE----BCCEEEEEECSSCEEECTTCCCCEEEEEEEEE
T ss_pred CCceEEEcccCcccCcEEEEEEEecCCCcc-----EEEEEEEEe----cCCcceeecCCCceeecCCCccceEEEEEEec
Confidence 45679999999999999999854 444432 233445444 34444 235667778888 78999997 8
Q ss_pred eccCCCeEEEEEC--CEEeecCCcEEEEecCC----eeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCcccc
Q psy8139 477 EGIPTPKVSWYKD--GFEIFSSRRQRIVTDND----ISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRL 550 (1101)
Q Consensus 477 ~g~p~~~v~W~~~--g~~~~~~~~~~~~~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~ 550 (1101)
.+.|.+.+.|+++ +..... .....++ .+.|.|.++...|+|.|+|.|.|..|....++.|.|..+|.+..
T Consensus 161 ~~~p~~~i~W~~~~~~~~~~~----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~ 236 (331)
T 3u83_A 161 NGKPPSVVSWETRLKGEAEYQ----EIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTI 236 (331)
T ss_dssp EEBSCCEEEEEESSCCEEEEE----EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEE
T ss_pred CCcCCceEEEEcCCCCccccc----eeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEE
Confidence 8999999999995 322211 1111111 13688888899999999999999999888888999988887653
Q ss_pred CCCCCCCeEEeeCCEEEEEEEEeecCCCe-eEEEECCeecCCCCceEEEeecceEEEEEc-cCCCCCCeEEEEEEEeCCC
Q psy8139 551 PKQYEDGLLFEMGEIIKLKVSMAGMPPPT-ARWLHNGEPLTSGGRYEITHTDRYLNLRIS-DARRADRGEYQAHGVNSLG 628 (1101)
Q Consensus 551 ~~~~~~~~~v~~g~~~~l~c~~~g~p~~~-v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~-~l~~~~~y~y~c~A~N~~G 628 (1101)
.+. ....+..|+.+.|.|.+.+.|.+. +.|++++..+.... .. ...+|.|. ++...|.|.|+|.|.|..|
T Consensus 237 ~~~--~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~~----~~~~L~i~~~v~~~d~G~Y~C~a~N~~G 308 (331)
T 3u83_A 237 EGF--DGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV--EA----QNRTLFFKGPINYSLAGTYICEATNPIG 308 (331)
T ss_dssp ECC--CSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EE----ETTEEEECSCCCGGGCEEEEEEEEETTE
T ss_pred ecC--CCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc--ee----cCcEEEEeCCCccccCeEEEEEEEeccc
Confidence 322 223467799999999999999998 99999998876542 12 14579999 8999999999999999999
Q ss_pred CceeEEEEEEecCCCCC
Q psy8139 629 EDVASFLVTVTDRPLPP 645 (1101)
Q Consensus 629 ~~~~s~~l~v~~~P~~P 645 (1101)
....+..|.|...+...
T Consensus 309 ~~~~~~~l~V~~~~~~~ 325 (331)
T 3u83_A 309 TRSGQVEVNITEAAALE 325 (331)
T ss_dssp EEEEEEEECCBC-----
T ss_pred cceEEEEEEEeccchhh
Confidence 99889999888766543
No 82
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.79 E-value=8.8e-18 Score=171.88 Aligned_cols=178 Identities=22% Similarity=0.351 Sum_probs=147.8
Q ss_pred CCeeeecCceeEEcc-CCeEEEEEEEeccCC--CeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 452 APSFIRALHDTTALE-DEKVEFTVQVEGIPT--PKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~-g~~v~L~C~~~g~p~--~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
+|.+.. +....+.. |+++.|.|.+.+.|. +.+.|++++..+....... ....|.|.++...|+|.|+|.+.
T Consensus 3 ~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~ 76 (190)
T 2wv3_A 3 EPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYH 76 (190)
T ss_dssp CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEE
Confidence 566655 44556666 999999999999887 7899999999886543321 34689999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEE--CCeecC---CCCceEEEeecce
Q psy8139 529 NRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLH--NGEPLT---SGGRYEITHTDRY 603 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~--~g~~l~---~~~~~~~~~~~~~ 603 (1101)
|. |.......|.|..+|.+...+. ...+..|..+.|.|.+.|.|.+.+.|++ +|..+. .+.++.+...+..
T Consensus 77 n~-~~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~ 152 (190)
T 2wv3_A 77 FV-SAPKANATIEVKAAPDITGHKR---SENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENY 152 (190)
T ss_dssp ET-TEEEEEEEEEEECCCEEEEECS---EEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSE
T ss_pred eC-CcccccEEEEEecCCcccccCC---cceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCe
Confidence 99 8888889999999988765443 3468899999999999999999999999 777664 4566777666667
Q ss_pred EEEEEccCC-CCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy8139 604 LNLRISDAR-RADRGEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 604 ~sl~i~~l~-~~~~y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
+.|.|.++. ..|.|.|+|.|.|..|....+..|.|.
T Consensus 153 ~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 153 TELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 799999999 799999999999999998888887774
No 83
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.79 E-value=1.6e-18 Score=193.42 Aligned_cols=268 Identities=17% Similarity=0.239 Sum_probs=186.5
Q ss_pred CCCCCeeeecCceeEEccCCeEEEEEEEecc-CCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEE
Q psy8139 449 PAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTA 527 (1101)
Q Consensus 449 ~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a 527 (1101)
+..+|.|.. |.+..+.+|+++.|.|.+.+. |.+.+.|+++|..+....++.+. .+...|.|.++...|+|.|+|.|
T Consensus 4 ~~~~P~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~ 80 (317)
T 2y25_A 4 PFTGPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVIL 80 (317)
T ss_dssp SSSCCEEEE-EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEE
T ss_pred ccCCCcEee-eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEEE
Confidence 356788874 446889999999999999887 78899999999998766655543 33469999999999999999999
Q ss_pred EeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEee----------cCCCeeEEEECCeecCCCCceEE
Q psy8139 528 TNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAG----------MPPPTARWLHNGEPLTSGGRYEI 597 (1101)
Q Consensus 528 ~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g----------~p~~~v~W~~~g~~l~~~~~~~~ 597 (1101)
.|..|.......|.|..+|.+...+. ...+..|..+.|.|.+.+ .|.+.+.|+++|..+..+.++.+
T Consensus 81 ~n~~g~~~~~~~l~v~~~~~~~~~~~---~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 157 (317)
T 2y25_A 81 KDDRGKDKSRLKLVDEAFKELMMEVC---KKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKT 157 (317)
T ss_dssp ESSSCEEEEEECCSTHHHHHHHHHHH---HHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEE
T ss_pred ECCCCcEEEEEEEEEecCccccccCC---ceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEE
Confidence 99999877777777665443321110 112234555556665555 68999999999999988777877
Q ss_pred EeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEec-----------------CCCCCC-----ccEEEEecC
Q psy8139 598 THTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTD-----------------RPLPPG-----KAKVVMTLG 655 (1101)
Q Consensus 598 ~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~-----------------~P~~P~-----~~~~~~~~~ 655 (1101)
...+....|.|.++...|.|.|+|.|.|..|....+..+.+.. ...+|. .-......+
T Consensus 158 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 237 (317)
T 2y25_A 158 GVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEG 237 (317)
T ss_dssp EECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETT
T ss_pred eccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcC
Confidence 7777778899999999999999999999988877776665431 111110 112344567
Q ss_pred CeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCce
Q psy8139 656 KSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWV 735 (1101)
Q Consensus 656 ~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~ 735 (1101)
..+.|.|...+.+ ...+.|.... .++. .+.. .
T Consensus 238 ~~~~l~C~~~g~p----------------------------------~p~i~W~~~g----~~~~---------~~~~-~ 269 (317)
T 2y25_A 238 KALNLTCNVWGDP----------------------------------PPEVSWLKNE----KALA---------SDDH-C 269 (317)
T ss_dssp SBBCEEEEEECSS----------------------------------CCEEEEEESS----SEEC---------CCSS-E
T ss_pred CEEEEEEEEecCC----------------------------------CCEEEEEECC----EeCC---------CCCc-E
Confidence 7888888753211 1246776421 1110 0111 1
Q ss_pred eecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 736 RASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 736 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
.+....+....++|.++.+.....|.|.|.|..|.
T Consensus 270 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 304 (317)
T 2y25_A 270 NLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGS 304 (317)
T ss_dssp EECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEE
T ss_pred EEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCe
Confidence 11111133458899999999999999999999997
No 84
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.79 E-value=1.3e-17 Score=208.67 Aligned_cols=145 Identities=24% Similarity=0.285 Sum_probs=116.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8139 3 QCRSDYLNLRAKTILIQTLWRSKLAMRRDEREFCMIRSKTIVIQKYFRGYLLMRKERQEYLAMKSSAVKIQEWYRNLQCM 82 (1101)
Q Consensus 3 ~~r~~~~~~~~aa~~iQ~~~Rg~~~r~~~~~~~~~~~~aa~~IQ~~~Rg~~~r~~~r~~~~~~~~aa~~iQ~~~R~~~~r 82 (1101)
+.+++...+..+|+.||+.||||++|+++. .++.||+.||++|||+++|++.+ +.+...||+.||++|||+++|
T Consensus 759 LE~~R~~~l~~aa~~IQa~~Rg~l~Rk~~~----~~r~aai~IQ~~~Rg~~aR~~~~--~lr~~~AAi~IQs~~Rg~~~R 832 (1080)
T 2dfs_A 759 LEKIRADKLRAACIRIQKTIRGWLMRKKYM----RMRRAAITIQRYVRGHQARCYAT--FLRRTRAAIIIQKFQRMYVVR 832 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHhhccc--ccccchhHHHHHHHHhhHHHH
Confidence 456667788899999999999999999765 56789999999999999554322 234468999999999999985
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8139 83 RQARQQYLALKHATLKQREEFLKLKHATIAIQTLYKAKLLMKRDRAAYTEL--KQACVSVQQRWRANLTMRKQRAHFLLM 160 (1101)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~iQ~~~R~~~~~~~~r~~~~~~--~~aa~~iQ~~~R~~~~r~~~r~~~~~~ 160 (1101)
+. |.+...+++.||++|||++++ +.|..+ ..+++.||++|||+++|+. |.+.
T Consensus 833 k~------------------y~~lr~aai~IQs~~Rg~laR----r~~~~lr~~~aav~IQ~~~Rg~l~R~~----y~~~ 886 (1080)
T 2dfs_A 833 KR------------------YQCMRDATIALQALLRGYLVR----NKYQMMLREHKSIIIQKHVRGWLARVH----YHRT 886 (1080)
T ss_dssp HH------------------HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTTHHHHH----TTTT
T ss_pred HH------------------HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH
Confidence 54 456668999999999977544 444433 3579999999999996554 4556
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy8139 161 KQKASVIQQWYRNTKLMRL 179 (1101)
Q Consensus 161 ~~aa~~IQ~~~R~~~~rr~ 179 (1101)
+.|++.||++|||+++|+.
T Consensus 887 ~~aai~iQs~~R~~laRr~ 905 (1080)
T 2dfs_A 887 LKAIVYLQCCYRRMMAKRE 905 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHH
Confidence 7899999999999999886
No 85
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.78 E-value=1.9e-18 Score=177.16 Aligned_cols=185 Identities=26% Similarity=0.400 Sum_probs=152.5
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeec-CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFS-SRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~-~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
..+|.|...+.++.+..|++++|.|.+.+.|.+.+.|++++..+.. ..++.+...+. .|.|.++...|+|.|+|.+.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEEE
Confidence 3567777788888999999999999999999999999999998765 34555544443 79999999999999999999
Q ss_pred eCCCce-EEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEE
Q psy8139 529 NRAGHS-ITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLR 607 (1101)
Q Consensus 529 n~~g~~-~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~ 607 (1101)
|..|.. .....|.|..+|.+..++. ...+..|..+.|.|.+.+.|.+.+.|++++..+....++.+.. .+.|.
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~---~~~L~ 156 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPKITRPPI---NVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLE---SGSLR 156 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEEECCC---CEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECT---TSCEE
T ss_pred cCCCceeEeEEEEEEEeCCccccCCc---ceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEec---CCcEE
Confidence 998874 4567888888887765543 4578899999999999999999999999999988766655443 34799
Q ss_pred EccCCCCCCeEEEEEEEeCCCCc-eeEEEEEEecCC
Q psy8139 608 ISDARRADRGEYQAHGVNSLGED-VASFLVTVTDRP 642 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~N~~G~~-~~s~~l~v~~~P 642 (1101)
|.++...|.|.|+|.|.|..|.. +....|.|..+|
T Consensus 157 i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 157 IHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999999999999999977 446778877554
No 86
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.78 E-value=5e-18 Score=175.82 Aligned_cols=178 Identities=18% Similarity=0.221 Sum_probs=138.1
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEe-ccCCCeEEEEECCEEeecCCcEEEEecC--CeeEEEEeecCCCCCEEEEEEEE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVE-GIPTPKVSWYKDGFEIFSSRRQRIVTDN--DISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~-g~p~~~v~W~~~g~~~~~~~~~~~~~~~--~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.|.|.. +.++.+.+|+.+.|.|.+. +.|.|.|+|+++|..+..+.++.+...+ +..+|.|.++...|+|.|+|.|.
T Consensus 3 ~p~~~~-~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCE-EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeec-CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 455544 3478899999999999996 4799999999999999877777666554 55689999999999999999999
Q ss_pred eCCCceEEEEEEeec---------------------cCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCCeeEEEECC
Q psy8139 529 NRAGHSITKARLRLE---------------------APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPPTARWLHNG 586 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~---------------------~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~~v~W~~~g 586 (1101)
| |.......+.+. .+|.+..++ ...+..|..+.|.|.+.|. |.|.+.|+++|
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~----~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g 155 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL----SWEVTGECNVLLKCKVANIKKETHIVWYKDE 155 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE----EEEEETTTEEEEEEEEESCCTTCEEEEEETT
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC----CcEEcCCCcEEEEEEEeCCCCCCEEEEEECC
Confidence 9 544444433211 134443222 2467889999999999998 99999999999
Q ss_pred eecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 587 EPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 587 ~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
.++..+.++. ...+..+|.|.++.+.|.|.|+|.|.|..|....++.|+.
T Consensus 156 ~~l~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 156 REISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EEECCCCCCC--CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred EECCCCCceE--cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 9987655432 2334567999999999999999999999999888777654
No 87
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.78 E-value=5.1e-18 Score=190.26 Aligned_cols=221 Identities=14% Similarity=0.164 Sum_probs=143.2
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC-
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP- 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~- 482 (1101)
...+|.|.++++.|+|.|+|.|.|..|.......+..+.+.+... +.+|.+. .| ...+..|+.+.|.|.+.|.|++
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~-p~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~ 148 (327)
T 2wng_A 72 MDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAK-PSAPVVS-GP-AARATPQHTVSFTCESHGFSPRD 148 (327)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBC-CCCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSC
T ss_pred ceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEec-CCCceee-cc-ccccCCCCEEEEEEEEeCccCCC
Confidence 346799999999999999999999765421111122344444432 3445443 33 4667899999999999998876
Q ss_pred -eEEEEECCEEeecCCcEEEEe-cCC----eeEEEEeecCCCCCEEEEEEEEeCCCce---EEEEEE--eeccCCccccC
Q psy8139 483 -KVSWYKDGFEIFSSRRQRIVT-DND----ISTLIIHQAALMDEGEIKCTATNRAGHS---ITKARL--RLEAPPTIRLP 551 (1101)
Q Consensus 483 -~v~W~~~g~~~~~~~~~~~~~-~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~---~~s~~l--~V~~~p~~~~~ 551 (1101)
.++|+++|..+.......... .++ .+.|.|......|.|.|+|.|.|..|.. ..+..+ .+..+|.+...
T Consensus 149 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~ 228 (327)
T 2wng_A 149 ITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVT 228 (327)
T ss_dssp CEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEE
T ss_pred cEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEe
Confidence 899999998876443211111 111 1257777667777899999999988763 334444 34556665443
Q ss_pred CCCCCCeEEeeCCEEEEEEEEeecC-CC-eeEEEECCeecCCCCceEEEeecc-----eEEEEEccCCCCCCeEEEEEEE
Q psy8139 552 KQYEDGLLFEMGEIIKLKVSMAGMP-PP-TARWLHNGEPLTSGGRYEITHTDR-----YLNLRISDARRADRGEYQAHGV 624 (1101)
Q Consensus 552 ~~~~~~~~v~~g~~~~l~c~~~g~p-~~-~v~W~~~g~~l~~~~~~~~~~~~~-----~~sl~i~~l~~~~~y~y~c~A~ 624 (1101)
+. .+..|+.+.|.|.+.|.+ .+ .+.|+++|..+..+....+...++ ...|.|..+...|.|.|+|.|.
T Consensus 229 ~~-----~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~ 303 (327)
T 2wng_A 229 QQ-----PVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVE 303 (327)
T ss_dssp EE-----CCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEE
T ss_pred cC-----CcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEE
Confidence 22 155799999999999954 44 899999998875422111111111 2468888999999999999999
Q ss_pred eCCCCcee
Q psy8139 625 NSLGEDVA 632 (1101)
Q Consensus 625 N~~G~~~~ 632 (1101)
|..|....
T Consensus 304 N~~~~~~s 311 (327)
T 2wng_A 304 HDGQPAVS 311 (327)
T ss_dssp ETTCCCEE
T ss_pred eCCCCCch
Confidence 99987543
No 88
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.78 E-value=1.3e-17 Score=170.88 Aligned_cols=181 Identities=25% Similarity=0.419 Sum_probs=149.2
Q ss_pred CCeeeec--CceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 452 APSFIRA--LHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 452 ~P~~~~~--p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
||.+... +.++.+.+|++++|.|.+.+.|.+.+.|++++..+....++.+...+ ..|.|.++...|+|.|+|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTT--TEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCe--eEEEEecCChhcCcEEEEEEEc
Confidence 4555543 34677899999999999999999999999999998877776654433 4899999999999999999999
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEEC--CeecCC-----CCceEEEeecc
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHN--GEPLTS-----GGRYEITHTDR 602 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~--g~~l~~-----~~~~~~~~~~~ 602 (1101)
..|.......|.|..+|.+...+ ...+..|..+.|.|.+.+.|.+.+.|+++ +..+.. ..++.+.....
T Consensus 80 ~~~~~~~~~~l~V~~~p~~~~~~----~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQPHIIQLK----NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHG 155 (192)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEEC----CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETT
T ss_pred cccccceEEEEEEEccCcccccC----cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccC
Confidence 99988888889998887765432 23567799999999999999999999998 555543 34556655566
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
...|.|.++...|.|.|+|.|.|..|....+..|.|
T Consensus 156 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 156 SSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 789999999999999999999999999887777776
No 89
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.78 E-value=1.8e-17 Score=182.28 Aligned_cols=266 Identities=21% Similarity=0.280 Sum_probs=188.5
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccC-CCeEEEEE-CCEEeecC-CcEEEEe-cCCeeEEEEeecCCCCCEEEEEEE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIP-TPKVSWYK-DGFEIFSS-RRQRIVT-DNDISTLIIHQAALMDEGEIKCTA 527 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p-~~~v~W~~-~g~~~~~~-~~~~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a 527 (1101)
+|.+...|.+..+..|++++|.|.+.+.| .+.+.|++ +|..+... .++.+.. .+....|.|.++...|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 46677788889999999999999999987 68999999 77766533 3444432 345679999999999999999999
Q ss_pred EeCCCce-EEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCC--ceEEEeecceE
Q psy8139 528 TNRAGHS-ITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGG--RYEITHTDRYL 604 (1101)
Q Consensus 528 ~n~~g~~-~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~ 604 (1101)
.|..|.. .....|.|..+|.+...+. ...+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++... ...
T Consensus 82 ~n~~g~~~~~~~~l~v~~~~~~~~~~~---~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~---~~~ 155 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPT---PQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL---SNN 155 (291)
T ss_dssp ECTTSCEEEEEEEEEEECCSEEEECCS---SEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEEC---TTS
T ss_pred EcCCCCeeEEEEEEEeeccccccCCCC---cccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEc---cCC
Confidence 9998653 4567788888887765543 4478899999999999999999999999998875432 33322 245
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCCCce--eEEEEEEecCCCCC---CccEEEEecCCeEEEEeecCCCCCCcccceeEEE
Q psy8139 605 NLRISDARRADRGEYQAHGVNSLGEDV--ASFLVTVTDRPLPP---GKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVE 679 (1101)
Q Consensus 605 sl~i~~l~~~~~y~y~c~A~N~~G~~~--~s~~l~v~~~P~~P---~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~ 679 (1101)
.|.|.++...|.|.|+|.|.|..+... ....+.|..+|... .........+..+.|.|...+.+
T Consensus 156 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p----------- 224 (291)
T 1qz1_A 156 YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFP----------- 224 (291)
T ss_dssp CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEES-----------
T ss_pred cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeC-----------
Confidence 799999999999999999999875433 34556665554321 11233445677899999853211
Q ss_pred EEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEE
Q psy8139 680 YFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQ 759 (1101)
Q Consensus 680 ~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 759 (1101)
...+.|.... .++.. .... ...... ......++|.++.+.....
T Consensus 225 -----------------------~p~i~W~~~g----~~~~~-----~~~~-~~~~~~---~~~~~~L~i~~v~~~d~G~ 268 (291)
T 1qz1_A 225 -----------------------EPTMSWTKDG----EPIEN-----EEED-DEKHIF---SDDSSELTIRNVDKNDEAE 268 (291)
T ss_dssp -----------------------CCEEEEEETT----EECCC-----C--C-CSSEEE---CTTSCEEEECSCCGGGCEE
T ss_pred -----------------------CCcEEEEECC----EECcC-----CCCC-CcceEE---cCCCcEEEEEecChhcCEE
Confidence 1246776421 11100 0000 000111 1344679999999999999
Q ss_pred EEEEEEcCCcc
Q psy8139 760 FRITAENVVGF 770 (1101)
Q Consensus 760 ~~V~A~n~~G~ 770 (1101)
|.|.|.|..|.
T Consensus 269 Y~C~a~N~~G~ 279 (291)
T 1qz1_A 269 YVCIAENKAGE 279 (291)
T ss_dssp EEEEEEETTEE
T ss_pred EEEEEEeCCCc
Confidence 99999999996
No 90
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.78 E-value=1e-17 Score=172.15 Aligned_cols=177 Identities=18% Similarity=0.289 Sum_probs=147.1
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEe-ccCCCeEEEEECCEEeecCC--cEEEEecCC-------eeEEEEeecCCCCCE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVE-GIPTPKVSWYKDGFEIFSSR--RQRIVTDND-------ISTLIIHQAALMDEG 521 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~-g~p~~~v~W~~~g~~~~~~~--~~~~~~~~~-------~~~l~I~~l~~~d~g 521 (1101)
+|.|...|.+..+..|++++|.|.+. |.|.+.+.|+++|..+.... ++.+..... .+.|.|.++...|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 57788899999999999999999999 99999999999999887652 333333332 468999999999999
Q ss_pred EEEEEEEeCCCceEEE-EEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC-eeEEEECCeecCCCCceEEEe
Q psy8139 522 EIKCTATNRAGHSITK-ARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP-TARWLHNGEPLTSGGRYEITH 599 (1101)
Q Consensus 522 ~Y~C~a~n~~g~~~~s-~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~ 599 (1101)
.|+|.+.|..|..... +.|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+ .+.|++++..+......
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~---- 154 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPE---DRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH---- 154 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSCEEEECCC---CEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS----
T ss_pred EEEEEEEeCCCceecccEEEEEecCCeEEcCCC---cEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc----
Confidence 9999999988765543 8899998888765543 3578889999999999999999 99999999888755432
Q ss_pred ecceEEEEEccCCCCCCeEEEEEEEeCCCCce-eEEEEEE
Q psy8139 600 TDRYLNLRISDARRADRGEYQAHGVNSLGEDV-ASFLVTV 638 (1101)
Q Consensus 600 ~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~-~s~~l~v 638 (1101)
.....|.|.++. +.|.|+|.|.|..|... ....|.|
T Consensus 155 -~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 -GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp -SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 346789999988 78999999999999875 6777877
No 91
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=190.94 Aligned_cols=227 Identities=15% Similarity=0.194 Sum_probs=160.9
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCC-Ce
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPT-PK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~-~~ 483 (1101)
...|.|.+++..|.|.|+|.|.|..|.. +..+.+.+.. .+..+...+.+..+.+|+++.|.|.+.+.+. +.
T Consensus 50 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~-----~~~~~l~V~~---~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~ 121 (292)
T 4dkd_C 50 SSILSTNNATFQNTGTYRCTEPGDPLGG-----SAAIHLYVKD---PARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAG 121 (292)
T ss_dssp EEEEEESSCCGGGCSCEEECCCC----C-----CEEECCEECC---SSCCEEESCSEEEEETTSCEECCEEESSGGGGSS
T ss_pred eEEEEEcccccccCEEEEEEEccCCCCc-----ceEEEEEEcC---ccccccccCCeEEEcCCCcEEEeeeCCCCCccee
Confidence 4589999999999999999999977654 2334444432 1222455677888999999999999998332 68
Q ss_pred EEEEEC-CEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EEEEeecc----CCccccCCCCCCC
Q psy8139 484 VSWYKD-GFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KARLRLEA----PPTIRLPKQYEDG 557 (1101)
Q Consensus 484 v~W~~~-g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~~l~V~~----~p~~~~~~~~~~~ 557 (1101)
+.|+++ +..+.....+.....+ .|.|.++...|+|.|+|.|.|..|.... ...|.|.. +|.+...+. .
T Consensus 122 v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~---~ 195 (292)
T 4dkd_C 122 VSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPA---E 195 (292)
T ss_dssp EEEEEGGGCCCCSSCCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESS---C
T ss_pred EEEEecCCCccccCCcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCC---c
Confidence 999997 5555444444433222 4999999999999999999998776544 67888876 666655443 2
Q ss_pred eEEeeCCEEEEEEEEeecCC-CeeEEEECCeecCCCCceEEEee--cceEEEEEccCCCCCCeEEEEEEEeCCCCceeEE
Q psy8139 558 LLFEMGEIIKLKVSMAGMPP-PTARWLHNGEPLTSGGRYEITHT--DRYLNLRISDARRADRGEYQAHGVNSLGEDVASF 634 (1101)
Q Consensus 558 ~~v~~g~~~~l~c~~~g~p~-~~v~W~~~g~~l~~~~~~~~~~~--~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~ 634 (1101)
..+..|+.+.|.|.+.+.|. +.+.|.+++..+........... .....|.|.++...|.|.|+|.|.|..|....+.
T Consensus 196 ~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 275 (292)
T 4dkd_C 196 LVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSM 275 (292)
T ss_dssp BCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEE
T ss_pred eeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEE
Confidence 24468999999999998764 57888888876654332222111 1246899999999999999999999999988888
Q ss_pred EEEEecCCCCC
Q psy8139 635 LVTVTDRPLPP 645 (1101)
Q Consensus 635 ~l~v~~~P~~P 645 (1101)
.|.|.....++
T Consensus 276 ~l~V~~~~~~~ 286 (292)
T 4dkd_C 276 FFRVVESAGNS 286 (292)
T ss_dssp EECC-------
T ss_pred EEEEeeCCCcc
Confidence 88888765543
No 92
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.77 E-value=5.9e-18 Score=188.75 Aligned_cols=229 Identities=14% Similarity=0.101 Sum_probs=151.9
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
....|.|.++++.|+|.|+|.|.|..+....+..+..+.+.+... ..+|.+...|... +.+|++++|.|.+.+ +.+.
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~-~~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~ 148 (316)
T 3vh8_G 72 FQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGN-HRKPSLLAHPGPL-VKSGERVILQCWSDI-MFEH 148 (316)
T ss_dssp BSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECS-SCCCEEEEESCSE-EETTCCEEEEEEESS-CCSE
T ss_pred ceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecC-CCCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcE
Confidence 356899999999999999999998665444444556677766532 3456776666554 889999999999954 5668
Q ss_pred EEEEECCEEeecCCcEE-EEecCCeeEEEEeecCCCCCEEEEEEEEeCCCce-----EEEEEEeecc---CCccccCCCC
Q psy8139 484 VSWYKDGFEIFSSRRQR-IVTDNDISTLIIHQAALMDEGEIKCTATNRAGHS-----ITKARLRLEA---PPTIRLPKQY 554 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~-~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~-----~~s~~l~V~~---~p~~~~~~~~ 554 (1101)
+.|++++..+....... .........|.|.++...|+|.|+|.|.|..|.. +....|.|.. +|.+...+.
T Consensus 149 ~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~- 227 (316)
T 3vh8_G 149 FFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG- 227 (316)
T ss_dssp EEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC-
T ss_pred EEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC-
Confidence 99999987664321111 1112234589999999999999999999988752 3345666653 344433322
Q ss_pred CCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEE-eecceEEEEEccCCCCCCeEEEEEEEeCCCC----
Q psy8139 555 EDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEIT-HTDRYLNLRISDARRADRGEYQAHGVNSLGE---- 629 (1101)
Q Consensus 555 ~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~-~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~---- 629 (1101)
..+..|+.++|.|.+. .+.+.+.|+++|..+......... .......|.|.++. |.|.|+|.|.|..+.
T Consensus 228 ---~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s 301 (316)
T 3vh8_G 228 ---PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWS 301 (316)
T ss_dssp ---SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEEC
T ss_pred ---CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhcc
Confidence 1457799999999997 577899999999876532111111 11224789999999 999999999998764
Q ss_pred -ceeEEEEEEecCC
Q psy8139 630 -DVASFLVTVTDRP 642 (1101)
Q Consensus 630 -~~~s~~l~v~~~P 642 (1101)
.+....|.|.+.|
T Consensus 302 ~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 302 DPSDPLLVSVTGNP 315 (316)
T ss_dssp CCCCCEEC------
T ss_pred CCCCcEEEEEeCCC
Confidence 2345566666554
No 93
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.77 E-value=2e-17 Score=195.67 Aligned_cols=339 Identities=13% Similarity=0.083 Sum_probs=190.2
Q ss_pred hhhhhhhcccccCcceEEEeeeccccc-----ccccceeeeccCC-CCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCc
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGL-----NVGTDLYCVIKKP-PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGS 378 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~-----~~s~~~~~~v~~~-p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~ 378 (1101)
.+.|.|.++..+|+|.|+|.+.+..|. ..+....+.|... +.+|. ..............++|.|.... ..
T Consensus 79 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~-i~~~~~~~~~~g~~v~L~C~~~g---~~ 154 (475)
T 1iga_A 79 TAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPK-VFPLSLCSTQPDGNVVIACLVQG---FF 154 (475)
T ss_pred eEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCe-EEecCccccCCCCeEEEEEEEee---ec
Confidence 357999999999999999999877652 1233345555431 22221 11110000123455666665531 10
Q ss_pred CeeEEEEEEEecCCC-ceEE-------cCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccC--
Q psy8139 379 PVLGYLVEHRRTGSP-YWVR-------ASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS-- 448 (1101)
Q Consensus 379 ~i~~Y~v~~~~~~~~-~w~~-------~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~-- 448 (1101)
+.....|.|...+.. .-.. .+........|+|......|.|.|+|.|.|..|.. .+..+.+.+...
T Consensus 155 P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~----~~~~v~l~V~~~~~ 230 (475)
T 1iga_A 155 PQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS----QDVTVPCPVPSTPP 230 (475)
T ss_pred CCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc----eeeeEecccccCcc
Confidence 100012222211110 0000 00000111357888888899999999999988632 122233222110
Q ss_pred -----------C-CCCCee-eecCceeEEccCCeEEEEEEEeccCC---CeEEEEECCEEeecCCc--EEEEecC---Ce
Q psy8139 449 -----------P-AAAPSF-IRALHDTTALEDEKVEFTVQVEGIPT---PKVSWYKDGFEIFSSRR--QRIVTDN---DI 507 (1101)
Q Consensus 449 -----------~-~~~P~~-~~~p~~~~v~~g~~v~L~C~~~g~p~---~~v~W~~~g~~~~~~~~--~~~~~~~---~~ 507 (1101)
+ ..+|.+ ...|....+..|++++|.|.+.|.++ +.|+| ++..+..... .....++ ..
T Consensus 231 ~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~ 308 (475)
T 1iga_A 231 TPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVS 308 (475)
T ss_pred cccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEE
Confidence 0 124544 33344444689999999999998754 68999 4433321110 0001011 23
Q ss_pred eEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEe---eccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-C-CCeeEE
Q psy8139 508 STLIIHQAALMDEGEIKCTATNRAGHSITKARLR---LEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-P-PPTARW 582 (1101)
Q Consensus 508 ~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~---V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p-~~~v~W 582 (1101)
+.|.|.++...|+|.|+|.|.|..|.......+. +..+|.+...+.. ...+..|..+.|.|.+.|. | .+.|.|
T Consensus 309 ~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~--~~~v~~g~~~~L~C~~~g~~P~~~~v~W 386 (475)
T 1iga_A 309 SVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPP--SEELALNELVTLTCLARGFSPKDVLVRW 386 (475)
T ss_pred EEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCC--hHHhccCCceEEEEEEeeeECCCCEEEE
Confidence 4799999999999999999999988765544553 3456655433221 1125578889999999986 3 359999
Q ss_pred EECCeecCCCCceE----EE---eec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEE
Q psy8139 583 LHNGEPLTSGGRYE----IT---HTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVM 652 (1101)
Q Consensus 583 ~~~g~~l~~~~~~~----~~---~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~ 652 (1101)
+++|..+..+.... .. ..+ ..+.|.|......+.|.|+|.|.|......... -.+...|+.|..+.+..
T Consensus 387 ~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~~~~~~-~~~~~~~~~~~~~~~~~ 465 (475)
T 1iga_A 387 LQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPLAFTQ-KTIDRLAGKPTHVNVSV 465 (475)
T ss_pred EECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCCCcceE-EEEecCCCCceeEEEEE
Confidence 99999886543111 11 111 124566777777789999999999865432221 22234455554554444
Q ss_pred ecCC
Q psy8139 653 TLGK 656 (1101)
Q Consensus 653 ~~~~ 656 (1101)
..++
T Consensus 466 ~~~~ 469 (475)
T 1iga_A 466 VMAE 469 (475)
T ss_pred EEhh
Confidence 4443
No 94
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.77 E-value=9.5e-17 Score=175.79 Aligned_cols=263 Identities=17% Similarity=0.192 Sum_probs=166.4
Q ss_pred ccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecC-CCceEEcCccccccceEEEcCccCCccE
Q psy8139 341 IKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTG-SPYWVRASPHMVEDTELMVSGLEPGWRY 419 (1101)
Q Consensus 341 v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~-~~~w~~~~~~~~~~~~l~i~~L~p~d~y 419 (1101)
..++|.+|..+.. . .++.+++.|+|.+|. ..+.+|.|+++... ...|.... ......++.|.+|.|++.|
T Consensus 11 ~~~~p~~P~~l~~---~-~~~~~sv~l~W~~~~----~~~~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y 81 (283)
T 1tdq_A 11 GIPVIDGPTQILV---R-DVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFR-LQPPLSQYSVQALRPGSRY 81 (283)
T ss_dssp -CCSSCCCEEEEE---E-EECSSCEEEEEECCS----SCCSEEEEEEEESSSSCCCEEEE-ECTTCSEEEECSCCTTCEE
T ss_pred cccCCCCCcEEEE---E-ecCCCeEEEEEECCC----CceeEEEEEEEEecCCCCcEEEE-eCCCCCEEEecCCCCCCEE
Confidence 3445555555444 3 778899999999984 47889999996543 23343222 2245678999999999999
Q ss_pred EEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcE
Q psy8139 420 QFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQ 499 (1101)
Q Consensus 420 ~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~ 499 (1101)
.|+|.|.|..|.+.+ ..+.... ++.+| .++ .+...+.....+.|....
T Consensus 82 ~~~V~a~~~~g~s~~------~~~~~~t-~p~~P------~~l----------~~~~~~~~sv~l~W~~p~--------- 129 (283)
T 1tdq_A 82 EVSISAVRGTNESDA------SSTQFTT-EIDAP------KNL----------RVGSRTATSLDLEWDNSE--------- 129 (283)
T ss_dssp EEEEEEEETTEECCC------EEEEEEC-CCCCC------EEE----------EEEEECSSCEEEEEECCS---------
T ss_pred EEEEEEECCCCCCCC------eeEEEEC-CCCCC------Cce----------EEEecCCCeEEEEecCCC---------
Confidence 999999998776532 2222221 11222 122 222222233456664321
Q ss_pred EEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCe
Q psy8139 500 RIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPT 579 (1101)
Q Consensus 500 ~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~ 579 (1101)
+..-.|.+......+...
T Consensus 130 ------------------~~i~~Y~v~~~~~~~~~~-------------------------------------------- 147 (283)
T 1tdq_A 130 ------------------AEAQEYKVVYSTLAGEQY-------------------------------------------- 147 (283)
T ss_dssp ------------------SCCSEEEEEEEETTCCCC--------------------------------------------
T ss_pred ------------------CCccEEEEEEEeCCCCcc--------------------------------------------
Confidence 000112222211111000
Q ss_pred eEEEECCeecCCCCceEEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCC
Q psy8139 580 ARWLHNGEPLTSGGRYEITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGK 656 (1101)
Q Consensus 580 v~W~~~g~~l~~~~~~~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~ 656 (1101)
..+.... ....+.|.+|.+++.|.|++.|.|..|.+.. ..+.....|.+|.++.+...+.+
T Consensus 148 ---------------~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~-~~~~~~t~~~~P~~l~~~~~~~~ 211 (283)
T 1tdq_A 148 ---------------HEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIP-ATMNARTELDSPRDLMVTASSET 211 (283)
T ss_dssp ---------------EEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCCCCEEEEEEEECSS
T ss_pred ---------------eEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcc-eEEEecCCCCCCCccEEeEecCC
Confidence 0000011 1456889999999999999999999886544 34555567778888888888888
Q ss_pred eEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCcee
Q psy8139 657 SVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVR 736 (1101)
Q Consensus 657 sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~ 736 (1101)
++.|+|++|. +++.+|.|+|...++..+..
T Consensus 212 sv~l~W~~p~--------------------------------------------------~~i~~Y~v~~~~~~~~~~~~ 241 (283)
T 1tdq_A 212 SISLIWTKAS--------------------------------------------------GPIDHYRITFTPSSGISSEV 241 (283)
T ss_dssp CEEEEEECCC--------------------------------------------------SCCSEEEEEEECSSSCCEEE
T ss_pred EEEEEEeCCC--------------------------------------------------CcccEEEEEEEcCCCCeeEE
Confidence 8888887642 24677888777765533222
Q ss_pred ecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCC
Q psy8139 737 ASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPG 774 (1101)
Q Consensus 737 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 774 (1101)
.. ....++++|.+|.|++.|.|+|.|.|..|.|+++
T Consensus 242 ~~--~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~ 277 (283)
T 1tdq_A 242 TV--PRDRTSYTLTDLEPGAEYIISITAERGRQQSLES 277 (283)
T ss_dssp EE--ESSCSEEEECCCCTTCCEEEEEEEEETTEECCCE
T ss_pred Ee--CCCccEEEECCCCCCCEEEEEEEEEcCCCCCcce
Confidence 22 2677899999999999999999999999997764
No 95
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.76 E-value=4e-17 Score=179.50 Aligned_cols=128 Identities=13% Similarity=0.019 Sum_probs=91.9
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEec---CCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEE
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTD---RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVE 679 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~---~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~ 679 (1101)
...+.+.+|.+++.|.|+|.|.|..|.+.. ..+.+.. .|..|..+.+...+.+++.|+|++|.
T Consensus 156 ~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~-~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~------------- 221 (290)
T 3l5i_A 156 HRTYLRGNLAESKCYLITVTPVYADGPGSP-ESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLP------------- 221 (290)
T ss_dssp SEEECCSCCCTTCEEEEEEEEEETTEECCC-EEEEEESSCCCCSSCCCEEEEEECSSCEEEEECCCC-------------
T ss_pred cceEEecCcCCccEEEEEEEEEeCCccccc-EEEEeEccccCCCCCCeeeEeeccCCEEEEEEcCCC-------------
Confidence 456778899999999999999999997664 2333333 34444466666677777777777431
Q ss_pred EEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEE
Q psy8139 680 YFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQ 759 (1101)
Q Consensus 680 ~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 759 (1101)
..+.++.|.+|.|+|+..++. |.... .....++++|.+|.|++.|.
T Consensus 222 --------------------------------~~~~~g~i~~Y~v~~~~~~~~-~~~~~-~~~~~~~~~~~~L~p~t~Y~ 267 (290)
T 3l5i_A 222 --------------------------------VDVQNGFIRNYTIFYRTIIGN-ETAVN-VDSSHTEYTLSSLTSDTLYM 267 (290)
T ss_dssp --------------------------------HHHHSSCCCEEEEEEEETTSC-CEEEE-EETTCSEEEECSCCTTCEEE
T ss_pred --------------------------------hhccCCEEEEEEEEEEeCCCC-eEEEE-eCCCceEEEeCCCCCCCEEE
Confidence 122345688999999887654 33322 23678899999999999999
Q ss_pred EEEEEEcCCccCCCCCCCCc
Q psy8139 760 FRITAENVVGFSEPGPLSEP 779 (1101)
Q Consensus 760 ~~V~A~n~~G~g~~S~~s~~ 779 (1101)
|+|.|.|..| |++|+...+
T Consensus 268 ~~V~A~n~~G-g~~s~~~~~ 286 (290)
T 3l5i_A 268 VRMAAYTDEG-GKDGPEFTF 286 (290)
T ss_dssp EEEEEEETTE-EEECCCEEE
T ss_pred EEEEEEeCCC-CCCCCceEe
Confidence 9999999999 776655433
No 96
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.76 E-value=2.2e-18 Score=202.32 Aligned_cols=310 Identities=14% Similarity=0.120 Sum_probs=177.1
Q ss_pred hhhhhhhcccccCcceEEEeeeccccc--ccccceeeeccCC-CCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCee
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGL--NVGTDLYCVIKKP-PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVL 381 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~--~~s~~~~~~v~~~-p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~ 381 (1101)
.+.|.|.++..+|+|.|.|.+.|..|. ..+....+.+... +.+|................++|.|.... ..+.
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g---~~P~- 153 (444)
T 1igt_B 78 TLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKG---YFPE- 153 (444)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEE---EBSS-
T ss_pred eEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcc---eeCC-
Confidence 357999999999999999999876543 2333345555432 11221000000000122345555554420 0000
Q ss_pred EEEEEEEecCCCc-eE-----EcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEecc--------
Q psy8139 382 GYLVEHRRTGSPY-WV-----RASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR-------- 447 (1101)
Q Consensus 382 ~Y~v~~~~~~~~~-w~-----~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~-------- 447 (1101)
...+.|...+... .. ...........|.|.++...| |.|+|.|.|..|... +...+..
T Consensus 154 p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-------~~~~i~~~~~~~~~~ 225 (444)
T 1igt_B 154 PVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK-------VDKKIEPRGPTIKPC 225 (444)
T ss_dssp CCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEE-------EEEECCCCCCSCCCC
T ss_pred CcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcc-------eEEEeccCCCCcccC
Confidence 0112222211110 00 000001112468899999888 999999999887531 1222111
Q ss_pred --------CCCCCCee-eecCceeE-EccCCeEEEEEEEeccC----CCeEEEEECCEEeecCCcE--EEEecC---Cee
Q psy8139 448 --------SPAAAPSF-IRALHDTT-ALEDEKVEFTVQVEGIP----TPKVSWYKDGFEIFSSRRQ--RIVTDN---DIS 508 (1101)
Q Consensus 448 --------~~~~~P~~-~~~p~~~~-v~~g~~v~L~C~~~g~p----~~~v~W~~~g~~~~~~~~~--~~~~~~---~~~ 508 (1101)
....+|.+ ...|.... +..|++++|.|.+.|.| .+.++|++++..+...... ....++ ..+
T Consensus 226 ~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (444)
T 1igt_B 226 PPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVS 305 (444)
T ss_dssp CCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEE
T ss_pred CccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEE
Confidence 11235665 34343333 58899999999999884 3689999999887543211 111111 234
Q ss_pred EEEEeecCCCCCEEEEEEEEeCCCceEEEEEE----eeccCCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEE
Q psy8139 509 TLIIHQAALMDEGEIKCTATNRAGHSITKARL----RLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARW 582 (1101)
Q Consensus 509 ~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l----~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W 582 (1101)
.|.|.++...|+|.|+|.|.|..|.......+ .+..+|.+...+.... .+ .+..+.|.|.+.| .|.+ .|.|
T Consensus 306 ~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~--~~-~~~~~~L~C~~~g~~P~~~~v~W 382 (444)
T 1igt_B 306 ALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEE--EM-TKKQVTLTCMVTDFMPEDIYVEW 382 (444)
T ss_dssp EEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGG--GT-TSSEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChH--Hc-cCCeEEEEEEEEeeeCCCCEEEE
Confidence 89999999999999999999998876333333 3445666543222110 12 2445999999998 4555 9999
Q ss_pred EECCeecCCCCceEE--Eeecc---eEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 583 LHNGEPLTSGGRYEI--THTDR---YLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 583 ~~~g~~l~~~~~~~~--~~~~~---~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
+++|..+........ ...+. .+.+.|......+.|.|+|.|.|..-.
T Consensus 383 ~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 383 TNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp EETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred EECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 999988743211111 11111 234556665556799999999997543
No 97
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.76 E-value=2.9e-19 Score=226.09 Aligned_cols=346 Identities=14% Similarity=0.139 Sum_probs=173.8
Q ss_pred CCCCCeeEEEEeCCCCCCCcCeeEEEEEEEec--------------CCCceEEcCcccc---------ccceEEEcCccC
Q psy8139 359 SLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRT--------------GSPYWVRASPHMV---------EDTELMVSGLEP 415 (1101)
Q Consensus 359 ~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~--------------~~~~w~~~~~~~~---------~~~~l~i~~L~p 415 (1101)
.+++++++|+|.+|..+++.+|.+|.|+++.. +...|........ ...++.|.+|.|
T Consensus 479 ~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~L~P 558 (897)
T 2dtg_E 479 RTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKP 558 (897)
T ss_dssp EECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEECSCCS
T ss_pred EEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeCCCCC
Confidence 67899999999999766777999999999765 2345765432221 247799999999
Q ss_pred CccEEEEEEE-EecCCCCC-CCCCCcceEEEeccCCCCCCeeeecCceeEEc--cCCeEEEEEEEeccCCCe-----EEE
Q psy8139 416 GWRYQFRITA-ENVVGFSE-PGPLSEPLTVTYQRSPAAAPSFIRALHDTTAL--EDEKVEFTVQVEGIPTPK-----VSW 486 (1101)
Q Consensus 416 ~d~y~y~c~A-~n~~G~~~-~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~--~g~~v~L~C~~~g~p~~~-----v~W 486 (1101)
++.|.|+|.| .|..|.+. ++..|..+.+.....++. .|.++.+. ...++.|.|.....+... |.|
T Consensus 559 ~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps------~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~Y~V~~ 632 (897)
T 2dtg_E 559 WTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPS------VPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFW 632 (897)
T ss_dssp SCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCC------CCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCE
T ss_pred CcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCc------CCcceEEEeCCCCEEEEEEeCCCCCCCCeeEEEEEE
Confidence 9999999999 89888732 233345555543332222 33444433 345566666544222222 223
Q ss_pred EECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEE
Q psy8139 487 YKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEII 566 (1101)
Q Consensus 487 ~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~ 566 (1101)
...+.. ... .... ......+.+...|.+.+.|.+..+................+..+ .
T Consensus 633 ~~~~~~----~~~---~~~~--~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p-------------~ 690 (897)
T 2dtg_E 633 ERQAED----SEL---FELD--YCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTD-------------S 690 (897)
T ss_dssp EEECCC----CSC---TTCS--SSCSCCCCCC------------------------------------------------
T ss_pred EECCCC----ccc---eecc--cccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcc-------------c
Confidence 221110 000 0000 01112245677788888888775443222110000000000000 0
Q ss_pred EEEEEEeecCCCeeEEEECCeec---C--C---------------CCceEEEeecceEEEEEccCCCCCCeEEEEEEEeC
Q psy8139 567 KLKVSMAGMPPPTARWLHNGEPL---T--S---------------GGRYEITHTDRYLNLRISDARRADRGEYQAHGVNS 626 (1101)
Q Consensus 567 ~l~c~~~g~p~~~v~W~~~g~~l---~--~---------------~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~ 626 (1101)
.+. .........+.|....... . . ...+.+...+...+++|.+|.+++.|.|++.|.|.
T Consensus 691 ~~~-~~~~~~s~~~~W~~~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~ 769 (897)
T 2dtg_E 691 QIL-KELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQ 769 (897)
T ss_dssp ----------------------------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESC
T ss_pred chh-hhhhhhheeeeEEEccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeC
Confidence 000 0011122334443210000 0 0 00011112223468999999999999999999999
Q ss_pred CCCcee---EEEEEEecC-----CCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCC
Q psy8139 627 LGEDVA---SFLVTVTDR-----PLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPS 698 (1101)
Q Consensus 627 ~G~~~~---s~~l~v~~~-----P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~ 698 (1101)
.|.+.. +..+.+.+. |.+|.++.+. .
T Consensus 770 ~G~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~----------------------------------------------~ 803 (897)
T 2dtg_E 770 DTPEERCSVAAYVSARTMPEAKADDIVGPVTHE----------------------------------------------I 803 (897)
T ss_dssp SSSSCCBCCCCCEEEECCCCCCCCCCCCCCCCC----------------------------------------------S
T ss_pred CCCCCCCCCCceeEEeccCccCCCCCCcceEEE----------------------------------------------e
Confidence 986532 333333332 2333333333 3
Q ss_pred CCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecc--cccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCC
Q psy8139 699 LDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASP--HMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPL 776 (1101)
Q Consensus 699 ~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 776 (1101)
.+.+++.|+|++|...+ +.|.+|.|+|+..++..+..... .....+.++|.+|.|+ .|.|+|+|.|..|.|++|++
T Consensus 804 ~~~~sv~LsW~~P~~~n-G~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~ 881 (897)
T 2dtg_E 804 FENNVVHLMWQEPKEPN-GLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEP 881 (897)
T ss_dssp SSSSCCCCCCCCCCSCS-SCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCC
T ss_pred CCCCEEEEEECCCCCCC-CCEEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCC
Confidence 44556666666664433 45888888888766522222111 1246678999999999 69999999999999998876
Q ss_pred CCcEE
Q psy8139 777 SEPLT 781 (1101)
Q Consensus 777 s~~~t 781 (1101)
..+.|
T Consensus 882 v~~~T 886 (897)
T 2dtg_E 882 TYFYV 886 (897)
T ss_dssp CEECC
T ss_pred EEEEe
Confidence 65544
No 98
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.76 E-value=3.7e-17 Score=166.96 Aligned_cols=177 Identities=24% Similarity=0.376 Sum_probs=144.5
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEE-CCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYK-DGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
+...|.+..+..|+++.|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.++...|+|.|+|.+.|..|.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 83 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQ 83 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCC
Confidence 455677888999999999999999887 999999 787777777888877777789999999999999999999999887
Q ss_pred e-EEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCC--CCceEEEeecceEEEEEcc
Q psy8139 534 S-ITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTS--GGRYEITHTDRYLNLRISD 610 (1101)
Q Consensus 534 ~-~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~--~~~~~~~~~~~~~sl~i~~ 610 (1101)
. .....|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.... .+.|.|.+
T Consensus 84 ~~~~~~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~ 157 (189)
T 2v44_A 84 TQEATVVLEIYQKLTFREVVS---PQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA---NNNLQILN 157 (189)
T ss_dssp EEEEEEEEEEECCCEEESCCC---SEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECT---TSCEEETT
T ss_pred cEEEEEEEEEecCCceeecCC---cEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEec---CCcEEEEE
Confidence 6 5567888888887764433 35788999999999999999999999999887752 34444432 34799999
Q ss_pred CCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 611 ARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 611 l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
+...|.|.|+|.|.|..|.......+.+
T Consensus 158 v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 158 INKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cCcccCeEEEEEEEccccCceeeeeEEE
Confidence 9999999999999999987655444433
No 99
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.75 E-value=2.5e-17 Score=178.00 Aligned_cols=195 Identities=13% Similarity=0.176 Sum_probs=150.6
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~ 482 (1101)
....|.|.+++..|.|.|+|.|.|..+. ..+.+.+. .+| +...+....+.+|+.+.|.|.+ .+.|.+
T Consensus 46 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~s-------~~~~l~v~----~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~ 113 (262)
T 3rjd_A 46 STPSYRITSASVNDSGEYRCQRGLSGRS-------DPIQLEIH----RGW-LLLQVSSRVFTEGEPLALRCHAWKDKLVY 113 (262)
T ss_dssp CSSEEEESSCCGGGCEEEEEEESSSCCC-------CCEEEEEE----CSS-EEEEESCSEEETTSCEEEEEEEGGGCCCE
T ss_pred cCCeEEEecCCcccCeEEEEEEecCCcc-------ccEEEEEe----ccc-eEecCCCeEEecCCeEEEEEEccCCCCCc
Confidence 3578999999999999999999875432 33555554 223 3445566778899999999999 778888
Q ss_pred eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeecc---CCccccCCCCCCCeE
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEA---PPTIRLPKQYEDGLL 559 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~---~p~~~~~~~~~~~~~ 559 (1101)
.+.|++++..+... .. ...|.|.++...|.|.|+|.|.|..+.......|.|.. +|.+...+ ...
T Consensus 114 ~v~W~~~g~~~~~~------~~--~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~----~~~ 181 (262)
T 3rjd_A 114 NVLYYRNGKAFKFF------HW--NSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV----TSP 181 (262)
T ss_dssp EEEEEETTEEEEEE------EE--CCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS----CSS
T ss_pred eEEEEECCcccccc------CC--CCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC----cee
Confidence 99999999877422 11 23799999999999999999999987777777888875 34443333 235
Q ss_pred EeeCCEEEEEEEEeecCC-Ce----eEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 560 FEMGEIIKLKVSMAGMPP-PT----ARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 560 v~~g~~~~l~c~~~g~p~-~~----v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
+..|+.+.|.|.+.+.|. +. +.|++++..+.. ......|.|.++...|.|.|+|.|.|..|..
T Consensus 182 ~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~--------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 182 LLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG--------RNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp EETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE--------EESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred ecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc--------cCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 778999999999999875 53 678888876542 1235689999999999999999999999975
No 100
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.75 E-value=1.2e-17 Score=183.67 Aligned_cols=247 Identities=13% Similarity=0.052 Sum_probs=166.9
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
.+|.+|.++.+...+.+++.|+|++|. +++
T Consensus 19 ~~p~~P~~l~~~~~~~~sv~l~W~~p~--------------------------------------------------~~~ 48 (290)
T 3r8q_A 19 PAIPAPTDLKFTQVTPTSLSAQWTPPN--------------------------------------------------VQL 48 (290)
T ss_dssp -CCCCCEEEEEEEECSSCEEEEEECCS--------------------------------------------------SCC
T ss_pred CCCCCCCceEEEECCCCEEEEEEeCCC--------------------------------------------------CCe
Confidence 456778888888788888888887651 247
Q ss_pred ceEEEEEEeCCC-CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc--
Q psy8139 720 LGYLVEHRRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR-- 796 (1101)
Q Consensus 720 ~~Y~V~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~-- 796 (1101)
.+|.|+|+..+. ..|..... ..+.++++|.+|.|++.|.|+|.|.|..|.|+++. ....+ ...| .+|.++.
T Consensus 49 ~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~---~~~~t-~~~~-~~P~~l~~~ 122 (290)
T 3r8q_A 49 TGYRVRVTPKEKTGPMKEINL-APDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQ---GVVTT-LENV-SPPRRARVT 122 (290)
T ss_dssp CEEEEEEEESSSSSCCEEEEE-CTTCCEEEECSCCSSCEEEEEEEEEETTEECCCEE---EEEEC-CCCC-CCCEEEEEE
T ss_pred eEEEEEEEeCCCCCceEEEEc-CCCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcc---eeEec-CCCC-CCCceeEEE
Confidence 788888877653 34554433 25678999999999999999999999999987752 22222 1233 4555554
Q ss_pred cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeeccccccCCCCCCC
Q psy8139 797 ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVETNEHTGTGAPSDN 876 (1101)
Q Consensus 797 ~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~~~~~~~~~~l 876 (1101)
...++++.+.|.++ ++++. .|.|.|+..+....+ ...+. .......+
T Consensus 123 ~~~~~sv~l~W~~p---------------~~~~~------------~Y~v~~~~~~~~~~~-~~~~~-----~~~~~~~i 169 (290)
T 3r8q_A 123 DATETTITISWRTK---------------TETIT------------GFQVDAVPANGQTPI-QRTIK-----PDVRSYTI 169 (290)
T ss_dssp EECSSCEEEEEECC---------------SCCCC------------EEEEEEEESSSCCCE-EEEEC-----TTCSEEEE
T ss_pred EcCCCeEEEEEeCC---------------CCccc------------EEEEEEEECCCCcce-EEecC-----CCccEEEE
Confidence 45667788889774 13445 889988776633322 22221 12222334
Q ss_pred CCccCcccce--eeccccccc--CceeecccCCCCccCCCCCChhhhhhhhhhhccccccccccchhhcccccchhhhhh
Q psy8139 877 ENESDYFPEK--TIDESVYGY--DTIVYGYDSDDLDRHYPTLDEEEEEEDRESLVKDRESSVKGKEEEAKVIKDDEYYEN 952 (1101)
Q Consensus 877 ~~~~~~t~Y~--V~a~n~~G~--~~~v~~~t~e~~P~~~P~~v~~~~~~~n~t~v~vp~~~~nG~i~gY~I~~~~~~y~~ 952 (1101)
.+|.+.+.|. |+|.|..|. +..+...+. ..+|.++.+... +.+++.|-+..+.|.|.+|.| +|..
T Consensus 170 ~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~----p~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~Y~v-----~~~~ 238 (290)
T 3r8q_A 170 TGLQPGTDYKIYLYTLNDNARSSPVVIDASTA----IDAPSNLRFLAT--TPNSLLVSWQPPRARITGYII-----KYEK 238 (290)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCEEEEEECC----CCCCEEEEEEEE--ETTEEEEEEECCSSCCCEEEE-----EEEC
T ss_pred CCCCCCCEEEEEEEEEeCCcccCCEEEEecCC----CCCCCccEEEee--CCCEEEEEEeCCCCcccEEEE-----EEEe
Confidence 4455999999 999999988 433444432 357789998877 556666643334479999999 8887
Q ss_pred cccccccccccccCCceeEeecCCCCCCCceeec
Q psy8139 953 LGDVLTKKYSLPVNSDIQIKIDKPDDEPDYVIKG 986 (1101)
Q Consensus 953 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 986 (1101)
.++...............++|.+|.+|+.|.|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 272 (290)
T 3r8q_A 239 PGSPPREVVPRPRPGVTEATITGLEPGTEYTIYV 272 (290)
T ss_dssp TTSCCEECSSCCCTTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCcceeEeccCCCccEEEECCCCCCCEEEEEE
Confidence 7665444333334566789999999999999988
No 101
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.75 E-value=5.5e-17 Score=178.25 Aligned_cols=223 Identities=11% Similarity=0.024 Sum_probs=148.5
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCc--eeEEccCCeEEEEEEEeccCCCe
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALH--DTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~--~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
..|.|.++++.|+|.|+|.|.|..|.... .+..+.+.+. .+..|.+...+. .+.+.+|+++.|.|.+. .|.+.
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~--~~~~~~v~v~--~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~ 125 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGLETD--ERKRLYIFVP--DPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLV 125 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC------C--CCEEEEEECC--CTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSC
T ss_pred EEEEEccCChhhCEEEEEEEcccCCCCcC--cEEeEEEEEE--CCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCce
Confidence 67999999999999999999998875321 1233444432 122233222222 26789999999999998 67788
Q ss_pred EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EEEEeecc--CCccccCCCCCCCeEE
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KARLRLEA--PPTIRLPKQYEDGLLF 560 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~~l~V~~--~p~~~~~~~~~~~~~v 560 (1101)
++|++.+....... ... ... .+. ...|+|.|+|.|.|..+...+ ...|.|.. +|.+...+. ...+
T Consensus 126 v~w~~~~~~~~~~~--~~~-~~~--~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~---~~~v 193 (289)
T 3mjg_X 126 VTLHEKKGDVALPV--PYD-HQR--GFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAV---QTVV 193 (289)
T ss_dssp EEEEESSCCSCCCC--CEE-TTT--EEE----ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEES---CSEE
T ss_pred EEEEeCCCCCccce--eec-CCc--Cee----eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCC---ccee
Confidence 99988652111110 001 111 111 357999999999987765544 34566654 454443332 2468
Q ss_pred eeCCEEEEEEEEeecCCCeeEEEECCeecCCCCce-EEEe----ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEE
Q psy8139 561 EMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRY-EITH----TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFL 635 (1101)
Q Consensus 561 ~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~-~~~~----~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~ 635 (1101)
..|+.+.|.|.+.+.|.+.+.|++++......... .... .....+|.|.++...|.|.|+|.|.|..|....++.
T Consensus 194 ~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 273 (289)
T 3mjg_X 194 RQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKA 273 (289)
T ss_dssp ETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEE
T ss_pred EcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEE
Confidence 89999999999999999999999877654322111 1111 123578999999999999999999999999999999
Q ss_pred EEEecCCCCC
Q psy8139 636 VTVTDRPLPP 645 (1101)
Q Consensus 636 l~v~~~P~~P 645 (1101)
|.+...|...
T Consensus 274 l~v~~~~~~~ 283 (289)
T 3mjg_X 274 INITVVESGH 283 (289)
T ss_dssp EEEEEEC---
T ss_pred EEEEEEecCc
Confidence 9998777554
No 102
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.75 E-value=5e-17 Score=169.37 Aligned_cols=173 Identities=21% Similarity=0.288 Sum_probs=145.0
Q ss_pred ccCCeEEEEEEEecc-CCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 465 LEDEKVEFTVQVEGI-PTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 465 ~~g~~v~L~C~~~g~-p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
..++.+.|.|.+.+. |.+.+.|+++|..+....++.+...++...|.|.++...|+|.|+|.|.|..|.......|.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 367788999999884 5889999999999988888888777877789999999999999999999988887777777665
Q ss_pred c--------------------CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEee-cc
Q psy8139 544 A--------------------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHT-DR 602 (1101)
Q Consensus 544 ~--------------------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~ 602 (1101)
. .|.+.. ..+....+..|+.+.|.|.+.|.|.|.+.|++++..+..+.++.+... +.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 172 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLG--GLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGR 172 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEE--BCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTT
T ss_pred eccchhhhccccCcccccccCCCcccc--cCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCC
Confidence 2 222211 112345788899999999999999999999999999988777777655 55
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
...|.|.++...|.|.|+|.|.|..|.......|.|.
T Consensus 173 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 173 TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 6799999999999999999999999998888888876
No 103
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.75 E-value=3.6e-17 Score=165.94 Aligned_cols=175 Identities=18% Similarity=0.275 Sum_probs=140.5
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCC--eeEEEEeecCCCCCEEEEEEEEe
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDND--ISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~--~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
+|.|...|.++.+..|+++.|.|.+.+.|.+.+.|++++..+.......+...+. ...|.|.++...|+|.|+|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 4567777888999999999999999999999999999999887665554444332 35899999999999999999999
Q ss_pred CCCce-EEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC-eeEEEECCeecCCCCceEEEeecceEEEE
Q psy8139 530 RAGHS-ITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP-TARWLHNGEPLTSGGRYEITHTDRYLNLR 607 (1101)
Q Consensus 530 ~~g~~-~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~sl~ 607 (1101)
..|.. .....|.|..+|.+...+. ...+..|+.+.|.|.+.+.|.| .+.|++++..+..... ....|.
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~ 151 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFFTVEPK---DLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-------SPSVLN 151 (182)
T ss_dssp CTTCEECCCEEEEEECSCEEEECCC---CEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-------SSEEEE
T ss_pred CCCcEEEEEEEEEEecCCeEEecCc---ceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-------CceEEE
Confidence 87754 3468899999888766544 3578899999999999999999 9999999988864321 367899
Q ss_pred EccCCCCCCeEEEEEEEeCCCCcee-EEEEEE
Q psy8139 608 ISDARRADRGEYQAHGVNSLGEDVA-SFLVTV 638 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~N~~G~~~~-s~~l~v 638 (1101)
|.++. |.|.|+|.|.|..|.... +..|.|
T Consensus 152 i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 152 VTGVT--QSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred Eeccc--cCeEEEEEEECCCCCcccceEEEEe
Confidence 99884 789999999999997743 666665
No 104
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.75 E-value=3.9e-18 Score=175.61 Aligned_cols=169 Identities=17% Similarity=0.172 Sum_probs=128.7
Q ss_pred eeEEccCCeEEEEEE---EeccCCCeEEEEECCEEee-----------------cCCcEEEEecCCeeEEEEeecCCCCC
Q psy8139 461 DTTALEDEKVEFTVQ---VEGIPTPKVSWYKDGFEIF-----------------SSRRQRIVTDNDISTLIIHQAALMDE 520 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~---~~g~p~~~v~W~~~g~~~~-----------------~~~~~~~~~~~~~~~l~I~~l~~~d~ 520 (1101)
++++..|+.++|.|. +.+.|.+.|+|+++|.... ....+.+....+...|.|.++...|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 467889999999995 4678999999999753111 11334455566677999999999999
Q ss_pred EEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecC----CCCceE
Q psy8139 521 GEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLT----SGGRYE 596 (1101)
Q Consensus 521 g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~----~~~~~~ 596 (1101)
|.|+|.|.|..|.....+.|.|..||.+...+. ...+..|+++.|.|.+.|.|.|.+.|.+++..+. ...++.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~---~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~ 158 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSE---RSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVM 158 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEE---ECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCE
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecce---eEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEE
Confidence 999999999999998899999988887765443 2246679999999999999999999988765442 234455
Q ss_pred EEeecceEEEEEccCCCCCCeEEEEEEEeCCCCcee
Q psy8139 597 ITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 597 ~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~ 632 (1101)
+..++.-..+.+.++.+.|.|.|+|.|.|..|....
T Consensus 159 ~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 159 KEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 554444455677899999999999999999998654
No 105
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.75 E-value=1.5e-18 Score=190.97 Aligned_cols=251 Identities=11% Similarity=0.040 Sum_probs=170.7
Q ss_pred CCCCCCcccCC----CCCCCCceEEEEeeCC-CCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEE
Q psy8139 685 GPPGKPQLLPD----SPSLDRDVFTIRWEPP-EYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQ 759 (1101)
Q Consensus 685 ~~p~~p~~~~~----~~~~~~~si~l~W~pP-~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 759 (1101)
++|+.|+.+.. ....+.+++.|+|+|| ..+++++|.+|.|.|...+...+ . ...+...+.+|.|++.|.
T Consensus 2 ~~Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~-~-----~~~~~~~~~~l~p~t~Y~ 75 (290)
T 3l5i_A 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ-N-----YTVNATKLTVNLTNDRYL 75 (290)
T ss_dssp CCCSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCE-E-----EEESSSEEEEEECSSCEE
T ss_pred CCCCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCce-e-----EecCCcEEEEEcCCceEE
Confidence 45666665432 2345679999999983 44567889999999998776432 1 122334678899999999
Q ss_pred EEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc-cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhh
Q psy8139 760 FRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR-ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLML 838 (1101)
Q Consensus 760 ~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~-~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 838 (1101)
|+|.|.|..|.|+++ ...+......|+.||.++. ...++++.+.|.++.. ++.
T Consensus 76 ~~V~A~n~~G~s~~s---~~~~~~~~~~~~~p~~~~~~~~~~~si~l~W~~p~~---------------~i~-------- 129 (290)
T 3l5i_A 76 ATLTVRNLVGKSDAA---VLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRE---------------SVK-------- 129 (290)
T ss_dssp EEEEEEESSCBCCCE---EEEECCTTCCCCCCCEEEEEEEETTEEEEEEECCSS---------------CCC--------
T ss_pred EEEEEEcCCCCCCCc---eEEeecccccCCCccceeEEEeCCCeEEEEEeCCCC---------------CCC--------
Confidence 999999999997664 3333332224666776665 3334577788977532 344
Q ss_pred hceeeEEeeeeccCCCCC----Cceeeee-ccccccCCCCCCCCCccCcccce--eeccccccc--CceeecccCCCCcc
Q psy8139 839 FTFIETISSFRDKYVDNE----DDYDIVE-TNEHTGTGAPSDNENESDYFPEK--TIDESVYGY--DTIVYGYDSDDLDR 909 (1101)
Q Consensus 839 ~~~~~Y~v~~r~~~~~~~----~~~~~v~-~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~--~~~v~~~t~e~~P~ 909 (1101)
.|.|.|+....... |...... ...+. +.+|.+++.|. |+|.|..|. +..+..+|.+++|.
T Consensus 130 ----~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~~~P~ 198 (290)
T 3l5i_A 130 ----KYILEWCVLSDKAPCITDWQQEDGTVHRTYL-------RGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPS 198 (290)
T ss_dssp ----EEEEEEEEECSSSCCCCEEEEEETTCSEEEC-------CSCCCTTCEEEEEEEEEETTEECCCEEEEEESSCCCCS
T ss_pred ----cEEEEEEECCCCCCCCcCeEEccCCCcceEE-------ecCcCCccEEEEEEEEEeCCcccccEEEEeEccccCCC
Confidence 88898887664432 3332111 12223 34555999999 999999997 66778889999998
Q ss_pred CCCCCChhhhhhhhhhhccc---cccccccchhhcccccchhhhhhcccccccccccccCCceeEeecCCCCCCCceeec
Q psy8139 910 HYPTLDEEEEEEDRESLVKD---RESSVKGKEEEAKVIKDDEYYENLGDVLTKKYSLPVNSDIQIKIDKPDDEPDYVIKG 986 (1101)
Q Consensus 910 ~~P~~v~~~~~~~n~t~v~v---p~~~~nG~i~gY~I~~~~~~y~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 986 (1101)
.+| ++.+...++++..|.| |+...||.|.||+| +|+..++... ...+ ......++|.+|.+++.|.|+.
T Consensus 199 ~~p-~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v-----~~~~~~~~~~-~~~~-~~~~~~~~~~~L~p~t~Y~~~V 270 (290)
T 3l5i_A 199 KGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTI-----FYRTIIGNET-AVNV-DSSHTEYTLSSLTSDTLYMVRM 270 (290)
T ss_dssp SCC-CEEEEEECSSCEEEEECCCCHHHHSSCCCEEEE-----EEEETTSCCE-EEEE-ETTCSEEEECSCCTTCEEEEEE
T ss_pred CCC-eeeEeeccCCEEEEEEcCCChhccCCEEEEEEE-----EEEeCCCCeE-EEEe-CCCceEEEeCCCCCCCEEEEEE
Confidence 888 6666666334444555 35578999999999 8877655432 1112 3455689999999999999998
No 106
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.75 E-value=1.5e-17 Score=184.37 Aligned_cols=219 Identities=14% Similarity=0.179 Sum_probs=150.7
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCC-CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSP-AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~-~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
..|.|.+++..|.|.|+|.|.|..|... ..+.+.+...+ ...|.+...+....+..|+.+.|.|.+.|.|.+.+
T Consensus 62 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-----~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i 136 (305)
T 2nzi_A 62 HQLIIASVTDDDATVYQVRATNQGGSVS-----GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVI 136 (305)
T ss_dssp EEEEESSCCGGGCSEEEEEEEETTEEEE-----EEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEE
T ss_pred EEEEEccCChhhCeEEEEEEEcCCCCcc-----ceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEE
Confidence 4799999999999999999999887532 22444443111 11222233345678889999999999999999999
Q ss_pred EEEECCEEeecCCcEEEEecCCeeEEEEee-cCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeC
Q psy8139 485 SWYKDGFEIFSSRRQRIVTDNDISTLIIHQ-AALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMG 563 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~-l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g 563 (1101)
.|++++..+....++.+...+....|.|.+ +...|.|.|+|.|.|..|....+..|.|..+|..+.... +....+
T Consensus 137 ~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~----~~~~~~ 212 (305)
T 2nzi_A 137 TWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVK----VSDVSR 212 (305)
T ss_dssp EEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEE----EESCCS
T ss_pred EEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCce----eeeccC
Confidence 999999888777777777777777999999 999999999999999999998889999987664321110 011134
Q ss_pred CEEEEEEEEeecC--CCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEE
Q psy8139 564 EIIKLKVSMAGMP--PPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASF 634 (1101)
Q Consensus 564 ~~~~l~c~~~g~p--~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~ 634 (1101)
..+.|.|...... .+.+.+.....+... ..+..........+.|.+|.+++.|.|+|.|.|..|.+..+.
T Consensus 213 ~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~-~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 213 DSVNLTWTEPASDGGSKITNYIVEKCATTA-ERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSE 284 (305)
T ss_dssp SCEEEEEECCSCCSBSCEEEEEEEEEETTS-CCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred CEEEEEEcCCccCCCCceeEEEEEEecCCC-CccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence 4455555532111 111111111111111 122222222256799999999999999999999999876543
No 107
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.75 E-value=2.9e-17 Score=173.66 Aligned_cols=197 Identities=21% Similarity=0.319 Sum_probs=148.6
Q ss_pred CCCeeeecC----ceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEE-EEecCCeeEEEEeecCCCCCEEEEE
Q psy8139 451 AAPSFIRAL----HDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQR-IVTDNDISTLIIHQAALMDEGEIKC 525 (1101)
Q Consensus 451 ~~P~~~~~p----~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~-~~~~~~~~~l~I~~l~~~d~g~Y~C 525 (1101)
.+|.|...+ ....+..|+++.|.|.+.+.|.+.+.|++++..+.....+. .....+...|.|.++...|+|.|+|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 93 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEE
Confidence 456665555 67889999999999999999999999999999886543321 0112233489999999999999999
Q ss_pred EEEeCCCceEEEEEEeeccCCccc--cCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEE----CCeecCCCCceEE--
Q psy8139 526 TATNRAGHSITKARLRLEAPPTIR--LPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLH----NGEPLTSGGRYEI-- 597 (1101)
Q Consensus 526 ~a~n~~g~~~~s~~l~V~~~p~~~--~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~----~g~~l~~~~~~~~-- 597 (1101)
.+.|..|.......|.|..++... ..........+..|..+.|.|.+.+.|.+.+.|++ +|..+..+.....
T Consensus 94 ~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 173 (231)
T 3ojm_B 94 VVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKV 173 (231)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEE
T ss_pred EEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeE
Confidence 999999988888888887643221 11112345678889999999999999999999999 7776654332111
Q ss_pred Ee-----ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCc
Q psy8139 598 TH-----TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGK 647 (1101)
Q Consensus 598 ~~-----~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~ 647 (1101)
.. .....+|.|.++...|.|.|+|.|.|..|....+..+.|..+|.+|..
T Consensus 174 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~~ 228 (231)
T 3ojm_B 174 LKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGR 228 (231)
T ss_dssp EEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-----
T ss_pred ecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCcc
Confidence 11 112457999999999999999999999999999999999999888854
No 108
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.74 E-value=6.1e-17 Score=165.65 Aligned_cols=181 Identities=23% Similarity=0.312 Sum_probs=143.8
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccC-CCeEEEEE-CCEEee-cCCcEEEEe-cCCeeEEEEeecCCCCCEEEEEEE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIP-TPKVSWYK-DGFEIF-SSRRQRIVT-DNDISTLIIHQAALMDEGEIKCTA 527 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p-~~~v~W~~-~g~~~~-~~~~~~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a 527 (1101)
++.+...|.+..+..|++++|.|.+.+.| .+.+.|++ +|..+. ...++.+.. ......|.|.++...|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 34566778888999999999999999977 78999999 887776 344555443 256679999999999999999999
Q ss_pred EeCCC-ceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCC--CceEEEeecceE
Q psy8139 528 TNRAG-HSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSG--GRYEITHTDRYL 604 (1101)
Q Consensus 528 ~n~~g-~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~ 604 (1101)
.|..| .......|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+.+.|++++..+... .++.... ++
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~ 155 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPT---PQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS---NN 155 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCS---SEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECT---TS
T ss_pred EcCCCcceEEEEEEEeecCceEecCCC---cEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEec---CC
Confidence 99984 455567888888887765543 346788999999999999999999999999988532 3343332 34
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 605 NLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 605 sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
+|.|.++...|.|.|+|.|.|..|.......+.+
T Consensus 156 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 156 YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred eEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 7999999999999999999999876655555444
No 109
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.74 E-value=1.1e-15 Score=177.08 Aligned_cols=437 Identities=11% Similarity=0.029 Sum_probs=244.4
Q ss_pred CCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEEEecC
Q psy8139 350 KPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVV 429 (1101)
Q Consensus 350 ~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~ 429 (1101)
.|..+.|. .-+-.....+|.+|.. .+.-..|.+..... +....+ ...+.+.|..+.++|. .++..-..
T Consensus 6 ~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~-- 73 (488)
T 2q7n_A 6 DDKDLKCT-TNNMRVWDCTWPAPLG--VSPGTVKDICIKDR-FHSCHP-----LETTNVKIPALSPGDH-EVTINYLN-- 73 (488)
T ss_dssp ---CCCCE-ESSSSEEEEECCCCSS--SCCSCEEEEEEESS-SEEEEE-----CSSSEEEEECCCSSCE-EEEEEESS--
T ss_pred CCccceeE-ecCceEEEEeeeCcCc--cCCCceEEEEEecC-CceeEE-----eccceeEcccCCCCcc-eEEEeecc--
Confidence 46677777 6667889999999943 33445677765431 111121 3456899999999994 66665222
Q ss_pred CCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEc---cCCeEEEEEEEeccC--CC-eEEEEEC----CE--EeecCC
Q psy8139 430 GFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTAL---EDEKVEFTVQVEGIP--TP-KVSWYKD----GF--EIFSSR 497 (1101)
Q Consensus 430 G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~---~g~~v~L~C~~~g~p--~~-~v~W~~~----g~--~~~~~~ 497 (1101)
+. .....+...... .+...|..+.+. .-..+.|.+...+.. .. .+.|.-. .. .+.. .
T Consensus 74 ~~--------~~~~~~~~~~~~--~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~ 142 (488)
T 2q7n_A 74 GF--------QSKFTLNEKDVS--LIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVAL-V 142 (488)
T ss_dssp SC--------EEEEEECSTTCE--ECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEEEEECCCSSSSCSCCC-E
T ss_pred Cc--------eeEEEEecCccc--cCCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEEEEEEEEeccceEEEE-E
Confidence 11 112222111110 012233333222 224455555444332 11 2444311 00 0000 0
Q ss_pred cEEEEecCC--eeEEEEeecCCC--CCEEEEEEEEe----CCCce---EEE--EEEeeccCCccccCCCCCCCeEEeeCC
Q psy8139 498 RQRIVTDND--ISTLIIHQAALM--DEGEIKCTATN----RAGHS---ITK--ARLRLEAPPTIRLPKQYEDGLLFEMGE 564 (1101)
Q Consensus 498 ~~~~~~~~~--~~~l~I~~l~~~--d~g~Y~C~a~n----~~g~~---~~s--~~l~V~~~p~~~~~~~~~~~~~v~~g~ 564 (1101)
.+.....+. ...-......+. ..+..+.+... ..|.. ..+ -.+.+..+..+...|. ...+..|+
T Consensus 143 ~~~~~~~~~~~~~~w~w~s~~pl~c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~t~i~v~P~---~~~v~~Gs 219 (488)
T 2q7n_A 143 LLNTMLSGKDTVQHWNWTSDLPLQCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQ---DKVVLAGS 219 (488)
T ss_dssp ECCEECSSSCBCCEEEEECSSCCSSSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCCCCSSCCEECT---TCEEESSC
T ss_pred EEEEEecCCCceeEeeccCCCcccccceEEEEEEEeccccccCCCCCcCCCChhhcCCcCCCceEECCC---CCEEcCCC
Confidence 000000111 111222222222 24455555543 11221 112 2334444444444443 33688999
Q ss_pred EEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCC
Q psy8139 565 IIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLP 644 (1101)
Q Consensus 565 ~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~ 644 (1101)
+++|.|.+. .+.+.|.++|..+... . ..+....|+|.++...+.|.|.|.+.+ +.....+.+.+..+|++
T Consensus 220 ~vtl~C~a~---~~~I~W~~ng~~i~~~---r--i~~~~~~L~I~nl~~sd~g~y~~~C~~--~~~i~~~~l~v~~pP~~ 289 (488)
T 2q7n_A 220 NMTICCMSP---TKVLSGQIGNTLRPLI---H--LYGQTVAIHILNIPVSENSGTNIIFIT--DDDVYGTVVFAGYPPDV 289 (488)
T ss_dssp CCEEEECCS---SCEEEEEETTEECCCE---E--CSSSCEEEECCSCCCCCSSCEEEEEEE--SSCEEEEEEEEECCCCC
T ss_pred CEEEEEECC---CCEEEEEECCEECchh---h--ccceEEEEEEeCCCcccCCcEEEEEEc--CCeEEEEEEEeeCCCCC
Confidence 999999988 4699999999887643 1 244577899999999988888887763 33344778888899999
Q ss_pred CCccEEEEecCCeEEEEeecCCCC--CCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceE
Q psy8139 645 PGKAKVVMTLGKSVTLSWSEPEDD--GGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGY 722 (1101)
Q Consensus 645 P~~~~~~~~~~~sv~lsW~~p~~~--~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y 722 (1101)
|.++.+......+++++|.++.+. +|.+++.|.|.|
T Consensus 290 P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y------------------------------------------ 327 (488)
T 2q7n_A 290 PQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFE------------------------------------------ 327 (488)
T ss_dssp CCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEE------------------------------------------
T ss_pred CcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEE------------------------------------------
Confidence 999998887888999999977654 234455555555
Q ss_pred EEEEEeCCCC-CceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc--ccc
Q psy8139 723 LVEHRRTGSP-YWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR--ALH 799 (1101)
Q Consensus 723 ~V~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~--~~~ 799 (1101)
+..+.. .|.......+....+++..+..++.|.|+|.|.|..|.++ | ..........++.||.++. ...
T Consensus 328 ----~~~g~~~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S---~~~~~~~~~v~P~PP~nl~v~~~s 399 (488)
T 2q7n_A 328 ----SISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-S---AVVINVTERVAPHDPTSLKVKDIN 399 (488)
T ss_dssp ----TTTCCEEEEECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE-E---EEECCGGGTBCCCCCEEEEEEECS
T ss_pred ----EECCCCCCCccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc-c---eEEEEecCCCCCCCCeEEEEEecC
Confidence 322110 1111111113345667754444699999999999999843 3 2222233456788888876 345
Q ss_pred ccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCc-eeeee---cccc--ccCCCC
Q psy8139 800 DTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDD-YDIVE---TNEH--TGTGAP 873 (1101)
Q Consensus 800 ~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~-~~~v~---~~~~--~~~~~~ 873 (1101)
++...+.|.||. ..++.++ .|.|.|+..+. ..|. ...+. ...+ .+.+|.
T Consensus 400 ~~sl~LsW~pP~------------~~~g~~l------------~YeV~Yr~~~~-~~w~~~~~~~~~~~~~~~v~l~~L~ 454 (488)
T 2q7n_A 400 STVVTFSWYLPG------------NFTKINL------------LCQIEICKANS-KKEVRNATIRGAEDSTYHVAVDKLN 454 (488)
T ss_dssp TTCEEEEEEEEE------------ECSSSEE------------EEEEEEBCTTS-CCEEEEEEEECCEEEEEEEEECSCC
T ss_pred CCEEEEEEeCCC------------CCCCcce------------EEEEEEEECCC-CCceEEEEEecCCCcEEEEEeCCCC
Confidence 667888897742 2234556 99999998753 3453 22221 1223 445555
Q ss_pred CCCCCccCcccce--eeccccccc------CceeecccCC
Q psy8139 874 SDNENESDYFPEK--TIDESVYGY------DTIVYGYDSD 905 (1101)
Q Consensus 874 ~~l~~~~~~t~Y~--V~a~n~~G~------~~~v~~~t~e 905 (1101)
+++.|+ |+|.| .|. |..+...|.+
T Consensus 455 -------P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e 486 (488)
T 2q7n_A 455 -------PYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTE 486 (488)
T ss_dssp -------SSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCC
T ss_pred -------CCceEEEEEEEEE-CCCCCCCCCcCCEeEECCC
Confidence 999999 99998 553 5555555544
No 110
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.74 E-value=1.4e-16 Score=172.09 Aligned_cols=243 Identities=16% Similarity=0.143 Sum_probs=177.4
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCC-eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTP-KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.|.+...|.+..+.+|+++.|.|.+.+.|.+ .+.|+++|..+... ...|.|.++...|+|.|+|.+.|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~----------~~~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPSYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEESSS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc----------CCeEEEecCCcccCeEEEEEEecC
Confidence 3667778888899999999999999999888 99999999887542 237999999999999999999886
Q ss_pred CCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEE-eecCCCeeEEEECCeecCCCCceEEEeecceEEEEEc
Q psy8139 531 AGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSM-AGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRIS 609 (1101)
Q Consensus 531 ~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~-~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~ 609 (1101)
.+.. ...|.|..++....++ ...+..|+.+.|.|.+ .+.|.+.+.|+++|..+.. ......|.|.
T Consensus 71 ~~s~--~~~l~v~~~~~~~~~~----~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~--------~~~~~~l~i~ 136 (262)
T 3rjd_A 71 GRSD--PIQLEIHRGWLLLQVS----SRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF--------FHWNSNLTIL 136 (262)
T ss_dssp CCCC--CEEEEEECSSEEEEES----CSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE--------EEECCCEEES
T ss_pred Cccc--cEEEEEeccceEecCC----CeEEecCCeEEEEEEccCCCCCceEEEEECCccccc--------cCCCCeEEEE
Confidence 6543 4566776655433222 2367789999999999 6778899999999877642 1225679999
Q ss_pred cCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCc---cEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCC
Q psy8139 610 DARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGK---AKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGP 686 (1101)
Q Consensus 610 ~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~---~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~ 686 (1101)
++...|.|.|+|.|.|..|..+....+.|...+.+|.- .......+..+.|+|.....+..
T Consensus 137 ~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~---------------- 200 (262)
T 3rjd_A 137 KTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQR---------------- 200 (262)
T ss_dssp SCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----------------
T ss_pred ECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCC----------------
Confidence 99999999999999999987777788888865444411 11123457788999986432110
Q ss_pred CCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEc
Q psy8139 687 PGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAEN 766 (1101)
Q Consensus 687 p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 766 (1101)
....+.+.|... +..+ . .......++|.++.+.....|.|.|.|
T Consensus 201 -------------p~~~~~~~w~~~----~~~~------------------~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n 244 (262)
T 3rjd_A 201 -------------PGLQLYFSFYMG----SKTL------------------R-GRNTSSEYQILTARREDSGLYWCEAAT 244 (262)
T ss_dssp -----------------EEEEEEET----TEEE------------------E-EEESCCEEEESSCCGGGCEEEEEEEEE
T ss_pred -------------CCccEEEEEEeC----CcEe------------------c-ccCCCceEEEEEechhhCeEEEEEEEc
Confidence 011234455431 1101 0 002445789999999999999999999
Q ss_pred CCcc
Q psy8139 767 VVGF 770 (1101)
Q Consensus 767 ~~G~ 770 (1101)
..|.
T Consensus 245 ~~G~ 248 (262)
T 3rjd_A 245 EDGN 248 (262)
T ss_dssp TTSS
T ss_pred ccCc
Confidence 9995
No 111
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=2.3e-18 Score=193.69 Aligned_cols=266 Identities=21% Similarity=0.294 Sum_probs=116.7
Q ss_pred cCceeEEccCCeEEEEEEEecc-CCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGI-PTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT 536 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~-p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~ 536 (1101)
.|.+..+.+|+++.|.|.+.+. |.+.+.|+++|..+....++.+ ....|.|.++...|+|.|+|.|.|. |....
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~ 88 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV----GPQRLQVLNASHEDSGAYSCRQRLT-QRVLC 88 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe----ccceEEEeecccccCEEEEEEEEeC-CeEEE
Confidence 4778889999999999999887 6789999999988866554443 1248999999999999999999998 76666
Q ss_pred EEEEeeccCCc----------------------cccCCCC-CCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCC
Q psy8139 537 KARLRLEAPPT----------------------IRLPKQY-EDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGG 593 (1101)
Q Consensus 537 s~~l~V~~~p~----------------------~~~~~~~-~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~ 593 (1101)
...|.|..+|. +..+... .....+..|+.+.|.|.+.|.|.+.+.|++++..+....
T Consensus 89 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~ 168 (334)
T 1ry7_B 89 HFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEH 168 (334)
T ss_dssp ------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTS
T ss_pred EEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccc
Confidence 67777765432 2222111 123567889999999999999999999999998886543
Q ss_pred ce-EEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCC-CCCC-----ccEEEEecCCeEEEEeecCC
Q psy8139 594 RY-EITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRP-LPPG-----KAKVVMTLGKSVTLSWSEPE 666 (1101)
Q Consensus 594 ~~-~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P-~~P~-----~~~~~~~~~~sv~lsW~~p~ 666 (1101)
.+ .........+|.|.++...|.|.|+|.|.|..|.......+.|...+ .+|. ........+..+.|.|...+
T Consensus 169 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g 248 (334)
T 1ry7_B 169 RIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYS 248 (334)
T ss_dssp STTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBC
T ss_pred cccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEec
Confidence 32 12223346689999999999999999999999988888888887643 2221 11234456778899888532
Q ss_pred CCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeec------cc
Q psy8139 667 DDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRAS------PH 740 (1101)
Q Consensus 667 ~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~------~~ 740 (1101)
. ....+.|......+|..+.. ++....... ..
T Consensus 249 ~----------------------------------p~p~v~W~~~~~~~g~~~~~--------~~~~~~~~~~~~~~~~~ 286 (334)
T 1ry7_B 249 D----------------------------------AQPHIQWLKHVEVNGSKVGP--------DGTPYVTVLKTAGANTT 286 (334)
T ss_dssp S----------------------------------SCEEEEEEECCCGGGCSBCT--------TSSBCCCCCCCSSCSCS
T ss_pred C----------------------------------CCCeEEEEECCcCCCccccC--------CCCeeEEEeecCccccc
Confidence 1 12356775421111211100 000000000 00
Q ss_pred ccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 741 MVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 741 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
......++|.++.......|.|.|.|..|.
T Consensus 287 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 316 (334)
T 1ry7_B 287 DKELEVLSLHNVTFEDAGEYTCLAGNSIGF 316 (334)
T ss_dssp CTTCCCEEECSCCTTSCSEEEEEEEESSCC
T ss_pred cccccEEEEccCCHHHCEEEEEEEeCCCCe
Confidence 122347899999999999999999999996
No 112
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.74 E-value=3.6e-17 Score=174.39 Aligned_cols=197 Identities=21% Similarity=0.353 Sum_probs=143.1
Q ss_pred CCCeeeec----CceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcE-EEEecCCeeEEEEeecCCCCCEEEEE
Q psy8139 451 AAPSFIRA----LHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQ-RIVTDNDISTLIIHQAALMDEGEIKC 525 (1101)
Q Consensus 451 ~~P~~~~~----p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~-~~~~~~~~~~l~I~~l~~~d~g~Y~C 525 (1101)
.+|.|... +..+.+.+|+++.|.|.+.+.|.+.+.|++++..+...... ..........|.|.++...|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 45666533 34788999999999999999999999999999988654322 11112233489999999999999999
Q ss_pred EEEeCCCceEEEEEEeeccCCcc--ccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEE----CCeecCCCCceEEE-
Q psy8139 526 TATNRAGHSITKARLRLEAPPTI--RLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLH----NGEPLTSGGRYEIT- 598 (1101)
Q Consensus 526 ~a~n~~g~~~~s~~l~V~~~p~~--~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~----~g~~l~~~~~~~~~- 598 (1101)
.+.|..|.......|.|...+.. ...........+..|..+.|.|.+.+.|.+.+.|++ +|..+..+......
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 169 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 169 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee
Confidence 99999998888888888653211 111111234567789999999999999999999999 78777544322111
Q ss_pred -------eecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCc
Q psy8139 599 -------HTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGK 647 (1101)
Q Consensus 599 -------~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~ 647 (1101)
.......|.|.++...|.|.|+|.|.|..|....+..|.|..+|.+|..
T Consensus 170 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~ 225 (241)
T 3grw_A 170 LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEE 225 (241)
T ss_dssp EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---------
T ss_pred eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCcc
Confidence 1123568999999999999999999999999999999999988877744
No 113
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.74 E-value=1.8e-17 Score=181.52 Aligned_cols=249 Identities=13% Similarity=0.018 Sum_probs=165.5
Q ss_pred EEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCC
Q psy8139 634 FLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEY 713 (1101)
Q Consensus 634 ~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~ 713 (1101)
..+....+|.+|.++.+...+.+++.|+|++|.
T Consensus 7 ~~~~~~~~p~~P~~l~~~~~~~~sv~l~W~~~~----------------------------------------------- 39 (283)
T 1tdq_A 7 GGGGGIPVIDGPTQILVRDVSDTVAFVEWTPPR----------------------------------------------- 39 (283)
T ss_dssp -----CCSSCCCEEEEEEEECSSCEEEEEECCS-----------------------------------------------
T ss_pred cccccccCCCCCcEEEEEecCCCeEEEEEECCC-----------------------------------------------
Confidence 344556788999999888888888888888653
Q ss_pred CCCCCcceEEEEEEeCCC-CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCC
Q psy8139 714 DGGSPVLGYLVEHRRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAP 792 (1101)
Q Consensus 714 ~~~~~i~~Y~V~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p 792 (1101)
+++.+|.|.|+.... ..|..... ....++++|.+|.|++.|.|+|.|.|..|.|.+ ... ... .++.+|
T Consensus 40 ---~~~~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~---~~~-~~~---t~p~~P 108 (283)
T 1tdq_A 40 ---AKVDFILLKYGLVGGEGGKTTFRL-QPPLSQYSVQALRPGSRYEVSISAVRGTNESDA---SST-QFT---TEIDAP 108 (283)
T ss_dssp ---SCCSEEEEEEEESSSSCCCEEEEE-CTTCSEEEECSCCTTCEEEEEEEEEETTEECCC---EEE-EEE---CCCCCC
T ss_pred ---CceeEEEEEEEEecCCCCcEEEEe-CCCCCEEEecCCCCCCEEEEEEEEECCCCCCCC---eeE-EEE---CCCCCC
Confidence 236778888765432 34433322 367889999999999999999999999998653 222 222 345555
Q ss_pred cccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeee-----cc
Q psy8139 793 SFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVE-----TN 865 (1101)
Q Consensus 793 ~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~-----~~ 865 (1101)
.++. ...++++.+.|.++. +++. .|.|.|+..+. ..|....+. ..
T Consensus 109 ~~l~~~~~~~~sv~l~W~~p~---------------~~i~------------~Y~v~~~~~~~-~~~~~~~~~~~~~~~~ 160 (283)
T 1tdq_A 109 KNLRVGSRTATSLDLEWDNSE---------------AEAQ------------EYKVVYSTLAG-EQYHEVLVPKGIGPTT 160 (283)
T ss_dssp EEEEEEEECSSCEEEEEECCS---------------SCCS------------EEEEEEEETTC-CCCEEEEEECCSSSEE
T ss_pred CceEEEecCCCeEEEEecCCC---------------CCcc------------EEEEEEEeCCC-CcceEEECCCCCcccc
Confidence 5554 456677888897743 2345 89998877653 334343332 22
Q ss_pred ccccCCCCCCCCCccCcccce--eecccccccCceeecccCCCCccCCCCCChhhhhhhhhhhccccccccccchhhccc
Q psy8139 866 EHTGTGAPSDNENESDYFPEK--TIDESVYGYDTIVYGYDSDDLDRHYPTLDEEEEEEDRESLVKDRESSVKGKEEEAKV 943 (1101)
Q Consensus 866 ~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~~~~v~~~t~e~~P~~~P~~v~~~~~~~n~t~v~vp~~~~nG~i~gY~I 943 (1101)
.+.+.+|. +++.|. |+|.|..|.+......+... ..+|.++.+... +.++|.|-+..++|.|.+|.|
T Consensus 161 ~~~i~~L~-------p~t~Y~~~V~A~n~~g~s~~~~~~~~t~--~~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v 229 (283)
T 1tdq_A 161 KTTLTDLV-------PGTEYGVGISAVMNSKQSIPATMNARTE--LDSPRDLMVTAS--SETSISLIWTKASGPIDHYRI 229 (283)
T ss_dssp EEEECSCC-------TTCEEEEEEEEEETTEECCCEEEEEECC--CCCCEEEEEEEE--CSSCEEEEEECCCSCCSEEEE
T ss_pred eEEEecCC-------CCCEEEEEEEEEeCCCCCcceEEEecCC--CCCCCccEEeEe--cCCEEEEEEeCCCCcccEEEE
Confidence 33444444 999999 99999998833332222222 237788998887 566666644445799999999
Q ss_pred ccchhhhhhcccccccccccccCCceeEeecCCCCCCCceeec
Q psy8139 944 IKDDEYYENLGDVLTKKYSLPVNSDIQIKIDKPDDEPDYVIKG 986 (1101)
Q Consensus 944 ~~~~~~y~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 986 (1101)
+|...++... ...+ ......+.|.+|.+|+.|.|+.
T Consensus 230 -----~~~~~~~~~~-~~~~-~~~~~~~~i~~L~p~t~Y~~~V 265 (283)
T 1tdq_A 230 -----TFTPSSGISS-EVTV-PRDRTSYTLTDLEPGAEYIISI 265 (283)
T ss_dssp -----EEECSSSCCE-EEEE-ESSCSEEEECCCCTTCCEEEEE
T ss_pred -----EEEcCCCCee-EEEe-CCCccEEEECCCCCCCEEEEEE
Confidence 8877665322 2222 2455689999999999999998
No 114
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.74 E-value=3.9e-17 Score=169.31 Aligned_cols=190 Identities=19% Similarity=0.281 Sum_probs=135.2
Q ss_pred EecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCC
Q psy8139 638 VTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGS 717 (1101)
Q Consensus 638 v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~ 717 (1101)
|.++|++|.++.+.. +.+++.|+|++|. ++++
T Consensus 2 v~~~P~~P~~~~~~~-~~~sv~l~W~~p~-----------------------------------------------~~~~ 33 (205)
T 1cfb_A 2 VQDVPNAPKLTGITC-QADKAEIHWEQQG-----------------------------------------------DNRS 33 (205)
T ss_dssp CCCCCCCCEEEEEEE-CSSEEEEEEECCC-----------------------------------------------CTTS
T ss_pred cccCCCCCCCcEEEe-cCCEEEEEEECcc-----------------------------------------------cCCC
Confidence 346777887777777 7777777777553 3345
Q ss_pred CcceEEEEEEeCCC-CCceeec-ccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCC-CCCcEEecCCCCCCCCCcc
Q psy8139 718 PVLGYLVEHRRTGS-PYWVRAS-PHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGP-LSEPLTVTYQRSPAAAPSF 794 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~~-~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~-~s~~~t~~~~~~P~~~p~~ 794 (1101)
+|.+|.|+|+.... ..|.... ......+.+.+ +|.|++.|.|+|.|.|..|.|++|. ...+.+.. ..|+.+|.+
T Consensus 34 ~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~--~~P~~~P~~ 110 (205)
T 1cfb_A 34 PILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQP--DVPFKNPDN 110 (205)
T ss_dssp CCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECC--CCCSCCCSC
T ss_pred ceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCC--cCCCCCCee
Confidence 67888888876543 5675432 22245677787 9999999999999999999999884 34444433 667778877
Q ss_pred cc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeec---ccccc
Q psy8139 795 IR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVET---NEHTG 869 (1101)
Q Consensus 795 ~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~---~~~~~ 869 (1101)
+. ....+++.+.|.||.. ...++++. +|.|.|+..+....|....+.. ..+.+
T Consensus 111 ~~~~~~~~~sv~l~W~~p~~----------~~~ng~i~------------~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (205)
T 1cfb_A 111 VVGQGTEPNNLVISWTPMPE----------IEHNAPNF------------HYYVSWKRDIPAAAWENNNIFDWRQNNIVI 168 (205)
T ss_dssp CEEECSSTTCEEEECCCCCG----------GGTCSSSC------------EEEEEEEESSTTCCCEEEEECCTTCCEEEE
T ss_pred eEeecCCCCeEEEEEECCCc----------cccCCCce------------EEEEEEEECCCCCCcEEEEecCCCccEEEE
Confidence 65 4455678889987531 13556677 9999999888776687766532 34444
Q ss_pred CCCCCCCCCccCcccce--eeccccccc----CceeecccCCCC
Q psy8139 870 TGAPSDNENESDYFPEK--TIDESVYGY----DTIVYGYDSDDL 907 (1101)
Q Consensus 870 ~~~~~~l~~~~~~t~Y~--V~a~n~~G~----~~~v~~~t~e~~ 907 (1101)
.+|. +++.|. |+|.|..|. +..+..+|+|++
T Consensus 169 ~~L~-------p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~e~v 205 (205)
T 1cfb_A 169 ADQP-------TFVKYLIKVVAINDRGESNVAAEEVVGYSGEDR 205 (205)
T ss_dssp CSCC-------SSCEEEEEEEEEETTEECSSCCCCEEEESSSCC
T ss_pred cCCC-------CCcEEEEEEEEEcCCCcCCCCCCcEEEecCCCC
Confidence 4444 999999 999999997 467888898874
No 115
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.74 E-value=1e-18 Score=197.09 Aligned_cols=222 Identities=17% Similarity=0.190 Sum_probs=161.2
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEE-----Eecc
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQ-----VEGI 479 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~-----~~g~ 479 (1101)
+..|.|.+++..|.|.|+|.|.|..|... ..+.+.+...+...+ ........+..|+++.|.|. +.|.
T Consensus 80 ~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~-----~~~~l~V~~~~~~~~--~~~~~~~~~~~g~~v~l~C~~~~~~~~g~ 152 (339)
T 3o4o_C 80 DGALWLLPALQEDSGTYVCTTRNASYCDK-----MSIELRVFENTDAFL--PFISYPQILTLSTSGVLVCPDLSEFTRDK 152 (339)
T ss_dssp TTEEEESSBCTTCCEEEECCEEETTEEEE-----EEEEEEEECSCGGGH--HHHCEEEEEETTSCEEEECCSCTTTCCSS
T ss_pred CCeEEECCCCcccCEEEEEEEECCcceEE-----EEEEEEEEcCCCccc--cccccceEEECCCCEEEEecCCcccccCC
Confidence 46899999999999999999999877432 234455443221111 11222346889999999999 8899
Q ss_pred CCCeEEEEECCEEeecC-CcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCc----eEEEEEEeecc-----CCccc
Q psy8139 480 PTPKVSWYKDGFEIFSS-RRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGH----SITKARLRLEA-----PPTIR 549 (1101)
Q Consensus 480 p~~~v~W~~~g~~~~~~-~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~----~~~s~~l~V~~-----~p~~~ 549 (1101)
|.+.+.|+++|..+... .++.... +...|.|.++...|+|.|+|.|.|..|. ....+.|.|.. +|.+.
T Consensus 153 p~~~v~W~k~g~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~ 230 (339)
T 3o4o_C 153 TDVKIQWYKDSLLLDKDNEKFLSVR--GTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVII 230 (339)
T ss_dssp SCCCBCCEESSCBCCTTCSSEEECT--TSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEEC
T ss_pred CCceEEEecCCeeCCCCCceeEEcC--CcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEe
Confidence 99999999999887655 3443332 2248999999999999999999998874 44567777764 34444
Q ss_pred cCCCCCCCeEEeeCCEEEEEEEE---eecC-CCeeEEEECCeecCCC---------CceEEEeecc---eEEEEEccCCC
Q psy8139 550 LPKQYEDGLLFEMGEIIKLKVSM---AGMP-PPTARWLHNGEPLTSG---------GRYEITHTDR---YLNLRISDARR 613 (1101)
Q Consensus 550 ~~~~~~~~~~v~~g~~~~l~c~~---~g~p-~~~v~W~~~g~~l~~~---------~~~~~~~~~~---~~sl~i~~l~~ 613 (1101)
.++ ....+..|+.+.|.|.+ .|.| .+.+.|+++|..+... ..+.+...+. ...|.|.++..
T Consensus 231 ~~~---~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~ 307 (339)
T 3o4o_C 231 SPL---KTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTR 307 (339)
T ss_dssp CCS---CCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCC
T ss_pred cCC---ceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEech
Confidence 332 33467789999999999 8888 8999999998876421 2222222221 22799999999
Q ss_pred CCC-eEEEEEEEeCCCCceeEEEEEE
Q psy8139 614 ADR-GEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 614 ~~~-y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
.|. |.|+|.|.|..|..+..+.+.+
T Consensus 308 ~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 308 EDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp CSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred hhcCccEEEEEEeccCceEEEEEhhH
Confidence 997 9999999999998776655443
No 116
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.73 E-value=3.7e-17 Score=166.86 Aligned_cols=182 Identities=24% Similarity=0.418 Sum_probs=141.7
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeec--CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFS--SRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~--~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
+|.|...|.+..+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++.....+ .|.|.++...|+|.|+|.+.|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEE
Confidence 57778888889999999999999999999999999999887653 3344433222 799999999999999999999
Q ss_pred CCCceE--EEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEE
Q psy8139 530 RAGHSI--TKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLR 607 (1101)
Q Consensus 530 ~~g~~~--~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~ 607 (1101)
..+... ....+.|..+|.+...+.. ....+..|..+.|.|.+.+.|.+.+.|+++|..+.....+.+. .....|.
T Consensus 79 ~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~ 155 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPPAISMPQKS-FNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELT 155 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECSCCE-EEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEE--TTTTEEE
T ss_pred cCCCceEEEEEEEEecCCCCccccccc-ccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEe--cCCCEEE
Confidence 876543 3456777777766543321 1234567999999999999999999999999998876665543 3356899
Q ss_pred EccCCCCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy8139 608 ISDARRADRGEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
|.++...|.|.|+|.|.|..|....+..+.|.
T Consensus 156 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 156 VRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 99999999999999999999998888777764
No 117
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.73 E-value=7e-17 Score=186.86 Aligned_cols=294 Identities=8% Similarity=-0.065 Sum_probs=138.6
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE----ecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEE
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV----TDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIV 678 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v----~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v 678 (1101)
.+.++..+|.+...|.++|.|.| .|.+..+....+ ...++||. +.+.. ..+++.|+|. |...+|..
T Consensus 64 ~~~~t~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~~~~~~~~~~~pP~-v~~~~-~~~si~v~w~-P~~~~g~~------ 133 (414)
T 3se4_A 64 KCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEA-EDKAIVIHIS-PGTKDSVM------ 133 (414)
T ss_dssp CEECCSSCCCTTSCEEEEEEEEE-TTEEEEEECCCBCHHHHCCCCCCE-EEEEE-CSSCEEEEEE-CSSSSCTT------
T ss_pred EEECCcccccCCCcEEEEEEEee-CCcCCCEecCceeecccceeCCCe-EEEEE-cCCEEEEEEE-cCCCCCce------
Confidence 34455567899999999999999 444433222111 12345554 55443 3457778887 54222200
Q ss_pred EEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceE
Q psy8139 679 EYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRY 758 (1101)
Q Consensus 679 ~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 758 (1101)
|. .++.+.+|.|.|...++..+.... ...++++|.+|.|++.|
T Consensus 134 -----------------------------~~-----~~~~~~~Y~v~y~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y 176 (414)
T 3se4_A 134 -----------------------------WA-----LDGLSFTYSLVIWKNSSGVEERIE---NIYSRHKIYKLSPETTY 176 (414)
T ss_dssp -----------------------------TG-----GGGSSCEEEEEEEETTTCCEEEEE---EECSEEEECCCCTTCEE
T ss_pred -----------------------------ee-----eecCcEEEEEEEEECCCCceEEEe---cCCcEEEEcCCCCCCeE
Confidence 00 013578999999988776543322 45688999999999999
Q ss_pred EEEEEEEcC--CccCCCCCCCCcEEecCCCCCCCCCcccc-cccccceeccccCCCCCCccccceeeeecCcchhHHHHh
Q psy8139 759 QFRITAENV--VGFSEPGPLSEPLTVTYQRSPAAAPSFIR-ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFML 835 (1101)
Q Consensus 759 ~~~V~A~n~--~G~g~~S~~s~~~t~~~~~~P~~~p~~~~-~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v 835 (1101)
.|+|.|.|. .|.|++|+...+.+. ++.|+.+|.++. ...+++.++.|.||. ...
T Consensus 177 ~~~V~A~n~~~~g~g~~S~~~~~~t~--~~~~~~~P~~v~~~~~~~~~~l~W~pp~----------------~~~----- 233 (414)
T 3se4_A 177 CLKVKAALLTSWKIGVYSPVHCIKTT--VENELPPPENIEVSVQNQNYVLKWDYTY----------------ANM----- 233 (414)
T ss_dssp EEEEEEECTTTCCEEEECCCEEEECC--SCCSSCCCEEEEEEEETTEEEEEEECSS----------------SSC-----
T ss_pred EEEEEEEeccCCCCCccCcccccccc--cccccCCCCccEEEEecCCeEEEECCCC----------------CCe-----
Confidence 999999994 688888766543333 356777888776 333456778897742 122
Q ss_pred HhhhceeeEEeeeecc-------CCCCCCceeeeeccccccCCCCCCCC-CccCcccce--eeccccccc---Cceeecc
Q psy8139 836 LMLFTFIETISSFRDK-------YVDNEDDYDIVETNEHTGTGAPSDNE-NESDYFPEK--TIDESVYGY---DTIVYGY 902 (1101)
Q Consensus 836 ~~~~~~~~Y~v~~r~~-------~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~~t~Y~--V~a~n~~G~---~~~v~~~ 902 (1101)
+|.|.|+.. +....|.....-. .......++. ++.+++.|. |+|.|..|. +..+...
T Consensus 234 -------~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~---~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~ 303 (414)
T 3se4_A 234 -------TFQVQWLHAFLKRNPGNHLYKWKQIPDCE---NVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFD 303 (414)
T ss_dssp -------EEEEEEEESGGGSCCCC--CCCCBCSTTT---TBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEE
T ss_pred -------EEEEEEEehhccccccccccCceECCCcc---CCCCCEEcCCcccccCccEEEEEEEecCCCccccccccccc
Confidence 788877753 1234565421000 0111112222 355888899 999999987 5567777
Q ss_pred cCCCCccCCCCCChhhhhhhhhhhccc-cccccc------cchhhcccccchhhhhhcccccccccccccCCceeEeecC
Q psy8139 903 DSDDLDRHYPTLDEEEEEEDRESLVKD-RESSVK------GKEEEAKVIKDDEYYENLGDVLTKKYSLPVNSDIQIKIDK 975 (1101)
Q Consensus 903 t~e~~P~~~P~~v~~~~~~~n~t~v~v-p~~~~n------G~i~gY~I~~~~~~y~~~~~~~~~~~~l~~~~~~~~~i~~ 975 (1101)
+.+++|..||. +.+... .++..|.| ||...+ |.+.+|.| .||+.++..... .. .....++|.+
T Consensus 304 t~~~~~~~pP~-l~~~~~-~~si~v~W~~P~~~~~~~~~~~~~~~Y~v-----~y~~~~~~~~~~--~~-~~~~~~~l~~ 373 (414)
T 3se4_A 304 TEIQAFLLPPV-FNIRSL-SDSFHIYIGAPKQSGNTPVIQDYPLIYEI-----IFWENTSNAERK--II-EKKTDVTVPN 373 (414)
T ss_dssp TTCC----------------------------------------------------------------------------
T ss_pred chhccccCCCe-EEEEEC-CCeEEEEEECCCCccccchhhcCCeEEEE-----EEEECCCCceEE--EE-ecCCeEEeCC
Confidence 88888888998 888865 24455555 555544 58899999 888876543322 22 3456789999
Q ss_pred CCCCCCceeec
Q psy8139 976 PDDEPDYVIKG 986 (1101)
Q Consensus 976 ~~~~~~~~~~~ 986 (1101)
|++++.|.|+.
T Consensus 374 L~p~t~Y~~~V 384 (414)
T 3se4_A 374 LKPLTVYCVKA 384 (414)
T ss_dssp -----------
T ss_pred CCCCCeEEEEE
Confidence 99999999998
No 118
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.73 E-value=2.5e-16 Score=175.04 Aligned_cols=255 Identities=12% Similarity=0.136 Sum_probs=183.0
Q ss_pred eeEEccCCeEEEEEEEe-ccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEE
Q psy8139 461 DTTALEDEKVEFTVQVE-GIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKAR 539 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~-g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~ 539 (1101)
.+.+.+|+.+.|.|... +.|.+.+.|++++..+....++.+...++...|.|.++...|+|.|+|.|.|..|... +..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence 45688999999998775 6788999999999999888888888878778999999999999999999999988554 566
Q ss_pred Eeecc------------CCccccCCCCCCCeEEeeCCEEEEEEEEe-ecCCCeeEEEECCeecCCCCceEEEee--cceE
Q psy8139 540 LRLEA------------PPTIRLPKQYEDGLLFEMGEIIKLKVSMA-GMPPPTARWLHNGEPLTSGGRYEITHT--DRYL 604 (1101)
Q Consensus 540 l~V~~------------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~-g~p~~~v~W~~~g~~l~~~~~~~~~~~--~~~~ 604 (1101)
+.|.. +|.+...+. ....+..|+.+.|.|.+. +.|.+.+.|++++..+..+.++.+... ....
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~--~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~ 166 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSE--LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGII 166 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEE--EEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEE
T ss_pred EEEeeeeeeecccccCCCCccccccC--CceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEE
Confidence 66653 444432211 145778899999999999 889999999999999987776666543 4456
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC------------------CCCCC---ccEEEEecCCeEEEEee
Q psy8139 605 NLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDR------------------PLPPG---KAKVVMTLGKSVTLSWS 663 (1101)
Q Consensus 605 sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~------------------P~~P~---~~~~~~~~~~sv~lsW~ 663 (1101)
+|.|.++...|.|.|+|.|.|..+.. ...+.+... ..+|. .+......+..+.|.|.
T Consensus 167 ~L~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~ 244 (312)
T 2y23_A 167 EMFMEKLQDEDEGTYTFQLQDGKATN--HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCK 244 (312)
T ss_dssp EEEESCCCGGGCEEEEEEEESSSCEE--EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEE
T ss_pred EEEEccCCcccCEeEEEEEEeCCceE--EEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEE
Confidence 79999999999999999998654433 333333100 11121 22245567889999998
Q ss_pred cCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccC
Q psy8139 664 EPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVE 743 (1101)
Q Consensus 664 ~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~ 743 (1101)
....+ ....+.|... |.++. . .+ ... .. ..
T Consensus 245 ~~~~p---------------------------------~~~~v~W~~~----g~~~~-----~--~~--~~~-~~---~~ 274 (312)
T 2y23_A 245 VANIK---------------------------------KETHIVWYKD----EREIS-----V--DE--KHD-FK---DG 274 (312)
T ss_dssp EESCC---------------------------------SSCEEEEEET----TEEEE-----E--EC--CC--------C
T ss_pred EcCCC---------------------------------CCCEEEEeeC----CEECC-----C--CC--cEE-EE---CC
Confidence 63211 1124677642 11111 0 00 000 00 23
Q ss_pred ccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 744 DTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 744 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
...++|.++.+.....|.|.|.|..|.
T Consensus 275 ~~~L~I~~v~~~d~G~Y~C~a~N~~G~ 301 (312)
T 2y23_A 275 ICTLLITEFSKKDAGIYEVILKDDRGK 301 (312)
T ss_dssp EEEEEECSCSGGGCEEEEEEEESTTCC
T ss_pred EEEEEECcCCHHHCEEEEEEEEcCCCc
Confidence 468899999999999999999999996
No 119
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.72 E-value=4.2e-16 Score=174.09 Aligned_cols=259 Identities=12% Similarity=0.033 Sum_probs=168.2
Q ss_pred EEeeCCEEEEEEEEeecC-CCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEE
Q psy8139 559 LFEMGEIIKLKVSMAGMP-PPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVT 637 (1101)
Q Consensus 559 ~v~~g~~~~l~c~~~g~p-~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~ 637 (1101)
.+..|.+++|.|.+.+.+ .+.|.|.+++..+..... ... ...+.|.|.++...|.|.|+|. ..|.....+.|.
T Consensus 17 ~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~-~~~--~~~~~L~i~~v~~~d~G~Y~C~---~~g~~~~~~~L~ 90 (325)
T 1n26_A 17 TSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPS-RWA--GMGRRLLLRSVQLHDSGNYSCY---RAGRPAGTVHLL 90 (325)
T ss_dssp EECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCE-EEE--EESSEEEECSCCGGGCEEEEEE---SSSSCSCEEEEE
T ss_pred ECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcccc-ccc--cccceEEecccchhhCeEeEEE---eCCEEeeeEEEE
Confidence 345899999999988765 789999998776532211 111 2246899999999999999999 367777889999
Q ss_pred EecCCCCCCccEEEE-ecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCC
Q psy8139 638 VTDRPLPPGKAKVVM-TLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGG 716 (1101)
Q Consensus 638 v~~~P~~P~~~~~~~-~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~ 716 (1101)
|..+|..|. +.... ....++.++|.++.+ ++
T Consensus 91 V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~-~~---------------------------------------------- 122 (325)
T 1n26_A 91 VDVPPEEPQ-LSCFRKSPLSNVVCEWGPRST-PS---------------------------------------------- 122 (325)
T ss_dssp ECCCCCCCC-CEEEBSSTTSCEEEEECCSSC-CC----------------------------------------------
T ss_pred eccCCCCCc-eeEEeecCCCcEEEEECCCCC-CC----------------------------------------------
Confidence 999998886 65542 235577777775432 11
Q ss_pred CCcceEEEEEEeCC-C--CCc-eeecc-cccCccEEEEcCCC-CCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCC
Q psy8139 717 SPVLGYLVEHRRTG-S--PYW-VRASP-HMVEDTELMVSGLE-PGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAA 790 (1101)
Q Consensus 717 ~~i~~Y~V~~~~~~-~--~~~-~~~~~-~~~~~~~~~i~~L~-p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~ 790 (1101)
...+|.|.|+... . ..| ..+.. ......+++|..+. +++.|.|+|.|.|..|.+. +.. .........++.
T Consensus 123 -~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~-s~~--~~~~~~~~v~P~ 198 (325)
T 1n26_A 123 -LTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKF-SKT--QTFQGCGILQPD 198 (325)
T ss_dssp -TTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEE-CCC--EEEETTTCBCCC
T ss_pred -CCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCcc-cCc--EEEeeccccCCC
Confidence 2355666665431 1 122 22211 11345678888876 8899999999999999864 211 122222345677
Q ss_pred CCcccc--ccc--ccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeeccc
Q psy8139 791 APSFIR--ALH--DTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVETNE 866 (1101)
Q Consensus 791 ~p~~~~--~~~--~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~ 866 (1101)
||.++. ... ++++.+.|.||...+ .+++++ .|.|.|+..+ ...|....+..
T Consensus 199 pP~~l~v~~~~~~~~sv~lsW~~p~~~~----------~~~~~~------------~Y~V~yr~~~-~~~W~~~~~~~-- 253 (325)
T 1n26_A 199 PPANITVTAVARNPRWLSVTWQDPHSWN----------SSFYRL------------RFELRYRAER-SKTFTTWMVKD-- 253 (325)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCC----------CSSSCE------------EEEEEEEETT-CSCCEEEECGG--
T ss_pred CCcceEEEEecCCCCEEEEEECCCCccC----------CCcEeE------------EEEEEEEeCC-CCCCEEEcccC--
Confidence 887765 222 247888998864421 234456 8999998875 45687654422
Q ss_pred cccCCCCCCCCCccCcccce--eeccccccc------Cceeeccc
Q psy8139 867 HTGTGAPSDNENESDYFPEK--TIDESVYGY------DTIVYGYD 903 (1101)
Q Consensus 867 ~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~------~~~v~~~t 903 (1101)
......+.+|.+++.|+ |+|.|..|. +..+.+.+
T Consensus 254 ---~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 254 ---LQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp ---GCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred ---CceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 11222344455999999 999998774 45555544
No 120
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.72 E-value=5.9e-17 Score=187.47 Aligned_cols=209 Identities=12% Similarity=-0.005 Sum_probs=86.1
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeC--CCCceeEEEEEEec----CCCCCCccEEEEecCCeEEEEeecCCCCCCccccee
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNS--LGEDVASFLVTVTD----RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNY 676 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~--~G~~~~s~~l~v~~----~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y 676 (1101)
...+.|.+|.++..|.+++.|.|. .|.+..+....+.. ++.+|.++.+.... .++.|+|++|.
T Consensus 162 ~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~pp~---------- 230 (414)
T 3se4_A 162 YSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDYTY---------- 230 (414)
T ss_dssp CSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEECSS----------
T ss_pred CcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEec-CCeEEEECCCC----------
Confidence 456889999999999999999994 56555443333332 23556666665443 45667777542
Q ss_pred EEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeC--------CCCCceeecc-cccCccEE
Q psy8139 677 IVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRT--------GSPYWVRASP-HMVEDTEL 747 (1101)
Q Consensus 677 ~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~--------~~~~~~~~~~-~~~~~~~~ 747 (1101)
...+|.|+|+.. +...|..+.. .....+.+
T Consensus 231 -----------------------------------------~~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 269 (414)
T 3se4_A 231 -----------------------------------------ANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQC 269 (414)
T ss_dssp -----------------------------------------SSCEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEE
T ss_pred -----------------------------------------CCeEEEEEEEehhccccccccccCceECCCccCCCCCEE
Confidence 124788888763 2456765421 12445677
Q ss_pred EEc-CCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccccccccceeccccCCCCCCccccceeeeecC
Q psy8139 748 MVS-GLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKPRNTNNCDYESKRTFQST 826 (1101)
Q Consensus 748 ~i~-~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~ 826 (1101)
.++ +|.+++.|.|+|.|.|..|.|++|....+. +.++.+++||.+......+++.+.|.||...++... .+
T Consensus 270 ~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~--t~~~~~~~pP~l~~~~~~~si~v~W~~P~~~~~~~~------~~ 341 (414)
T 3se4_A 270 VFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFD--TEIQAFLLPPVFNIRSLSDSFHIYIGAPKQSGNTPV------IQ 341 (414)
T ss_dssp EEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEE--TTCC----------------------------------------
T ss_pred cCCcccccCccEEEEEEEecCCCccccccccccc--chhccccCCCeEEEEECCCeEEEEEECCCCccccch------hh
Confidence 776 699999999999999999998887554333 334667888884334345677888988655332110 01
Q ss_pred cchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeeccccccCCCCCCCCCccCcccce--eeccc
Q psy8139 827 SPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVETNEHTGTGAPSDNENESDYFPEK--TIDES 891 (1101)
Q Consensus 827 ~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n 891 (1101)
+.++ .|.|.|...+....+.. . .......+.+|++.+.|. |+|.+
T Consensus 342 ~~~~------------~Y~v~y~~~~~~~~~~~-~-------~~~~~~~l~~L~p~t~Y~~~V~A~~ 388 (414)
T 3se4_A 342 DYPL------------IYEIIFWENTSNAERKI-I-------EKKTDVTVPNLKPLTVYCVKARAHT 388 (414)
T ss_dssp -------------------------------------------------------------------
T ss_pred cCCe------------EEEEEEEECCCCceEEE-E-------ecCCeEEeCCCCCCCeEEEEEEEEe
Confidence 2233 78887766553333221 1 122234455666999999 88887
No 121
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.72 E-value=5.7e-17 Score=175.64 Aligned_cols=200 Identities=18% Similarity=0.175 Sum_probs=146.9
Q ss_pred ceEEEcCc---cCCccE--EEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccC
Q psy8139 406 TELMVSGL---EPGWRY--QFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIP 480 (1101)
Q Consensus 406 ~~l~i~~L---~p~d~y--~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p 480 (1101)
..+.+..+ +..|.| .|+|.|.|..|... ..+.+.+... .+|.+. +.+..+.+|+.++|.|.+. |
T Consensus 56 ~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~-----~~~~l~V~~~--p~p~~~--~~~~~v~~G~~v~l~C~~~--p 124 (265)
T 2oz4_A 56 DSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE-----TLQTVTIYSF--PAPNVI--LTKPEVSEGTEVTVKCEAH--P 124 (265)
T ss_dssp SEEEEEEEEEECGGGCEEEEEEEEEEETTEEEE-----EEEEEEEECC--CCCEEE--ESCSEEETTCEEEEEEECC--T
T ss_pred CeEEEEeecccccccCCcceEEEEEecCCCCcE-----EEEEEEEeCC--CCceee--cCCceecCCCcEEEEEEcc--C
Confidence 35555555 667766 59999999887642 2344554322 124444 4466788899999999998 8
Q ss_pred CCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCC-CceE---EEEEEeeccCCccccCCCCCC
Q psy8139 481 TPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRA-GHSI---TKARLRLEAPPTIRLPKQYED 556 (1101)
Q Consensus 481 ~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~-g~~~---~s~~l~V~~~p~~~~~~~~~~ 556 (1101)
.+.++| +|..+.. .+..+.|.|..+...|.|.|+|.|.|.. |... ....|.|..+|.+.... .+.
T Consensus 125 ~~~i~W--~g~~~~~--------~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~-~p~ 193 (265)
T 2oz4_A 125 RAKVTL--NGVPAQP--------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERD-CPG 193 (265)
T ss_dssp TSEEEE--SSCSSSC--------CSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGG-SCS
T ss_pred CCEEEE--CCEEccC--------CCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCcccccc-CCC
Confidence 899999 7766532 2234578899999999999999998644 6655 56778888887764332 223
Q ss_pred CeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 557 GLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 557 ~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
...+..|+.+.|.|.+.|.|.|.+.|++++..+...+ .+ ..+...|.|.|+|.|.|..|.......|
T Consensus 194 ~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g-----------~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 260 (265)
T 2oz4_A 194 NWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG-----------ES--VTVTRDLEGTYLCRARSTQGEVTREVTV 260 (265)
T ss_dssp EEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTT-----------SC--EECCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCCC-----------cE--EEeehhhCeEEEEEEECCCCcEEEEEEE
Confidence 5578889999999999999999999999987322211 11 1377789999999999999998888888
Q ss_pred EEec
Q psy8139 637 TVTD 640 (1101)
Q Consensus 637 ~v~~ 640 (1101)
.|..
T Consensus 261 ~V~~ 264 (265)
T 2oz4_A 261 NVLS 264 (265)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8864
No 122
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.71 E-value=7.6e-17 Score=166.70 Aligned_cols=172 Identities=17% Similarity=0.210 Sum_probs=134.0
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCe-EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK-VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~-v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..|.+...|.+..+.+|++++|.|.+.+.|.+. +.|+++|..+.... ..|.|.++...|+|.|+|.+.|
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCC
Confidence 557777788888899999999999999988876 99999998875432 4899999999999999999987
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCCeeEEEECCeecCCCCceEEEeecceEEEEE
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPPTARWLHNGEPLTSGGRYEITHTDRYLNLRI 608 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i 608 (1101)
. ..+....|.|..+|.+...+. ..+..|+.+.|.|.+.+. |.+.+.|+++|..+.. ......|.|
T Consensus 76 ~--~~s~~~~l~V~~~p~~~~~~~----~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~--------~~~~~~L~i 141 (204)
T 3sgj_C 76 S--TLSDPVQLEVHIGWLLLQAPR----WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY--------FHHNSDFYI 141 (204)
T ss_dssp S--BCCCCEEEEEECSSEEEECSC----SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE--------EEECCCEEE
T ss_pred C--cccccEEEEEecCceEecCCc----eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec--------ccCCceEEE
Confidence 4 444567788887776554433 367889999999999765 5689999999987532 122567999
Q ss_pred ccCCCCCCeEEEEEEEeC-CCCceeEEEEEEecCCCCCC
Q psy8139 609 SDARRADRGEYQAHGVNS-LGEDVASFLVTVTDRPLPPG 646 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~-~G~~~~s~~l~v~~~P~~P~ 646 (1101)
.++...|.|.|+|.|.|. .+..+....|.|..+|.+|.
T Consensus 142 ~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~ 180 (204)
T 3sgj_C 142 PKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVST 180 (204)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred CcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCCc
Confidence 999999999999999994 44556678888988776663
No 123
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.71 E-value=1.1e-16 Score=166.70 Aligned_cols=181 Identities=21% Similarity=0.314 Sum_probs=138.9
Q ss_pred CeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEe------------ecCCcEEEEecCCeeEEEEeecCCCCC
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEI------------FSSRRQRIVTDNDISTLIIHQAALMDE 520 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~------------~~~~~~~~~~~~~~~~l~I~~l~~~d~ 520 (1101)
+.+...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.+.. ..|.|.++...|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccC
Confidence 34556677888999999999999999999999999976442 1123333332 4899999999999
Q ss_pred EEEEEEEEeCCC--ceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEE-EeecCCCeeEEEECCe-ecCCCCc--
Q psy8139 521 GEIKCTATNRAG--HSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVS-MAGMPPPTARWLHNGE-PLTSGGR-- 594 (1101)
Q Consensus 521 g~Y~C~a~n~~g--~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~-~~g~p~~~v~W~~~g~-~l~~~~~-- 594 (1101)
|.|+|.+.|..| .......|.|..+|.+...+. ...+..|+.+.|.|. +.+.|.+.+.|++++. .+.....
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~ 154 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISV---PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKT 154 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEEC---CSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----C
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCC---ccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccccc
Confidence 999999999877 445567888888876654332 236788999999999 7899999999999998 7764322
Q ss_pred -----eEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc--eeEEEEEEec
Q psy8139 595 -----YEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED--VASFLVTVTD 640 (1101)
Q Consensus 595 -----~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~--~~s~~l~v~~ 640 (1101)
...........|.|.++...|.|.|+|.|.|..|.. +....|.|.+
T Consensus 155 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 155 RAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp BSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred ccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 112233446789999999999999999999999987 4566666664
No 124
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.71 E-value=6.3e-17 Score=190.53 Aligned_cols=213 Identities=15% Similarity=0.208 Sum_probs=128.9
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEecc-----------C--CCCCCee-eecCceeE-EccCCeE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR-----------S--PAAAPSF-IRALHDTT-ALEDEKV 470 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~-----------~--~~~~P~~-~~~p~~~~-v~~g~~v 470 (1101)
..|.|.++...| |.|+|.|.|..+.... ..++.+.. . ...+|.+ ...|.... +..|+++
T Consensus 194 s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v 267 (457)
T 1hzh_H 194 SVVTVPSSSLGT-QTYICNVNHKPSNTKV-----DKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTP 267 (457)
T ss_dssp EEEEECSGGGGT-SCCEEEEEEGGGTEEE-----EEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCC
T ss_pred EEEEecccccCC-ceEEEEEEeCCCCcce-----eEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCce
Confidence 468999999988 9999999997664211 11111110 0 1124554 33343332 5679999
Q ss_pred EEEEEEeccCCC----eEEEEECCEEeecCCcEE-EEecCCeeEEEEee---cCCCC---CEEEEEEEEeCCCceEEEEE
Q psy8139 471 EFTVQVEGIPTP----KVSWYKDGFEIFSSRRQR-IVTDNDISTLIIHQ---AALMD---EGEIKCTATNRAGHSITKAR 539 (1101)
Q Consensus 471 ~L~C~~~g~p~~----~v~W~~~g~~~~~~~~~~-~~~~~~~~~l~I~~---l~~~d---~g~Y~C~a~n~~g~~~~s~~ 539 (1101)
+|.|.+.|.|++ .|+|++++..+....... ....++ .+.+.+ +...| +|.|+|.|.|..+.......
T Consensus 268 ~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g--~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~ 345 (457)
T 1hzh_H 268 EVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNS--TYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKT 345 (457)
T ss_dssp CEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTS--CEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEE
T ss_pred EEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCC--cEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEE
Confidence 999999997653 899999998875432111 112222 344432 23445 99999999987665544434
Q ss_pred Ee----eccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCC--CeeEEEECCeecCCCCceEEEeecc-----eEEEEE
Q psy8139 540 LR----LEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPP--PTARWLHNGEPLTSGGRYEITHTDR-----YLNLRI 608 (1101)
Q Consensus 540 l~----V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~--~~v~W~~~g~~l~~~~~~~~~~~~~-----~~sl~i 608 (1101)
+. +..+|.+...+.... .+. +..+.|.|.+.|.++ +.+.|+++|..+............+ ...+.+
T Consensus 346 v~~~~~~~~~P~v~~~~~~~~--~~~-~~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i 422 (457)
T 1hzh_H 346 ISKAKGQPREPQVYTLPPSRD--ELT-KNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTV 422 (457)
T ss_dssp ECCCCCCCBCCEEEEECCCGG--GGG-SSEEEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEE
T ss_pred EEcccCCCCCCeEEEECCCcc--ccC-CCcEEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEE
Confidence 43 345565543222111 122 444999999999644 4999999999886432111111111 234555
Q ss_pred ccCCCCCCeEEEEEEEeCCCC
Q psy8139 609 SDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
......+.|.|+|.|.|....
T Consensus 423 ~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 423 DKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp EHHHHHTTCCEEEEEECTTSG
T ss_pred ChHHccCCCeEEEEEEECCCC
Confidence 555556789999999997644
No 125
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.71 E-value=7.9e-17 Score=188.94 Aligned_cols=254 Identities=13% Similarity=0.125 Sum_probs=160.2
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc-CCC-
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PTP- 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~- 482 (1101)
..+|.|.++++.|+|.|+|.|.|..+... ..+....+.+......+|.+...+....+..|+.++|.|.+.|. |.+
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~--~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~ 155 (444)
T 1igt_B 78 TLYLQMSRLKSEDTAMYYCARHGGYYAMD--YWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPV 155 (444)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSCEE--EEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCC
T ss_pred eEEEEECCCCHHHCEEEEEEEecCCcccc--cccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCc
Confidence 35799999999999999999999754310 01122455555333445655433333335789999999999885 776
Q ss_pred eEEEEECCEEeecCCcEEEEecC---CeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec----------------
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDN---DISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE---------------- 543 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~---~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~---------------- 543 (1101)
.++|++++..+...........+ ..+.|.|.++...| |.|+|.|.|..|.......+.+.
T Consensus 156 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (444)
T 1igt_B 156 TLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPN 234 (444)
T ss_dssp EEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSC
T ss_pred EEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcc
Confidence 99999987653110000000011 12368999999889 99999999999886555554331
Q ss_pred --cCCcc-ccCCCCCCCeEEeeCCEEEEEEEEeecC----CCeeEEEECCeecCCCCce--EEEee---cceEEEEEccC
Q psy8139 544 --APPTI-RLPKQYEDGLLFEMGEIIKLKVSMAGMP----PPTARWLHNGEPLTSGGRY--EITHT---DRYLNLRISDA 611 (1101)
Q Consensus 544 --~~p~~-~~~~~~~~~~~v~~g~~~~l~c~~~g~p----~~~v~W~~~g~~l~~~~~~--~~~~~---~~~~sl~i~~l 611 (1101)
.+|.+ ..+|... ..+..|+.+.|.|.+.|.+ .+.+.|+++|..+...... ..... ...+.|.|.++
T Consensus 235 ~~~~p~v~~~~p~~~--~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 312 (444)
T 1igt_B 235 LLGGPSVFIFPPKIK--DVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQ 312 (444)
T ss_dssp CCCCCEEEEECCCHH--HHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHH
T ss_pred cCCCceEEecCCchh--heeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHH
Confidence 13332 2222110 0136699999999999984 4699999999887543211 11111 12467999999
Q ss_pred CCCCCeEEEEEEEeCCCCceeEEEEEE-ecCCCCCCccEEEE-----ecCCeEEEEeec
Q psy8139 612 RRADRGEYQAHGVNSLGEDVASFLVTV-TDRPLPPGKAKVVM-----TLGKSVTLSWSE 664 (1101)
Q Consensus 612 ~~~~~y~y~c~A~N~~G~~~~s~~l~v-~~~P~~P~~~~~~~-----~~~~sv~lsW~~ 664 (1101)
...|.|.|+|.|.|..|.......+.. ...+.+|. +.+.. +....++|.|..
T Consensus 313 ~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~-v~~~~~~~~~~~~~~~~L~C~~ 370 (444)
T 1igt_B 313 DWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQ-VYVLPPPEEEMTKKQVTLTCMV 370 (444)
T ss_dssp HHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCE-EEEECCCGGGTTSSEEEEEEEE
T ss_pred HhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCE-EEEeCCChHHccCCeEEEEEEE
Confidence 999999999999999887644443322 12233331 11111 123458888875
No 126
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.71 E-value=1.7e-16 Score=166.13 Aligned_cols=186 Identities=26% Similarity=0.447 Sum_probs=142.7
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCC--cEEEEecCCee--EEEEeecCCCCCEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSR--RQRIVTDNDIS--TLIIHQAALMDEGEIKC 525 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~--~~~~~~~~~~~--~l~I~~l~~~d~g~Y~C 525 (1101)
..+|.|...|.++.+.+|+++.|.|.+.+.|.+.+.|+++|..+.... ...+...++.. .+.|.++...|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 478899999999999999999999999999999999999999886542 22233333321 23688999999999999
Q ss_pred EEEeCCCceEE-EEEEeecc-CCccccCCCCCCCeEEeeCCEEEEEEEE-eecCCCeeEEEECCeecCCC--------Cc
Q psy8139 526 TATNRAGHSIT-KARLRLEA-PPTIRLPKQYEDGLLFEMGEIIKLKVSM-AGMPPPTARWLHNGEPLTSG--------GR 594 (1101)
Q Consensus 526 ~a~n~~g~~~~-s~~l~V~~-~p~~~~~~~~~~~~~v~~g~~~~l~c~~-~g~p~~~v~W~~~g~~l~~~--------~~ 594 (1101)
.+.|..|.... ...|.|.. +|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|+++|..+... .+
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~---~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 163 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLRDDFRVEP---KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSR 163 (217)
T ss_dssp EEEETTEEEECCCEEEEECEECCSCSBCC---CCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCS
T ss_pred EEecCCCccccccceEEEEEeCCCcEECC---CccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCc
Confidence 99999887643 45666655 44443333 24578889999999999 89999999999999988732 22
Q ss_pred eEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC
Q psy8139 595 YEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDR 641 (1101)
Q Consensus 595 ~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~ 641 (1101)
+... ..++|.|.++...|.|.|+|.|.|..|....+..+.+...
T Consensus 164 ~~~~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 164 VRIV---DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp EEEE---TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred EEec---CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 2222 2457999999999999999999999998777655555543
No 127
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.70 E-value=1.5e-16 Score=165.76 Aligned_cols=190 Identities=24% Similarity=0.414 Sum_probs=141.4
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCC-----cEEEEecCCee--EEEEeecCCCCCEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSR-----RQRIVTDNDIS--TLIIHQAALMDEGE 522 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~-----~~~~~~~~~~~--~l~I~~l~~~d~g~ 522 (1101)
..+|.|...|.++.+.+|++++|.|.+.+.|.+.+.|++++..+.... .......+... .+.|.++...|+|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 357888888999999999999999999999999999999998876432 12222222211 23445678999999
Q ss_pred EEEEEEeCCCce-EEEEEEeeccC-CccccCCCCCCCeEEeeCCEEEEEEEE-eecCCCeeEEEECCeecCCCCceEEEe
Q psy8139 523 IKCTATNRAGHS-ITKARLRLEAP-PTIRLPKQYEDGLLFEMGEIIKLKVSM-AGMPPPTARWLHNGEPLTSGGRYEITH 599 (1101)
Q Consensus 523 Y~C~a~n~~g~~-~~s~~l~V~~~-p~~~~~~~~~~~~~v~~g~~~~l~c~~-~g~p~~~v~W~~~g~~l~~~~~~~~~~ 599 (1101)
|+|.+.|..|.. .....|.|... +.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+..........
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~ 163 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAILRDDFRQNP---SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR 163 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECSSCSBCC---CCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE
T ss_pred EEEEEECCCCceeecceEEEEEeccccceeCC---CceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc
Confidence 999999998865 33566777653 3332222 34578899999999998 899999999999999887543322222
Q ss_pred ecceEEEEEccCCCCCCeEEEEEEEeCCCCcee-EEEEEEecCCCCC
Q psy8139 600 TDRYLNLRISDARRADRGEYQAHGVNSLGEDVA-SFLVTVTDRPLPP 645 (1101)
Q Consensus 600 ~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~-s~~l~v~~~P~~P 645 (1101)
.+.|.|.++...|.|.|+|.|.|..|.... ...|.|..+|..+
T Consensus 164 ---~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~ 207 (212)
T 2v9r_A 164 ---GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFV 207 (212)
T ss_dssp ---TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred ---CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHh
Confidence 458999999999999999999999998654 4788888777543
No 128
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.70 E-value=3.8e-17 Score=184.18 Aligned_cols=187 Identities=16% Similarity=0.146 Sum_probs=146.0
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEe-------ccCCCeEEEEECCEEe--ecCCcEEEEecCCeeEEEEeecCCCCCE
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVE-------GIPTPKVSWYKDGFEI--FSSRRQRIVTDNDISTLIIHQAALMDEG 521 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~-------g~p~~~v~W~~~g~~~--~~~~~~~~~~~~~~~~l~I~~l~~~d~g 521 (1101)
..|.+...|.+..+.+|+++.|.|.+. +.|.+.+.|++++..+ .......+...++ .|.|.++...|+|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G 94 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDSG 94 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCCE
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccCE
Confidence 567888889999999999999999998 8999999999998763 3321223333333 8999999999999
Q ss_pred EEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEE-----EeecCCCeeEEEECCeecCCC-Cce
Q psy8139 522 EIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVS-----MAGMPPPTARWLHNGEPLTSG-GRY 595 (1101)
Q Consensus 522 ~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~-----~~g~p~~~v~W~~~g~~l~~~-~~~ 595 (1101)
.|+|.+.|..|.......|.|..++....+. ......+..|..+.|.|. +.+.|.+.+.|+++|..+... .++
T Consensus 95 ~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~ 173 (339)
T 3o4o_C 95 TYVCTTRNASYCDKMSIELRVFENTDAFLPF-ISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKF 173 (339)
T ss_dssp EEECCEEETTEEEEEEEEEEEECSCGGGHHH-HCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSE
T ss_pred EEEEEEECCcceEEEEEEEEEEcCCCccccc-cccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCcee
Confidence 9999999999988888889998776543111 111236788999999999 788999999999999988754 334
Q ss_pred EEEeecceEEEEEccCCCCCCeEEEEEEEeCCCC----ceeEEEEEEecCC
Q psy8139 596 EITHTDRYLNLRISDARRADRGEYQAHGVNSLGE----DVASFLVTVTDRP 642 (1101)
Q Consensus 596 ~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~----~~~s~~l~v~~~P 642 (1101)
.+. .+...|.|.++...|.|.|+|.|.|..|. ......|.|...+
T Consensus 174 ~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~ 222 (339)
T 3o4o_C 174 LSV--RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKK 222 (339)
T ss_dssp EEC--TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCC
T ss_pred EEc--CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCC
Confidence 332 23458999999999999999999999884 3456677777543
No 129
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.70 E-value=3.9e-16 Score=173.94 Aligned_cols=275 Identities=13% Similarity=0.046 Sum_probs=170.1
Q ss_pred ccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEE
Q psy8139 446 QRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKC 525 (1101)
Q Consensus 446 ~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C 525 (1101)
+.....+|.|...|. ..+.+|++++|.|.+.+. .+.+.|+++|..+..... .......|.|.++...|+|.|+|
T Consensus 18 ~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C 91 (316)
T 3vh8_G 18 HMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH----GRIFQESFNMSPVTTAHAGNYTC 91 (316)
T ss_dssp ------CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH----HCCBSSCEEECSCCGGGCEEEEE
T ss_pred ccCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeec----CCcceEEEEECCCCcccCeEEEE
Confidence 334457888888887 568899999999999987 678999999876432100 01223479999999999999999
Q ss_pred EEEeCCC-----ceEEEEEEeeccC---CccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCce-E
Q psy8139 526 TATNRAG-----HSITKARLRLEAP---PTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRY-E 596 (1101)
Q Consensus 526 ~a~n~~g-----~~~~s~~l~V~~~---p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~-~ 596 (1101)
.|.|..+ ..+....|.|... |.+...+. ..+..|+.++|.|.+. .+.+.+.|+++|..+...... .
T Consensus 92 ~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~----~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~ 166 (316)
T 3vh8_G 92 RGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPG----PLVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQ 166 (316)
T ss_dssp EEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESC----SEEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECE
T ss_pred EEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCC----CccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeee
Confidence 9986432 2233456666542 33332221 2478899999999994 566799999998877532211 1
Q ss_pred EEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc-----eeEEEEEEecCCCCCCccEE----EEecCCeEEEEeecCCC
Q psy8139 597 ITHTDRYLNLRISDARRADRGEYQAHGVNSLGED-----VASFLVTVTDRPLPPGKAKV----VMTLGKSVTLSWSEPED 667 (1101)
Q Consensus 597 ~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~-----~~s~~l~v~~~P~~P~~~~~----~~~~~~sv~lsW~~p~~ 667 (1101)
.........|.|.++...|.|.|+|.|.|..|.. +....+.|...+.+|. +.. ....+.+++|.|....
T Consensus 167 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~-i~~~~~~~v~~G~~v~L~C~~~~- 244 (316)
T 3vh8_G 167 IHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPS-LSAQPGPKVQAGESVTLSCSSRS- 244 (316)
T ss_dssp EETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCE-EEEESCSCCCTTSCCEEEEEESS-
T ss_pred ecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCe-EEeCCCCeecCCCcEEEEEECCC-
Confidence 1222346789999999999999999999998852 4456777776555542 111 1234677888887531
Q ss_pred CCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEE
Q psy8139 668 DGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTEL 747 (1101)
Q Consensus 668 ~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~ 747 (1101)
....+.|.... ..+..-.... ..........+
T Consensus 245 ----------------------------------~~~~~~W~k~g----~~~~~~~~~~----------~~~~~~~~~~L 276 (316)
T 3vh8_G 245 ----------------------------------SYDMYHLSREG----GAHERRLPAV----------RKVNRTFQADF 276 (316)
T ss_dssp ----------------------------------CCSEEEEEETT----SSCCEEEECE----------ECTTSCEEEEE
T ss_pred ----------------------------------CCcEEEEEECC----CcCCCceece----------eccCCceeEEE
Confidence 01245665421 1111100000 00000223577
Q ss_pred EEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 748 MVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 748 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
+|.++. +...|+|.|.|..|...+|..+..+.+.
T Consensus 277 ~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 310 (316)
T 3vh8_G 277 PLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVS 310 (316)
T ss_dssp ECC-------CEEEEEEEBTTBTTEECCCCCCEEC-
T ss_pred EcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEE
Confidence 888888 7899999999988764445555555543
No 130
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.70 E-value=2.1e-17 Score=209.20 Aligned_cols=287 Identities=12% Similarity=0.049 Sum_probs=174.4
Q ss_pred CCCCceEEEEeeCCCCCCCCCcceEEEEEEeC--------------CCCCceeeccccc---------CccEEEEcCCCC
Q psy8139 698 SLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRT--------------GSPYWVRASPHMV---------EDTELMVSGLEP 754 (1101)
Q Consensus 698 ~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~--------------~~~~~~~~~~~~~---------~~~~~~i~~L~p 754 (1101)
.++++++.|+|++|..+++++|.+|.|+|+.. ++..|........ ..++++|.+|.|
T Consensus 479 ~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~L~P 558 (897)
T 2dtg_E 479 RTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKP 558 (897)
T ss_dssp EECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEECSCCS
T ss_pred EEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeCCCCC
Confidence 56889999999999877778899999999875 2356766443211 258899999999
Q ss_pred CceEEEEEEE-EcCCcc----CCCCCCCCcEEecCCCCCCCCCcccc--cccccceeccccCCCCCCccccceeeeecCc
Q psy8139 755 GWRYQFRITA-ENVVGF----SEPGPLSEPLTVTYQRSPAAAPSFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTS 827 (1101)
Q Consensus 755 ~t~Y~~~V~A-~n~~G~----g~~S~~s~~~t~~~~~~P~~~p~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~ 827 (1101)
+|.|.|+|.| .|..|. |++|....+.|. ..+|.+|..+. ..+++++.+.|.||...++.+..|.......
T Consensus 559 ~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~---~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~Y~V~~~~~ 635 (897)
T 2dtg_E 559 WTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD---ATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQ 635 (897)
T ss_dssp SCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC---CCCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEE
T ss_pred CcEEEEEEEEEEeccCCccccCCccceEEEECC---CCCCcCCcceEEEeCCCCEEEEEEeCCCCCCCCeeEEEEEEEEC
Confidence 9999999999 999998 555554433333 34455777665 5566788899999987777766664432110
Q ss_pred ch---h--HHHHhH-hhhceeeEEeeeeccCC----------------------------------CCCCceee------
Q psy8139 828 PM---L--AAFMLL-MLFTFIETISSFRDKYV----------------------------------DNEDDYDI------ 861 (1101)
Q Consensus 828 ~~---~--~~~~v~-~~~~~~~Y~v~~r~~~~----------------------------------~~~~~~~~------ 861 (1101)
.. . ..+.+. .+.+...|.+....... .-.|....
T Consensus 636 ~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~~~~n~v~~ 715 (897)
T 2dtg_E 636 AEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFV 715 (897)
T ss_dssp CCCCSCTTCSSSCSCCCCCC------------------------------------------------------------
T ss_pred CCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEEccCceEEc
Confidence 00 0 000000 00111112111110000 00011000
Q ss_pred ------------eec---------cccccCCCCCCCCCccCcccce--eeccccccc------CceeecccCC-CCccCC
Q psy8139 862 ------------VET---------NEHTGTGAPSDNENESDYFPEK--TIDESVYGY------DTIVYGYDSD-DLDRHY 911 (1101)
Q Consensus 862 ------------v~~---------~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~------~~~v~~~t~e-~~P~~~ 911 (1101)
+.. ...........+.+|.+++.|. |+|.|..|. +..+...|.+ ..|+.+
T Consensus 716 ~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~ 795 (897)
T 2dtg_E 716 PRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDI 795 (897)
T ss_dssp --------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCC
T ss_pred cCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCC
Confidence 000 0001111334455666999999 999999985 3456666665 344578
Q ss_pred CCCChhhhhhhhhhhccc-cccccccchhhcccccchhhhhhccccccccc-cc-ccCCceeEeecCCCCCCCceeec-e
Q psy8139 912 PTLDEEEEEEDRESLVKD-RESSVKGKEEEAKVIKDDEYYENLGDVLTKKY-SL-PVNSDIQIKIDKPDDEPDYVIKG-K 987 (1101)
Q Consensus 912 P~~v~~~~~~~n~t~v~v-p~~~~nG~i~gY~I~~~~~~y~~~~~~~~~~~-~l-~~~~~~~~~i~~~~~~~~~~~~~-~ 987 (1101)
|.++.+...+.++..|.| ||...||.|.||.| .|+..++...... .. .......++|.+|.+| .|.|+. +
T Consensus 796 P~~l~~~~~~~~sv~LsW~~P~~~nG~I~~Y~V-----~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A 869 (897)
T 2dtg_E 796 VGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEV-----SYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRA 869 (897)
T ss_dssp CCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECC-----CCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCE
T ss_pred CcceEEEeCCCCEEEEEECCCCCCCCCEEEEEE-----EEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEEEEEE
Confidence 889998887444455555 78889999999999 8888776222111 11 1234557899999999 599988 5
Q ss_pred eeechh
Q psy8139 988 YEVDNE 993 (1101)
Q Consensus 988 ~~~~~~ 993 (1101)
+...+.
T Consensus 870 ~n~~G~ 875 (897)
T 2dtg_E 870 TSLAGN 875 (897)
T ss_dssp EETTBC
T ss_pred EeCCcc
Confidence 544444
No 131
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.69 E-value=2.6e-16 Score=178.17 Aligned_cols=267 Identities=15% Similarity=0.104 Sum_probs=159.4
Q ss_pred CceeEEccCCeEEEEEEEeccCC-----------CeEEEEECCE------Eee-cCCcEEEEecCCeeEEEEeecCCCCC
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPT-----------PKVSWYKDGF------EIF-SSRRQRIVTDNDISTLIIHQAALMDE 520 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~-----------~~v~W~~~g~------~~~-~~~~~~~~~~~~~~~l~I~~l~~~d~ 520 (1101)
+.++.+.+|+++.|.|.+.+.|. +.+.|++++. .+. ......+...++ .|.|.++...|+
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~ 91 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD--VLWFRPTLLNDT 91 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETT--EEEESSCCGGGC
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCC--EEEEccCChhhC
Confidence 45678999999999999987654 8999999873 221 011122222333 899999999999
Q ss_pred EEEEEEEEeCCCceEEEEEEeeccCCccccCCC-CCCCeEEeeCCEEEEEEEE-----eecCCCeeEEEECCeecCCCCc
Q psy8139 521 GEIKCTATNRAGHSITKARLRLEAPPTIRLPKQ-YEDGLLFEMGEIIKLKVSM-----AGMPPPTARWLHNGEPLTSGGR 594 (1101)
Q Consensus 521 g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~-~~~~~~v~~g~~~~l~c~~-----~g~p~~~v~W~~~g~~l~~~~~ 594 (1101)
|.|+|.|.|..|....++.|.|..+|....+.. .+....+..|+.+.|.|.+ .|.|.+.+.|++++..+.....
T Consensus 92 G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~ 171 (349)
T 4dep_C 92 GNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN 171 (349)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSS
T ss_pred EEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccc
Confidence 999999999999888888899988665433221 1223467789999999985 7789999999999998865433
Q ss_pred eEEEeecceEEEEEccCCCCCCeEEEEEEEeCC-CCc---eeEEEEEEecCCC---CCCcc-----E-EEEecCCeEEEE
Q psy8139 595 YEITHTDRYLNLRISDARRADRGEYQAHGVNSL-GED---VASFLVTVTDRPL---PPGKA-----K-VVMTLGKSVTLS 661 (1101)
Q Consensus 595 ~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~-G~~---~~s~~l~v~~~P~---~P~~~-----~-~~~~~~~sv~ls 661 (1101)
+.. . ...|.|.++...|.|.|+|.|.|.. |.. +....+.|..++. +|.-. . +....+..++|.
T Consensus 172 ~~~--~--~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~ 247 (349)
T 4dep_C 172 VIP--E--GMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIP 247 (349)
T ss_dssp EEE--E--TTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCC
T ss_pred eee--c--CCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEE
Confidence 322 2 3579999999999999999999987 443 4556666765432 22110 1 133345667777
Q ss_pred eecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcce----EEEEEEeCCCCCceee
Q psy8139 662 WSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLG----YLVEHRRTGSPYWVRA 737 (1101)
Q Consensus 662 W~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~----Y~V~~~~~~~~~~~~~ 737 (1101)
|.....+.| .....+.|.... .++.. |.+.-......
T Consensus 248 C~~~~~~~g------------------------------~p~p~v~W~~~g----~~l~~~~~~~~~~~~~~~~~----- 288 (349)
T 4dep_C 248 CTVYFSFLM------------------------------DSRNEVWWTIDG----KKPDDITIDVTINESISHSR----- 288 (349)
T ss_dssp EEEEECCCT------------------------------TCCCEEEEESSC----C--------CCCCEEEECCT-----
T ss_pred EEEEEccCC------------------------------CCCCEEEEEECC----EEccccCCccccccceeeec-----
Confidence 775422111 122467886421 11211 10000000000
Q ss_pred cccccCccEEEEcCCCCCce-EEEEEEEEcCCcc
Q psy8139 738 SPHMVEDTELMVSGLEPGWR-YQFRITAENVVGF 770 (1101)
Q Consensus 738 ~~~~~~~~~~~i~~L~p~t~-Y~~~V~A~n~~G~ 770 (1101)
.........++|.++..... ..|.|.|.|..|.
T Consensus 289 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~ 322 (349)
T 4dep_C 289 TEDETRTQILSIKKVTSEDLKRSYVCHARSAKGE 322 (349)
T ss_dssp TCCEEEEECC-------------CEEEEECSSCE
T ss_pred CCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCc
Confidence 00001123478889999999 9999999999997
No 132
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.69 E-value=3.7e-16 Score=162.46 Aligned_cols=87 Identities=25% Similarity=0.448 Sum_probs=65.5
Q ss_pred CCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccc---cccceEEEcCccCCccEEEE
Q psy8139 346 GPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHM---VEDTELMVSGLEPGWRYQFR 422 (1101)
Q Consensus 346 ~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~---~~~~~l~i~~L~p~d~y~y~ 422 (1101)
.+|++|..+.+. ..+. +++|+|.+|..++|.++.+|.|+++..+...|....... ....+++|.+|.|++.|.|+
T Consensus 7 ~~P~~P~~~~~~-~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 84 (209)
T 2vkw_A 7 DTPSSPSIDQVE-PYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 84 (209)
T ss_dssp CCCCCCEEEEEE-ECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEE
T ss_pred CCCcCCcccEee-eccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEE
Confidence 344444444433 4445 689999999777887899999999988877887653221 23568999999999999999
Q ss_pred EEEEecCCCCCC
Q psy8139 423 ITAENVVGFSEP 434 (1101)
Q Consensus 423 c~A~n~~G~~~~ 434 (1101)
|.|.|..|.+.+
T Consensus 85 V~A~n~~G~~~~ 96 (209)
T 2vkw_A 85 LAALNGKGLGEI 96 (209)
T ss_dssp EEEEETTEECCC
T ss_pred EEEEcCCcccCC
Confidence 999998886643
No 133
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.68 E-value=2.9e-16 Score=184.79 Aligned_cols=228 Identities=10% Similarity=0.134 Sum_probs=142.1
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCC-----CC--CCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFS-----EP--GPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVE 477 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~-----~~--s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~ 477 (1101)
..+|.|.++++.|+|.|+|.|.|..|.. .. ...+....+.+...+..+|.+...+....+..|+.++|.|.+.
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~ 157 (457)
T 1hzh_H 78 TAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVK 157 (457)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEE
T ss_pred EEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEe
Confidence 3579999999999999999999987610 00 0112234555544444567665554445578999999999999
Q ss_pred cc-CC-CeEEEEECCEEeecCCcEEEEecCC----eeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeecc-------
Q psy8139 478 GI-PT-PKVSWYKDGFEIFSSRRQRIVTDND----ISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEA------- 544 (1101)
Q Consensus 478 g~-p~-~~v~W~~~g~~~~~~~~~~~~~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~------- 544 (1101)
|. |. +.|+|++++..+...........++ .+.|.|.++...| |.|+|.|.|..+.......+.+..
T Consensus 158 g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~ 236 (457)
T 1hzh_H 158 DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTC 236 (457)
T ss_dssp SBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSC
T ss_pred EEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCccccc
Confidence 87 64 7999999885432111111111111 2379999999989 999999999887765555444332
Q ss_pred ----------CCcc-ccCCCCCCCeEEeeCCEEEEEEEEeecCCC----eeEEEECCeecCCCCceEEEeecceEEEEEc
Q psy8139 545 ----------PPTI-RLPKQYEDGLLFEMGEIIKLKVSMAGMPPP----TARWLHNGEPLTSGGRYEITHTDRYLNLRIS 609 (1101)
Q Consensus 545 ----------~p~~-~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~----~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~ 609 (1101)
+|.+ ..++... ..+..|+.+.|.|.+.|.+++ .+.|++++..+........... ..+.+.+.
T Consensus 237 ~~~~~~~~~~~p~v~~~~p~~~--~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~-~~g~~~~~ 313 (457)
T 1hzh_H 237 PPCPAPELLGGPSVFLFPPKPK--DTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQ-YNSTYRVV 313 (457)
T ss_dssp CSCCCCCCSSSCEEEEECCCHH--HHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEEC-TTSCEEEE
T ss_pred CCCCCccccCCceEEeECcCch--hhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceec-CCCcEEEE
Confidence 2222 1111100 013459999999999998653 9999999988754322111111 11222222
Q ss_pred ---cCCCCC---CeEEEEEEEeCCCCceeEEEE
Q psy8139 610 ---DARRAD---RGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 610 ---~l~~~~---~y~y~c~A~N~~G~~~~s~~l 636 (1101)
.+...+ .|.|+|.|.|..+.......+
T Consensus 314 ~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v 346 (457)
T 1hzh_H 314 SVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTI 346 (457)
T ss_dssp EEECCCHHHHHHTCCEEEEEECTTSSSCEEEEE
T ss_pred EEEEECHHHccCCCcEEEEEeCCCCCCcceEEE
Confidence 133445 999999999886655444333
No 134
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.68 E-value=8.8e-16 Score=168.69 Aligned_cols=259 Identities=14% Similarity=0.139 Sum_probs=176.1
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.|...+.+..+.+|++++|.|.+.+ .+.|++++..+ . .....+ ..|.|.++...|+|.|+|.|.|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~----~-~~~~~~--~~L~i~~~~~~d~G~Y~C~~~n 78 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN----E-MVENKK--NEWIQEKAEATRTGTYTCSNSN 78 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS----C-EEEECS--SEEEETTCCGGGCEEEEEEESS
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce----e-eecCCC--ceEEEeccCHHhCeEEEEEeeC
Confidence 36788887888999999999999999988 89999988755 1 111222 5899999999999999999999
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCC-CeeEE-EECCeecCCCCceEEEeecceEEEE
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPP-PTARW-LHNGEPLTSGGRYEITHTDRYLNLR 607 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~-~~v~W-~~~g~~l~~~~~~~~~~~~~~~sl~ 607 (1101)
|. ..++.|.|..+|.+... .....+..|+.+.|.|.+.+ |. +.+.| .++|..+..+.++.... ...|.
T Consensus 79 --g~-~~~~~l~V~~~~~~~~~---~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~---~~~L~ 148 (290)
T 2o26_X 79 --GL-TSSIYVFVRDPAKLFLV---GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNP---KAGIT 148 (290)
T ss_dssp --SC-EEEEEEEEECSSCCBCC---CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEET---TTEEE
T ss_pred --Cc-cEEEEEEEeCCCccccc---ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCC---CCCEE
Confidence 54 66788888887765532 23467889999999999996 77 99999 46888887665554443 35799
Q ss_pred EccCCCCCCe-EEEEEEEeCCCCce-eEEEEEEecCC-CCCCc----cEEEEecCCeEEEEeecCCCCCCcccceeEEEE
Q psy8139 608 ISDARRADRG-EYQAHGVNSLGEDV-ASFLVTVTDRP-LPPGK----AKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEY 680 (1101)
Q Consensus 608 i~~l~~~~~y-~y~c~A~N~~G~~~-~s~~l~v~~~P-~~P~~----~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~ 680 (1101)
|.++...|.| .|+|.|.|..|... ....+.|...+ .+|.- .......+..++|.|...+.+
T Consensus 149 i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p------------ 216 (290)
T 2o26_X 149 IKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVS------------ 216 (290)
T ss_dssp EESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESS------------
T ss_pred EecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCC------------
Confidence 9999999999 99999999855532 35677776322 22210 111334567888888853211
Q ss_pred EcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEE
Q psy8139 681 FRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQF 760 (1101)
Q Consensus 681 ~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 760 (1101)
....+.|..... .+. ..+.... ...............++|.++.......|
T Consensus 217 ---------------------~p~~i~W~~~~~----~~~-~~~~~~~---~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y 267 (290)
T 2o26_X 217 ---------------------TSVNSMWLKMNP----QPQ-HIAQVKH---NSWHRGDFNYERQETLTISSARVDDSGVF 267 (290)
T ss_dssp ---------------------TTCEEEEEEESS----SEE-ECCCEEC---CEEEEETTEEEEEEEEEESSCCSSSCEEE
T ss_pred ---------------------cceeEEEecCCC----CCc-cceeecc---cccccCceeeEEEEEEEEcCCCcccCeEE
Confidence 112366764321 110 0000000 00000000012345789999999999999
Q ss_pred EEEEEcCCcc
Q psy8139 761 RITAENVVGF 770 (1101)
Q Consensus 761 ~V~A~n~~G~ 770 (1101)
.|.|.|..|.
T Consensus 268 ~C~a~N~~g~ 277 (290)
T 2o26_X 268 MCYANNTFGS 277 (290)
T ss_dssp EEEEECSSCE
T ss_pred EEEEeCCCCc
Confidence 9999999996
No 135
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.68 E-value=5.6e-16 Score=162.27 Aligned_cols=171 Identities=19% Similarity=0.279 Sum_probs=137.6
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
...+.|...|.++.+..|+++.|.|.+.+.|.+.+.|++++..+... ....|.|.++...|+|.|+|.+.|
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~~~n 86 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG---------NTSELIFNAVHVKDAGFYVCRVNN 86 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC---------CSSEEEETTCCGGGCEEEEEEEEC
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC---------CCCEEEEccCChhhCeEeEEEEEc
Confidence 45677888899999999999999999999999999999999887543 234899999999999999999999
Q ss_pred CCCce-EEEEEEeeccCC---------------ccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCC
Q psy8139 530 RAGHS-ITKARLRLEAPP---------------TIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGG 593 (1101)
Q Consensus 530 ~~g~~-~~s~~l~V~~~p---------------~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~ 593 (1101)
..|.. ...+.|.|...+ .+...+ ....+..|..+.|.|.+.+.|.+.+.|++++..+....
T Consensus 87 ~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~ 163 (218)
T 3k0w_A 87 NFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEP---TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET 163 (218)
T ss_dssp TTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECC---CCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC
T ss_pred CCCCceeeEEEEEEEccCcccccccccccCCCceEEECC---CceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC
Confidence 88765 334677776653 222222 34577889999999999999999999999998886542
Q ss_pred ceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCC-ceeEEEEEEecC
Q psy8139 594 RYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGE-DVASFLVTVTDR 641 (1101)
Q Consensus 594 ~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~-~~~s~~l~v~~~ 641 (1101)
...|.|.++...|.|.|+|.|.|..|. .+....|.|...
T Consensus 164 ---------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 164 ---------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp ---------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred ---------CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 347999999999999999999998887 455667777653
No 136
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.68 E-value=8.2e-16 Score=172.34 Aligned_cols=259 Identities=18% Similarity=0.154 Sum_probs=173.8
Q ss_pred CceeEEccCCeEEEEEEEecc---------CCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCE-EEEEEEE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGI---------PTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEG-EIKCTAT 528 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~---------p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g-~Y~C~a~ 528 (1101)
..++.+.+|+++.|.|.+.+. |.+.++|++++..+....+. . .++ .|.|.++...|+| .|+|.|.
T Consensus 36 ~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~-~~~--~L~i~~v~~~D~Gs~Y~C~a~ 110 (329)
T 3oq3_B 36 TMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--V-KNG--DLWIANYTSNDSHRRYLCTVT 110 (329)
T ss_dssp EEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--E-ETT--EEEESSCCGGGGGCCEEEEEE
T ss_pred cceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--e-ecc--eEEEcCCChHhCCCcEEEEEE
Confidence 357779999999999999884 55799999998765543332 2 222 8999999999999 9999999
Q ss_pred eCCCceEEEEE-EeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecC-CCeeEEEECCeecCC-CCceEEEeecceEE
Q psy8139 529 NRAGHSITKAR-LRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMP-PPTARWLHNGEPLTS-GGRYEITHTDRYLN 605 (1101)
Q Consensus 529 n~~g~~~~s~~-l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p-~~~v~W~~~g~~l~~-~~~~~~~~~~~~~s 605 (1101)
|..|....... +.+..+|.+..++. ...+..|+.+.|.|.+.|.| .+.+.|++++..+.. ..++... ...
T Consensus 111 n~~g~~~~~~~~~v~~~~p~~~~~~~---~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~----~~~ 183 (329)
T 3oq3_B 111 TKNGDCVQGIVRSHIRKPPSCIPETY---ELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS----GQN 183 (329)
T ss_dssp CTTSCEEEEEEEEEECCCCSCEEEEE---ETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE----TTE
T ss_pred eCCCceeeEEEEEEEcCCCcEecccc---ceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC----CCE
Confidence 99887555433 33334444322211 11234689999999999999 999999999998863 3333332 468
Q ss_pred EEEccCCCCCCeEEEEEEEeC--CCCceeE----EEEEEecCCCCC----CccEEEEecCCeEEEEeecCCCCCCcccce
Q psy8139 606 LRISDARRADRGEYQAHGVNS--LGEDVAS----FLVTVTDRPLPP----GKAKVVMTLGKSVTLSWSEPEDDGGCKIGN 675 (1101)
Q Consensus 606 l~i~~l~~~~~y~y~c~A~N~--~G~~~~s----~~l~v~~~P~~P----~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~ 675 (1101)
|.|.++...|.|.|+|.|.|. .|..... ..+.|..+|..+ .........+..+.|.|...+.++.
T Consensus 184 L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~----- 258 (329)
T 3oq3_B 184 LIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLL----- 258 (329)
T ss_dssp EEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCC-----
T ss_pred EEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCC-----
Confidence 999999999999999999997 7655443 667777665321 1223445567789999986432110
Q ss_pred eEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCC-CCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCC
Q psy8139 676 YIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYD-GGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEP 754 (1101)
Q Consensus 676 Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~-~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 754 (1101)
+..+.+.|...... ..... .........+ . .....++|.++..
T Consensus 259 -------------------------~~~i~v~W~~~g~~i~~~~~-~~~~~~~~~~---------~-~~~~~L~I~~v~~ 302 (329)
T 3oq3_B 259 -------------------------VDDVLIDWENPSGWIIGLDF-GVYSILTSSG---------G-ITEATLYFENVTE 302 (329)
T ss_dssp -------------------------TTCCEEEEECTTSCBCCBCS-SEEEEEEEET---------T-EEEEEEEESSCCG
T ss_pred -------------------------CCCcEEEEEECCeeeeccCC-ceeeeecccC---------c-eeEeEEEEEeccH
Confidence 11246788753211 00000 0000000000 0 1346789999999
Q ss_pred CceE-EEEEEEEcCCcc
Q psy8139 755 GWRY-QFRITAENVVGF 770 (1101)
Q Consensus 755 ~t~Y-~~~V~A~n~~G~ 770 (1101)
.... .|.|.|.|..|.
T Consensus 303 ~D~G~~Y~C~a~N~~G~ 319 (329)
T 3oq3_B 303 EYIGNTYTCRGHNYYFD 319 (329)
T ss_dssp GGTTCEEEEEEECSSCE
T ss_pred HHCCCcEEEEEEecCCc
Confidence 9989 999999999996
No 137
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.68 E-value=1.4e-15 Score=156.25 Aligned_cols=86 Identities=31% Similarity=0.617 Sum_probs=67.6
Q ss_pred CCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEE
Q psy8139 343 KPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFR 422 (1101)
Q Consensus 343 ~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~ 422 (1101)
++|.+|..+.+ . .++.++++|+|.+|..+++.++.+|.|+++..+...|..... .....++.+.+|.|++.|.|+
T Consensus 4 ~~P~~P~~l~~---~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~ 78 (197)
T 3lpw_A 4 DTPGPPQDLKV---K-EVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVAT-NCHKTSWKVDQLQEGCSYYFR 78 (197)
T ss_dssp CSCCCCEEEEE---E-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEE-EECSSEEEECCCCTTCEEEEE
T ss_pred CCCCCCCCcEE---E-EecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeec-CCCccEEEEcCCCCCCEEEEE
Confidence 44555544443 3 678899999999997777778999999999887777766532 245678999999999999999
Q ss_pred EEEEecCCCCC
Q psy8139 423 ITAENVVGFSE 433 (1101)
Q Consensus 423 c~A~n~~G~~~ 433 (1101)
|.|.|..|.+.
T Consensus 79 V~a~~~~g~~~ 89 (197)
T 3lpw_A 79 VLAENEYGIGL 89 (197)
T ss_dssp EEEEETTEECC
T ss_pred EEEEcCccccC
Confidence 99999877653
No 138
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.68 E-value=1.1e-14 Score=172.16 Aligned_cols=254 Identities=14% Similarity=0.155 Sum_probs=152.6
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCC-CCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc-CC-
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEP-GPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PT- 481 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~-s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~- 481 (1101)
..+|.|.++++.|+|.|.|.+.|..|.... ...+..+.+.+......+|.+...+. ..+..|+.++|.|.+.|. |.
T Consensus 79 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~ 157 (475)
T 1iga_A 79 TAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQE 157 (475)
T ss_pred eEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeEEEEEEEeeecCCC
Confidence 357999999999999999999997652100 01112244555433334565543332 223689999999999987 65
Q ss_pred C-eEEEEECCEEeecCCcEEEE-ecCC----eeEEEEeecCCCCCEEEEEEEEeCCCceE-EEEEEeec-----------
Q psy8139 482 P-KVSWYKDGFEIFSSRRQRIV-TDND----ISTLIIHQAALMDEGEIKCTATNRAGHSI-TKARLRLE----------- 543 (1101)
Q Consensus 482 ~-~v~W~~~g~~~~~~~~~~~~-~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~-~s~~l~V~----------- 543 (1101)
+ .|+|++++............ ..++ .+.|+|..+...|.|.|+|.|.|..|... ....+.|.
T Consensus 158 p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~ 237 (475)
T 1iga_A 158 PLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTP 237 (475)
T ss_pred ceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCccccccccc
Confidence 4 99999987532111000011 0111 13588888888999999999999887421 12232231
Q ss_pred -------cCCcc-ccCCCCCCCeEEeeCCEEEEEEEEeecCC---CeeEEEECCeecCCCCce--EEEeec---ceEEEE
Q psy8139 544 -------APPTI-RLPKQYEDGLLFEMGEIIKLKVSMAGMPP---PTARWLHNGEPLTSGGRY--EITHTD---RYLNLR 607 (1101)
Q Consensus 544 -------~~p~~-~~~~~~~~~~~v~~g~~~~l~c~~~g~p~---~~v~W~~~g~~l~~~~~~--~~~~~~---~~~sl~ 607 (1101)
.+|.+ ..+|. ...+..|+.+.|.|.+.|.++ +.++| ++..+...... .....+ ..+.|.
T Consensus 238 ~~~~~~~~~p~v~~~~p~---~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~ 312 (475)
T 1iga_A 238 PTPSPSCCHPRLSLHRPA---LEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLP 312 (475)
T ss_pred ccCCCCCCCcEEEEcCCC---hHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEE
Confidence 12222 11111 112468999999999998754 69999 44443221111 000011 256799
Q ss_pred EccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEE------EecCCeEEEEeecC
Q psy8139 608 ISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVV------MTLGKSVTLSWSEP 665 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~------~~~~~sv~lsW~~p 665 (1101)
|.++...|.|.|+|.|.|..|.......+.+.....+|. +.+. ...+..+.|.|...
T Consensus 313 I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~-v~~~~~~~~~v~~g~~~~L~C~~~ 375 (475)
T 1iga_A 313 GCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPE-VHLLPPPSEELALNELVTLTCLAR 375 (475)
T ss_pred EchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCe-EEEECCChHHhccCCceEEEEEEe
Confidence 999999999999999999999765544454322233331 1111 12355688888853
No 139
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.68 E-value=7.8e-18 Score=196.86 Aligned_cols=309 Identities=13% Similarity=0.133 Sum_probs=173.3
Q ss_pred hhhhhhhcccccCcceEEEeeecccccccccceeeeccCC-CCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEE
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKP-PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGY 383 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~-p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y 383 (1101)
.+.|.|.++..+|+|.|.|.+.|..+. .+....+.|... +.+|................++|.|.... ..+. ..
T Consensus 77 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g---~~P~-p~ 151 (434)
T 1igy_B 77 TANIHLSSLTSDDSAVYYCVREGEVPY-WGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKG---YFPE-PV 151 (434)
T ss_dssp BBCEEECSBCGGGCSEECCCCSSSSCC-CCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEE---EBSS-CC
T ss_pred EEEEEECCCChHHCEEEEEEEEccccc-cCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEee---ecCC-Ce
Confidence 357999999999999999999774322 233345555432 22221100000000123455666655421 0000 00
Q ss_pred EEEEEecCCCc-e-----EEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccC---------
Q psy8139 384 LVEHRRTGSPY-W-----VRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS--------- 448 (1101)
Q Consensus 384 ~v~~~~~~~~~-w-----~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~--------- 448 (1101)
.+.|...+... . ............|.|.++...| |.|+|.|.|..|... +...+...
T Consensus 152 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-------~~~~~~~~~~~~~v~~~ 223 (434)
T 1igy_B 152 TVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTK-------VDKKIVPRDCGCKPCIC 223 (434)
T ss_dssp EEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCC-------EEEECCCCCCCCCCCCC
T ss_pred EEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCcc-------ceeeccCCCCCCccccC
Confidence 12222111100 0 0000000112468899999888 999999999887532 11111100
Q ss_pred -CCCCCee-eecCceeE-EccCCeEEEEEEEeccC----CCeEEEEECCEEeecCCcEEE--EecC---CeeEEEEeecC
Q psy8139 449 -PAAAPSF-IRALHDTT-ALEDEKVEFTVQVEGIP----TPKVSWYKDGFEIFSSRRQRI--VTDN---DISTLIIHQAA 516 (1101)
Q Consensus 449 -~~~~P~~-~~~p~~~~-v~~g~~v~L~C~~~g~p----~~~v~W~~~g~~~~~~~~~~~--~~~~---~~~~l~I~~l~ 516 (1101)
....|.+ ...|.... +..|++++|.|.+.|.+ .+.|+|++++..+........ ..++ ..+.|.|.++.
T Consensus 224 ~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 303 (434)
T 1igy_B 224 TVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQD 303 (434)
T ss_dssp CCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHH
T ss_pred CCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHH
Confidence 0111333 33333222 78899999999999884 358999999876543211100 0011 13479999999
Q ss_pred CCCCEEEEEEEEeCCCceEEEEEE----eeccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCeecC
Q psy8139 517 LMDEGEIKCTATNRAGHSITKARL----RLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGEPLT 590 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g~~~~s~~l----~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~~l~ 590 (1101)
..|+|.|+|.|.|..|.......+ .+..+|.+...+.... ...|+.+.|.|.+.|. |. +.|+|+++|..+.
T Consensus 304 ~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~---~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 380 (434)
T 1igy_B 304 WLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKE---QMAKDKVSLTCMITDFFPEDITVEWQSDGQAPE 380 (434)
T ss_dssp HHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSS---SSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCS
T ss_pred ccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHH---HhcCCcEEEEEEEEeeECCCeEEEEEECCEecC
Confidence 999999999999998865332222 3344565533222111 2246789999999985 43 4899999998875
Q ss_pred CCCceEE--Eeecc---eEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 591 SGGRYEI--THTDR---YLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 591 ~~~~~~~--~~~~~---~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
....... ...+. ...|.|......+.|.|+|.|.|....
T Consensus 381 ~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 381 NYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp CCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred CceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 3211111 11110 234666666666799999999998654
No 140
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.67 E-value=1.8e-15 Score=166.13 Aligned_cols=257 Identities=16% Similarity=0.168 Sum_probs=175.6
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.+...+.++.+.+|++++|.|.+.+ .+.|++++... ...........|.|.++...|+|.|+|.+.|.
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 73 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTGTYRCTELED 73 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCEEEEEECCC-
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCce-----EEEeccCCccEEEEeeeccccCEEEEEEEecc
Confidence 4566777778889999999999999987 49999765321 12222334468999999999999999999999
Q ss_pred CCceEEEEEEeeccCCcc-ccCCCCCCCeEEeeCCEEEEEEEEeecCCCe-eEEEE-CCeecCCCCceEEEeecceEEEE
Q psy8139 531 AGHSITKARLRLEAPPTI-RLPKQYEDGLLFEMGEIIKLKVSMAGMPPPT-ARWLH-NGEPLTSGGRYEITHTDRYLNLR 607 (1101)
Q Consensus 531 ~g~~~~s~~l~V~~~p~~-~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~-v~W~~-~g~~l~~~~~~~~~~~~~~~sl~ 607 (1101)
.|.......|.|..+|.. ...+ ....+..|+.+.|.|.+.+.+.+. +.|++ ++..+..+..+.+.. ...|.
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~~---~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~---~~~L~ 147 (289)
T 3ejj_X 74 PMAGSTTIHLYVKDPAHSWNLLA---QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSP---WRGFI 147 (289)
T ss_dssp ----CEEEEEEECCSSCSEEESC---SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEET---TTEEE
T ss_pred CCcceeEEEEEEeCCCcceeccc---ceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECC---CCCEE
Confidence 888888889999887754 2222 456788999999999999877665 99986 777776666665543 45699
Q ss_pred EccCCCCCCeEEEEEEE-eCCCCceeEEEEEEecCC-CCCCccEE-----EEecCCeEEEEeecCCCCCCcccceeEEEE
Q psy8139 608 ISDARRADRGEYQAHGV-NSLGEDVASFLVTVTDRP-LPPGKAKV-----VMTLGKSVTLSWSEPEDDGGCKIGNYIVEY 680 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~-N~~G~~~~s~~l~v~~~P-~~P~~~~~-----~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~ 680 (1101)
|.++...|.|.|+|.|. |..|..+....+.|...+ .+| .+.. ....+..+.|.|.....
T Consensus 148 i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p-~i~~~~~~~~~~~g~~~~l~C~~~~~------------- 213 (289)
T 3ejj_X 148 IRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPP-QIKLEPSKLVRIRGEAAQIVCSATNA------------- 213 (289)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCC-EEEEESSSEECCSSSCEEEEEEEEES-------------
T ss_pred EeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCC-eEEecCCceEEEeCCcEEEEEEeCCC-------------
Confidence 99999999999999999 444555667778887543 233 2111 22356788888875310
Q ss_pred EcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcc-eEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEE
Q psy8139 681 FRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVL-GYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQ 759 (1101)
Q Consensus 681 ~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~-~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 759 (1101)
.....+.|.... ..+. .....+ . .........+.|.++.......
T Consensus 214 --------------------~p~~~i~W~~~~----~~~~~~~~~~~--~--------~~~~~~~~~L~i~~v~~~d~G~ 259 (289)
T 3ejj_X 214 --------------------EVGFNVILKRGD----TKLEIPLNSDF--Q--------DNYYKKVRALSLNAVDFQDAGI 259 (289)
T ss_dssp --------------------SSCCEEEEEETT----EECCCCEEEEE--C--------SSSEEEEEEEEESSCCSSSCEE
T ss_pred --------------------CCceEEEEEECC----EEeeccCCccc--c--------cceEEeeEEEEEEeecccCCEE
Confidence 112367786531 1110 000000 0 0001234578999999999999
Q ss_pred EEEEEEcCCcc
Q psy8139 760 FRITAENVVGF 770 (1101)
Q Consensus 760 ~~V~A~n~~G~ 770 (1101)
|.|.|.|..|.
T Consensus 260 Y~C~a~N~~G~ 270 (289)
T 3ejj_X 260 YSCVASNDVGT 270 (289)
T ss_dssp EEEEEECSSCE
T ss_pred EEEEEEcCCCC
Confidence 99999999997
No 141
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.67 E-value=4.7e-16 Score=160.70 Aligned_cols=178 Identities=13% Similarity=0.119 Sum_probs=129.9
Q ss_pred cCceeEEccCCeEEEEEEEeccCC-----CeEEEEE-CCEEeecCCcEEEEecC---CeeEEEEeecCCCCCEEEEEEEE
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIPT-----PKVSWYK-DGFEIFSSRRQRIVTDN---DISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p~-----~~v~W~~-~g~~~~~~~~~~~~~~~---~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.+..+.+..|+++.|.|.+.+.|. +.+.|++ ++.......+..+.... +..+|.|.++...|+|.|+|.+.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 345678899999999999999886 7899999 44444344455544321 45689999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEE
Q psy8139 529 NRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRI 608 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i 608 (1101)
|..|.......|.|..++..+.. ....+..|+.+.|.|.+.|.|.|.+.|++++..+.. .......+....+.+
T Consensus 88 ~~~~~~~~~~~l~V~~~~~~p~~----~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i 161 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASYMRIDT----RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSV 161 (202)
T ss_dssp ETTEEEEEEEEEEEEBCCCCEEE----EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEE
T ss_pred eCCCcceEEEEEEecCCCCcccE----EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEE
Confidence 99988877888888875422110 001335699999999999999999999998765531 111222222355667
Q ss_pred ccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC
Q psy8139 609 SDARRADRGEYQAHGVNSLGEDVASFLVTVTDR 641 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~ 641 (1101)
.++...|.|.|+|.|.|..|.......+.|..+
T Consensus 162 ~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 162 LRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp EEECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred EEEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 788899999999999999999888887777644
No 142
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.67 E-value=6.8e-16 Score=161.27 Aligned_cols=187 Identities=20% Similarity=0.256 Sum_probs=139.9
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecC--CcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSS--RRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~--~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.+|.| ..|.++.+..|+++.|.|.+.|.|.|.+.|+++|..+... .++.+...+....|.|.++...|.|.|+|.|.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 45666 5777889999999999999999999999999999988765 45666666667899999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEee----cCCC--eeEEEECCeecCCCCceEEEeecc
Q psy8139 529 NRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAG----MPPP--TARWLHNGEPLTSGGRYEITHTDR 602 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g----~p~~--~v~W~~~g~~l~~~~~~~~~~~~~ 602 (1101)
|..|.......|.|..+|..+.... ....+..+.+.|.... .|.. .+.|..++................
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p~~~~-----~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~ 171 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSPSIDQ-----VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 171 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCCEEEE-----EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHH
T ss_pred ECCCceEEEEEEEECCCCCCCcceE-----EEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccc
Confidence 9999998888899987765432111 2234667888887432 2222 477887764321110011111112
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCC
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPL 643 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~ 643 (1101)
...+.|.+|.+++.|.|+|.|.|..|.+..+..+.+.++|.
T Consensus 172 ~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 172 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp HTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred cccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccc
Confidence 37899999999999999999999999998888777877653
No 143
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.67 E-value=9.3e-16 Score=159.93 Aligned_cols=179 Identities=15% Similarity=0.087 Sum_probs=126.0
Q ss_pred cCceeEEccC--CeEEEEEEEeccCCCeEEEEEC---CEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCC
Q psy8139 458 ALHDTTALED--EKVEFTVQVEGIPTPKVSWYKD---GFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAG 532 (1101)
Q Consensus 458 ~p~~~~v~~g--~~v~L~C~~~g~p~~~v~W~~~---g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g 532 (1101)
.|..+.+.+| ++++|.|.+.+ |.+.++|++. +..+.....+.....+ .|.|.++...|+|.|+|.|.|..+
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC----
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc---cEEEccCChhcCceEEEEEEECCe
Confidence 4678889999 99999999987 7789999884 6555544433332222 799999999999999999998544
Q ss_pred ceEEE-EEEeecc--CCccccCCCCCCCeEEeeCCEEEEEEEEeecC--CCeeEEEECCeecCCCCc-eEEEe-------
Q psy8139 533 HSITK-ARLRLEA--PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMP--PPTARWLHNGEPLTSGGR-YEITH------- 599 (1101)
Q Consensus 533 ~~~~s-~~l~V~~--~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p--~~~v~W~~~g~~l~~~~~-~~~~~------- 599 (1101)
...+. ..|.|.. +|.+...+ ...+.+..|+++.|.|.+.|.| .+.+.|.++|..+..... .....
T Consensus 89 ~~~s~~~~l~v~~~~~p~~~~~~--~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~ 166 (213)
T 2x1w_L 89 SYQSIMYIVVVVGYRIYDVVLSP--SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEM 166 (213)
T ss_dssp CEECCCEEEEECBCCEEEEEEES--CSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSC
T ss_pred eEEEEEEEEEEeCCcccceEEcC--CCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccc
Confidence 43332 5666644 22222222 2344788999999999999865 457999998876532211 00000
Q ss_pred ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCC
Q psy8139 600 TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRP 642 (1101)
Q Consensus 600 ~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P 642 (1101)
.....+|.|.+++..|+|.|+|.|.|..|..+.++.|.|...|
T Consensus 167 ~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 167 KKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred eeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 1224679999999999999999999999999889999998765
No 144
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.67 E-value=1.5e-16 Score=179.64 Aligned_cols=183 Identities=19% Similarity=0.279 Sum_probs=149.4
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCE-EEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEG-EIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g-~Y~C~a~ 528 (1101)
-.+|.+...|.+..+.+|+++.|.|.+.|.|.+.+.|++++..+...... ......++|.|.++...|+| .|+|.|.
T Consensus 156 c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~~Y~C~a~ 233 (347)
T 2ifg_A 156 CGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK--SGGLPSLGLTLANVTSDLNRKNVTCWAE 233 (347)
T ss_dssp CCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC--CCCSSEEEEEEESCCSTTTTCCEEECCE
T ss_pred CCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc--ceecccceEEEeeCChHHCCCeEEEEEE
Confidence 36788888899999999999999999999999999999988654321110 12334568999999999999 9999999
Q ss_pred eCCCceEEEEEEeeccCCcc-ccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEee-------
Q psy8139 529 NRAGHSITKARLRLEAPPTI-RLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHT------- 600 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~-~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~------- 600 (1101)
|..|.....+.|.|..+|.+ .. .+..|..+.|.|.+.|.|.|.+.|+++|..+..+........
T Consensus 234 n~~g~~~~~~~l~V~~~P~i~~~--------~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~ 305 (347)
T 2ifg_A 234 NDVGRAEVSVQVNVSFPASVQLH--------TAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANET 305 (347)
T ss_dssp ETTEECCEEECCCCBEEEEEEEC--------CCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCC
T ss_pred cCCCCEEEEEEEEEcCCCeeeec--------cCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCc
Confidence 99999888888899888875 11 234688999999999999999999999999886544333211
Q ss_pred cceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCC
Q psy8139 601 DRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRP 642 (1101)
Q Consensus 601 ~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P 642 (1101)
...++|.|.++...|.|.|+|.|.|..|....++.+.|..+|
T Consensus 306 ~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 306 VRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp CEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred ccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 236789999999999999999999999998888888887654
No 145
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.66 E-value=6.7e-16 Score=163.60 Aligned_cols=184 Identities=13% Similarity=0.057 Sum_probs=114.6
Q ss_pred CcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc-
Q psy8139 718 PVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR- 796 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~- 796 (1101)
.+.+|.|+|+..+...+..... ....++++|.+|.|++.|.|+|.|.|..|.|++|....+.+. +..|.. |.++.
T Consensus 32 ~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~--~~~P~~-P~~l~~ 107 (234)
T 3f7q_A 32 KPMGYRVKYWIQGDSESEAHLL-DSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH--QEVPSE-PGRLAF 107 (234)
T ss_dssp CCCEEEEEEEETTSCGGGCEEE-EESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECC--CCCCCC-CCCCEE
T ss_pred ccceEEEEEEECCCCccceEEE-cCCccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcC--CCCCCC-CCccEE
Confidence 5778888888765543322221 267789999999999999999999999999888755444333 244544 44444
Q ss_pred -cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCC----CceeeeeccccccCC
Q psy8139 797 -ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNE----DDYDIVETNEHTGTG 871 (1101)
Q Consensus 797 -~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~----~~~~~v~~~~~~~~~ 871 (1101)
...++++.+.|.+|.. .++++. .|.|.|+..+.... |....+.. ...
T Consensus 108 ~~~~~~sv~l~W~~p~~------------~~g~i~------------~Y~v~~~~~~~~~~~~~~~~~~~~~~----~~~ 159 (234)
T 3f7q_A 108 NVVSSTVTQLSWAEPAE------------TNGEIT------------AYEVCYGLVNDDNRPIGPMKKVLVDN----PKN 159 (234)
T ss_dssp EECSSSCEEEECCCCSC------------CSSCCC------------EEEEEEEEBCTTSCBSSCCEECCCSC----TTC
T ss_pred EEecCCEEEEEEcCCCC------------CCCcee------------EEEEEEEECCCCCCccCcceEEEecC----Ccc
Confidence 4566777889987533 234555 88888876554322 22222211 111
Q ss_pred CCCCCCCccCcccce--eeccccccc---Cc-eeecccCCCCccCCCCCChhhhhhhhhhhccccccccccchhhccc
Q psy8139 872 APSDNENESDYFPEK--TIDESVYGY---DT-IVYGYDSDDLDRHYPTLDEEEEEEDRESLVKDRESSVKGKEEEAKV 943 (1101)
Q Consensus 872 ~~~~l~~~~~~t~Y~--V~a~n~~G~---~~-~v~~~t~e~~P~~~P~~v~~~~~~~n~t~v~vp~~~~nG~i~gY~I 943 (1101)
....+.+|.+.+.|. |+|.|..|. +. .+...|.+++|..+|..-.+..+ + ...+..+++|-+
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~~P~~~~~~i~--~--------~~~g~~~~~~~~ 227 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIV--D--------AQSGEDYDSFLM 227 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCCCCCCTTCCEE--E--------TTC---------
T ss_pred eEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCCCccccceeeE--E--------cccCcchheeee
Confidence 223444555999999 999999997 33 47788888889888876655544 1 234557788887
No 146
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.66 E-value=1.1e-15 Score=153.86 Aligned_cols=167 Identities=18% Similarity=0.235 Sum_probs=131.0
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCe-EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK-VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~-v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
..+|.+...|....+.+|++++|.|.+.+.|.+. +.|++++..+.. ....|.|.++...|+|.|+|.+.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~ 74 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS----------QASSYFIDAATVNDSGEYRCQTN 74 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------SCSEEEESSCCGGGCEEEEEECS
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------CceEEEEeCCCcccCEEEEEEee
Confidence 4678888888888999999999999999988776 889999987753 23389999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC-eeEEEECCeecCCCCceEEEeecceEEEE
Q psy8139 529 NRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP-TARWLHNGEPLTSGGRYEITHTDRYLNLR 607 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~sl~ 607 (1101)
|..+ +....|.|..++....++ ...+..|+.+.|.|.+.+.+++ .+.|+++|..+.. ......|.
T Consensus 75 n~~~--s~~~~l~V~~~~~~~~~~----~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~--------~~~~~~L~ 140 (175)
T 1fnl_A 75 LSTL--SDPVQLEVHIGWLLLQAP----RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY--------FHHNSDFH 140 (175)
T ss_dssp SSCC--CCCEEEEEECSSEEEECS----CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE--------EEECCCEE
T ss_pred CCcc--cccEEEEEeCCCceeeCC----CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC--------CCCCCEEE
Confidence 8554 345667776554433322 2367889999999999987664 9999999987632 12256799
Q ss_pred EccCCCCCCeEEEEEEEeCCCC-ceeEEEEEEec
Q psy8139 608 ISDARRADRGEYQAHGVNSLGE-DVASFLVTVTD 640 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~N~~G~-~~~s~~l~v~~ 640 (1101)
|.++...|.|.|+|.|.|..|. .+....|.|.+
T Consensus 141 i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 141 IPKATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EcccChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 9999999999999999997664 34466666654
No 147
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.66 E-value=3.6e-15 Score=154.38 Aligned_cols=87 Identities=28% Similarity=0.479 Sum_probs=63.8
Q ss_pred ccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCC-CceEEcCc-cccccceEEEcCccCCcc
Q psy8139 341 IKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGS-PYWVRASP-HMVEDTELMVSGLEPGWR 418 (1101)
Q Consensus 341 v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~-~~w~~~~~-~~~~~~~l~i~~L~p~d~ 418 (1101)
+..+|.+|..+.+. . +.++++|+|.+|. +++.+|.+|.|+++.... ..|..... .......+.+ +|.|++.
T Consensus 2 v~~~P~~P~~~~~~----~-~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~ 74 (205)
T 1cfb_A 2 VQDVPNAPKLTGIT----C-QADKAEIHWEQQG-DNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWAN 74 (205)
T ss_dssp CCCCCCCCEEEEEE----E-CSSEEEEEEECCC-CTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEE
T ss_pred cccCCCCCCCcEEE----e-cCCEEEEEEECcc-cCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCE
Confidence 44566666665553 5 8899999999994 566799999999987543 55754322 2234456777 9999999
Q ss_pred EEEEEEEEecCCCCCC
Q psy8139 419 YQFRITAENVVGFSEP 434 (1101)
Q Consensus 419 y~y~c~A~n~~G~~~~ 434 (1101)
|.|+|.|.|..|.+.+
T Consensus 75 Y~~~V~A~n~~G~~~~ 90 (205)
T 1cfb_A 75 YTFRVIAFNKIGASPP 90 (205)
T ss_dssp EEEEEEEEETTEECCC
T ss_pred EEEEEEEEECCccCCC
Confidence 9999999998887654
No 148
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.66 E-value=3.2e-16 Score=168.57 Aligned_cols=203 Identities=11% Similarity=0.133 Sum_probs=124.8
Q ss_pred ccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccC-----CCeEEEE
Q psy8139 413 LEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIP-----TPKVSWY 487 (1101)
Q Consensus 413 L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p-----~~~v~W~ 487 (1101)
++++|+|.|+|.|. |....+ +.+.+ ..+|.+...|..+.+.+|++++|.|.+.+.| .+.+.|+
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~-----~~~~~----~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~ 78 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTN-----YWMNW----LRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWL 78 (254)
T ss_dssp ---------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEE
T ss_pred ecCCccEEEEEcCc---hhhhhh-----hhhhe----eeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEE
Confidence 78899999999998 332211 11111 1366777778899999999999999999988 4899999
Q ss_pred ECC--EEe------------ecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EEEEeecc---CCccc
Q psy8139 488 KDG--FEI------------FSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KARLRLEA---PPTIR 549 (1101)
Q Consensus 488 ~~g--~~~------------~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~~l~V~~---~p~~~ 549 (1101)
+++ ..+ ....++.+...++..+|.|.++...|+|.|+|.|.|..+.... ...|.|.. +|.+.
T Consensus 79 k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~ 158 (254)
T 2c1o_A 79 LQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVS 158 (254)
T ss_dssp EECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEE
T ss_pred EeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeE
Confidence 742 211 1124666665666779999999999999999999998664322 24566653 34433
Q ss_pred cCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCeecCCCC--ceEEEeec-----ceEEEEEccCCCCCCeEEE
Q psy8139 550 LPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGEPLTSGG--RYEITHTD-----RYLNLRISDARRADRGEYQ 620 (1101)
Q Consensus 550 ~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~~l~~~~--~~~~~~~~-----~~~sl~i~~l~~~~~y~y~ 620 (1101)
..+.. .....|+.+.|.|.+.|. |. +.++|+++|..+..+. .......+ ..+.|.|.++...|.|.|+
T Consensus 159 ~~~~~---~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~ 235 (254)
T 2c1o_A 159 IFPPS---SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYT 235 (254)
T ss_dssp EECCC---HHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEE
T ss_pred eecCC---hhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEE
Confidence 21110 112247799999999984 44 5699999998876541 11111111 1467999999999999999
Q ss_pred EEEEeCCCCc
Q psy8139 621 AHGVNSLGED 630 (1101)
Q Consensus 621 c~A~N~~G~~ 630 (1101)
|.|.|.....
T Consensus 236 C~a~n~~~~~ 245 (254)
T 2c1o_A 236 CEATHKTSTS 245 (254)
T ss_dssp EEEECTTCSS
T ss_pred EEEEcCCCCC
Confidence 9999987654
No 149
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.66 E-value=7.3e-16 Score=158.40 Aligned_cols=170 Identities=12% Similarity=0.061 Sum_probs=126.6
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.+...|.. .+..|++++|.|.+.+ |.+.+.|++++..+.... ...........|.|.++...|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR-QNPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE-ECCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc-cccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 56778777877 7899999999999998 678999999987654311 11111244568999999999999999999999
Q ss_pred CCc--eEEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCc-eEEEeecceE
Q psy8139 531 AGH--SITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGR-YEITHTDRYL 604 (1101)
Q Consensus 531 ~g~--~~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~-~~~~~~~~~~ 604 (1101)
.|. .+....|.|.. +|.+...+. ..+..|+.++|.|.+.+. .+.+.|+++|..+..... ..........
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~~~~~~~----~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~ 155 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAYSKPTLSALPS----PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQA 155 (196)
T ss_dssp TEEBCCCCCEEEEEECSSCCCEEEEESC----SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEE
T ss_pred CcccCCCccEEEEecCCCCCCEEEeCCc----ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcce
Confidence 883 23456677754 333433222 257789999999999884 468999999987654322 1222233467
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCC
Q psy8139 605 NLRISDARRADRGEYQAHGVNSLG 628 (1101)
Q Consensus 605 sl~i~~l~~~~~y~y~c~A~N~~G 628 (1101)
.|.|.++...|.|.|+|.|.|..+
T Consensus 156 ~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 156 EFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEECSCCGGGCEEEEEEEECGGG
T ss_pred EEEeCCCcccCCCeEEEEEEcCCC
Confidence 899999999999999999999877
No 150
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.66 E-value=3.3e-16 Score=163.22 Aligned_cols=177 Identities=15% Similarity=0.157 Sum_probs=134.1
Q ss_pred cCceeEEccCCeEEEEEEEeccC----CCeEEEEE----------------CCEEeec-----CCcEEEEe---cCCeeE
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIP----TPKVSWYK----------------DGFEIFS-----SRRQRIVT---DNDIST 509 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p----~~~v~W~~----------------~g~~~~~-----~~~~~~~~---~~~~~~ 509 (1101)
.+..+.+.+|++++|.|.+.+.| .+.+.|++ ++..+.. ..+..+.. ..+..+
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34567889999999999999877 46899988 3433321 23343322 123458
Q ss_pred EEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEE-eecCCCeeEEEECCe-
Q psy8139 510 LIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSM-AGMPPPTARWLHNGE- 587 (1101)
Q Consensus 510 l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~-~g~p~~~v~W~~~g~- 587 (1101)
|.|.++...|+|.|+|.+.|..|.......|.|..+|.+...+.. ..+..|..+.|.|.+ .+.|.+.+.|++++.
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~---~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~ 162 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVD---GSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDS 162 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEE---SCCBTTCCEEEEEECSBCCSSCEEEEEECSTT
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeee---cceecCCcEEEEecCCCCCCCCEEEEEECCCC
Confidence 999999999999999999999998888889999988776443221 135679999999999 899999999999543
Q ss_pred -ecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC
Q psy8139 588 -PLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDR 641 (1101)
Q Consensus 588 -~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~ 641 (1101)
.+...... ......|.|.++...|.|.|+|.|.|..|....+..|.|..+
T Consensus 163 ~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 163 QTMPTPWLA----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CCCCGGGGG----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred CccCcccee----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 33221111 112458999999999999999999999999888888888743
No 151
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=6.1e-15 Score=149.68 Aligned_cols=165 Identities=21% Similarity=0.340 Sum_probs=132.0
Q ss_pred eEEccCCeEEEEEEEeccCCC--eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEE
Q psy8139 462 TTALEDEKVEFTVQVEGIPTP--KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKAR 539 (1101)
Q Consensus 462 ~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~ 539 (1101)
..+.+|++++|.|.+.+.|.| .+.|++++..+...... .....|.|. ...|+|.|+|.|.|. ....+.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~ 77 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPE---PMGTAN 77 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEEST---TSCEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECC---cCcEEE
Confidence 457889999999999988877 89999999888654321 223466666 688999999999983 335678
Q ss_pred EeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecC-CCeeEEEE---CCe-ecCC--CCceEEEeecceEEEEEccCC
Q psy8139 540 LRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMP-PPTARWLH---NGE-PLTS--GGRYEITHTDRYLNLRISDAR 612 (1101)
Q Consensus 540 l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p-~~~v~W~~---~g~-~l~~--~~~~~~~~~~~~~sl~i~~l~ 612 (1101)
|.|..+|.+...+ ....+..|+.+.|.|.+.+.| .+.+.|++ ++. .+.. ..++.+...+....|.|.++.
T Consensus 78 l~V~~~P~~~~~~---~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 154 (184)
T 3b5h_A 78 IQLHGPPRVKAVK---SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLN 154 (184)
T ss_dssp EEECCSCCCEESC---SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCC
T ss_pred EEEecCCceeecC---CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecc
Confidence 8888888876555 234688899999999999999 89999999 443 4432 256777766777899999999
Q ss_pred -CCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy8139 613 -RADRGEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 613 -~~~~y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
..|.|.|+|.|.|..|.......|.|.
T Consensus 155 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 155 MEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp TTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 999999999999999998888888775
No 152
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.66 E-value=1.7e-15 Score=168.48 Aligned_cols=257 Identities=13% Similarity=0.149 Sum_probs=167.3
Q ss_pred eecCceeEEccCCeEEEEEEEeccCCC-----eEEEEECCEEe-------------ecCCcEEEEec-----CCeeEEEE
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGIPTP-----KVSWYKDGFEI-------------FSSRRQRIVTD-----NDISTLII 512 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~p~~-----~v~W~~~g~~~-------------~~~~~~~~~~~-----~~~~~l~I 512 (1101)
+..|.++.+..|++++|.|.+.+.+.+ .|.|++++... ....++.+... .+..+|.|
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEE
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEE
Confidence 456777888999999999999987766 48999986421 12223332211 12347999
Q ss_pred eecCCCCCEEEEEEEEe-CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEe-ecCCCeeEEEECCeecC
Q psy8139 513 HQAALMDEGEIKCTATN-RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMA-GMPPPTARWLHNGEPLT 590 (1101)
Q Consensus 513 ~~l~~~d~g~Y~C~a~n-~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~-g~p~~~v~W~~~g~~l~ 590 (1101)
.++...|+|.|+|.+.+ ..|.....+.|.+..+|.+...+. ...+..+....+.|.+. +.|.+.+.|++++..+.
T Consensus 84 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~---~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~ 160 (313)
T 4fqp_A 84 FGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQ---KVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMP 160 (313)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEEC---CBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEE
T ss_pred CcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceeccc---ceEeecCceEEEEEEccCccCCcEEEeecCCcccc
Confidence 99999999999998865 445566677888888776654332 22455677888899765 78999999999987765
Q ss_pred CCCceEEEeecc---eEEEEEccCCCCCCeEEEEEEEeCCCCceeEE--EEEEecCCCC---CCccEEEEecCCeEEEEe
Q psy8139 591 SGGRYEITHTDR---YLNLRISDARRADRGEYQAHGVNSLGEDVASF--LVTVTDRPLP---PGKAKVVMTLGKSVTLSW 662 (1101)
Q Consensus 591 ~~~~~~~~~~~~---~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~--~l~v~~~P~~---P~~~~~~~~~~~sv~lsW 662 (1101)
..........+. .+.|.|......|.|.|+|.|.|..|...... .+.|..+|.. +... .....+..++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~-~~~~~g~~v~l~C 239 (313)
T 4fqp_A 161 NTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDN-NWYLGQNEATLTC 239 (313)
T ss_dssp EEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCS-CEETTCCCEEEEE
T ss_pred ccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccc-eeecCCCeEEEEE
Confidence 322211111111 34688888989999999999999888765544 3334333310 0010 1123456788888
Q ss_pred ecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeeccccc
Q psy8139 663 SEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMV 742 (1101)
Q Consensus 663 ~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~ 742 (1101)
...+. +.-..+.|... |.++.. . . ..
T Consensus 240 ~~~g~---------------------------------P~p~~v~W~~~----~~~l~~-----------~-~-----~~ 265 (313)
T 4fqp_A 240 DARSN---------------------------------PEPTGYNWSTT----MGPLPP-----------F-A-----VA 265 (313)
T ss_dssp EEEEE---------------------------------SCCCEEEEEET----TBSCCT-----------T-E-----EE
T ss_pred EecCC---------------------------------CCCcEEEEEEC----CEECCC-----------c-e-----EE
Confidence 75211 11124667642 111110 0 0 02
Q ss_pred CccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 743 EDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 743 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
....++|.++.......|.|.|.|..|.
T Consensus 266 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 293 (313)
T 4fqp_A 266 QGAQLLIRPVDKPINTTLICNVTNALGA 293 (313)
T ss_dssp ETTEEEECCCSSCCEEEEEEEEECSSCE
T ss_pred eCCEEEECcCChhhCEEEEEEEEeCCCc
Confidence 3457899999999999999999999996
No 153
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.66 E-value=1.2e-15 Score=177.82 Aligned_cols=116 Identities=22% Similarity=0.204 Sum_probs=85.7
Q ss_pred cccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecC
Q psy8139 312 NQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTG 391 (1101)
Q Consensus 312 ~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~ 391 (1101)
|....+.|.|.|++.|..|...+++.......+|++|..+.. .++.++++|+|.+|...||.++.+|.|+++..+
T Consensus 301 ~S~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl~~-----~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~ 375 (536)
T 3fl7_A 301 HTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTA-----VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCW 375 (536)
T ss_dssp SEECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCEEE-----ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEEC
T ss_pred CCCCCCCCccEEEEeccccccCCCccccccccCCCcccceEE-----EecCCEEEEEEeCCcCCCCCceeEEEEEEEecc
Confidence 445678899999999999988777666666677777766633 577899999999998778878999999998632
Q ss_pred C--CceEEc--------CccccccceEEEcCccCCccEEEEEEEEecCCCC
Q psy8139 392 S--PYWVRA--------SPHMVEDTELMVSGLEPGWRYQFRITAENVVGFS 432 (1101)
Q Consensus 392 ~--~~w~~~--------~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~ 432 (1101)
. ..|... ........+++|.+|.|++.|.|+|.|.|..|.+
T Consensus 376 ~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~ 426 (536)
T 3fl7_A 376 PESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGL 426 (536)
T ss_dssp C-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGG
T ss_pred CCCCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCC
Confidence 1 122211 1111345778899999999999999998876643
No 154
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.66 E-value=2.4e-14 Score=164.40 Aligned_cols=395 Identities=15% Similarity=0.126 Sum_probs=223.7
Q ss_pred hhhhhhcccccCcceEEEeeecccccccccc-eeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCC-CcCeeEE
Q psy8139 306 AKKTADNQFENQAPLYVRLEEAITGLNVGTD-LYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDG-GSPVLGY 383 (1101)
Q Consensus 306 ~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~-~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g-~~~i~~Y 383 (1101)
..+.|..+..+| ++.|+- ...+.+...+ +.+.....-..|..|..|....+....++.|+|......- ...-..|
T Consensus 45 ~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~ 121 (483)
T 3e0g_A 45 TSIKIPALSHGD--YEITIN-SLHDFGSSTSKFTLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIW 121 (483)
T ss_dssp SBCCEECCSSSC--CCEEEE-CSSCC----CCCEECCSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEEE
T ss_pred cceEeecCCccc--eEEEEc-ccCCCCCCceeEEEEcccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceEE
Confidence 346677788888 555544 2333333322 4333334334555666665554556689999998752110 1123467
Q ss_pred EEEEEecCCCc--eEEcCccc--cccceE--E-EcCc-cCCccEEEEEEEE-e---cCCCCCCCCCCcceEEEeccCCCC
Q psy8139 384 LVEHRRTGSPY--WVRASPHM--VEDTEL--M-VSGL-EPGWRYQFRITAE-N---VVGFSEPGPLSEPLTVTYQRSPAA 451 (1101)
Q Consensus 384 ~v~~~~~~~~~--w~~~~~~~--~~~~~l--~-i~~L-~p~d~y~y~c~A~-n---~~G~~~~s~~s~~vtv~~~~~~~~ 451 (1101)
.|+........ |....... ..++.+ + -++| -+...+..++++. + ..|.+.+|.+|..-++... ...
T Consensus 122 ~i~i~r~~~~~~v~~~~~~~~~~~~~~~~~w~w~s~~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~--~~~ 199 (483)
T 3e0g_A 122 EIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWI--PDS 199 (483)
T ss_dssp EEEEESSSSCEEEEEEEEEECGGGCCEEEEEEEECSSCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCC--CCS
T ss_pred EEEEEEcCCccEEEEEEEEEEecCCCceEEEEecCCCCCCCCccEEEEEEEecccccCCCCCCcCCCChhhcccc--CCC
Confidence 77765544332 32211111 111111 1 1222 3567788888887 3 3566677888766655332 112
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCC--CCEEEEEEEEe
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALM--DEGEIKCTATN 529 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~--d~g~Y~C~a~n 529 (1101)
.+ ...|.+..+..|+++++.|..... ..... +................+++.|++.. ....|.|...
T Consensus 200 ~~--~ifP~~~vv~~GS~vt~~Ci~~~~---~~~~~-----l~~~~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~- 268 (483)
T 3e0g_A 200 QT--KVFPQDKVILVGSDITFCCVSQEK---VLSAL-----IGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTE- 268 (483)
T ss_dssp SC--CEESCSEEEETTCCEEEEECCSSC---EEEEE-----SSSCCBCCEECSSSCEEEEECSCCCCCSSCEEEEEEES-
T ss_pred Cc--EEeccCCEEeCCCCEEEEEEeCcc---cccee-----cCcccceeEEecCCEEEEEEeCCCCccCccceEEEecC-
Confidence 22 567888889999999999987631 12221 22111111223445568888888763 3356889742
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeec---CCCCceEEEe-------
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPL---TSGGRYEITH------- 599 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l---~~~~~~~~~~------- 599 (1101)
.....+.|.|..||..+ ..+.|.........++|....... .....|.+..
T Consensus 269 ---~~~~g~~l~vg~PP~~P----------------~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~~~ 329 (483)
T 3e0g_A 269 ---DNIFGTVIFAGYPPDTP----------------QQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYV 329 (483)
T ss_dssp ---SCEEEEEEEEECCCCCC----------------EEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCCEE
T ss_pred ---CcccceEEECcCCCCCC----------------CccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCCCc
Confidence 23445667777766322 223343333333334443311110 0011111110
Q ss_pred --------ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEe--cCCCCCCccEEEEecCCeEEEEeecCCCCC
Q psy8139 600 --------TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVT--DRPLPPGKAKVVMTLGKSVTLSWSEPEDDG 669 (1101)
Q Consensus 600 --------~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~--~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~ 669 (1101)
.+....+.|.++.+.+.|.|+|.|.|..|.......+.+. ..|.||.++.+.....+++.|+|++|..
T Consensus 330 ~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~-- 407 (483)
T 3e0g_A 330 RLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGN-- 407 (483)
T ss_dssp EECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSC--
T ss_pred cccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcccceEEEeccccCCCCCeeeEEEEecCCeEEEEECCCCC--
Confidence 1234578888999999999999999999987754322222 4688888887765556666666665531
Q ss_pred CcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCC-ceeecccc--cCccE
Q psy8139 670 GCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY-WVRASPHM--VEDTE 746 (1101)
Q Consensus 670 g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~-~~~~~~~~--~~~~~ 746 (1101)
.++.+..|.|.|+..+... |....... ....+
T Consensus 408 ---------------------------------------------~~~~~L~YeVrYr~~~~~~~~~~vsv~~~~~~~~s 442 (483)
T 3e0g_A 408 ---------------------------------------------FAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYL 442 (483)
T ss_dssp ---------------------------------------------CTTSBCCCEEEEECSSSCCCEEECCCBCCSSSBCC
T ss_pred ---------------------------------------------CCCceEEEEEEEEECCCCCceEEEEEeccCCceeE
Confidence 1234678999998876643 54432211 12336
Q ss_pred EEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 747 LMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 747 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
++|.+|.|++.|.|+|+|. ..|.|.+|+++......
T Consensus 443 ~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~ 478 (483)
T 3e0g_A 443 VALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHL 478 (483)
T ss_dssp CCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCC
T ss_pred EEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeE
Confidence 7899999999999999999 77887777777655443
No 155
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.64 E-value=8.4e-15 Score=163.96 Aligned_cols=271 Identities=12% Similarity=0.123 Sum_probs=160.5
Q ss_pred eeeecCceeEEccCCeEEEEEEEecc-CCCeEEEEECCEEe----ec-----CCcEEEEec-----CCeeEEEEeecCCC
Q psy8139 454 SFIRALHDTTALEDEKVEFTVQVEGI-PTPKVSWYKDGFEI----FS-----SRRQRIVTD-----NDISTLIIHQAALM 518 (1101)
Q Consensus 454 ~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~~v~W~~~g~~~----~~-----~~~~~~~~~-----~~~~~l~I~~l~~~ 518 (1101)
.+...|.++.+.+|+++.|.|.+.+. |.+.+.|++++... .. ..++..... .....|.|.++...
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPA 84 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGG
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccc
Confidence 45566788899999999999999987 88999999986421 11 113332211 34458999999999
Q ss_pred CCEEEEEEEEeCCCceE-----EEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC--eeEEEECCeecCC
Q psy8139 519 DEGEIKCTATNRAGHSI-----TKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP--TARWLHNGEPLTS 591 (1101)
Q Consensus 519 d~g~Y~C~a~n~~g~~~-----~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~--~v~W~~~g~~l~~ 591 (1101)
|+|.|+|.|.|..|... ..+.|.|..+|..+.... ....+..|+.+.|.|.+.|.|.+ .+.|+++|..+..
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~--~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 85 DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSG--PAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp GCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEEC--CSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred cCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeec--cccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 99999999999876421 235777776554321110 11356779999999999998765 8999999998875
Q ss_pred CCceEEEe-ec----ceEEEEEccCCCCCCeEEEEEEEeCCCCc-eeEEEEEEe-cCCCCCCccEEE---EecCCeEEEE
Q psy8139 592 GGRYEITH-TD----RYLNLRISDARRADRGEYQAHGVNSLGED-VASFLVTVT-DRPLPPGKAKVV---MTLGKSVTLS 661 (1101)
Q Consensus 592 ~~~~~~~~-~~----~~~sl~i~~l~~~~~y~y~c~A~N~~G~~-~~s~~l~v~-~~P~~P~~~~~~---~~~~~sv~ls 661 (1101)
........ .+ ....|.|......+.|.|+|.|.|..|.. .......+. ....+|. +.+. ...+..++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~-i~~~~~~~~~G~~v~l~ 241 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPT-LEVTQQPVRAENQVNVT 241 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCE-EEEEEECCSSTTCCEEE
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCE-EEEecCCcCCCCcEEEE
Confidence 33211111 00 12357777666667899999999998874 222222221 1223332 2221 1246677888
Q ss_pred eecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeeccc-
Q psy8139 662 WSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPH- 740 (1101)
Q Consensus 662 W~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~- 740 (1101)
|...+. .+..+.+.|... |.++..- ... ........
T Consensus 242 C~~~g~--------------------------------~p~~~~v~W~k~----g~~l~~~-----~~~--~~~~~~~g~ 278 (327)
T 2wng_A 242 CQVRKF--------------------------------YPQRLQLTWLEN----GNVSRTE-----TAS--TVTENKDGT 278 (327)
T ss_dssp EEEEEE--------------------------------BSSCEEEEEEET----TEEEEEE-----ECC--SCEECTTSC
T ss_pred EEEccc--------------------------------cCCCcEEEEEEC----CeEccCc-----ccC--ceEECCCCc
Confidence 875310 112356788742 2222111 000 00000000
Q ss_pred ccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 741 MVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 741 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
......+.|....+.....|.|.|.|..|.
T Consensus 279 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~ 308 (327)
T 2wng_A 279 YNWMSWLLVNVSAHRDDVKLTCQVEHDGQP 308 (327)
T ss_dssp EEEEEEEEC-------CCEEEEEEEETTCC
T ss_pred EEEEEEEEEccccccCCCEEEEEEEeCCCC
Confidence 000134677777888889999999999985
No 156
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.64 E-value=2.8e-16 Score=163.13 Aligned_cols=172 Identities=18% Similarity=0.312 Sum_probs=133.1
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEee------------cCCcEEEEecCCeeEEEEeecCCCC
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIF------------SSRRQRIVTDNDISTLIIHQAALMD 519 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d 519 (1101)
++.+...|..+.+.+|+++.|.|.+.+.|.+.+.|++++..+. ...++.+.. ..|.|.++...|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~d 79 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTRED 79 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTTS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHHH
Confidence 4556667778889999999999999999999999999764321 122333322 489999999999
Q ss_pred CEEEEEEEEeCCCc--eEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEE-eecCCCeeEEEECCeecCCCCce-
Q psy8139 520 EGEIKCTATNRAGH--SITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSM-AGMPPPTARWLHNGEPLTSGGRY- 595 (1101)
Q Consensus 520 ~g~Y~C~a~n~~g~--~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~-~g~p~~~v~W~~~g~~l~~~~~~- 595 (1101)
+|.|+|.+.|..|. ......|.|..+|.+...+. ...+..|+.+.|.|.+ .+.|.+.+.|++++..+......
T Consensus 80 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~ 156 (209)
T 1nbq_A 80 TGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNI---PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKST 156 (209)
T ss_dssp CSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCC---BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSS
T ss_pred CcEEEEEEecCCCCccceEEEEEEEecCCcCCCccc---ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccc
Confidence 99999999998763 33467788888877654433 3367889999999997 89999999999999887654321
Q ss_pred ------EEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 596 ------EITHTDRYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 596 ------~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
..........|.|.++...|.|.|+|.|.|..|..
T Consensus 157 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 157 RAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp SSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred eeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 11122245689999999999999999999999987
No 157
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.64 E-value=5.3e-16 Score=159.93 Aligned_cols=175 Identities=20% Similarity=0.276 Sum_probs=133.1
Q ss_pred eecCceeEEccCCeEEEEEE-EeccCC-CeEEEEECCEEeec--CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 456 IRALHDTTALEDEKVEFTVQ-VEGIPT-PKVSWYKDGFEIFS--SRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~-~~g~p~-~~v~W~~~g~~~~~--~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
...+..+.+.+|+++.|.|. +.+.|. +.+.|++++..+.. ......... ...|.|.++...|+|.|+|.+.|..
T Consensus 12 ~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~~~~~~ 89 (201)
T 3s97_C 12 PEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQT--NGNLYIANVEASDKGNYSCFVSSPS 89 (201)
T ss_dssp SSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTT--TCCEEESSCCGGGCEEEEEEEEEGG
T ss_pred cCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcC--CCeEEECcCCcccCeEEEEEEEecC
Confidence 34457788999999999999 889998 99999999876642 222222222 3479999999999999999999977
Q ss_pred CceEEE---EEEeec-------cCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeec
Q psy8139 532 GHSITK---ARLRLE-------APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTD 601 (1101)
Q Consensus 532 g~~~~s---~~l~V~-------~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~ 601 (1101)
+..... ..+.+. .+|.+...+ ....+..|..+.|.|.+.+.|.+.+.|++++..+..... +. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~--~~--~ 162 (201)
T 3s97_C 90 ITKSVFSKFIPLIPIPERTTKPYPADIVVQF---KDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAE--IS--T 162 (201)
T ss_dssp GTEEEECCCEEEEEECCSSCCCEEEEEEEEC---CCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCE--EE--T
T ss_pred CCcchhhcccceeeccccccCCCCCceEecC---CceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCcee--ec--C
Confidence 665442 233332 233333222 245788899999999999999999999999987765422 22 2
Q ss_pred ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEe
Q psy8139 602 RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 602 ~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
....|.|.++...|.|.|+|.|.|..|....+..|.|.
T Consensus 163 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 163 SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 25689999999999999999999999998888888775
No 158
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.64 E-value=1.4e-15 Score=158.34 Aligned_cols=190 Identities=12% Similarity=0.100 Sum_probs=127.0
Q ss_pred CCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcc
Q psy8139 641 RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVL 720 (1101)
Q Consensus 641 ~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~ 720 (1101)
||.+|.++.+...+.+++.|+|++|..+. .+.++++.
T Consensus 4 P~~~P~~l~~~~~~~~si~l~W~~p~~~~-------------------------------------------~~~~~~i~ 40 (211)
T 3p4l_A 4 PMMPPVGVQASILSHDTIRITWADNSLPK-------------------------------------------HQKITDSR 40 (211)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECTTSCT-------------------------------------------TCCCCSSC
T ss_pred CCCCCCCEEEEecCCCeEEEEEeCCCCCc-------------------------------------------ccccCCCc
Confidence 55778888887777788888887664321 12345688
Q ss_pred eEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc--cc
Q psy8139 721 GYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR--AL 798 (1101)
Q Consensus 721 ~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~--~~ 798 (1101)
+|.|+|+..+...|..... ....++++|.+|.|++.|.|+|.|.|..|.|++|....+.+. +..|+.+|.++. ..
T Consensus 41 ~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~--~~~P~~~P~~~~~~~~ 117 (211)
T 3p4l_A 41 YYTVRWKTNIPANTKYKNA-NATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF--ELVPTSPPKDVTVVSK 117 (211)
T ss_dssp EEEEEEEECC---CCCEEE-EESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECC--CCCCCSCCEEEEEEEE
T ss_pred EEEEEEEECCCCcceEEEe-CCCceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecc--cCCCCCCCcceEEEec
Confidence 9999998876544433222 267789999999999999999999999999888765444433 367777887776 22
Q ss_pred --cccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCC--CCceeeeeccccccCCCCC
Q psy8139 799 --HDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDN--EDDYDIVETNEHTGTGAPS 874 (1101)
Q Consensus 799 --~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~--~~~~~~v~~~~~~~~~~~~ 874 (1101)
+++++.+.|.||... ++++. .|.|.|+..+... .|....+. +.....
T Consensus 118 ~~s~~sv~l~W~~p~~~------------~g~i~------------~Y~v~~~~~~~~~~~~~~~~~~~-----~~~~~~ 168 (211)
T 3p4l_A 118 EGKPKTIIVNWQPPSEA------------NGKIT------------GYIIYYSTDVNAEIHDWVIEPVV-----GNRLTH 168 (211)
T ss_dssp TTEEEEEEEEEECCTTC------------CSCCC------------EEEEEEESCTTSCGGGSEEEEEE-----SSCSEE
T ss_pred CCCCCEEEEEECCCCCC------------CCCEE------------EEEEEEEECCCCCCCceEEEEec-----CCeeEE
Confidence 256778899875433 34555 8888888665433 24333332 222233
Q ss_pred CCCCccCcccce--eeccccccc---CceeecccCC
Q psy8139 875 DNENESDYFPEK--TIDESVYGY---DTIVYGYDSD 905 (1101)
Q Consensus 875 ~l~~~~~~t~Y~--V~a~n~~G~---~~~v~~~t~e 905 (1101)
.+.+|.+.+.|. |+|.|..|. +..+...+.+
T Consensus 169 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 169 QIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 344455999999 999999997 6666655544
No 159
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.64 E-value=7.6e-16 Score=158.25 Aligned_cols=170 Identities=12% Similarity=0.041 Sum_probs=116.8
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.|...|.. .+.+|++++|.|.+.+.|. .+.|++++..+..... ..........|.|.++...|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 56777777764 7889999999999998876 9999999876532110 0011344568999999999999999999998
Q ss_pred CCceE--EEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCce-EEE-eecce
Q psy8139 531 AGHSI--TKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRY-EIT-HTDRY 603 (1101)
Q Consensus 531 ~g~~~--~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~-~~~-~~~~~ 603 (1101)
.|... ....|.|.. +|.+...+ ...+..|+.++|.|.+.+.| +.+.|+++|..+...... ... .....
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~----~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~ 155 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALP----SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQ 155 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC---------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEE
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccC----CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCce
Confidence 77543 346777766 34443332 13577899999999999998 999999999876432111 111 11235
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCC
Q psy8139 604 LNLRISDARRADRGEYQAHGVNSLG 628 (1101)
Q Consensus 604 ~sl~i~~l~~~~~y~y~c~A~N~~G 628 (1101)
..|.|.++...|.|.|+|.|.|..+
T Consensus 156 ~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 156 ALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEEECCCCBTTBCEEEEEEEEETTE
T ss_pred eEEEeeecCcccCeeEEEEEEccCC
Confidence 7899999999999999999999765
No 160
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.64 E-value=4.5e-15 Score=154.82 Aligned_cols=159 Identities=14% Similarity=0.128 Sum_probs=111.6
Q ss_pred CCcceEEEEEEeCCC-CCceeecc-----------cccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecC
Q psy8139 717 SPVLGYLVEHRRTGS-PYWVRASP-----------HMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTY 784 (1101)
Q Consensus 717 ~~i~~Y~V~~~~~~~-~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~ 784 (1101)
+++.+|.|+|+..+. ..|..+.. .....++++|.+|.|++.|.|+|.|.|..|.|.+|..+..+++..
T Consensus 30 ~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~ 109 (214)
T 2ibg_A 30 LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQP 109 (214)
T ss_dssp CCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCC
T ss_pred CCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEecc
Confidence 357778888777543 56765442 113567889999999999999999999999988887666554431
Q ss_pred --CCCCCCCCcccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCcee
Q psy8139 785 --QRSPAAAPSFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYD 860 (1101)
Q Consensus 785 --~~~P~~~p~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~ 860 (1101)
...|+.+|.++. ...++++.+.|.++.. ..++++. +|.|.|+..+....|...
T Consensus 110 ~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~-----------~~~~~i~------------~Y~v~~~~~~~~~~~~~~ 166 (214)
T 2ibg_A 110 GAALDPMPVPELLEIEEYSETAVVLHWSLASD-----------ADEHLIT------------GYYAYYRPSSSAGEYFKA 166 (214)
T ss_dssp STTSCCCCCCEECCCBCCSSSCEEEEEECCTT-----------CCGGGCC------------EEEEEEEETTCCSCCEEE
T ss_pred CcCCCCCCCCcccEEEEccCCeEEEEEeCCCc-----------cCCCCcc------------eEEEEEEECCCCcceEEe
Confidence 234555676665 4556678889987531 3345666 899999887765677766
Q ss_pred eeec---cccccCCCCCCCCCccCcccce--eeccccccc---CceeecccCC
Q psy8139 861 IVET---NEHTGTGAPSDNENESDYFPEK--TIDESVYGY---DTIVYGYDSD 905 (1101)
Q Consensus 861 ~v~~---~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~---~~~v~~~t~e 905 (1101)
.+.. ..+.+.+|. +.+.|. |+|.|..|. +..+...|.+
T Consensus 167 ~~~~~~~~~~~i~~L~-------p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 167 TIEGAHARSFKIAPLE-------TATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEECTTCCEEEECSCC-------TTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred eccCCcceEEEeCCCC-------CCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 5533 334444454 999999 999999997 6666666654
No 161
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.64 E-value=5.8e-15 Score=152.20 Aligned_cols=178 Identities=17% Similarity=0.141 Sum_probs=125.7
Q ss_pred CceeE-EccCCeEEEEEEEeccCCCeEEEEECC-EEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE
Q psy8139 459 LHDTT-ALEDEKVEFTVQVEGIPTPKVSWYKDG-FEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT 536 (1101)
Q Consensus 459 p~~~~-v~~g~~v~L~C~~~g~p~~~v~W~~~g-~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~ 536 (1101)
|.+.. +.+|++++|.|.+.|.|.|.+.|++.. .++. . .....+....|.|.++...|+|.|.|.|.|..|....
T Consensus 7 p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 7 PESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--G--KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp SSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--S--EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred CCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--c--eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 44444 459999999999999999999999843 1111 1 1222344557999999999999999999999888777
Q ss_pred EEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCC---CeeEEEECCeecCCCCceEE----EeecceEEEEEc
Q psy8139 537 KARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPP---PTARWLHNGEPLTSGGRYEI----THTDRYLNLRIS 609 (1101)
Q Consensus 537 s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~---~~v~W~~~g~~l~~~~~~~~----~~~~~~~sl~i~ 609 (1101)
.+.|.|..+|....... ...+..|+.++|.|.+.+.++ +.++|++++..+........ ........|.|.
T Consensus 83 ~~~l~V~~~p~~~~~~~---~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~ 159 (202)
T 1vca_A 83 GIQVEIYSFPKDPEIHL---SGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFT 159 (202)
T ss_dssp EEEEEEEBCCSCCEEEE---SSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEEC
T ss_pred EEEEEEEeCCCCCEeCC---ceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEE
Confidence 88899988765322111 135788999999999998643 47999999987643210000 001113456788
Q ss_pred cCCCCCCeEEEEEEEeCCCCc-------eeEEEEEEecCCC
Q psy8139 610 DARRADRGEYQAHGVNSLGED-------VASFLVTVTDRPL 643 (1101)
Q Consensus 610 ~l~~~~~y~y~c~A~N~~G~~-------~~s~~l~v~~~P~ 643 (1101)
.....+.|.|+|.|.|..|.. ..+..|.|..+|.
T Consensus 160 ~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 160 PVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 888888999999999998863 3456677776553
No 162
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.63 E-value=1.7e-15 Score=166.56 Aligned_cols=259 Identities=14% Similarity=0.153 Sum_probs=174.2
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.|...+.++.+.+|++++|.|.+.+. +.|++++. ........+..+.|.|.++...|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~-----~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPS-----PHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCC-----SSCEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCC-----CceEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 57888888888999999999999999884 89986543 2233334455679999999999999999999998
Q ss_pred CCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCC-CeeEEEEC-CeecCCCCceEEEeecceEEEEE
Q psy8139 531 AGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPP-PTARWLHN-GEPLTSGGRYEITHTDRYLNLRI 608 (1101)
Q Consensus 531 ~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~-~~v~W~~~-g~~l~~~~~~~~~~~~~~~sl~i 608 (1101)
.|.....+.|.|..+|..... ......+..|+.+.|.|.+.+.+. +.+.|+++ +..+..+..+.... ...|.|
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~--~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~---~~~L~i 148 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPARPWNV--LAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSP---WHGFTI 148 (292)
T ss_dssp ---CCEEECCEECCSSCCEEE--SCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCS---SSCCEE
T ss_pred CCCcceEEEEEEcCccccccc--cCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccC---CceEEE
Confidence 888888888888887753221 123457889999999999998332 78999987 55555544444332 334999
Q ss_pred ccCCCCCCeEEEEEEEeCCCCce-eEEEEEEecCCC-CCCccEE-----EEecCCeEEEEeecCCCCCCcccceeEEEEE
Q psy8139 609 SDARRADRGEYQAHGVNSLGEDV-ASFLVTVTDRPL-PPGKAKV-----VMTLGKSVTLSWSEPEDDGGCKIGNYIVEYF 681 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~~G~~~-~s~~l~v~~~P~-~P~~~~~-----~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~ 681 (1101)
.++...|.|.|+|.|.|..|... ....+.|...+. +| .+.. ....+..+.|.|.....
T Consensus 149 ~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p-~i~~~~~~~~~~~g~~v~l~C~~~~~-------------- 213 (292)
T 4dkd_C 149 HRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPP-ALTLVPAELVRIRGEAAQIVCSASSV-------------- 213 (292)
T ss_dssp TTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSC-EEEEESSCBCCCSSSCEEEEEEEEES--------------
T ss_pred CCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCC-eEEccCCceeEecCCCEEEEEEecCC--------------
Confidence 99999999999999999877653 377788876332 33 1111 11356678888875310
Q ss_pred cCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEE
Q psy8139 682 RPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFR 761 (1101)
Q Consensus 682 ~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 761 (1101)
+..+.+.|...... -.+... ..+. .........++|.++.......|.
T Consensus 214 -------------------~~~~~~~w~~~~~~--~~~~~~-~~~~----------~~~~~~~~~L~i~~v~~~d~G~Y~ 261 (292)
T 4dkd_C 214 -------------------DVNFDVFLQHNNTK--LAIPQQ-SDFH----------NNRYQKVLTLNLDQVDFQHAGNYS 261 (292)
T ss_dssp -------------------SSCCEEECCBSSCC--CCCCBE-EEEE----------TTEEEEEEEEEESSCCTTSCEEEE
T ss_pred -------------------CCceEEEEeCCCcc--cccCcc-ceec----------cceeeeEEEEEECccChhcCeEEE
Confidence 11234566532110 001000 0000 000012357899999999999999
Q ss_pred EEEEcCCcc
Q psy8139 762 ITAENVVGF 770 (1101)
Q Consensus 762 V~A~n~~G~ 770 (1101)
|.|.|..|.
T Consensus 262 C~a~N~~g~ 270 (292)
T 4dkd_C 262 CVASNVQGK 270 (292)
T ss_dssp EEEECSSCE
T ss_pred EEEecCCCC
Confidence 999999997
No 163
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.63 E-value=2.5e-15 Score=156.19 Aligned_cols=159 Identities=20% Similarity=0.252 Sum_probs=106.8
Q ss_pred EEEeeCCCCCCCCCcceEEEEEEeCCCCCceeeccc---ccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 705 TIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPH---MVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 705 ~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
.|+|++|..++|.+|.+|.|+|+..+...|...... ....++++|.+|.|++.|.|+|.|.|..|.|++|....+.+
T Consensus 25 ~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T 104 (209)
T 2vkw_A 25 QVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 104 (209)
T ss_dssp EEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred EEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccc
Confidence 333333434444568899999998887788765431 13457999999999999999999999999988876655443
Q ss_pred ecCCCCCCCCCcccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCce
Q psy8139 782 VTYQRSPAAAPSFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDY 859 (1101)
Q Consensus 782 ~~~~~~P~~~p~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~ 859 (1101)
.. ..+|.+|..+. ...++++.+.|.+|. ..++++. .|.|.|+. .+..|..
T Consensus 105 ~~--~~~P~~P~~~~~~~~~~~sv~l~W~~p~------------~~~~~i~------------~Y~v~~~~--~~~~~~~ 156 (209)
T 2vkw_A 105 QP--VREPSAPKLEGQMGEDGNSIKVNLIKQD------------DGGSPIR------------HYLVRYRA--LSSEWKP 156 (209)
T ss_dssp CC--SCSCCCCEEEEEECTTSSCEEEEEECCC------------CTTSCCC------------EEEEEEEE--TTSCCCC
T ss_pred cC--CCCCCCCcccccccccCCeEEEEEECcc------------cCCCCCc------------eEEEEEEC--CCCCCce
Confidence 32 32444555543 456678888998752 3345666 89998887 3444543
Q ss_pred eeeeccccccCCCCCCCCCccCcccce--eeccccccc
Q psy8139 860 DIVETNEHTGTGAPSDNENESDYFPEK--TIDESVYGY 895 (1101)
Q Consensus 860 ~~v~~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~ 895 (1101)
.... ........+.+|.+.+.|. |+|.|..|.
T Consensus 157 ~~~~----~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 190 (209)
T 2vkw_A 157 EIRL----PSGSDHVMLKSLDWNAEYEVYVVAENQQGK 190 (209)
T ss_dssp CEEE----CTTCCEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred eeec----CCCccEEEecCCCCCCEEEEEEEEEeCCcc
Confidence 2221 1111223344555999999 999999998
No 164
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.63 E-value=1.5e-15 Score=152.96 Aligned_cols=169 Identities=18% Similarity=0.182 Sum_probs=130.0
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCC-eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTP-KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
.+|.+...|..+.+.+|++++|.|.+.+.|.+ .+.|++++..+.. ....|.|.++...|+|.|+|.+.|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~----------~~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE----------TNSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC----------CSSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC----------CceEEEEeccceecCEEEEEEcCC
Confidence 56778888888899999999999999998886 6999999987753 234899999999999999999988
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEe-ecCCCeeEEEECCeecCCCCceEEEeecceEEEEE
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMA-GMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRI 608 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~-g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i 608 (1101)
..+. ....|.|..++.....+ ...+..|+.+.|.|.+. +.|.+.+.|+++|..+... .....|.|
T Consensus 73 ~~~s--~~~~l~V~~~~~~~~~~----~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i 138 (176)
T 1f2q_A 73 VNES--EPVYLEVFSDWLLLQAS----AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW--------YENHNISI 138 (176)
T ss_dssp SSCC--CCEEEEEECSSEEEEES----CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC--------CCSSEEEE
T ss_pred cccc--ccEEEEEeCcceeecCC----cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee--------cCCCeEEE
Confidence 6553 34566666544433222 23677899999999995 5667899999999887432 12568999
Q ss_pred ccCCCCCCeEEEEEEEeCCCC-ceeEEEEEEecCCC
Q psy8139 609 SDARRADRGEYQAHGVNSLGE-DVASFLVTVTDRPL 643 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~~G~-~~~s~~l~v~~~P~ 643 (1101)
.++...|.|.|+|.|.|..|. .+....+.|..+|.
T Consensus 139 ~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 139 TNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred CCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 999999999999999997443 44567888887764
No 165
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.63 E-value=4.6e-17 Score=190.34 Aligned_cols=251 Identities=12% Similarity=0.155 Sum_probs=155.8
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc-CCC-
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PTP- 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~- 482 (1101)
..+|.|.++++.|+|.|+|.|.|..+.. +....+.+......+|.+...+....+..|+.++|.|.+.|. |.+
T Consensus 77 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~-----~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~ 151 (434)
T 1igy_B 77 TANIHLSSLTSDDSAVYYCVREGEVPYW-----GQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPV 151 (434)
T ss_dssp BBCEEECSBCGGGCSEECCCCSSSSCCC-----CCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCC
T ss_pred EEEEEECCCChHHCEEEEEEEEcccccc-----CCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCe
Confidence 3579999999999999999998853321 122444444333345555433333345789999999999886 766
Q ss_pred eEEEEECCEEeecCCcEEEEecC---CeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeecc---------C---Cc
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDN---DISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEA---------P---PT 547 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~---~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~---------~---p~ 547 (1101)
.|+|++++..+...........+ ..+.|.|.++...| |.|+|.|.|..|.......+.+.. . |.
T Consensus 152 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~ 230 (434)
T 1igy_B 152 TVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSS 230 (434)
T ss_dssp EEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCC
T ss_pred EEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcE
Confidence 99999988643110000000011 12368999999888 999999999998865555544321 0 22
Q ss_pred c-ccCCCCCCCeEEeeCCEEEEEEEEeecC----CCeeEEEECCeecCCCCceEEE--ee---cceEEEEEccCCCCCCe
Q psy8139 548 I-RLPKQYEDGLLFEMGEIIKLKVSMAGMP----PPTARWLHNGEPLTSGGRYEIT--HT---DRYLNLRISDARRADRG 617 (1101)
Q Consensus 548 ~-~~~~~~~~~~~v~~g~~~~l~c~~~g~p----~~~v~W~~~g~~l~~~~~~~~~--~~---~~~~sl~i~~l~~~~~y 617 (1101)
+ ..+|... ..+..|+.+.|.|.+.|.+ .+.++|++++..+......... .. ...+.|.|.++...|.|
T Consensus 231 v~~~~p~~~--~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 308 (434)
T 1igy_B 231 VFIFPPKPK--DTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGK 308 (434)
T ss_dssp EEEECCCHH--HHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTC
T ss_pred EEEeCCChH--HhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCC
Confidence 2 1122100 0156799999999999884 4689999998776432111110 01 11356889999999999
Q ss_pred EEEEEEEeCCCCceeEEEEEE-ecCCCCCCccEEEE-----ecCCeEEEEeec
Q psy8139 618 EYQAHGVNSLGEDVASFLVTV-TDRPLPPGKAKVVM-----TLGKSVTLSWSE 664 (1101)
Q Consensus 618 ~y~c~A~N~~G~~~~s~~l~v-~~~P~~P~~~~~~~-----~~~~sv~lsW~~ 664 (1101)
.|+|.|.|..|.......+.+ ...+.+|. +.+.. ..+..++|.|..
T Consensus 309 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~-v~~~~~~~~~~~~~~~~L~C~~ 360 (434)
T 1igy_B 309 EFKCRVNSAAFPAPIEKTISKTKGKPRAPQ-VYTIPPPKEQMAKDKVSLTCMI 360 (434)
T ss_dssp CCBCCBCCSSCSSCCCCCCCCCCSCCBCCC-CEEECCCSSSSSSSEEEEEEEE
T ss_pred cEEEEEECCCCCCceeEEEeccCCCCcCCE-EEEECCCHHHhcCCcEEEEEEE
Confidence 999999999987533333322 12222332 22211 234568888874
No 166
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.62 E-value=3.4e-14 Score=169.15 Aligned_cols=314 Identities=11% Similarity=0.073 Sum_probs=174.0
Q ss_pred hhhhhhhcccccCcceEEEeeecccc----------c--ccccceeeeccCCCCCCCCCccc--C-CCC-CCCCCeeEEE
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITG----------L--NVGTDLYCVIKKPPGPPGKPQLL--P-DSP-SLDRDVFTIR 368 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G----------~--~~s~~~~~~v~~~p~~P~~p~~l--~-~~~-~~~~~sv~l~ 368 (1101)
.+.|.|.++..+|+|.|+|.+.+..| . ..+....+.|...+. ..|.+. . ... .+....++|.
T Consensus 79 ~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~--~~P~i~~~~~~~~~~~~~~~v~L~ 156 (512)
T 1zvo_C 79 QFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPT--KAPDVFPIISGCRHPKDNSPVVLA 156 (512)
T ss_pred EEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCC--cCCeEEeccCCcccccCCCeEEEE
Confidence 46799999999999999999976542 0 122334555543221 122211 0 000 1223567777
Q ss_pred EeCCCCCCCcCeeEEEEEEEecCCCc-eEE-----c-CccccccceEEEcCccCCccEEEEEEEEecCCCCCCCC-----
Q psy8139 369 WEPPEYDGGSPVLGYLVEHRRTGSPY-WVR-----A-SPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGP----- 436 (1101)
Q Consensus 369 W~~p~~~g~~~i~~Y~v~~~~~~~~~-w~~-----~-~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~----- 436 (1101)
|........ ++ .|.|...+... ... . +........|+|...... .|.|+|.|.|..|......
T Consensus 157 C~~~g~~P~-p~---~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~ 231 (512)
T 1zvo_C 157 CLITGYHPT-SV---TVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPE 231 (512)
T ss_pred EEEEeeecC-ce---EEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCC
Confidence 765411000 11 12222211110 000 0 000011134778777766 8999999999887643211
Q ss_pred -CCcceEEEeccC------------------------------------------------CCCCCee-eecCceeEEcc
Q psy8139 437 -LSEPLTVTYQRS------------------------------------------------PAAAPSF-IRALHDTTALE 466 (1101)
Q Consensus 437 -~s~~vtv~~~~~------------------------------------------------~~~~P~~-~~~p~~~~v~~ 466 (1101)
....+.+.+... ...+|.+ +..|....+..
T Consensus 232 ~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~ 311 (512)
T 1zvo_C 232 SPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWL 311 (512)
T ss_pred CCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhcc
Confidence 001112222110 1134444 33444445678
Q ss_pred CCeEEEEEEEeccCC--CeEEEEECCEEeecCCcE-EEE-ecCC----eeEEEEeecCCCCCEEEEEEEEeCCCceEEEE
Q psy8139 467 DEKVEFTVQVEGIPT--PKVSWYKDGFEIFSSRRQ-RIV-TDND----ISTLIIHQAALMDEGEIKCTATNRAGHSITKA 538 (1101)
Q Consensus 467 g~~v~L~C~~~g~p~--~~v~W~~~g~~~~~~~~~-~~~-~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~ 538 (1101)
|+.++|.|.+.|..+ ..|+|+++|..+...... ... ..++ .+.|.|......|.|.|+|.|.|..+... ..
T Consensus 312 g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~ 390 (512)
T 1zvo_C 312 RDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RL 390 (512)
T ss_pred CCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ce
Confidence 999999999988633 389999999875421100 011 1111 24688988888899999999999887654 22
Q ss_pred EEee------ccCCccccCCCCCCCeEEeeCCEEE-EEEEEeecCC--CeeEEEECCeecCCCCce--EEEee-cc----
Q psy8139 539 RLRL------EAPPTIRLPKQYEDGLLFEMGEIIK-LKVSMAGMPP--PTARWLHNGEPLTSGGRY--EITHT-DR---- 602 (1101)
Q Consensus 539 ~l~V------~~~p~~~~~~~~~~~~~v~~g~~~~-l~c~~~g~p~--~~v~W~~~g~~l~~~~~~--~~~~~-~~---- 602 (1101)
.+.. ..+|.+...+.. . .|+.+. |.|.+.|.++ ..+.|.++|.++..+... ..... ++
T Consensus 391 ~~~~~~~~~~~~~p~v~~~~~~----~--~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~ 464 (512)
T 1zvo_C 391 MALREPAAQAPVKLSLNLLASS----D--PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFW 464 (512)
T ss_pred eEEeecCCCCCCCCEEEEEccC----c--CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEE
Confidence 2221 233443222110 1 588889 9999998543 478999999988653211 11111 11
Q ss_pred -eEEEEEccCCCCCCeEEEEEEEeCCCCcee
Q psy8139 603 -YLNLRISDARRADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 603 -~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~ 632 (1101)
...|.|......+.|.|+|.|.|.......
T Consensus 465 ~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~ 495 (512)
T 1zvo_C 465 AWSVLRVPAPPSPQPATYTCVVSHEDSRTLL 495 (512)
T ss_pred EEEEEEECchhcCCCCeEEEEEEecCCCCce
Confidence 134556655556699999999998765433
No 167
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.62 E-value=1.8e-15 Score=155.81 Aligned_cols=172 Identities=12% Similarity=0.056 Sum_probs=121.3
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.|...|. ..+.+|++++|.|.+.+.|. .+.|+++|..+....... ........|.|.++...|+|.|+|.|.|
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 3 LPKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-QELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-HHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-ccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 35677777776 47899999999999998876 699999987663211100 0012234899999999999999999999
Q ss_pred CC-Cc--eEEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCc-eEEEe-ec
Q psy8139 530 RA-GH--SITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGR-YEITH-TD 601 (1101)
Q Consensus 530 ~~-g~--~~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~-~~~~~-~~ 601 (1101)
.. |. .+....|.|.. +|.+...+ ...+..|+.+.|.|.+.+. .+.+.|+++|..+..... +.... .+
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~~~----~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~ 154 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSAQP----SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGS 154 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEEES----CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------C
T ss_pred CCCCcccCCccEEEEEcccccCCccccCC----ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCc
Confidence 87 53 34456777776 33333222 2367889999999999988 789999999987643221 11111 22
Q ss_pred ceEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 602 RYLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 602 ~~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
....|.|.++...|.|.|+|.|.|..+.
T Consensus 155 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~~ 182 (198)
T 1ugn_A 155 SRAIFSVGPVSPSRRWWYRCYAYDSNSP 182 (198)
T ss_dssp CEEEEEECCCCTTSCEEEEEEEECTTST
T ss_pred ceeEEEecccCcccCeEEEEEEEeCCCC
Confidence 3578999999999999999999998763
No 168
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.62 E-value=3e-15 Score=156.26 Aligned_cols=181 Identities=15% Similarity=0.110 Sum_probs=129.0
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCee--EEEEeecCCCCCEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDIS--TLIIHQAALMDEGEIKCTA 527 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~--~l~I~~l~~~d~g~Y~C~a 527 (1101)
..+|.+...|. ..+.+|++++|.|.+.+ +.+.+.|+++|..+..... ......... .|.|.++...|+|.|+|.|
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 46777877776 57899999999999987 6789999998765432211 111112233 8999999999999999999
Q ss_pred EeCCCceEE--EEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecc
Q psy8139 528 TNRAGHSIT--KARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDR 602 (1101)
Q Consensus 528 ~n~~g~~~~--s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~ 602 (1101)
.|..|.... ...|.|.. +|.+...+ ...+..|+.++|.|...+.+.+.+.|+++|..+... ......
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p----~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----~~~~~~ 155 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGLYGKPFLSADR----GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----HQSGEH 155 (218)
T ss_dssp EETTTEEEECCCEEEEEECSSCCCEEEESS----CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----EEECSS
T ss_pred EcCCCceeecCCEEEEEcCcccCCEEEeCC----CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----ccCCCc
Confidence 998764333 35667764 34443332 236789999999997777888999999999877542 112334
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCC-----ceeEEEEEEecC
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGE-----DVASFLVTVTDR 641 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~-----~~~s~~l~v~~~ 641 (1101)
...|.|.++...|.|.|+|.|.|..+. .+....|.|.+.
T Consensus 156 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 156 PANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp SEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred cCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 678999999999999999999986432 233456666654
No 169
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.62 E-value=3.3e-15 Score=155.01 Aligned_cols=174 Identities=20% Similarity=0.310 Sum_probs=128.3
Q ss_pred CceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeec-------------------CCcEEEEecCCeeEEEEeecCCCC
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFS-------------------SRRQRIVTDNDISTLIIHQAALMD 519 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~-------------------~~~~~~~~~~~~~~l~I~~l~~~d 519 (1101)
|....+.+|++++|.|...+.|.+.+.|++++..... ..++.+.. + .+|.|.++...|
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~-~--~~L~i~~v~~~D 82 (208)
T 3r4d_A 6 AVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS-N--GSLLFQMITMKD 82 (208)
T ss_dssp EESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT-T--SCEEECSCCGGG
T ss_pred CccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEec-C--CeEEEccccccC
Confidence 3446788999999999988889999999987532111 12222221 1 279999999999
Q ss_pred CEEEEEEEEeCC-CceEEEEEEeeccCC---ccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCce
Q psy8139 520 EGEIKCTATNRA-GHSITKARLRLEAPP---TIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRY 595 (1101)
Q Consensus 520 ~g~Y~C~a~n~~-g~~~~s~~l~V~~~p---~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~ 595 (1101)
+|.|+|.+.+.. +.......|.|..++ .+...+. . +..|..+.|.|.+.+.| +.+.|+++|..+..+.++
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~---~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~ 156 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNT---T--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERM 156 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCS---S--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSE
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCc---e--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCe
Confidence 999999999985 445556778887653 3322211 1 67799999999999976 899999999999877666
Q ss_pred EEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCcee-EEEEEEecCCC
Q psy8139 596 EITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVA-SFLVTVTDRPL 643 (1101)
Q Consensus 596 ~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~-s~~l~v~~~P~ 643 (1101)
.+.. ...+|.|.++...|.|.|+|.|.|..|...+ ...+.|..+|.
T Consensus 157 ~~~~--~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 157 TLSQ--NNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp EEET--TTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred EEcC--CCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 5543 2478999999999999999999999997543 55666655443
No 170
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.62 E-value=5.5e-15 Score=154.19 Aligned_cols=78 Identities=18% Similarity=0.266 Sum_probs=58.3
Q ss_pred EEEEeeCCCCCCCCCcceEEEEEEeCCC-CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 704 FTIRWEPPEYDGGSPVLGYLVEHRRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 704 i~l~W~pP~~~~~~~i~~Y~V~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
+.|+|.+|..++++++.+|.|+|+..+. ..|..+.......++++|.+|.|++.|.|+|.|.|..|.|++|......|
T Consensus 132 v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 210 (214)
T 2ibg_A 132 VVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRT 210 (214)
T ss_dssp EEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEEC
T ss_pred EEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEe
Confidence 3333333333345568899999988776 67877655434578999999999999999999999999998877655444
No 171
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.62 E-value=2.6e-14 Score=154.63 Aligned_cols=191 Identities=13% Similarity=0.158 Sum_probs=137.4
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEec-cCCC--eEEEEECCEEeecCCcEEEEecCCeeEEEEeec---CCCCCEE-
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEG-IPTP--KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQA---ALMDEGE- 522 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g-~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l---~~~d~g~- 522 (1101)
+.+|.+... ..+.+|++++|.|.+.| .|.+ .++|+++|..+.. .+...+. .+.+..+ ...|+|.
T Consensus 4 ~~~p~~~~~---~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g 74 (265)
T 2oz4_A 4 ATPPQLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQ 74 (265)
T ss_dssp SSCCEEECC---SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEE
T ss_pred CCCCccccC---ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcc
Confidence 455655432 36889999999999998 7777 9999999988754 2333333 5555555 7778775
Q ss_pred -EEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeec
Q psy8139 523 -IKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTD 601 (1101)
Q Consensus 523 -Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~ 601 (1101)
|+|.|.|..|....++.|.|...|.....+ ....+..|+.+.|.|.+. |.+.+.| +|..+... +
T Consensus 75 ~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~---~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~--------~ 139 (265)
T 2oz4_A 75 RLTCAVILGNQSQETLQTVTIYSFPAPNVIL---TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL--------G 139 (265)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCCCEEEE---SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC--------S
T ss_pred eEEEEEecCCCCcEEEEEEEEeCCCCceeec---CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC--------C
Confidence 999999999988888899997643322111 233677899999999998 8999999 77766322 2
Q ss_pred ceEEEEEccCCCCCCeEEEEEEEeCC-CCce---eEEEEEEecCCCCCCc---cEEEEecCCeEEEEeec
Q psy8139 602 RYLNLRISDARRADRGEYQAHGVNSL-GEDV---ASFLVTVTDRPLPPGK---AKVVMTLGKSVTLSWSE 664 (1101)
Q Consensus 602 ~~~sl~i~~l~~~~~y~y~c~A~N~~-G~~~---~s~~l~v~~~P~~P~~---~~~~~~~~~sv~lsW~~ 664 (1101)
....|.|..+...+.|.|+|.|.|.. |... ....+.|..+|..... .......+..++|.|..
T Consensus 140 ~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~ 209 (265)
T 2oz4_A 140 PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQA 209 (265)
T ss_dssp SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCC
T ss_pred CcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeEC
Confidence 24568888999999999999998644 7654 5667777766644221 13444568888888874
No 172
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.62 E-value=3.4e-15 Score=167.51 Aligned_cols=257 Identities=15% Similarity=0.188 Sum_probs=169.6
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEecc----CCCeEEEEECC--EE-------------e--ecCCcEEEE-ecCCeeE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGI----PTPKVSWYKDG--FE-------------I--FSSRRQRIV-TDNDIST 509 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~----p~~~v~W~~~g--~~-------------~--~~~~~~~~~-~~~~~~~ 509 (1101)
++.++..|.++.+.+|++++|.|.+.+. +.+.+.|++++ .. + ....++.+. ...+..+
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 3445566778899999999999999876 55579999943 21 1 112333332 1223457
Q ss_pred EEEeecCCCCCEEEEEE-EEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeC---CEEEEEEE-EeecCCCeeEEEE
Q psy8139 510 LIIHQAALMDEGEIKCT-ATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMG---EIIKLKVS-MAGMPPPTARWLH 584 (1101)
Q Consensus 510 l~I~~l~~~d~g~Y~C~-a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g---~~~~l~c~-~~g~p~~~v~W~~ 584 (1101)
|.|.++...|+|.|+|. +.+..|.....+.|.|..+|.+..... ...+.+..| +.+.|.|. ..+.|.+.+.|++
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~-~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~ 172 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGT-QAVLRAKKGQDDKVLVATCTSANGKPPSVVSWET 172 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEEC-SSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecC-CCceeecCCCccceEEEEEEecCCcCCceEEEEc
Confidence 99999999999999998 566677777788999998887633221 234567777 78999997 8899999999998
Q ss_pred CCeecC-------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCC----CCccEEEEe
Q psy8139 585 NGEPLT-------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLP----PGKAKVVMT 653 (1101)
Q Consensus 585 ~g~~l~-------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~----P~~~~~~~~ 653 (1101)
++.... ....+.+ ...|.|..+...|.|.|+|.|.|..|..+.+..|.|..+|.. +.. ....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~--~~~~ 245 (331)
T 3u83_A 173 RLKGEAEYQEIRNPNGTVTV-----ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDG--NWYL 245 (331)
T ss_dssp SSCCEEEEEEEECTTSCEEE-----EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCS--CCBT
T ss_pred CCCCccccceeECCCCcEEE-----EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCC--ceEe
Confidence 532211 1111111 356889999999999999999999988777777777655421 111 1123
Q ss_pred cCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCC
Q psy8139 654 LGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY 733 (1101)
Q Consensus 654 ~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~ 733 (1101)
.+.++.|+|...+.+ ....+.|.... .++.. .
T Consensus 246 ~g~~~~l~C~~~g~p---------------------------------~p~~i~W~~~~----~~~~~-----------~ 277 (331)
T 3u83_A 246 QRMDVKLTCKADANP---------------------------------PATEYHWTTLN----GSLPK-----------G 277 (331)
T ss_dssp TCCCEEEEEEEEEES---------------------------------CCCEEEEEETT----BSCCT-----------T
T ss_pred CCCeEEEEEeCcCCC---------------------------------CCCEEEEEECC----Ccccc-----------c
Confidence 457788888752211 11136775421 11100 0
Q ss_pred ceeecccccCccEEEEc-CCCCCceEEEEEEEEcCCcc
Q psy8139 734 WVRASPHMVEDTELMVS-GLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 734 ~~~~~~~~~~~~~~~i~-~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
.. .....+.|. ++.......|.|.|.|..|.
T Consensus 278 -~~-----~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~ 309 (331)
T 3u83_A 278 -VE-----AQNRTLFFKGPINYSLAGTYICEATNPIGT 309 (331)
T ss_dssp -EE-----EETTEEEECSCCCGGGCEEEEEEEEETTEE
T ss_pred -ce-----ecCcEEEEeCCCccccCeEEEEEEEecccc
Confidence 00 133578888 89999999999999999997
No 173
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.62 E-value=4.9e-16 Score=173.01 Aligned_cols=262 Identities=16% Similarity=0.177 Sum_probs=170.8
Q ss_pred eeEEccCCeEEEEEEEeccC-CCeEEEEECCEEee----cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE
Q psy8139 461 DTTALEDEKVEFTVQVEGIP-TPKVSWYKDGFEIF----SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI 535 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~g~p-~~~v~W~~~g~~~~----~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~ 535 (1101)
.+.+.+|+++.|.|.+.+.| .+.+.|++++..+. ...++.. .++ .|.|.++...|+|.|+|.|.|..|...
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQ--HKE--KLWFVPAKVEDSGHYYCVVRNSSYCLR 89 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEE--CSS--BEECTTCCGGGCSCCEECCCSSSCCCC
T ss_pred EEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEec--cCC--eEEECCCChhhCEEEEEEEeCCceEEE
Confidence 56788999999999999888 78999999985432 1222222 222 799999999999999999999988766
Q ss_pred EEEEEeec-cCCccccCCCCCCCeEEeeCCEEEEEEEE------eecCCCeeEEEECCeecCCCCceEEEeecceEEEEE
Q psy8139 536 TKARLRLE-APPTIRLPKQYEDGLLFEMGEIIKLKVSM------AGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRI 608 (1101)
Q Consensus 536 ~s~~l~V~-~~p~~~~~~~~~~~~~v~~g~~~~l~c~~------~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i 608 (1101)
....+.+. .+|.+...+.......+..|+.+.|.|.+ .|.|.+.+.|++++..+..+.... .. ....|.|
T Consensus 90 ~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~-~~--~~~~L~i 166 (315)
T 1itb_B 90 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF-SG--VKDRLIV 166 (315)
T ss_dssp EECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSE-EE--ETTEEEE
T ss_pred EEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceE-ee--cCceEEE
Confidence 65555543 34544333322223467789999999998 889999999999999986533221 11 2458999
Q ss_pred ccCCCCCCeEEEEEEE-eCCCCce---eEEEEEEecC--CCCCC-----ccEEEEecCCeEEEEeecCCCCCCcccceeE
Q psy8139 609 SDARRADRGEYQAHGV-NSLGEDV---ASFLVTVTDR--PLPPG-----KAKVVMTLGKSVTLSWSEPEDDGGCKIGNYI 677 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~-N~~G~~~---~s~~l~v~~~--P~~P~-----~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~ 677 (1101)
.++...|.|.|+|.|. |..|... ....+.+... +.+|. .-.+....+..+.|.|...+.+.
T Consensus 167 ~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~-------- 238 (315)
T 1itb_B 167 MNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLS-------- 238 (315)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTT--------
T ss_pred EeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCC--------
Confidence 9999999999999999 7888763 2333433321 22331 11234556778899998632111
Q ss_pred EEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCC---CCCCCc-ceEEEEEEeCCCCCceeecccccCccEEEEcCCC
Q psy8139 678 VEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEY---DGGSPV-LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLE 753 (1101)
Q Consensus 678 v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~---~~~~~i-~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 753 (1101)
..+.|..... ..+..+ ..|. ....... .........++|.++.
T Consensus 239 --------------------------p~i~W~~~g~~i~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~L~i~~v~ 285 (315)
T 1itb_B 239 --------------------------DIAYWKWNGSVIDEDDPVLGEDYY---SVENPAN----KRRSTLITVLNISEIE 285 (315)
T ss_dssp --------------------------SEEEEEETTEECCTTCSSEEEEEE---EECCSSC----GGGEEEEEEEEESSCC
T ss_pred --------------------------CeeEEEECCEECCcccccccccce---eeeccCC----CceeEEEEEEEEeecC
Confidence 1356764210 111000 1111 0000000 0000123478999999
Q ss_pred CCc-eEEEEEEEEcCCcc
Q psy8139 754 PGW-RYQFRITAENVVGF 770 (1101)
Q Consensus 754 p~t-~Y~~~V~A~n~~G~ 770 (1101)
... ...|.|.|.|..|.
T Consensus 286 ~~d~~G~Y~C~a~N~~G~ 303 (315)
T 1itb_B 286 SRFYKHPFTCFAKNTHGI 303 (315)
T ss_dssp GGGGTSCEEEEEECTTCC
T ss_pred HHHcCCceEEEEecCCCc
Confidence 998 99999999999996
No 174
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.61 E-value=3.5e-15 Score=169.43 Aligned_cols=280 Identities=13% Similarity=-0.039 Sum_probs=144.1
Q ss_pred CCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEec-CCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcc
Q psy8139 614 ADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTL-GKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQL 692 (1101)
Q Consensus 614 ~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~-~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~ 692 (1101)
...|.+++.+.|..|.+..+. ..+ .|.||.++.+.... .+++.|+|++|.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~~v--~~~pP~nl~v~~~~~~~~v~LsW~p~~~~------------------------ 59 (380)
T 3lb6_C 7 AVGCLYTFLISTTFGCTSSSD-TEI--KVNPPQDFEIVDPGYLGYLYLQWQPPLSL------------------------ 59 (380)
T ss_dssp ---------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC-------------------------
T ss_pred ehhhhhhheeecccccccCCc-ccc--cCCcCCceEEEecCcCceEEEEECCCCCc------------------------
Confidence 466888888998888653221 112 48899999988665 57788888876421
Q ss_pred cCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcC----C
Q psy8139 693 LPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENV----V 768 (1101)
Q Consensus 693 ~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~----~ 768 (1101)
+..++.+..|.|.|+..++..|..+... ... ...++..++.|+|+|+|.|. .
T Consensus 60 --------------------~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--~~~--~~~~~~l~~~y~~rV~a~~~~~~~~ 115 (380)
T 3lb6_C 60 --------------------DHFKECTVEYELKYRNIGSETWKTIITK--NLH--YKDGFDLNKGIEAXIHTLLPWQCTN 115 (380)
T ss_dssp -------------------------CCCEEEEEEEETTCSSCEEEEES--SSE--EEEECCTTSCEEEEEEEECCHHHHS
T ss_pred --------------------cccccceEEEEEEECCCCCCcceEEEec--cEE--EEEeecCCCceEEEEEeecCCcccC
Confidence 0122457899999999887789887653 222 23355669999999999976 7
Q ss_pred ccCCCCCCCCcEEec-CCCCCCCCCcccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEE
Q psy8139 769 GFSEPGPLSEPLTVT-YQRSPAAAPSFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETI 845 (1101)
Q Consensus 769 G~g~~S~~s~~~t~~-~~~~P~~~p~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~ 845 (1101)
|.|.+|+++..++.. .++.|+.+|.++. ....+.+...|.|+... +... .|.
T Consensus 116 g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~p~~~~-------------~~~~------------~Y~ 170 (380)
T 3lb6_C 116 GSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGV-------------LLDT------------NYN 170 (380)
T ss_dssp SSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEECC-------------------C------------CEE
T ss_pred CccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEcCCCCC-------------CCCc------------cEE
Confidence 888888888777754 4578899999887 44556677889774321 2334 788
Q ss_pred eeeeccCCCC--CCceeeeec-----cccccCCCCCCCCCccCcccce--eeccccccc--CceeecccCCCCccCCCCC
Q psy8139 846 SSFRDKYVDN--EDDYDIVET-----NEHTGTGAPSDNENESDYFPEK--TIDESVYGY--DTIVYGYDSDDLDRHYPTL 914 (1101)
Q Consensus 846 v~~r~~~~~~--~~~~~~v~~-----~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~--~~~v~~~t~e~~P~~~P~~ 914 (1101)
+.|+..+.+. ++....... -.+...+ +..++.|. |.|.|..|. +..+...+.+.++..||.+
T Consensus 171 l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~-------~~~~~~Y~i~V~a~n~~G~~~s~~~~~~~~~~v~p~pP~~ 243 (380)
T 3lb6_C 171 LFYWYEGLDHALQCVDYIKADGQNIGCRFPYLE-------ASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPLPPVY 243 (380)
T ss_dssp EEEECTTCSSCEECSEEEEC--CEEEEECCCCT-------TCSSSCEEEEEEEC-----CCCEEEEECGGGSCCCCCCEE
T ss_pred EEEEECCCCccccCCCccccCCceEEEEeCCCc-------ccceeEEEEEEEEEcCCeeeccccEEEcHHHcccCCCCce
Confidence 8887655322 122111110 1111222 34788898 999999887 4444444445577889999
Q ss_pred Chhhhhhhhhhhccc-cccccc-cchhhcccccchhhhhhcccccccccccccCCceeEeecC-CCCCCCceeec
Q psy8139 915 DEEEEEEDRESLVKD-RESSVK-GKEEEAKVIKDDEYYENLGDVLTKKYSLPVNSDIQIKIDK-PDDEPDYVIKG 986 (1101)
Q Consensus 915 v~~~~~~~n~t~v~v-p~~~~n-G~i~gY~I~~~~~~y~~~~~~~~~~~~l~~~~~~~~~i~~-~~~~~~~~~~~ 986 (1101)
+++.....++..+.| +|...+ +.+.+|.| .|+..++. ...... .. ..+|.+ +.+++.|.+..
T Consensus 244 l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev-----~y~~~~~~-w~~~~~--~~--~~~l~~~L~p~t~Y~~qV 308 (380)
T 3lb6_C 244 LTFTRESSCEIKLKWSIPLGPIPARCFDYEI-----EIREDDTT-LVTATV--EN--ETYTLKTTNETRQLCFVV 308 (380)
T ss_dssp EEEC-------CEEEECCSSSCCSTTEEEEE-----CC---------CCEE--SS--SCC------------CCE
T ss_pred EEEEEcCCCeEEEEECCCCCCCCcceEEEEE-----EEEeCCCC-ceEecc--cc--eEEEeCccCCCcEEEEEE
Confidence 999876323444455 444444 58899999 88875432 222111 12 356788 99999999888
No 175
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.61 E-value=1.6e-15 Score=154.14 Aligned_cols=164 Identities=12% Similarity=0.109 Sum_probs=125.7
Q ss_pred eeEEccCCeEEEEEEEeccCCCeEEEEECCEE--eec------------CCcEEEEe---cCCeeEEEEeecCCCCCEEE
Q psy8139 461 DTTALEDEKVEFTVQVEGIPTPKVSWYKDGFE--IFS------------SRRQRIVT---DNDISTLIIHQAALMDEGEI 523 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~--~~~------------~~~~~~~~---~~~~~~l~I~~l~~~d~g~Y 523 (1101)
.+.+..|++++|.|.+.+.|.+.+.|++++.. +.. ..++.... ..+..+|.|.++...|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 35688999999999999999999999998752 211 11222221 22345699999999999999
Q ss_pred EEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecce
Q psy8139 524 KCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRY 603 (1101)
Q Consensus 524 ~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 603 (1101)
+|.+.|..| .+.|.|...+ .++ ...+..|+.+.|.|.+.+.|.+.+.|++++..+. ...
T Consensus 84 ~C~~~~~~~----~~~l~V~~~~---~~~----~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~----------~~~ 142 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGLT---ANS----DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI----------QGG 142 (184)
T ss_dssp EEEETTEEE----EEEEEEEEEE---ESS----CSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE----------EES
T ss_pred EEEEEcCCC----cEEEEEEEec---CCC----CceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc----------cCc
Confidence 999988654 4455555322 111 2267889999999999999999999999875441 125
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCC
Q psy8139 604 LNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPP 645 (1101)
Q Consensus 604 ~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P 645 (1101)
..|.|.++...|.|.|+|.|.|..|.......+.|.+.|.+|
T Consensus 143 ~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~ 184 (184)
T 2ny1_B 143 KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 184 (184)
T ss_dssp SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC--
T ss_pred eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCCC
Confidence 689999999999999999999999988899999999888654
No 176
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.61 E-value=3.6e-15 Score=151.42 Aligned_cols=160 Identities=15% Similarity=0.093 Sum_probs=120.3
Q ss_pred CCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 449 PAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 449 ~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
...+|.+...|.. .+.+|++++|.|.+.+ |.+.+.|+++|... . .....|.|.++...|+|.|+|.|.
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~--~~~~~L~i~~v~~~D~G~Y~C~a~ 72 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------Y--QDQAVLFIPAMKRSLAGRYRCSYQ 72 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------E--ESSSEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------c--CcccEEEECcCChhhCceEEEEEE
Confidence 3467888777764 7899999999999988 77899999987541 1 122389999999999999999999
Q ss_pred eCCCce--EEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecce
Q psy8139 529 NRAGHS--ITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRY 603 (1101)
Q Consensus 529 n~~g~~--~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 603 (1101)
|..|.. +....|.|.. +|.+...+. ..+..|+.+.|.|.+.+.+ +.+.|+++|..+..... .....
T Consensus 73 n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~----~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~----~~~~~ 143 (184)
T 2gi7_A 73 NGSLWSLPSDQLELVATGVFAKPSLSAQPG----PAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNP----ERWYR 143 (184)
T ss_dssp ETTEEBCCCCCEEEEEESSSCCCEEEEECC----CSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCC----CEEEE
T ss_pred cCCCccCCCCCEEEEecCcCCCCEEEeCCC----ceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceec----CCCce
Confidence 987643 2345666643 344433221 2456799999999987654 69999999987764221 11235
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 604 LNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 604 ~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
..|.|.++...|.|.|+|.|.|..+.
T Consensus 144 ~~L~i~~v~~~D~G~Y~C~a~n~~~~ 169 (184)
T 2gi7_A 144 ASFPIITVTAAHSGTYRCYSFSSRDP 169 (184)
T ss_dssp ESSSEEEETTCCSEEEEEEEECTTST
T ss_pred EEEEEccCCccCCeEEEEEEEeCCCC
Confidence 67899999999999999999998653
No 177
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.61 E-value=1.2e-14 Score=159.31 Aligned_cols=248 Identities=16% Similarity=0.106 Sum_probs=146.7
Q ss_pred eEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEe
Q psy8139 462 TTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLR 541 (1101)
Q Consensus 462 ~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~ 541 (1101)
..+..|++++|.|.+...+ .|.|.++|..... ..+ ++|+|.++...|+|.|+|.+ .|.....+.|.
T Consensus 16 ~~~~~G~~v~l~C~~~~~~--~i~W~~~~~~~~~-------~~~--~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~ 81 (306)
T 3d85_D 16 YPDAPGEMVVLTCDTPEED--GITWTLDQSSEVL-------GSG--KTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLL 81 (306)
T ss_dssp CSSCCCEEEEEECSSSCCS--SCEEEETTCCCCC-------EES--SEEEEEECSGGGCEEEEEEE---TTEEEEEEEEE
T ss_pred ccCccCCcEEEECCCCCCC--cCEEEECCccccC-------CCC--CEEEEEecCcCCCceEEEee---CCcccceEEEE
Confidence 3456899999999887433 7999999874321 122 38999999999999999999 35555566666
Q ss_pred eccCC------ccccCCCCCCCeEEeeCCEEEEEEEEeecC-CCeeEEEECCeecCCCCceEEEe-------------ec
Q psy8139 542 LEAPP------TIRLPKQYEDGLLFEMGEIIKLKVSMAGMP-PPTARWLHNGEPLTSGGRYEITH-------------TD 601 (1101)
Q Consensus 542 V~~~p------~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p-~~~v~W~~~g~~l~~~~~~~~~~-------------~~ 601 (1101)
|..++ .+...+..+ ++ ...|.|.....+ ..+++|.+++..... ..+.... ..
T Consensus 82 v~~~~~~~~~t~i~~~~~~p------p~-~~~lsC~~~~~~~~~~C~W~pg~~~~l~-~~~~~~r~~~~~~~~~C~~~~~ 153 (306)
T 3d85_D 82 LHKKEDGIWSTDILKDQKEP------KN-KTFLRCEAKNYSGRFTCWWLTTISTDLT-FSVKSSRGSSDPQGVTCGAATL 153 (306)
T ss_dssp EEEEETTEECCCSSCCCC---------C-CCCCEEEBSSSSSEEEEEEEESCCSSEE-EEEEEEECSSSCEEEEECCCEE
T ss_pred EEeccCCcceeeeecccCCC------CC-CCcceEEcCCcccCcEEEecCCCCCcee-EEEEEEecCCCCcceECCCCCC
Confidence 55321 111111000 01 124566655554 556666654431000 0000000 00
Q ss_pred ceEEEE-------------EccCCC----CCCeEEEEEEEeCCCCceeEEEEEE--ecCCCCCCccEEEEecC-CeEEEE
Q psy8139 602 RYLNLR-------------ISDARR----ADRGEYQAHGVNSLGEDVASFLVTV--TDRPLPPGKAKVVMTLG-KSVTLS 661 (1101)
Q Consensus 602 ~~~sl~-------------i~~l~~----~~~y~y~c~A~N~~G~~~~s~~l~v--~~~P~~P~~~~~~~~~~-~sv~ls 661 (1101)
....+. +..+-+ ...|.|+|.|.|..|..+....+.+ ...|+||.++.+..... ..+.|+
T Consensus 154 ~~~~c~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vs 233 (306)
T 3d85_D 154 SAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVS 233 (306)
T ss_dssp EEEEEC--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC----CEEEE
T ss_pred CccceeecCccccceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCCCcEEEE
Confidence 011111 122222 2478999999999997665544433 25799999988876433 677888
Q ss_pred eecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccc
Q psy8139 662 WSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHM 741 (1101)
Q Consensus 662 W~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~ 741 (1101)
|++|...+. | .+.-.+.|.|+|+..+...|.....
T Consensus 234 W~~P~~~~~----------------------------------------p---~~~~~L~Y~vryr~~~~~~~~~~~~-- 268 (306)
T 3d85_D 234 WEYPDTWST----------------------------------------P---HSYFSLTFCVQVQGKSKREKKDRVF-- 268 (306)
T ss_dssp EECCTTSCS----------------------------------------C---TTTSCEEEEEEEECC------CEEE--
T ss_pred EcCCCCCcC----------------------------------------C---CceeeEEEEEEEEECCCCccEEEee--
Confidence 886642111 1 1112368999999887766655433
Q ss_pred cCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCc
Q psy8139 742 VEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEP 779 (1101)
Q Consensus 742 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~ 779 (1101)
...+++.|. +++.|.|+|+|.|..|.|.||++|..
T Consensus 269 ~~~ts~~l~---~~~~Y~vqVRa~~~~~~G~WSeWS~~ 303 (306)
T 3d85_D 269 TDKTSATVI---CRKNASISVRAQDRYYSSSWSEWASV 303 (306)
T ss_dssp ESSSEEEEC---CCSSCEEEEEEEESSSCCCCCCCEEE
T ss_pred ccccEEEEe---CCCeEEEEEEeccCCCCCCCCCCCCC
Confidence 556777774 69999999999999999999988854
No 178
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.61 E-value=2.4e-15 Score=169.73 Aligned_cols=216 Identities=12% Similarity=0.158 Sum_probs=136.2
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc-CC-C
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PT-P 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~-~ 482 (1101)
..+|.|.++++.|+|.|+|.|.|..+.. +....+.+...+..+|.+...+....+..|+.++|.|.+.|. |. +
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~n~~~~~-----~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 152 (344)
T 1za6_B 78 TAYVELSSLRSEDTAVYFCTRSLNMAYW-----GQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 152 (344)
T ss_dssp EEEEEECSCCGGGCEEEEEEETTTTCEE-----CCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCC
T ss_pred EEEEEECCCCcccCEEEEEEEecCccee-----cCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCe
Confidence 3579999999999999999998843221 122455555444456666544444456799999999999987 54 6
Q ss_pred eEEEEECCEEeecCCcEEEEecCC----eeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEee----------------
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDND----ISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRL---------------- 542 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V---------------- 542 (1101)
.|+|++++..+...........++ .+.|.|.++...| |.|+|.|.|..|.......+.+
T Consensus 153 ~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 231 (344)
T 1za6_B 153 TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGS 231 (344)
T ss_dssp CEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC-------------
T ss_pred EEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCc
Confidence 999999986532100000011111 2378898888877 9999999999886544333321
Q ss_pred --------ccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-C-CCeeEEEECCeecCCCCceEEEeecc-----eEEEE
Q psy8139 543 --------EAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-P-PPTARWLHNGEPLTSGGRYEITHTDR-----YLNLR 607 (1101)
Q Consensus 543 --------~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p-~~~v~W~~~g~~l~~~~~~~~~~~~~-----~~sl~ 607 (1101)
..+|.+...+... ....|..+.|.|.+.|. | .+.++|.++|..+...........++ ...+.
T Consensus 232 ~l~~~~~~~~~P~v~~~~~~~---~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~ 308 (344)
T 1za6_B 232 SGGGSGGQPREPQVYTLPPSR---DELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLT 308 (344)
T ss_dssp -------CCBCCEEEEECCCG---GGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEE
T ss_pred cccccCCCCcCCEEEEeCCCh---HhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEE
Confidence 2234332211110 01235669999999985 4 46899999998876432211111111 23455
Q ss_pred EccCCCCCCeEEEEEEEeCCCC
Q psy8139 608 ISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 608 i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
|......+.|.|+|.|.|....
T Consensus 309 i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 309 VDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp ECHHHHHTTCEEEEEEECTTST
T ss_pred EChHHccCCCeEEEEEEcCCCC
Confidence 5555556699999999997654
No 179
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.60 E-value=2.2e-14 Score=151.00 Aligned_cols=177 Identities=14% Similarity=0.139 Sum_probs=117.5
Q ss_pred ceeEEccCCeEEEEEEEeccCCC---eEEEEECCEE-----------eec------CCcEEEEe---cCCeeEEEEeecC
Q psy8139 460 HDTTALEDEKVEFTVQVEGIPTP---KVSWYKDGFE-----------IFS------SRRQRIVT---DNDISTLIIHQAA 516 (1101)
Q Consensus 460 ~~~~v~~g~~v~L~C~~~g~p~~---~v~W~~~g~~-----------~~~------~~~~~~~~---~~~~~~l~I~~l~ 516 (1101)
..+.+..|++++|.|.+.+.+.+ .|.|++++.. +.. ..+..... ..+..+|.|.++.
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34678899999999999876655 6999986531 111 11222222 1245689999999
Q ss_pred CCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCCeeEEEECCee-cCCCCc
Q psy8139 517 LMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPPTARWLHNGEP-LTSGGR 594 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~~v~W~~~g~~-l~~~~~ 594 (1101)
..|+|.|+|.|.|..|.......+.+..++.. . .....+..|..+.+.|.+.| .|.|.++|++++.. +.....
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~--~---~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~ 166 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAALGSD--L---HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEA 166 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCCC--C---EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEEC
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeeccceec--c---cceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCce
Confidence 99999999999998877665554444333222 1 12346778999999999998 59999999986544 332222
Q ss_pred eEEEee-cceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC
Q psy8139 595 YEITHT-DRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDR 641 (1101)
Q Consensus 595 ~~~~~~-~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~ 641 (1101)
...... +....+.+..+...|.|.|+|.|.|..|.......+.|.++
T Consensus 167 ~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 167 PVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred EEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 112211 11223344467788999999999999999888888887653
No 180
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.60 E-value=1.6e-15 Score=176.81 Aligned_cols=224 Identities=17% Similarity=0.123 Sum_probs=135.3
Q ss_pred CCCCCeEEEEEEEeCCCCceeE-EEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCC
Q psy8139 612 RRADRGEYQAHGVNSLGEDVAS-FLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKP 690 (1101)
Q Consensus 612 ~~~~~y~y~c~A~N~~G~~~~s-~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p 690 (1101)
...+.|.|.|.+.|..|..... .......+|++|.++. ..++.+++.|+|++|.+.+|.++.+|.|+|.......+
T Consensus 303 ~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~-- 379 (536)
T 3fl7_A 303 LPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESG-- 379 (536)
T ss_dssp ECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CC--
T ss_pred CCCCCCccEEEEeccccccCCCccccccccCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCC--
Confidence 3457799999999998865432 2233456888888885 46778888888888776666555555555532210000
Q ss_pred cccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc
Q psy8139 691 QLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF 770 (1101)
Q Consensus 691 ~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 770 (1101)
.|.+. .+...|.. .......++++|.+|.|++.|.|+|.|.|..|.
T Consensus 380 ----------------~~~~c-----------------~~~~~~~~-~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~ 425 (536)
T 3fl7_A 380 ----------------ECGPC-----------------EASVRYSE-PPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSG 425 (536)
T ss_dssp ----------------CEEEC-----------------CTTCEESS-CSSSBCSSEEEEECCCTTCEEEEEEEEECTTGG
T ss_pred ----------------ccccc-----------------CCCceEEE-eecCCccceeEeCCCCCCCEEEEEEEEEecCCC
Confidence 01100 00011111 112246789999999999999999999999998
Q ss_pred CCCCCCCCcEEecCCCCCCCCCcccccccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeec
Q psy8139 771 SEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRD 850 (1101)
Q Consensus 771 g~~S~~s~~~t~~~~~~P~~~p~~~~~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~ 850 (1101)
+.+++.+..++..+...+|..|.. ....++++.+.|.||.. .++++. .|.|.|+.
T Consensus 426 ~sps~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV~LsW~pP~~------------~ng~I~------------~Y~V~y~~ 480 (536)
T 3fl7_A 426 LVTSRSFRTASVSINQTEPPKVRL-EGRSTTSLSVSWSIPPP------------QQSRVW------------KYEVTYRK 480 (536)
T ss_dssp GCSCCCEEEEEEECCSCCCCEEEE-EECCC-CCEEEEECCTT------------TTTTCS------------EEEEEEEE
T ss_pred CCCCCccceeEEeecccCCCCCce-eeccCCeEEEEEECCcC------------CCCccc------------EEEEEEEE
Confidence 554445555555432333333322 35566778889987533 345566 89998987
Q ss_pred cCCCCCCceeeeeccccccCCCCCCCCCccCcccce--eeccccccc---CceeecccC
Q psy8139 851 KYVDNEDDYDIVETNEHTGTGAPSDNENESDYFPEK--TIDESVYGY---DTIVYGYDS 904 (1101)
Q Consensus 851 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~---~~~v~~~t~ 904 (1101)
.+....+.........+.+.+|. +.+.|. |+|.|..|. |..+...|.
T Consensus 481 ~~~~~~~~~v~~~~ts~~l~gL~-------P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~ 532 (536)
T 3fl7_A 481 KGDSNSYNVRRTEGFSVTLDDLA-------PDTTYLVQVQALTQEGQGAGSKVHEFQTL 532 (536)
T ss_dssp C--CCCCEEEEESSSEEECCSCC-------SSCEEEEEEEEECC---CEECCCEEEECC
T ss_pred CCCCceEEEEcCCCCEEEECCCC-------CCCEEEEEEEEEcCCcccCCCCCEEEEeC
Confidence 76542233333333445555555 999999 999999997 566666554
No 181
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=149.03 Aligned_cols=175 Identities=26% Similarity=0.323 Sum_probs=125.4
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
++|.+|.++.+...+.+++.|+|++|.. +++.++
T Consensus 4 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~----------------------------------------------~~~~~i 37 (197)
T 3lpw_A 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLL----------------------------------------------DGGSKI 37 (197)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSC----------------------------------------------CTTSCC
T ss_pred CCCCCCCCcEEEEecCCEEEEEEcCCcc----------------------------------------------CCCCcc
Confidence 5677888877777777777777776543 344467
Q ss_pred ceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc--c
Q psy8139 720 LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR--A 797 (1101)
Q Consensus 720 ~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~--~ 797 (1101)
.+|.|+|+..+...|...... ...+++++.+|.|++.|.|+|.|.|..|.|.++......+.. .++.+|.++. .
T Consensus 38 ~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~---~~p~~p~~~~~~~ 113 (197)
T 3lpw_A 38 KNYIVEKRESTRKAYSTVATN-CHKTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKAS---ERPLPPGKITLMD 113 (197)
T ss_dssp CEEEEEEEETTCSSCEEEEEE-ECSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESC---CCCCCCSCEEEEE
T ss_pred cEEEEEEEECCCCccEEeecC-CCccEEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecC---CCCCCCcccEEEe
Confidence 888888888877777766432 577899999999999999999999999999888766666654 3445665554 4
Q ss_pred ccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceee-eeccccccCCCCCCC
Q psy8139 798 LHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDI-VETNEHTGTGAPSDN 876 (1101)
Q Consensus 798 ~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~-v~~~~~~~~~~~~~l 876 (1101)
...+++.+.|.+|... .++++. .|.|.|+..+ ...|.... .....+.+.+|.
T Consensus 114 ~~~~~v~l~W~~p~~~-----------~~~~i~------------~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~L~--- 166 (197)
T 3lpw_A 114 VTRNSVSLSWEKPEHD-----------GGSRIL------------GYIVEMQTKG-SDKWATCATVKVTEATITGLI--- 166 (197)
T ss_dssp ECSSCEEEEECCCSCC-----------TTSCCC------------EEEEEEEETT-CSCCEEEEEESSSEEEECCCC---
T ss_pred ccCCeEEEEecCCCcC-----------CCCccc------------EEEEEEEeCC-CCceEEeecccccEEEeCCcC---
Confidence 5567788899875432 223556 8999888765 33454432 222444555555
Q ss_pred CCccCcccce--eeccccccc
Q psy8139 877 ENESDYFPEK--TIDESVYGY 895 (1101)
Q Consensus 877 ~~~~~~t~Y~--V~a~n~~G~ 895 (1101)
+.+.|. |+|.|..|.
T Consensus 167 ----p~t~Y~~~V~A~n~~G~ 183 (197)
T 3lpw_A 167 ----QGEEYSFRVSAQNEKGI 183 (197)
T ss_dssp ----TTCEEEEEEEEEETTEE
T ss_pred ----CCCEEEEEEEEEeCCcc
Confidence 999999 999999997
No 182
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.60 E-value=2.9e-15 Score=150.73 Aligned_cols=156 Identities=13% Similarity=0.114 Sum_probs=116.1
Q ss_pred eeEEccCCeEEEEEEEec--cCCCeEEEEECCEEee----------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 461 DTTALEDEKVEFTVQVEG--IPTPKVSWYKDGFEIF----------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~g--~p~~~v~W~~~g~~~~----------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.+.+.+|++++|.|...+ .|.+.|.|++++..+. ...++.+..++ +|.|.++...|+|.|+|.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS---CEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC---cEEEcccccccCEEEEEEEE
Confidence 356789999999995433 5567899999997553 23455553222 59999999999999999999
Q ss_pred eCCCce--EEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEE
Q psy8139 529 NRAGHS--ITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNL 606 (1101)
Q Consensus 529 n~~g~~--~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl 606 (1101)
|..|.. .....|.|..++.. | .....+..+.|.|.+.|.|.|.+.|+++|.++..+.. +
T Consensus 82 n~~g~~~~~~~~~l~V~~~~~~---p-----~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~ 142 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMVSK---P-----MIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------K 142 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCCCC---C-----EEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------S
T ss_pred eCCCCEEEEEEEEEEEeCCCCC---C-----EEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------E
Confidence 999986 55567777764321 1 1223345689999999999999999999987754332 3
Q ss_pred EEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 607 RISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 607 ~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
.|.++...|.|.|+|.|.|..|.......+.+
T Consensus 143 ~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 143 TMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 34467789999999999999998777665543
No 183
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.60 E-value=1.9e-14 Score=146.62 Aligned_cols=165 Identities=14% Similarity=0.101 Sum_probs=121.7
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.+...|.. .+..|++++|.|.+.+. .+.+.|+++|..+..... ..........|.|.++...|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECC-SSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCccccccc-ccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 46777777776 78999999999998764 468999999987642110 0011234568999999999999999999987
Q ss_pred CCce--EEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEE
Q psy8139 531 AGHS--ITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLN 605 (1101)
Q Consensus 531 ~g~~--~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~s 605 (1101)
.|.. +....|.|.. +|.+...+ ...+..|+.++|.|.+.+ +.+.+.|+++|..+.. ..........
T Consensus 80 ~~~~~~s~~~~l~V~~~~~~p~i~~~p----~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~ 150 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEMYDTPTLSVHP----GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAE 150 (188)
T ss_dssp TEECCCCCCEEEEEESCSCCCEEEEES----CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE----EEEECSSEEE
T ss_pred CCCCCCCCceEEEecccCCCCeEEECC----CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc----cccCCCceeE
Confidence 6543 3346677764 44443322 236789999999999876 4579999999876643 1123345788
Q ss_pred EEEccCCCCCCeEEEEEEEeCC
Q psy8139 606 LRISDARRADRGEYQAHGVNSL 627 (1101)
Q Consensus 606 l~i~~l~~~~~y~y~c~A~N~~ 627 (1101)
|.|.+++..|.|.|+|.|.|..
T Consensus 151 L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 151 FPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEEECCGGGCEEEEEECEEET
T ss_pred EEECCCCcCCCcEEEEEEEcCC
Confidence 9999999999999999999875
No 184
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.59 E-value=3.4e-15 Score=159.92 Aligned_cols=172 Identities=14% Similarity=0.128 Sum_probs=122.5
Q ss_pred cCceeEEccCCeEEEEEEEec---cCCCeEEEEECCEEee------------------------------cCCcEEEEec
Q psy8139 458 ALHDTTALEDEKVEFTVQVEG---IPTPKVSWYKDGFEIF------------------------------SSRRQRIVTD 504 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g---~p~~~v~W~~~g~~~~------------------------------~~~~~~~~~~ 504 (1101)
.+..+.+.+|++++|.|.+.+ .|.+.+.|++++.... ...+..+..
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~- 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN- 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-
Confidence 445778999999999999988 8888999999864320 011222111
Q ss_pred CCeeEEEEeecCCCCCEEEEEEEEeCCCce-----EEEEEEeeccCCccccCC-CCCCCeEEeeCCEEEEEEEEeecCCC
Q psy8139 505 NDISTLIIHQAALMDEGEIKCTATNRAGHS-----ITKARLRLEAPPTIRLPK-QYEDGLLFEMGEIIKLKVSMAGMPPP 578 (1101)
Q Consensus 505 ~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~-----~~s~~l~V~~~p~~~~~~-~~~~~~~v~~g~~~~l~c~~~g~p~~ 578 (1101)
.+...|.|.++...|+|.|+|.+.|..+.. ...+.|.|..++..+... .....+.+..|..+.|.|.+.+.|.|
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 123479999999999999999999987753 346778887753221111 11223456679999999999999999
Q ss_pred eeEEEECCeecCCCCce--EEE-------------------eecceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 579 TARWLHNGEPLTSGGRY--EIT-------------------HTDRYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 579 ~v~W~~~g~~l~~~~~~--~~~-------------------~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
.+.|++++..+...... ... .......|.|.++...|.|.|+|.|.|..|..
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGEL 239 (250)
T ss_dssp EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGG
T ss_pred eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCcccc
Confidence 99999998877542211 000 00123689999999999999999999977643
No 185
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.59 E-value=1.7e-14 Score=144.21 Aligned_cols=164 Identities=18% Similarity=0.239 Sum_probs=126.4
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccC-CCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIP-TPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p-~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
.+|.+...|....+..|+++.|.|.+.+.| .+.+.|+++|..+.... ..+.+.++...|+|.|+|.+.|
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT----------QPSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC----------SSEEEEECCGGGCEEEEEEETT
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc----------cceEEEecccccCeEEEEEEeC
Confidence 356677778888899999999999999987 57899999998876431 2467789999999999999987
Q ss_pred CCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEe-ecCCCeeEEEECCeecCCCCceEEEeecceEEEEE
Q psy8139 530 RAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMA-GMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRI 608 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~-g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i 608 (1101)
..+ .....|.|..++....++. ..+..|+.+.|.|.+. +.|.+.+.|+++|..+.. ......|.|
T Consensus 73 ~~~--s~~~~l~v~~~~~~~~~~~----~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~--------~~~~~~L~i 138 (170)
T 3ry4_A 73 TSL--SDPVHLTVLFEWLVLQTPH----LEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF--------SHLDPTFSI 138 (170)
T ss_dssp SBC--CCCEEEEEECCSEEEECSC----SEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE--------ESSCCEEEE
T ss_pred CCc--eEeEEEEEECCceEecCCC----ceeecCCeEEEEEECCCCCCCceEEEEECCeEccc--------cCCCCeEEE
Confidence 543 3356777777665443332 3677899999999995 556799999999877542 223567999
Q ss_pred ccCCCCCCeEEEEEEEeCCCC-ceeEEEEEE
Q psy8139 609 SDARRADRGEYQAHGVNSLGE-DVASFLVTV 638 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~~G~-~~~s~~l~v 638 (1101)
.++...|.|.|+|.|.|..|. .+....+.|
T Consensus 139 ~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 139 PQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999999999999886 333444444
No 186
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.59 E-value=2.8e-14 Score=149.61 Aligned_cols=180 Identities=12% Similarity=0.138 Sum_probs=124.7
Q ss_pred CceeEEccCCeEEEEEEEeccCC-----CeEEEEECCEEeec---------------CCcEEEEec---CCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPT-----PKVSWYKDGFEIFS---------------SRRQRIVTD---NDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~-----~~v~W~~~g~~~~~---------------~~~~~~~~~---~~~~~l~I~~l 515 (1101)
+..+.+..|+++.|.|.+.+.|. +.+.|++++..+.. ..+..+... .+..+|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 45567889999999999987774 48999997643321 123333221 24568999999
Q ss_pred CCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEEC-CeecCCCCc
Q psy8139 516 ALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHN-GEPLTSGGR 594 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~-g~~l~~~~~ 594 (1101)
...|+|.|+|.+.| .|.....+.|.|..++....... ...+..|..+.|.|.+.|.|.|.+.|+++ +..+.....
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~---~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~ 163 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRI---LVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTT 163 (222)
T ss_dssp CGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEE---EEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEE
T ss_pred ccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCcee---eeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccc
Confidence 99999999999999 66666678888887664321110 11456799999999999999999999998 555543222
Q ss_pred eEEEeec--ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCC
Q psy8139 595 YEITHTD--RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRP 642 (1101)
Q Consensus 595 ~~~~~~~--~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P 642 (1101)
....... ......+..+...|.|.|+|.|.|..|.......+.|...|
T Consensus 164 ~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 164 TTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELP 213 (222)
T ss_dssp EEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-
T ss_pred eEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCc
Confidence 2111111 11112222445688999999999999999888888887554
No 187
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.59 E-value=1.1e-14 Score=152.02 Aligned_cols=182 Identities=19% Similarity=0.271 Sum_probs=126.7
Q ss_pred CCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEe-------------ecceEEEEEccC-CCCCCeEEEEEEEeCCC
Q psy8139 563 GEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITH-------------TDRYLNLRISDA-RRADRGEYQAHGVNSLG 628 (1101)
Q Consensus 563 g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-------------~~~~~sl~i~~l-~~~~~y~y~c~A~N~~G 628 (1101)
+.+..|.|...+.....++|........ ...|.+.. .....++.|.+| .+.+.|.|+|.|.|..|
T Consensus 9 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~-~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G 87 (215)
T 1bqu_A 9 EKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALG 87 (215)
T ss_dssp CCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTE
T ss_pred CCCEeeEeEECCCCcEEEEcCCCCCCCC-CceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEEEeccc
Confidence 4456678888777788889986432211 12333322 122367899999 89999999999999999
Q ss_pred CceeE-EEEEEe--cCCCCCCccEEEEe--cCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCce
Q psy8139 629 EDVAS-FLVTVT--DRPLPPGKAKVVMT--LGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDV 703 (1101)
Q Consensus 629 ~~~~s-~~l~v~--~~P~~P~~~~~~~~--~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~s 703 (1101)
.+... ..+... .+|.+|.++.+... +.+++.|+|++|.
T Consensus 88 ~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~------------------------------------- 130 (215)
T 1bqu_A 88 KVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPS------------------------------------- 130 (215)
T ss_dssp EEECCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCG-------------------------------------
T ss_pred CccCCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCC-------------------------------------
Confidence 87531 222111 35778877766543 4556666666543
Q ss_pred EEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecc--cccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 704 FTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASP--HMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 704 i~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
.. ++.+.+|.|+|+..++..|..+.. .....++++|.+|.|++.|.|+|+|.|..|.|++|+++..+.
T Consensus 131 ---------~~-~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~ 200 (215)
T 1bqu_A 131 ---------IK-SVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEAS 200 (215)
T ss_dssp ---------GG-GTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEE
T ss_pred ---------CC-CcceEEEEEEEccCCCCCceEeccccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccc
Confidence 22 246889999999988778887643 136678999999999999999999999999999998888766
Q ss_pred ec-CCCCCCCCC
Q psy8139 782 VT-YQRSPAAAP 792 (1101)
Q Consensus 782 ~~-~~~~P~~~p 792 (1101)
.. .++.|..+|
T Consensus 201 ~~T~~~~P~~~p 212 (215)
T 1bqu_A 201 GITYEDRPSKEP 212 (215)
T ss_dssp EEECCCHHHHHH
T ss_pred ccccccCCcCCC
Confidence 54 334444444
No 188
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.58 E-value=1.5e-14 Score=172.61 Aligned_cols=98 Identities=32% Similarity=0.572 Sum_probs=86.6
Q ss_pred eccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccE
Q psy8139 340 VIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRY 419 (1101)
Q Consensus 340 ~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y 419 (1101)
....+|+||+.|.+ .+++.++|+|+|.+|.++||++|++|.|+++..++..|..+.. ...+.+++.||.++..|
T Consensus 5 ~~~~~P~pP~~P~v----~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~--~~~t~~~V~~L~~g~~Y 78 (573)
T 3uto_A 5 ADVPEPEPPRFPII----ENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAK--SRYTYTTIEGLRAGKQY 78 (573)
T ss_dssp ---CCCCCCEEEEE----EEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEE--ESSSEEEECCCCTTCEE
T ss_pred ccCCCCccCCCCEE----EEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEecc--ccCCEEEeCCCCCCCcE
Confidence 34557899999988 4888999999999999999999999999999999999998864 35688999999999999
Q ss_pred EEEEEEEecCCCCCCCCCCcceEE
Q psy8139 420 QFRITAENVVGFSEPGPLSEPLTV 443 (1101)
Q Consensus 420 ~y~c~A~n~~G~~~~s~~s~~vtv 443 (1101)
.|||.|.|..|.|.+|..+.++.+
T Consensus 79 ~FRV~A~N~~G~s~PS~~s~~v~~ 102 (573)
T 3uto_A 79 EFRIIAENKHGQSKPCEPTAPVLI 102 (573)
T ss_dssp EEEEEEEETTEECCCCCCCCCEEC
T ss_pred eEEEEEEcCceEcCCcCCCCCEEc
Confidence 999999999999999988887765
No 189
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.58 E-value=1.2e-14 Score=151.46 Aligned_cols=173 Identities=15% Similarity=0.204 Sum_probs=124.0
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEEC--CEE---ee---------cCCcEEEEecCCeeEEEEeecCCCCC
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GFE---IF---------SSRRQRIVTDNDISTLIIHQAALMDE 520 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~---~~---------~~~~~~~~~~~~~~~l~I~~l~~~d~ 520 (1101)
+...| .+.+.+|++++|.|.+.+.|.+.+.|++. +.. +. ...++.+....+..+|.|.++...|+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDE 82 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhC
Confidence 44455 77899999999999999999999999982 211 11 22456655566777999999999999
Q ss_pred EEEEEEEEeCCC---ceEEEEEEeec----cCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCeecCC
Q psy8139 521 GEIKCTATNRAG---HSITKARLRLE----APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGEPLTS 591 (1101)
Q Consensus 521 g~Y~C~a~n~~g---~~~~s~~l~V~----~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~~l~~ 591 (1101)
|.|.|.|.|..| .....+.|.|. .+|.+...+.. ..+..|+.+.|.|.+.|. |. +.+.|+++|..+..
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~---~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 83 ADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPS---SEELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp EEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCC---HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCC---cccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 999999999988 33445677887 45544332211 122369999999999985 33 49999999998864
Q ss_pred CCceE--EEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 592 GGRYE--ITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 592 ~~~~~--~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
+.... ....+ ..+.|.|.++...|.|.|+|.|.|..|...
T Consensus 160 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3mj8_L 160 GVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVE 204 (213)
T ss_dssp TEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEE
T ss_pred CcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEE
Confidence 31110 00110 135688999999999999999999886543
No 190
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.58 E-value=1.1e-12 Score=156.19 Aligned_cols=226 Identities=14% Similarity=0.118 Sum_probs=137.1
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCC-----C---CCCCCCcceEEEeccCCCCCCeeee-cCceeEEccCCeEEEEEE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGF-----S---EPGPLSEPLTVTYQRSPAAAPSFIR-ALHDTTALEDEKVEFTVQ 475 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~-----~---~~s~~s~~vtv~~~~~~~~~P~~~~-~p~~~~v~~g~~v~L~C~ 475 (1101)
..+|.|.++++.|+|.|.|.+.+..|. + ..........+.+...+..+|.+.. .+.......|+.++|.|.
T Consensus 79 ~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~ 158 (512)
T 1zvo_C 79 QFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACL 158 (512)
T ss_pred EEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEE
Confidence 468999999999999999999886530 0 0001122345555433345565542 222211234689999999
Q ss_pred Eecc-CCC-eEEEEECCEEeecCCcEEEEecCC----eeEEEEeecCCCCCEEEEEEEEeCCCceEEEE-----------
Q psy8139 476 VEGI-PTP-KVSWYKDGFEIFSSRRQRIVTDND----ISTLIIHQAALMDEGEIKCTATNRAGHSITKA----------- 538 (1101)
Q Consensus 476 ~~g~-p~~-~v~W~~~g~~~~~~~~~~~~~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~----------- 538 (1101)
+.|. |.+ .|+|++++..............++ .+.|+|...... .|.|+|.|.|..|......
T Consensus 159 ~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~ 237 (512)
T 1zvo_C 159 ITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQA 237 (512)
T ss_pred EEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCC
Confidence 9887 665 899999654321000000111111 235788777766 8999999999988765443
Q ss_pred EEeeccCCcc----------------------------------------------ccCCC----CCCCeEEeeCCEEEE
Q psy8139 539 RLRLEAPPTI----------------------------------------------RLPKQ----YEDGLLFEMGEIIKL 568 (1101)
Q Consensus 539 ~l~V~~~p~~----------------------------------------------~~~~~----~~~~~~v~~g~~~~l 568 (1101)
.+.+..+|.+ ..+|. .+....+..|+.+.|
T Consensus 238 ~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L 317 (512)
T 1zvo_C 238 SSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATF 317 (512)
T ss_pred EEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEE
Confidence 2344333320 00000 001112446999999
Q ss_pred EEEEeecCC--CeeEEEECCeecCCCCce-EEE--eec---ceEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 569 KVSMAGMPP--PTARWLHNGEPLTSGGRY-EIT--HTD---RYLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 569 ~c~~~g~p~--~~v~W~~~g~~l~~~~~~-~~~--~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
.|.+.|..+ ..|+|+++|..+..+... ... ..+ ..+.|.|......+.|.|+|.|.|..+...
T Consensus 318 ~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~ 388 (512)
T 1zvo_C 318 TCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ 388 (512)
T ss_pred EEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC
Confidence 999998633 499999999876521110 011 111 135688888888899999999999987654
No 191
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.58 E-value=2.6e-15 Score=166.55 Aligned_cols=226 Identities=11% Similarity=0.039 Sum_probs=140.6
Q ss_pred hhhhhhhcccccCcceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEE
Q psy8139 305 QAKKTADNQFENQAPLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYL 384 (1101)
Q Consensus 305 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~ 384 (1101)
.+.|.|.++...|+|.|.|.|.|..+...+....+.+...|.++........ .......+.+.|.... +.|...
T Consensus 73 ~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~l~C~~~~---g~P~~~-- 146 (308)
T 4fom_A 73 DATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSL-IDGGNETVAAICIAAT---GKPVAH-- 146 (308)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCC-CTTCSCEEEEEEEEEE---EBSCCE--
T ss_pred ceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeecccccccccccee-EEcCCceEEEEEEecC---CcCCce--
Confidence 3569999999999999999997764444444455555444432211110000 1223445555554320 111111
Q ss_pred EEEEecCCCc---eEE-cCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecC-
Q psy8139 385 VEHRRTGSPY---WVR-ASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRAL- 459 (1101)
Q Consensus 385 v~~~~~~~~~---w~~-~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p- 459 (1101)
+.|...+... ... ..........|.|..+...|.|.|+|.|.|..|....+ ..+.+.+ ..+|.+...+
T Consensus 147 i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~---~~~~l~V----~~~P~~~~~~~ 219 (308)
T 4fom_A 147 IDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIR---YSFILDI----QYAPEVSVTGY 219 (308)
T ss_dssp EEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE---EEEECCC----CEEEEECCBCC
T ss_pred EEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceE---EeEEEEE----ecCCeeEEccc
Confidence 1221111110 000 00011112468999999999999999999987765322 2223222 3456554433
Q ss_pred ceeEEccCCeEEEEEEEeccCCC-eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEE
Q psy8139 460 HDTTALEDEKVEFTVQVEGIPTP-KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKA 538 (1101)
Q Consensus 460 ~~~~v~~g~~v~L~C~~~g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~ 538 (1101)
....+..|++++|.|.+.|.|.| .+.|++++..+..... ..+...+.|.++...|+|.|+|.|.|..|....++
T Consensus 220 ~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~ 294 (308)
T 4fom_A 220 DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQK 294 (308)
T ss_dssp CSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB-----CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEE
T ss_pred ceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE-----EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEE
Confidence 44567788999999999999998 6999998876654321 12234677899999999999999999999999999
Q ss_pred EEeeccCCcc
Q psy8139 539 RLRLEAPPTI 548 (1101)
Q Consensus 539 ~l~V~~~p~~ 548 (1101)
.|.|..+|..
T Consensus 295 ~l~V~~~P~~ 304 (308)
T 4fom_A 295 VIYISDPPHH 304 (308)
T ss_dssp ECCEECCC--
T ss_pred EEEEEcCCCC
Confidence 9999988853
No 192
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.57 E-value=1.3e-14 Score=151.30 Aligned_cols=174 Identities=11% Similarity=0.121 Sum_probs=124.8
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--EEe------------ecCCcEEEEecCCeeEEEEeecCCCCC
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--FEI------------FSSRRQRIVTDNDISTLIIHQAALMDE 520 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~~~------------~~~~~~~~~~~~~~~~l~I~~l~~~d~ 520 (1101)
+...|..+.+..|+++.|.|.+.+.|.+.+.|++++ ..+ ....++.+...++..+|.|.++...|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 345577888999999999999999998999999842 111 112466666566677999999999999
Q ss_pred EEEEEEEEeCCCceEE-EEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEEECCeecCCCCc
Q psy8139 521 GEIKCTATNRAGHSIT-KARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWLHNGEPLTSGGR 594 (1101)
Q Consensus 521 g~Y~C~a~n~~g~~~~-s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~~g~~l~~~~~ 594 (1101)
|.|+|.|.|..|.... .+.|.|.. +|.+...+.. ..+..|+.+.|.|.+.| .|.+ .+.|+++|..+..+..
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~---~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 160 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPS---SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 160 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC---HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred EEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCC---hhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceee
Confidence 9999999998775433 34677765 4444321111 11235889999999988 5654 8999999998765411
Q ss_pred eE--EEeec-----ceEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 595 YE--ITHTD-----RYLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 595 ~~--~~~~~-----~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
.. ..... ..+.|.|.++...|.|.|+|.|.|......
T Consensus 161 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 161 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred ecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 11 11111 135899999999999999999999876643
No 193
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.57 E-value=4.6e-15 Score=165.71 Aligned_cols=212 Identities=15% Similarity=0.142 Sum_probs=136.3
Q ss_pred eEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEe-ccCCCCCC-eeeecCceeEEccCCeEEEEEEEecc-CCC-
Q psy8139 407 ELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTY-QRSPAAAP-SFIRALHDTTALEDEKVEFTVQVEGI-PTP- 482 (1101)
Q Consensus 407 ~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~-~~~~~~~P-~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~- 482 (1101)
.|.|......|.|.|+|.|.|..|... ..+.. ......+| .+...|....+..|++++|.|.+.|. |.+
T Consensus 73 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~-------~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~ 145 (323)
T 2wqr_A 73 ELTLSQKHWLSDRTYTCQVTYQGHTFE-------DSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKG 145 (323)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTEEEE-------EEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSS
T ss_pred EEEEcHHHcCCCCcEEEEEEeCCCCcc-------eeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCC
Confidence 577777777899999999999765421 11111 00111233 33445555667889999999999885 556
Q ss_pred --eEEEEECC-EEeecCCcEEEEecC----CeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEee----ccCCccccC
Q psy8139 483 --KVSWYKDG-FEIFSSRRQRIVTDN----DISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRL----EAPPTIRLP 551 (1101)
Q Consensus 483 --~v~W~~~g-~~~~~~~~~~~~~~~----~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V----~~~p~~~~~ 551 (1101)
.|+|++++ ..+...........+ ..+.|.|.++...|+|.|+|.|.|..+.......+.+ ..+|.+...
T Consensus 146 ~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~ 225 (323)
T 2wqr_A 146 TVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAF 225 (323)
T ss_dssp CCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEE
T ss_pred ceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEe
Confidence 89999965 433222111110111 2347999999999999999999998754333333322 245544322
Q ss_pred CCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCeecCCCCceEE----Eeec----ceEEEEEccCCCCCCeEEEE
Q psy8139 552 KQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGEPLTSGGRYEI----THTD----RYLNLRISDARRADRGEYQA 621 (1101)
Q Consensus 552 ~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~~l~~~~~~~~----~~~~----~~~sl~i~~l~~~~~y~y~c 621 (1101)
+.... ...|+.+.|.|.+.|. |. +.+.|+++|..+..+. +.. ...+ ..+.|.|..+...|.|.|+|
T Consensus 226 ~~~~~---~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C 301 (323)
T 2wqr_A 226 ATPEW---PGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDAR-HSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFIC 301 (323)
T ss_dssp ECCCC---TTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGG-EEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEE
T ss_pred CCChH---HhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCc-eeecCcccCCCCcEEEEEEEEEChHHccCCCEEEE
Confidence 11111 1128999999999984 43 3899999999886432 111 0111 13578899988889999999
Q ss_pred EEEeCCCC
Q psy8139 622 HGVNSLGE 629 (1101)
Q Consensus 622 ~A~N~~G~ 629 (1101)
.|.|..+.
T Consensus 302 ~a~n~~~~ 309 (323)
T 2wqr_A 302 RAVHEAAS 309 (323)
T ss_dssp EEECTTST
T ss_pred EEEeCCCC
Confidence 99998876
No 194
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.56 E-value=1e-13 Score=151.92 Aligned_cols=255 Identities=14% Similarity=0.072 Sum_probs=155.2
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecC-CeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDN-DISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~-~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
+...+.++.+.+|+++.|.|.+.+. ++|++++..+.. .......+ ..+.|.|.++...|+|.|+|.|.|..|.
T Consensus 3 i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 3 VTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp BCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC----
T ss_pred ecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCC
Confidence 3334556788999999999999874 999999887631 11211122 1368999999999999999999998876
Q ss_pred ---eEEEEEEeeccCCccccCCCCC-CCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEc
Q psy8139 534 ---SITKARLRLEAPPTIRLPKQYE-DGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRIS 609 (1101)
Q Consensus 534 ---~~~s~~l~V~~~p~~~~~~~~~-~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~ 609 (1101)
...+..|.|..++....+.... ..+.+..|+.+.|.|.+. .|.+.++|.+.+........+ ....+ +.
T Consensus 77 ~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~----~~~~~-~~-- 148 (289)
T 3mjg_X 77 ETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPY----DHQRG-FS-- 148 (289)
T ss_dssp --CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCE----ETTTE-EE--
T ss_pred CcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceee----cCCcC-ee--
Confidence 3334555555333221111100 015688899999999998 778899998865222211111 11111 11
Q ss_pred cCCCCCCeEEEEEEEeCCCCcee-EEEEEEecCCCCCCccE-----EEEecCCeEEEEeecCCCCCCcccceeEEEEEcC
Q psy8139 610 DARRADRGEYQAHGVNSLGEDVA-SFLVTVTDRPLPPGKAK-----VVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRP 683 (1101)
Q Consensus 610 ~l~~~~~y~y~c~A~N~~G~~~~-s~~l~v~~~P~~P~~~~-----~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~ 683 (1101)
...|.|.|+|.|.|..|.... ...+.+... .+| .+. .....+.++.|.|...+.
T Consensus 149 --~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~-~~p-~i~~~~~~~~v~~G~~v~L~C~~~g~---------------- 208 (289)
T 3mjg_X 149 --GIFEDRSYICKTTIGDREVDSDAYYVYRLQV-SSI-NVSVNAVQTVVRQGENITLMCIVIGN---------------- 208 (289)
T ss_dssp --ECCCSSEEEEEEEETTEEEECCCEEEEECCC-CCC-CCEEEESCSEEETTSCEEEEEEEESC----------------
T ss_pred --eeccCcEEEEEEEeCCceeeeeeEEEEecCC-CCC-CcEEeCCcceeEcCCCEEEEEEECCC----------------
Confidence 356899999999987765433 345666542 222 111 234567889999986321
Q ss_pred CCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEE
Q psy8139 684 PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRIT 763 (1101)
Q Consensus 684 ~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 763 (1101)
....+.|..+....+..+.... .... .........++|.++...+...|.|.
T Consensus 209 ------------------p~p~v~W~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~L~I~~v~~~D~G~Y~C~ 260 (289)
T 3mjg_X 209 ------------------EVVNFEWTYPRKESGRLVEPVT---DFLL-------DMPYHIRSILHIPSAELEDSGTYTCN 260 (289)
T ss_dssp ------------------SSBEEEEECTTSSSSCCCCCEE---EESC-------TTTTEEEEEEEESSCCSSCCEEEEEE
T ss_pred ------------------CCcceEEEcCCccCCCcccccc---cccC-------CcceEEEEEEEEcccChhhCcEEEEE
Confidence 1246788754332222111100 0000 00013446789999999999999999
Q ss_pred EEcCCccC
Q psy8139 764 AENVVGFS 771 (1101)
Q Consensus 764 A~n~~G~g 771 (1101)
|.|..|..
T Consensus 261 a~N~~G~~ 268 (289)
T 3mjg_X 261 VTESVNDH 268 (289)
T ss_dssp EEETTTTE
T ss_pred eecCCCCc
Confidence 99999973
No 195
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.56 E-value=4.9e-14 Score=149.14 Aligned_cols=145 Identities=17% Similarity=0.256 Sum_probs=104.3
Q ss_pred cceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEec---CCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeE
Q psy8139 601 DRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTD---RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYI 677 (1101)
Q Consensus 601 ~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~---~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~ 677 (1101)
....++.|.+|.+++.|.|+|.|.|..|.+..+..+.+.. .|.+|.++.+...+.+++.|+|.+|...+
T Consensus 55 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~-------- 126 (234)
T 3f7q_A 55 SKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETN-------- 126 (234)
T ss_dssp ESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCS--------
T ss_pred CCccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCC--------
Confidence 3466899999999999999999999999776655555543 46677788887777777777777654322
Q ss_pred EEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCC-----ceeecccccCccEEEEcCC
Q psy8139 678 VEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY-----WVRASPHMVEDTELMVSGL 752 (1101)
Q Consensus 678 v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~-----~~~~~~~~~~~~~~~i~~L 752 (1101)
+.|.+|.|.|+..+... |..........++++|.+|
T Consensus 127 ---------------------------------------g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L 167 (234)
T 3f7q_A 127 ---------------------------------------GEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENL 167 (234)
T ss_dssp ---------------------------------------SCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECC
T ss_pred ---------------------------------------CceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCC
Confidence 35777777777655432 3333333345679999999
Q ss_pred CCCceEEEEEEEEcCCccCCCCCC-CCcEEecCCCCCCCCCcc
Q psy8139 753 EPGWRYQFRITAENVVGFSEPGPL-SEPLTVTYQRSPAAAPSF 794 (1101)
Q Consensus 753 ~p~t~Y~~~V~A~n~~G~g~~S~~-s~~~t~~~~~~P~~~p~~ 794 (1101)
.|++.|.|+|.|.|..|.|++|.. ..+. +.+..|+.+|..
T Consensus 168 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~--T~~~~P~~~P~~ 208 (234)
T 3f7q_A 168 RESQPYRYTVKARNGAGWGPEREAIINLA--TQPKRPMSIPII 208 (234)
T ss_dssp CTTCCEEEEEEEEETTEECCCEEEEECGG--GSCCCCCCCCCC
T ss_pred CCCCeEEEEEEEECCCccCCCcCceeEee--cCCCCCCCCccc
Confidence 999999999999999999888653 2222 233566666644
No 196
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.55 E-value=8.2e-14 Score=147.66 Aligned_cols=184 Identities=14% Similarity=0.079 Sum_probs=130.2
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.+...|.. .+..|++++|.|.+.+ +.+.+.|+++|..+..... ..........|.|.++...|+|.|+|.+.|
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 81 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRV 81 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEec
Confidence 456788777776 7899999999999875 4568999999987642100 001123455899999999999999999988
Q ss_pred CCCce--EEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceE
Q psy8139 530 RAGHS--ITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYL 604 (1101)
Q Consensus 530 ~~g~~--~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~ 604 (1101)
..+.. +....|.|.. +|.+...+ ...+..|++++|.|.+.+. .+.+.|+++|..+.. .........
T Consensus 82 ~~~~s~~S~~~~L~V~~~~~~P~i~~~p----~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~ 152 (242)
T 1p6f_A 82 GELWSEPSNLLDLVVTEMYDTPTLSVHP----GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQA 152 (242)
T ss_dssp TTEECCCCCCEEEEEECCSCCCEEEEES----CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEECSSEE
T ss_pred CCccccCCcceEEEeecccCCCceEccC----CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCCCceE
Confidence 65533 3346677764 44443322 2367899999999998764 469999999876543 122334578
Q ss_pred EEEEccCCCCCCeEEEEEEEeCC---CCceeEEEEEEecCCCCC
Q psy8139 605 NLRISDARRADRGEYQAHGVNSL---GEDVASFLVTVTDRPLPP 645 (1101)
Q Consensus 605 sl~i~~l~~~~~y~y~c~A~N~~---G~~~~s~~l~v~~~P~~P 645 (1101)
.|.|.+++..|.|.|+|.|.|.. ...+....|.|.+.+..|
T Consensus 153 ~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P 196 (242)
T 1p6f_A 153 EFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENT 196 (242)
T ss_dssp EEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC-----
T ss_pred EEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCC
Confidence 89999999999999999999874 133456788888766555
No 197
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.55 E-value=4.3e-14 Score=147.21 Aligned_cols=169 Identities=14% Similarity=0.147 Sum_probs=121.7
Q ss_pred CeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--E---Eee---------cCCcEEEEecCCeeEEEEeecCCC
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--F---EIF---------SSRRQRIVTDNDISTLIIHQAALM 518 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~---~~~---------~~~~~~~~~~~~~~~l~I~~l~~~ 518 (1101)
|.+...|..+.+.+|++++|.|.+.+.|.+.+.|++++ . .+. ...++.+...++..+|.|.++...
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 34566678889999999999999999999999999842 1 111 135666666667779999999999
Q ss_pred CCEEEEEEEEeCCCc---eEEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCCeeEEEECCeecCC
Q psy8139 519 DEGEIKCTATNRAGH---SITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPPTARWLHNGEPLTS 591 (1101)
Q Consensus 519 d~g~Y~C~a~n~~g~---~~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~~v~W~~~g~~l~~ 591 (1101)
|+|.|+|.|.|..+. ......|.|.. +|.+...+. ...+..|+.+.|.|.+.+ .|.+.+.|+++|..+..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~---~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~ 158 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPP---SADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTT 158 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECC---CHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCS
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCC---chhhccCCcEeEEEEEecccCCcEEEEEeCCccCCC
Confidence 999999999998773 23345566633 333322111 112335889999999998 89999999999988864
Q ss_pred CCceEEE--e-e-c---ceEEEEEccCCCCCCeEEEEEEE
Q psy8139 592 GGRYEIT--H-T-D---RYLNLRISDARRADRGEYQAHGV 624 (1101)
Q Consensus 592 ~~~~~~~--~-~-~---~~~sl~i~~l~~~~~y~y~c~A~ 624 (1101)
+...... . . + ..+.|.|..+...|.|.|+|.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 159 GIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp SEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 3200000 0 0 0 13578899999999999999998
No 198
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.55 E-value=2.9e-14 Score=148.64 Aligned_cols=179 Identities=15% Similarity=0.172 Sum_probs=123.7
Q ss_pred cCceeEEccCCeEEEEEEEeccCCCe---EEEEECCEEeecC------------------CcEEEEe---cCCeeEEEEe
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIPTPK---VSWYKDGFEIFSS------------------RRQRIVT---DNDISTLIIH 513 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p~~~---v~W~~~g~~~~~~------------------~~~~~~~---~~~~~~l~I~ 513 (1101)
.|..+++..|++++|.|.+.+.|.+. |.|++++..+... .++.+.. .....+|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 45678899999999999999888764 8999875432210 1111111 1123479999
Q ss_pred ecCCCCCEEEEEEEEeCCCceEEE-EEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCC
Q psy8139 514 QAALMDEGEIKCTATNRAGHSITK-ARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSG 592 (1101)
Q Consensus 514 ~l~~~d~g~Y~C~a~n~~g~~~~s-~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~ 592 (1101)
++...|+|.|.|.+.+..+..... ..+.+..++.....+ .....+..|..+.+.|.+.+.|.|.++|++++..+...
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~ 162 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNP--GPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS 162 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEE--CSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeee--eeeeeeeeccccceeeeccCCcCceEEEEECCcccccC
Confidence 999999999999999876655443 344444433322111 12335567889999999999999999999998776543
Q ss_pred CceEEEe-ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 593 GRYEITH-TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 593 ~~~~~~~-~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
....... ....+.|.|.++...|.|.|+|.|.|..|..+....+.+
T Consensus 163 ~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 163 RSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 2221111 111457999999999999999999999998776655543
No 199
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.55 E-value=6.8e-14 Score=150.45 Aligned_cols=184 Identities=17% Similarity=0.113 Sum_probs=126.8
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEEC--CE---Eee-------------cCCcEEEEec--CCeeEEEEeecC
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKD--GF---EIF-------------SSRRQRIVTD--NDISTLIIHQAA 516 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~--g~---~~~-------------~~~~~~~~~~--~~~~~l~I~~l~ 516 (1101)
|..+.+.+|++++|.|.+.+.| .+.+.|+++ +. .+. ...++.+... ++..+|+|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 4456789999999999999875 688999985 21 111 1245655543 456799999999
Q ss_pred CCCCEEEEEEEEeCCCc------e---EEEEEEeeccCCcc------------ccCCCCCCCeEEeeCCEEEEEEEEeec
Q psy8139 517 LMDEGEIKCTATNRAGH------S---ITKARLRLEAPPTI------------RLPKQYEDGLLFEMGEIIKLKVSMAGM 575 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g~------~---~~s~~l~V~~~p~~------------~~~~~~~~~~~v~~g~~~~l~c~~~g~ 575 (1101)
..|+|.|.|.|.|..|. . ...+.|.|..+|.. ......+..+.+..|++++|.|.+.+.
T Consensus 87 ~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 166 (257)
T 1f3r_B 87 TDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQN 166 (257)
T ss_dssp TTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSC
T ss_pred cccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCc
Confidence 99999999999998651 1 12356777765310 000011223457789999999999999
Q ss_pred CCCeeEEEE--CCeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC
Q psy8139 576 PPPTARWLH--NGEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDR 641 (1101)
Q Consensus 576 p~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~ 641 (1101)
+.+.+.|++ +|..+. ...++.+...+...+|.|.++...|+|.|.|.|.|....-.....|.|...
T Consensus 167 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~ 246 (257)
T 1f3r_B 167 INNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAA 246 (257)
T ss_dssp CBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSS
T ss_pred CCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCC
Confidence 989999999 554331 124555554555678999999999999999999997511122345555544
Q ss_pred C
Q psy8139 642 P 642 (1101)
Q Consensus 642 P 642 (1101)
+
T Consensus 247 ~ 247 (257)
T 1f3r_B 247 E 247 (257)
T ss_dssp C
T ss_pred C
Confidence 3
No 200
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.54 E-value=1.2e-13 Score=147.66 Aligned_cols=186 Identities=13% Similarity=0.123 Sum_probs=127.9
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--EE---e--------------ecCCcEEEEec--CCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--FE---I--------------FSSRRQRIVTD--NDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~~---~--------------~~~~~~~~~~~--~~~~~l~I~~l 515 (1101)
|..+.+.+|++++|.|.+.+.| .+.+.|+++. .. + ....++.+... ++..+|.|.++
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 3457899999999999999887 6789999832 11 1 01245555543 45678999999
Q ss_pred CCCCCEEEEEEEEeCCCce--EEEEEEeeccCCcc---------ccCC---CCCCCeEEeeCCEEEEEEEEeecCCCeeE
Q psy8139 516 ALMDEGEIKCTATNRAGHS--ITKARLRLEAPPTI---------RLPK---QYEDGLLFEMGEIIKLKVSMAGMPPPTAR 581 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~g~~--~~s~~l~V~~~p~~---------~~~~---~~~~~~~v~~g~~~~l~c~~~g~p~~~v~ 581 (1101)
...|+|.|.|.|.|..+.. ...+.|.|..+|.. ..++ ..+..+.+..|+++.|.|.+.+.+.+.+.
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~ 168 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLA 168 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEE
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEE
Confidence 9999999999999974322 22356777754310 0011 11224467889999999999999999999
Q ss_pred EEE--CCeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc-eeEEEEEEecCCCCC
Q psy8139 582 WLH--NGEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED-VASFLVTVTDRPLPP 645 (1101)
Q Consensus 582 W~~--~g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~-~~s~~l~v~~~P~~P 645 (1101)
|++ ++..+. ...++.+...+...+|.|.++...|.|.|+|.|.|..+.. .....|.|. .+.+|
T Consensus 169 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~-~~~~p 246 (247)
T 2ghw_B 169 WYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK-SGLVP 246 (247)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-CSCCC
T ss_pred EEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC-CCCCC
Confidence 998 554331 1345555545557789999999999999999999864432 234456665 33443
No 201
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.54 E-value=5.5e-14 Score=146.99 Aligned_cols=174 Identities=13% Similarity=0.125 Sum_probs=117.3
Q ss_pred eeeecCceeEEccCCeEEEEEEEecc-CCCeEEEEECC---EE------------ee---cCCcEEEEecCCeeEEEEee
Q psy8139 454 SFIRALHDTTALEDEKVEFTVQVEGI-PTPKVSWYKDG---FE------------IF---SSRRQRIVTDNDISTLIIHQ 514 (1101)
Q Consensus 454 ~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~~v~W~~~g---~~------------~~---~~~~~~~~~~~~~~~l~I~~ 514 (1101)
.+...| .+.+.+|++++|.|.+.+. |.+.+.|++.. .. .. ...++.+...++..+|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 344556 7889999999999999999 89999999821 10 00 11355555556667899999
Q ss_pred cCCCCCEEEEEEEEeCCC-----ceEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEE
Q psy8139 515 AALMDEGEIKCTATNRAG-----HSITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWL 583 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g-----~~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~ 583 (1101)
+...|+|.|.|.+.|..| .....+.|.|.. +|.+...+. ...+..|+.+.|.|.+.+ .|.+ .+.|+
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~---~~~~~~~~~v~L~C~~~g~~p~~~~v~W~ 158 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPP---SSEELKENKATLVCLISNFSPSGVTVAWK 158 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECC---CHHHHHTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCC---CcccccCCcEEEEEEECcccCCCeEEEEE
Confidence 999999999999999876 222345777773 343322111 112335788999999998 5666 89999
Q ss_pred ECCeecCCCCceE--EEeecc---eEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 584 HNGEPLTSGGRYE--ITHTDR---YLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 584 ~~g~~l~~~~~~~--~~~~~~---~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
++|.++..+.... ....+. ...|.|......|.|.|+|.|.|..|...
T Consensus 159 k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 211 (218)
T 3s96_B 159 ANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVE 211 (218)
T ss_dssp ETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEE
T ss_pred ECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccc
Confidence 9999886521110 000111 23477777777789999999999876543
No 202
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.54 E-value=1e-13 Score=157.43 Aligned_cols=307 Identities=14% Similarity=0.102 Sum_probs=133.1
Q ss_pred ceEEEeeecccccccccceeeeccCCCCCCCCCcccCCCCCCC-CCeeEEEEeCCCC-C-CCcCeeEEEEEEEecCCCce
Q psy8139 319 PLYVRLEEAITGLNVGTDLYCVIKKPPGPPGKPQLLPDSPSLD-RDVFTIRWEPPEY-D-GGSPVLGYLVEHRRTGSPYW 395 (1101)
Q Consensus 319 g~Y~c~a~n~~G~~~s~~~~~~v~~~p~~P~~p~~l~~~~~~~-~~sv~l~W~~p~~-~-g~~~i~~Y~v~~~~~~~~~w 395 (1101)
+.+..++.|..|.+..++..+ .|.||..+.+ . +.+ .+++.|+|.+|.. + .+..+..|.|+++..+...|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~v----~~~pP~nl~v---~-~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w 81 (380)
T 3lb6_C 10 CLYTFLISTTFGCTSSSDTEI----KVNPPQDFEI---V-DPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETW 81 (380)
T ss_dssp -------------------------CCCCCEEEEE---E-CCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSC
T ss_pred hhhhheeecccccccCCcccc----cCCcCCceEE---E-ecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcc
Confidence 445666666666554433222 3555555555 2 455 6899999999864 2 22358899999998777778
Q ss_pred EEcCccccccceEEEcCccCCccEEEEEEEEec----CCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEE
Q psy8139 396 VRASPHMVEDTELMVSGLEPGWRYQFRITAENV----VGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVE 471 (1101)
Q Consensus 396 ~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~----~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~ 471 (1101)
...... .+....++..+..|.|+|.|.|. .|.+.+|.++..++.... ...|| ..|. .
T Consensus 82 ~~~~~~----~~~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~--eg~P~---~~P~----------n 142 (380)
T 3lb6_C 82 KTIITK----NLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISP--QGIPE---TXVQ----------D 142 (380)
T ss_dssp EEEEES----SSEEEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCC--CSCTT---SSCE----------E
T ss_pred eEEEec----cEEEEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCC--CCCCC---CCCc----------E
Confidence 876432 22344566668999999999965 676666644433332111 11111 1233 3
Q ss_pred EEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccC
Q psy8139 472 FTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLP 551 (1101)
Q Consensus 472 L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~ 551 (1101)
+.|.........++|...... .. ... |........+...
T Consensus 143 l~C~~~~~~~l~csW~p~~~~-~~----------------------~~~--Y~l~y~~~~~~~~---------------- 181 (380)
T 3lb6_C 143 MDCVYYNWQYLLCSWKPGIGV-LL----------------------DTN--YNLFYWYEGLDHA---------------- 181 (380)
T ss_dssp EEEEEETTTEEEEEEECC-----------------------------CC--EEEEEECTTCSSC----------------
T ss_pred eEEEECCCcEEEEEEcCCCCC-CC----------------------Ccc--EEEEEEECCCCcc----------------
Confidence 444444333334455321100 00 001 2211111100000
Q ss_pred CCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEE--ccCCCCCCeEEEEEEEeCCCC
Q psy8139 552 KQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRI--SDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 552 ~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i--~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
..|... ... .+....+.+ .++...+.|.+.+.|.|..|.
T Consensus 182 ----------------~~C~~~---------~~~--------------~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~ 222 (380)
T 3lb6_C 182 ----------------LQCVDY---------IKA--------------DGQNIGCRFPYLEASDYKDFYICVNGSSENKP 222 (380)
T ss_dssp ----------------EECSEE---------EEC----------------CEEEEECCCCTTCSSSCEEEEEEEC-----
T ss_pred ----------------ccCCCc---------ccc--------------CCceEEEEeCCCcccceeEEEEEEEEEcCCee
Confidence 011000 000 000112222 245567789999999998887
Q ss_pred ceeE-EEEEEe--cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEE
Q psy8139 630 DVAS-FLVTVT--DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTI 706 (1101)
Q Consensus 630 ~~~s-~~l~v~--~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l 706 (1101)
.... ..+... ..|+||.++.+....++++.|+|++|..
T Consensus 223 ~~s~~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~--------------------------------------- 263 (380)
T 3lb6_C 223 IRSSYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLG--------------------------------------- 263 (380)
T ss_dssp CCCEEEEECGGGSCCCCCCEEEEEC-------CEEEECCSS---------------------------------------
T ss_pred eccccEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCC---------------------------------------
Confidence 5432 233332 3688888888776666677777776542
Q ss_pred EeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcC-CCCCceEEEEEEEEcC---CccCCCCCCCCcEEe
Q psy8139 707 RWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSG-LEPGWRYQFRITAENV---VGFSEPGPLSEPLTV 782 (1101)
Q Consensus 707 ~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~---~G~g~~S~~s~~~t~ 782 (1101)
..++.+.+|.|.|+.. +..|..... .+++.|.+ |.|++.|.|+|+|... .+.|.+|++|.....
T Consensus 264 -------~~~~~~l~Yev~y~~~-~~~w~~~~~----~~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~ 331 (380)
T 3lb6_C 264 -------PIPARCFDYEIEIRED-DTTLVTATV----ENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCW 331 (380)
T ss_dssp -------SCCSTTEEEEECC---------CCEE----SSSCC------------CCEEEEECTTTCSSCCCCCCCCC---
T ss_pred -------CCCcceEEEEEEEEeC-CCCceEecc----cceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEE
Confidence 2223478899998885 346655332 13577888 9999999999999855 355677888877766
Q ss_pred c
Q psy8139 783 T 783 (1101)
Q Consensus 783 ~ 783 (1101)
.
T Consensus 332 ~ 332 (380)
T 3lb6_C 332 E 332 (380)
T ss_dssp -
T ss_pred e
Confidence 4
No 203
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.54 E-value=4.1e-14 Score=146.99 Aligned_cols=170 Identities=15% Similarity=0.149 Sum_probs=120.9
Q ss_pred CceeEEccCCeEEEEEEEeccCCCeEEEEEC--CEEe------------ecCCcEEEEecCCeeEEEEeecCCCCCEEEE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GFEI------------FSSRRQRIVTDNDISTLIIHQAALMDEGEIK 524 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~~------------~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~ 524 (1101)
|..+.+..|++++|.|.+.+.|.+.+.|+++ |..+ ....++.+...++...|.|.++...|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 7788899999999999999999899999984 2211 1124566655566779999999999999999
Q ss_pred EEEEeCCCceEE-EEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEee-cCC-CeeEEEECCeecCCC-Cc-eE
Q psy8139 525 CTATNRAGHSIT-KARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPP-PTARWLHNGEPLTSG-GR-YE 596 (1101)
Q Consensus 525 C~a~n~~g~~~~-s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~-~~v~W~~~g~~l~~~-~~-~~ 596 (1101)
|.|.|..|.... ...|.|.. +|.+...+.. ..+..|+.+.|.|.+.| .|. +.+.|+++|..+..+ .. ..
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~---~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 163 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPS---TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVT 163 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCC---HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEEC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCc---hhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccC
Confidence 999998765432 34667765 3443321111 01235889999999997 454 389999999988654 11 11
Q ss_pred EEeecc-----eEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 597 ITHTDR-----YLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 597 ~~~~~~-----~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
.....+ .+.|.|..+...|.|.|+|.|.|......
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (210)
T 1lk3_L 164 DQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSP 203 (210)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSC
T ss_pred CccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCe
Confidence 111111 34789999999999999999999876543
No 204
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.54 E-value=1.9e-14 Score=146.19 Aligned_cols=146 Identities=16% Similarity=0.305 Sum_probs=109.4
Q ss_pred EccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEee-cCCCCCEEEEEEEEeCCCceEEEEEEee
Q psy8139 464 ALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQ-AALMDEGEIKCTATNRAGHSITKARLRL 542 (1101)
Q Consensus 464 v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~-l~~~d~g~Y~C~a~n~~g~~~~s~~l~V 542 (1101)
...|+++.|.|.+.+ |. .++|+++|..+... ...+|.|.+ +...|+|.|+|.|.|..|.......+.|
T Consensus 11 ~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~---------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v 79 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DE-NLKWEKNGQELPQK---------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARV 79 (186)
T ss_dssp EEETTEEEEECSSCC-CT-TCEEEETTEEECSC---------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCC
T ss_pred EeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC---------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 467999999999988 44 49999999988653 122799999 9999999999999999888555555544
Q ss_pred ccCCcccc------------C----CCC-C--CCe---EEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEee
Q psy8139 543 EAPPTIRL------------P----KQY-E--DGL---LFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHT 600 (1101)
Q Consensus 543 ~~~p~~~~------------~----~~~-~--~~~---~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~ 600 (1101)
...+.... + +.. . ... .+..|+++.|.|.+ |.|.+.|+++|..+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~------ 150 (186)
T 1jbj_A 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA------ 150 (186)
T ss_dssp CSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC------
T ss_pred ecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC------
Confidence 43211110 0 000 0 011 23389999999988 7899999999998864322
Q ss_pred cceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 601 DRYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 601 ~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
....|.|.++.+.|.|.|+|.|.|..|..
T Consensus 151 -~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 -TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp -CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred -CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 35678999999999999999999998865
No 205
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.54 E-value=2.9e-14 Score=157.00 Aligned_cols=174 Identities=11% Similarity=0.018 Sum_probs=112.0
Q ss_pred CCcceEEEEEEeCCCCCceeec-ccccCccEEEEc--CCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCc
Q psy8139 717 SPVLGYLVEHRRTGSPYWVRAS-PHMVEDTELMVS--GLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPS 793 (1101)
Q Consensus 717 ~~i~~Y~V~~~~~~~~~~~~~~-~~~~~~~~~~i~--~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~ 793 (1101)
+++. |.|+|+..+...|.... -.....+.+.++ +|.|++.|.|||.|.| .|.|++|....+.+.. ..+++||.
T Consensus 31 ~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~f~~~~--~~~~~pP~ 106 (306)
T 3s98_A 31 GNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFR--KAQIGPPE 106 (306)
T ss_dssp --CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEEEC-SSCEEEEECCCBCHHH--HCBCCCCE
T ss_pred CCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEEEe-CCcCCCEeeeeEechh--hCccCCCe
Confidence 3455 99999988777897642 122345566554 5689999999999999 8877766444333322 45667776
Q ss_pred ccccccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeeccccccCCCC
Q psy8139 794 FIRALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVETNEHTGTGAP 873 (1101)
Q Consensus 794 ~~~~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~~~~~~~~ 873 (1101)
......++++.+.|.|+.. ++. ....++.++ .|.|.|+..+....|. .......+.+.+|.
T Consensus 107 v~~~~~~~si~v~w~P~~~-~~~-----~~~~~g~~l------------~Y~v~y~~~~~~~~~~-~~~~~~~~~l~~L~ 167 (306)
T 3s98_A 107 VHLEAEDKAIVIHISPGTK-DSV-----MWALDGLSF------------TYSLVIWKNSSGVEER-IENIYSRHKIYKLS 167 (306)
T ss_dssp EEEEECSSCEEEEEECC----CC-----CC-----CC------------EEEEEEEETTTCCCEE-EEEECTEEEECSCC
T ss_pred EEEEEcCCEEEEEEECCCC-CCc-----ceeccCCcE------------EEEEEEEECCCCCeEE-EecccceEEEccCC
Confidence 4334344577788886542 210 011235566 9999888777555554 23333455555555
Q ss_pred CCCCCccCcccce--eeccc--cccc---CceeecccCCCCccCCCCCChhhhh
Q psy8139 874 SDNENESDYFPEK--TIDES--VYGY---DTIVYGYDSDDLDRHYPTLDEEEEE 920 (1101)
Q Consensus 874 ~~l~~~~~~t~Y~--V~a~n--~~G~---~~~v~~~t~e~~P~~~P~~v~~~~~ 920 (1101)
+++.|. |+|.| ..|. |..+...|.++.|..+|.||.+.+.
T Consensus 168 -------p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~ 214 (306)
T 3s98_A 168 -------PETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ 214 (306)
T ss_dssp -------TTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEE
T ss_pred -------CCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEe
Confidence 999999 99999 3343 7778888888899999999999877
No 206
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.53 E-value=2.1e-13 Score=148.26 Aligned_cols=191 Identities=16% Similarity=0.201 Sum_probs=130.6
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC-----EEee---------cCCcEEEEecCCeeEEEEeecCC
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG-----FEIF---------SSRRQRIVTDNDISTLIIHQAAL 517 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g-----~~~~---------~~~~~~~~~~~~~~~l~I~~l~~ 517 (1101)
.+.+...|.++.+.+|++++|.|.+.+.|.+.+.|++++ ..+. ...++.+...++..+|+|.++..
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 445667788899999999999999999999999999853 1221 13466666566677999999999
Q ss_pred CCCEEEEEEEEeCCCce-EEEEEEeeccCCc-------------cccCCCCCCCeEEeeCCEEEEEEEEeecC--CCeeE
Q psy8139 518 MDEGEIKCTATNRAGHS-ITKARLRLEAPPT-------------IRLPKQYEDGLLFEMGEIIKLKVSMAGMP--PPTAR 581 (1101)
Q Consensus 518 ~d~g~Y~C~a~n~~g~~-~~s~~l~V~~~p~-------------~~~~~~~~~~~~v~~g~~~~l~c~~~g~p--~~~v~ 581 (1101)
.|+|.|.|.+.|..+.. ...+.|.|..+|. +.. ..+....+..|+++.|.|.+.+.+ .+.+.
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~--~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~ 169 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQL--VESGGGLVQPGGSLRLSCAASGFTISDYWIH 169 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEE--EEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEE--ECCCceEecCCCeEEEEEEecCccCCCCEEE
Confidence 99999999999976542 2335677766542 111 112345788899999999999876 58999
Q ss_pred EEECC--eec-----------------CCCCceEEEee--cceEEEEEccCCCCCCeEEEEEEEeCC---CC--ceeEEE
Q psy8139 582 WLHNG--EPL-----------------TSGGRYEITHT--DRYLNLRISDARRADRGEYQAHGVNSL---GE--DVASFL 635 (1101)
Q Consensus 582 W~~~g--~~l-----------------~~~~~~~~~~~--~~~~sl~i~~l~~~~~y~y~c~A~N~~---G~--~~~s~~ 635 (1101)
|++++ ... ....++.+... ....+|.|.++...|+|.|.|.|.|.. +. -.....
T Consensus 170 W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~ 249 (276)
T 3auv_A 170 WVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTL 249 (276)
T ss_dssp EEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEE
T ss_pred EEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEE
Confidence 99853 111 11235555432 345689999999999999999999984 22 122456
Q ss_pred EEEecCCCC
Q psy8139 636 VTVTDRPLP 644 (1101)
Q Consensus 636 l~v~~~P~~ 644 (1101)
|.|...|..
T Consensus 250 l~V~~~~~~ 258 (276)
T 3auv_A 250 VTVSSASAA 258 (276)
T ss_dssp EEEC-----
T ss_pred EEEcccccc
Confidence 666644433
No 207
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.53 E-value=1.3e-14 Score=151.55 Aligned_cols=194 Identities=11% Similarity=0.010 Sum_probs=126.4
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
.+|++|.++.+...+.+++.|+|++|.+.+ + .
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~-----------------------------------------------~-~ 37 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETH-----------------------------------------------L-E 37 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCS-----------------------------------------------S-C
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCC-----------------------------------------------C-C
Confidence 567777777777766677777777654332 1 3
Q ss_pred ceEEEEEEeCCCCCceeecccccCccEEEEcCC-CCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCccccc-
Q psy8139 720 LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGL-EPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRA- 797 (1101)
Q Consensus 720 ~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~~- 797 (1101)
++|.|+|+..++..+.. .......++++|.+| .|++.|.|+|.|.|..|.+.. .. .........++.||.++..
T Consensus 38 ~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s-~~--~~~~~~~~~~p~pP~~~~~~ 113 (215)
T 1bqu_A 38 TNFTLKSEWATHKFADC-KAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTS-DH--INFDPVYKVKPNPPHNLSVI 113 (215)
T ss_dssp CEEEEEEEETTEECCCE-ECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEEC-CC--EEECGGGSEECCCCEEEEEE
T ss_pred ceEEEEEEEcCCCcccc-ccccCCcceEEEcCCccccccEEEEEEEEecccCccC-Cc--EEecccccCcCCCCCceEEE
Confidence 57777777654322222 222356689999999 999999999999999998752 21 2222222456677877652
Q ss_pred -c--cccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeeccccccCCCCC
Q psy8139 798 -L--HDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVETNEHTGTGAPS 874 (1101)
Q Consensus 798 -~--~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~~~~~~~~~ 874 (1101)
. .++++.+.|.+|.. .+++++ .|.|.|+..+ +..|....+. .........
T Consensus 114 ~~~~~~~sv~l~W~~p~~------------~~~~i~------------~Y~v~y~~~~-~~~~~~~~~~--~~~~~~~~~ 166 (215)
T 1bqu_A 114 NSEELSSILKLTWTNPSI------------KSVIIL------------KYNIQYRTKD-ASTWSQIPPE--DTASTRSSF 166 (215)
T ss_dssp CC--CCSCEEEEEECCGG------------GGTSCE------------EEEEEEEETT-CSSCEECCGG--GGCSCCSEE
T ss_pred EecCCCceEEEEEeCCCC------------CCcceE------------EEEEEEccCC-CCCceEeccc--cccCccceE
Confidence 2 55778888977432 234455 8999998876 4557654221 001122223
Q ss_pred CCCCccCcccce--eeccccccc------CceeecccCCCCccCCC
Q psy8139 875 DNENESDYFPEK--TIDESVYGY------DTIVYGYDSDDLDRHYP 912 (1101)
Q Consensus 875 ~l~~~~~~t~Y~--V~a~n~~G~------~~~v~~~t~e~~P~~~P 912 (1101)
.+.+|.+.+.|. |+|.|..|. +..+...|.+++|..+|
T Consensus 167 ~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P~~~p 212 (215)
T 1bqu_A 167 TVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKEP 212 (215)
T ss_dssp EECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHHHHHH
T ss_pred EeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccCCcCCC
Confidence 344455999999 999998875 56677888888887766
No 208
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.52 E-value=2.4e-13 Score=145.97 Aligned_cols=179 Identities=11% Similarity=0.144 Sum_probs=128.7
Q ss_pred cCceeEEccCCeEEEEEEEeccC--CCeEEEEEC--CEEe---e--------------cCCcEEEEec--CCeeEEEEee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKD--GFEI---F--------------SSRRQRIVTD--NDISTLIIHQ 514 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~--g~~~---~--------------~~~~~~~~~~--~~~~~l~I~~ 514 (1101)
.|..+.+.+|++++|.|.+.+.| .+.+.|+++ +..+ . ...++.+... ++..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 45567899999999999998875 678999983 2211 0 1245555543 4567899999
Q ss_pred cCCCCCEEEEEEEEeCCCc-----eEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC-----eeEEEE
Q psy8139 515 AALMDEGEIKCTATNRAGH-----SITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP-----TARWLH 584 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g~-----~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~-----~v~W~~ 584 (1101)
+...|+|.|.|.+.|..|. ......|.|..+|.+...| ..+.+..|++++|.|.+.+.|.+ .+.|++
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p---~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 162 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTP---LSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYL 162 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEEC---SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEE
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecC---cEEEEecCCcEEEEeEecCcccccccceEEEEEE
Confidence 9999999999999998763 1224577787666554333 24468899999999999998865 999999
Q ss_pred --CCeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc-eeEEEEEEe
Q psy8139 585 --NGEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED-VASFLVTVT 639 (1101)
Q Consensus 585 --~g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~-~~s~~l~v~ 639 (1101)
+|..+. ...++.........+|.|.++.+.|+|.|+|.|.|..+.. .....|.|.
T Consensus 163 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 163 QKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp ECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 554331 1245555545557789999999999999999999854322 223445664
No 209
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.52 E-value=2.7e-14 Score=150.79 Aligned_cols=168 Identities=16% Similarity=0.208 Sum_probs=118.3
Q ss_pred cCceeEEccCCeEEEEEEEeccCC-CeEEEEECCEE-----ee----cCC--cEEEE----------ecCCeeEEEEeec
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIPT-PKVSWYKDGFE-----IF----SSR--RQRIV----------TDNDISTLIIHQA 515 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p~-~~v~W~~~g~~-----~~----~~~--~~~~~----------~~~~~~~l~I~~l 515 (1101)
.|.++.+..|+++.|.|.+.+.|. +.+.|++++.. +. ... ...+. ... .+.|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~L~i~~v 84 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDS-QGRLVLAEA 84 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECT-TCCEEESSC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCC-CceEEEccc
Confidence 466788999999999999999985 89999975422 11 010 11111 111 124999999
Q ss_pred CCCCCEEEEEEEEeCC-CceEEEEEEeeccCCccccCCCCCCCeEEeeCCEE-EEEEEE-eecCCCeeEEEECCeecCCC
Q psy8139 516 ALMDEGEIKCTATNRA-GHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEII-KLKVSM-AGMPPPTARWLHNGEPLTSG 592 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~-g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~-~l~c~~-~g~p~~~v~W~~~g~~l~~~ 592 (1101)
...|+|.|+|.+.+.. |.....+.|.|..+|..+..........+..|..+ .|.|.+ .+.|.+.+.|+++|..+...
T Consensus 85 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~ 164 (231)
T 2pet_A 85 QVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVP 164 (231)
T ss_dssp CGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCC
T ss_pred CcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccc
Confidence 9999999999999987 77777788999877543221111122344568877 999999 89999999999999988755
Q ss_pred C----ceEEEeec----c-----eEEEEEccCCCCCCeEEEEEEEeC
Q psy8139 593 G----RYEITHTD----R-----YLNLRISDARRADRGEYQAHGVNS 626 (1101)
Q Consensus 593 ~----~~~~~~~~----~-----~~sl~i~~l~~~~~y~y~c~A~N~ 626 (1101)
. ++.+.... . .+.|.|......+.|.|+|.|.|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 165 VEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred cccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 4 34333211 0 155777755555699999999995
No 210
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.52 E-value=3.7e-13 Score=137.64 Aligned_cols=132 Identities=29% Similarity=0.458 Sum_probs=111.6
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVS 485 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~ 485 (1101)
..|.|.+++..|.|.|+|.|.|..|.... ...+.+.. ...+|.+...+....+..|+.+.|.|.+.|.|.+.+.
T Consensus 63 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~-----~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~ 136 (194)
T 2a38_A 63 AKLTIPAVTKANSGRYSLKATNGSGQATS-----TAELLVKA-ETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVK 136 (194)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEE-----EEEEEEEC-CCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCceEeE-----EEEEEEcc-CCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEE
Confidence 57999999999999999999998775432 23343332 2356777777888889999999999999999999999
Q ss_pred EEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 486 WYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 486 W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
|+++|..+.....+.+...+....|.|.++...|.|.|+|.|.|..|....++.|.|.
T Consensus 137 W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 137 FYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9999999988888888777777799999999999999999999999998888877763
No 211
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.51 E-value=1.6e-13 Score=141.40 Aligned_cols=169 Identities=12% Similarity=0.054 Sum_probs=117.6
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcE-EEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQ-RIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~-~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
..+|.+...|. ..+.+|++++|.|.+.+ |.+.+.|+++|..+...... ..........|.|.++...|+|.|+|.+.
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 35677777776 67889999999999974 77899999988654321110 01112234589999999999999999998
Q ss_pred eCCC-----ceEEEEEEeeccC---CccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEee
Q psy8139 529 NRAG-----HSITKARLRLEAP---PTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHT 600 (1101)
Q Consensus 529 n~~g-----~~~~s~~l~V~~~---p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~ 600 (1101)
|..+ ..+....|.|... |.+...+. ..+..|+.++|.|.+.+ +.+.+.|+++|..+...........
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~----~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~ 158 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG----PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVN 158 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC----SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEET
T ss_pred cCCCCccccCCCCCEEEEeeccCCCCceecCCC----CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccC
Confidence 7532 2233456777653 44433322 26789999999999886 5689999999987653221111111
Q ss_pred -cceEEEEEccCCCCCCeEEEEEEEeCC
Q psy8139 601 -DRYLNLRISDARRADRGEYQAHGVNSL 627 (1101)
Q Consensus 601 -~~~~sl~i~~l~~~~~y~y~c~A~N~~ 627 (1101)
.....|.|.+++ |.|.|+|.|.+..
T Consensus 159 ~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 159 GTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp TEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred CceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 126789999998 9999999998753
No 212
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.51 E-value=7.7e-14 Score=145.03 Aligned_cols=170 Identities=12% Similarity=0.124 Sum_probs=120.3
Q ss_pred eecCceeEEccCCeEEEEEEEeccCCCeEEEEEC--CEEee------------cCCcEEEEecCCeeEEEEeecCCCCCE
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEG 521 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g 521 (1101)
...| .+.+.+|++++|.|.+. |.+.+.|+++ +.... ...++.+....+..+|.|.++...|+|
T Consensus 5 ~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 81 (211)
T 3tv3_L 5 TQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEA 81 (211)
T ss_dssp BCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCE
T ss_pred EeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCE
Confidence 3344 77899999999999998 8889999983 22111 224566555666779999999999999
Q ss_pred EEEEEEEeCCC--ceEEEEEEeec----cCCccccCCCCCCCeEEeeCCEEEEEEEEeec--CCCeeEEEECCeecCCCC
Q psy8139 522 EIKCTATNRAG--HSITKARLRLE----APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM--PPPTARWLHNGEPLTSGG 593 (1101)
Q Consensus 522 ~Y~C~a~n~~g--~~~~s~~l~V~----~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~--p~~~v~W~~~g~~l~~~~ 593 (1101)
.|.|.+.|..| .....+.|.|. .+|.+...+.. ..+..|..+.|.|.+.|. |.+.+.|+++|..+..+.
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~---~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 158 (211)
T 3tv3_L 82 VYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPS---SEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGV 158 (211)
T ss_dssp EEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCC---HHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTE
T ss_pred EEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCc---hhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCc
Confidence 99999999887 23345677777 34544332211 122258999999999985 358999999999876421
Q ss_pred ceE--EEeecc----eEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 594 RYE--ITHTDR----YLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 594 ~~~--~~~~~~----~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
... ....++ ...|.|..+...|.|.|+|.|.|..|...
T Consensus 159 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~ 202 (211)
T 3tv3_L 159 ETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 202 (211)
T ss_dssp EECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEE
T ss_pred ccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEE
Confidence 110 001111 35688888888899999999999876543
No 213
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.50 E-value=3.6e-12 Score=141.32 Aligned_cols=122 Identities=18% Similarity=0.170 Sum_probs=86.2
Q ss_pred CCCeEEEEEEEeCCCCceeE-EEEEEe--cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCC
Q psy8139 614 ADRGEYQAHGVNSLGEDVAS-FLVTVT--DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKP 690 (1101)
Q Consensus 614 ~~~y~y~c~A~N~~G~~~~s-~~l~v~--~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p 690 (1101)
.+.|.|++.|.|..|.+..+ ..+.+. ..|+||.++.+. ...+++.|+|.+|...
T Consensus 169 ~~~y~~~V~a~n~~G~~~~~~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~~---------------------- 225 (314)
T 3bpo_C 169 FEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQNF---------------------- 225 (314)
T ss_dssp ---CCEEEEEEETTSCSCCEEEEECSSSSEECCCCEEEEEE-EETTEEEEEEECCTTC----------------------
T ss_pred eeEEEEEEEEEcCCCceecccEEEehhheEeeCCCCEEEEE-EcCCcEEEEEeCCCcc----------------------
Confidence 56899999999998877544 222222 358999988876 6677888888876421
Q ss_pred cccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecc------------cccCccEEEEcCCCCCceE
Q psy8139 691 QLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASP------------HMVEDTELMVSGLEPGWRY 758 (1101)
Q Consensus 691 ~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~------------~~~~~~~~~i~~L~p~t~Y 758 (1101)
++.+++|.|.|+..++..|..... .....+.++|.+|.|++.|
T Consensus 226 -------------------------~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y 280 (314)
T 3bpo_C 226 -------------------------ISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLN 280 (314)
T ss_dssp -------------------------CGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCE
T ss_pred -------------------------CCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEE
Confidence 123678999999887777764221 1145678999999999999
Q ss_pred EEEEEEEcCC----ccCCCCCCCCcEEec
Q psy8139 759 QFRITAENVV----GFSEPGPLSEPLTVT 783 (1101)
Q Consensus 759 ~~~V~A~n~~----G~g~~S~~s~~~t~~ 783 (1101)
.|+|+|.+.. +.|.+|++|......
T Consensus 281 ~~qVra~~~~~~~~~~g~WS~WS~~~~~~ 309 (314)
T 3bpo_C 281 TVRIRVKTNKLCYEDDKLWSNWSQEMSIG 309 (314)
T ss_dssp EEEEEEEECTTTSCCCCCCCCCCCCEEES
T ss_pred EEEEEeeecccccCCCCeeCCCCCCeEec
Confidence 9999999973 467788888888765
No 214
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.50 E-value=1.4e-13 Score=143.25 Aligned_cols=176 Identities=13% Similarity=0.137 Sum_probs=122.2
Q ss_pred CeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC---E--Eee---------cCCcEEEEecCCeeEEEEeecCCC
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG---F--EIF---------SSRRQRIVTDNDISTLIIHQAALM 518 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g---~--~~~---------~~~~~~~~~~~~~~~l~I~~l~~~ 518 (1101)
|.+...|..+.+.+|++++|.|.+.+.|.+.+.|++.+ . .+. ...++.+...++..+|.|.++...
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 34556678889999999999999999999999999832 1 111 134666665666779999999999
Q ss_pred CCEEEEEEEEeCCCceE-EEEEEee---ccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCC--CeeEEEECCeecCCC
Q psy8139 519 DEGEIKCTATNRAGHSI-TKARLRL---EAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPP--PTARWLHNGEPLTSG 592 (1101)
Q Consensus 519 d~g~Y~C~a~n~~g~~~-~s~~l~V---~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~--~~v~W~~~g~~l~~~ 592 (1101)
|+|.|.|.|.|..+... ....|.| ..+|.+...+. ...+..|..+.|.|.+.+.++ +.+.|+++|..+..+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~---~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 158 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPP---SSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDG 158 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECC---CHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCC---CceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCc
Confidence 99999999998765332 2356776 34444432221 112335778999999998654 489999999888653
Q ss_pred C--ceEEEeec-----ceEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 593 G--RYEITHTD-----RYLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 593 ~--~~~~~~~~-----~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
. ........ ....+.|......+.|.|+|.|.|......
T Consensus 159 ~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 159 VLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAA 204 (213)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred eEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcc
Confidence 1 11111101 024577777777789999999999865433
No 215
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.50 E-value=2e-13 Score=146.38 Aligned_cols=187 Identities=12% Similarity=0.138 Sum_probs=128.8
Q ss_pred eecCceeEEccCCeEEEEEEEeccC--CCeEEEEEC--CEE---e--------------ecCCcEEEEec--CCeeEEEE
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKD--GFE---I--------------FSSRRQRIVTD--NDISTLII 512 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~--g~~---~--------------~~~~~~~~~~~--~~~~~l~I 512 (1101)
+..|..+.+.+|++++|.|.+.+.+ .+.+.|++. +.. + ....++.+... .+..+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 4456678899999999999998844 678999982 211 1 01245555543 34567999
Q ss_pred eecCCCCCEEEEEEEEeCCCceE-EEEEEeeccC---------------CccccCCCCCCCeEEeeCCEEEEEEEEeecC
Q psy8139 513 HQAALMDEGEIKCTATNRAGHSI-TKARLRLEAP---------------PTIRLPKQYEDGLLFEMGEIIKLKVSMAGMP 576 (1101)
Q Consensus 513 ~~l~~~d~g~Y~C~a~n~~g~~~-~s~~l~V~~~---------------p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p 576 (1101)
.++..+|+|.|.|.+.|..+... ....|.|... |.+... +....+..|++++|.|.+.+.+
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~---p~~~~v~~G~~v~L~C~~~~~~ 161 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQT---PASLAVSLGQRATISCRASENV 161 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEE---CSEEEECTTSCEEEEEEESSCC
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECc---CCeEEEeCCCCEEEEEEecCcc
Confidence 99999999999999999665542 3456777642 222222 2245788999999999999988
Q ss_pred CC----eeEEEEC--CeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc-eeEEEEE
Q psy8139 577 PP----TARWLHN--GEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED-VASFLVT 637 (1101)
Q Consensus 577 ~~----~v~W~~~--g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~-~~s~~l~ 637 (1101)
.+ .+.|+++ +.... ...++.....+...+|+|.++...|+|.|.|.|.|..+.. .....|.
T Consensus 162 ~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~ 241 (253)
T 3uzq_A 162 DRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLE 241 (253)
T ss_dssp EETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEE
T ss_pred ccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEE
Confidence 76 9999984 22211 1245555555567789999999999999999999976533 2345677
Q ss_pred EecCCCCC
Q psy8139 638 VTDRPLPP 645 (1101)
Q Consensus 638 v~~~P~~P 645 (1101)
|...+.+|
T Consensus 242 v~~~~~~~ 249 (253)
T 3uzq_A 242 IKRPLEHH 249 (253)
T ss_dssp ECCC----
T ss_pred EcCCCCCc
Confidence 77655444
No 216
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.50 E-value=4.4e-14 Score=148.18 Aligned_cols=178 Identities=20% Similarity=0.285 Sum_probs=122.8
Q ss_pred eeEEccCCeEEEEEEEeccCC-----CeEEEEECCEEe-------------ecCCcEEEEe---cCCeeEEEEeecCCCC
Q psy8139 461 DTTALEDEKVEFTVQVEGIPT-----PKVSWYKDGFEI-------------FSSRRQRIVT---DNDISTLIIHQAALMD 519 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~g~p~-----~~v~W~~~g~~~-------------~~~~~~~~~~---~~~~~~l~I~~l~~~d 519 (1101)
.+.+..|++++|.|.+.+.|. +.+.|++++... ....+..+.. ..+..+|.|.++...|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 346789999999999988764 689999976322 0112222221 1124579999999999
Q ss_pred CEEEEEEEEeCCCceEEEEEEeeccC---CccccCCCCCCCeEEeeCCEEEEEEEE-eecCCCeeEEEE-CCeecCCCCc
Q psy8139 520 EGEIKCTATNRAGHSITKARLRLEAP---PTIRLPKQYEDGLLFEMGEIIKLKVSM-AGMPPPTARWLH-NGEPLTSGGR 594 (1101)
Q Consensus 520 ~g~Y~C~a~n~~g~~~~s~~l~V~~~---p~~~~~~~~~~~~~v~~g~~~~l~c~~-~g~p~~~v~W~~-~g~~l~~~~~ 594 (1101)
+|.|+|.+.+. +.......|.|..+ |.+...+ ...+..|..+.|.|.+ .+.|.+.+.|++ ++..+.....
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~----~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~ 158 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP----NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVT 158 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC---------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC----CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcc
Confidence 99999999986 44445556666654 3333332 2256779999999999 789999999998 4555543222
Q ss_pred eEEEe--ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCC
Q psy8139 595 YEITH--TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPL 643 (1101)
Q Consensus 595 ~~~~~--~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~ 643 (1101)
..... .+....+.|.++...|.|.|+|.|.|..|.......+.|.++|-
T Consensus 159 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 159 TSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp EEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC---
T ss_pred eeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcc
Confidence 22221 12234578899999999999999999999999999999987763
No 217
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.50 E-value=2.2e-13 Score=139.26 Aligned_cols=160 Identities=16% Similarity=0.205 Sum_probs=112.2
Q ss_pred cCceeEEccCCeEEEEEEEec-cCCCeEEEEECCEEee---cC---------------CcEEEEecCCeeEEEEeecCCC
Q psy8139 458 ALHDTTALEDEKVEFTVQVEG-IPTPKVSWYKDGFEIF---SS---------------RRQRIVTDNDISTLIIHQAALM 518 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g-~p~~~v~W~~~g~~~~---~~---------------~~~~~~~~~~~~~l~I~~l~~~ 518 (1101)
.|..+.+..|++++|.|.+.+ .+.+.|.|++++..+. .. .+..+. ...+|.|.++...
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~ 80 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKME 80 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGG
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcc
Confidence 456678899999999999875 4557999999986542 10 122332 1348999999999
Q ss_pred CCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCC-EEEEEEEEeec-CCCeeEEEECCeecCCCCceE
Q psy8139 519 DEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGE-IIKLKVSMAGM-PPPTARWLHNGEPLTSGGRYE 596 (1101)
Q Consensus 519 d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~-~~~l~c~~~g~-p~~~v~W~~~g~~l~~~~~~~ 596 (1101)
|+|.|.|.+.|..|.......|.|..++..+..... ......|. .+.|.|.+.+. |.+.+.|+++|..+..+
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~--~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~---- 154 (193)
T 2if7_A 81 DTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNH--SQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQ---- 154 (193)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEEC--CC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESS----
T ss_pred cCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecC--ceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCC----
Confidence 999999999999887766778888765432111000 01223455 89999999985 58999999998765432
Q ss_pred EEeecceEEEEEccCCC-CCCeEEEEEEEeCCCCceeE
Q psy8139 597 ITHTDRYLNLRISDARR-ADRGEYQAHGVNSLGEDVAS 633 (1101)
Q Consensus 597 ~~~~~~~~sl~i~~l~~-~~~y~y~c~A~N~~G~~~~s 633 (1101)
..|.|..... .|.|.|+|.|.|..|..+..
T Consensus 155 -------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 155 -------PNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp -------SEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred -------CeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 2344443333 37999999999999976443
No 218
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.49 E-value=5.1e-13 Score=143.53 Aligned_cols=178 Identities=11% Similarity=0.095 Sum_probs=125.8
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEec--cCCCeEEEEECC--E---Eee--------------cCCcEEEEe--cCCe
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEG--IPTPKVSWYKDG--F---EIF--------------SSRRQRIVT--DNDI 507 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g--~p~~~v~W~~~g--~---~~~--------------~~~~~~~~~--~~~~ 507 (1101)
.+|.+...+..+.+.+|++++|.|.+.+ .+.+.+.|++.. . .+. ...++.+.. .++.
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 5567788889999999999999999988 367789999732 1 110 123566553 3455
Q ss_pred eEEEEeecCCCCCEEEEEEEEeC------------CCceEEEEEEeeccCCccc------------cCCCCCCCeEEeeC
Q psy8139 508 STLIIHQAALMDEGEIKCTATNR------------AGHSITKARLRLEAPPTIR------------LPKQYEDGLLFEMG 563 (1101)
Q Consensus 508 ~~l~I~~l~~~d~g~Y~C~a~n~------------~g~~~~s~~l~V~~~p~~~------------~~~~~~~~~~v~~g 563 (1101)
.+|+|.++..+|+|.|.|.+.|. .+.......|.|..++... .....+....+..|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 68999999999999999999986 2223334667777643210 00112234577889
Q ss_pred CEEEEEEEEeecCC-CeeEEEEC--CeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCC
Q psy8139 564 EIIKLKVSMAGMPP-PTARWLHN--GEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLG 628 (1101)
Q Consensus 564 ~~~~l~c~~~g~p~-~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G 628 (1101)
++++|.|.+.+.+. +.+.|++. +.... ...++.+...+...+|.|.++...|+|.|.|.|.|..+
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999999876 89999872 22211 23455555556677899999999999999999998543
No 219
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.49 E-value=9.1e-14 Score=150.52 Aligned_cols=183 Identities=15% Similarity=0.229 Sum_probs=123.4
Q ss_pred CeeeecCceeEEccCCeEEEEEEEe---ccCCCeEEEEECCEEeec------------------CCcEEEEe--cCCeeE
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVE---GIPTPKVSWYKDGFEIFS------------------SRRQRIVT--DNDIST 509 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~---g~p~~~v~W~~~g~~~~~------------------~~~~~~~~--~~~~~~ 509 (1101)
+.+...+..+.+.+|++++|.|.+. +.|.+.+.|++++..... ..+..+.. ..+..+
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3445566778899999999999987 777788999995431110 12222211 122358
Q ss_pred EEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEE---eecCCCeeEEEECC
Q psy8139 510 LIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSM---AGMPPPTARWLHNG 586 (1101)
Q Consensus 510 l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~---~g~p~~~v~W~~~g 586 (1101)
|.|.++...|+|.|+|.+.|..+.......+.+...|. .+....+..|..+.|.|.+ .+.|.+.+.|++++
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~------~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE------EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSS 159 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC------CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEEC
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc------CCCccccccCCcEEEEEEecCCCCCCccceEEEecC
Confidence 99999999999999999999876654443333332221 1224578899999999999 56689999999843
Q ss_pred ee-cCCC---------------------CceEEEe--ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecC
Q psy8139 587 EP-LTSG---------------------GRYEITH--TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDR 641 (1101)
Q Consensus 587 ~~-l~~~---------------------~~~~~~~--~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~ 641 (1101)
.. .... .+..+.. .....+|.|.++...|.|.|+|.|.|..|.......|.|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 238 (268)
T 3mj6_A 160 GSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQD 238 (268)
T ss_dssp TTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcC
Confidence 21 1110 0111110 123668999999999999999999999888888888888543
No 220
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.49 E-value=4e-13 Score=138.42 Aligned_cols=169 Identities=15% Similarity=0.200 Sum_probs=114.9
Q ss_pred eeEEccCCeEEEEEEEe----ccCCCeEEEEECCEEeec------------CCcEEEEecCCeeEEEEeecCCCCCEEEE
Q psy8139 461 DTTALEDEKVEFTVQVE----GIPTPKVSWYKDGFEIFS------------SRRQRIVTDNDISTLIIHQAALMDEGEIK 524 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~----g~p~~~v~W~~~g~~~~~------------~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~ 524 (1101)
.+.+..|++++|.|.+. +.|.+.+.|.+++..+.. ..+..+. ..+..+|.|.++...|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEE
Confidence 46788999999999985 457789999999987631 1222221 223458999999999999999
Q ss_pred EEEEeCCCceE-----EEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEe-ecCCCeeEEEECCeecCCCCceEEE
Q psy8139 525 CTATNRAGHSI-----TKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMA-GMPPPTARWLHNGEPLTSGGRYEIT 598 (1101)
Q Consensus 525 C~a~n~~g~~~-----~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~-g~p~~~v~W~~~g~~l~~~~~~~~~ 598 (1101)
|.|.|..|... ....|.|..++.. |... ......|+.+.|.|.+. |.|.|.+.|+++|..+.........
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~---p~~~-~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~ 157 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPT---PSIS-DFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQ 157 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCC---CEEE-EEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCC---CceE-eccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEe
Confidence 99999876543 3566777654321 1000 00113478899999995 9999999999999888754322221
Q ss_pred eec-ce-EEEEEccCCCCCCeEEEEEEEeCCCCceeEE
Q psy8139 599 HTD-RY-LNLRISDARRADRGEYQAHGVNSLGEDVASF 634 (1101)
Q Consensus 599 ~~~-~~-~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~ 634 (1101)
... +. ....+..+...|.|.|+|.|.|..|..+...
T Consensus 158 ~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~ 195 (201)
T 1dr9_A 158 DPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTF 195 (201)
T ss_dssp CTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEE
T ss_pred cCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEE
Confidence 111 11 1222344556899999999999988765543
No 221
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.49 E-value=3.3e-13 Score=143.01 Aligned_cols=179 Identities=11% Similarity=0.096 Sum_probs=124.4
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--E---Ee---------ecCCcEEEEecCCeeEEEEeecCC
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--F---EI---------FSSRRQRIVTDNDISTLIIHQAAL 517 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~---~~---------~~~~~~~~~~~~~~~~l~I~~l~~ 517 (1101)
.+.+...|..+.+..|++++|.|.+.+.|.+.+.|++.+ . .+ ....++.....++..+|.|.++..
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 345566688889999999999999999999999999832 1 11 113466666566677999999999
Q ss_pred CCCEEEEEEEEeCCCceE-EEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeec-C-CCeeEEEECCeecCC
Q psy8139 518 MDEGEIKCTATNRAGHSI-TKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-P-PPTARWLHNGEPLTS 591 (1101)
Q Consensus 518 ~d~g~Y~C~a~n~~g~~~-~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p-~~~v~W~~~g~~l~~ 591 (1101)
.|+|.|.|.+.|..+... ....|.|.. +|.+...+. ...+..|+.+.|.|.+.+. | .+.+.|+++|..+..
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~---~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~ 180 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPP---SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG 180 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECC---CHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCC---ChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCC
Confidence 999999999998775332 234566643 333322111 1112347889999999984 4 589999999998864
Q ss_pred CC--ceEEEeec-----ceEEEEEccCCCCCCeEEEEEEEeCCCCceeE
Q psy8139 592 GG--RYEITHTD-----RYLNLRISDARRADRGEYQAHGVNSLGEDVAS 633 (1101)
Q Consensus 592 ~~--~~~~~~~~-----~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s 633 (1101)
+. ........ ....+.|......|.|.|+|.|.|........
T Consensus 181 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 181 NSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp SEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred ceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 31 00001000 13568888888889999999999987654433
No 222
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.49 E-value=4.9e-13 Score=138.97 Aligned_cols=132 Identities=18% Similarity=0.258 Sum_probs=96.3
Q ss_pred ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEec---CCC-CCCccEEEEe--cCCeEEEEeecCCCCCCcccce
Q psy8139 602 RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTD---RPL-PPGKAKVVMT--LGKSVTLSWSEPEDDGGCKIGN 675 (1101)
Q Consensus 602 ~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~---~P~-~P~~~~~~~~--~~~sv~lsW~~p~~~~g~~i~~ 675 (1101)
...++.|.+|.+++.|.|+|.|.|..|.+..+..+.+.. .|. +|.++.+... +.+++.|+|.+|..
T Consensus 62 ~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~-------- 133 (211)
T 3p4l_A 62 TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSE-------- 133 (211)
T ss_dssp SSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTT--------
T ss_pred CceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCC--------
Confidence 356899999999999999999999999877655555554 343 6666666655 24566666665532
Q ss_pred eEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCC---ceeecccccCccEEEEcCC
Q psy8139 676 YIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY---WVRASPHMVEDTELMVSGL 752 (1101)
Q Consensus 676 Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~---~~~~~~~~~~~~~~~i~~L 752 (1101)
.+++|.+|.|+|+..+... |.... ...+.++++|.+|
T Consensus 134 ---------------------------------------~~g~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~L 173 (211)
T 3p4l_A 134 ---------------------------------------ANGKITGYIIYYSTDVNAEIHDWVIEP-VVGNRLTHQIQEL 173 (211)
T ss_dssp ---------------------------------------CCSCCCEEEEEEESCTTSCGGGSEEEE-EESSCSEEEECCC
T ss_pred ---------------------------------------CCCCEEEEEEEEEECCCCCCCceEEEE-ecCCeeEEEEcCC
Confidence 2335788888887665432 33222 2367889999999
Q ss_pred CCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 753 EPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 753 ~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
.|++.|.|+|.|.|..|.|++|....+.+
T Consensus 174 ~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~ 202 (211)
T 3p4l_A 174 TLDTPYYFKIQARNSKGMGPMSEAVQFRT 202 (211)
T ss_dssp CTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred CCCCEEEEEEEEEcCCccCCCCCCEEccC
Confidence 99999999999999999999887654444
No 223
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.49 E-value=7.6e-13 Score=142.25 Aligned_cols=188 Identities=14% Similarity=0.162 Sum_probs=125.3
Q ss_pred eeecCceeEEccCCeEEEEEEEecc--CCCeEEEEECC----EEee--------------cCCcEEEEec--CCeeEEEE
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGI--PTPKVSWYKDG----FEIF--------------SSRRQRIVTD--NDISTLII 512 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~--p~~~v~W~~~g----~~~~--------------~~~~~~~~~~--~~~~~l~I 512 (1101)
.+..|..+.+.+|++++|.|.+.+. +.+.+.|++.. .... ...++.+... .+..+|.|
T Consensus 11 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 90 (257)
T 3gkz_A 11 QLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQL 90 (257)
T ss_dssp EEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred EEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEE
Confidence 3455667789999999999999884 47799999832 1111 1234555432 34568999
Q ss_pred eecCCCCCEEEEEEEEeCCCc----eEEEEEEeeccC--------------CccccCCCCCCCeEEeeCCEEEEEEEEee
Q psy8139 513 HQAALMDEGEIKCTATNRAGH----SITKARLRLEAP--------------PTIRLPKQYEDGLLFEMGEIIKLKVSMAG 574 (1101)
Q Consensus 513 ~~l~~~d~g~Y~C~a~n~~g~----~~~s~~l~V~~~--------------p~~~~~~~~~~~~~v~~g~~~~l~c~~~g 574 (1101)
.++..+|+|.|.|.|.|..+. ....+.|.|..+ +.+... +....+..|++++|.|.+.+
T Consensus 91 ~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~---p~~~~v~~G~~v~L~C~~~~ 167 (257)
T 3gkz_A 91 KSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQS---PAIMSASPGEKVTLTCSASS 167 (257)
T ss_dssp CSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECS---CSEEEECTTCCEEEEEEESS
T ss_pred CCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcC---CceEEEeCCCcEEEEEEEcc
Confidence 999999999999999997322 223456777654 222222 23457889999999999999
Q ss_pred cCCC-eeEEEEC--CeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc-eeEEEEEE
Q psy8139 575 MPPP-TARWLHN--GEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED-VASFLVTV 638 (1101)
Q Consensus 575 ~p~~-~v~W~~~--g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~-~~s~~l~v 638 (1101)
.+.+ .+.|++. +.... ...++.....+...+|.|.++...|+|.|.|.|.|..... .....|.|
T Consensus 168 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v 247 (257)
T 3gkz_A 168 SVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEI 247 (257)
T ss_dssp CCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred CccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEE
Confidence 8877 9999983 22211 1244555555567789999999999999999998754322 12345666
Q ss_pred ecCCCCC
Q psy8139 639 TDRPLPP 645 (1101)
Q Consensus 639 ~~~P~~P 645 (1101)
...|.+|
T Consensus 248 ~~~~~~~ 254 (257)
T 3gkz_A 248 KRAPHHH 254 (257)
T ss_dssp CCC----
T ss_pred EeCCCCC
Confidence 6444333
No 224
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.49 E-value=1.4e-13 Score=141.94 Aligned_cols=140 Identities=14% Similarity=0.056 Sum_probs=96.0
Q ss_pred CcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc-
Q psy8139 718 PVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR- 796 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~- 796 (1101)
.+.+|.|+|+..+...+........+.++++|.+|.|++.|.|+|.|.|..|.|.+ +.+.+.+ .++ +|.++.
T Consensus 50 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~---~~~~t~~---~~p-~P~~l~~ 122 (203)
T 2gee_A 50 TIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTP---TTLTQQT---AVP-PPTDLRF 122 (203)
T ss_dssp SCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEESSSCBCCC---EEEEEEC---CCC-CCEEEEE
T ss_pred CccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCcccc---EeeeecC---CCc-CCCceEE
Confidence 47788888887765544333333367789999999999999999999999998654 3333333 333 566655
Q ss_pred -cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeeccccccCCCCCC
Q psy8139 797 -ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVETNEHTGTGAPSD 875 (1101)
Q Consensus 797 -~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~~~~~~~~~~ 875 (1101)
...++++.+.|.+|. ++++. .|.|.|+.......|....+. .......
T Consensus 123 ~~~~~~sv~l~W~~p~--------------~~~i~------------~Y~v~~~~~~~~~~~~~~~~~-----~~~~~~~ 171 (203)
T 2gee_A 123 TNIGPDTMRVTWAPPP--------------SIDLT------------NFLVRYSPVKNEEDVAELSIS-----PSDNAVV 171 (203)
T ss_dssp EEEETTEEEEEEECCS--------------SCCCS------------EEEEEEEETTCGGGCEEEEEC-----TTCCEEE
T ss_pred EEcCCCEEEEEEcCCC--------------CCCcc------------EEEEEEEECCCCCccEEEEcC-----CCcCEEE
Confidence 556677888998752 23455 899999876654455544442 2222334
Q ss_pred CCCccCcccce--eeccccccc
Q psy8139 876 NENESDYFPEK--TIDESVYGY 895 (1101)
Q Consensus 876 l~~~~~~t~Y~--V~a~n~~G~ 895 (1101)
+.+|.+.+.|. |+|.|..|.
T Consensus 172 i~~L~p~t~Y~~~V~A~~~~g~ 193 (203)
T 2gee_A 172 LTNLLPGTEYVVSVSSVYEQHE 193 (203)
T ss_dssp ECSCCTTCEEEEEEEEEETTEE
T ss_pred ECCCCCCCEEEEEEEEecCCCc
Confidence 44455999999 999999998
No 225
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.48 E-value=3.7e-13 Score=142.84 Aligned_cols=172 Identities=16% Similarity=0.232 Sum_probs=118.4
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEEC--CEEe---------------ecCCcEEEEe-cCCeeEEEEeecC
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GFEI---------------FSSRRQRIVT-DNDISTLIIHQAA 516 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~~---------------~~~~~~~~~~-~~~~~~l~I~~l~ 516 (1101)
+...|.++.+.+|++++|.|. .+.|.+.+.|+++ +... ....++.+.. .....+|.|.++.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 445677889999999999999 7888999999985 2111 0123444443 2345589999999
Q ss_pred CCCCEEEEEEEEeCCCceE-----EEEEEeeccCCccc---------cCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEE
Q psy8139 517 LMDEGEIKCTATNRAGHSI-----TKARLRLEAPPTIR---------LPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARW 582 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g~~~-----~s~~l~V~~~p~~~---------~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W 582 (1101)
..|+|.|.|.|.|..|... ....|.|...+... .....+..+.+..|+++.|.|.+.+.|.+.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 9999999999999865311 23467776544210 000112345688999999999999999999999
Q ss_pred EECCe--ec------------CCCCceEEE--eecceEEEEEccCCCCCCeEEEEEEEeCC
Q psy8139 583 LHNGE--PL------------TSGGRYEIT--HTDRYLNLRISDARRADRGEYQAHGVNSL 627 (1101)
Q Consensus 583 ~~~g~--~l------------~~~~~~~~~--~~~~~~sl~i~~l~~~~~y~y~c~A~N~~ 627 (1101)
++++. .. ....++.+. ......+|.|.++...|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 98531 10 012334443 23345789999999999999999999984
No 226
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.48 E-value=4.9e-13 Score=143.08 Aligned_cols=172 Identities=15% Similarity=0.194 Sum_probs=122.1
Q ss_pred eeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC-----EEee---------cCCcEEEEecCCeeEEEEeecCCCC
Q psy8139 454 SFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG-----FEIF---------SSRRQRIVTDNDISTLIIHQAALMD 519 (1101)
Q Consensus 454 ~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g-----~~~~---------~~~~~~~~~~~~~~~l~I~~l~~~d 519 (1101)
.+...|..+.+.+|++++|.|.+.+.|.+.+.|++.. ..+. ...++.....++..+|.|.++..+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 3455677888999999999999999999999999842 1110 1345655556666789999999999
Q ss_pred CEEEEEEEEeCCCceE-EEEEEeeccCCc----------------cccCCCCCCCeEEeeCCEEEEEEEEeecC--CCee
Q psy8139 520 EGEIKCTATNRAGHSI-TKARLRLEAPPT----------------IRLPKQYEDGLLFEMGEIIKLKVSMAGMP--PPTA 580 (1101)
Q Consensus 520 ~g~Y~C~a~n~~g~~~-~s~~l~V~~~p~----------------~~~~~~~~~~~~v~~g~~~~l~c~~~g~p--~~~v 580 (1101)
+|.|.|.+.|..+... ....|.|..++. .......+....+..|+++.|.|.+.+.+ .+.+
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 165 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWM 165 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEE
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEE
Confidence 9999999998766533 234677765320 00001112345788999999999999877 7899
Q ss_pred EEEEC--CeecC-----------------CCCceEEEee--cceEEEEEccCCCCCCeEEEEEEEe
Q psy8139 581 RWLHN--GEPLT-----------------SGGRYEITHT--DRYLNLRISDARRADRGEYQAHGVN 625 (1101)
Q Consensus 581 ~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~sl~i~~l~~~~~y~y~c~A~N 625 (1101)
.|+++ +..+. ...++.+... ....+|.|.++.+.|+|.|.|.|.|
T Consensus 166 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 166 NWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 99986 43321 1134444432 3456899999999999999999997
No 227
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.48 E-value=1.6e-12 Score=132.53 Aligned_cols=130 Identities=22% Similarity=0.279 Sum_probs=109.2
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
.+..|.|.+++..|.|.|+|.|.|. |... ..+.+.+. .+|.+...+....+..|+.+.|.|.+.|.|.|.
T Consensus 54 ~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~-----~~~~l~V~----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~ 123 (190)
T 2wv3_A 54 SNMEYRINKPRAEDSGEYHCVYHFV-SAPK-----ANATIEVK----AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPE 123 (190)
T ss_dssp SEEEEEESSCCGGGCEEEEEEEEET-TEEE-----EEEEEEEE----CCCEEEEECSEEEEETTSCEEEEEEEECSSCCE
T ss_pred ccEEEEEecCCcccCEEEEEEEEeC-Cccc-----ccEEEEEe----cCCcccccCCcceeeCCCcEEEEEEeCccCCCc
Confidence 3467999999999999999999997 4332 33455543 568888888888999999999999999999999
Q ss_pred EEEEE--CCEEee---cCCcEEEEecCCeeEEEEeecC-CCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 484 VSWYK--DGFEIF---SSRRQRIVTDNDISTLIIHQAA-LMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 484 v~W~~--~g~~~~---~~~~~~~~~~~~~~~l~I~~l~-~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
+.|++ ++..+. ...++.+...+..+.|.|.++. ..|.|.|+|.|.|..|....++.|.|.
T Consensus 124 i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 124 WMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 99999 787765 4566777766777799999999 799999999999999998888888775
No 228
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.48 E-value=9.1e-13 Score=137.02 Aligned_cols=139 Identities=24% Similarity=0.341 Sum_probs=107.8
Q ss_pred cceEEEcCc-cCCccEEEEEEEEecCCCCCCCCCCcceEEEeccC---CCCCCeeeecCceeEEccCCeEEEEEEEeccC
Q psy8139 405 DTELMVSGL-EPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS---PAAAPSFIRALHDTTALEDEKVEFTVQVEGIP 480 (1101)
Q Consensus 405 ~~~l~i~~L-~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~---~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p 480 (1101)
...|.|.++ +..|.|.|+|.|.|..|... ..+.+.+... +...|.+...|....+..|+++.|.|.+.|.|
T Consensus 62 ~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~-----~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p 136 (212)
T 2yd6_A 62 GSVLRIQPLRTPRDEAIYECVASNNVGEIS-----VSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNP 136 (212)
T ss_dssp EEEEEECSCCTTTTCEEEEEEEEETTEEEE-----EEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSS
T ss_pred ceEEEEeccCCCCCCeEEEEEEEcCCCcEE-----EEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCC
Confidence 456999999 59999999999999887632 2344444332 23457788888888899999999999999999
Q ss_pred CCeEEEEECCEEeecC---CcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EEEEeeccCCcc
Q psy8139 481 TPKVSWYKDGFEIFSS---RRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KARLRLEAPPTI 548 (1101)
Q Consensus 481 ~~~v~W~~~g~~~~~~---~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~~l~V~~~p~~ 548 (1101)
.+.+.|+++|..+... .++.....+....|.|.++...|.|.|+|.|.|..|...+ .+.|.|..++.+
T Consensus 137 ~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~~ 208 (212)
T 2yd6_A 137 DPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKHH 208 (212)
T ss_dssp CCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred CCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecccc
Confidence 9999999999988653 4555555566779999999999999999999999998765 477888776644
No 229
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.48 E-value=6.8e-13 Score=141.14 Aligned_cols=172 Identities=14% Similarity=0.153 Sum_probs=120.6
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC-----EEee---------cCCcEEEEecCCeeEEEEeecCCCCC
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG-----FEIF---------SSRRQRIVTDNDISTLIIHQAALMDE 520 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g-----~~~~---------~~~~~~~~~~~~~~~l~I~~l~~~d~ 520 (1101)
+...|.++.+.+|++++|.|.+.+.|.+.+.|+++. ..+. ...++.+...++..+|+|.++...|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 456677889999999999999999999999999842 1111 13456665556667999999999999
Q ss_pred EEEEEEEEeCCCceE-EEEEEeeccCCcc----------ccCCCCCCCeEEeeCCEEEEEEEEeecC--CCeeEEEEC--
Q psy8139 521 GEIKCTATNRAGHSI-TKARLRLEAPPTI----------RLPKQYEDGLLFEMGEIIKLKVSMAGMP--PPTARWLHN-- 585 (1101)
Q Consensus 521 g~Y~C~a~n~~g~~~-~s~~l~V~~~p~~----------~~~~~~~~~~~v~~g~~~~l~c~~~g~p--~~~v~W~~~-- 585 (1101)
|.|.|.+.|..+... ....|.|..+|.. ......+....+..|++++|.|.+.+.+ .+.+.|++.
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~ 163 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFP 163 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECT
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCC
Confidence 999999998765322 2457777765530 0000011123578899999999999876 588999984
Q ss_pred CeecC----------------CCCceEEEe--ecceEEEEEccCCCCCCeEEEEEEEeC
Q psy8139 586 GEPLT----------------SGGRYEITH--TDRYLNLRISDARRADRGEYQAHGVNS 626 (1101)
Q Consensus 586 g~~l~----------------~~~~~~~~~--~~~~~sl~i~~l~~~~~y~y~c~A~N~ 626 (1101)
+..+. ...++.+.. .....+|.|.+++..|+|.|.|.|.|.
T Consensus 164 ~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 164 GNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp TSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 22210 123444443 234568999999999999999999884
No 230
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.48 E-value=3.5e-13 Score=156.03 Aligned_cols=293 Identities=12% Similarity=0.054 Sum_probs=166.5
Q ss_pred ccCCCCCCeEEEEEEEeCCCCceeEEEEEEe--cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCC
Q psy8139 609 SDARRADRGEYQAHGVNSLGEDVASFLVTVT--DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGP 686 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~--~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~ 686 (1101)
..+.....|.|++.|.|..|. ...+.+. ..|.||.++.+.... +.+.|+|++|......
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~--------------- 137 (419)
T 2gys_A 77 QSFVVTDVDYFSFQPDRPLGT---RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQS--------------- 137 (419)
T ss_dssp SCCCTTCEEEEEEEESSCCCE---EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC--------------------
T ss_pred cceeeecccEEEEeCCccccc---cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCcccccc---------------
Confidence 455556778899988776664 2222222 368999999887765 6888888876421100
Q ss_pred CCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEc--CCCCCceEEEEEEE
Q psy8139 687 PGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVS--GLEPGWRYQFRITA 764 (1101)
Q Consensus 687 p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~--~L~p~t~Y~~~V~A 764 (1101)
.| -....+.|.|.|+..+ ..|............+.+. +|.|++.|.|+|+|
T Consensus 138 --------------------~~------~~~~~l~Y~v~yr~~~-~~w~~~~~~~~~~~~~~~~~~~L~p~~~Y~~rVra 190 (419)
T 2gys_A 138 --------------------HW------LSPGDLEFEVVYKRLQ-DSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRT 190 (419)
T ss_dssp --------------------CC------SCGGGEEEEEEEEETT-SCSTTCEEEEESSSEEEECTTTCCTTCEEEEEEEE
T ss_pred --------------------ch------hccCceEEEEEEccCC-CChhheeeecccceEEEechhhcCCCCeEEEEEEE
Confidence 00 0124678999999887 6776654422345666666 99999999999999
Q ss_pred EcCC---ccCCCCCCCCcEEecCCCCCCCCCcccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhh
Q psy8139 765 ENVV---GFSEPGPLSEPLTVTYQRSPAAAPSFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLF 839 (1101)
Q Consensus 765 ~n~~---G~g~~S~~s~~~t~~~~~~P~~~p~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 839 (1101)
.|.. |.|.+|+++..+...+...++.+|.++. ....+.+.+.|.++ ....+ ..
T Consensus 191 ~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~~~~~l~c~W~~~------------~~~~~-~~--------- 248 (419)
T 2gys_A 191 RLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVR------------KEVAS-SV--------- 248 (419)
T ss_dssp EECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEECSSSEEEEEEEEE------------HHHHT-TC---------
T ss_pred ecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEECCceEEEeEEECC------------CCCCC-ce---------
Confidence 9975 5588999998887765444456677765 33445566788652 00001 12
Q ss_pred ceeeEEeeeeccCCC----CCCceeeeeccccccC------CCCCCCCCccCcccce--eecccccccCceeecccCCCC
Q psy8139 840 TFIETISSFRDKYVD----NEDDYDIVETNEHTGT------GAPSDNENESDYFPEK--TIDESVYGYDTIVYGYDSDDL 907 (1101)
Q Consensus 840 ~~~~Y~v~~r~~~~~----~~~~~~~v~~~~~~~~------~~~~~l~~~~~~t~Y~--V~a~n~~G~~~~v~~~t~e~~ 907 (1101)
.|.+.|+..... ..|...+.......+. .....+..+.+++.|. |.|.|+.|. +. +.+.+
T Consensus 249 ---~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~~~---~~--~~~~v 320 (419)
T 2gys_A 249 ---SFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKH---IK--SSVNI 320 (419)
T ss_dssp ---CEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCCEE---EE--GGGSB
T ss_pred ---eEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccCCcc---cc--ceEEE
Confidence 688877765321 1232222111000000 0011122344888898 777665553 00 11222
Q ss_pred ccCCCCCChhhhhhhhhhhccc-ccccc-ccchhhcccccchhhhhhcccc-c-ccccccccCCceeEeecCCCCCCCce
Q psy8139 908 DRHYPTLDEEEEEEDRESLVKD-RESSV-KGKEEEAKVIKDDEYYENLGDV-L-TKKYSLPVNSDIQIKIDKPDDEPDYV 983 (1101)
Q Consensus 908 P~~~P~~v~~~~~~~n~t~v~v-p~~~~-nG~i~gY~I~~~~~~y~~~~~~-~-~~~~~l~~~~~~~~~i~~~~~~~~~~ 983 (1101)
...|| ++.+... .++..|.| ||... ...+.+|.| .|+..++. . .....+. ....+.|.+|.+|+.|.
T Consensus 321 ~p~PP-~l~v~~~-~~~l~l~W~~P~~~~~~~~l~Yev-----~y~~~~~~w~~~~~~~~~--~~~~~~l~~L~p~t~Y~ 391 (419)
T 2gys_A 321 QMAPP-SLQVTKD-GDSYSLRWETMKMRYEHIDHTFEI-----QYRKDTATWKDSKTETLQ--NAHSMALPALEPSTRYW 391 (419)
T ss_dssp CCCCC-EEEEC----CCCEEEEEC--------CEEEEE-----EEECSSSCSTTSCEEEEE--SCSEEECCCCCSSCCCE
T ss_pred EECCC-CeEEEEe-CCeEEEEECCCcccccccceEEEE-----EEEcCCCCcceeeccccc--cccEEEeccCCCCCeEE
Confidence 34555 4555443 24555566 44322 125779999 88876543 1 1111122 45678999999999999
Q ss_pred eec
Q psy8139 984 IKG 986 (1101)
Q Consensus 984 ~~~ 986 (1101)
|..
T Consensus 392 ~qV 394 (419)
T 2gys_A 392 ARV 394 (419)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 231
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.48 E-value=4.3e-13 Score=143.37 Aligned_cols=177 Identities=13% Similarity=0.119 Sum_probs=117.2
Q ss_pred cCceeEEccCCeEEEEEEEeccCCCe-----EEEEECCEEee--------cCCcEEEEe----------cCCeeEEEEee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIPTPK-----VSWYKDGFEIF--------SSRRQRIVT----------DNDISTLIIHQ 514 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p~~~-----v~W~~~g~~~~--------~~~~~~~~~----------~~~~~~l~I~~ 514 (1101)
.|..+.+..|++++|.|.+.+.|.+. +.|++++.... ......... ..+..+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 45567789999999999999888775 99998532111 000000000 11234699999
Q ss_pred cCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEEECCeecCCC
Q psy8139 515 AALMDEGEIKCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWLHNGEPLTSG 592 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~~g~~l~~~ 592 (1101)
+...|+|.|+|.+.|..|.......|.|..+|.+...+. ..+..|..+.|.|.+.| .|.+ .+.|+++|..+...
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~----~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~ 164 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD----QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHP 164 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC------------CEEEEEEEEEBSSCCEEEEEEECSSSCSC
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC----CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCc
Confidence 999999999999999988877788999998887755433 13445777889999999 7888 99999998654321
Q ss_pred C------c-eEEEeec-----ceEEEEEccCCCCCCeEEEEEEEeCCCCcee--EEEEEE
Q psy8139 593 G------R-YEITHTD-----RYLNLRISDARRADRGEYQAHGVNSLGEDVA--SFLVTV 638 (1101)
Q Consensus 593 ~------~-~~~~~~~-----~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~--s~~l~v 638 (1101)
. . ....... ....|.|......+.|.|+|.|.|..+.... ...|.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 165 IEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp EEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 0 0 0111111 1346778888888999999999999887544 445555
No 232
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.48 E-value=1.8e-13 Score=124.22 Aligned_cols=97 Identities=28% Similarity=0.462 Sum_probs=89.0
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..||.|...|.++.+.+|+++.|.|.+.|.|.|.|+|+++|..+..+.++.+...++...|.|.++...|+|.|+|.|.|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 46789999999999999999999999999999999999999999988888888888888999999999999999999999
Q ss_pred CCCceEEEEEEeeccCC
Q psy8139 530 RAGHSITKARLRLEAPP 546 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p 546 (1101)
..|....++.|.|..+|
T Consensus 91 ~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCEEEEEEEEEEEcCC
Confidence 99999999999998765
No 233
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.48 E-value=1.1e-12 Score=143.03 Aligned_cols=184 Identities=14% Similarity=0.166 Sum_probs=126.8
Q ss_pred eecCceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E--E-ee--------------cCCcEEEEe--cCCeeEEEE
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F--E-IF--------------SSRRQRIVT--DNDISTLII 512 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~--~-~~--------------~~~~~~~~~--~~~~~~l~I 512 (1101)
...|..+.+.+|++++|.|.+.+.| .+.+.|++++ . . +. ...++.+.. .++..+|.|
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 109 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQL 109 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEE
Confidence 4456678899999999999998875 5789999853 1 1 10 124555554 234578999
Q ss_pred eecCCCCCEEEEEEEEeCCCc---e--EEEEEEeeccCCcc---------ccCC---CCCCCeEEeeCCEEEEEEEEeec
Q psy8139 513 HQAALMDEGEIKCTATNRAGH---S--ITKARLRLEAPPTI---------RLPK---QYEDGLLFEMGEIIKLKVSMAGM 575 (1101)
Q Consensus 513 ~~l~~~d~g~Y~C~a~n~~g~---~--~~s~~l~V~~~p~~---------~~~~---~~~~~~~v~~g~~~~l~c~~~g~ 575 (1101)
.++..+|+|.|.|.+.|..|. . ...+.|.|..+|.. ..++ ..+..+.+..|++++|.|.+.+.
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 189 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSS 189 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSC
T ss_pred CcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCC
Confidence 999999999999999998761 1 12356777765420 0000 11224467889999999999999
Q ss_pred CCCeeEEEE--CCeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc-eeEEEEEEec
Q psy8139 576 PPPTARWLH--NGEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED-VASFLVTVTD 640 (1101)
Q Consensus 576 p~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~-~~s~~l~v~~ 640 (1101)
+ +.+.|++ +|..+. ...++.........+|+|.++...|+|.|.|.|.|..+.. .....|.|..
T Consensus 190 ~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 190 V-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp C-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred C-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 9 9999999 554431 1345655555567789999999999999999998854322 2244566653
No 234
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.47 E-value=4.4e-13 Score=151.01 Aligned_cols=167 Identities=11% Similarity=0.122 Sum_probs=117.1
Q ss_pred cCceeEEccCCeEEEEEEEeccC--CCeEEEEEC--CEEee-----------------cCCcEEEEec--CCeeEEEEee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKD--GFEIF-----------------SSRRQRIVTD--NDISTLIIHQ 514 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~l~I~~ 514 (1101)
.|..+.+..|++++|.|.+.+.+ .+.+.|+++ +..+. ...++.+..+ ++..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 34567889999999999998863 678999986 32210 1345665543 3556899999
Q ss_pred cCCCCCEEEEEEEEeCCCceEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCee
Q psy8139 515 AALMDEGEIKCTATNRAGHSITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGEP 588 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~~ 588 (1101)
+..+|+|.|.|.|.|..+.....+.|.|.. +|.+...+.. ..+..|+.+.|.|.+.|. |. +.+.|+++|..
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~---~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 162 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPS---SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 162 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCS---CTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBC
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEcccc---ccccCCCcEEEEEEEeeEECCCeEEEEecCCcc
Confidence 999999999999999655444456777763 3333211111 123579999999999987 54 79999999876
Q ss_pred cCC---------CCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeE
Q psy8139 589 LTS---------GGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVAS 633 (1101)
Q Consensus 589 l~~---------~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s 633 (1101)
+.. +..+.. .+.|.|..+...+ |.|+|.|.|..|.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~ 210 (344)
T 1za6_B 163 SGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 210 (344)
T ss_dssp TTEEECCCEECTTSCEEE-----EEEEEEETTHHHH-BCEEEEEEEGGGTEEEE
T ss_pred CceeECCCeECCCCCEEE-----EEEEEEcHHHcCC-CcEEEEEEeCCCCccce
Confidence 421 112211 3478898888777 99999999998865433
No 235
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.47 E-value=1.3e-12 Score=151.12 Aligned_cols=102 Identities=18% Similarity=0.188 Sum_probs=68.3
Q ss_pred eeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCC-----cCeeEEEEEEEecCCCceEEcCccccccceEEEc--
Q psy8139 339 CVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGG-----SPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVS-- 411 (1101)
Q Consensus 339 ~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~-----~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~-- 411 (1101)
..-...|.||..+.+. ..+ +.+.|+|.+|..... .....|.|+++..+ ..|............+.+.
T Consensus 103 ~~~~v~p~pP~~l~v~----~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~~~~~~~~~~~~~ 176 (419)
T 2gys_A 103 LTQHVQPPEPRDLQIS----TDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAILLSNTSQATLGPE 176 (419)
T ss_dssp GGGSBCCCCCEEEEEE----EET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEEEESSSEEEECTT
T ss_pred HHHcccCCCCCceEEE----ecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeeecccceEEEechh
Confidence 3334566666665542 333 699999999864321 24679999999875 5665443221233455665
Q ss_pred CccCCccEEEEEEEEecC---CCCCCCCCCcceEEEec
Q psy8139 412 GLEPGWRYQFRITAENVV---GFSEPGPLSEPLTVTYQ 446 (1101)
Q Consensus 412 ~L~p~d~y~y~c~A~n~~---G~~~~s~~s~~vtv~~~ 446 (1101)
+|.|++.|.++|+|.+.. +.+.+|.+|.++.+...
T Consensus 177 ~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~ 214 (419)
T 2gys_A 177 HLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQ 214 (419)
T ss_dssp TCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECC
T ss_pred hcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeecc
Confidence 999999999999999965 44788888888887654
No 236
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.47 E-value=3.3e-13 Score=140.31 Aligned_cols=168 Identities=16% Similarity=0.139 Sum_probs=117.4
Q ss_pred CceeEEccCCeEEEEEEEeccC---CCeEEEEECC--EEe------------ecCCcEEEEecCCeeEEEEeecCCCCCE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP---TPKVSWYKDG--FEI------------FSSRRQRIVTDNDISTLIIHQAALMDEG 521 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p---~~~v~W~~~g--~~~------------~~~~~~~~~~~~~~~~l~I~~l~~~d~g 521 (1101)
|..+.+..|++++|.|.+.+.| .+.+.|++++ ..+ ....++.....++...|.|.++...|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 7788899999999999999887 4789999852 221 1124565555566679999999999999
Q ss_pred EEEEEEEeCCCceE-EEEEEeec----cCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC--eeEEEECCeecCCCCc
Q psy8139 522 EIKCTATNRAGHSI-TKARLRLE----APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP--TARWLHNGEPLTSGGR 594 (1101)
Q Consensus 522 ~Y~C~a~n~~g~~~-~s~~l~V~----~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~--~v~W~~~g~~l~~~~~ 594 (1101)
.|.|.+.|..+... ....|.|. .+|.+...+. ...+..|..+.|.|.+.|.+++ .+.|+++|..+..+..
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~---~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 163 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPP---SSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGME 163 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECC---CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCC---CHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCee
Confidence 99999999876432 23456664 3444332111 0112358899999999985433 8999999988865421
Q ss_pred eE-EEeec-----ceEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 595 YE-ITHTD-----RYLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 595 ~~-~~~~~-----~~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
.. ....+ ....|.|......|.|.|+|.|.|..+.
T Consensus 164 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 164 TTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred cCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 11 11111 1346888888888999999999997654
No 237
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.47 E-value=1.2e-13 Score=142.59 Aligned_cols=153 Identities=18% Similarity=0.211 Sum_probs=107.3
Q ss_pred EccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 464 ALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 464 v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
+..|++++|.|.+ |.+.+.|+++|..+... ......|.|.++...|+|.|+|.+.+..+ ....|.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s---~~~~v~v~ 81 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNKS---KPLQVYYR 81 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSCC---CCEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCCC---eeEEEEEE
Confidence 3579999999998 78899999999887532 11234799999999999999999754322 12334433
Q ss_pred c-------------------------------CCccccCCCCCCCeEEe-eCCEEEEEEEEeecCCCeeEEEECCeecCC
Q psy8139 544 A-------------------------------PPTIRLPKQYEDGLLFE-MGEIIKLKVSMAGMPPPTARWLHNGEPLTS 591 (1101)
Q Consensus 544 ~-------------------------------~p~~~~~~~~~~~~~v~-~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~ 591 (1101)
. ++.+... ...+. .|+++.|.|. +.|.+.+.|++++..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~ 154 (204)
T 1sy6_A 82 MGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQT-----PYKVSISGTTVILTCP--QYPGSEILWQHNDKNIGG 154 (204)
T ss_dssp C------------------------------------CC-----CCEEEEETTEEEEECS--CCCSSCEEEEETTEEESC
T ss_pred EeccccccccccccccccccccccccccccccccceecC-----CceeeecCCcEEEEcC--CCCCCceEEEECCEECCC
Confidence 0 1111111 11344 8999999998 788999999999988764
Q ss_pred CC-ceEEEeecceEEEEEccC-CCCCCeEEEEEEEeCCCCc-eeEEEEEE
Q psy8139 592 GG-RYEITHTDRYLNLRISDA-RRADRGEYQAHGVNSLGED-VASFLVTV 638 (1101)
Q Consensus 592 ~~-~~~~~~~~~~~sl~i~~l-~~~~~y~y~c~A~N~~G~~-~~s~~l~v 638 (1101)
.. ...+.. ..++|.|.++ ...|+|.|+|.|.|..|.. +....|.+
T Consensus 155 ~~~~~~~~~--~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 155 DEDDKNIGS--DEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp CTTCTTEEE--ETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ccCCceEec--CCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 31 111211 2678999999 9999999999999999963 34444443
No 238
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.46 E-value=8.4e-13 Score=141.79 Aligned_cols=172 Identities=15% Similarity=0.163 Sum_probs=120.2
Q ss_pred eeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--E---Ee----------ecCCcEEEE--ecCCeeEEEEeecC
Q psy8139 454 SFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--F---EI----------FSSRRQRIV--TDNDISTLIIHQAA 516 (1101)
Q Consensus 454 ~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~---~~----------~~~~~~~~~--~~~~~~~l~I~~l~ 516 (1101)
.+...|..+.+.+|++++|.|.+.+.|.+.+.|++.. . .+ ....++.+. ......+|.|.++.
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 3455677889999999999999999999999999832 1 11 112344442 23456689999999
Q ss_pred CCCCEEEEEEEEeCCCce----EEEEEEeecc--------------------CCccccCCCCCCCeEEeeCCEEEEEEEE
Q psy8139 517 LMDEGEIKCTATNRAGHS----ITKARLRLEA--------------------PPTIRLPKQYEDGLLFEMGEIIKLKVSM 572 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g~~----~~s~~l~V~~--------------------~p~~~~~~~~~~~~~v~~g~~~~l~c~~ 572 (1101)
..|+|.|.|.+.|..+.. ...+.|.|.. +|.+...| ....+..|++++|.|.+
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p---~~~~v~~G~~v~L~C~~ 161 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSP---RNKVTVTGENVTLSCRQ 161 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESC---SEEEEETTCCEEECEEE
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecC---CEEEEeCCCcEEEEEEc
Confidence 999999999999976532 1234666664 23333222 34467789999999999
Q ss_pred eecCCCeeEEEECC--eecC---------------CCCceEEEe-ecceEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 573 AGMPPPTARWLHNG--EPLT---------------SGGRYEITH-TDRYLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 573 ~g~p~~~v~W~~~g--~~l~---------------~~~~~~~~~-~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
.+. .+.+.|++.. .... ...++.+.. .....+|.|.++++.|+|.|+|.|.|..|.
T Consensus 162 ~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 162 TNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp CSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred CCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 887 7899999732 1110 012233222 234568999999999999999999998774
No 239
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.46 E-value=7.6e-13 Score=140.61 Aligned_cols=172 Identities=16% Similarity=0.165 Sum_probs=123.4
Q ss_pred eeecCceeEEccCCeEEEEEEEeccC----CCeEEEEECC--E---Eee---------cCCcEEEEecCCeeEEEEeecC
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIP----TPKVSWYKDG--F---EIF---------SSRRQRIVTDNDISTLIIHQAA 516 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p----~~~v~W~~~g--~---~~~---------~~~~~~~~~~~~~~~l~I~~l~ 516 (1101)
+...|.++.+.+|++++|.|.+.+.| .+.+.|+++. . .+. ...++.+...++..+|.|.++.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 45567788999999999999999988 7889999852 1 111 1245666555666789999999
Q ss_pred CCCCEEEEEEEEeCCCc-eEEEEEEeeccCCccccC---CCCCCCeEEeeCCEEEEEEEEeecC--CCeeEEEEC--Cee
Q psy8139 517 LMDEGEIKCTATNRAGH-SITKARLRLEAPPTIRLP---KQYEDGLLFEMGEIIKLKVSMAGMP--PPTARWLHN--GEP 588 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g~-~~~s~~l~V~~~p~~~~~---~~~~~~~~v~~g~~~~l~c~~~g~p--~~~v~W~~~--g~~ 588 (1101)
..|+|.|.|.|.|..+. ....+.|.|..++....+ ...+....+..|+++.|.|.+.+.| .+.+.|+++ +..
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~ 163 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQG 163 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSC
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCC
Confidence 99999999999998665 333467777765321000 0112345788899999999999887 469999985 222
Q ss_pred cC-----------------CCCceEEEee--cceEEEEEccCCCCCCeEEEEEEEeC
Q psy8139 589 LT-----------------SGGRYEITHT--DRYLNLRISDARRADRGEYQAHGVNS 626 (1101)
Q Consensus 589 l~-----------------~~~~~~~~~~--~~~~sl~i~~l~~~~~y~y~c~A~N~ 626 (1101)
.. ...++.+... ....+|.|.+++..|+|.|.|.|.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 164 LEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp CEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred cEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 10 1234444332 34578999999999999999999853
No 240
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.46 E-value=7.3e-13 Score=134.53 Aligned_cols=175 Identities=15% Similarity=0.101 Sum_probs=109.2
Q ss_pred EecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCC
Q psy8139 638 VTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGS 717 (1101)
Q Consensus 638 v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~ 717 (1101)
+...|++|.++.+..++.+++.|+|.+|. +
T Consensus 3 ~~t~p~~P~~l~~~~~~~~sv~l~W~~p~--------------------------------------------------~ 32 (186)
T 1qr4_A 3 AGTDLDNPKDLEVSDPTETTLSLRWRRPV--------------------------------------------------A 32 (186)
T ss_dssp -----CCCEEEEEESCCSSEEEEEEECCS--------------------------------------------------S
T ss_pred ccCCCcCCCceEEEecCCCEEEEEEeCCC--------------------------------------------------C
Confidence 34567888888777777777777777542 2
Q ss_pred CcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccc-
Q psy8139 718 PVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR- 796 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~- 796 (1101)
++.+|.|.|+..++ .+.... .....++++|.+|.|++.|.|+|.|.|..|.|.+ ......+ ++.+|.++.
T Consensus 33 ~i~~Y~v~~~~~~~-~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~---~~~~~~t----~p~~P~~l~~ 103 (186)
T 1qr4_A 33 KFDRYRLTYVSPSG-KKNEME-IPVDSTSFILRGLDAGTEYTISLVAEKGRHKSKP---TTIKGST----VVGSPKGISF 103 (186)
T ss_dssp CCSEEEEEEECTTC-CEEEEE-ECTTCSEEEEESCCSSCEEEEEEEEESSSCBCCC---EEEEEEC----CCCCCSCEEE
T ss_pred CccEEEEEEEeCCC-CeeEEE-CCCCCCEEEECCCCCCCEEEEEEEEEcCCccCCC---EEEEEEC----CCCCCCccEE
Confidence 46677777774432 233222 2256789999999999999999999998776543 3233322 244554544
Q ss_pred -cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeeccccccCCCCCC
Q psy8139 797 -ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVETNEHTGTGAPSD 875 (1101)
Q Consensus 797 -~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~~~~~~~~~~ 875 (1101)
...++++.+.|.+|. +++. .|.|.|+..+. ..+....+. +......
T Consensus 104 ~~~~~~sv~l~W~~p~---------------~~i~------------~Y~v~~~~~~~-~~~~~~~~~-----~~~~~~~ 150 (186)
T 1qr4_A 104 SDITENSATVSWTPPR---------------SRVD------------SYRVSYVPITG-GTPNVVTVD-----GSKTRTK 150 (186)
T ss_dssp ESCCSSCEEEEECCCS---------------SCCS------------EEEEEEEETTC-CCCEEEEEE-----TTCCEEE
T ss_pred EEeCCCEEEEEEECCC---------------Cccc------------EEEEEEEeCCC-CCceEEEcC-----CCcCEEE
Confidence 456677888897742 3345 89998887664 334433332 2223334
Q ss_pred CCCccCcccce--eeccccccc--CceeecccC
Q psy8139 876 NENESDYFPEK--TIDESVYGY--DTIVYGYDS 904 (1101)
Q Consensus 876 l~~~~~~t~Y~--V~a~n~~G~--~~~v~~~t~ 904 (1101)
+.+|.+.+.|. |+|.|..|. +......|.
T Consensus 151 i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 183 (186)
T 1qr4_A 151 LVKLVPGVDYNVNIISVKGFEESEPISGILKTA 183 (186)
T ss_dssp ECSCCSSCEEEEEEEEEETTEECCCEEEEEEC-
T ss_pred EcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEec
Confidence 44455999999 999999887 444444443
No 241
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.45 E-value=1e-12 Score=141.22 Aligned_cols=180 Identities=12% Similarity=0.129 Sum_probs=124.8
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E---Ee--------------ecCCcEEEEec--CCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F---EI--------------FSSRRQRIVTD--NDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~---~~--------------~~~~~~~~~~~--~~~~~l~I~~l 515 (1101)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. . .+ ....++.+... .+..+|+|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3446689999999999998866 6789998732 1 11 01245555433 34567999999
Q ss_pred CCCCCEEEEEEEEeC----CCceEEEEEEeecc----------------CCccccCCCCCCCeEEeeCCEEEEEEEEeec
Q psy8139 516 ALMDEGEIKCTATNR----AGHSITKARLRLEA----------------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM 575 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~----~g~~~~s~~l~V~~----------------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~ 575 (1101)
..+|+|.|.|.+.|. .+.....+.|.|.. +|.+...| ..+.+..|++++|.|.+.+.
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~v~~G~~v~L~C~~~~~ 165 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP---SSLSASLGERVSITCRASQD 165 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC---SEEEECTTCCEEEEEEESSC
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC---CeEEEECCCCEEEEEEEecC
Confidence 999999999999987 22233346677764 33332222 24578899999999999999
Q ss_pred CCCeeEEEEC--CeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc-eeEEEEEEec
Q psy8139 576 PPPTARWLHN--GEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED-VASFLVTVTD 640 (1101)
Q Consensus 576 p~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~-~~s~~l~v~~ 640 (1101)
+.+.+.|++. +.... ...++.....+...+|+|.++...|+|.|.|.|.|..+.. .....|.|..
T Consensus 166 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~ 245 (256)
T 3umt_A 166 IGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKR 245 (256)
T ss_dssp CTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEEC
Confidence 9899999983 22111 1245665556667789999999999999999999865432 2245566664
Q ss_pred C
Q psy8139 641 R 641 (1101)
Q Consensus 641 ~ 641 (1101)
.
T Consensus 246 ~ 246 (256)
T 3umt_A 246 A 246 (256)
T ss_dssp -
T ss_pred C
Confidence 3
No 242
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.45 E-value=5.7e-14 Score=146.17 Aligned_cols=168 Identities=15% Similarity=0.187 Sum_probs=118.4
Q ss_pred CceeEEccCCeEEEEEEEeccCCCeEEEEEC--CEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIK 524 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~ 524 (1101)
|..+.+..|++++|.|.+.+.|.+.+.|+++ +..+. ...++.+...++...|.|.++...|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 6677899999999999999988889999984 32221 134566665666779999999999999999
Q ss_pred EEEEeCCCce---EEEEEEeec----cCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCeecCCCCce
Q psy8139 525 CTATNRAGHS---ITKARLRLE----APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGEPLTSGGRY 595 (1101)
Q Consensus 525 C~a~n~~g~~---~~s~~l~V~----~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~~l~~~~~~ 595 (1101)
|.|.|..+.. .....|.|. .+|.+...+. ...+..|+.+.|.|.+.|. |. +.+.|+++|..+..+...
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~---~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 162 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPP---SPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKT 162 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCC---CHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCC---chHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeec
Confidence 9999732221 123456663 3444433221 1123468899999999987 54 799999999887643211
Q ss_pred E-EEeec----ceEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 596 E-ITHTD----RYLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 596 ~-~~~~~----~~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
. ....+ ..+.|.|.++...|.|.|+|.|.|..+.
T Consensus 163 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 163 TKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred CCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 0 00001 1345889999999999999999998775
No 243
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.45 E-value=1.8e-12 Score=138.36 Aligned_cols=170 Identities=14% Similarity=0.194 Sum_probs=120.3
Q ss_pred eeecCceeEEccCCeEEEEEEEeccC-----CCeEEEEECC--E--E-ee---------cCCcEEEEecCCeeEEEEeec
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIP-----TPKVSWYKDG--F--E-IF---------SSRRQRIVTDNDISTLIIHQA 515 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p-----~~~v~W~~~g--~--~-~~---------~~~~~~~~~~~~~~~l~I~~l 515 (1101)
+...|.++.+.+|++++|.|.+.+.| .+.+.|+++. . . +. ...++.+...++..+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 45567788999999999999999888 6899999842 1 1 11 134566655566678999999
Q ss_pred CCCCCEEEEEEEEeCCCceE-EEEEEeeccCCc------------cccCCCCCCCeEEeeCCEEEEEEEEeecC--CCee
Q psy8139 516 ALMDEGEIKCTATNRAGHSI-TKARLRLEAPPT------------IRLPKQYEDGLLFEMGEIIKLKVSMAGMP--PPTA 580 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~g~~~-~s~~l~V~~~p~------------~~~~~~~~~~~~v~~g~~~~l~c~~~g~p--~~~v 580 (1101)
...|+|.|.|.+.|..+... ..+.|.|..++. +.. .......+..|++++|.|.+.+.+ .+.+
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 161 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQL--QQSGPELKKPGETVKISCKATNYAFTDYSM 161 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEE--EECCCEEECTTCCEEEEEEEESSCGGGSCE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEE--eCCCceeecCCCcEEEEEEEcCcccCCcEE
Confidence 99999999999998765422 235677776532 111 011223588899999999999875 5799
Q ss_pred EEEECC--eec------C-----------CCCceEEEe--ecceEEEEEccCCCCCCeEEEEEEEeC
Q psy8139 581 RWLHNG--EPL------T-----------SGGRYEITH--TDRYLNLRISDARRADRGEYQAHGVNS 626 (1101)
Q Consensus 581 ~W~~~g--~~l------~-----------~~~~~~~~~--~~~~~sl~i~~l~~~~~y~y~c~A~N~ 626 (1101)
.|++++ ... . ...++.+.. .....+|.|.++...|+|.|.|.|.|.
T Consensus 162 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 162 HWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 999853 111 0 123444443 334678999999999999999999995
No 244
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.45 E-value=3.7e-13 Score=140.47 Aligned_cols=170 Identities=13% Similarity=0.081 Sum_probs=116.1
Q ss_pred CceeEEccCCeEEEEEEE-eccC-CCeEEEEECC--EEe---e---------cCCcEEEEecCCeeEEEEeecCCCCCEE
Q psy8139 459 LHDTTALEDEKVEFTVQV-EGIP-TPKVSWYKDG--FEI---F---------SSRRQRIVTDNDISTLIIHQAALMDEGE 522 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~-~g~p-~~~v~W~~~g--~~~---~---------~~~~~~~~~~~~~~~l~I~~l~~~d~g~ 522 (1101)
|..+.+..|++++|.|.+ .+.+ .+.+.|++++ ..+ . ...++.+...++..+|.|.++...|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 566789999999999995 4443 5789999843 111 0 1245666555667799999999999999
Q ss_pred EEEEEEeCCCc--eEEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEEECCeecCCCCce
Q psy8139 523 IKCTATNRAGH--SITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWLHNGEPLTSGGRY 595 (1101)
Q Consensus 523 Y~C~a~n~~g~--~~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~~g~~l~~~~~~ 595 (1101)
|.|.|.|..+. ......|.|.. +|.+...+.. .....|+.+.|.|.+.| .|.+ .+.|+++|..+..+...
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~---~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 163 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPS---DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE 163 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCC---HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEE
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCC---hhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeE
Confidence 99999998761 12234566653 3443321110 01124889999999998 4554 89999999987654111
Q ss_pred --EEEeec-----ceEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 596 --EITHTD-----RYLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 596 --~~~~~~-----~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
...... ..+.|.|......|.|.|+|.|.|......
T Consensus 164 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 164 SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred ecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 111111 124788999999999999999999876543
No 245
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.45 E-value=5.9e-13 Score=139.22 Aligned_cols=173 Identities=12% Similarity=0.125 Sum_probs=114.9
Q ss_pred cCceeEEccCCeEEEEEEEeccC--CCeEEEEEC--CEEee-----------------cCCcEEEEec--CCeeEEEEee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKD--GFEIF-----------------SSRRQRIVTD--NDISTLIIHQ 514 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~l~I~~ 514 (1101)
.|..+.+..|++++|.|.+.+.| .+.+.|+++ +..+. ...++.+... .+..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 35566789999999999999865 678999986 32211 1245555432 3456899999
Q ss_pred cCCCCCEEEEEEEEeCCCce----EEEEEEeeccC----CccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEEE
Q psy8139 515 AALMDEGEIKCTATNRAGHS----ITKARLRLEAP----PTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWLH 584 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g~~----~~s~~l~V~~~----p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~ 584 (1101)
+...|+|.|.|.+.|..+.. ...+.|.|... |.+...+.. ..+..|+.+.|.|.+.| .|.| .+.|++
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~---~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 162 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPG---SAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCC---SSSCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCc---cccccCCeEEEEEEcccccCCCeEEEEEe
Confidence 99999999999999987422 12456777653 333211111 12356999999999998 8888 999999
Q ss_pred CCeecCCCCceEEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEE
Q psy8139 585 NGEPLTSGGRYEITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASF 634 (1101)
Q Consensus 585 ~g~~l~~~~~~~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~ 634 (1101)
+|..+...........+ ..+.|.|.... .+.|.|+|.|.|..|......
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~~ 214 (219)
T 1c1e_H 163 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVDK 214 (219)
T ss_dssp GTBCTTEEECCCEESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEEE
T ss_pred CCcccceEecCCcccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEEE
Confidence 98764311000000111 13467884444 456999999999888754443
No 246
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.45 E-value=6.8e-13 Score=138.12 Aligned_cols=168 Identities=20% Similarity=0.223 Sum_probs=116.9
Q ss_pred ecCceeEEccCCeEEEEEEEecc-------CCCeEEEEECCEE------ee-----------cCCcEEEEec--CCeeEE
Q psy8139 457 RALHDTTALEDEKVEFTVQVEGI-------PTPKVSWYKDGFE------IF-----------SSRRQRIVTD--NDISTL 510 (1101)
Q Consensus 457 ~~p~~~~v~~g~~v~L~C~~~g~-------p~~~v~W~~~g~~------~~-----------~~~~~~~~~~--~~~~~l 510 (1101)
..|..+.+.+|++++|.|.+.+. +.+.+.|++++.. +. ...++.+..+ .+..+|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 45677889999999999998864 5678999997642 11 1134444321 234479
Q ss_pred EEeecCCCCCEEEEEEEEeCCCceE----EEEEEeeccCC---ccccCCCCCCCeEEeeCCEEEEEEEEeec----CCCe
Q psy8139 511 IIHQAALMDEGEIKCTATNRAGHSI----TKARLRLEAPP---TIRLPKQYEDGLLFEMGEIIKLKVSMAGM----PPPT 579 (1101)
Q Consensus 511 ~I~~l~~~d~g~Y~C~a~n~~g~~~----~s~~l~V~~~p---~~~~~~~~~~~~~v~~g~~~~l~c~~~g~----p~~~ 579 (1101)
.|.++...|+|.|.|.+.+..+... ....|.|..++ .+..+. .+..|+.++|.|.+.+. |.|.
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~------~~~~G~~v~L~C~~~~~~~~~p~p~ 158 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLE------PLESGRPTRLSCSLPGSCEAGPPLT 158 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--C------CCCTTCCEEEEEECTTCCSCSSCCE
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCc------cccCCCeEEEEEEeccCCCCCCCce
Confidence 9999999999999999999764322 35677777643 332211 24579999999999874 7899
Q ss_pred eEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 580 ARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 580 v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
+.|++++...... . ....+.|.|..+...+.|.|+|.|.|..|.......+
T Consensus 159 v~W~~~~~~~~~~-~-----~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v 209 (214)
T 2zg1_A 159 FSWTGNALSPLDP-E-----TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTV 209 (214)
T ss_dssp EEEESSTTSSSCS-S-----CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEE
T ss_pred EEEeCCCCccCCC-C-----ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEE
Confidence 9999988654321 1 1235679999999899999999999987654444433
No 247
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.45 E-value=5.1e-13 Score=134.42 Aligned_cols=158 Identities=11% Similarity=0.114 Sum_probs=113.1
Q ss_pred CceeEEccCCeEEEEEEEe--ccCCCeEEEEE--CCEEe----------ecCCcEEEEecCCeeEEEEeecCCCCCEEEE
Q psy8139 459 LHDTTALEDEKVEFTVQVE--GIPTPKVSWYK--DGFEI----------FSSRRQRIVTDNDISTLIIHQAALMDEGEIK 524 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~--g~p~~~v~W~~--~g~~~----------~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~ 524 (1101)
+..+....|++++|.|... +.+.+.|.|++ ++..+ ....++.+..++ +|.|.++...|+|.|+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~ 82 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYK 82 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEE
Confidence 3456678999999999542 34567899999 88766 234566655333 8999999999999999
Q ss_pred EEEEeCCCceEE--EEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecc
Q psy8139 525 CTATNRAGHSIT--KARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDR 602 (1101)
Q Consensus 525 C~a~n~~g~~~~--s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~ 602 (1101)
|.+.|..|.... ...|.|..+... |. ....+..+.|.|.+.+.|.+.+.|+++|..+ .+ .
T Consensus 83 c~~~n~~g~~~~~~~~~L~V~~~~~~---P~-----i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~---------~ 144 (182)
T 1hnf_A 83 VSIYDTKGKNVLEKIFDLKIQERVSK---PK-----ISWTCINTTLTCEVMNGTDPELNLYQDGKHL-KL---------S 144 (182)
T ss_dssp EEEEETTSCEEEEEEEEEEEECCCCC---CE-----EEEETTTTEEEEECSSCSSCEEEEEESSCEE-EE---------E
T ss_pred EEEEeCCCceeEEEEEEEEEcCcCCC---CE-----EEEccCcEEEEeEccCCCCCEEEEEECCEEC-CC---------C
Confidence 999999887643 456777653211 10 1223446889999999999999999999876 11 1
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
...+.+. ....|.|.|+|.|.|..|.......+..
T Consensus 145 ~~~i~~~-~~~~d~G~Y~C~a~N~~~~~~s~~~~~c 179 (182)
T 1hnf_A 145 QRVITHK-WTTSLSAKFKCTAGNKVSKESSVEPVSC 179 (182)
T ss_dssp SSCEEEE-CCSCEEEEEEEEEECSSCEEEEEEEEEE
T ss_pred CcEEEEe-cccCCCcEEEEEEEeCCCCcEEcceecC
Confidence 1223332 2467999999999999998777665543
No 248
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.44 E-value=5.6e-13 Score=142.32 Aligned_cols=185 Identities=13% Similarity=0.082 Sum_probs=124.7
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcE-EEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQ-RIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~-~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
..+|.+...|. ..+..|++++|.|.+.+ +.+.+.|+++|..+...... ..........|.|.++...|+|.|+|.+.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 35677776675 67889999999999975 56789999987643211000 00012234589999999999999999998
Q ss_pred eCCC-----ceEEEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEE-e
Q psy8139 529 NRAG-----HSITKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEIT-H 599 (1101)
Q Consensus 529 n~~g-----~~~~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~-~ 599 (1101)
|..+ ..+....|.|.. +|.+...+. ..+.+|++++|.|.+.+. .+.+.|+++|..+......... .
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~----~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~ 157 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG----PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVN 157 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC----TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSS
T ss_pred ccCCCccccccCCCEEEecccCCCCcceEccCC----CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccC
Confidence 6432 123346677764 344443332 146789999999998876 4799999999776533221111 1
Q ss_pred ecceEEEEEccCCCCCCeEEEEEEEeCCC-----CceeEEEEEEecCCC
Q psy8139 600 TDRYLNLRISDARRADRGEYQAHGVNSLG-----EDVASFLVTVTDRPL 643 (1101)
Q Consensus 600 ~~~~~sl~i~~l~~~~~y~y~c~A~N~~G-----~~~~s~~l~v~~~P~ 643 (1101)
...+..|.|.+++ |.|.|+|.|.|..+ ..+....|.|.+.|.
T Consensus 158 ~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 158 GTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp SCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred CceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 1236789999998 99999999997643 123456677776653
No 249
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.44 E-value=1.7e-12 Score=134.76 Aligned_cols=135 Identities=16% Similarity=0.180 Sum_probs=107.6
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEecc-----------------CCCCCCeeeecCceeEEccCC
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR-----------------SPAAAPSFIRALHDTTALEDE 468 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~-----------------~~~~~P~~~~~p~~~~v~~g~ 468 (1101)
..|.|.++++.|+|.|+|.|.|..|... ..+.+.+.. ....++.+...|....+..|+
T Consensus 59 ~~L~i~~v~~~D~G~Y~C~~~n~~~~~~-----~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 133 (212)
T 2r15_A 59 IWLQINEPTPNDKGKYVMELFDGKTGHQ-----KTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGK 133 (212)
T ss_dssp EEEEEESCCGGGCEEEEEEEECSSCEEE-----EEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTC
T ss_pred EEEEECCCCcccCEEEEEEEecCCcceE-----EEEEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCC
Confidence 4699999999999999999999766432 123332210 011333444556778899999
Q ss_pred eEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEec-CCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccC
Q psy8139 469 KVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTD-NDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAP 545 (1101)
Q Consensus 469 ~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~-~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~ 545 (1101)
.+.|.|.+.|.|.|.+.|++++..+....++.+... +....|.|.++...|.|.|+|.|.|..|.......|.|..|
T Consensus 134 ~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 134 ALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp CEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred eEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 999999999999999999999999988777777665 66679999999999999999999999999888888888643
No 250
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.44 E-value=2.4e-13 Score=139.74 Aligned_cols=123 Identities=10% Similarity=0.003 Sum_probs=94.6
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
...|.|.++++.|+|.|+|.|.|..|... ..+.+.+. .||.+...+.+..+.+|++++|.|.+.|.|.|.|
T Consensus 68 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-----~~~~l~V~----~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v 138 (203)
T 4fa8_A 68 TFFLVVTAANISHDGNYLCRMKLGETEVT-----KQEHLSVV----KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHV 138 (203)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEE-----EEEEEEEE----EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEE
T ss_pred EEEEEEccCCHHHCeEEEEEEEcCCCcEE-----EEEEEEec----CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEE
Confidence 35799999999999999999999877543 22444443 4677777788888999999999999999999999
Q ss_pred EEEECCEEee----cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE
Q psy8139 485 SWYKDGFEIF----SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT 536 (1101)
Q Consensus 485 ~W~~~g~~~~----~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~ 536 (1101)
+|++++..+. ...++.+..++....+.|.++...|+|.|+|.|.|..|....
T Consensus 139 ~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 139 QWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp EECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 9998765432 234455555555556777899999999999999999998764
No 251
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.44 E-value=9.8e-13 Score=142.54 Aligned_cols=200 Identities=18% Similarity=0.165 Sum_probs=113.6
Q ss_pred cCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEEC--CE
Q psy8139 414 EPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GF 491 (1101)
Q Consensus 414 ~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~ 491 (1101)
...+.+.|.|.|.|..|....+ ....+...|..+.+.+|++++|.|.+.+ +.+.+.|++. +.
T Consensus 4 ~~~~~~~y~~~~~~~~g~~~~~---------------~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~ 67 (270)
T 3qib_D 4 ERADLIAYLKQATKGGGGSGGG---------------GGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNN 67 (270)
T ss_dssp ---------------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTC
T ss_pred hhhhHHHHHHHHhccCCccccc---------------cceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCC
Confidence 4567888999999987754322 2334556677889999999999999876 6789999982 21
Q ss_pred E---e---------ecC---C-cEEEEe-cCCeeEEEEeecCCCCCEEEEEEEEeCCC----ceEEEEEEeecc------
Q psy8139 492 E---I---------FSS---R-RQRIVT-DNDISTLIIHQAALMDEGEIKCTATNRAG----HSITKARLRLEA------ 544 (1101)
Q Consensus 492 ~---~---------~~~---~-~~~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g----~~~~s~~l~V~~------ 544 (1101)
. + ... . ++.+.. ..+..+|.|.+++..|+|.|.|.+.+..+ .......|.|..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~ 147 (270)
T 3qib_D 68 EFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVF 147 (270)
T ss_dssp CEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCB
T ss_pred CcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcccccccc
Confidence 1 0 000 0 444443 23456899999999999999999997432 222234666665
Q ss_pred CCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEEECCeecCCCCceEE------E--eecc---eEEEEEccC
Q psy8139 545 PPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWLHNGEPLTSGGRYEI------T--HTDR---YLNLRISDA 611 (1101)
Q Consensus 545 ~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~~g~~l~~~~~~~~------~--~~~~---~~sl~i~~l 611 (1101)
+|.+...+. ....+..|..++|.|.+.+ .|.+ .+.|+++|..+..+..... . ..+. ...+.|...
T Consensus 148 ~P~v~~~~~--~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~ 225 (270)
T 3qib_D 148 PPEVAVFEP--SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSAT 225 (270)
T ss_dssp CCEEEEEEC--CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHH
T ss_pred CCceEEECC--CccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHH
Confidence 232211000 0111234899999999998 6656 8999999988865321110 0 0000 245677776
Q ss_pred CCCC-CeEEEEEEEeCCCCce
Q psy8139 612 RRAD-RGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 612 ~~~~-~y~y~c~A~N~~G~~~ 631 (1101)
...| .|.|+|.|.|......
T Consensus 226 ~~~d~~g~YtC~v~~~~l~~~ 246 (270)
T 3qib_D 226 FWQNPRNHFRCQVQFYGLSEN 246 (270)
T ss_dssp HHHSTTCEEEEEEEECCBCTT
T ss_pred HhccCCCeEEEEEEecCCCCc
Confidence 6666 8999999999866543
No 252
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.44 E-value=3.4e-11 Score=138.28 Aligned_cols=260 Identities=11% Similarity=0.068 Sum_probs=158.9
Q ss_pred CCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCC--CCeEEEEEEEeCCCCceeE
Q psy8139 556 DGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRA--DRGEYQAHGVNSLGEDVAS 633 (1101)
Q Consensus 556 ~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~--~~y~y~c~A~N~~G~~~~s 633 (1101)
....+..|.++++.|..... ......++ ..............+++.|+... ..-+|.|.. ......
T Consensus 206 ~~~vv~~GS~vt~~Ci~~~~---~~~~~l~~-----~~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~----~~~~~g 273 (483)
T 3e0g_A 206 QDKVILVGSDITFCCVSQEK---VLSALIGH-----TNCPLIHLDGENVAIKIRNISVSASSGTNVVFTT----EDNIFG 273 (483)
T ss_dssp CSEEEETTCCEEEEECCSSC---EEEEESSS-----CCBCCEECSSSCEEEEECSCCCCCSSCEEEEEEE----SSCEEE
T ss_pred cCCEEeCCCCEEEEEEeCcc---ccceecCc-----ccceeEEecCCEEEEEEeCCCCccCccceEEEec----CCcccc
Confidence 34478899999999987631 22222221 11111223444677888888763 345688874 123456
Q ss_pred EEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCC--CcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCC
Q psy8139 634 FLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDG--GCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPP 711 (1101)
Q Consensus 634 ~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~--g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP 711 (1101)
..+.+..+|++|.++.......++++++|+++.+.+ |...+
T Consensus 274 ~~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t------------------------------------- 316 (483)
T 3e0g_A 274 TVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRAT------------------------------------- 316 (483)
T ss_dssp EEEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCC-------------------------------------
T ss_pred eEEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCe-------------------------------------
Confidence 678888999999999888777788999999765442 22244
Q ss_pred CCCCCCCcceEEEEEEeCCCCCceeecc---cccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCC
Q psy8139 712 EYDGGSPVLGYLVEHRRTGSPYWVRASP---HMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSP 788 (1101)
Q Consensus 712 ~~~~~~~i~~Y~V~~~~~~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P 788 (1101)
.|.|.|+..+. ...... ..+....+.+.+|.+.+.|.|+|.|.|..|.+. |. .........+
T Consensus 317 ---------~YtL~y~~~g~--~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~-S~---~~~~~~~~Vk 381 (483)
T 3e0g_A 317 ---------SYTLVESFSGK--YVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQ-ST---ILVNITEKVY 381 (483)
T ss_dssp ---------EEEEEETTTCC--EEEECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCEEE-EE---EEECGGGGBC
T ss_pred ---------eEEEEEEECCC--CccccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcc-cc---eEEEeccccC
Confidence 44444443221 111111 013456789999999999999999999999865 22 2222234567
Q ss_pred CCCCcccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeeeccc
Q psy8139 789 AAAPSFIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVETNE 866 (1101)
Q Consensus 789 ~~~p~~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~~~~ 866 (1101)
+.||.++. ...++...+.|.+|.. .++..+ .|.|.|+..+....|....+...
T Consensus 382 P~PP~nl~v~~~~stsl~LsW~~P~~------------~~~~~L------------~YeVrYr~~~~~~~~~~vsv~~~- 436 (483)
T 3e0g_A 382 PHTPTSFKVKDINSTAVKLSWHLPGN------------FAKINF------------LCEIEIKKSNSVQEQRNVTIQGV- 436 (483)
T ss_dssp CCCCEEEEECCSSSSSCCEEEECCSC------------CTTSBC------------CCEEEEECSSSCCCEEECCCBCC-
T ss_pred CCCCeeeEEEEecCCeEEEEECCCCC------------CCCceE------------EEEEEEEECCCCCceEEEEEecc-
Confidence 78888776 3355677788887532 122334 89999998875545554333110
Q ss_pred cccCCCCCCCCCccCcccce--eeccccccc------CceeecccCCC
Q psy8139 867 HTGTGAPSDNENESDYFPEK--TIDESVYGY------DTIVYGYDSDD 906 (1101)
Q Consensus 867 ~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~------~~~v~~~t~e~ 906 (1101)
........+.+|.+++.|. |+|. ..|. |..+...|.|+
T Consensus 437 -~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 437 -ENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp -SSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred -CCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence 0011123466667999999 8888 4442 55555555543
No 253
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.44 E-value=1.1e-12 Score=134.94 Aligned_cols=158 Identities=15% Similarity=0.123 Sum_probs=105.2
Q ss_pred CceEEEEeeCCCCCCCCCcceEEEEEEeCCC-CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCc
Q psy8139 701 RDVFTIRWEPPEYDGGSPVLGYLVEHRRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEP 779 (1101)
Q Consensus 701 ~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~ 779 (1101)
++++.|+|.+| +++++.+|.|+|+..+. ..|..... ....++++|.+|.|++.|.|+|.|.|..|.|.++. ..+
T Consensus 15 ~~si~l~W~~p---~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~-~~~ 89 (201)
T 2ha1_A 15 PNSHPIQWNAP---QPSHISKYILRWRPKNSVGRWKEATI-PGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTR-FDF 89 (201)
T ss_dssp SSCEEEEEECC---SSTTCCEEEEEEEETTCSSCCEEEEE-CTTCCEEEECSCCTTEEEEEEEEEECTTSCEEEEE-EEE
T ss_pred CCEEEEEEeCC---CCCCceEEEEEEEECCCCCceEEEec-CCCccEEEecCCCCCCEEEEEEEEEecccccCcee-EEE
Confidence 89999999998 35679999999998654 45665443 25678999999999999999999999999976531 111
Q ss_pred EEe---------cCCCCCCCCCc----ccc--cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeE
Q psy8139 780 LTV---------TYQRSPAAAPS----FIR--ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIET 844 (1101)
Q Consensus 780 ~t~---------~~~~~P~~~p~----~~~--~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y 844 (1101)
.+. .....|..+|. .+. ...++++.+.|.+|. +++. +|
T Consensus 90 ~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~---------------~~i~------------~Y 142 (201)
T 2ha1_A 90 TTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSAS---------------DTVS------------GF 142 (201)
T ss_dssp EECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSC---------------TTEE------------EE
T ss_pred ecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCCC---------------CCcc------------EE
Confidence 110 00122334332 222 445677888897751 2444 89
Q ss_pred EeeeeccCCCCCCceeeeeccccccCCCCCCCCCccCcccce--eeccccccc
Q psy8139 845 ISSFRDKYVDNEDDYDIVETNEHTGTGAPSDNENESDYFPEK--TIDESVYGY 895 (1101)
Q Consensus 845 ~v~~r~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~ 895 (1101)
.|.|+....+.......+.. ......+.+|.+.+.|. |+|.|..|.
T Consensus 143 ~v~~~~~~~~~~~~~~~v~~-----~~~~~~i~~L~p~t~Y~~~V~A~~~~G~ 190 (201)
T 2ha1_A 143 RVEYELSEEGDEPQYLDLPS-----TATSVNIPDLLPGRKYIVNVYQISEDGE 190 (201)
T ss_dssp EEEEEETTTCCCCEEEEEET-----TCCEEEECSCCTTCEEEEEEEEEETTSC
T ss_pred EEEEEECCCCCceeEEEcCC-----ceeEEEeCCCCCCCEEEEEEEEEcCCCC
Confidence 99888654333223333322 22223444455999999 999999998
No 254
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.43 E-value=4.3e-12 Score=128.82 Aligned_cols=122 Identities=16% Similarity=0.062 Sum_probs=95.0
Q ss_pred ecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEE
Q psy8139 600 TDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVE 679 (1101)
Q Consensus 600 ~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~ 679 (1101)
.....++.|.+|.+++.|.|+|.|.|..|.+. ...+.+...|.+|.++.+...+.+++.|+|.+|.
T Consensus 54 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~-~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~------------- 119 (186)
T 1qr4_A 54 PVDSTSFILRGLDAGTEYTISLVAEKGRHKSK-PTTIKGSTVVGSPKGISFSDITENSATVSWTPPR------------- 119 (186)
T ss_dssp CTTCSEEEEESCCSSCEEEEEEEEESSSCBCC-CEEEEEECCCCCCSCEEEESCCSSCEEEEECCCS-------------
T ss_pred CCCCCEEEECCCCCCCEEEEEEEEEcCCccCC-CEEEEEECCCCCCCccEEEEeCCCEEEEEEECCC-------------
Confidence 34467899999999999999999999755543 4566667788999988887777777777777542
Q ss_pred EEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEE
Q psy8139 680 YFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQ 759 (1101)
Q Consensus 680 ~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 759 (1101)
+++.+|.|.|+..++..+..... ....++++|.+|.|++.|.
T Consensus 120 -------------------------------------~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~ 161 (186)
T 1qr4_A 120 -------------------------------------SRVDSYRVSYVPITGGTPNVVTV-DGSKTRTKLVKLVPGVDYN 161 (186)
T ss_dssp -------------------------------------SCCSEEEEEEEETTCCCCEEEEE-ETTCCEEEECSCCSSCEEE
T ss_pred -------------------------------------CcccEEEEEEEeCCCCCceEEEc-CCCcCEEEEcCCCCCCEEE
Confidence 24778888888776544443332 2577899999999999999
Q ss_pred EEEEEEcCCccCCC
Q psy8139 760 FRITAENVVGFSEP 773 (1101)
Q Consensus 760 ~~V~A~n~~G~g~~ 773 (1101)
|+|.|.|..|.|++
T Consensus 162 ~~V~A~~~~g~s~p 175 (186)
T 1qr4_A 162 VNIISVKGFEESEP 175 (186)
T ss_dssp EEEEEEETTEECCC
T ss_pred EEEEEEcCCCcCcC
Confidence 99999999998665
No 255
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.43 E-value=5.4e-13 Score=122.24 Aligned_cols=104 Identities=29% Similarity=0.398 Sum_probs=82.8
Q ss_pred CCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEE
Q psy8139 684 PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRIT 763 (1101)
Q Consensus 684 ~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 763 (1101)
..+|++|..+.....++.+++.|+|++|..+++++|++|.|+|+..+...|..+.. ...+.++|.+|.|++.|.|+|+
T Consensus 6 ~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~frV~ 83 (110)
T 2crz_A 6 SGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ--GSEVECTVSSLLPGKTYSFRLR 83 (110)
T ss_dssp CCCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE--ESCSEEEEESCCTTCEEEECCE
T ss_pred CCCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEe--CCcEEEEECCcCCCCEEEEEEE
Confidence 34555555443334577899999999998888899999999999888778987764 6789999999999999999999
Q ss_pred EEcCCccCCCCCCCCcEEecCCCCCCCCC
Q psy8139 764 AENVVGFSEPGPLSEPLTVTYQRSPAAAP 792 (1101)
Q Consensus 764 A~n~~G~g~~S~~s~~~t~~~~~~P~~~p 792 (1101)
|.|..|.|++|..+.+.|. ..|+.+|
T Consensus 84 A~n~~G~g~~S~~~~~~T~---~~~P~~P 109 (110)
T 2crz_A 84 AANKMGFGPFSEKCDITTA---PGSGPSS 109 (110)
T ss_dssp EECSSCBCCCCCCEEEECC---CSCCCCC
T ss_pred EEcCCccCCCCCccccccC---CCCCCCC
Confidence 9999999998876655544 3444444
No 256
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.43 E-value=1.1e-12 Score=140.05 Aligned_cols=175 Identities=16% Similarity=0.168 Sum_probs=118.7
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEE----------------CCEEeecC---CcEEEEe-cCCeeEEEEee
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYK----------------DGFEIFSS---RRQRIVT-DNDISTLIIHQ 514 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~----------------~g~~~~~~---~~~~~~~-~~~~~~l~I~~ 514 (1101)
+...|..+.+.+|++++|.|.+.+.|.+.+.|++ ++...... .++.+.. ..+..+|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 4556778889999999999999999999999998 22222211 4555543 24566899999
Q ss_pred cCCCCCEEEEEEEEeCCCc----eEEEEEEeecc------CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC--eeEE
Q psy8139 515 AALMDEGEIKCTATNRAGH----SITKARLRLEA------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP--TARW 582 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g~----~~~s~~l~V~~------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~--~v~W 582 (1101)
+...|+|.|.|.+.+..+. ......|.|.. +|.+.... +....+..|..+.|.|.+.|.+++ .+.|
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~--~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 161 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFE--PSEAEISHTQKATLVCLATGFYPDHVELSW 161 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEEC--CCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeec--CCchhccCCCcEEEEEEEccCcCCceEEEE
Confidence 9999999999999986542 11234566654 33221110 011123358999999999987654 8999
Q ss_pred EECCeecCCCCceEEEe-------ecc----eEEEEEccCCCCC-CeEEEEEEEeCCCCce
Q psy8139 583 LHNGEPLTSGGRYEITH-------TDR----YLNLRISDARRAD-RGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 583 ~~~g~~l~~~~~~~~~~-------~~~----~~sl~i~~l~~~~-~y~y~c~A~N~~G~~~ 631 (1101)
+++|..+..+....... .++ ...|.|......| .|.|+|.|.|......
T Consensus 162 ~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 162 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 99998886532211100 011 2347788777777 9999999999876554
No 257
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.43 E-value=6.2e-13 Score=142.50 Aligned_cols=176 Identities=11% Similarity=0.116 Sum_probs=121.5
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccC-----CCeEEEEECC--E---Eee---------cCCcEEEEecCCeeEEEE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIP-----TPKVSWYKDG--F---EIF---------SSRRQRIVTDNDISTLII 512 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p-----~~~v~W~~~g--~---~~~---------~~~~~~~~~~~~~~~l~I 512 (1101)
.+.+...|..+.+..|++++|.|.+.+.| .+.+.|++++ . .+. ...++.+...++..+|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 34455667888999999999999999887 6899999853 1 111 124566655566779999
Q ss_pred eecCCCCCEEEEEEEEeCCCceE-EEEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEEECC
Q psy8139 513 HQAALMDEGEIKCTATNRAGHSI-TKARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWLHNG 586 (1101)
Q Consensus 513 ~~l~~~d~g~Y~C~a~n~~g~~~-~s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~~~g 586 (1101)
.++...|+|.|.|.+.|..+... ....|.|.. +|.+...+.. ..+..|+.+.|.|.+.|. |.+ .+.|+++|
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~---~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g 190 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPS---SEQLTSGGASVVCFLNNFYPKDINVKWKIDG 190 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCC---HHHHHHTEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCC---hhhcCCCcEEEEEEEeeEeCCCcEEEEEECC
Confidence 99999999999999998765432 234566654 3433321110 012358899999999984 443 79999999
Q ss_pred eecCCCCce--EEEeec-----ceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 587 EPLTSGGRY--EITHTD-----RYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 587 ~~l~~~~~~--~~~~~~-----~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
..+..+... ...... ....|.|..+...|.|.|+|.|.|.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 191 SERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred eecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 887644111 011011 13468899998889999999999976543
No 258
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.43 E-value=9.7e-13 Score=134.89 Aligned_cols=133 Identities=17% Similarity=0.280 Sum_probs=106.6
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCC-CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSP-AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~-~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
..|.|.+++..|.|.|+|.|.|..|... ..+.+.+...+ ...|.+...+....+..|+.+.|.|.+.|.|.+.+
T Consensus 62 ~~L~i~~~~~~d~G~Y~C~~~n~~g~~~-----~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i 136 (197)
T 2j8h_A 62 HQLIIASVTDDDATVYQVRATNQGGSVS-----GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVI 136 (197)
T ss_dssp EEEEECSCCGGGCSEEEEEEEETTEEEE-----EEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEE
T ss_pred EEEEECcCCHHhCEEEEEEEEECCCcee-----EEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcE
Confidence 3899999999999999999999877542 22333332111 12233334456678899999999999999999999
Q ss_pred EEEECCEEeecCCcEEEEecCCeeEEEEee-cCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 485 SWYKDGFEIFSSRRQRIVTDNDISTLIIHQ-AALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~-l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
.|++++..+....++.+...+....|.|.+ +...|.|.|+|.|.|..|....++.|.|.
T Consensus 137 ~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 137 TWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 999999998877777777777778999999 99999999999999999998888887774
No 259
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.42 E-value=1e-12 Score=135.75 Aligned_cols=128 Identities=20% Similarity=0.299 Sum_probs=98.8
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccC-----------------CCCCCeeeecCceeEEccCC
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS-----------------PAAAPSFIRALHDTTALEDE 468 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~-----------------~~~~P~~~~~p~~~~v~~g~ 468 (1101)
.+|.|.++++.|+|.|+|.|.| |... ....+.+... ...+|.|...+ +..+.+|.
T Consensus 61 ~~L~I~~v~~~D~G~Y~C~a~N--g~a~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~ 132 (207)
T 3rbs_A 61 IEMFMEKLQDEDEGTYTFQLQD--GKAT-----NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGEC 132 (207)
T ss_dssp EEEEESCCCGGGCEEEEEEEEE--TTEE-----EEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTT
T ss_pred EEEEECCCChhhCEEEEEEEEC--CCeE-----EEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCC
Confidence 3699999999999999999999 3322 1122211000 01367776665 57889999
Q ss_pred eEEEEEEEecc-CCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 469 KVEFTVQVEGI-PTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 469 ~v~L~C~~~g~-p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
++.|.|.+.|. |.|.++|+++|..+....++ ....+..+|.|.++...|+|.|+|.|.|..|....++.|.+.
T Consensus 133 ~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 133 NVLLKCKVANIKKETHIVWYKDEREISVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp EEEEEEEEESCCTTCEEEEEETTEEECCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred cEEEEEEEeCCCCCCEEEEEECCEECCCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 99999999998 99999999999998765443 223444579999999999999999999999999988887754
No 260
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.42 E-value=7.6e-13 Score=138.54 Aligned_cols=176 Identities=17% Similarity=0.173 Sum_probs=115.5
Q ss_pred CceeEEccCCeEEEEEEEeccCCCe---EEEEECCEEeec----------------CCcEEEE-------ecCCeeEEEE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPTPK---VSWYKDGFEIFS----------------SRRQRIV-------TDNDISTLII 512 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~~~---v~W~~~g~~~~~----------------~~~~~~~-------~~~~~~~l~I 512 (1101)
|.++.+..|++++|.|.+.+.|.+. |+|++++..+.. ..+.... ...+..+|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 4457788999999999999887764 899997643210 0111111 1123357999
Q ss_pred eecCCCCCEEEEEEEEeCCCceEEE-EEEeeccCCccccCCCCCCCeEEeeCCEEEEEEE-EeecCCCeeEEEECCeecC
Q psy8139 513 HQAALMDEGEIKCTATNRAGHSITK-ARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVS-MAGMPPPTARWLHNGEPLT 590 (1101)
Q Consensus 513 ~~l~~~d~g~Y~C~a~n~~g~~~~s-~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~-~~g~p~~~v~W~~~g~~l~ 590 (1101)
.++...|+|.|+|.+.|..|..... ..+.+..+|.....+.. .....+....+.|. ..+.|.+.+.|++++..+.
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~ 164 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQE---VTIGPQSVAVARCVSTGGRPPARITWISSLGGEA 164 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECC---BCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccc---eeecceeeeeeeeeecCCCCCCEEEEEECCcccc
Confidence 9999999999999999987765543 44555555544332221 12334556666655 4567889999998876543
Q ss_pred CCCceEEEeecc---eEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEE
Q psy8139 591 SGGRYEITHTDR---YLNLRISDARRADRGEYQAHGVNSLGEDVASFLVT 637 (1101)
Q Consensus 591 ~~~~~~~~~~~~---~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~ 637 (1101)
..........+. .+.|.|.++...|.|.|+|.|.|..|.......++
T Consensus 165 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 165 KDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVT 214 (225)
T ss_dssp EEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred CCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEE
Confidence 221111111111 34699999999999999999999998776554444
No 261
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.42 E-value=2.7e-12 Score=141.24 Aligned_cols=134 Identities=14% Similarity=0.111 Sum_probs=87.5
Q ss_pred eEEEEEccCCCCCCeEEEEEEEe--CCCCceeEEEEEEec----CCCCCCccEEEEecCCeEEEEeecCCCCCCccccee
Q psy8139 603 YLNLRISDARRADRGEYQAHGVN--SLGEDVASFLVTVTD----RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNY 676 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N--~~G~~~~s~~l~v~~----~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y 676 (1101)
...+.|.+|.+++.|.+++.|.| ..|.+..+..+.+.. ++.+|.++.+... .+++.|+|++|..++ +|
T Consensus 158 ~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~-~~s~~l~W~~p~~~~-----~~ 231 (306)
T 3s98_A 158 YSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ-NQNYVLKWDYTYANM-----TF 231 (306)
T ss_dssp CTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEE-TTEEEEEEECSSSSC-----EE
T ss_pred cceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEe-cCEEEEEeCCCCCcE-----EE
Confidence 45688999999999999999999 556665554444442 2356777777544 467888888764211 23
Q ss_pred EEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeec-ccccCccEEEEcC-CCC
Q psy8139 677 IVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRAS-PHMVEDTELMVSG-LEP 754 (1101)
Q Consensus 677 ~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~-~~~~~~~~~~i~~-L~p 754 (1101)
.+++ +.+|.+.++..++..|..+. -.....+.+.+.+ |.+
T Consensus 232 ~v~~--------------------------------------~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~ 273 (306)
T 3s98_A 232 QVQW--------------------------------------LHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQ 273 (306)
T ss_dssp EEEE--------------------------------------EEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSC
T ss_pred EEEE--------------------------------------ehhhhhccccccccCceECCCceeCCCccccCchhhcc
Confidence 3332 23454555555667898541 1225667888887 456
Q ss_pred CceEEEEEEEEcCCccCCCCCCCCcE
Q psy8139 755 GWRYQFRITAENVVGFSEPGPLSEPL 780 (1101)
Q Consensus 755 ~t~Y~~~V~A~n~~G~g~~S~~s~~~ 780 (1101)
...|.|||+|.|..|.|.+|....+.
T Consensus 274 ~~~Y~~RV~A~n~~~~s~~s~~~~~~ 299 (306)
T 3s98_A 274 KGIYLLRVQASDGNNTSFWSEEIKFD 299 (306)
T ss_dssp SSEEEEEEEEECSSCBCCCCCCEEEE
T ss_pred cCCEEEEEEEccCCCccccccccccC
Confidence 66999999999999998887655444
No 262
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.42 E-value=1.9e-12 Score=139.01 Aligned_cols=169 Identities=17% Similarity=0.270 Sum_probs=117.8
Q ss_pred CceeEEccCCeEEEEEEEecc--CCCeEEEEECC--E---Eee---------cCCcEEEEecCCeeEEEEeecCCCCCEE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGI--PTPKVSWYKDG--F---EIF---------SSRRQRIVTDNDISTLIIHQAALMDEGE 522 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~--p~~~v~W~~~g--~---~~~---------~~~~~~~~~~~~~~~l~I~~l~~~d~g~ 522 (1101)
|..+.+.+|++++|.|.+.+. |.+.+.|++.. . .+. ...++.+...+...+|.|.++...|+|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 445789999999999999887 78899999842 1 111 1246666656667789999999999999
Q ss_pred EEEEEEeCCCceE---EEEEEeeccCCcccc-----------------CCCCCCCeEEeeCCEEEEEEEEeecC--CCee
Q psy8139 523 IKCTATNRAGHSI---TKARLRLEAPPTIRL-----------------PKQYEDGLLFEMGEIIKLKVSMAGMP--PPTA 580 (1101)
Q Consensus 523 Y~C~a~n~~g~~~---~s~~l~V~~~p~~~~-----------------~~~~~~~~~v~~g~~~~l~c~~~g~p--~~~v 580 (1101)
|.|.+.|..+... ..+.|.|..++.... .........+.+|++++|.|.+.+.+ .+.+
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 168 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAM 168 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEE
T ss_pred EEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEE
Confidence 9999999765322 345677776542110 00111234577899999999999877 7899
Q ss_pred EEEEC--Ceec------C-----------CCCceEEEee--cceEEEEEccCCCCCCeEEEEEEEeCC
Q psy8139 581 RWLHN--GEPL------T-----------SGGRYEITHT--DRYLNLRISDARRADRGEYQAHGVNSL 627 (1101)
Q Consensus 581 ~W~~~--g~~l------~-----------~~~~~~~~~~--~~~~sl~i~~l~~~~~y~y~c~A~N~~ 627 (1101)
.|+++ +..+ . ...++.+... ....+|.|.+++..|+|.|.|.|.|..
T Consensus 169 ~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 169 SWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 99985 3221 0 1124554433 346679999999999999999999964
No 263
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.42 E-value=3.4e-13 Score=150.53 Aligned_cols=208 Identities=12% Similarity=0.150 Sum_probs=124.1
Q ss_pred CCCeeeecCceeEEccC--CeEEEEEEEecc-C-CCeEEEEECCEEeecCCcE-EEEecCC----eeEEEEeecCCCCCE
Q psy8139 451 AAPSFIRALHDTTALED--EKVEFTVQVEGI-P-TPKVSWYKDGFEIFSSRRQ-RIVTDND----ISTLIIHQAALMDEG 521 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g--~~v~L~C~~~g~-p-~~~v~W~~~g~~~~~~~~~-~~~~~~~----~~~l~I~~l~~~d~g 521 (1101)
.+|.+...+.......| +++.|.|.+.|. | .+.|+|+++|..+...... .....++ .+.|.|......|+|
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g 85 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDR 85 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTC
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCC
Confidence 34554443333223334 699999999886 3 4689999999988644221 1111122 235777777777999
Q ss_pred EEEEEEEeCCCceEEEEEEee---ccCCcc-ccCCCCCCCeEEeeCCEEEEEEEEeec-CCC---eeEEEECC-eecCCC
Q psy8139 522 EIKCTATNRAGHSITKARLRL---EAPPTI-RLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP---TARWLHNG-EPLTSG 592 (1101)
Q Consensus 522 ~Y~C~a~n~~g~~~~s~~l~V---~~~p~~-~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~---~v~W~~~g-~~l~~~ 592 (1101)
.|+|.|.|..+.......+.+ ...|.+ ..+|. ...+..|+.+.|.|.+.|. |.+ .+.|++++ ..+...
T Consensus 86 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~---~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~ 162 (323)
T 2wqr_A 86 TYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPS---PFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHS 162 (323)
T ss_dssp CEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCC---HHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCC
T ss_pred cEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCC---HHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccc
Confidence 999999998765543332211 112222 22221 1235579999999999986 455 99999964 444322
Q ss_pred CceEEEe-ec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEec---CCCCCCccEEEE-----ecCCeEEE
Q psy8139 593 GRYEITH-TD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTD---RPLPPGKAKVVM-----TLGKSVTL 660 (1101)
Q Consensus 593 ~~~~~~~-~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~---~P~~P~~~~~~~-----~~~~sv~l 660 (1101)
....... .+ ..+.|.|.++...|.|.|+|.|.|..+.... .+.+.. ...+| .+.+.. ..+..++|
T Consensus 163 ~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~--~~~v~~~~~~~~~P-~v~~~~~~~~~~~g~~~~l 239 (323)
T 2wqr_A 163 TRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRAL--MRSTTKTSGPRAAP-EVYAFATPEWPGSRDKRTL 239 (323)
T ss_dssp CCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCE--EEEECCCCSCCBCC-EEEEEECCCCTTCTTEEEE
T ss_pred cCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCe--eeEEEccCCCCCCC-EEEEeCCChHHhcCCcEEE
Confidence 1111100 00 2457999999999999999999998754333 333322 12222 222211 12678899
Q ss_pred Eeec
Q psy8139 661 SWSE 664 (1101)
Q Consensus 661 sW~~ 664 (1101)
.|..
T Consensus 240 ~C~~ 243 (323)
T 2wqr_A 240 ACLI 243 (323)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9985
No 264
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.42 E-value=5.4e-13 Score=133.13 Aligned_cols=152 Identities=17% Similarity=0.151 Sum_probs=108.0
Q ss_pred eeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecC------------CcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 461 DTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSS------------RRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 461 ~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~------------~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.+.+..|++++|.|.+.+ |.+.|.|++++..+... .+..+ .....+|+|.++...|+|.|.|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL--DTVSGSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEE--CTTTCCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEE--eCCCCeEEECCCChhhCceEEEEEe
Confidence 467889999999999854 88899999988654311 12222 1223489999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEE
Q psy8139 529 NRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRI 608 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i 608 (1101)
|..| .....|.|..++..+. +... +....|.|.+.+.|.|.++|+++|..+..... ..+.+
T Consensus 81 n~~~--~~~~~L~V~~~~~~p~-------i~~~-~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~---------~~l~~ 141 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMVSKPM-------IYWE-CSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ---------KTMSY 141 (171)
T ss_dssp TCCS--CEEEEEEEECCCCCCE-------EEEE-TTTTEEEEECSSCSSCEEEEEETTEEEEEESS---------SEEEE
T ss_pred CCCC--cEEEEEEEECcCCCCE-------EEEe-cCCcEEEEEeCCCCCcEEEEEECCEECcCCcc---------eEEEE
Confidence 8877 5667788876542210 0111 11137999999999999999999987753221 22333
Q ss_pred ccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 609 SDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 609 ~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
.+ .++.|.|+|.|.|..|.......+
T Consensus 142 ~~--~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 142 QW--TNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred ec--cCCCceEEEEEEcccCcccceeEE
Confidence 33 678899999999999986665544
No 265
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.41 E-value=1.8e-12 Score=136.26 Aligned_cols=185 Identities=10% Similarity=0.107 Sum_probs=117.8
Q ss_pred cCceeEEccCCeEEEEEEEeccC--CCeEEEEECC--EE---e---e-----------cCCcEEEEec--CCeeEEEEee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--FE---I---F-----------SSRRQRIVTD--NDISTLIIHQ 514 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~~---~---~-----------~~~~~~~~~~--~~~~~l~I~~ 514 (1101)
.|..+.+..|++++|.|.+.+.+ .+.+.|++.+ .. + . ...++.+..+ .+..+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 35567899999999999999876 6789999853 11 1 0 1245555542 3567999999
Q ss_pred cCCCCCEEEEEEEEeCCCce-EEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEEECCe
Q psy8139 515 AALMDEGEIKCTATNRAGHS-ITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWLHNGE 587 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g~~-~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~~~g~ 587 (1101)
+..+|+|.|.|.+.|..+.. ...+.|.|.. +|.+...+. ...+..|+.++|.|.+.|. |.+ .+.|++++.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~---~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 162 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAP---VCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSL 162 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECC---CC------CEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecC---CccccCCCcEEEEEEeecEeCCCeEEEEecCCC
Confidence 99999999999999864321 1234677764 233321111 1134578999999999985 766 999999887
Q ss_pred ecCCCCceEEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCC
Q psy8139 588 PLTSGGRYEITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPG 646 (1101)
Q Consensus 588 ~l~~~~~~~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~ 646 (1101)
.+.......+...+ ..+.|.|......+ |.|+|.|.|..+.......+.+..+|.+|-
T Consensus 163 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~~ 223 (227)
T 1mju_H 163 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPC 223 (227)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC-----
T ss_pred cCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCCC
Confidence 65311000010101 14578888888777 999999999877766666666666665553
No 266
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.41 E-value=2.1e-13 Score=142.94 Aligned_cols=181 Identities=15% Similarity=0.140 Sum_probs=124.4
Q ss_pred CceeEEccCCeEEEEEEEec-cCCCe----EEEEECCEEee-------------cCCcEEEEe-----cCCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEG-IPTPK----VSWYKDGFEIF-------------SSRRQRIVT-----DNDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g-~p~~~----v~W~~~g~~~~-------------~~~~~~~~~-----~~~~~~l~I~~l 515 (1101)
|.++.+..|++++|.|.+.+ .+.+. +.|++++.... ...+..+.. ..+..+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 44566889999999999844 44444 99999853211 123444443 223458999999
Q ss_pred CCCCCEEEEEEEEeCC-CceEEEEEEeeccCCccccCCCCCCCeEEeeCCEE-EEEEEEe-ecCCCeeEEEECCeecCCC
Q psy8139 516 ALMDEGEIKCTATNRA-GHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEII-KLKVSMA-GMPPPTARWLHNGEPLTSG 592 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~-g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~-~l~c~~~-g~p~~~v~W~~~g~~l~~~ 592 (1101)
...|+|.|+|.+.+.. |.....+.|.|..+|.+...+... . ..|..+ .|.|.+. +.|.+.++|++++......
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~---~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~ 161 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKV---Q-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQT 161 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECC---C-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCC
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCc---c-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCcc
Confidence 9999999999999976 777777888888888775433211 1 457777 5999988 8899999999865433221
Q ss_pred CceEEEee---cceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCC
Q psy8139 593 GRYEITHT---DRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPP 645 (1101)
Q Consensus 593 ~~~~~~~~---~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P 645 (1101)
........ ...+.|.|.++...|.|.|+|.|.|..+..... +.+...|..|
T Consensus 162 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~--~~v~~~~~~~ 215 (221)
T 3eow_R 162 SQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQL--LTVSLTVYYP 215 (221)
T ss_dssp EEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEE--EEECCCCCC-
T ss_pred ceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeE--EEEEEEEEcc
Confidence 11000001 114678999999999999999999988765444 5555556555
No 267
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.41 E-value=2.3e-12 Score=138.88 Aligned_cols=174 Identities=14% Similarity=0.178 Sum_probs=123.7
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccC------CCeEEEEEC--CE---Eee---------cCCcEEEEecCCeeEE
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIP------TPKVSWYKD--GF---EIF---------SSRRQRIVTDNDISTL 510 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p------~~~v~W~~~--g~---~~~---------~~~~~~~~~~~~~~~l 510 (1101)
..+.+...|..+.+.+|++++|.|.+.+.| .+.+.|++. +. .+. ...++.+...++..+|
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L 83 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTL 83 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEE
Confidence 345566778889999999999999998887 678999984 22 111 1345666555566799
Q ss_pred EEeecCCCCCEEEEEEEEeCCCce-EEEEEEeeccCCc------------------cccCCCCCCCeEEeeCCEEEEEEE
Q psy8139 511 IIHQAALMDEGEIKCTATNRAGHS-ITKARLRLEAPPT------------------IRLPKQYEDGLLFEMGEIIKLKVS 571 (1101)
Q Consensus 511 ~I~~l~~~d~g~Y~C~a~n~~g~~-~~s~~l~V~~~p~------------------~~~~~~~~~~~~v~~g~~~~l~c~ 571 (1101)
+|.++...|+|.|.|.+.|..+.. ...+.|.|..+|. +... ......+..|++++|.|.
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~G~~v~L~C~ 161 (264)
T 2gjj_A 84 TIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQ--QSGPEVVKTGASVKISCK 161 (264)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEE--ECCCEEECTTCCEEEEEE
T ss_pred EECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEe--CCCCEEEcCCCcEEEEEE
Confidence 999999999999999999876532 2235778876541 1110 112236888999999999
Q ss_pred EeecCC--CeeEEEECC--ee---cC----C----------CCceEEEe--ecceEEEEEccCCCCCCeEEEEEEEeC
Q psy8139 572 MAGMPP--PTARWLHNG--EP---LT----S----------GGRYEITH--TDRYLNLRISDARRADRGEYQAHGVNS 626 (1101)
Q Consensus 572 ~~g~p~--~~v~W~~~g--~~---l~----~----------~~~~~~~~--~~~~~sl~i~~l~~~~~y~y~c~A~N~ 626 (1101)
+.+.+. +.+.|+++. .. +. . ..++.+.. .....+|.|.++...|+|.|.|.|.|.
T Consensus 162 ~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 162 ASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 998874 899999853 21 10 0 22344332 234678999999999999999999995
No 268
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.41 E-value=1.4e-12 Score=116.71 Aligned_cols=96 Identities=25% Similarity=0.386 Sum_probs=85.5
Q ss_pred CCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecC--CcEEEEecCCeeEEEEeecCCCCCEEEEEE
Q psy8139 449 PAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSS--RRQRIVTDNDISTLIIHQAALMDEGEIKCT 526 (1101)
Q Consensus 449 ~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~--~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~ 526 (1101)
|..||.|...|.++.+.+|+++.|.|.+.|.|.|.++|+++|..+... .++.+...++..+|.|.++...|+|.|+|.
T Consensus 2 P~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 2 PGIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp CCEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEE
Confidence 346788888899999999999999999999999999999999998754 367777777788999999999999999999
Q ss_pred EEeCCCceEEEEEEeecc
Q psy8139 527 ATNRAGHSITKARLRLEA 544 (1101)
Q Consensus 527 a~n~~g~~~~s~~l~V~~ 544 (1101)
|.|..|....++.|.|..
T Consensus 82 a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 82 LGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCEEEEEEEEEEEE
Confidence 999999988888888863
No 269
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.41 E-value=3.3e-12 Score=133.04 Aligned_cols=140 Identities=11% Similarity=0.045 Sum_probs=96.0
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCcee-EEEEEEe--cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEE
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVA-SFLVTVT--DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVE 679 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~-s~~l~v~--~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~ 679 (1101)
...+.+.+|.+...|.|+|.|.|..|.+.+ ...+... .+|.||.++.+......
T Consensus 67 ~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~~~~~~~~~~----------------------- 123 (215)
T 1cd9_B 67 NCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPDV----------------------- 123 (215)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEETTEEEECCCEEECGGGGBCCCCCEEEECCC---------------------------
T ss_pred EEEECCcccccceEEEEEEEEECCCCCccCccEEEchHHceEeCCCcEEEEEEeccc-----------------------
Confidence 356677789999999999999999997533 2222211 25777776654433000
Q ss_pred EEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEE-eCCCCCceeecccccCccEEEEcCCCCCceE
Q psy8139 680 YFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHR-RTGSPYWVRASPHMVEDTELMVSGLEPGWRY 758 (1101)
Q Consensus 680 ~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~-~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 758 (1101)
...+.+++.|+|++|.. +|..+.+|.|.|+ ..++..|..+.......+.++|.+|.|++.|
T Consensus 124 -----------------~~~~~~~~~l~W~~p~~-~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y 185 (215)
T 1cd9_B 124 -----------------VSHQPGCLWLSWKPWKP-SEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVY 185 (215)
T ss_dssp --------------------CCSCEEEEEECCGG-GTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCE
T ss_pred -----------------cCCCCCeEEEEEeCCCC-CCeEEEEEEEEEccCCCCCCcEEEecccCcceEEEEcCCCCCCEE
Confidence 00023344455554432 2333579999999 6777788765433345688999999999999
Q ss_pred EEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 759 QFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 759 ~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
.|+|+|.|..|.|.+|+++..+...
T Consensus 186 ~~~Vra~~~~g~G~wS~wS~~~~~~ 210 (215)
T 1cd9_B 186 TLQMRCIRSSLPGFWSPWSPGLQLR 210 (215)
T ss_dssp EEEEEEEESSSCCCCCCCCCCEEEC
T ss_pred EEEEEeeECCCCCCCcCCCCcccee
Confidence 9999999999999999999887765
No 270
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.41 E-value=8.2e-12 Score=128.65 Aligned_cols=125 Identities=16% Similarity=0.192 Sum_probs=96.1
Q ss_pred eecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEE
Q psy8139 599 HTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIV 678 (1101)
Q Consensus 599 ~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v 678 (1101)
.......+.|.+|.+++.|.|+|.|.|..|.+..........+| +|.++.+...+.+++.|+|++|.
T Consensus 72 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~------------ 138 (203)
T 2gee_A 72 VDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP------------ 138 (203)
T ss_dssp EETTCCEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCC-CCEEEEEEEEETTEEEEEEECCS------------
T ss_pred cCCCccEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCc-CCCceEEEEcCCCEEEEEEcCCC------------
Confidence 34456789999999999999999999998877655444444444 88888888888888888888653
Q ss_pred EEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCC-CceeecccccCccEEEEcCCCCCce
Q psy8139 679 EYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSP-YWVRASPHMVEDTELMVSGLEPGWR 757 (1101)
Q Consensus 679 ~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~ 757 (1101)
++++.+|.|.|+..++. .|.... .....++++|.+|.|++.
T Consensus 139 -------------------------------------~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~ 180 (203)
T 2gee_A 139 -------------------------------------SIDLTNFLVRYSPVKNEEDVAELS-ISPSDNAVVLTNLLPGTE 180 (203)
T ss_dssp -------------------------------------SCCCSEEEEEEEETTCGGGCEEEE-ECTTCCEEEECSCCTTCE
T ss_pred -------------------------------------CCCccEEEEEEEECCCCCccEEEE-cCCCcCEEEECCCCCCCE
Confidence 12477888888875443 333322 236789999999999999
Q ss_pred EEEEEEEEcCCccCCCC
Q psy8139 758 YQFRITAENVVGFSEPG 774 (1101)
Q Consensus 758 Y~~~V~A~n~~G~g~~S 774 (1101)
|.|+|.|.|..|.|+|+
T Consensus 181 Y~~~V~A~~~~g~s~p~ 197 (203)
T 2gee_A 181 YVVSVSSVYEQHESTPL 197 (203)
T ss_dssp EEEEEEEEETTEECCCE
T ss_pred EEEEEEEecCCCcCCCe
Confidence 99999999999997764
No 271
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.41 E-value=1.2e-12 Score=137.24 Aligned_cols=172 Identities=12% Similarity=0.124 Sum_probs=116.7
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--EE---ee----------------cCCcEEEEec--CCeeEEEEe
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--FE---IF----------------SSRRQRIVTD--NDISTLIIH 513 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~~---~~----------------~~~~~~~~~~--~~~~~l~I~ 513 (1101)
|..+.+..|++++|.|.+.+.| .+.+.|++.. .. +. ...++.+..+ .+..+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 4456789999999999999865 6789999842 11 10 1245555543 345689999
Q ss_pred ecCCCCCEEEEEEEEeCCC-----ceEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEE
Q psy8139 514 QAALMDEGEIKCTATNRAG-----HSITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARW 582 (1101)
Q Consensus 514 ~l~~~d~g~Y~C~a~n~~g-----~~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W 582 (1101)
++...|+|.|.|.+.|..| .....+.|.|.. +|.+...+.. ..+..|+.+.|.|.+.|. |.| .+.|
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~---~~~~~g~~v~L~C~~~g~~P~p~~v~W 163 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPG---SAAQTNSMVTLGCLVKGYFPEPVTVTW 163 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCC---SCCCCSSEEEEEEEEEEEBSSCCEEEE
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcccc---ccccCCCcEEEEEEEccEECCCCEEEE
Confidence 9999999999999998765 222335666654 2333221111 123469999999999985 877 9999
Q ss_pred EECCeecCCCCceEEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEE
Q psy8139 583 LHNGEPLTSGGRYEITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASF 634 (1101)
Q Consensus 583 ~~~g~~l~~~~~~~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~ 634 (1101)
+++|..+...........+ ..+.|.|..+...| |.|+|.|.|..|......
T Consensus 164 ~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 164 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp GGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred ecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 9998765421100111111 13468899988888 999999999998755443
No 272
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.40 E-value=2.4e-12 Score=118.06 Aligned_cols=79 Identities=39% Similarity=0.664 Sum_probs=61.8
Q ss_pred EEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 705 TIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 705 ~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
+|+|.+|..+++.+|.+|.|+|+..+...|..+.......++++|.+|.|++.|.|+|.|.|..|.|++|..+..+++.
T Consensus 26 ~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~ 104 (111)
T 1x5y_A 26 TLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIR 104 (111)
T ss_dssp EEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEEETTEECCCCCCSSCBCCC
T ss_pred EEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCccCCCCEEec
Confidence 3333333344445688999999888877898876544668899999999999999999999999999999887666553
No 273
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.40 E-value=1.6e-12 Score=134.94 Aligned_cols=169 Identities=13% Similarity=0.155 Sum_probs=113.6
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEEC--CEEee----------------cCCcEEEEec--CCeeEEEEeecC
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKD--GFEIF----------------SSRRQRIVTD--NDISTLIIHQAA 516 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~--g~~~~----------------~~~~~~~~~~--~~~~~l~I~~l~ 516 (1101)
|..+.+..|++++|.|.+.+.| .+.+.|+++ +.... ...++.+... ++..+|.|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 5567889999999999999875 478999984 22110 1345555542 345689999999
Q ss_pred CCCCEEEEEEEEeCCCceEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEEECCeecC
Q psy8139 517 LMDEGEIKCTATNRAGHSITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWLHNGEPLT 590 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g~~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~~~g~~l~ 590 (1101)
..|+|.|.|.+.|.. .......|.|.. +|.+...+.. ..+..|+.+.|.|.+.|. |.| .+.|++++..+.
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~---~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~ 162 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPG---SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 162 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCT---TSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCC---cccccCCcEEEEEEEeeEecCCcEEEEeeCCcccc
Confidence 999999999999863 112234566653 3333211111 124579999999999987 877 999999887643
Q ss_pred CCCceEEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCcee
Q psy8139 591 SGGRYEITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 591 ~~~~~~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~ 632 (1101)
......+...+ ..+.|.|......+ |.|+|.|.|..|....
T Consensus 163 ~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 163 VHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp EEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred eEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 11000011111 14568888888766 9999999999887543
No 274
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.40 E-value=3.7e-12 Score=132.31 Aligned_cols=133 Identities=24% Similarity=0.291 Sum_probs=105.6
Q ss_pred ceEEEcCccC-CccEEEEEEEEecCCCCCCCCCCcceEEEeccCC---CCCCeeeecCceeEEccCCeEEEEEEEeccCC
Q psy8139 406 TELMVSGLEP-GWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSP---AAAPSFIRALHDTTALEDEKVEFTVQVEGIPT 481 (1101)
Q Consensus 406 ~~l~i~~L~p-~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~---~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~ 481 (1101)
..|.|.++.. .|.|.|+|.|.|..|... +..+.+.+...+ ..+|.+...|....+..|+.++|.|.+.|.|.
T Consensus 64 ~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~----~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 139 (212)
T 2yd1_A 64 SILRIEPVRAGRDDAPYECVAENGVGDAV----SADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPT 139 (212)
T ss_dssp EEEEESSCCTTTTCSEEEEEEECSSSCEE----EEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSC
T ss_pred EEEEEEecCCCCcCceEEEEEEeCCCCeE----EeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCC
Confidence 5799999999 999999999999887521 233455554332 23478888888888999999999999999999
Q ss_pred CeEEEEECCEEeecC-CcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEE-EEEeeccCC
Q psy8139 482 PKVSWYKDGFEIFSS-RRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITK-ARLRLEAPP 546 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~-~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s-~~l~V~~~p 546 (1101)
+.+.|++++..+... ..+. ...+ .|.|.++...|+|.|+|.|.|..|...+. +.|.|...+
T Consensus 140 p~i~W~~~~~~~~~~~~~~~-~~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 140 PNIYWIKNQTKVDMSNPRYS-LKDG---FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp CEEEEEETTEECCTTSTTEE-EETT---EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CeEEEEECCeEcccCCCeEE-ccCC---eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 999999999988754 3332 2232 89999999999999999999999988765 788887654
No 275
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.39 E-value=3.1e-12 Score=139.22 Aligned_cols=182 Identities=14% Similarity=0.185 Sum_probs=122.4
Q ss_pred CceeEEccCCeEEEEEEEecc--CCCeEEEEECC--EEe------e-----------cCCcEEEE--ecCCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEGI--PTPKVSWYKDG--FEI------F-----------SSRRQRIV--TDNDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~--p~~~v~W~~~g--~~~------~-----------~~~~~~~~--~~~~~~~l~I~~l 515 (1101)
|..+.+.+|++++|.|.+.+. +.+.+.|++.. ... . ...++.+. ...+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 667889999999999999875 56789998732 100 0 11345554 2345568999999
Q ss_pred CCCCCEEEEEEEEeCC---------CceEEEEEEeecc---------------CCccccCCCCCCCeEEeeCCEEEEEEE
Q psy8139 516 ALMDEGEIKCTATNRA---------GHSITKARLRLEA---------------PPTIRLPKQYEDGLLFEMGEIIKLKVS 571 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~---------g~~~~s~~l~V~~---------------~p~~~~~~~~~~~~~v~~g~~~~l~c~ 571 (1101)
..+|+|.|.|.+.|.. ........|.|.. ++.+..++ ...+.+|++++|.|.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p----~~~v~~G~~v~L~C~ 162 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPP----SVSKGLRQTATLTCT 162 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCS----EEEECTTCCEEEEEE
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCC----cEEEecCCCEEEEEE
Confidence 9999999999999861 1122234666665 33333222 157889999999999
Q ss_pred Eee-cC-CCeeEEEEC--CeecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCC---cee
Q psy8139 572 MAG-MP-PPTARWLHN--GEPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGE---DVA 632 (1101)
Q Consensus 572 ~~g-~p-~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~---~~~ 632 (1101)
+.+ .+ .+.+.|++. +.... ...++.....+...+|.|.++++.|+|.|.|.+.|..+. -..
T Consensus 163 ~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~ 242 (280)
T 3fku_X 163 GNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGG 242 (280)
T ss_dssp CCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBC
T ss_pred ecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECC
Confidence 998 44 489999872 22211 124566665666778999999999999999999997632 122
Q ss_pred EEEEEEecCCCC
Q psy8139 633 SFLVTVTDRPLP 644 (1101)
Q Consensus 633 s~~l~v~~~P~~ 644 (1101)
...|.|...|..
T Consensus 243 ~t~l~V~~~~~~ 254 (280)
T 3fku_X 243 GTKLTVLGQPKA 254 (280)
T ss_dssp CCEEEEC-----
T ss_pred CEEEEECCCCCC
Confidence 345666655443
No 276
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=2.9e-12 Score=117.37 Aligned_cols=80 Identities=31% Similarity=0.605 Sum_probs=63.1
Q ss_pred EEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 704 FTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 704 i~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
++|+|.+|..+++.+|.+|.|+|+..+...|..+.......+.++|.+|.|++.|.|+|+|.|..|.|++|..+..+++.
T Consensus 24 v~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~ 103 (110)
T 2yuw_A 24 VTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVK 103 (110)
T ss_dssp EEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEEEETTEECCCEECSSCEECC
T ss_pred EEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEEEcCCcCCCCcCCCCCEEec
Confidence 33333334444556788999999988877888876544678899999999999999999999999999999888777654
No 277
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.39 E-value=1.4e-13 Score=125.81 Aligned_cols=86 Identities=34% Similarity=0.649 Sum_probs=75.4
Q ss_pred CCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCcc-CCCCCC
Q psy8139 698 SLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGF-SEPGPL 776 (1101)
Q Consensus 698 ~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~-g~~S~~ 776 (1101)
.++.++++|+|.+|..++|.+|++|.|+|+..++..|..+.......++++|.+|.|++.|.|+|.|.|..|. |++|..
T Consensus 21 ~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~ 100 (112)
T 1bpv_A 21 NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEP 100 (112)
T ss_dssp EEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEECTTSCEEEEEEE
T ss_pred EeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEEECCCCCCCCCCC
Confidence 5789999999999988999999999999999888889887644466789999999999999999999999996 999877
Q ss_pred CCcEEec
Q psy8139 777 SEPLTVT 783 (1101)
Q Consensus 777 s~~~t~~ 783 (1101)
+..+++.
T Consensus 101 ~~~~t~~ 107 (112)
T 1bpv_A 101 SDAITCR 107 (112)
T ss_dssp EEEECSC
T ss_pred CCCEEeC
Confidence 7666543
No 278
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.38 E-value=1.9e-12 Score=132.06 Aligned_cols=130 Identities=23% Similarity=0.311 Sum_probs=104.3
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVS 485 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~ 485 (1101)
..|.|.+++..|.|.|+|.+.|..|.... ....+.+. .+|.+...+....+..|+.+.|.|.+.|.|.+.+.
T Consensus 62 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~----~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~ 133 (192)
T 2iep_A 62 QLLTILSVEDSDDGIYCCTANNGVGGAVE----SCGALQVK----MKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVS 133 (192)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSSCCEE----EEEEEEEE----EEEEEEECCCCEEEETTSCEEECCEEEEESCCEEE
T ss_pred cEEEEcCCCcccCeEEEEEEEcCCCceeE----eEEEEEEE----eCCccccCCcceEEeCCCcEEEEEEEeccCCceEE
Confidence 46999999999999999999998776322 12333332 45677777778889999999999999999999999
Q ss_pred EEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EEEEeeccCC
Q psy8139 486 WYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KARLRLEAPP 546 (1101)
Q Consensus 486 W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~~l~V~~~p 546 (1101)
|++++..+....++.....+ .|.|.++...|+|.|+|.|.|..|...+ ...|.|..+|
T Consensus 134 W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 134 WIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999988876666554333 7999999999999999999999998744 5778887664
No 279
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.38 E-value=1.9e-12 Score=139.26 Aligned_cols=171 Identities=13% Similarity=0.161 Sum_probs=107.4
Q ss_pred CeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEEC--C-E--Eeec-C-------------CcEEEE--ecCCeeEEE
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--G-F--EIFS-S-------------RRQRIV--TDNDISTLI 511 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g-~--~~~~-~-------------~~~~~~--~~~~~~~l~ 511 (1101)
|.+...|..+.+.+|++++|.|.+.+.|.+.+.|++. + . .+.. . .+.... ...+..+|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 4455667788999999999999999999999999982 1 1 1110 0 011111 122345799
Q ss_pred EeecCCCCCEEEEEEEEeCCCc---eEEEEEEeeccCC-----------------ccccCCCCCCCeEEeeCCEEEEEEE
Q psy8139 512 IHQAALMDEGEIKCTATNRAGH---SITKARLRLEAPP-----------------TIRLPKQYEDGLLFEMGEIIKLKVS 571 (1101)
Q Consensus 512 I~~l~~~d~g~Y~C~a~n~~g~---~~~s~~l~V~~~p-----------------~~~~~~~~~~~~~v~~g~~~~l~c~ 571 (1101)
|.++..+|+|.|.|.+.|..+. ......|.|..++ .+.. .+..+.+..|++++|.|.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~---~p~~~~v~~G~~v~L~C~ 159 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQ---AQSSVSMPVRKAVTLNCL 159 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEEC---CCCCEEEETTCCEEECCE
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEE---eCCEEEEcCCCCEEEEEE
Confidence 9999999999999999998762 2234567776532 2222 223567889999999999
Q ss_pred Eeec-CCCeeEEEECCe--ecC------------CCCceEEE--eecceEEEEEccCCCCCCeEEEEEEEeC
Q psy8139 572 MAGM-PPPTARWLHNGE--PLT------------SGGRYEIT--HTDRYLNLRISDARRADRGEYQAHGVNS 626 (1101)
Q Consensus 572 ~~g~-p~~~v~W~~~g~--~l~------------~~~~~~~~--~~~~~~sl~i~~l~~~~~y~y~c~A~N~ 626 (1101)
..+. +.+.+.|++.+. .+. ...++.+. ......+|.|.+++..|+|.|.|.+.+.
T Consensus 160 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 160 YETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp EECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred CCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 8875 789999998431 110 01234333 2234567999999999999999999864
No 280
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.38 E-value=9.6e-12 Score=127.23 Aligned_cols=122 Identities=18% Similarity=0.285 Sum_probs=100.3
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC-eE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP-KV 484 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~-~v 484 (1101)
..|.|.+++..|.|.|+|.|.|..|... +..+.+.+. .+|.+...|.+..+..|+.+.|.|.+.|.|.| .+
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v 139 (195)
T 2c5d_C 68 SQLRITSLQLSDTGQYQCLVFLGHQTFV----SQPGYVGLE----GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDL 139 (195)
T ss_dssp EEEEESSCCSTTCEEEEEEEEETTEEEE----CCCEEEEEC----CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEE
T ss_pred cEEEEEeccccCCcEEEEEEEeCCCcee----cccEEEEEe----cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEE
Confidence 5799999999999999999999776532 233555553 56888888888999999999999999999999 99
Q ss_pred EEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE-EEEEEee
Q psy8139 485 SWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI-TKARLRL 542 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~-~s~~l~V 542 (1101)
.|++++..+...... .....|.|.++. |+|.|+|.|.|..|... ..+.|.|
T Consensus 140 ~W~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 140 LWLQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 999999887654432 334589999987 78999999999999885 5777777
No 281
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.37 E-value=5.2e-12 Score=128.31 Aligned_cols=130 Identities=21% Similarity=0.316 Sum_probs=101.6
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCc--eeEEccCCeEEEEEEEeccCCC
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALH--DTTALEDEKVEFTVQVEGIPTP 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~--~~~v~~g~~v~L~C~~~g~p~~ 482 (1101)
+.+|.|.++++.|.|.|+|.+.|..+..... ..+.+.+. .+|.+...+. ...+..|+.+.|.|.+.|.|.+
T Consensus 56 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~---~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~ 128 (189)
T 2v5t_A 56 NNNLQILNINKSDEGIYRCEGRVEARGEIDF---RDIIVIVN----VPPAISMPQKSFNATAERGEEMTFSCRASGSPEP 128 (189)
T ss_dssp TSCEEETTCCGGGCEEEEEEEEETTTTEEEE---EEEEEEEE----EEEEEECSCCEEEEETTSCCCEEEECEEEEESCC
T ss_pred CCCEEEeeCCHhHCcEEEEEEEEcCCCceEE---EEEEEEec----CCCCcccccccccccccCCCcEEEEEEEccCCCC
Confidence 4579999999999999999999987543211 22333332 3444443333 4567889999999999999999
Q ss_pred eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
.+.|+++|..+.....+.+...+ ..|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 129 ~v~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 129 AISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEEEEETTEECCCSSSEEEETTT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEEECCEECcCCCcEEEecCC--CEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 99999999998877766654433 489999999999999999999999998888877764
No 282
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.36 E-value=8.3e-12 Score=127.75 Aligned_cols=130 Identities=18% Similarity=0.211 Sum_probs=104.6
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeee---ecCceeEEccCCeEEEEEEEeccCCC
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFI---RALHDTTALEDEKVEFTVQVEGIPTP 482 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~---~~p~~~~v~~g~~v~L~C~~~g~p~~ 482 (1101)
..|.|.++...|.|.|+|.|.|..|.... .+.+.+.. +|.+. ..+....+..|+.+.|.|.+.|.|.+
T Consensus 63 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~-----~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p 133 (197)
T 3lcy_A 63 HTLTVMTEEQEDEGVYTCIATNEVGEVET-----SSKLLLQA----TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVP 133 (197)
T ss_dssp EEEEEECCSGGGCEEEEEEEECSSCEEEE-----EEEEEEEE----EEEECTTSCCCSEEEEETTSCEEEEEEEEEESCC
T ss_pred EEEEEecCCccCCEEEEEEEECCCCceeE-----EEEEEEEc----CCCCCCCccCCcceeecCCCeEEEEEEEeeeeCC
Confidence 37999999999999999999998775432 23333321 22221 12355678899999999999999999
Q ss_pred eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCC-CCCEEEEEEEEeCCCceEEEEEEeecc
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAAL-MDEGEIKCTATNRAGHSITKARLRLEA 544 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~-~d~g~Y~C~a~n~~g~~~~s~~l~V~~ 544 (1101)
.+.|++++..+.....+.+...+....|.|.++.. .|.|.|+|.|.|..|....++.|.|..
T Consensus 134 ~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 134 AMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred eeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 99999999999888888877777777999999995 899999999999999988888887753
No 283
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.36 E-value=7.3e-12 Score=130.95 Aligned_cols=171 Identities=11% Similarity=0.104 Sum_probs=114.5
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--EE---ee---c-------------CCcEEEEec--CCeeEEEEe
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--FE---IF---S-------------SRRQRIVTD--NDISTLIIH 513 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~~---~~---~-------------~~~~~~~~~--~~~~~l~I~ 513 (1101)
|..+.+..|++++|.|.+.+.+ .+.+.|++++ .. +. . ..++.+... .+..+|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 5567889999999999999876 6789999843 11 10 0 245555432 345689999
Q ss_pred ecCCCCCEEEEEEEEeCCCce-E--EEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEEE
Q psy8139 514 QAALMDEGEIKCTATNRAGHS-I--TKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWLH 584 (1101)
Q Consensus 514 ~l~~~d~g~Y~C~a~n~~g~~-~--~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~~ 584 (1101)
++...|+|.|.|.+.|..+.. . ..+.|.|.. +|.+...+.. ..+..|+.+.|.|.+.|. |.| .+.|++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~---~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 163 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPG---CSDTSGSSVTLGCLVKGYFPEPVTVKWNY 163 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC---SCCSCSSSEEEEEEEEEEBSSCCEEEEGG
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccc---cccCCCCcEEEEEEEEEEeCCCeEEEEec
Confidence 999999999999999976432 1 235666663 3333221111 124568999999999987 888 999999
Q ss_pred CCeecC--CCCceEEE-eecceEEEEEccCCCCCCeEEEEEEEeCCCCceeE
Q psy8139 585 NGEPLT--SGGRYEIT-HTDRYLNLRISDARRADRGEYQAHGVNSLGEDVAS 633 (1101)
Q Consensus 585 ~g~~l~--~~~~~~~~-~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s 633 (1101)
++.... ........ .-...+.|.|......+ |.|+|.|.|..|....+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 214 (220)
T 1pz5_B 164 GALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLI 214 (220)
T ss_dssp GTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred CCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeee
Confidence 876421 00000000 00014678888888766 99999999999864443
No 284
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.36 E-value=6.4e-13 Score=140.56 Aligned_cols=169 Identities=13% Similarity=0.149 Sum_probs=115.9
Q ss_pred CceeEEccCCeEEEEEEEeccCC-C-eEEEEECC--EEe---e---------cCCcEEEEecCCeeEEEEeecCCCCCEE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPT-P-KVSWYKDG--FEI---F---------SSRRQRIVTDNDISTLIIHQAALMDEGE 522 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~-~-~v~W~~~g--~~~---~---------~~~~~~~~~~~~~~~l~I~~l~~~d~g~ 522 (1101)
|..+.+..|++++|.|.+.+.+. + .+.|++++ ... . ...++.....++..+|.|.++...|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 66778899999999999987543 4 69999853 211 0 1245655555666799999999999999
Q ss_pred EEEEEEeCCCc---eEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeecCC--CeeEEEECCeecCCCC
Q psy8139 523 IKCTATNRAGH---SITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPP--PTARWLHNGEPLTSGG 593 (1101)
Q Consensus 523 Y~C~a~n~~g~---~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~--~~v~W~~~g~~l~~~~ 593 (1101)
|.|.+.|..+. ....+.|.|.. +|.+...+. ...+..|+.+.|.|.+.|.++ +.++|+++|..+..+.
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~---~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 182 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPP---SSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGV 182 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECC---CHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSE
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCC---ChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCc
Confidence 99999998873 12234566643 333321111 011224778999999998643 4899999999886542
Q ss_pred ceE-EEe-ec----ceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 594 RYE-ITH-TD----RYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 594 ~~~-~~~-~~----~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
... ... .+ ..+.|.|......|.|.|+|.|.|..+..
T Consensus 183 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 183 ETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 225 (234)
T ss_dssp EECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCC
T ss_pred cccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCce
Confidence 110 000 11 13568889999999999999999987763
No 285
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.36 E-value=1.3e-11 Score=131.04 Aligned_cols=180 Identities=13% Similarity=0.132 Sum_probs=118.9
Q ss_pred eeecCceeEEccCCeEEEEEEEecc--CCCeEEEEECC--E---Eee--------------cCCcEEEEecC--CeeEEE
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGI--PTPKVSWYKDG--F---EIF--------------SSRRQRIVTDN--DISTLI 511 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~--p~~~v~W~~~g--~---~~~--------------~~~~~~~~~~~--~~~~l~ 511 (1101)
+...|..+.+..|++++|.|.+.+. +.+.+.|++.. . .+. ...++.+.... +..+|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 4455778889999999999999885 66789999842 1 111 23455554332 466899
Q ss_pred EeecCCCCCEEEEEEEEeCCC-c------eEEEEEEeeccC-------CccccCCCCCCCeEEeeCCEEEEEEEEeec-C
Q psy8139 512 IHQAALMDEGEIKCTATNRAG-H------SITKARLRLEAP-------PTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-P 576 (1101)
Q Consensus 512 I~~l~~~d~g~Y~C~a~n~~g-~------~~~s~~l~V~~~-------p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p 576 (1101)
|.++..+|+|.|.|.+.+..+ . ......|.|... |.+.... +....+..|+.+.|.|.+.|. |
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~--p~~~~~~~g~~v~L~C~~~g~~P 161 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFL--PSIAETKLQKAGTYLCLLEKFFP 161 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCC--CCGGGGGSSSCEEEEEEEEEESS
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEEC--CChhhcccCCCceEEEEEeeEEC
Confidence 999999999999999998631 1 112356777653 2222111 111123458899999999986 5
Q ss_pred C-CeeEEEECCe-ecCCCCce-EEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 577 P-PTARWLHNGE-PLTSGGRY-EITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 577 ~-~~v~W~~~g~-~l~~~~~~-~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
. +.+.|++++. .+...... .....+ ....|.|..... + |.|+|.|.|..+.......+.+
T Consensus 162 ~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 162 DVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 4 7999999987 55322100 011111 134688877664 4 9999999999988766666655
No 286
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.36 E-value=1.4e-12 Score=121.88 Aligned_cols=108 Identities=27% Similarity=0.490 Sum_probs=81.2
Q ss_pred CCCceeEEEEEEecCCCCCCcc--EEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceE
Q psy8139 627 LGEDVASFLVTVTDRPLPPGKA--KVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVF 704 (1101)
Q Consensus 627 ~G~~~~s~~l~v~~~P~~P~~~--~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si 704 (1101)
.|..+.+..+.+.++|.+|.++ .+...+.+++.|+|.+|
T Consensus 3 ~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~~~sv~l~W~~p--------------------------------------- 43 (121)
T 1wf5_A 3 SGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKP--------------------------------------- 43 (121)
T ss_dssp CCCCCCCCCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCC---------------------------------------
T ss_pred CCcccceEEEEEeeCCccCCCcceeeEeccCCEEEEEEcCC---------------------------------------
Confidence 4666667777777888888888 55555566666666644
Q ss_pred EEEeeCCCCCCCCCcceEEEEEEeCCCCCceee-cccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEe
Q psy8139 705 TIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRA-SPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTV 782 (1101)
Q Consensus 705 ~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~ 782 (1101)
.+++++|.+|.|+|+..+ ..|..+ .......++++|.+|.|++.|.|+|.|.|..|.|++|..+..+++
T Consensus 44 --------~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t 113 (121)
T 1wf5_A 44 --------FDGNSPLIRYILEMSENN-APWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSL 113 (121)
T ss_dssp --------CCCSSCEEEEEEEEECTT-CCCEEEESSCCTTCCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEEC
T ss_pred --------CCCCCcceEEEEEEEcCC-CCceEeEcccCCCccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEc
Confidence 334456888888888765 577765 333467789999999999999999999999999999887754443
No 287
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.36 E-value=1.3e-11 Score=133.52 Aligned_cols=176 Identities=16% Similarity=0.240 Sum_probs=120.5
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccC-----CCeEEEEECC--E---Eee---------cCCcEEEEecCCeeEEE
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIP-----TPKVSWYKDG--F---EIF---------SSRRQRIVTDNDISTLI 511 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p-----~~~v~W~~~g--~---~~~---------~~~~~~~~~~~~~~~l~ 511 (1101)
..+.+...|..+.+.+|++++|.|.+.+.+ .+.+.|++.. . .+. ...++.+...++..+|+
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 445566778888999999999999998877 4789999842 1 111 13456665556667999
Q ss_pred EeecCCCCCEEEEEEEEeCCCceE-EEEEEeeccCCcccc---CC-----------------CCCCCeEEeeCCEEEEEE
Q psy8139 512 IHQAALMDEGEIKCTATNRAGHSI-TKARLRLEAPPTIRL---PK-----------------QYEDGLLFEMGEIIKLKV 570 (1101)
Q Consensus 512 I~~l~~~d~g~Y~C~a~n~~g~~~-~s~~l~V~~~p~~~~---~~-----------------~~~~~~~v~~g~~~~l~c 570 (1101)
|.++...|+|.|.|.+.|..+... ....|.|..++.... +| ..+....+..|++++|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 999999999999999998755322 235677765432100 00 011245788899999999
Q ss_pred EEeecCC--CeeEEEEC--Ceec-------------------CCCCceEEEee--cceEEEEEccCCCCCCeEEEEEEEe
Q psy8139 571 SMAGMPP--PTARWLHN--GEPL-------------------TSGGRYEITHT--DRYLNLRISDARRADRGEYQAHGVN 625 (1101)
Q Consensus 571 ~~~g~p~--~~v~W~~~--g~~l-------------------~~~~~~~~~~~--~~~~sl~i~~l~~~~~y~y~c~A~N 625 (1101)
.+.+.+. +.+.|++. +..+ ....++.+... ....+|.|.+++..|+|.|.|.|.|
T Consensus 174 ~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGAS 253 (268)
T ss_dssp EEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 9998763 89999874 2211 11234554432 2357899999999999999999988
Q ss_pred C
Q psy8139 626 S 626 (1101)
Q Consensus 626 ~ 626 (1101)
.
T Consensus 254 ~ 254 (268)
T 1x9q_A 254 Y 254 (268)
T ss_dssp T
T ss_pred C
Confidence 4
No 288
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.36 E-value=3e-11 Score=126.56 Aligned_cols=171 Identities=9% Similarity=0.087 Sum_probs=114.0
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E---Eee--------------cCCcEEEEec--CCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F---EIF--------------SSRRQRIVTD--NDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~---~~~--------------~~~~~~~~~~--~~~~~l~I~~l 515 (1101)
|..+.+..|++++|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3467889999999999998765 4789999842 1 110 1245665543 34568999999
Q ss_pred CCCCCEEEEEEEEeCCC---c---eEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEE
Q psy8139 516 ALMDEGEIKCTATNRAG---H---SITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWL 583 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~g---~---~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~ 583 (1101)
...|+|.|.|.+.+..| . ....+.|.|.. +|.+...+.. ..+..|..+.|.|.+.+. |.+ .++|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~---~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 163 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSC---ENSNPSSTVAVGCLAQDFLPDSITFSWK 163 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECT---TCCCSSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCC---cccCCCCcEEEEEEEEEEeCCCeEEEeE
Confidence 99999999999998754 1 11234677763 2333211100 123578999999999987 766 99999
Q ss_pred E-CCeecCCCCceE-EEeec---ceEEEEEccCCC--CCCeEEEEEEEeCCCCcee
Q psy8139 584 H-NGEPLTSGGRYE-ITHTD---RYLNLRISDARR--ADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 584 ~-~g~~l~~~~~~~-~~~~~---~~~sl~i~~l~~--~~~y~y~c~A~N~~G~~~~ 632 (1101)
+ +|..+.....+. ....+ ..+.|.|..... .|.|.|+|.|.|..|....
T Consensus 164 ~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~ 219 (223)
T 1dee_B 164 YKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEK 219 (223)
T ss_dssp ETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEE
T ss_pred ccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcc
Confidence 9 888775300000 00001 134577777665 6789999999999887544
No 289
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.35 E-value=2.8e-12 Score=132.70 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=101.6
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
.+.+|.|.+++..|+|.|+|.+.|..+... +..+.+.+.. +...|.+...+.. +..|+++.|.|.+.+.| +.
T Consensus 69 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~----~~~~~l~V~~-~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~ 140 (208)
T 3r4d_A 69 SNGSLLFQMITMKDMGVYTLDMTDENYRRT----QATVRFHVHQ-PVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-AN 140 (208)
T ss_dssp TTSCEEECSCCGGGCEEEEEEEECSSCEEE----EEEEEEEEEC-CCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CE
T ss_pred cCCeEEEccccccCCeEEEEEEEcccCcee----EEEEEEEecc-CCCCCEEecCCce--EeeCCCEEEEEECCCCC-Cc
Confidence 346899999999999999999999754221 2334444442 2344666555444 88999999999999976 79
Q ss_pred EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EEEEeeccCCcc
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KARLRLEAPPTI 548 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~~l~V~~~p~~ 548 (1101)
+.|++++..+....++.+...+ ..|.|.++...|+|.|+|.|.|..|...+ ...|.|..+|..
T Consensus 141 i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 141 IQWLFNSQSLQLTERMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp EEEEETTEECCCCSSEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred eEEEECCEeCCCCCCeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 9999999998877777665444 38999999999999999999999998765 467777776643
No 290
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.35 E-value=2.2e-12 Score=143.06 Aligned_cols=256 Identities=10% Similarity=-0.001 Sum_probs=143.1
Q ss_pred CCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcce
Q psy8139 642 PLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLG 721 (1101)
Q Consensus 642 P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~ 721 (1101)
..||.++.+.....+++.|+|++|... .++.+.+
T Consensus 4 ~~pP~nl~~~~~~~~~v~l~W~pP~~~----------------------------------------------~~~~~~~ 37 (314)
T 3bpo_C 4 QPPVTNLSVSVENLCTVIWTWNPPEGA----------------------------------------------SSNCSLW 37 (314)
T ss_dssp CCCCEEEEEEEETTTEEEEEEECCSSC----------------------------------------------CCSSCCC
T ss_pred CCCCcceEEEeCCceEEEEEEcCCCCC----------------------------------------------CCCceEE
Confidence 467788888777777777777765422 2234667
Q ss_pred EEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEc-CCccCCCCCCCCcEEecCCCCCCCCCcccc--cc
Q psy8139 722 YLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAEN-VVGFSEPGPLSEPLTVTYQRSPAAAPSFIR--AL 798 (1101)
Q Consensus 722 Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n-~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~--~~ 798 (1101)
|.|.+.. .|.... ....+.+.+|.+++.|.|+|.|.+ ..|.|.+|++....+......|+.+|.++. ..
T Consensus 38 Y~v~~~~----~~~~~~----~~~~~~~~~~~~~~~y~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~ 109 (314)
T 3bpo_C 38 YFSHFGD----KQDKKI----APETRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWH 109 (314)
T ss_dssp EEECCC------CCCEE----ESSSEEEEECCCSSCEEEEEEECC---------CCEEEEECCCCC-CCSSCEEEEEEEE
T ss_pred EEEEecc----cCceEe----ccccEEEEEEcCCCcEEEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEEC
Confidence 8777643 222211 123456678999999999999964 677777776665343344577888888876 33
Q ss_pred cccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCce---eeeec--cccccCCCC
Q psy8139 799 HDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDY---DIVET--NEHTGTGAP 873 (1101)
Q Consensus 799 ~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~---~~v~~--~~~~~~~~~ 873 (1101)
..+++.+.|.|+... +... .|.+.|+..+. ..+.. ..... .......+.
T Consensus 110 ~~~~~~c~W~~~~~~-------------~~~~------------~Y~l~y~~~~~-~~~~~C~~~~~~~~~~~c~~~~~~ 163 (314)
T 3bpo_C 110 NLSYMKCSWLPGRNT-------------SPDT------------NYTLYYWHRSL-EKIHQCENIFREGQYFGCSFDLTK 163 (314)
T ss_dssp TTTEEEEEEECCC----------------CCC------------CEEEEEEESSC-SSCEECCCEEEETTEEEEEEECCC
T ss_pred CCCeEEEEECCCCCC-------------CCCc------------cEEEEEEeCCC-CccccCcCeecCCCeEEEEECCCC
Confidence 456778889875432 1233 67776654432 12211 11100 111111111
Q ss_pred CCCCCccCcccce--eeccccccc--CceeecccCCCCccCCCCCChhhhhhhhhhhccc-cccccccchhhcccccchh
Q psy8139 874 SDNENESDYFPEK--TIDESVYGY--DTIVYGYDSDDLDRHYPTLDEEEEEEDRESLVKD-RESSVKGKEEEAKVIKDDE 948 (1101)
Q Consensus 874 ~~l~~~~~~t~Y~--V~a~n~~G~--~~~v~~~t~e~~P~~~P~~v~~~~~~~n~t~v~v-p~~~~nG~i~gY~I~~~~~ 948 (1101)
+ ....++.|. |.|.|..|. +..+.....+.+...||.++++. ...++..|.| ||...++.+.+|.|
T Consensus 164 --~-~~~~~~~y~~~V~a~n~~G~~~~~~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev----- 234 (314)
T 3bpo_C 164 --V-KDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEV----- 234 (314)
T ss_dssp -----------CCEEEEEEETTSCSCCEEEEECSSSSEECCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEE-----
T ss_pred --c-cccceeEEEEEEEEEcCCCceecccEEEehhheEeeCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEE-----
Confidence 0 011355666 999999987 33333333444555799999997 4223444455 55556777889999
Q ss_pred hhhhccccccccccc------------ccCCceeEeecCCCCCCCceeec
Q psy8139 949 YYENLGDVLTKKYSL------------PVNSDIQIKIDKPDDEPDYVIKG 986 (1101)
Q Consensus 949 ~y~~~~~~~~~~~~l------------~~~~~~~~~i~~~~~~~~~~~~~ 986 (1101)
.|+..++........ .......++|.+|.+|+.|.|..
T Consensus 235 ~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qV 284 (314)
T 3bpo_C 235 EVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRI 284 (314)
T ss_dssp EEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEE
T ss_pred EEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEE
Confidence 888776543322111 11356688999999999999998
No 291
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.35 E-value=2.7e-12 Score=135.03 Aligned_cols=141 Identities=17% Similarity=0.163 Sum_probs=81.6
Q ss_pred cceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEec-CCCC--CCccEEEEecCCeEEEEeecCCCCCCcccceeE
Q psy8139 601 DRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTD-RPLP--PGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYI 677 (1101)
Q Consensus 601 ~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~-~P~~--P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~ 677 (1101)
...+++++.+|.+++.|.|+|.|.|..|.+..+..+.+.. .+.+ |..+.....+.+++.|+|.+|..+|| +|++|.
T Consensus 43 ~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~~~~~~~~sv~l~W~~P~~~~G-~i~~Y~ 121 (232)
T 4go6_B 43 PDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSG-KIIEYS 121 (232)
T ss_dssp ------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEEEEEEETTEEEEEEECCSCCSS-CCCEEE
T ss_pred CCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeeeEEecCCCEEEEEEeCCCCCCC-ceeeEE
Confidence 3456789999999999999999999999887655544443 2222 22334455677888888888876665 667777
Q ss_pred EEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccc-------cCccEEEEc
Q psy8139 678 VEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHM-------VEDTELMVS 750 (1101)
Q Consensus 678 v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~-------~~~~~~~i~ 750 (1101)
|+|....+........ . ......|..+.... .....+.+.
T Consensus 122 v~~~~~~~~~~~~~~~--------------------~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 168 (232)
T 4go6_B 122 VYLAIQSSQAGGELKS--------------------S-------------TPAQLAFMRVYCGPSPSCLVQSSSLSNAHI 168 (232)
T ss_dssp EEEEEC----------------------------------------------CCEEEEEEEEESSSEEEEEHHHHTTBCB
T ss_pred EEEEECCCCCcceeee--------------------c-------------cCCceeeEEEEeccCceEEEEccccEEeee
Confidence 6663321111000000 0 00000111111110 122233456
Q ss_pred CCCCCceEEEEEEEEcCCccCCCCC
Q psy8139 751 GLEPGWRYQFRITAENVVGFSEPGP 775 (1101)
Q Consensus 751 ~L~p~t~Y~~~V~A~n~~G~g~~S~ 775 (1101)
+|.+++.|.|+|.|.|.+|.|++|+
T Consensus 169 ~L~~~t~Y~frV~A~N~~G~Gp~S~ 193 (232)
T 4go6_B 169 DYTTKPAIIFRIAARNEKGYGPATQ 193 (232)
T ss_dssp EESSSEEEEEEEEEECSSCBCCCEE
T ss_pred cCccCCceEEEEEEECCCcCCCCcc
Confidence 8999999999999999999988754
No 292
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.35 E-value=1.7e-11 Score=128.12 Aligned_cols=169 Identities=12% Similarity=0.072 Sum_probs=114.9
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E---Eee--------------cCCcEEEEec--CCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F---EIF--------------SSRRQRIVTD--NDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~---~~~--------------~~~~~~~~~~--~~~~~l~I~~l 515 (1101)
|..+.+..|++++|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+ .+..+|+|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 4457889999999999998865 5789999842 1 111 1245665543 34568999999
Q ss_pred CCCCCEEEEEEEEeCCCc---eEEEEEEeeccC----CccccCCCCCCCeEEeeCCEEEEEEEEeec-CC--CeeEEEEC
Q psy8139 516 ALMDEGEIKCTATNRAGH---SITKARLRLEAP----PTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP--PTARWLHN 585 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~g~---~~~s~~l~V~~~----p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~--~~v~W~~~ 585 (1101)
..+|+|.|.|.+.+..+. ....+.|.|... |.+...+. ..+..|+.+.|.|.+.+. |. +.+.|+++
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~----~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~ 162 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTL----PPALSSDPVIIGCLIHDYFPSGTMNVTWGKS 162 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECC----CSSSCCSSEEEEEEEEEEBSCCCEEEEESCC
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeec----ccccCCCcEEEEEEEEeEECCCcEEEEEecC
Confidence 999999999999997653 122356777642 33322111 123568899999999987 65 79999998
Q ss_pred CeecCCC-CceEEEeecc---eEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 586 GEPLTSG-GRYEITHTDR---YLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 586 g~~l~~~-~~~~~~~~~~---~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
+..+... ........+. .+.|.|......|.|.|+|.|.|..|...
T Consensus 163 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 163 GKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 8765210 0000101111 23588888888899999999999988643
No 293
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.2e-12 Score=121.95 Aligned_cols=108 Identities=31% Similarity=0.560 Sum_probs=85.6
Q ss_pred CCCceeEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEE
Q psy8139 627 LGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTI 706 (1101)
Q Consensus 627 ~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l 706 (1101)
.|..+....+.+.++|++|.++.+..++.+++.|+|.+|.+++
T Consensus 3 ~G~~~~~~~v~~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g------------------------------------- 45 (120)
T 2yux_A 3 SGSSGASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDG------------------------------------- 45 (120)
T ss_dssp CCCCCCCCCCCCCCCCCCCSCEEEEEEETTEEEEEECCCSCCC-------------------------------------
T ss_pred CCcccEEEEEEeecCCCcCCCCEEEEecCCEEEEEEcCCCcCC-------------------------------------
Confidence 4555666777777899999999888888888888888765443
Q ss_pred EeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 707 RWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 707 ~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
|.+|++|.|+|+..+...|..+... ...++++|.+|.|++.|.|+|.|.|..|.|++|..+..++
T Consensus 46 ---------g~~i~~Y~v~~~~~~~~~w~~~~~~-~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~ 110 (120)
T 2yux_A 46 ---------NAAITGYTIQKADKKSMEWFTVIEH-YHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESA 110 (120)
T ss_dssp ---------SSCCCCCCEEEEETTTCCCEEEESS-CCSSCCEECCCCSSEEEEEEECCCSSSCSCSSCEECSSCE
T ss_pred ---------CCCceEEEEEEEECCCCceEEeeec-CCcCEEEECCCCCCCEEEEEEEEeeCCcCCCCccCcCCce
Confidence 3567788888887777788776432 5678899999999999999999999999999987665443
No 294
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=2.5e-12 Score=121.32 Aligned_cols=116 Identities=28% Similarity=0.384 Sum_probs=82.5
Q ss_pred eEEEEEEecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCC
Q psy8139 632 ASFLVTVTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPP 711 (1101)
Q Consensus 632 ~s~~l~v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP 711 (1101)
..+.+.+.++|++|.++.+..++.+++.|+|.+|.
T Consensus 7 ~~~~~~v~~~P~~P~~~~~~~~~~~sv~l~W~p~~--------------------------------------------- 41 (127)
T 1uey_A 7 GPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGD--------------------------------------------- 41 (127)
T ss_dssp CCCCCCCCCSCCCCEEEEEECCSSSCEEEEEECCC---------------------------------------------
T ss_pred EEEEEEeecCCcCCCCcEEEEccCCEEEEEEECCC---------------------------------------------
Confidence 34556677888999888887777778888887542
Q ss_pred CCCCCCCcceEEEEEEeCC--CCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCC
Q psy8139 712 EYDGGSPVLGYLVEHRRTG--SPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPA 789 (1101)
Q Consensus 712 ~~~~~~~i~~Y~V~~~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~ 789 (1101)
+++++|++|.|+|+... ...|..+.......+. .+.+|.|++.|.|+|.|.|..|.|++|..+..+++ .+..|.
T Consensus 42 --~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~-~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T-~~~~P~ 117 (127)
T 1uey_A 42 --DNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTT-AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLT-KASEPD 117 (127)
T ss_dssp --CCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCE-EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEEC-CCSSCS
T ss_pred --CCCCCceEEEEEEEECCCCCCccEEEeeeCCCceE-EEecCCCCCEEEEEEEEEeCCccCCccccccceEc-CCCCCC
Confidence 33445777777777653 3467665543344455 57799999999999999999999999887533332 236777
Q ss_pred CCCcccc
Q psy8139 790 AAPSFIR 796 (1101)
Q Consensus 790 ~~p~~~~ 796 (1101)
.+|.++.
T Consensus 118 ~~P~~v~ 124 (127)
T 1uey_A 118 KNPTSGP 124 (127)
T ss_dssp SCSSCCC
T ss_pred CCCceeE
Confidence 7787664
No 295
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.34 E-value=4.2e-12 Score=127.86 Aligned_cols=154 Identities=14% Similarity=0.159 Sum_probs=107.2
Q ss_pred ceeEEccCCeEEEEEEEec-cCCCeEEEEEC-CEEee------------cC--CcEEEEecCCeeEEEEeecCCCCCEEE
Q psy8139 460 HDTTALEDEKVEFTVQVEG-IPTPKVSWYKD-GFEIF------------SS--RRQRIVTDNDISTLIIHQAALMDEGEI 523 (1101)
Q Consensus 460 ~~~~v~~g~~v~L~C~~~g-~p~~~v~W~~~-g~~~~------------~~--~~~~~~~~~~~~~l~I~~l~~~d~g~Y 523 (1101)
..+.+.+|++++|.|.+.+ .+.+.|.|++. +..+. .. .++.+ .....+|.|.+++..|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEE
Confidence 4567899999999998854 34679999994 32221 11 33443 12334799999999999999
Q ss_pred EEEEEeCCCceEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecce
Q psy8139 524 KCTATNRAGHSITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRY 603 (1101)
Q Consensus 524 ~C~a~n~~g~~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 603 (1101)
+|.+.+.. .......|.|..++..+ .....+..+.|.|.+.+.|.|.+.|++++..+.. ...
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~~~P--------~i~~~~~~v~L~C~~~~gp~p~i~W~~~~~~l~~---------~~~ 146 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMVSKP--------MIYWECSNATLTCEVLEGTDVELKLYQGKEHLRS---------LRQ 146 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCCCCC--------EEEEEGGGTEEEEECSSCTTCEEEEEETTEEEEE---------ESS
T ss_pred EEEEEcCC-eEEEEEEEEEECCCCCC--------EEEecCCCEEEEEEeCCCCCCEEEEEECCeECcC---------CCC
Confidence 99998766 44556778887653211 1223456699999994339999999999987641 113
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCCCceeEEE
Q psy8139 604 LNLRISDARRADRGEYQAHGVNSLGEDVASFL 635 (1101)
Q Consensus 604 ~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~ 635 (1101)
.++.+.. ..|.|.|+|.|.|..|.......
T Consensus 147 ~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 147 KTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp SEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred CEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 3455532 67899999999999987655443
No 296
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.34 E-value=2.7e-11 Score=123.09 Aligned_cols=159 Identities=13% Similarity=0.108 Sum_probs=113.1
Q ss_pred eEEccCCeEEEEEEEeccCCC--eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEE
Q psy8139 462 TTALEDEKVEFTVQVEGIPTP--KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKAR 539 (1101)
Q Consensus 462 ~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~ 539 (1101)
+.+..|++++|.|.+ +.|.| .|.|.+.+..+ ..... ..+...|.|.+++.+|+|.|.|.|.|..|.....+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe--cCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 588999999999999 88888 99999854333 12222 344568999999999999999999999888778899
Q ss_pred EeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC----CeeEEEECCeecCCCCceE--EE-----e-ecc----
Q psy8139 540 LRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP----PTARWLHNGEPLTSGGRYE--IT-----H-TDR---- 602 (1101)
Q Consensus 540 l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~----~~v~W~~~g~~l~~~~~~~--~~-----~-~~~---- 602 (1101)
|.|..+|....... . ....|+.. |.|.+.+. |. +++.|++++.++....... +. . .+.
T Consensus 91 ltV~~~P~~~~i~~--~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (210)
T 1gsm_A 91 LLVYAFPNQLTVSP--A--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLF 165 (210)
T ss_dssp EEEEBCCSEEEEES--S--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCE
T ss_pred EEEEecCCCcEEcc--c--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEE
Confidence 99999886533111 0 34457777 99999985 63 4899999999986432111 10 0 001
Q ss_pred --eEEEEEccCCCCCCeEEEEEEEeCCCCce
Q psy8139 603 --YLNLRISDARRADRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 603 --~~sl~i~~l~~~~~y~y~c~A~N~~G~~~ 631 (1101)
+.++.+......+.+.|+|.|.+..-...
T Consensus 166 ~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~ 196 (210)
T 1gsm_A 166 RVTERWRLPPLGTPVPPALYCQATMRLPGLE 196 (210)
T ss_dssp EEEEEEECCCCCSSCCSEEEEEEEEEETTEE
T ss_pred EEEEEEeecCCcccCCceEEEEEEeeCCCCc
Confidence 22344445555666899999998764433
No 297
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.34 E-value=3.9e-12 Score=118.76 Aligned_cols=91 Identities=27% Similarity=0.419 Sum_probs=60.9
Q ss_pred EEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeec---ccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcE
Q psy8139 704 FTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRAS---PHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPL 780 (1101)
Q Consensus 704 i~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~ 780 (1101)
+.|+|++|..++|.+|++|.|+|+..+...|.... ......++++|.+|.|++.|.|+|.|+|..|.|++|....+.
T Consensus 23 v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~ 102 (122)
T 2e3v_A 23 AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 102 (122)
T ss_dssp EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEE
T ss_pred EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEeCCccCCCccccccc
Confidence 44455555455556688999999888877783211 122567899999999999999999999999999998776653
Q ss_pred EecCCCCCCCCCcccc
Q psy8139 781 TVTYQRSPAAAPSFIR 796 (1101)
Q Consensus 781 t~~~~~~P~~~p~~~~ 796 (1101)
+.. ..++.+|....
T Consensus 103 t~~--~~~P~~P~~~~ 116 (122)
T 2e3v_A 103 TQP--VREPSAPKLEG 116 (122)
T ss_dssp CCC--CCCCC------
T ss_pred ccC--CCCCCCCeecc
Confidence 332 34667776554
No 298
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.34 E-value=3.1e-13 Score=142.92 Aligned_cols=175 Identities=10% Similarity=0.095 Sum_probs=97.5
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--EEe---e---------cCCcEEEEecCCeeEEEEeecCC
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--FEI---F---------SSRRQRIVTDNDISTLIIHQAAL 517 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~~~---~---------~~~~~~~~~~~~~~~l~I~~l~~ 517 (1101)
.+.+...|..+.+..|++++|.|.+.+.|.+.+.|++++ ... . ...++.....++..+|.|.++..
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 344555677888999999999999999888899999843 111 0 01223222233345899999999
Q ss_pred CCCEEEEEEEEeCCCceEE-EEEEeecc---CCccccCCCCCCCeEEeeCCEEEEEEEEeecC-CC-eeEEEECCeecCC
Q psy8139 518 MDEGEIKCTATNRAGHSIT-KARLRLEA---PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMP-PP-TARWLHNGEPLTS 591 (1101)
Q Consensus 518 ~d~g~Y~C~a~n~~g~~~~-s~~l~V~~---~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p-~~-~v~W~~~g~~l~~ 591 (1101)
.|+|.|.|.+.|..+.... ...|.|.. +|.+...+.. ..+..|+.++|.|.+.|.+ .+ .+.|+++|..+..
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~---~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 179 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPS---SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 179 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCC---HHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----C
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCC---HHhhcCCceEEEEEEccccCCceEEEEEECCeeCCC
Confidence 9999999999987654322 23455554 3433321110 0122588999999999854 43 7999999987764
Q ss_pred CCceE--EEeec-----ceEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 592 GGRYE--ITHTD-----RYLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 592 ~~~~~--~~~~~-----~~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
+.... ..... ....|.|......|.|.|+|.|.|....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 180 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp CEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 41111 11111 1346888888888999999999997654
No 299
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.34 E-value=1.1e-11 Score=131.71 Aligned_cols=140 Identities=21% Similarity=0.274 Sum_probs=103.1
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeee-ecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFI-RALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~-~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
..+|.|.+++..|.|.|+|.|.|..|... ..+.+.+...+..+|.+. ..+....+..|+.++|.|.+.+.|.+.
T Consensus 71 ~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~-----~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~ 145 (241)
T 3grw_A 71 QWSLVMESVVPSDRGNYTCVVENKFGSIR-----QTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPH 145 (241)
T ss_dssp GTEEEECSCCGGGCEEEEEEEEETTEEEE-----EEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCE
T ss_pred ceEEEEEeCCcccCEEEEEEEeecCCceE-----EEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCE
Confidence 45799999999999999999999877542 235555554444445544 346777889999999999999999999
Q ss_pred EEEEE----CCEEeecCCcEEEE--------ecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccc
Q psy8139 484 VSWYK----DGFEIFSSRRQRIV--------TDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIR 549 (1101)
Q Consensus 484 v~W~~----~g~~~~~~~~~~~~--------~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~ 549 (1101)
+.|++ ++..+......... .......|.|.++...|.|.|+|.|.|..|....++.|.|..+|...
T Consensus 146 v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 146 IQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-------
T ss_pred EEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCC
Confidence 99999 77666543321111 01134589999999999999999999999999999999999887654
No 300
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.34 E-value=2.1e-11 Score=123.06 Aligned_cols=120 Identities=18% Similarity=0.259 Sum_probs=97.2
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC-eE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP-KV 484 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~-~v 484 (1101)
..|.|.+++..|.|.|+|.|.|..|... +..+.+.+. .+|.+...+....+..|+.+.|.|.+.|.|.| .+
T Consensus 60 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v 131 (182)
T 1rhf_A 60 GFLSLKSVERSDAGRYWCQVEDGGETEI----SQPVWLTVE----GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTI 131 (182)
T ss_dssp EEEEESSCCGGGCEEEEEEESSCTTCEE----CCCEEEEEE----CSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEE
T ss_pred EEEEEeecCcccCeEEEEEEEcCCCcEE----EEEEEEEEe----cCCeEEecCcceEecCCCEEEEEeEecCCCCCCEE
Confidence 6799999999999999999999755422 233555554 57888888888899999999999999999999 99
Q ss_pred EEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EEEEee
Q psy8139 485 SWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KARLRL 542 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~~l~V 542 (1101)
.|++++..+..... ....|.|.++ .|+|.|+|.|.|..|...+ ++.|.|
T Consensus 132 ~W~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 132 VWWRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEcCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 99999988754321 3458999988 5899999999999998754 566655
No 301
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=3.7e-12 Score=118.72 Aligned_cols=83 Identities=24% Similarity=0.402 Sum_probs=71.7
Q ss_pred CCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCC-CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCC
Q psy8139 698 SLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPL 776 (1101)
Q Consensus 698 ~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 776 (1101)
.++.+++.|+|++|..++|.+|.+|.|+|+..+. ..|..+.. ...++++|.+|.|++.|.|+|+|.|..|.|++|..
T Consensus 29 ~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~ 106 (120)
T 2crm_A 29 KIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS--GATREHLCDRLNPGCFYRLRVYCISDGGQSAVSES 106 (120)
T ss_dssp EEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC--SSCSEEEECSCCTTSCEEEEEEEEETTEECCCCCC
T ss_pred ccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEe--ccccEEEECCCCCCCEEEEEEEEEcCCccCCCccc
Confidence 4678899999999988878899999999998876 58887755 56889999999999999999999999999998876
Q ss_pred CCcEEe
Q psy8139 777 SEPLTV 782 (1101)
Q Consensus 777 s~~~t~ 782 (1101)
..+.|.
T Consensus 107 ~~~~T~ 112 (120)
T 2crm_A 107 LLVQTP 112 (120)
T ss_dssp CCCCCC
T ss_pred EEEEcC
Confidence 655543
No 302
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.33 E-value=1.4e-11 Score=131.10 Aligned_cols=176 Identities=18% Similarity=0.185 Sum_probs=115.7
Q ss_pred CeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEE--------------CCEEeecC----CcEEEEec-CCeeEEEEe
Q psy8139 453 PSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYK--------------DGFEIFSS----RRQRIVTD-NDISTLIIH 513 (1101)
Q Consensus 453 P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~--------------~g~~~~~~----~~~~~~~~-~~~~~l~I~ 513 (1101)
+.+...|..+.+..|++++|.| ..+.+.+.+.|++ ++...... .++.+... .+..+|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 3455667788999999999999 6778888999998 22222111 55555542 345689999
Q ss_pred ecCCCCCEEEEEEEEeCC----CceEEEEEEeecc------CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeE
Q psy8139 514 QAALMDEGEIKCTATNRA----GHSITKARLRLEA------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TAR 581 (1101)
Q Consensus 514 ~l~~~d~g~Y~C~a~n~~----g~~~~s~~l~V~~------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~ 581 (1101)
++...|+|.|.|.+.+.. +.......|.|.. +|.+.... +....+..|..+.|.|.+.|. |.+ .+.
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~--~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 159 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFE--PSEAEISHTQKATLVCLATGFYPDHVELS 159 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEEC--CCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeC--CCcccccCCCceEEEEEEeeEeCCCeEEE
Confidence 999999999999999632 2222335666653 33222110 011123358999999999984 444 899
Q ss_pred EEECCeecCCCCceEEEe-------ecc----eEEEEEccCCCCC-CeEEEEEEEeCCCCce
Q psy8139 582 WLHNGEPLTSGGRYEITH-------TDR----YLNLRISDARRAD-RGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 582 W~~~g~~l~~~~~~~~~~-------~~~----~~sl~i~~l~~~~-~y~y~c~A~N~~G~~~ 631 (1101)
|+++|..+..+....... .++ ...|.|......| .|.|+|.|.|......
T Consensus 160 W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~~ 221 (245)
T 4ei6_B 160 WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCCc
Confidence 999998886532211000 011 2347777777667 8999999999765543
No 303
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=3.6e-12 Score=116.41 Aligned_cols=93 Identities=22% Similarity=0.255 Sum_probs=75.0
Q ss_pred CCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEE
Q psy8139 684 PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRIT 763 (1101)
Q Consensus 684 ~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 763 (1101)
+.+|+.|........++.++++|+|++|..++ ++|.+|.|+|+..+...|..+.. +..++++|.+|.|++.|.|||.
T Consensus 7 ~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~frV~ 83 (110)
T 2db8_A 7 GPVPATPILQLEECCTHNNSATLSWKQPPLST-VPADGYILELDDGNGGQFREVYV--GKETMCTVDGLHFNSTYNARVK 83 (110)
T ss_dssp CCCCCCCBCCCCCCSCSSSEEEECCBCCTTCC-SCCSEEEEEECCSSSSCCEEEEE--ESCSCEEEECCCSSSCCEEEEE
T ss_pred CCCCCCccccceeeccCCCEEEEEECCCCCCC-CCccEEEEEEEeCCCCceEEEEe--CCcCEEEECCCCCCCEEEEEEE
Confidence 34566665555455678999999999987554 78999999999877678877654 5778999999999999999999
Q ss_pred EEcCCccCCCCCCCCc
Q psy8139 764 AENVVGFSEPGPLSEP 779 (1101)
Q Consensus 764 A~n~~G~g~~S~~s~~ 779 (1101)
|.|..|.|++|+...+
T Consensus 84 A~n~~G~s~~S~~~~~ 99 (110)
T 2db8_A 84 AFNKTGVSPYSKTLVL 99 (110)
T ss_dssp EECSSCBCCCCSCEEC
T ss_pred EEeCCcCCCCCCCEEE
Confidence 9999999888765433
No 304
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.33 E-value=2.9e-12 Score=133.79 Aligned_cols=177 Identities=17% Similarity=0.242 Sum_probs=111.3
Q ss_pred CCCeeeecCceeE--EccCCeEEEEEEEecc---CC-CeEEEEECCEEeecCCcEEEE-ecC----CeeEEEEeecCCCC
Q psy8139 451 AAPSFIRALHDTT--ALEDEKVEFTVQVEGI---PT-PKVSWYKDGFEIFSSRRQRIV-TDN----DISTLIIHQAALMD 519 (1101)
Q Consensus 451 ~~P~~~~~p~~~~--v~~g~~v~L~C~~~g~---p~-~~v~W~~~g~~~~~~~~~~~~-~~~----~~~~l~I~~l~~~d 519 (1101)
.+|.+...|.... +..|++++|.|.+.|. |. +.|+|++++..+......... ..+ ..+.|.|.++...|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 4555554444444 7899999999999887 33 789999999776432111000 011 12479999999999
Q ss_pred CEEEEEEEEeCCCceEEEEEE----eeccCCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEEECCeecCCCC
Q psy8139 520 EGEIKCTATNRAGHSITKARL----RLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWLHNGEPLTSGG 593 (1101)
Q Consensus 520 ~g~Y~C~a~n~~g~~~~s~~l----~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~~g~~l~~~~ 593 (1101)
+|.|+|.|.|..+.......+ .+..+|.+...+.... ...|..+.|.|.+.| .|.+ .|+|+++|..+....
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~---~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 164 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAE---QLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYK 164 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGG---GTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEE
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChH---HhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCce
Confidence 999999999987754222222 3445665533222111 124889999999998 5655 999999998874321
Q ss_pred ceEEE-eecc----eEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 594 RYEIT-HTDR----YLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 594 ~~~~~-~~~~----~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
..... ..++ ...+.|......+.|.|+|.|.|.....
T Consensus 165 ~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 165 DTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSGG
T ss_pred ecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCCC
Confidence 11111 1111 1234444444445899999999986543
No 305
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.33 E-value=6.7e-12 Score=127.86 Aligned_cols=128 Identities=16% Similarity=0.190 Sum_probs=101.0
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
....|.|.+++..|.|.|+|.|.|..|.. .+..+.+.+. .+|.+...|....+..|+++.|.|.+.|.|.+.
T Consensus 60 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~ 131 (191)
T 1epf_A 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQ----SEATVNVKIF----QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPT 131 (191)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTTEE----EEEEEEEEEE----CCSEEEECCSSEECCTTSCEEECCEEECSSCCE
T ss_pred CceEEEEccCCcccCEEEEEEEEcCCCcc----eEEEEEEEee----cCceEecCCCcEeecCCCeEEEEEEECCCCCCE
Confidence 34689999999999999999999987532 1234455543 678888888888999999999999999999999
Q ss_pred EEEEECCEEeecC--CcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEee
Q psy8139 484 VSWYKDGFEIFSS--RRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRL 542 (1101)
Q Consensus 484 v~W~~~g~~~~~~--~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V 542 (1101)
+.|++++..+... .++..... + .|.|.++...|+|.|+|.|.|..|.......+.|
T Consensus 132 v~W~~~~~~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 132 IIWKHKGRDVILKKDVRFIVLSN-N--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEEEETTEEGGGGCCTTEEECTT-S--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred EEEEECCEEeeccCCceEEEecC-C--eEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 9999999988643 23333322 2 7999999999999999999998876655544443
No 306
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.33 E-value=1.6e-11 Score=124.73 Aligned_cols=126 Identities=19% Similarity=0.270 Sum_probs=97.7
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVS 485 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~ 485 (1101)
..|.|.++...|.|.|+|.|.|..|... +..+.+.+. .+|.+...+....+..|+++.|.|.+.|.|.|.+.
T Consensus 58 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~----~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~ 129 (189)
T 2v44_A 58 SRLTIYNANIEDAGIYRCQATDAKGQTQ----EATVVLEIY----QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVS 129 (189)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSCEE----EEEEEEEEE----CCCEEESCCCSEEEETTSCEEECCEEECSSCCEEE
T ss_pred EEEEEccCCcccCeEEEEEEEeCCCCcE----EEEEEEEEe----cCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEE
Confidence 4899999999999999999999877542 233444443 55677666777889999999999999999999999
Q ss_pred EEECCEEeec--CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEee
Q psy8139 486 WYKDGFEIFS--SRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRL 542 (1101)
Q Consensus 486 W~~~g~~~~~--~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V 542 (1101)
|++++..+.. ..++.....+ .|.|.++...|+|.|+|.|.|..|.......+.|
T Consensus 130 W~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 130 WLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp EEEEC--CEECCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEECCcEEeccCCCCEEEecCC---cEEEEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 9999987753 3444443332 7999999999999999999999877665544333
No 307
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.33 E-value=1.1e-11 Score=135.65 Aligned_cols=167 Identities=11% Similarity=0.121 Sum_probs=117.2
Q ss_pred cCceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E---Eee--------------cCCcEEEEe--cCCeeEEEEee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F---EIF--------------SSRRQRIVT--DNDISTLIIHQ 514 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~---~~~--------------~~~~~~~~~--~~~~~~l~I~~ 514 (1101)
.|..+.+.+|++++|.|.+.+.| .+.+.|++.. . .+. ...++.+.. .++..+|+|.+
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 45577899999999999998876 5789999842 1 110 113444433 23456899999
Q ss_pred cCCCCCEEEEEEEEeCC-Cce----EEEEEEeeccC----------------CccccCCCCCCCeEEeeCCEEEEEEEEe
Q psy8139 515 AALMDEGEIKCTATNRA-GHS----ITKARLRLEAP----------------PTIRLPKQYEDGLLFEMGEIIKLKVSMA 573 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~-g~~----~~s~~l~V~~~----------------p~~~~~~~~~~~~~v~~g~~~~l~c~~~ 573 (1101)
+..+|+|.|.|.+.|.. |.. ...+.|.|..+ +.+.. .+..+.+.+|++++|.|.+.
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~---~p~~~~v~~G~~v~L~C~~~ 184 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQ---SPSSLAVSAGEKVTMSCKSS 184 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEEC---SCSEEEEETTSCEEEEEEES
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEc---CCCEEEEcCCCcEEEEEEcC
Confidence 99999999999999874 211 12346777651 11211 12345788999999999999
Q ss_pred ecCCC------eeEEEECC--eecC------------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCC
Q psy8139 574 GMPPP------TARWLHNG--EPLT------------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSL 627 (1101)
Q Consensus 574 g~p~~------~v~W~~~g--~~l~------------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~ 627 (1101)
+.+.+ .+.|+++. .... ...++.....+...+|.|.++...|+|.|.|.|.|..
T Consensus 185 ~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 185 QSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 88765 89999852 2110 1345555545556789999999999999999999854
No 308
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.33 E-value=1.8e-12 Score=119.12 Aligned_cols=94 Identities=23% Similarity=0.407 Sum_probs=71.8
Q ss_pred CCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeC-CCCCceeecccc-----------cCccEEEEcCC
Q psy8139 685 GPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRT-GSPYWVRASPHM-----------VEDTELMVSGL 752 (1101)
Q Consensus 685 ~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~-~~~~~~~~~~~~-----------~~~~~~~i~~L 752 (1101)
.+|++|. ...++.++++|+|.+|..++ .+|++|.|+|+.. .+..|..+.... +..++++|.+|
T Consensus 4 ~pP~~P~----v~~~~~~sv~L~W~~P~~~G-~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 78 (115)
T 2ic2_A 4 YPPTPPN----VTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDL 78 (115)
T ss_dssp CCCCCCE----EEECC---EEEEEEEECCSS-CCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSC
T ss_pred CCCCcCE----eEEEeCCEEEEEEcCCCCCC-CCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCC
Confidence 3566665 33678999999999997665 8899999999987 456888654321 33468899999
Q ss_pred CCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 753 EPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 753 ~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
.|++.|.|||.|.|.+|.|.+|..+..+.+.
T Consensus 79 ~p~t~Y~FRV~A~N~~G~~~pS~~S~~~~~~ 109 (115)
T 2ic2_A 79 KPQHTYRFRILAVYSNNDNKESNTSAKFYLQ 109 (115)
T ss_dssp CSSEEEEEEEEEEETTSCEEECCCCCCEEEC
T ss_pred CCCCEEEEEEEEEeCCCCCCCCCCCCCEEeC
Confidence 9999999999999999999999988887764
No 309
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.33 E-value=6.2e-12 Score=130.46 Aligned_cols=136 Identities=19% Similarity=0.252 Sum_probs=99.3
Q ss_pred eEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCCeEE
Q psy8139 407 ELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTPKVS 485 (1101)
Q Consensus 407 ~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~~v~ 485 (1101)
.+.|.+++..|.|.|+|.|.|..|.... ..+.+.+.. .+|.+...+....+..|+.++|.|.+ .+.|.+.+.
T Consensus 73 ~l~i~~~~~~d~G~Y~C~~~n~~g~~~~----~~~~l~V~~---~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~ 145 (212)
T 2v9r_A 73 RIVHGRKSRPDEGVYVCVARNYLGEAVS----HDASLEVAI---LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTIS 145 (212)
T ss_dssp SCCCCSSCCCSCEEEEEEEEETTEEEEC----CCEEEEECE---ECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEE
T ss_pred EEEecCCCcccCeEEEEEEECCCCceee----cceEEEEEe---ccccceeCCCceEecCCCcEEEEEecCCCCCCCEEE
Confidence 3455677999999999999998775421 224444432 23445566777889999999999998 899999999
Q ss_pred EEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEE-EEEeeccCCccccCC
Q psy8139 486 WYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITK-ARLRLEAPPTIRLPK 552 (1101)
Q Consensus 486 W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s-~~l~V~~~p~~~~~~ 552 (1101)
|++++..+...........+ .|.|.++...|.|.|+|.|.|..|...+. +.|.|..+|.+...|
T Consensus 146 W~~~~~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 146 WKKDGSPLDDKDERITIRGG---KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210 (212)
T ss_dssp EEETTEEECTTSTTEEEETT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--------
T ss_pred EEECCccCCCCcceEEccCC---eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhhc
Confidence 99999988765433333332 89999999999999999999999987654 889999888775443
No 310
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.32 E-value=1e-11 Score=130.41 Aligned_cols=166 Identities=10% Similarity=0.092 Sum_probs=112.2
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E-E--ee--------------cCCcEEEEec--CCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F-E--IF--------------SSRRQRIVTD--NDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~-~--~~--------------~~~~~~~~~~--~~~~~l~I~~l 515 (1101)
|..+.+..|++++|.|.+.+.| .+.+.|++.. . . +. ...++.+..+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4456789999999999999876 6789999842 1 1 10 1245555543 34568999999
Q ss_pred CCCCCEEEEEEEEeCCC-----c---eEEEEEEeecc----CCcccc-CCCCCCCeEEeeCCEEEEEEEEeec-CCC-ee
Q psy8139 516 ALMDEGEIKCTATNRAG-----H---SITKARLRLEA----PPTIRL-PKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TA 580 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~g-----~---~~~s~~l~V~~----~p~~~~-~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v 580 (1101)
...|+|.|.|.+.|..| . ....+.|.|.. +|.+.. ++.. .+..|+.+.|.|.+.|. |.+ .+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~----~~~~g~~v~L~C~~~g~~P~p~~v 162 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS----KSTSGGTAALGCLVKDYFPEPVTV 162 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT----TCCCCCEEEEEEEEEEEBSSCCEE
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc----cccCCCcEEEEEEEEeEECCCeEE
Confidence 99999999999999865 2 11235777765 233221 2111 13569999999999986 766 99
Q ss_pred EEEECCeecCCCCc-eEEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 581 RWLHNGEPLTSGGR-YEITHTD---RYLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 581 ~W~~~g~~l~~~~~-~~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
.|++++..+..... ......+ ..+.|.|......+ |.|+|.|.|..+.
T Consensus 163 ~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 163 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (225)
T ss_dssp ECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGT
T ss_pred EEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCC
Confidence 99998865421100 0011111 13468898888778 9999999997654
No 311
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.32 E-value=2.6e-11 Score=124.21 Aligned_cols=124 Identities=13% Similarity=0.128 Sum_probs=81.1
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
....|.|.++++.|+|.|+|.|.|..|.+.. +..+.+.+... ..+|.+...| ...+.+|++++|.|.+.+.| +.
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~---s~~~~l~V~~~-~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~ 129 (196)
T 2d3v_A 56 NKARFSIPSMTEHHAGRYRCYYYSPAGWSEP---SDPLELVVTGF-YNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DR 129 (196)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEECBC---CCCEEEEEECS-SCCCEEEC------------CEEEEEESSCC-SE
T ss_pred cccEEEeccCChhHCeEEEEEEeCCCCcCCc---CccEEEEecCC-CCCCeEEccC-CccccCCCcEEEEEEcCCCC-CE
Confidence 4568999999999999999999998764432 34455655432 2356665544 35788999999999999998 89
Q ss_pred EEEEECCEEeecCCcEEEEe--cCCeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 484 VSWYKDGFEIFSSRRQRIVT--DNDISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~--~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
+.|+++|..+.......... ......|.|.++...|+|.|+|.|.|..+.
T Consensus 130 ~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 130 FILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp EEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred EEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCCC
Confidence 99999998764321111111 123468999999999999999999997653
No 312
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.32 E-value=2.5e-12 Score=120.53 Aligned_cols=96 Identities=26% Similarity=0.371 Sum_probs=70.9
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
++|++|.++.+..++.+++.|+|.+|. +++++|
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~p~~-----------------------------------------------~~~~~i 48 (124)
T 1wis_A 16 ELPGPPTNLGISNIGPRSVTLQFRPGY-----------------------------------------------DGKTSI 48 (124)
T ss_dssp CCCCCCEEEEEESCCSSCEEEEEECCC-----------------------------------------------CCSSCC
T ss_pred CCCccCCCCEEEEecCCEEEEEEECCC-----------------------------------------------CCCCcc
Confidence 466777777776666667777775442 344567
Q ss_pred ceEEEEEEe---CCCCCceeeccc--ccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEe
Q psy8139 720 LGYLVEHRR---TGSPYWVRASPH--MVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTV 782 (1101)
Q Consensus 720 ~~Y~V~~~~---~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~ 782 (1101)
++|.|+|+. .+...|..+... ....+.++|.+|.|++.|.|+|.|.|..|.|++|..+..+++
T Consensus 49 ~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T 116 (124)
T 1wis_A 49 SRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 116 (124)
T ss_dssp SEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEEC
T ss_pred cEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEc
Confidence 778787776 345577765432 356789999999999999999999999999999987765544
No 313
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.32 E-value=1.3e-11 Score=129.84 Aligned_cols=170 Identities=15% Similarity=0.183 Sum_probs=112.9
Q ss_pred CceeEEccCCeEEEEEEEeccCC----CeEEEEEC--CEE---ee-------------cCCcEEEEec--CCeeEEEEee
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPT----PKVSWYKD--GFE---IF-------------SSRRQRIVTD--NDISTLIIHQ 514 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~----~~v~W~~~--g~~---~~-------------~~~~~~~~~~--~~~~~l~I~~ 514 (1101)
|..+.+..|++++|.|.+.+.|. +.+.|++. +.. +. ...++.+... .+..+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 55678999999999999998775 78999874 221 11 1235555432 3456899999
Q ss_pred cCCCCCEEEEEEEEeCCC------c--e-EEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-e
Q psy8139 515 AALMDEGEIKCTATNRAG------H--S-ITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-T 579 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g------~--~-~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~ 579 (1101)
+...|+|.|.|.+.|..| . . ...+.|.|.. +|.+...+. ...+..|+.+.|.|.+.|. |.+ .
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~---~~~~~~g~~~~l~C~~~g~~P~p~~ 163 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAP---VCGDTTGSSVTLGCLVKGYFPEPVT 163 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC--------CCSEEEEEEEEEEEBSSCCE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecc---cccccCCCCEEEEEEEccEeCCCEE
Confidence 999999999999999765 1 1 1236777763 333321111 1134679999999999986 766 9
Q ss_pred eEEEECCeecCCCCceEEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCcee
Q psy8139 580 ARWLHNGEPLTSGGRYEITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 580 v~W~~~g~~l~~~~~~~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~ 632 (1101)
+.|++++..+.......+...+ ..+.|.|......+ |.|+|.|.|..|....
T Consensus 164 v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 164 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp EEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred EEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCE
Confidence 9999988654211111111111 14568888887755 9999999999887543
No 314
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.32 E-value=1.7e-12 Score=116.78 Aligned_cols=95 Identities=28% Similarity=0.397 Sum_probs=74.3
Q ss_pred CCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecc-cccCccEEEEcCCCCCceEEEEE
Q psy8139 684 PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASP-HMVEDTELMVSGLEPGWRYQFRI 762 (1101)
Q Consensus 684 ~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V 762 (1101)
+++|++|..+... ...++++|+|+||.. ++++|++|.|+|+. ++..|..+.. .....+++++.+|.|++.|.|||
T Consensus 5 pep~~pP~~l~v~--~~~~sv~L~W~pP~~-~~~~I~gY~vey~~-~~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV 80 (108)
T 1v5j_A 5 SSGLSPPRGLVAV--RTPRGVLLHWDPPEL-VPKRLDGYVLEGRQ-GSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRL 80 (108)
T ss_dssp CCCCCCCEEEEEE--ECSSSEEEEEECCSC-CSSCCCBEEEEEEE-TTCCCEEEEEEECSSCCEEECCCCCTTSCEECCB
T ss_pred CCCCCCCcceEEE--EeCCEEEEEECCCCC-CCCCCcEEEEEEEe-CCCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEE
Confidence 3455566544322 245789999999974 77899999999998 5567986543 23678999999999999999999
Q ss_pred EEEcCCccCCCCCCCCcEEe
Q psy8139 763 TAENVVGFSEPGPLSEPLTV 782 (1101)
Q Consensus 763 ~A~n~~G~g~~S~~s~~~t~ 782 (1101)
.|+|..|.|+||+...+.|.
T Consensus 81 ~A~n~~G~s~pS~~~~v~T~ 100 (108)
T 1v5j_A 81 VAFAGSFVSDPSNTANVSTS 100 (108)
T ss_dssp EEEETTEEEEECSCCCCCCS
T ss_pred EEEcCCCCcCCCCCEEEEeC
Confidence 99999999999876666554
No 315
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.32 E-value=4e-12 Score=132.04 Aligned_cols=130 Identities=18% Similarity=0.241 Sum_probs=98.2
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~ 482 (1101)
...+|.|.+++..|+|.|+|.|.|..|... ..+.+.+. .+|.+...+....+..|+.++|.|.+ .|.|.+
T Consensus 82 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~-----~~~~l~V~----~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~ 152 (214)
T 3jz7_A 82 GDASINVTNLQLSDIGTYQCKVKKAPGVAN-----KKFLLTVL----VKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPL 152 (214)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEE-----EEEEEEEE----CCCBSCEEEEESCCBTTCCEEEEEECSBCCSSC
T ss_pred CcccEEEccCChhhCeEEEEEEEeCCCccc-----cEEEEEEE----cCCCCceeeeecceecCCcEEEEecCCCCCCCC
Confidence 356799999999999999999999877442 33455554 34444444444557899999999999 899999
Q ss_pred eEEEEECC--EEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCC
Q psy8139 483 KVSWYKDG--FEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPP 546 (1101)
Q Consensus 483 ~v~W~~~g--~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p 546 (1101)
.+.|++++ ..+..... . ......|.|.++...|+|.|+|.|.|..|....++.|.|..||
T Consensus 153 ~v~W~~~~~~~~~~~~~~--~--~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 153 QFEWQKLSDSQTMPTPWL--A--EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp EEEEEECSTTCCCCGGGG--G--GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred EEEEEECCCCCccCccce--e--ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 99999954 33322111 0 1122389999999999999999999999999888999887543
No 316
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.32 E-value=1.6e-11 Score=114.55 Aligned_cols=97 Identities=29% Similarity=0.524 Sum_probs=75.3
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
.+|.+|.++.+..++.+++.|+|.++ .+++.+|
T Consensus 16 ~~P~~P~~~~~~~~~~~sv~l~W~p~-----------------------------------------------~~~~~~i 48 (121)
T 1x4z_A 16 SPPEAPDRPTISTASETSVYVTWIPR-----------------------------------------------GNGGFPI 48 (121)
T ss_dssp CCCCCCCCCEEEECCSSEEEEECCCC-----------------------------------------------CCTTSCC
T ss_pred CCCccCCCCEEEEccCCEEEEEEECC-----------------------------------------------CCCCCcc
Confidence 56777777777776777777777632 2345568
Q ss_pred ceEEEEEEeCC-CCCceeeccc-ccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 720 LGYLVEHRRTG-SPYWVRASPH-MVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 720 ~~Y~V~~~~~~-~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
++|.|+|+..+ ...|..+... ....+.++|.+|.|++.|.|+|+|.|..|.|++|..+..+++.
T Consensus 49 ~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~ 114 (121)
T 1x4z_A 49 QSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVS 114 (121)
T ss_dssp CEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECC
T ss_pred eEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcC
Confidence 88888888876 5678766432 3577899999999999999999999999999999988777654
No 317
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.32 E-value=4.8e-12 Score=130.88 Aligned_cols=170 Identities=16% Similarity=0.219 Sum_probs=109.4
Q ss_pred ecCceeE-EccCCeEEEEEEEeccC----CCeEEEEECCEEeecCCc-EEEEecC----CeeEEEEeecCCCCCEEEEEE
Q psy8139 457 RALHDTT-ALEDEKVEFTVQVEGIP----TPKVSWYKDGFEIFSSRR-QRIVTDN----DISTLIIHQAALMDEGEIKCT 526 (1101)
Q Consensus 457 ~~p~~~~-v~~g~~v~L~C~~~g~p----~~~v~W~~~g~~~~~~~~-~~~~~~~----~~~~l~I~~l~~~d~g~Y~C~ 526 (1101)
..|.... +..|++++|.|.+.|.| .+.|.|++++..+..... ......+ ..+.|.|.++...|+|.|+|.
T Consensus 7 ~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 86 (207)
T 2vol_A 7 FPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCR 86 (207)
T ss_dssp ECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEE
T ss_pred eCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEE
Confidence 3444334 78999999999999874 248999999976542110 0000011 124799999999999999999
Q ss_pred EEeCCCceEEEEEE----eeccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCeecCCCCceEEE-e
Q psy8139 527 ATNRAGHSITKARL----RLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGEPLTSGGRYEIT-H 599 (1101)
Q Consensus 527 a~n~~g~~~~s~~l----~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~~l~~~~~~~~~-~ 599 (1101)
|.|..|.......+ .+..+|.+...+.... ...|+.+.|.|.+.|. |. +.+.|+++|..+......... .
T Consensus 87 a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~---~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 163 (207)
T 2vol_A 87 VNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKE---QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMD 163 (207)
T ss_dssp EECTTCSSCEEEEECCCCCCCBCCEEEEECCCTG---GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEEC
T ss_pred EEccCCCCceEEEeccCCCCCcCCeEEEeCCCHH---HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceEC
Confidence 99988864332233 4455666543322211 1248899999999984 54 499999999987542211111 1
Q ss_pred ecc----eEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 600 TDR----YLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 600 ~~~----~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
.++ .+.|.|......+.|.|+|.|.|....
T Consensus 164 ~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 164 TDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp TTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred CCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 111 223555555556789999999998654
No 318
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.31 E-value=2.8e-12 Score=116.16 Aligned_cols=95 Identities=26% Similarity=0.450 Sum_probs=72.9
Q ss_pred CCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceee---cccccCccEEEEcCCCCCceEEEE
Q psy8139 685 GPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRA---SPHMVEDTELMVSGLEPGWRYQFR 761 (1101)
Q Consensus 685 ~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~---~~~~~~~~~~~i~~L~p~t~Y~~~ 761 (1101)
++|++|..+ .....+.+ +.|+|++|..++|.+|.+|.|+|+..+...|... .......++++|.+|.|++.|.|+
T Consensus 5 ~~P~~P~~~-~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~r 82 (105)
T 2haz_A 5 DTPSSPSID-QVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 82 (105)
T ss_dssp CCCCCCEEE-EEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEE
T ss_pred CCCcCCCCC-EEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEE
Confidence 455554332 22345556 9999999988888889999999999887777421 111135689999999999999999
Q ss_pred EEEEcCCccCCCCCCCCcEE
Q psy8139 762 ITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 762 V~A~n~~G~g~~S~~s~~~t 781 (1101)
|.|.|..|.|++|....+.|
T Consensus 83 V~A~n~~G~g~~S~~~~~~T 102 (105)
T 2haz_A 83 LAALNGKGLGEISAASEFKT 102 (105)
T ss_dssp EEEEETTEECCCCCCEEEEC
T ss_pred EEEEcCCccCCCcCCEeeEE
Confidence 99999999999987766554
No 319
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.31 E-value=5.7e-11 Score=120.14 Aligned_cols=124 Identities=18% Similarity=0.257 Sum_probs=99.9
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccC-CCeE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIP-TPKV 484 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p-~~~v 484 (1101)
..|.|. ...|.|.|+|.|.|.. +..+.+.+. .+|.+...+....+..|++++|.|.+.|.| .+.+
T Consensus 51 ~~l~i~--~~~d~G~Y~C~~~n~~--------~~~~~l~V~----~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i 116 (184)
T 3b5h_A 51 TEFKVD--SDDQWGEYSCVFLPEP--------MGTANIQLH----GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDW 116 (184)
T ss_dssp EEEEEC--GGGCCEEEEEEEESTT--------SCEEEEEEC----CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEE
T ss_pred EEEEEe--chhhCeEEEEEEECCc--------CcEEEEEEe----cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeE
Confidence 456666 6899999999999821 133455553 567777778888899999999999999999 7999
Q ss_pred EEEE---CCE-Eeec--CCcEEEEecCCeeEEEEeecC-CCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 485 SWYK---DGF-EIFS--SRRQRIVTDNDISTLIIHQAA-LMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 485 ~W~~---~g~-~~~~--~~~~~~~~~~~~~~l~I~~l~-~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
.|++ ++. .+.. ..++.+...++.+.|.|.++. ..|.|.|+|.|.|..|.....+.|.|.
T Consensus 117 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 117 AWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 9999 444 4432 256777777777899999999 999999999999999998888888775
No 320
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.31 E-value=1.7e-11 Score=127.93 Aligned_cols=132 Identities=11% Similarity=0.170 Sum_probs=102.1
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccC-----------CCCCCeeeecCceeEEccCCeEEE
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS-----------PAAAPSFIRALHDTTALEDEKVEF 472 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~-----------~~~~P~~~~~p~~~~v~~g~~v~L 472 (1101)
....|.|.+++..|.|.|+|.|.|..|... +..+.+.+... +..+|.+...|....+..|+.++|
T Consensus 63 ~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~----s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L 138 (218)
T 3k0w_A 63 NTSELIFNAVHVKDAGFYVCRVNNNFTFEF----SQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVL 138 (218)
T ss_dssp CSSEEEETTCCGGGCEEEEEEEECTTCCEE----CCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEE
T ss_pred CCCEEEEccCChhhCeEeEEEEEcCCCCce----eeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEE
Confidence 346899999999999999999999876432 23345554432 123477888888899999999999
Q ss_pred EEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCce-EEEEEEeeccCCcc
Q psy8139 473 TVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHS-ITKARLRLEAPPTI 548 (1101)
Q Consensus 473 ~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~-~~s~~l~V~~~p~~ 548 (1101)
.|.+.|.|.+.+.|++++..+.... ...|.|.++...|+|.|+|.|.|..|.. +..+.|.|...+.+
T Consensus 139 ~C~~~g~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~~ 206 (218)
T 3k0w_A 139 QCVAVGSPIPHYQWFKNELPLTHET---------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNL 206 (218)
T ss_dssp ECEEEBSSCCEEEEEETTEECTTCC---------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC----
T ss_pred EEEecccCCCeEEEEECCEECCCCC---------CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCccC
Confidence 9999999999999999998876432 2389999999999999999999988874 34567777664433
No 321
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.31 E-value=3.3e-11 Score=122.71 Aligned_cols=129 Identities=26% Similarity=0.409 Sum_probs=101.3
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
...|.|.+++..|.|.|+|.+.|..|... ..+.+.+. .+|.+... ....+..|+.+.|.|.+.|.|.+.+
T Consensus 57 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~-----~~~~l~V~----~~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v 126 (192)
T 2va4_A 57 NTELTVRNIINSDGGPYVCRATNKAGEDE-----KQAFLQVF----VQPHIIQL-KNETTYENGQVTLVCDAEGEPIPEI 126 (192)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEETTEEEE-----EEEEEEEE----EEEEEEEE-CCEEECTTSEEEEEEEEEEESCCEE
T ss_pred eeEEEEecCChhcCcEEEEEEEccccccc-----eEEEEEEE----ccCccccc-CcceEEeCCeEEEEEEecCCCCCcE
Confidence 45799999999999999999999877543 22334432 34554433 3456778999999999999999999
Q ss_pred EEEEC--CEEeec-----CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 485 SWYKD--GFEIFS-----SRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 485 ~W~~~--g~~~~~-----~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
.|+++ +..+.. ..++.+........|.|.++...|.|.|+|.|.|..|....++.|.|.
T Consensus 127 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 127 TWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 99998 666543 345566556667799999999999999999999999998888877763
No 322
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.31 E-value=4.2e-11 Score=122.58 Aligned_cols=123 Identities=11% Similarity=0.178 Sum_probs=91.8
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
....|.|.++++.|+|.|+|.|.|..|.+.. +..+.+.+... ..+|.+...|.. .+..|++++|.|.+.+. .+.
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~---s~~~~l~V~~~-~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~ 129 (196)
T 3p2t_A 56 NKARFSIPSMTEDYAGRYRCYYRSPVGWSQP---SDPLELVMTGA-YSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDT 129 (196)
T ss_dssp SEEEEEESSCCGGGCEEEEEEEEETTEEBCC---CCCEEEEEECS-SCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEE
T ss_pred ceEEEEeccCCcccCceEEEEEeCCCcccCC---CccEEEEecCC-CCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCE
Confidence 4578999999999999999999998873322 34566665432 346666666554 67899999999999885 458
Q ss_pred EEEEECCEEeecCCcE-EEEecCCeeEEEEeecCCCCCEEEEEEEEeCCC
Q psy8139 484 VSWYKDGFEIFSSRRQ-RIVTDNDISTLIIHQAALMDEGEIKCTATNRAG 532 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~-~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g 532 (1101)
+.|+++|..+...... ..........|.|.++...|+|.|+|.|.|..+
T Consensus 130 ~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 130 FLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred EEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 9999999766443221 111222345899999999999999999999876
No 323
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.31 E-value=1.9e-11 Score=130.16 Aligned_cols=175 Identities=17% Similarity=0.203 Sum_probs=114.0
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEEC--CEE---e-----------ecCCcEEEEe-cCCeeEEEEeecCC
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GFE---I-----------FSSRRQRIVT-DNDISTLIIHQAAL 517 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~---~-----------~~~~~~~~~~-~~~~~~l~I~~l~~ 517 (1101)
+...|..+.+..|++++|.|.+.+.|.+.+.|++. +.. + ....++.+.. ..+..+|.|.++..
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 34567788899999999999999999999999982 110 0 0113444433 24566899999999
Q ss_pred CCCEEEEEEEEeCCC------ceEEEEEEeecc------CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEE
Q psy8139 518 MDEGEIKCTATNRAG------HSITKARLRLEA------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWL 583 (1101)
Q Consensus 518 ~d~g~Y~C~a~n~~g------~~~~s~~l~V~~------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~ 583 (1101)
.|+|.|.|.+.|..| .......|.|.. +|.+...+. ....+..|..+.|.|.+.|. |.+ .+.|+
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~--~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~ 161 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEP--SEAEISHTQKATLVCLATGFFPDHVELSWW 161 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEEC--CHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecC--CcccccCCCceEEEEEEccCcCCCEEEEEE
Confidence 999999999999433 112234666665 332211100 00112348999999999985 434 78999
Q ss_pred ECCeecCCCCceEEEe-------ecc----eEEEEEccCCCCC-CeEEEEEEEeCCCCce
Q psy8139 584 HNGEPLTSGGRYEITH-------TDR----YLNLRISDARRAD-RGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 584 ~~g~~l~~~~~~~~~~-------~~~----~~sl~i~~l~~~~-~y~y~c~A~N~~G~~~ 631 (1101)
++|..+..+....... .++ ...|.|......+ .+.|+|.|.|..+...
T Consensus 162 k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp ETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 9999886532111000 011 2467777776666 6799999999866543
No 324
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.31 E-value=6.5e-12 Score=114.04 Aligned_cols=87 Identities=24% Similarity=0.387 Sum_probs=70.3
Q ss_pred CCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEE
Q psy8139 686 PPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAE 765 (1101)
Q Consensus 686 ~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 765 (1101)
+|++|...... .+.+++.|+|.++ .+||.+|++|.|+|+..++..|......++..++++|.+|.|++.|+|+|.|.
T Consensus 8 ~P~pP~~~~~~--~~~~sv~L~W~p~-~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 8 EPSPPSIHGQP--SSGKSFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp CCCSCCEECCB--CSTTCEEEEECCC-CCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEE
T ss_pred CccCCcccccc--cCCCEEEEEEECC-CCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEE
Confidence 45555433222 6899999999965 68999999999999998777776554444677899999999999999999999
Q ss_pred cCCccCCCCC
Q psy8139 766 NVVGFSEPGP 775 (1101)
Q Consensus 766 n~~G~g~~S~ 775 (1101)
|..|.|.+|.
T Consensus 85 N~~G~s~pS~ 94 (114)
T 2kbg_A 85 NRLGYSEPTV 94 (114)
T ss_dssp CTTSCEEEEE
T ss_pred eCCcCcCCcC
Confidence 9999988764
No 325
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.31 E-value=4.7e-12 Score=131.31 Aligned_cols=180 Identities=16% Similarity=0.218 Sum_probs=115.0
Q ss_pred CCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEEEec
Q psy8139 349 GKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENV 428 (1101)
Q Consensus 349 ~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~ 428 (1101)
+....|.|. ..+.....+.|... +..+..|.......... ...........|.|.+++..|.|.|+|.|.|.
T Consensus 16 G~~v~L~C~-~~~~p~~~v~W~~~----~~~~~~~~~~~~~~~~~---~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 87 (212)
T 1f97_A 16 NESIKLTCT-YSGFSSPRVEWKFV----QGSTTALVCYNSQITAP---YADRVTFSSSGITFSSVTRKDNGEYTCMVSEE 87 (212)
T ss_dssp TCCEEEECE-EESCSSEEEEEEEE----ETTEEEEEEETTEECGG---GTTTEEEETTEEEESCCCGGGCEEEEEEEEET
T ss_pred CCCEEEEeE-eCCCCCcEEEEEEC----CCceeeEEecCCccccc---ccCcEEeeceeEEEcccCcccCeEEEEEEEcc
Confidence 455566665 33445667888764 22343333221110000 00001122378999999999999999999998
Q ss_pred CCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEE-EeccCCCeEEEEECCE-EeecCCcE-------
Q psy8139 429 VGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQ-VEGIPTPKVSWYKDGF-EIFSSRRQ------- 499 (1101)
Q Consensus 429 ~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~-~~g~p~~~v~W~~~g~-~~~~~~~~------- 499 (1101)
.|... .+..+.+.+. .+|.+...+....+..|++++|.|. +.+.|.+.+.|++++. .+......
T Consensus 88 ~g~~~---~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~ 160 (212)
T 1f97_A 88 GGQNY---GEVSIHLTVL----VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNS 160 (212)
T ss_dssp TSSSE---EEEEEEEEEE----BCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSS
T ss_pred CCCcc---cEEEEEEEEE----cCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCc
Confidence 77221 1233445544 3444444445567889999999999 7999999999999998 66543221
Q ss_pred EEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE--EEEEeec
Q psy8139 500 RIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT--KARLRLE 543 (1101)
Q Consensus 500 ~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~--s~~l~V~ 543 (1101)
..........|.|.++...|+|.|+|.|.|..|.... ...|.|.
T Consensus 161 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 161 SFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp CEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred eeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 1122233458999999999999999999999998833 4555554
No 326
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.31 E-value=2.8e-11 Score=124.45 Aligned_cols=142 Identities=15% Similarity=0.137 Sum_probs=98.7
Q ss_pred EEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEe-cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccc
Q psy8139 596 EITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVT-DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIG 674 (1101)
Q Consensus 596 ~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~-~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~ 674 (1101)
.+...+....+.|.+|.+++.|.|++.|.|..|.+..+ .+.+. ..+.+|.....
T Consensus 48 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~-~~~~~t~~~~~~~~~~~------------------------ 102 (201)
T 2ha1_A 48 EATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT-RFDFTTTSTSTPVTSNT------------------------ 102 (201)
T ss_dssp EEEECTTCCEEEECSCCTTEEEEEEEEEECTTSCEEEE-EEEEEECCCCCTTCSCC------------------------
T ss_pred EEecCCCccEEEecCCCCCCEEEEEEEEEecccccCce-eEEEecCCCCCCccccc------------------------
Confidence 33344556789999999999999999999999987654 33333 22233321100
Q ss_pred eeEEEEEcCCCCCCC-Ccc---cCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEc
Q psy8139 675 NYIVEYFRPPGPPGK-PQL---LPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVS 750 (1101)
Q Consensus 675 ~Y~v~~~~~~~~p~~-p~~---~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~ 750 (1101)
..+.|.+ |+. ......++.+++.|+|.+|. ++|.+|.|.|+..+...|........+.++++|.
T Consensus 103 --------~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~v~~~~~~~~i~ 170 (201)
T 2ha1_A 103 --------VTGETTPFSPLVATSESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP 170 (201)
T ss_dssp --------CCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSC----TTEEEEEEEEEETTTCCCCEEEEEETTCCEEEEC
T ss_pred --------ccCCCCCCCCccCCceEEEecCCCeEEEEEeCCC----CCccEEEEEEEECCCCCceeEEEcCCceeEEEeC
Confidence 0011111 111 22344678899999999882 4799999999986554554433334677999999
Q ss_pred CCCCCceEEEEEEEEcCCccCCCC
Q psy8139 751 GLEPGWRYQFRITAENVVGFSEPG 774 (1101)
Q Consensus 751 ~L~p~t~Y~~~V~A~n~~G~g~~S 774 (1101)
+|.|++.|.|+|.|.|..|.|.+.
T Consensus 171 ~L~p~t~Y~~~V~A~~~~G~~~~~ 194 (201)
T 2ha1_A 171 DLLPGRKYIVNVYQISEDGEQSLI 194 (201)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEE
T ss_pred CCCCCCEEEEEEEEEcCCCCcccE
Confidence 999999999999999999997653
No 327
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.31 E-value=1.6e-11 Score=132.73 Aligned_cols=176 Identities=17% Similarity=0.191 Sum_probs=114.8
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEE--CCE------------EeecC----CcEEEEe-cCCeeEEEE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYK--DGF------------EIFSS----RRQRIVT-DNDISTLII 512 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~--~g~------------~~~~~----~~~~~~~-~~~~~~l~I 512 (1101)
.+.+...|..+.+..|++++|.|.+. .+.+.+.|++ .+. ..... .++.+.. ..+..+|.|
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 34456667788999999999999987 5778999998 221 11111 4555554 234568999
Q ss_pred eecCCCCCEEEEEEEEeC--CCceEEEEEEeecc------CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCC--eeEE
Q psy8139 513 HQAALMDEGEIKCTATNR--AGHSITKARLRLEA------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPP--TARW 582 (1101)
Q Consensus 513 ~~l~~~d~g~Y~C~a~n~--~g~~~~s~~l~V~~------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~--~v~W 582 (1101)
.+++..|+|.|.|.+.|. .+.......|.|.. +|.+...+ +....+..|..++|.|.+.|.+++ .+.|
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~--~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 182 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFE--PSEAEISHTQKATLVCLATGFYPDHVELSW 182 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEEC--CCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeC--CCcccccCCCceEEEEEECcccCCCeEEEE
Confidence 999999999999999984 22233345666665 23221110 011123358999999999986554 8999
Q ss_pred EECCeecCCCCceEEE--------eec---ceEEEEEccCCCCC-CeEEEEEEEeCCCCc
Q psy8139 583 LHNGEPLTSGGRYEIT--------HTD---RYLNLRISDARRAD-RGEYQAHGVNSLGED 630 (1101)
Q Consensus 583 ~~~g~~l~~~~~~~~~--------~~~---~~~sl~i~~l~~~~-~y~y~c~A~N~~G~~ 630 (1101)
+++|..+..+...... ..+ ..+.+.|......| .|.|+|.|.|.....
T Consensus 183 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 183 WVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp EESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred EECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 9999887643211100 000 02456777766666 999999999986654
No 328
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.30 E-value=1.5e-11 Score=126.30 Aligned_cols=134 Identities=20% Similarity=0.247 Sum_probs=103.1
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEecc---CCCCCCeeeecCceeEEccCCeEEEEEEEeccC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR---SPAAAPSFIRALHDTTALEDEKVEFTVQVEGIP 480 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~---~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p 480 (1101)
.+.+|.|.+++..|.|.|+|.+.|..+..... +..+.+.+.. ....+|.+...+....+..|+.++|.|.+.|.|
T Consensus 64 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p 141 (201)
T 3s97_C 64 TNGNLYIANVEASDKGNYSCFVSSPSITKSVF--SKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNP 141 (201)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEEEGGGTEEEE--CCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEES
T ss_pred CCCeEEECcCCcccCeEEEEEEEecCCCcchh--hcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCC
Confidence 34679999999999999999999977654321 2223333321 122456666666688899999999999999999
Q ss_pred CCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 481 TPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 481 ~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
.+.+.|++++..+... ......+ ..|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 142 ~p~v~W~~~~~~~~~~--~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 142 VPDIRWRKVLEPMPST--AEISTSG--AVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CCEEEEEETTBCCCTT--CEEETTT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCceEEEeCCCcCCCc--eeecCCC--CEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 9999999999866543 2222233 389999999999999999999999999888888775
No 329
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.30 E-value=3.2e-11 Score=127.93 Aligned_cols=174 Identities=17% Similarity=0.211 Sum_probs=114.6
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEE--------------CCEEeec---CCcEEEEe-cCCeeEEEEeecC
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYK--------------DGFEIFS---SRRQRIVT-DNDISTLIIHQAA 516 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~--------------~g~~~~~---~~~~~~~~-~~~~~~l~I~~l~ 516 (1101)
+...|..+.+.+|++++|.|.+.+ +.+.+.|++ ++..... ..++.+.. ..+..+|.|.++.
T Consensus 5 v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 83 (240)
T 3q5y_A 5 VVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALE 83 (240)
T ss_dssp CEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCC
T ss_pred cccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCC
Confidence 455677889999999999999876 778999998 2221111 24555544 3345689999999
Q ss_pred CCCCEEEEEEEEeCCC---ceEEEEEEeecc------CCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEEEC
Q psy8139 517 LMDEGEIKCTATNRAG---HSITKARLRLEA------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWLHN 585 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g---~~~~s~~l~V~~------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~~ 585 (1101)
..|+|.|.|.+.+..+ .......|.|.. +|.+...+ +....+..|..+.|.|.+.| .|.+ .+.|+++
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~--~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 161 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFE--PSKAEIANKQKATLVCLARGFFPDHVELSWWVN 161 (240)
T ss_dssp GGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEEC--CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeC--CchhhcccCCceEEEEEEeeEECCCeEEEEEEC
Confidence 9999999999984322 122234566653 23222100 01112335889999999998 5655 7999999
Q ss_pred CeecCCCCceE---EEeecc----eEEEEEccCCCCC-CeEEEEEEEeCCCCce
Q psy8139 586 GEPLTSGGRYE---ITHTDR----YLNLRISDARRAD-RGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 586 g~~l~~~~~~~---~~~~~~----~~sl~i~~l~~~~-~y~y~c~A~N~~G~~~ 631 (1101)
|..+..+.... ....++ .+.|.|......| .|.|+|.|.|......
T Consensus 162 g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~~ 215 (240)
T 3q5y_A 162 GKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSEE 215 (240)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred CEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCc
Confidence 99886532211 111111 2358888887777 6799999999866543
No 330
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.30 E-value=6e-11 Score=125.05 Aligned_cols=177 Identities=14% Similarity=0.109 Sum_probs=112.9
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E---Eee-------------cCCcEEEEec--CCeeEEEEeecC
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F---EIF-------------SSRRQRIVTD--NDISTLIIHQAA 516 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~---~~~-------------~~~~~~~~~~--~~~~~l~I~~l~ 516 (1101)
|..+.+..|++++|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+ ++..+|+|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 4456789999999999998765 5789999842 1 110 1245665542 345689999999
Q ss_pred CCCCEEEEEEEEeCC--Cc----eEEEEEEeeccC----Ccccc-CCCCCCCeEEeeC-CEEEEEEEEeec-CCC-eeEE
Q psy8139 517 LMDEGEIKCTATNRA--GH----SITKARLRLEAP----PTIRL-PKQYEDGLLFEMG-EIIKLKVSMAGM-PPP-TARW 582 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~--g~----~~~s~~l~V~~~----p~~~~-~~~~~~~~~v~~g-~~~~l~c~~~g~-p~~-~v~W 582 (1101)
.+|+|.|.|.+.+.. +. ....+.|.|... |.+.. .+. ..+..| +.+.|.|.+.+. |.+ .+.|
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~----~~~~~g~~~v~L~C~~~g~~P~p~~v~W 162 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSC----ENSPSDTSSVAVGCLAQDFLPDSITFSW 162 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC----------CCSEEEEEEEEEEBSSCCEEEE
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccc----cccCCCCCcEEEEEEEEEEeCCCeEEEE
Confidence 999999999998422 21 112357777652 32221 111 123467 889999999986 765 9999
Q ss_pred EE-CCeecCCCCce-EEEeec---ceEEEEEccCCC--CCCeEEEEEEEeCCCCceeEEEEEEe
Q psy8139 583 LH-NGEPLTSGGRY-EITHTD---RYLNLRISDARR--ADRGEYQAHGVNSLGEDVASFLVTVT 639 (1101)
Q Consensus 583 ~~-~g~~l~~~~~~-~~~~~~---~~~sl~i~~l~~--~~~y~y~c~A~N~~G~~~~s~~l~v~ 639 (1101)
++ +|..+.....+ .....+ ..+.|.|..... .+.|.|+|.|.|..|.......+.+.
T Consensus 163 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 163 KYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp EETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred EcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 99 88776530000 000011 135678888776 67899999999999876655554443
No 331
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.29 E-value=1.3e-11 Score=128.54 Aligned_cols=174 Identities=11% Similarity=0.088 Sum_probs=107.3
Q ss_pred cCceeEEccCCeEEEEEEEecc--CCCeEEEEECC--E--E-e-------------ecCCcEEEEecCCeeEEEEeecCC
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGI--PTPKVSWYKDG--F--E-I-------------FSSRRQRIVTDNDISTLIIHQAAL 517 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~--p~~~v~W~~~g--~--~-~-------------~~~~~~~~~~~~~~~~l~I~~l~~ 517 (1101)
.|..+.+.+|++++|.|.+.+. +.+.+.|++.. . . + ....++.+...++..+|.|.++..
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 4556789999999999999863 36689998731 1 1 1 013456666566677899999999
Q ss_pred CCCEEEEEEEEeCCCc----eEEEEEEeec----cCCccc-cCCCCCCCeEEeeCCEEEEEEEEeecC--CCeeEEEECC
Q psy8139 518 MDEGEIKCTATNRAGH----SITKARLRLE----APPTIR-LPKQYEDGLLFEMGEIIKLKVSMAGMP--PPTARWLHNG 586 (1101)
Q Consensus 518 ~d~g~Y~C~a~n~~g~----~~~s~~l~V~----~~p~~~-~~~~~~~~~~v~~g~~~~l~c~~~g~p--~~~v~W~~~g 586 (1101)
+|+|.|.|.+.|..+. ......|.|. .+|.+. .++.. .+..|+.+.|.|.+.+.+ .+.+.|.++|
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~----~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g 160 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCC----GDTPSSTVTLGCLVKGYLPEPVTVTWNSGT 160 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCT----TCCC--CEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCc----cccCCCcEEEEEEEeeeeCCCeEEEEeeCC
Confidence 9999999999988653 2223567775 334433 12211 234689999999999864 3467899988
Q ss_pred eecCCCCceEEEeecce-EEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 587 EPLTSGGRYEITHTDRY-LNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 587 ~~l~~~~~~~~~~~~~~-~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
..+...........++. .......+.+.+ |.|+|.|.|..|.......+
T Consensus 161 ~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 161 LTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp BCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred EECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 75532111111111111 111113355566 99999999998875544433
No 332
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.29 E-value=1.9e-11 Score=128.60 Aligned_cols=139 Identities=17% Similarity=0.268 Sum_probs=105.2
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeee-cCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIR-ALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~-~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
...|.|.+++..|.|.|+|.|.|..|... ..+.+.+...+..+|.+.. .+....+..|+.+.|.|.+.+.|.+.
T Consensus 75 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~-----~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~ 149 (231)
T 3ojm_B 75 HWSLIMESVVPSDKGNYTCVVENEYGSIN-----HTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPH 149 (231)
T ss_dssp GTEEEECSCCGGGCEEEEEEEEETTEEEE-----EEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCE
T ss_pred cceEEEecCCcccCEEEEEEEecccCccc-----ccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCE
Confidence 35799999999999999999999877542 2345555544444555443 36778899999999999999999999
Q ss_pred EEEEE----CCEEeecCCc--EEEEe-----cCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCcc
Q psy8139 484 VSWYK----DGFEIFSSRR--QRIVT-----DNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTI 548 (1101)
Q Consensus 484 v~W~~----~g~~~~~~~~--~~~~~-----~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~ 548 (1101)
+.|++ +|..+..... ..... ......|.|.++...|+|.|+|.|.|..|....++.|.|..+|..
T Consensus 150 v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 150 IQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp EEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred EEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 99999 7766543321 11111 112347999999999999999999999999988999999887754
No 333
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.29 E-value=7.5e-12 Score=115.04 Aligned_cols=85 Identities=19% Similarity=0.248 Sum_probs=70.5
Q ss_pred CCCCCCceEEEEeeCCCCCC---CCC-cceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccC
Q psy8139 696 SPSLDRDVFTIRWEPPEYDG---GSP-VLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFS 771 (1101)
Q Consensus 696 ~~~~~~~si~l~W~pP~~~~---~~~-i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 771 (1101)
..+++.++++|+|++|..++ +.+ |++|.|+........|..+.. ...+.++|.+|.|++.|.|||+|.|..|.|
T Consensus 24 v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~--~~~t~~~v~gL~p~t~Y~frV~A~n~~G~s 101 (120)
T 1wfu_A 24 VGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYT--GYATRHVVEGLEPRTLYKFRLKVTSPSGEY 101 (120)
T ss_dssp CCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEE--ESCSEEEEESCCTTCEEEEEEEEECSSSCE
T ss_pred eceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEec--CCccEEEECCCCCCCEEEEEEEEECCCCCC
Confidence 44789999999999998776 666 999999955445678887765 556789999999999999999999999999
Q ss_pred CCCCCCCcEEe
Q psy8139 772 EPGPLSEPLTV 782 (1101)
Q Consensus 772 ~~S~~s~~~t~ 782 (1101)
++|+...+.|.
T Consensus 102 ~~S~~~~~~T~ 112 (120)
T 1wfu_A 102 EYSPVVSVATT 112 (120)
T ss_dssp EECCCEEEECC
T ss_pred CCCccEeeEcC
Confidence 98876555444
No 334
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.29 E-value=2.1e-11 Score=130.20 Aligned_cols=127 Identities=13% Similarity=0.190 Sum_probs=91.4
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCee-eecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSF-IRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~-~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
..+|.|.++++.|+|.|+|.|.|..+.......+..+.+.+...+ .+|.+ ...+..+.+.+|+++.|.|.+.+.|.|.
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~ 167 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT-PSNNVHVSTAEVVQVDEGNDITMTCPCTDCANAN 167 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS-CCSCCEECCCSEEECCTTCCEEECCCEESCTTCE
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC-CCCeEEEecCceEEecCCCcEEEEEEecCCCCCe
Confidence 357999999999999999999998775433211234556554332 23333 3445677788999999999999999999
Q ss_pred EEEEECCEEeecCCcE----------------------EEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 484 VSWYKDGFEIFSSRRQ----------------------RIVTDNDISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~----------------------~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
+.|++++..+...... ..... +...|.|.++...|+|.|+|.|.|..|.
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 168 VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GARNLVIRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-CccEEEEecCCcccCEEEEEEecCCccc
Confidence 9999998766432100 00000 1248999999999999999999996664
No 335
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.29 E-value=6.1e-12 Score=116.87 Aligned_cols=93 Identities=22% Similarity=0.327 Sum_probs=70.5
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
..|.+|.++.+...+.+++.|+|.+|. +++++|
T Consensus 16 ~~P~~P~~~~~~~~~~~sv~l~W~~p~-----------------------------------------------~~~~~i 48 (118)
T 1x3d_A 16 CEPDIPNPPRIANRTKNSLTLQWKAPS-----------------------------------------------DNGSKI 48 (118)
T ss_dssp SCCCCCCCCEEEEEETTEEEEECCCCC-----------------------------------------------CCSSCE
T ss_pred CCCcCCCCcEEeccCCCEEEEEECCCC-----------------------------------------------CCCCcc
Confidence 467777788777777777777777654 233457
Q ss_pred ceEEEEEEeCCC-CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 720 LGYLVEHRRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 720 ~~Y~V~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
++|.|+|+.... ..|..+.. ...++++|.+|.|++.|.|+|.|.|..|.|++|....+.|
T Consensus 49 ~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T 109 (118)
T 1x3d_A 49 QNFVLEWDEGKGNGEFCQCYM--GSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 109 (118)
T ss_dssp EEEEEEECTTTSSSCCEEEEE--ESCSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEEC
T ss_pred eEEEEEEecCCCCCCeEEeec--cCCcEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEc
Confidence 777777776554 46766544 4568999999999999999999999999999887665543
No 336
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.28 E-value=3.1e-11 Score=129.50 Aligned_cols=193 Identities=12% Similarity=0.133 Sum_probs=114.2
Q ss_pred cCceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E-E--ee--------------cCCcEEEEec--CCeeEEEEee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F-E--IF--------------SSRRQRIVTD--NDISTLIIHQ 514 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~-~--~~--------------~~~~~~~~~~--~~~~~l~I~~ 514 (1101)
.|..+.+..|++++|.|.+.+.| .+.+.|+++. . . +. ...++.+..+ .+..+|.|.+
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 35677899999999999999876 6789999852 1 1 10 1245555442 3456899999
Q ss_pred cCCCCCEEEEEEEEeCCCce---EEEEEEeecc----CCcccc-CCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEEE
Q psy8139 515 AALMDEGEIKCTATNRAGHS---ITKARLRLEA----PPTIRL-PKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWLH 584 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g~~---~~s~~l~V~~----~p~~~~-~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~~ 584 (1101)
+...|+|.|.|.+.|..+.. ...+.|.|.. +|.+.. ++. ..+..|+.++|.|.+.+. |.+ .|.|++
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~----~~v~~g~~v~L~C~~~g~~P~~i~v~W~k 167 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPV----CGDTTGSSVTLGCLVKGYFPEPVTLTWNS 167 (261)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC----CC--CCSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred CCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCC----ccccCCCcEEEEEEEEeEeCCCCEEEEec
Confidence 99999999999999865321 1235677764 233322 211 124569999999999985 665 999999
Q ss_pred CCeecCCCCceEEEeec---ceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCCCCccEEEEecCCeEEEE
Q psy8139 585 NGEPLTSGGRYEITHTD---RYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLPPGKAKVVMTLGKSVTLS 661 (1101)
Q Consensus 585 ~g~~l~~~~~~~~~~~~---~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~sv~ls 661 (1101)
++..+.......+...+ ..+.|.|......+ |.|+|.|.|...... +.+.-.|..| ...+.+.
T Consensus 168 ~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~----~~~~~~~~~~---------~~~~~~~ 233 (261)
T 2xqy_G 168 GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK----VDKKIEPRAS---------DDDDKAG 233 (261)
T ss_dssp GTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE----EEEECCCC------------------
T ss_pred CCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCcc----EEEEeccccC---------CCCcccC
Confidence 88765311000010111 14578888888777 999999999665422 2222122222 4456677
Q ss_pred eecCCCC
Q psy8139 662 WSEPEDD 668 (1101)
Q Consensus 662 W~~p~~~ 668 (1101)
|..|...
T Consensus 234 ~~~~~~~ 240 (261)
T 2xqy_G 234 WSHPQFE 240 (261)
T ss_dssp -------
T ss_pred CCCcchh
Confidence 8776543
No 337
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=4.1e-12 Score=119.29 Aligned_cols=115 Identities=25% Similarity=0.398 Sum_probs=86.9
Q ss_pred EEEEEeCCCCceeEEEEEEe---cCCC-CCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCC
Q psy8139 620 QAHGVNSLGEDVASFLVTVT---DRPL-PPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPD 695 (1101)
Q Consensus 620 ~c~A~N~~G~~~~s~~l~v~---~~P~-~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~ 695 (1101)
+|.|.|..|.+..+..+.+. +.|. +|.++.+...+.+++.|+|++|..+
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~--------------------------- 55 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSG--------------------------- 55 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTT---------------------------
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCc---------------------------
Confidence 57788999987766555554 3344 6778888888888888888876431
Q ss_pred CCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCC
Q psy8139 696 SPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGP 775 (1101)
Q Consensus 696 ~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 775 (1101)
..+++|.+|.|+|+..+...|..... ...++++|.+|.|++.|.|+|.|.|..|.|++|.
T Consensus 56 ------------------~~~g~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 115 (124)
T 2ed9_A 56 ------------------TQNGFITGYKIRHRKTTRRGEMETLE--PNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSN 115 (124)
T ss_dssp ------------------TCCSCCCEEEEEEEESSSSCCEEEEC--SSCSEEEEECCCSSCEEEECEEEECSSCBCCCCC
T ss_pred ------------------CCCcEEeEEEEEEEECCCCcceEEec--CCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCC
Confidence 13456889999998887766655432 6788999999999999999999999999998876
Q ss_pred CCCcEE
Q psy8139 776 LSEPLT 781 (1101)
Q Consensus 776 ~s~~~t 781 (1101)
...+.|
T Consensus 116 ~~~~~T 121 (124)
T 2ed9_A 116 WYTAET 121 (124)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 655443
No 338
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=9.6e-12 Score=115.93 Aligned_cols=96 Identities=21% Similarity=0.262 Sum_probs=73.1
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
.+|++|.++.+...+.+++.|+|++|. .+.+++|
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~----------------------------------------------~~~~g~i 49 (120)
T 1x5f_A 16 PLPSAPRDVVASLVSTRFIKLTWRTPA----------------------------------------------SDPHGDN 49 (120)
T ss_dssp CCCCCCEEEEEEEECSSCEEEEEECCS----------------------------------------------SCSSCCS
T ss_pred CCCCCCCCcEEEecCCCEEEEEECCCC----------------------------------------------CCCCCcE
Confidence 567788888777777777777777654 1222368
Q ss_pred ceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 720 LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 720 ~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
.+|.|+|+..+...|..........+.++|.+|.|++.|.|+|.|.|..|.|++|....+.|
T Consensus 50 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 111 (120)
T 1x5f_A 50 LTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVET 111 (120)
T ss_dssp SEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEEC
T ss_pred EEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEe
Confidence 88888888887666665554446689999999999999999999999999988876554443
No 339
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=1.2e-11 Score=112.96 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=55.4
Q ss_pred ceEEEEeeCCCCCCCCCcceEEEEEEeCCC-CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcE
Q psy8139 702 DVFTIRWEPPEYDGGSPVLGYLVEHRRTGS-PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPL 780 (1101)
Q Consensus 702 ~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~ 780 (1101)
++++|+|.+|..+++.+|++|.|+|+..+. ..|..... ...++++|.+|.|++.|.|+|.|.|..|.|++|....+.
T Consensus 22 ~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~ 99 (109)
T 1x5x_A 22 TWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD--GEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFT 99 (109)
T ss_dssp SEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE--ESCSEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEE
T ss_pred CEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe--CCccEEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeE
Confidence 334444444434444467778887776654 35554443 457899999999999999999999999998887665554
Q ss_pred Ee
Q psy8139 781 TV 782 (1101)
Q Consensus 781 t~ 782 (1101)
|.
T Consensus 100 T~ 101 (109)
T 1x5x_A 100 TC 101 (109)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 340
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.28 E-value=1.1e-10 Score=120.99 Aligned_cols=132 Identities=18% Similarity=0.235 Sum_probs=92.0
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCCCceeE-EEEEEe--cCCCCCCccEEEEec----CCeEEEEeecCCCCCCcccceeE
Q psy8139 605 NLRISDARRADRGEYQAHGVNSLGEDVAS-FLVTVT--DRPLPPGKAKVVMTL----GKSVTLSWSEPEDDGGCKIGNYI 677 (1101)
Q Consensus 605 sl~i~~l~~~~~y~y~c~A~N~~G~~~~s-~~l~v~--~~P~~P~~~~~~~~~----~~sv~lsW~~p~~~~g~~i~~Y~ 677 (1101)
.+.+.+|.+...|.|++.|.|..|.+... ..+... .+|.||.++.+.... .+++.|+|++|...+
T Consensus 63 ~~~~~~l~~~~~Y~~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~-------- 134 (210)
T 3n06_B 63 HFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLID-------- 134 (210)
T ss_dssp EECGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCC--------
T ss_pred EeCCCCcccceeEEEEEEEEcCCCCeeCCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCcc--------
Confidence 34445788999999999999999976432 222221 357888887776543 356777777653211
Q ss_pred EEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCce
Q psy8139 678 VEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWR 757 (1101)
Q Consensus 678 v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 757 (1101)
..+|..+.+|.|.|+..++..|..... ...++++|.+|.|++.
T Consensus 135 -----------------------------------~~~g~~~~~Y~v~y~~~~~~~~~~~~~--~~~~~~~l~~L~p~t~ 177 (210)
T 3n06_B 135 -----------------------------------LKTGWFTLLYEIRLKPEKAAEWEIHFA--GQQTEFKILSLHPGQK 177 (210)
T ss_dssp -----------------------------------CTTSSCCEEEEEEEECTTCSSCEEEEE--ETCSEEEECCCCTTCE
T ss_pred -----------------------------------ccCCeEEEEEEEEEecCCCCCCEEEec--cCceEEEEeccCCCCE
Confidence 011224689999999887778876432 5678999999999999
Q ss_pred EEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 758 YQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 758 Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
|.|+|+|.|..|. +|+++..+...
T Consensus 178 Y~v~Vra~~~~g~--wS~wS~~~~~~ 201 (210)
T 3n06_B 178 YLVQVRCKPDHGY--WSAWSPATFIQ 201 (210)
T ss_dssp EEEEEEEEESSSC--CCCCCCCEEEE
T ss_pred EEEEEEEecCCCc--ccCCCCceeEE
Confidence 9999999998664 45555555443
No 341
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=113.78 Aligned_cols=95 Identities=24% Similarity=0.293 Sum_probs=72.9
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
.+|++|.++.+...+.+++.|+|.+|.+ ++++|
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~-----------------------------------------------~~~~i 48 (119)
T 2ed7_A 16 VLPSAPRDVVPVLVSSRFVRLSWRPPAE-----------------------------------------------AKGNI 48 (119)
T ss_dssp SSCCCCSCCEEEEECSSCEEEECCCCSC-----------------------------------------------CSSCE
T ss_pred CCCcCCcceEEEecCCCEEEEEEeCCCC-----------------------------------------------CCCcE
Confidence 4677777777777777777777776542 23468
Q ss_pred ceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 720 LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 720 ~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
.+|.|+|+..+...|..........+.++|.+|.|++.|.|+|.|.|..|.|++|....+.|
T Consensus 49 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 110 (119)
T 2ed7_A 49 QTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVAT 110 (119)
T ss_dssp EEEEEEEEESSCCCCEEEECCCTTCCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEEC
T ss_pred EEEEEEEEeCCCCcceeeEeecCCceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEe
Confidence 88999888877766665544446688999999999999999999999999988876655544
No 342
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.28 E-value=1.1e-10 Score=121.99 Aligned_cols=162 Identities=14% Similarity=0.203 Sum_probs=111.4
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E--E-e---e-------------cCCcEEEEec--CCeeEEEEe
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F--E-I---F-------------SSRRQRIVTD--NDISTLIIH 513 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~--~-~---~-------------~~~~~~~~~~--~~~~~l~I~ 513 (1101)
|..+.+.+|++++|.|.+.+.+ .+.+.|++.. . . + . ...++.+..+ .+..+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 4456789999999999998743 5789999732 1 1 1 0 1245555433 345689999
Q ss_pred ecCCCCCEEEEEEEEeCC--CceEEEEEEeecc----CCccc-cCCCCCCCeEEeeCCEEEEEEEEee-cCC--CeeEEE
Q psy8139 514 QAALMDEGEIKCTATNRA--GHSITKARLRLEA----PPTIR-LPKQYEDGLLFEMGEIIKLKVSMAG-MPP--PTARWL 583 (1101)
Q Consensus 514 ~l~~~d~g~Y~C~a~n~~--g~~~~s~~l~V~~----~p~~~-~~~~~~~~~~v~~g~~~~l~c~~~g-~p~--~~v~W~ 583 (1101)
++...|+|.|.|.+.+.. ........|.|.. +|.+. ..+. . . ..|..+.|.|.+.+ .|. +.+.|.
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~---~-~-~~g~~v~L~C~~~~~~P~~~~~v~W~ 161 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLC---S-T-QPDGNVVIACLVQGFFPQEPLSVTWS 161 (221)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECC---S-C-CCTTEEEEEEEEEEEBSSCSEEEEES
T ss_pred CCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCc---c-c-ccCCCEEEEEEEEeeECCCCEEEEEE
Confidence 999999999999999864 1222334566652 23222 1111 1 1 56899999999998 665 489999
Q ss_pred ECCeecC----------CCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 584 HNGEPLT----------SGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 584 ~~g~~l~----------~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
++|..+. .++.+.+ .+.|.|......+.|.|+|.|.|..|..
T Consensus 162 ~~g~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 162 ESGQGVTARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CCSTTCEEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred ECCEECceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 9887662 2222222 3468899988889999999999987654
No 343
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2.1e-11 Score=110.70 Aligned_cols=101 Identities=29% Similarity=0.417 Sum_probs=74.4
Q ss_pred ecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCC
Q psy8139 639 TDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSP 718 (1101)
Q Consensus 639 ~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~ 718 (1101)
.+.|++|.++.+..++.+++.|+|.+|. +++
T Consensus 5 ~~~P~~P~~~~~~~~~~~sv~l~W~~~~-------------------------------------------------~~~ 35 (106)
T 2dju_A 5 SSGPKPPIDLVVTETTATSVTLTWDSGN-------------------------------------------------SEP 35 (106)
T ss_dssp CCSCCCCEEEEEEEEETTEEEEEEECCC-------------------------------------------------SSC
T ss_pred CcCCcCCCCcEEEeccCCEEEEEEcCCC-------------------------------------------------CCC
Confidence 3567788888777777777777777541 235
Q ss_pred cceEEEEEEeCCCC-CceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCC
Q psy8139 719 VLGYLVEHRRTGSP-YWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAP 792 (1101)
Q Consensus 719 i~~Y~V~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p 792 (1101)
|.+|.|+|+..+.. .|..+.. ...+.++|.+|.|++.|.|+|.|.|..|.|++|....+.|. +..|..||
T Consensus 36 i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~--~~~P~~Pp 106 (106)
T 2dju_A 36 VTYYGIQYRAAGTEGPFQEVDG--VATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTG--EQSGPSSG 106 (106)
T ss_dssp CSEEEEEEEETTCCSCCCCBCC--CCSSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECC--CSSCCCCC
T ss_pred ceEEEEEEEECCCCCCeEEccC--CCccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcC--CCCCCCCC
Confidence 78888888776654 5655432 56788999999999999999999999999988876554433 35666655
No 344
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.28 E-value=1.9e-11 Score=128.35 Aligned_cols=130 Identities=9% Similarity=0.097 Sum_probs=88.0
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEec-cCCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEG-IPTPK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g-~p~~~ 483 (1101)
..+|.|.+++..|+|.|+|.|.|..|... ..+.+.+... +...+....+..|..+.|.|.+.| .|.|.
T Consensus 82 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~-----~~v~~~~~~~------~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~ 150 (226)
T 4f80_A 82 KAALRIHNVTASDSGKYLCYFQDGDFYEK-----ALVELKVAAL------GSDLHVDVKGYKDGGIHLECRSTGWYPQPQ 150 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEE-----EEEEEEEEBC------CCCCEEEEEEEETTEEEEEEEEEEEBSCCE
T ss_pred eEEEEEeeCchHHCeeEEEEEECCCcEEE-----EEEEEeeccc------eecccceeeeccCCceeeEEEeccCCCCCE
Confidence 45799999999999999999999776542 2234433211 122334556788999999999988 59999
Q ss_pred EEEEECCE-EeecCCcEEEEecCC-eeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccC
Q psy8139 484 VSWYKDGF-EIFSSRRQRIVTDND-ISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAP 545 (1101)
Q Consensus 484 v~W~~~g~-~~~~~~~~~~~~~~~-~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~ 545 (1101)
|+|++++. .+............+ ...+.+..+...|.|.|+|.|.|..|....++.|.|..|
T Consensus 151 i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 151 IQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp EEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred EEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 99998654 333222222222222 234455677889999999999999999998888888653
No 345
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.28 E-value=6e-11 Score=126.55 Aligned_cols=174 Identities=13% Similarity=0.080 Sum_probs=99.1
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
....|.|.++++.|+|.|+|.|.|..+....+..+..+.+.+... ..+|.+...|. ..+.+|++++|.|.+.+.+ +.
T Consensus 60 ~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~-~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~ 136 (257)
T 1b6u_A 60 SKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGL-YEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DM 136 (257)
T ss_dssp EEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECS-SCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SE
T ss_pred ceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccC-CCCcceEccCC-CccCCCCEEEEEEeCCCCC-cE
Confidence 456899999999999999999987654333444567777776542 35677766654 4578999999999998764 68
Q ss_pred EEEEECCEEeecCCcEEEEe-cCCeeEEEEeecCCCCCEEEEEEEEeCCCc-----eEEEEEEeeccCCccccCCCCCCC
Q psy8139 484 VSWYKDGFEIFSSRRQRIVT-DNDISTLIIHQAALMDEGEIKCTATNRAGH-----SITKARLRLEAPPTIRLPKQYEDG 557 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~-----~~~s~~l~V~~~p~~~~~~~~~~~ 557 (1101)
+.|+++|..+.......... ......|.|.+++ |+|.|+|.|.+..+. .+....|.|..+|....++.. .
T Consensus 137 ~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~--~ 212 (257)
T 1b6u_A 137 YHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPT--E 212 (257)
T ss_dssp EEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-----------
T ss_pred EEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCc--c
Confidence 99999987654322111111 1224689999998 999999999976432 233478888888776533221 1
Q ss_pred eEEeeCCEEEEEEEEeecCCCeeEEEEC
Q psy8139 558 LLFEMGEIIKLKVSMAGMPPPTARWLHN 585 (1101)
Q Consensus 558 ~~v~~g~~~~l~c~~~g~p~~~v~W~~~ 585 (1101)
.....|..+.|.|. .|.+.+.+.|...
T Consensus 213 ~~~~~g~~~~l~~~-~~~~~~~~~~~~~ 239 (257)
T 1b6u_A 213 PSSETGNPRHLHAA-AEQKLISEEDLNL 239 (257)
T ss_dssp ----------------------------
T ss_pred cCccCCCeEEEEEE-EcchHHHHHHhhh
Confidence 13445778888864 4666778888754
No 346
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.27 E-value=3.7e-11 Score=128.59 Aligned_cols=177 Identities=12% Similarity=0.161 Sum_probs=114.2
Q ss_pred CceeEEccCCeEEEEEEEec--cCCCeEEEEECC----E-Ee---e-----------cCCcEEEEec--CCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEG--IPTPKVSWYKDG----F-EI---F-----------SSRRQRIVTD--NDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g--~p~~~v~W~~~g----~-~~---~-----------~~~~~~~~~~--~~~~~l~I~~l 515 (1101)
|..+.+.+|++++|.|.+.+ .+...+.|++.. . .+ . ...++.+..+ .+..+|+|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 45678899999999999976 335689999832 1 11 0 1134554432 34567999999
Q ss_pred CCCCCEEEEEEEEeCC----CceEEEEEEeec----cCCccccCCCCCCCeEEeeCCEEEEEEEEee-cCCC-eeEEEEC
Q psy8139 516 ALMDEGEIKCTATNRA----GHSITKARLRLE----APPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPPP-TARWLHN 585 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~----g~~~~s~~l~V~----~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~~ 585 (1101)
+.+|+|.|.|.+.+.. +.....+.|.|. .+|.+...+. ...+..|..+.|.|.+.+ .|.+ .+.|.++
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~---~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 163 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAP---GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 163 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC---------CCEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecC---CcccCCCCcEEEEEEEeeEeCCCeEEEEEeC
Confidence 9999999999998863 222233566665 2343321111 113456999999999998 6655 8999998
Q ss_pred CeecCC--------CCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEEecCCCC
Q psy8139 586 GEPLTS--------GGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTVTDRPLP 644 (1101)
Q Consensus 586 g~~l~~--------~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v~~~P~~ 644 (1101)
+..+.. .+.+.+ .+.|.|......+ |.|+|.|.|..+.......+.+..+|.|
T Consensus 164 ~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~~~~~~ 224 (253)
T 3liz_H 164 SLSSGVHTFPAVLQSDLYTL-----SSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPRDCGCK 224 (253)
T ss_dssp TBCTTEEECCCEEETTEEEE-----EEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC-----
T ss_pred CeecceEeCCccccCCeEEE-----EEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCcccCCC
Confidence 864321 111211 3578899998888 9999999999887666666655533333
No 347
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.27 E-value=5.6e-11 Score=123.12 Aligned_cols=156 Identities=11% Similarity=-0.043 Sum_probs=99.5
Q ss_pred cceEEEEEEeCCCCCceeecccc-cCccEEEE--cCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCccc
Q psy8139 719 VLGYLVEHRRTGSPYWVRASPHM-VEDTELMV--SGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFI 795 (1101)
Q Consensus 719 i~~Y~V~~~~~~~~~~~~~~~~~-~~~~~~~i--~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~ 795 (1101)
.+.|.|.|+..+...|..+.... ...+.+.+ .+|.+++.|.|+|.|.|..|.|.++ . .........++.||.++
T Consensus 33 ~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V~A~N~~G~~~s~-~--~~~~~~~~v~p~pP~~l 109 (210)
T 3n06_B 33 PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGSSFSD-E--LYVDVTYIVQPDPPLEL 109 (210)
T ss_dssp CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEEEEEETTEEEECC-C--EEECGGGCBCCCCCEEE
T ss_pred CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEEEEEcCCCCeeCC-c--EEEchhheEecCCCceE
Confidence 36888888877666777654211 22345544 6799999999999999999987422 1 22223335678888877
Q ss_pred ccc------cccceeccccCCCCCCccccceeeeecCc-chhHHHHhHhhhceeeEEeeeeccCCCCCCceeeee-cccc
Q psy8139 796 RAL------HDTTALEDEKPRNTNNCDYESKRTFQSTS-PMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVE-TNEH 867 (1101)
Q Consensus 796 ~~~------~~s~~~~~w~p~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~-~~~~ 867 (1101)
... ..+.+.+.|.+|.... ..+| ..+ .|.|.|+..+. ..|...... ...+
T Consensus 110 ~~~~~~~~~~~~~l~l~W~~p~~~~---------~~~g~~~~------------~Y~v~y~~~~~-~~~~~~~~~~~~~~ 167 (210)
T 3n06_B 110 AVEVKQPEDRKPYLWIKWSPPTLID---------LKTGWFTL------------LYEIRLKPEKA-AEWEIHFAGQQTEF 167 (210)
T ss_dssp EEEEECCSSSCCEEEEEEECCTTCC---------CTTSSCCE------------EEEEEEECTTC-SSCEEEEEETCSEE
T ss_pred EEEEecCcCCCceEEEEcCCCCCcc---------ccCCeEEE------------EEEEEEecCCC-CCCEEEeccCceEE
Confidence 622 1367788898765421 0111 234 89999988763 457553322 1344
Q ss_pred ccCCCCCCCCCccCcccce--eeccccccc----CceeecccCCC
Q psy8139 868 TGTGAPSDNENESDYFPEK--TIDESVYGY----DTIVYGYDSDD 906 (1101)
Q Consensus 868 ~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~----~~~v~~~t~e~ 906 (1101)
.+.+|. +++.|. |+|.|..|. |..+...|.++
T Consensus 168 ~l~~L~-------p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~~ 205 (210)
T 3n06_B 168 KILSLH-------PGQKYLVQVRCKPDHGYWSAWSPATFIQIPSD 205 (210)
T ss_dssp EECCCC-------TTCEEEEEEEEEESSSCCCCCCCCEEEECCTT
T ss_pred EEeccC-------CCCEEEEEEEEecCCCcccCCCCceeEECcCC
Confidence 455555 999999 999998775 55565555443
No 348
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.27 E-value=3e-11 Score=111.34 Aligned_cols=101 Identities=21% Similarity=0.236 Sum_probs=89.8
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.|...|.++.+..|+++.|.|.+.|.|.+.+.|++++..+....++.+........|.|.++...|+|.|+|.|.|
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 36788888889999999999999999999999999999999988877778777666677999999999999999999999
Q ss_pred CCCceEEEEEEeeccCCcccc
Q psy8139 530 RAGHSITKARLRLEAPPTIRL 550 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~~~~ 550 (1101)
..|.....+.|.|..+|..+.
T Consensus 85 ~~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp SSCEEECCEEEEEECSCSCCC
T ss_pred CCCcEEEEEEEEEECCCCCCC
Confidence 999888889999988775543
No 349
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.27 E-value=1.8e-11 Score=111.00 Aligned_cols=77 Identities=21% Similarity=0.250 Sum_probs=53.9
Q ss_pred CCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCc
Q psy8139 700 DRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEP 779 (1101)
Q Consensus 700 ~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~ 779 (1101)
+.+++.|+|++|.. +|.+|++|.|+|+..+. .|..... ...++++|.+|.|++.|.|+|.|.|..|.|++|....+
T Consensus 20 s~~sv~l~W~~p~~-~g~~i~~Y~v~~~~~~~-~~~~~~~--~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~ 95 (106)
T 1x4x_A 20 SATCAQVNWEVPLS-NGTDVTEYRLEWGGVEG-SMQICYC--GPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVAC 95 (106)
T ss_dssp ETTEEEEECCCCSC-SSSCCCEEEEEEESSTT-SCCEEEE--ESCSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEE
T ss_pred CCCEEEEEEcCCCC-CCCcceEEEEEEEcCCC-ceEEEEe--CCcceEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEE
Confidence 34444455554433 44567888888876553 3433322 56689999999999999999999999999888765444
Q ss_pred E
Q psy8139 780 L 780 (1101)
Q Consensus 780 ~ 780 (1101)
.
T Consensus 96 ~ 96 (106)
T 1x4x_A 96 V 96 (106)
T ss_dssp E
T ss_pred E
Confidence 3
No 350
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.26 E-value=3.6e-12 Score=120.80 Aligned_cols=109 Identities=24% Similarity=0.331 Sum_probs=78.6
Q ss_pred EEEEeCCCCceeEE-EEEEe---cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCC
Q psy8139 621 AHGVNSLGEDVASF-LVTVT---DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDS 696 (1101)
Q Consensus 621 c~A~N~~G~~~~s~-~l~v~---~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~ 696 (1101)
|.|.|..|.+..+. .+.+. +.|++|.++.+...+.+++.|+|++|...+
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~--------------------------- 55 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPN--------------------------- 55 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCC---------------------------
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCC---------------------------
Confidence 45778888876553 23333 467888888888888888888888765333
Q ss_pred CCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCC--ceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCC
Q psy8139 697 PSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY--WVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPG 774 (1101)
Q Consensus 697 ~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 774 (1101)
+.|.+|.|+|+..+... |... ......++++|.+|.|++.|.|+|.|.|..|.|++|
T Consensus 56 --------------------g~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 114 (130)
T 1wfo_A 56 --------------------GIILAYQITHRLNTTTANTATVE-VLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAA 114 (130)
T ss_dssp --------------------SCCCEEEEEEEESSCCCSCCCEE-EECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEE
T ss_pred --------------------CceEEEEEEEEECCCCCceEEEE-EeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCc
Confidence 34777888777765432 2211 223678899999999999999999999999998876
Q ss_pred CCC
Q psy8139 775 PLS 777 (1101)
Q Consensus 775 ~~s 777 (1101)
...
T Consensus 115 ~~~ 117 (130)
T 1wfo_A 115 EAL 117 (130)
T ss_dssp EEE
T ss_pred ccE
Confidence 543
No 351
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=2.4e-11 Score=110.86 Aligned_cols=92 Identities=21% Similarity=0.333 Sum_probs=66.2
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
..|.+|.++.+..++.++|.|+|++|.. .++.|
T Consensus 6 ~~P~~p~~l~~~~~~~~sv~l~W~~p~~-----------------------------------------------~~g~i 38 (109)
T 2e7h_A 6 SGPPAVSDIRVTRSSPSSLSLAWAVPRA-----------------------------------------------PSGAV 38 (109)
T ss_dssp CSSCCCCCCEEEEEETTEEEEECCCCCC-----------------------------------------------SSSCC
T ss_pred CCCCCCCccEEEecCCCEEEEEeCCCCC-----------------------------------------------CCCcE
Confidence 3566677777777777777777776542 23457
Q ss_pred ceEEEEEEeCCC---CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 720 LGYLVEHRRTGS---PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 720 ~~Y~V~~~~~~~---~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
.+|.|.|+..++ ..|..+. ...+.++|.+|.|++.|.|+|+|.|..|.|++|....+.|
T Consensus 39 ~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 100 (109)
T 2e7h_A 39 LDYEVKYHEKGAEGPSSVRFLK---TSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQT 100 (109)
T ss_dssp CEEEEEEEETTCCSTTTSEEEE---ESSSEEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCC
T ss_pred eEEEEEEEECCCCCCceeEEEc---cCCCEEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEc
Confidence 888888877652 2233322 4567999999999999999999999999999887655444
No 352
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.26 E-value=2.2e-11 Score=110.31 Aligned_cols=86 Identities=28% Similarity=0.419 Sum_probs=78.2
Q ss_pred CeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 557 GLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 557 ~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
.+.+..|+.+.|.|.+.|.|.|.+.|+++|..+..+.++.+...+...+|.|.++...|.|.|+|.|.|..|....++.|
T Consensus 22 ~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 101 (107)
T 3knb_B 22 PVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAV 101 (107)
T ss_dssp CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEE
Confidence 45788999999999999999999999999999998888888877778899999999999999999999999999889999
Q ss_pred EEecCC
Q psy8139 637 TVTDRP 642 (1101)
Q Consensus 637 ~v~~~P 642 (1101)
.|..+|
T Consensus 102 ~V~~pP 107 (107)
T 3knb_B 102 TVLEPP 107 (107)
T ss_dssp EEEC--
T ss_pred EEEcCC
Confidence 998765
No 353
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.25 E-value=8.9e-12 Score=115.54 Aligned_cols=98 Identities=36% Similarity=0.599 Sum_probs=73.6
Q ss_pred EecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCC
Q psy8139 638 VTDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGS 717 (1101)
Q Consensus 638 v~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~ 717 (1101)
+...|.+|.++.+...+.+++.|+|.+|. ++++
T Consensus 12 ~~~~P~~P~~~~~~~~~~~sv~l~W~~p~-----------------------------------------------~~~~ 44 (117)
T 1uem_A 12 LSDLPGPPSKPQVTDVTKNSVTLSWQPGT-----------------------------------------------PGTL 44 (117)
T ss_dssp SCCSCBCCCCCEEEEECSSCEEEECCCCB-----------------------------------------------CSSS
T ss_pred CCCCccCCCCCEEEEecCCEEEEEEeCCC-----------------------------------------------CCCc
Confidence 34567777777777777777777776553 3345
Q ss_pred CcceEEEEEEeCC-CCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 718 PVLGYLVEHRRTG-SPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
+|.+|.|+|+..+ ...|..+... ...+.++|.+|.|++.|.|+|+|.|..|.|++|..+..+++.
T Consensus 45 ~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~ 110 (117)
T 1uem_A 45 PASAYIIEAFSQSVSNSWQTVANH-VKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQ 110 (117)
T ss_dssp CCCEEEEEEEETTTEEEEEEEEEE-ECSSEEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECC
T ss_pred CceEEEEEEEECCCCCceeEcccc-cCcCEEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEcc
Confidence 6788888887764 4567665432 567899999999999999999999999999999888755443
No 354
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.25 E-value=9.8e-13 Score=138.43 Aligned_cols=154 Identities=14% Similarity=0.058 Sum_probs=91.0
Q ss_pred CCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCc
Q psy8139 714 DGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPS 793 (1101)
Q Consensus 714 ~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~ 793 (1101)
+++..|++|.|++.......+..... +..+++++.+|.|++.|.|+|.|.|..|.|++|......+. ...|+.+|.
T Consensus 17 ~~~~~Vt~Y~~~~~~~~~~~~~~~~~--~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~--~~~~~~~~~ 92 (232)
T 4go6_B 17 GTNVMVTHYFLPPDDAVPSDDDLGTV--PDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTC--LPGFPGAPC 92 (232)
T ss_dssp SSEEEECEEECCCC--------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECC--CTTSCCCCE
T ss_pred CCCEEEEEEEEEeeCCCCCcEEEEEC--CCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeec--CCCCCCCCe
Confidence 44556889999876554433332222 56788999999999999999999999999988766544433 356666666
Q ss_pred ccc-cccccceeccccCCCCCCccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCC------------Ccee
Q psy8139 794 FIR-ALHDTTALEDEKPRNTNNCDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNE------------DDYD 860 (1101)
Q Consensus 794 ~~~-~~~~s~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~------------~~~~ 860 (1101)
... ....+++.+.|.||...+ |++. +|.|.|+....... |...
T Consensus 93 ~~~~~~~~~sv~l~W~~P~~~~------------G~i~------------~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
T 4go6_B 93 AIKISKSPDGAHLTWEPPSVTS------------GKII------------EYSVYLAIQSSQAGGELKSSTPAQLAFMRV 148 (232)
T ss_dssp EEEEEEETTEEEEEEECCSCCS------------SCCC------------EEEEEEEEC-------------CCEEEEEE
T ss_pred eeEEecCCCEEEEEEeCCCCCC------------Ccee------------eEEEEEEECCCCCcceeeeccCCceeeEEE
Confidence 654 455667888998865543 4455 77777765543221 1111
Q ss_pred eee---ccccccCCCCCCCCCccCcccce--eeccccccc
Q psy8139 861 IVE---TNEHTGTGAPSDNENESDYFPEK--TIDESVYGY 895 (1101)
Q Consensus 861 ~v~---~~~~~~~~~~~~l~~~~~~t~Y~--V~a~n~~G~ 895 (1101)
... ...+.+.++...+.+|.+.+.|. |+|.|..|.
T Consensus 149 ~~~~~~~~~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~ 188 (232)
T 4go6_B 149 YCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGY 188 (232)
T ss_dssp EEESSSEEEEEHHHHTTBCBEESSSEEEEEEEEEECSSCB
T ss_pred EeccCceEEEEccccEEeeecCccCCceEEEEEEECCCcC
Confidence 100 01223344455566777999999 999999998
No 355
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.25 E-value=7.9e-11 Score=120.73 Aligned_cols=124 Identities=10% Similarity=0.086 Sum_probs=87.0
Q ss_pred ccceEEEcCccCCccEEEEEEEEecC-CCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVV-GFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~-G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~ 482 (1101)
....|.|.++++.|+|.|+|.|.|.. |.+.. +..+.+.+... ..+|.+...+ ...+.+|++++|.|.+.+. .+
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~---s~~~~l~V~~~-~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~ 129 (198)
T 1ugn_A 56 KKGQFPIPSITWEHTGRYRCYYGSDTAGRSES---SDPLELVVTGA-YIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FD 129 (198)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEEETTTEECCC---CCCEEEEEECS-SCCCEEEEES-CSEEETTCCEEEEEECSSC-CS
T ss_pred cccEEEECCCCHHHCeEEEEEEECCCCCcccC---CccEEEEEccc-ccCCccccCC-ccccCCCCcEEEEEecCCC-Cc
Confidence 45789999999999999999999987 53322 34456655432 2356655544 4678899999999999988 77
Q ss_pred eEEEEECCEEeecCCcE-EEEe-cCCeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 483 KVSWYKDGFEIFSSRRQ-RIVT-DNDISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~-~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
.+.|+++|..+...... .... .+....|.|.++...|+|.|+|.|.|..+.
T Consensus 130 ~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~ 182 (198)
T 1ugn_A 130 GFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSP 182 (198)
T ss_dssp EEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTST
T ss_pred EEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCC
Confidence 99999999876432211 1111 223568999999999999999999998763
No 356
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.24 E-value=6e-11 Score=107.01 Aligned_cols=95 Identities=23% Similarity=0.378 Sum_probs=86.6
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.|...+.+..+..|+++.|.|.+.|.|.|.+.|++++..+....++.+...++...|.|.++...|+|.|+|.|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 56788888899999999999999999999999999999999998888888877777789999999999999999999999
Q ss_pred CCceEEEEEEeeccC
Q psy8139 531 AGHSITKARLRLEAP 545 (1101)
Q Consensus 531 ~g~~~~s~~l~V~~~ 545 (1101)
.|.....+.|.|...
T Consensus 87 ~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 87 KGEASDYATLDVTGG 101 (103)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred CCcEEEEEEEEEECC
Confidence 999988888888754
No 357
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.24 E-value=6.5e-11 Score=109.46 Aligned_cols=93 Identities=20% Similarity=0.285 Sum_probs=72.6
Q ss_pred CCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcc
Q psy8139 641 RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVL 720 (1101)
Q Consensus 641 ~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~ 720 (1101)
.|++|.++.+...+.+++.|+|++|... ++.|.
T Consensus 17 ~P~~P~~l~~~~~~~~si~l~W~~p~~~-----------------------------------------------~~~i~ 49 (116)
T 1x5g_A 17 LPGPAPNLRAYAASPTSITVTWETPVSG-----------------------------------------------NGEIQ 49 (116)
T ss_dssp CCCCCSSCEEEEEETTEEEEECCCCSCC-----------------------------------------------SSCCS
T ss_pred CCcCCCccEEEecCCCEEEEEEeCCCCC-----------------------------------------------CCccc
Confidence 5677788887777777777777765432 23588
Q ss_pred eEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 721 GYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 721 ~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
+|.|+|+..+...|..+. ...++++|.+|.|++.|.|+|.|.|..|.|++|....+.|..
T Consensus 50 ~Y~v~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 109 (116)
T 1x5g_A 50 NYKLYYMEKGTDKEQDVD---VSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLS 109 (116)
T ss_dssp EEEEEEEETTCCCCCCEE---ECSSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCC
T ss_pred EEEEEEEECCCCccEEEe---cCCceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCC
Confidence 899998888766664332 467899999999999999999999999999998877666554
No 358
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.24 E-value=2.7e-11 Score=125.92 Aligned_cols=138 Identities=13% Similarity=0.048 Sum_probs=94.5
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecC-ceeEEccCCeEEEEEEEeccC--C
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRAL-HDTTALEDEKVEFTVQVEGIP--T 481 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p-~~~~v~~g~~v~L~C~~~g~p--~ 481 (1101)
...|.|.+++..|+|.|+|.|.|..+.. .+..+.+.+.. ..+|.+...+ ..+.+..|++++|.|.+.|.| .
T Consensus 63 ~~~l~I~~v~~~D~G~Y~C~a~n~~~~~----~s~~~~l~v~~--~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~ 136 (213)
T 2x1w_L 63 KKGFTIPSYMISYAGMVFCEAKINDESY----QSIMYIVVVVG--YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVG 136 (213)
T ss_dssp TTEEEEEGGGTTTCSEEEEEEC----CE----ECCCEEEEECB--CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBC
T ss_pred CccEEEccCChhcCceEEEEEEECCeeE----EEEEEEEEEeC--CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCc
Confidence 3579999999999999999999843321 12335555532 2345454444 445899999999999999855 4
Q ss_pred CeEEEEECCEEeecCCc-EEEEe-------cCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCcc
Q psy8139 482 PKVSWYKDGFEIFSSRR-QRIVT-------DNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTI 548 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~~~-~~~~~-------~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~ 548 (1101)
+.+.|++++..+..... ..... ....++|.|.++...|+|.|+|.|.|..|....++.|.|..+|.+
T Consensus 137 ~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 137 IDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp CEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred eEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 57999998765322111 00000 112347999999999999999999999999988999999887754
No 359
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.24 E-value=2.1e-11 Score=111.06 Aligned_cols=94 Identities=22% Similarity=0.313 Sum_probs=74.0
Q ss_pred CCCCCCCcccCC-CCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEE
Q psy8139 684 PGPPGKPQLLPD-SPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRI 762 (1101)
Q Consensus 684 ~~~p~~p~~~~~-~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 762 (1101)
.+.|++|..+.. ....+.+++.|+|++|. +.++.|.+|.|+|+..+...|.... ...+.++|.+|.|++.|.|+|
T Consensus 5 ~~~P~~P~~l~~~~~~~~~~sv~l~W~~p~-~~~g~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~l~~L~p~t~Y~~~V 80 (108)
T 2dm4_A 5 SSGPDAPRNLQLSLPREAEGVIVGHWAPPI-HTHGLIREYIVEYSRSGSKMWASQR---AASNFTEIKNLLVNTLYTVRV 80 (108)
T ss_dssp CCCTTSCEEEEEECCTTCSSCEEEEEECCS-CCSSCEEEEEEEEEETTCSCCEEEE---ESSSEEEECSCCSSCEEEEEE
T ss_pred CCCCcCCcCeEEEEeccCCCEEEEEEcCCC-CCCCcEEEEEEEEEECCCCCeEEec---CCccEEEeCCCCCCCEEEEEE
Confidence 345665554421 12357899999999997 5667799999999998887787653 456799999999999999999
Q ss_pred EEEcCCccCCCCCCCCcEE
Q psy8139 763 TAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 763 ~A~n~~G~g~~S~~s~~~t 781 (1101)
.|.|..|.|++|....+.|
T Consensus 81 ~A~n~~G~g~~S~~~~~~T 99 (108)
T 2dm4_A 81 AAVTSRGIGNWSDSKSITT 99 (108)
T ss_dssp EEEESSCEEEECCCEEEEC
T ss_pred EEECCCceeCCCCCEEEEC
Confidence 9999999988876555444
No 360
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.24 E-value=5.6e-11 Score=126.96 Aligned_cols=167 Identities=11% Similarity=0.100 Sum_probs=98.5
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--E--E-ee--------------cCCcEEEEec--CCeeEEEEeec
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--F--E-IF--------------SSRRQRIVTD--NDISTLIIHQA 515 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~--~-~~--------------~~~~~~~~~~--~~~~~l~I~~l 515 (1101)
|..+.+..|++++|.|.+.+.+ .+.+.|++.. . . +. ...++.+..+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 4456789999999999998865 5789999842 1 1 10 1245555543 45668999999
Q ss_pred CCCCCEEEEEEEEeCCCc---------e----EEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC
Q psy8139 516 ALMDEGEIKCTATNRAGH---------S----ITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP 577 (1101)
Q Consensus 516 ~~~d~g~Y~C~a~n~~g~---------~----~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~ 577 (1101)
...|+|.|.|.+.+..|. . ...+.|.|.. +|.+...+. ...+..|..++|.|.+.+. |.
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p---~~~~~~g~~v~L~C~~~g~~P~ 163 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAP---SSKSTSGGTAALGCLVKDYFPE 163 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC--------------CCCEEEEEBSS
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecC---cccccCCCcEEEEEEEeeEECC
Confidence 999999999999987651 1 1235777765 343322111 1134578899999999986 76
Q ss_pred C-eeEEEECCeecCCCCceEEEeecc----eEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 578 P-TARWLHNGEPLTSGGRYEITHTDR----YLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 578 ~-~v~W~~~g~~l~~~~~~~~~~~~~----~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
+ .|+|++++..+.......+...++ .+.|.|......+ |.|+|.|.|..+.
T Consensus 164 pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~ 219 (257)
T 3bn9_D 164 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 219 (257)
T ss_dssp CCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGT
T ss_pred CcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCC
Confidence 6 999999887643110000111111 3456777777666 9999999996544
No 361
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.23 E-value=4.2e-11 Score=120.04 Aligned_cols=116 Identities=15% Similarity=0.136 Sum_probs=86.0
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
.+++|.|.++++.|+|.|+|.|.|..|.... +..+.+.+... ...|.+. ..+..++|.|.+.|.|.|.
T Consensus 59 ~~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~---~~~~~l~V~~~-~~~p~i~--------~~~~~v~L~C~~~g~p~p~ 126 (176)
T 1hng_A 59 ANGDLKIKNLTRDDSGTYNVTVYSTNGTRIL---NKALDLRILEM-VSKPMIY--------WECSNATLTCEVLEGTDVE 126 (176)
T ss_dssp TTSCEEESSCCGGGCEEEEEEEEETTCCEEE---EEEEEEEEECC-CCCCEEE--------EETTTTEEEEECSSCSSCE
T ss_pred CCCcEEEcccccccCEEEEEEEEeCCCCEEE---EEEEEEEEeCC-CCCCEEE--------ecCCcEEEEEEecCCCCcE
Confidence 3467999999999999999999998876411 12344444322 2234332 2345689999999999999
Q ss_pred EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEee
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRL 542 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V 542 (1101)
+.|+++|..+..... +.|.++...|+|.|+|.|.|..|...+...|.+
T Consensus 127 i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 127 LKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EEEEETTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEECCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 999999988764332 445578899999999999999998887765554
No 362
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.23 E-value=1.2e-10 Score=118.28 Aligned_cols=118 Identities=13% Similarity=0.141 Sum_probs=89.1
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
....|.|.++++.|+|.|+|.|.|..|.+. .+..+.+.+... ..+|.+...| +..+.+|++++|.|.+.+. .+.
T Consensus 55 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~---~s~~~~l~V~~~-~~~p~i~~~p-~~~v~~G~~v~L~C~~~~~-~~~ 128 (188)
T 1oll_A 55 NKVKFYIPDMNSRMAGQYSCIYRVGELWSE---PSNLLDLVVTEM-YDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSM 128 (188)
T ss_dssp CEEEEEESSCCGGGCEEEEEEEEETTEECC---CCCCEEEEEESC-SCCCEEEEES-CSEEETTCEEEEEEECSSS-CSE
T ss_pred ceeEEEeCcCCcccCeEEEEEecCCCCCCC---CCCceEEEeccc-CCCCeEEECC-CCccccCCEEEEEEEcCCC-CCE
Confidence 456899999999999999999988655433 235566665432 3467776656 4568899999999998764 568
Q ss_pred EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
+.|+++|..+.. ..........|.|.++...|+|.|+|.|.|..
T Consensus 129 ~~w~k~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 129 FLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEEEESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred EEEEECCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 999998865543 11223455689999999999999999999865
No 363
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.23 E-value=3.1e-11 Score=109.96 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=49.8
Q ss_pred CCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 717 SPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 717 ~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
+.|.+|.|.|+..+...|..... ....++++|.+|.|++.|.|+|+|.|..|.|++|....+.|
T Consensus 36 g~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 99 (108)
T 2djs_A 36 GIILDYEIRYYEKEHNEFNSSMA-RSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQT 99 (108)
T ss_dssp SCEEEEEEEEEETTSCSTTCEEE-EESSSEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEEC
T ss_pred CeEEEEEEEEEECCCCCcceeEE-ecCccEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEe
Confidence 45888888888776654432221 26778999999999999999999999999999887665444
No 364
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=4e-11 Score=114.18 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=74.8
Q ss_pred CCCCCceEEEEeeCCC-CCCCCCcceEEEEEEeCCCCCc--eeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCC
Q psy8139 697 PSLDRDVFTIRWEPPE-YDGGSPVLGYLVEHRRTGSPYW--VRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEP 773 (1101)
Q Consensus 697 ~~~~~~si~l~W~pP~-~~~~~~i~~Y~V~~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 773 (1101)
...+.+++.|+|++|. .+.++.|.+|.|.|+..+...+ ..+.......++++|.+|.|++.|.|+|.|.|..|.|++
T Consensus 28 ~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 107 (134)
T 2edx_A 28 VSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPE 107 (134)
T ss_dssp ECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEESCCTTCEEEEEEEEEETTBCCCC
T ss_pred EeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCCC
Confidence 3567889999999984 3455679999999998765432 333322367799999999999999999999999999888
Q ss_pred CCCCCcEEecCCCCCCCCCcccc
Q psy8139 774 GPLSEPLTVTYQRSPAAAPSFIR 796 (1101)
Q Consensus 774 S~~s~~~t~~~~~~P~~~p~~~~ 796 (1101)
|....+.|. ++.|+.+|.++.
T Consensus 108 S~~~~~~T~--~~~P~~~P~~l~ 128 (134)
T 2edx_A 108 SSPVLVRTD--EDVPSGPPRKVE 128 (134)
T ss_dssp CCCEEEECC--CCSSCCCCCCCC
T ss_pred CCCEEeecC--CCCCCCCCceeE
Confidence 765544443 366668887765
No 365
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=3.1e-11 Score=109.54 Aligned_cols=77 Identities=25% Similarity=0.334 Sum_probs=56.3
Q ss_pred ceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEE
Q psy8139 702 DVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 702 ~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t 781 (1101)
+++.|+|++|.. .+++|.+|.|+|+..+...|..+. ...++++|.+|.|++.|.|+|.|.|..|.|++|....+.|
T Consensus 22 ~si~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 97 (106)
T 2ed8_A 22 TSILITWEPPAY-ANGPVQGYRLFCTEVSTGKEQNIE---VDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVT 97 (106)
T ss_dssp TEEEEEEECCSS-CSSCCCEEEEEEEETTTCCEEEEE---ECSSCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEEC
T ss_pred CEEEEEECCCCC-CCCCeeEEEEEEEECCCCceEEEe---CCccEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEc
Confidence 344444444432 234688999999888776776553 3578999999999999999999999999988876554444
Q ss_pred e
Q psy8139 782 V 782 (1101)
Q Consensus 782 ~ 782 (1101)
.
T Consensus 98 ~ 98 (106)
T 2ed8_A 98 L 98 (106)
T ss_dssp C
T ss_pred C
Confidence 3
No 366
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.23 E-value=8.4e-11 Score=122.41 Aligned_cols=116 Identities=12% Similarity=0.121 Sum_probs=89.3
Q ss_pred eEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEE
Q psy8139 407 ELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSW 486 (1101)
Q Consensus 407 ~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W 486 (1101)
.|.|.++++.|+|.|+|.|.|..|.+. .+..+.+.+... ..+|.+...| +..+.+|++++|.|.+.+.|.+.+.|
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~---~s~~~~l~V~~~-~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W 139 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFR---YSDTLELVVTGL-YGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSL 139 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEE---ECCCEEEEEECS-SCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEE
T ss_pred EEEEcccccccCEEEEEEEEcCCCcee---ecCCEEEEEcCc-ccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEE
Confidence 899999999999999999999765332 234566665432 3466666555 56789999999999777788889999
Q ss_pred EECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 487 YKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 487 ~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
+++|..+... . ........|.|.++..+|+|.|+|.|.|..
T Consensus 140 ~k~g~~~~~~--~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 140 AKEGELSLPQ--H--QSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp EETTCSSCCS--E--EECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred EECCCccccc--c--cCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 9998765431 1 123344689999999999999999999864
No 367
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.23 E-value=2.2e-11 Score=126.95 Aligned_cols=124 Identities=26% Similarity=0.361 Sum_probs=95.4
Q ss_pred EEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCCeEEEE
Q psy8139 409 MVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTPKVSWY 487 (1101)
Q Consensus 409 ~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~~v~W~ 487 (1101)
.|.+++..|.|.|+|.|.|..|.... ....+.+.. .+|.+...|....+..|+.+.|.|.+ .|.|.+.+.|+
T Consensus 72 ~i~~v~~~d~G~Y~C~~~n~~g~~~~----~~~~l~v~~---~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~ 144 (217)
T 2vr9_A 72 TMQGKKEQDGGEYWCVAKNRVGQAVS----RHASLQIAV---LRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWI 144 (217)
T ss_dssp CCBSSSCBCCEEEEEEEEETTEEEEC----CCEEEEECE---ECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEE
T ss_pred EeccCCcccCceEEEEEecCCCcccc----ccceEEEEE---eCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEE
Confidence 68899999999999999998875422 223343331 34555666778889999999999999 89999999999
Q ss_pred ECCEEeec--------CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEee
Q psy8139 488 KDGFEIFS--------SRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRL 542 (1101)
Q Consensus 488 ~~g~~~~~--------~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V 542 (1101)
+++..+.. ..++.... ++ .|.|.++...|.|.|+|.|.|..|....+..+.+
T Consensus 145 ~~g~~~~~~~~~~~~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv 204 (217)
T 2vr9_A 145 KDGVPLDDLKAMSFGASSRVRIVD-GG--NLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLI 204 (217)
T ss_dssp ETTEEECCCCCC---CCCSEEEET-TT--EEEESSCCSTTCEEEEEEEEETTEEEECCCEEEE
T ss_pred ECCcCCCcccccccccCCcEEecC-CC--cEEEeeCCHHHCeEEEEEEEcccceeccccEEEE
Confidence 99998873 23333332 22 7999999999999999999999998776644444
No 368
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.22 E-value=2.6e-10 Score=123.93 Aligned_cols=180 Identities=15% Similarity=0.144 Sum_probs=116.9
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--E---Eee--------------cCCcEEEEe-cCCeeEEE
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--F---EIF--------------SSRRQRIVT-DNDISTLI 511 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~---~~~--------------~~~~~~~~~-~~~~~~l~ 511 (1101)
.+.+...|..+.+.+|++++|.|.+.+.|.+.+.|++++ . .+. ...++.+.. ..+..+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 455666788899999999999999988888899999853 1 110 124555554 24566899
Q ss_pred EeecCCCCCEEEEEEEEeCCCc------eEEEEEEeeccCCccccCCCC----CCCeEEeeCCEEEEEEEEeec-CC-Ce
Q psy8139 512 IHQAALMDEGEIKCTATNRAGH------SITKARLRLEAPPTIRLPKQY----EDGLLFEMGEIIKLKVSMAGM-PP-PT 579 (1101)
Q Consensus 512 I~~l~~~d~g~Y~C~a~n~~g~------~~~s~~l~V~~~p~~~~~~~~----~~~~~v~~g~~~~l~c~~~g~-p~-~~ 579 (1101)
|.++...|+|.|.|.+.|..|. ....+.|.|........+|.. +....+..|..+.|.|.+.|. |. +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 9999999999999999995321 112346777653211111110 000112257889999999987 43 69
Q ss_pred eEEEECCeecCCCCceE---E---E-eecc----eEEEEEccCCCC-CCeEEEEEEEeCCCCce
Q psy8139 580 ARWLHNGEPLTSGGRYE---I---T-HTDR----YLNLRISDARRA-DRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 580 v~W~~~g~~l~~~~~~~---~---~-~~~~----~~sl~i~~l~~~-~~y~y~c~A~N~~G~~~ 631 (1101)
+.|+++|.++..+.... . . ..++ .+.|.|...... +.+.|+|.|.|......
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 99999998886532111 0 0 0111 234667666554 46789999999876544
No 369
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.22 E-value=8.4e-11 Score=118.94 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=102.8
Q ss_pred CCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcc
Q psy8139 361 DRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEP 440 (1101)
Q Consensus 361 ~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~ 440 (1101)
....++|.|.... +...|.+. ..+.. .......|.|.++++.|+|.|+|.|.|..|.+.. +..
T Consensus 21 ~G~~v~L~C~~~~-----~~~~~~W~--k~g~~-------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~---s~~ 83 (184)
T 2gi7_A 21 LEKPVTLRCQGPP-----GVDLYRLE--KLSSS-------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLP---SDQ 83 (184)
T ss_dssp TTCCEEEEEECST-----TCSEEEEE--ETTTC-------CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCC---CCC
T ss_pred CCCcEEEEEeCCC-----CCCEEEEE--ECCcc-------ccCcccEEEECcCChhhCceEEEEEEcCCCccCC---CCC
Confidence 3567888888652 22233322 11111 1234578999999999999999999998764332 345
Q ss_pred eEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCC
Q psy8139 441 LTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDE 520 (1101)
Q Consensus 441 vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~ 520 (1101)
+.+.+.. ...+|.+...| +..+..|++++|.|.+.+.| +.+.|+++|..+...... ......|.|.++...|+
T Consensus 84 ~~l~V~~-~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~----~~~~~~L~i~~v~~~D~ 156 (184)
T 2gi7_A 84 LELVATG-VFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPE----RWYRASFPIITVTAAHS 156 (184)
T ss_dssp EEEEEES-SSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCC----EEEEESSSEEEETTCCS
T ss_pred EEEEecC-cCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecC----CCceEEEEEccCCccCC
Confidence 6666532 23467776666 45678999999999987765 599999998766542211 11234799999999999
Q ss_pred EEEEEEEEeCCCc
Q psy8139 521 GEIKCTATNRAGH 533 (1101)
Q Consensus 521 g~Y~C~a~n~~g~ 533 (1101)
|.|+|.|.|..+.
T Consensus 157 G~Y~C~a~n~~~~ 169 (184)
T 2gi7_A 157 GTYRCYSFSSRDP 169 (184)
T ss_dssp EEEEEEEECTTST
T ss_pred eEEEEEEEeCCCC
Confidence 9999999998653
No 370
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=6.9e-11 Score=109.66 Aligned_cols=113 Identities=22% Similarity=0.340 Sum_probs=89.2
Q ss_pred CCCCCCCCCcceEEEeccCCCCCCeeee---cCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCC
Q psy8139 430 GFSEPGPLSEPLTVTYQRSPAAAPSFIR---ALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDND 506 (1101)
Q Consensus 430 G~~~~s~~s~~vtv~~~~~~~~~P~~~~---~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 506 (1101)
|.+.++..+..+.+. ....+|.+.. .+..+.+..|+++.|.|.+.|.|.|.+.|++++..+. ..++.+...+.
T Consensus 2 G~s~p~~~~~~v~~~---~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~ 77 (118)
T 2e7c_A 2 SSGSSGTLAQPVTIR---EIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDF 77 (118)
T ss_dssp CCCCCCCCCCCCCCC---CCSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSS
T ss_pred CcCCccccCCCEEEE---eeccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCC
Confidence 555665554444332 1234666643 3567889999999999999999999999999999886 44555666666
Q ss_pred eeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCC
Q psy8139 507 ISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPP 546 (1101)
Q Consensus 507 ~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p 546 (1101)
...|.|.++...|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 78 ~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 78 DTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEECCC
T ss_pred eEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 6789999999999999999999999988888889888765
No 371
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.22 E-value=1.6e-10 Score=120.24 Aligned_cols=130 Identities=11% Similarity=-0.087 Sum_probs=83.7
Q ss_pred CccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCCcccccc--------cccceeccccCCCCCC
Q psy8139 743 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRAL--------HDTTALEDEKPRNTNN 814 (1101)
Q Consensus 743 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p~~~~~~--------~~s~~~~~w~p~~~~~ 814 (1101)
....+.+.+|.+++.|.|+|.|.|..|.+.. . ..........++.||.++... .++.+.+.|.+|..
T Consensus 66 ~~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~s-~--~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-- 140 (215)
T 1cd9_B 66 NNCSIPRKNLLLYQYMAIWVQAENMLGSSES-P--KLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-- 140 (215)
T ss_dssp CEEEEEGGGCCTTSCEEEEEEEEETTEEEEC-C--CEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG--
T ss_pred cEEEECCcccccceEEEEEEEEECCCCCccC-c--cEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC--
Confidence 3456778899999999999999999998632 1 122223334678888877622 35667888977532
Q ss_pred ccccceeeeecCcchhHHHHhHhhhceeeEEeeeeccCCCCCCceeeee---ccccccCCCCCCCCCccCcccce--eec
Q psy8139 815 CDYESKRTFQSTSPMLAAFMLLMLFTFIETISSFRDKYVDNEDDYDIVE---TNEHTGTGAPSDNENESDYFPEK--TID 889 (1101)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Y~v~~r~~~~~~~~~~~~v~---~~~~~~~~~~~~l~~~~~~t~Y~--V~a 889 (1101)
.+...+ .|.|.|+....+..|...... ...+.+.+|. +++.|. |+|
T Consensus 141 ----------~~~~~l------------~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~-------p~t~Y~~~Vra 191 (215)
T 1cd9_B 141 ----------SEYMEQ------------ECELRYQPQLKGANWTLVFHLPSSKDQFELCGLH-------QAPVYTLQMRC 191 (215)
T ss_dssp ----------GTTSCE------------EEEEEEEESSTTCCCEEEEEEESCEEEEEECCCC-------SCSCEEEEEEE
T ss_pred ----------CCeEEE------------EEEEEEccCCCCCCcEEEecccCcceEEEEcCCC-------CCCEEEEEEEe
Confidence 111224 899999833335567653221 1334444454 999999 999
Q ss_pred cccccc------CceeecccCCC
Q psy8139 890 ESVYGY------DTIVYGYDSDD 906 (1101)
Q Consensus 890 ~n~~G~------~~~v~~~t~e~ 906 (1101)
.|..|. |..+...|.|+
T Consensus 192 ~~~~g~G~wS~wS~~~~~~T~e~ 214 (215)
T 1cd9_B 192 IRSSLPGFWSPWSPGLQLRPTMK 214 (215)
T ss_dssp EESSSCCCCCCCCCCEEECCCC-
T ss_pred eECCCCCCCcCCCCccceecCCC
Confidence 998542 66667777654
No 372
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.22 E-value=2.4e-11 Score=109.05 Aligned_cols=91 Identities=18% Similarity=0.242 Sum_probs=67.4
Q ss_pred CCCCcccCCCCCCCCceEEEEeeCCCC-CCCCCcceEEEEEEeCCCC---CceeecccccCccEEEEcCCCCCceEEEEE
Q psy8139 687 PGKPQLLPDSPSLDRDVFTIRWEPPEY-DGGSPVLGYLVEHRRTGSP---YWVRASPHMVEDTELMVSGLEPGWRYQFRI 762 (1101)
Q Consensus 687 p~~p~~~~~~~~~~~~si~l~W~pP~~-~~~~~i~~Y~V~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 762 (1101)
|+.++.......++++++.|+|++|.. ..++.|.||.|.|+..+.. .|...... +..++++|.+|.|++.|.|+|
T Consensus 4 P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~-~~~~~~~l~~L~p~t~Y~v~V 82 (102)
T 3n1f_C 4 PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVE-GSKQWHMIGHLQPETSYDIKM 82 (102)
T ss_dssp CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEE-TTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEc-CCceEEECCCCCCCCEEEEEE
Confidence 333333333346789999999999753 4667899999999987654 46543332 456789999999999999999
Q ss_pred EEEcCCccCCCCCCCC
Q psy8139 763 TAENVVGFSEPGPLSE 778 (1101)
Q Consensus 763 ~A~n~~G~g~~S~~s~ 778 (1101)
.|+|..|.|++|+...
T Consensus 83 ~A~n~~G~G~~S~~~~ 98 (102)
T 3n1f_C 83 QCFNEGGESEFSNVMI 98 (102)
T ss_dssp EEEETTEECCCCCCEE
T ss_pred EEECCCcCCCCCCCEE
Confidence 9999999999986543
No 373
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.22 E-value=6.8e-11 Score=121.78 Aligned_cols=122 Identities=13% Similarity=0.129 Sum_probs=90.1
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc-CCCeE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PTPKV 484 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~~v 484 (1101)
..|.|.+++..|+|.|+|.|.|... +..+.+.+. .+|.+...+. ..+.+|++++|.|.+.+. |.+.+
T Consensus 54 ~~L~i~~v~~~D~G~Y~C~a~n~~~-------s~~~~l~V~----~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v 121 (204)
T 3sgj_C 54 SSYFIDAATVDDSGEYRCQTQLSTL-------SDPVQLEVH----IGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKV 121 (204)
T ss_dssp SEEEESSCCGGGCEEEEEEETTSBC-------CCCEEEEEE----CSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEE
T ss_pred cEEEEecccccCCEEEEEEeCCCcc-------cccEEEEEe----cCceEecCCc-eeEeCCCcEEEEEEecCCCCCceE
Confidence 7899999999999999999976321 344566554 3455554444 678899999999999665 56789
Q ss_pred EEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCC-ceEEEEEEeeccCCc
Q psy8139 485 SWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAG-HSITKARLRLEAPPT 547 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g-~~~~s~~l~V~~~p~ 547 (1101)
.|+++|..+... .. ...|.|.++...|+|.|+|.|.|..+ ..+....|.|..+|.
T Consensus 122 ~W~k~g~~~~~~------~~--~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 122 TYLQNGKGRKYF------HH--NSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp EEEETTEEEEEE------EE--CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred EEEECCcEeecc------cC--CceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCC
Confidence 999999876421 11 23799999999999999999999543 344467788876553
No 374
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.21 E-value=1.3e-11 Score=114.07 Aligned_cols=71 Identities=18% Similarity=0.201 Sum_probs=54.6
Q ss_pred CcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEecCCCCCCCCC
Q psy8139 718 PVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAP 792 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~~~~~P~~~p 792 (1101)
.|.+|.|+|+..+...|..... ...+.++|.+|.|++.|.|+|+|.|..|.|++|....+.|.. ..|+.||
T Consensus 45 ~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~--~~P~~pp 115 (115)
T 1x5z_A 45 TIANYELVYKDGEHGEEQRITI--EPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ--SSGPSSG 115 (115)
T ss_dssp CCCEEEECBEESSSCCCBCCEE--CSSSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC--CCCCCCC
T ss_pred CccEEEEEEEeCCCCCceEEec--CCCcEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCC--CCCCCCC
Confidence 5889999998877666644333 466899999999999999999999999998887765544443 5555554
No 375
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=1.1e-10 Score=104.37 Aligned_cols=94 Identities=29% Similarity=0.476 Sum_probs=82.2
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEE-ecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIV-TDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~-~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
.+|.|...|.+..+..|+++.|.|.+.|.|.+.+.|+++|..+.....+.+. ..++...|.|.++...|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 5678888889999999999999999999999999999999998876665543 245667899999999999999999999
Q ss_pred CCCceEEEEEEeecc
Q psy8139 530 RAGHSITKARLRLEA 544 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~ 544 (1101)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999988888888764
No 376
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.21 E-value=1.3e-10 Score=107.35 Aligned_cols=100 Identities=29% Similarity=0.444 Sum_probs=86.9
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeec-CCcEEEEecC-CeeEEEEeecCCCCCEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFS-SRRQRIVTDN-DISTLIIHQAALMDEGEIKCTA 527 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~-~~~~~~~~~~-~~~~l~I~~l~~~d~g~Y~C~a 527 (1101)
..+|.|+..|.++.+..|++++|.|.+.|.|.+.+.|++++..+.. ..++.+...+ +..+|.|.++...|+|.|+|.|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 4678899999999999999999999999999999999999998874 4566665543 3458999999999999999999
Q ss_pred EeCCCceEEEEEEeeccCCccc
Q psy8139 528 TNRAGHSITKARLRLEAPPTIR 549 (1101)
Q Consensus 528 ~n~~g~~~~s~~l~V~~~p~~~ 549 (1101)
.|..|.....+.|.|..+|...
T Consensus 93 ~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp EETTEEEEEEEEEEEECCSCCC
T ss_pred EcCCCeEEEEEEEEEeCCCCCC
Confidence 9999999888999998877543
No 377
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.21 E-value=4.9e-11 Score=119.67 Aligned_cols=124 Identities=15% Similarity=0.156 Sum_probs=93.0
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEe-ccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVE-GIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~-g~p~~ 482 (1101)
....|.|.+++..|.|.|+|.+.|..+ +..+.+.+. .++.+.. +....+..|++++|.|.+. +.|.+
T Consensus 49 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~-------s~~~~l~V~----~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~ 116 (176)
T 1f2q_A 49 TNSSLNIVNAKFEDSGEYKCQHQQVNE-------SEPVYLEVF----SDWLLLQ-ASAEVVMEGQPLFLRCHGWRNWDVY 116 (176)
T ss_dssp CSSEEEECSCCGGGCEEEEEECTTSSC-------CCCEEEEEE----CSSEEEE-ESCSEEETTSCEEEEEEEGGGCCEE
T ss_pred CceEEEEeccceecCEEEEEEcCCccc-------cccEEEEEe----Ccceeec-CCcceeeCCCCEEEEEEecCCCCce
Confidence 357899999999999999999977443 233555554 2333333 3345788999999999994 66777
Q ss_pred eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCce-EEEEEEeeccCCc
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHS-ITKARLRLEAPPT 547 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~-~~s~~l~V~~~p~ 547 (1101)
.+.|+++|..+... .....|.|.++...|+|.|+|.|.|..+.. +..+.|.|..+|.
T Consensus 117 ~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 117 KVIYYKDGEALKYW--------YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEEEEETTEECCSC--------CCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred EEEEEECCEEEeee--------cCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 99999999887432 123489999999999999999999975443 3357888887764
No 378
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.21 E-value=3.5e-11 Score=110.84 Aligned_cols=85 Identities=18% Similarity=0.217 Sum_probs=66.5
Q ss_pred CCCCCCceEEEEeeCCC-CCCCCCcceEEEEEEeCCCC---CceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccC
Q psy8139 696 SPSLDRDVFTIRWEPPE-YDGGSPVLGYLVEHRRTGSP---YWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFS 771 (1101)
Q Consensus 696 ~~~~~~~si~l~W~pP~-~~~~~~i~~Y~V~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 771 (1101)
...++.++|.|+|++|. ...++.|.+|.|.|+..+.. .|.... .....++++|.+|.|++.|.|+|.|+|..|.|
T Consensus 17 ~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 95 (114)
T 1x4y_A 17 TDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDM-VEGDRYWHSISHLQPETSYDIKMQCFNEGGES 95 (114)
T ss_dssp EECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEE-EETTCCEEEECSCCTTCEEEEEEEEECTTCCC
T ss_pred EEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEe-cCCcEeEEEcCCCCCCCEEEEEEEEEcCCccC
Confidence 34678899999999986 35677899999999877654 332222 22556889999999999999999999999999
Q ss_pred CCCCCCCcEE
Q psy8139 772 EPGPLSEPLT 781 (1101)
Q Consensus 772 ~~S~~s~~~t 781 (1101)
++|....+.|
T Consensus 96 ~~S~~v~~~T 105 (114)
T 1x4y_A 96 EFSNVMICET 105 (114)
T ss_dssp CCCCCEEEEC
T ss_pred CCcCCEEEEe
Confidence 8877654444
No 379
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.21 E-value=1.1e-10 Score=118.14 Aligned_cols=116 Identities=17% Similarity=0.147 Sum_probs=92.1
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
..+|.|.+++..|+|.|+|.+.|..|. +.+.+.. ...+.+..+..|++++|.|.+.+.|.+.+
T Consensus 67 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~---------~~l~V~~--------~~~~~~~~v~~g~~~~l~C~~~~~p~~~v 129 (184)
T 2ny1_B 67 NFPLIIKNLKIEDSDTYICEVEDQKEE---------VQLLVFG--------LTANSDTHLLQGQSLTLTLESPPGSSPSV 129 (184)
T ss_dssp BCCEEECSCCGGGCEEEEEEETTEEEE---------EEEEEEE--------EEESSCSEEETTCCEEEEEECCTTCCCEE
T ss_pred eEEEEEecCCHHHCEEEEEEEEcCCCc---------EEEEEEE--------ecCCCCceeecCCCEEEEEEcCCCCCCEE
Confidence 345999999999999999999887541 3333321 11244557889999999999999999999
Q ss_pred EEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCc
Q psy8139 485 SWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPT 547 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~ 547 (1101)
.|++++..+. ... ..|.|.++...|+|.|+|.|.|..|.....+.|.|...|.
T Consensus 130 ~W~~~~~~~~--------~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 130 QCRSPRGKNI--------QGG--KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp EEECTTSCEE--------EES--SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred EEEeCCCccc--------cCc--eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 9999875441 122 3899999999999999999999999888888999887664
No 380
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.21 E-value=7.5e-11 Score=107.21 Aligned_cols=97 Identities=28% Similarity=0.462 Sum_probs=86.3
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.+...|.++.+..|+++.|.|.+.|.|.+.+.|++++..+....++.+...+....|.|.++...|+|.|+|.|.|
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 35788888889999999999999999999999999999999999877777777777777999999999999999999999
Q ss_pred CCCceEEEEEEeeccCC
Q psy8139 530 RAGHSITKARLRLEAPP 546 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p 546 (1101)
..|.....+.|.|..+|
T Consensus 91 ~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCcEEEEEEEEEEcCC
Confidence 99998888888887765
No 381
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.20 E-value=3.8e-11 Score=128.63 Aligned_cols=124 Identities=17% Similarity=0.134 Sum_probs=85.0
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc-CC-Ce
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PT-PK 483 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~-~~ 483 (1101)
.+|.|.++++.|+|.|+|.|.|..+... +....+.+.. +..+|.+...+....+..|..++|.|.+.|. |. +.
T Consensus 113 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~----~~~~~l~V~~-~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~ 187 (254)
T 2c1o_A 113 FTLKISRVEAEDLGIYYCVQGSHFPPTF----GAGTKLELKR-ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN 187 (254)
T ss_dssp EEEEESSCCGGGCSEEEEEECSSSSCEE----BCCEEEEECC-CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEECcCCcccCEEEEEEEEcCcceEe----cCCEEEEECC-CCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcE
Confidence 4799999999999999999998754321 1122344432 2346766654444444568899999999884 44 46
Q ss_pred EEEEECCEEeecCCc--EEEEecC-----CeeEEEEeecCCCCCEEEEEEEEeCCCce
Q psy8139 484 VSWYKDGFEIFSSRR--QRIVTDN-----DISTLIIHQAALMDEGEIKCTATNRAGHS 534 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~--~~~~~~~-----~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~ 534 (1101)
++|+++|..+..... ......+ ..+.|.|.++...|+|.|+|.|.|.....
T Consensus 188 v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 188 VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 999999987754411 1111111 13489999999999999999999987653
No 382
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=5.5e-11 Score=133.93 Aligned_cols=131 Identities=19% Similarity=0.203 Sum_probs=101.3
Q ss_pred cccceEEEcCccCCccE-EEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCC
Q psy8139 403 VEDTELMVSGLEPGWRY-QFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPT 481 (1101)
Q Consensus 403 ~~~~~l~i~~L~p~d~y-~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~ 481 (1101)
....+|.|.++++.|.| .|+|.|.|..|.... .+.+.+ ..+|.+ ....+..|+.++|.|.+.|.|.
T Consensus 209 ~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~-----~~~l~V----~~~P~i----~~~~~~~g~~v~l~C~~~g~P~ 275 (347)
T 2ifg_A 209 LPSLGLTLANVTSDLNRKNVTCWAENDVGRAEV-----SVQVNV----SFPASV----QLHTAVEMHHWCIPFSVDGQPA 275 (347)
T ss_dssp SSEEEEEEESCCSTTTTCCEEECCEETTEECCE-----EECCCC----BEEEEE----EECCCEESSSEEEEEEEEEESC
T ss_pred cccceEEEeeCChHHCCCeEEEEEEcCCCCEEE-----EEEEEE----cCCCee----eeccCccCceEEEEEEeeecCC
Confidence 34568999999999999 999999999876532 233322 234443 1122457899999999999999
Q ss_pred CeEEEEECCEEeecCCcEEEEec-------CCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCC
Q psy8139 482 PKVSWYKDGFEIFSSRRQRIVTD-------NDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPP 546 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~~~~~~~~~-------~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p 546 (1101)
|.++|+++|..+........... ...++|+|.++...|+|.|+|.|.|..|....++.|.|..+|
T Consensus 276 p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 276 PSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp CEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred CcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 99999999998876554433221 124579999999999999999999999999999999988765
No 383
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.20 E-value=3.5e-11 Score=109.45 Aligned_cols=88 Identities=25% Similarity=0.439 Sum_probs=70.6
Q ss_pred CCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEE
Q psy8139 684 PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRIT 763 (1101)
Q Consensus 684 ~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 763 (1101)
.+.|+.|.. .....+.+++.|+|++|. +.++.|.+|.|+|+..+...|..... ....++++|.+|.|++.|.|+|.
T Consensus 5 ~~~P~~p~~--~v~~~~~~sv~l~W~~p~-~~~g~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~ 80 (107)
T 2dn7_A 5 SSGPGRPTM--MISTTAMNTALLQWHPPK-ELPGELLGYRLQYCRADEARPNTIDF-GKDDQHFTVTGLHKGTTYIFRLA 80 (107)
T ss_dssp CCCCCCCEE--EEEECSTTEEEEEEECCS-SCSSCCCEEEEEEEETTCSSCEEEEE-ETTCCEEEEECCCTTCEEEEEEE
T ss_pred CCCCCCCcE--eEEecCCCEEEEEECCCC-CCCCceeEEEEEEEECCCCCCEEEEe-CCCccEEEeCCCCCCCEEEEEEE
Confidence 455666651 122348899999999987 55667999999999988878876543 26678999999999999999999
Q ss_pred EEcCCccCCCCC
Q psy8139 764 AENVVGFSEPGP 775 (1101)
Q Consensus 764 A~n~~G~g~~S~ 775 (1101)
|.|..|.|++|.
T Consensus 81 A~n~~G~g~~s~ 92 (107)
T 2dn7_A 81 AKNRAGLGEEFE 92 (107)
T ss_dssp EEETTEEEEEEE
T ss_pred EEcCCcccCCee
Confidence 999999988875
No 384
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=4.5e-11 Score=110.90 Aligned_cols=89 Identities=25% Similarity=0.429 Sum_probs=72.3
Q ss_pred CCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEE
Q psy8139 684 PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRIT 763 (1101)
Q Consensus 684 ~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 763 (1101)
.+.|++|..+ ....++.+++.|+|++|..+ ++|.+|.|+|+..+...|..+.......+.++|.+|.|++.|.|+|+
T Consensus 15 ~~~P~~P~~l-~~~~~~~~sv~l~W~~p~~~--g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 91 (118)
T 2yrz_A 15 AGVPDTPTRL-VFSALGPTSLRVSWQEPRCE--RPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVR 91 (118)
T ss_dssp CSCCCCCCCC-EECCCBTTEEEEECCCCCCS--SCEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEESCCTTCEEEEEEE
T ss_pred CCCCCCCCce-EEEeCCCCEEEEEeCCCCCC--CCccEEEEEEEECCCCceEEEEcCCCCcCEEEeCCCCCCCEEEEEEE
Confidence 4455555544 34467889999999998765 48999999999988777876655446689999999999999999999
Q ss_pred EEcCCccCCCCC
Q psy8139 764 AENVVGFSEPGP 775 (1101)
Q Consensus 764 A~n~~G~g~~S~ 775 (1101)
|.|..|.|++|.
T Consensus 92 A~n~~G~g~~S~ 103 (118)
T 2yrz_A 92 AQSQEGWGRERE 103 (118)
T ss_dssp EEESSCEEEEEE
T ss_pred EEcCCcCCCCcC
Confidence 999999988764
No 385
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.20 E-value=2.3e-10 Score=114.56 Aligned_cols=121 Identities=12% Similarity=0.136 Sum_probs=89.7
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC-
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP- 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~- 482 (1101)
....|.|.+++..|.|.|+|.|.|..+ +..+.+.+. .+|.+.. +....+.+|+.++|.|.+.+.|++
T Consensus 52 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~-------s~~~~l~V~----~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~ 119 (175)
T 1fnl_A 52 QASSYFIDAATVNDSGEYRCQTNLSTL-------SDPVQLEVH----IGWLLLQ-APRWVFKEEDPIHLRCHSWKNTALH 119 (175)
T ss_dssp SCSEEEESSCCGGGCEEEEEECSSSCC-------CCCEEEEEE----CSSEEEE-CSCSEEETTCCEEEEEEECTTCCCE
T ss_pred CceEEEEeCCCcccCEEEEEEeeCCcc-------cccEEEEEe----CCCceee-CCCceecCCCCEEEEEEcCCCCCce
Confidence 456899999999999999999987433 234566554 2333333 344678899999999999887665
Q ss_pred eEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCce-EEEEEEeecc
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHS-ITKARLRLEA 544 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~-~~s~~l~V~~ 544 (1101)
.+.|+++|..+... .. ...|.|.++...|+|.|+|.|.|..|.. +..+.|.|..
T Consensus 120 ~~~W~k~g~~~~~~------~~--~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 120 KVTYLQNGKDRKYF------HH--NSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp EEEEEETTEEEEEE------EE--CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEEEEECCeEccCC------CC--CCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 99999999877421 11 2379999999999999999999976643 3345666643
No 386
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=5.1e-11 Score=106.51 Aligned_cols=93 Identities=19% Similarity=0.324 Sum_probs=83.5
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.|...+.++.+.+|+++.|.|.+ .|.+.+.|+++|..+....++.+...+....|.|.++...|+|.|+|.|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 56788888999999999999999999 7889999999999998888888888887889999999999999999999997
Q ss_pred CCceEEEEEEeeccCCc
Q psy8139 531 AGHSITKARLRLEAPPT 547 (1101)
Q Consensus 531 ~g~~~~s~~l~V~~~p~ 547 (1101)
....++.|.|..+|.
T Consensus 84 --~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 84 --NVTLPAKVHVISGPS 98 (100)
T ss_dssp --CCCEEEEEEEECCSC
T ss_pred --CeeEEEEEEEeCCCC
Confidence 556778899988774
No 387
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.20 E-value=9.8e-11 Score=122.37 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=89.1
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVS 485 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~ 485 (1101)
.+|.|.+++..|+|.|+|.|.| .|.. +..+.+.+... +..|.. +....+..|+.++|.|.+.|.|.|.+.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~-~~~~-----~~~~~l~V~~~-~~~~~~---~~~~~~~~g~~v~L~C~~~g~P~p~i~ 149 (222)
T 3sbw_C 80 AALQITDVKLQDAGVYRCMISY-GGAD-----YKRITVKVNAP-YNKINQ---RILVVDPVTSEHELTCQAEGYPKAEVI 149 (222)
T ss_dssp EEEEESSCCGGGCEEEEEEEES-SSEE-----EEEEEEEEEBC-CCCCEE---EEEEEETTTTEEEEEEEEEEBSCCEEE
T ss_pred EEEEEcCcccccCeEEEEEEEe-CCCc-----eeEEEEEEECC-CCCCCc---eeeeeecCCCcEEEEEEecCCCCCeEE
Confidence 4799999999999999999998 3322 12344544421 222221 122357889999999999999999999
Q ss_pred EEEC-CEEeecCCcEEEEe--cCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCcc
Q psy8139 486 WYKD-GFEIFSSRRQRIVT--DNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTI 548 (1101)
Q Consensus 486 W~~~-g~~~~~~~~~~~~~--~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~ 548 (1101)
|+++ +..+.......... .+......+..+...|.|.|+|.|.|..|.....+.|.|..+|..
T Consensus 150 W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 215 (222)
T 3sbw_C 150 WTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLA 215 (222)
T ss_dssp EEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC---
T ss_pred EEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCccc
Confidence 9998 55554322221111 111112223345678999999999999999999999999876643
No 388
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.20 E-value=1.7e-11 Score=111.89 Aligned_cols=90 Identities=38% Similarity=0.731 Sum_probs=78.6
Q ss_pred CCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEE
Q psy8139 343 KPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFR 422 (1101)
Q Consensus 343 ~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~ 422 (1101)
.+|.+|+.|.+. .++.++++|+|.+|..+||.+|++|.|+++..+...|............+++.+|.+++.|.|+
T Consensus 9 ~~p~~P~~P~v~----~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~fr 84 (112)
T 1bpv_A 9 SPIDPPGKPVPL----NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFR 84 (112)
T ss_dssp CCCCCCCCCEEE----EEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEE
T ss_pred CCCCCCCCCEEE----EeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEE
Confidence 578999999984 6789999999999888899999999999998877789887644456688999999999999999
Q ss_pred EEEEecCCC-CCCCC
Q psy8139 423 ITAENVVGF-SEPGP 436 (1101)
Q Consensus 423 c~A~n~~G~-~~~s~ 436 (1101)
|.|.|..|. +.+|.
T Consensus 85 V~A~N~~G~~s~~S~ 99 (112)
T 1bpv_A 85 VIAKNAAGAISPPSE 99 (112)
T ss_dssp EEEECTTSCEEEEEE
T ss_pred EEEEECCCCCCCCCC
Confidence 999999996 87663
No 389
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.20 E-value=4.4e-11 Score=126.41 Aligned_cols=163 Identities=15% Similarity=0.207 Sum_probs=103.7
Q ss_pred EccCCeEEEEEEEecc---CCC-eEEEEECCEEeecCCc-EEEEecC----CeeEEEEeecCCCCCEEEEEEEEeCCCce
Q psy8139 464 ALEDEKVEFTVQVEGI---PTP-KVSWYKDGFEIFSSRR-QRIVTDN----DISTLIIHQAALMDEGEIKCTATNRAGHS 534 (1101)
Q Consensus 464 v~~g~~v~L~C~~~g~---p~~-~v~W~~~g~~~~~~~~-~~~~~~~----~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~ 534 (1101)
+..|++++|.|.+.|. |.+ .|+|++++..+..... ......+ ..+.|.|.++...|+|.|+|.+.|..|..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 6799999999999887 766 8999998865432100 0000011 23479999999999999999999988864
Q ss_pred EEEEEE----eeccCCccccCCCCCCCeEEeeCCEEEEEEEEee-cCC-CeeEEEECCeecCCCCceEE--Eeecc---e
Q psy8139 535 ITKARL----RLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPP-PTARWLHNGEPLTSGGRYEI--THTDR---Y 603 (1101)
Q Consensus 535 ~~s~~l----~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~-~~v~W~~~g~~l~~~~~~~~--~~~~~---~ 603 (1101)
.....+ .+..+|.+...+... ....|..+.|.|.+.| .|. +.+.|+++|..+........ ..++. .
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~---~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~ 185 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPK---EEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLY 185 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCG---GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEE
T ss_pred CcEEEEecCCCCCcCCEEEEECCCh---HHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEE
Confidence 332222 344456543322211 1123778999999998 454 58999999998754221111 11111 1
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 604 LNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 604 ~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
..+.|......+.|.|+|.|.|....
T Consensus 186 s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 186 SKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEChhhcCCCCEEEEEEECCCCC
Confidence 23444443334689999999998654
No 390
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.20 E-value=1.6e-10 Score=123.75 Aligned_cols=136 Identities=13% Similarity=0.070 Sum_probs=98.5
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC--
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP-- 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~-- 482 (1101)
..+|.|.++++.|+|.|.|.|.|..|.......+..+.+.+. .+|.+...|..+.+..|++++|.|.+.+.|.+
T Consensus 78 ~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~----~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 153 (256)
T 1nqb_A 78 TAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS----SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSN 153 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC----CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTT
T ss_pred EEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeec----ccccEEecCcEEEEecCCcEEEEeEecCcccccc
Confidence 357999999999999999999998763111111233455543 44667777888899999999999999988875
Q ss_pred ---eEEEEE--CCEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EEEEeecc
Q psy8139 483 ---KVSWYK--DGFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KARLRLEA 544 (1101)
Q Consensus 483 ---~v~W~~--~g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~~l~V~~ 544 (1101)
.+.|++ ++..+. ...++.........+|+|.++...|+|.|+|.|.|..+.... .+.|.|..
T Consensus 154 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 154 GNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp SCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred cceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 999999 554321 124555554556678999999999999999999986443222 35566654
No 391
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.19 E-value=1.6e-10 Score=103.32 Aligned_cols=93 Identities=30% Similarity=0.504 Sum_probs=84.7
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.+...|.+..+..|+++.|.|.+.|.|.+.+.|++++..+....++.+...++...|.|.++...|+|.|+|.|.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 56778888889999999999999999999999999999999998888888887777789999999999999999999999
Q ss_pred CCceEEEEEEeec
Q psy8139 531 AGHSITKARLRLE 543 (1101)
Q Consensus 531 ~g~~~~s~~l~V~ 543 (1101)
.|.....+.|.|.
T Consensus 85 ~g~~~~~~~l~V~ 97 (99)
T 3puc_A 85 AGSVSSSCKLTIK 97 (99)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEeEEEEEEEE
Confidence 9998888888775
No 392
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.19 E-value=1.5e-10 Score=119.07 Aligned_cols=130 Identities=14% Similarity=0.075 Sum_probs=93.4
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
..+|.|.+++..|+|.|+|.|.|..|.. +..+.+.+... ...|.+.. ..+..|+.+.|.|.+.|.|.|.+
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~-----~~~~~l~V~~~-~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v 135 (202)
T 3bp6_B 66 KALFHIPSVQVRDSGQYRCLVICGAAWD-----YKYLTVKVKAS-YMRIDTRI----LEVPGTGEVQLTCQARGYPLAEV 135 (202)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEE-----EEEEEEEEEBC-CCCEEEEE----EECTTTCCEEEEEEEEEBSCCEE
T ss_pred eeEEEECCCCHHHCcEEEEEEEeCCCcc-----eEEEEEEecCC-CCcccEEE----EecCCCCeEEEEEEccccCCceE
Confidence 3689999999999999999999987743 23355555422 22333221 24578999999999999999999
Q ss_pred EEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCC
Q psy8139 485 SWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPP 546 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p 546 (1101)
.|++++..+.. .......+....+.|.++...|.|.|+|.|.|..|.....+.|.|..+.
T Consensus 136 ~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 136 SWQNVSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRM 195 (202)
T ss_dssp EETTCCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC----
T ss_pred EEEeCCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCcC
Confidence 99997764431 1111122333567788999999999999999999999888888886543
No 393
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.19 E-value=9.8e-11 Score=107.18 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=71.7
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
.+|.+|.++.+..++.++|.|+|.+|...++. +. +.+
T Consensus 7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~-~~------------------------------------------~~~ 43 (113)
T 1x5j_A 7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQ-KI------------------------------------------TDS 43 (113)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECTTSCSSS-CC------------------------------------------CSS
T ss_pred CCCCCCcceEEEEecCCEEEEEecCCCCcccc-cc------------------------------------------CcC
Confidence 46788888888888888899888876543320 00 124
Q ss_pred ceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 720 LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 720 ~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
.+|.|.|+......+.... .....++++|.+|.|+|.|.|+|+|.|..|.|++|+...+.|..
T Consensus 44 ~~Y~v~y~~~~~~~~~~~~-~~~~~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~ 106 (113)
T 1x5j_A 44 RYYTVRWKTNIPANTKYKN-ANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 106 (113)
T ss_dssp CEEEEEECBSSSSSCCCEE-CCBCSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCC
T ss_pred ceEEEEEEECCCCCeEEEE-EecCcCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccC
Confidence 4788877763222222111 12567899999999999999999999999999998877766554
No 394
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.19 E-value=1.2e-10 Score=121.24 Aligned_cols=169 Identities=14% Similarity=0.143 Sum_probs=107.7
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeEEEEECC--EE---ee-------------cCCcEEEEec--CCeeEEEEeecC
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKVSWYKDG--FE---IF-------------SSRRQRIVTD--NDISTLIIHQAA 516 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g--~~---~~-------------~~~~~~~~~~--~~~~~l~I~~l~ 516 (1101)
|..+.+..|++++|.|.+.+.+ .+.+.|+++. .. +. ...++.+..+ ++..+|.|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 5567889999999999998865 4789999852 11 10 1245555432 345689999999
Q ss_pred CCCCEEEEEEEEeCCCc---eEEEEEEeecc----CCcccc-CCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEEECC
Q psy8139 517 LMDEGEIKCTATNRAGH---SITKARLRLEA----PPTIRL-PKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWLHNG 586 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g~---~~~s~~l~V~~----~p~~~~-~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~~~g 586 (1101)
..|+|.|.|.+.|..|. ....+.|.|.. +|.+.. ++.. .+..|..+.|.|.+.|. |.+ .+.|.++|
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~----~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 162 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGC----GDTTSSTVTLGCLVKGYFPEPVTVTWNSGA 162 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCS----SCCCCSSEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCCh----hhccCCcEEEEEEEeeeEcCCcEEEEccCC
Confidence 99999999999987532 12235677763 233321 1111 23568999999999987 777 99999988
Q ss_pred eecCCCCceEEEeecc-eEEEEEccCCCCCCeEEEEEEEeCCCCcee
Q psy8139 587 EPLTSGGRYEITHTDR-YLNLRISDARRADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 587 ~~l~~~~~~~~~~~~~-~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~ 632 (1101)
..+...........+. .....+......+ |.|+|.|.|..|....
T Consensus 163 ~~~~~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 163 LSSDVHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp TCCSCCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEE
T ss_pred ccCceEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccE
Confidence 6543211111111111 1111222333345 9999999999887543
No 395
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.19 E-value=7.4e-11 Score=110.49 Aligned_cols=97 Identities=21% Similarity=0.323 Sum_probs=76.6
Q ss_pred CCCCCceEEEEeeCCCCC-CC-----CC--cceEEEEEEeCCCC-CceeecccccCccEEEEcCCCCCceEEEEEEEEcC
Q psy8139 697 PSLDRDVFTIRWEPPEYD-GG-----SP--VLGYLVEHRRTGSP-YWVRASPHMVEDTELMVSGLEPGWRYQFRITAENV 767 (1101)
Q Consensus 697 ~~~~~~si~l~W~pP~~~-~~-----~~--i~~Y~V~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 767 (1101)
..++.++++|+|.+|... +| +. |..|.|.|...+.. .+..+.. +..++++|.+|.|+|.|.|+|+|.|.
T Consensus 27 ~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~~~--g~~ts~~v~~L~P~T~Y~~rV~A~n~ 104 (137)
T 1wk0_A 27 SDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYV--GEETNITLNDLKPAMDYHAKVQAEYN 104 (137)
T ss_dssp ESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEE--ESCSEEEECSCCTTCEECEEEEEEET
T ss_pred EEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEEEe--cCccEEEEcCCCCCCEEEEEEEEEeC
Confidence 367899999999998765 33 22 68999999876543 3333322 77899999999999999999999999
Q ss_pred CccCCCCCCCCcEEecCCCCCCCCCccc
Q psy8139 768 VGFSEPGPLSEPLTVTYQRSPAAAPSFI 795 (1101)
Q Consensus 768 ~G~g~~S~~s~~~t~~~~~~P~~~p~~~ 795 (1101)
.|.|++|....+.|....+.++.+|...
T Consensus 105 ~G~G~~S~~~~f~T~~~~P~~P~~p~l~ 132 (137)
T 1wk0_A 105 SIKGTPSEAEIFTTLSCEPDIPNPPRIS 132 (137)
T ss_dssp TEECCCCCCCCEECCCSSSCCCSCSCCC
T ss_pred CCcCCCCCCEEEECCCCCCCCCCCCEEe
Confidence 9999999999888877555566666554
No 396
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.18 E-value=1.7e-10 Score=124.60 Aligned_cols=191 Identities=10% Similarity=0.071 Sum_probs=115.1
Q ss_pred CCCCcccCCCCCC--CCCeeEEEEeCCCCCCCcCeeEEEEEEEecC-------CCceEEcCccccccceEEEcCccCCcc
Q psy8139 348 PGKPQLLPDSPSL--DRDVFTIRWEPPEYDGGSPVLGYLVEHRRTG-------SPYWVRASPHMVEDTELMVSGLEPGWR 418 (1101)
Q Consensus 348 P~~p~~l~~~~~~--~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~-------~~~w~~~~~~~~~~~~l~i~~L~p~d~ 418 (1101)
.+....|.|.... +.....+.|....... ......+.+.... .............+.+|.|.++++.|+
T Consensus 19 ~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 96 (268)
T 3mj6_A 19 VGESVLMGCVVQRTEEKHVDRVDWLFSKDKD--DASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADE 96 (268)
T ss_dssp TTCCEEECCBCCCSSCCCEEEEEEEEESSST--TCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGGC
T ss_pred cCCcEEEEEEeecCCCCceEEEEEEEeCCCC--CceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhHC
Confidence 3566677776221 4567889998852221 2222222222110 011111111123447899999999999
Q ss_pred EEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE---eccCCCeEEEEEC-CEEee
Q psy8139 419 YQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV---EGIPTPKVSWYKD-GFEIF 494 (1101)
Q Consensus 419 y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~---~g~p~~~v~W~~~-g~~~~ 494 (1101)
|.|+|.|.|..+.... +..+.+.+.+ ..|....+..|++++|.|.+ .+.|.+.+.|+++ +....
T Consensus 97 G~Y~C~~~~~~~~~~~---~~~~~l~V~~---------~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~ 164 (268)
T 3mj6_A 97 GIYTCEIRLKNESMVM---KKPVELWVLP---------EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTE 164 (268)
T ss_dssp EEEEEEEEETTCCCEE---EEEEEEEEEC---------CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSS
T ss_pred EEEEEEEEecCCcceE---EEEEEEEEec---------cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCc
Confidence 9999999997554321 2334444431 13446788999999999999 6779999999983 21100
Q ss_pred c-----------------C----CcEEEEe--cCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec-cCCcccc
Q psy8139 495 S-----------------S----RRQRIVT--DNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE-APPTIRL 550 (1101)
Q Consensus 495 ~-----------------~----~~~~~~~--~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~-~~p~~~~ 550 (1101)
. . .+..+.. ......|.|.++...|+|.|+|.|.|..|.....+.|.|. .+|.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~ 244 (268)
T 3mj6_A 165 EETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTI 244 (268)
T ss_dssp CEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC------
T ss_pred ceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCeeee
Confidence 0 0 0111110 1234589999999999999999999999988888888884 4554444
Q ss_pred CC
Q psy8139 551 PK 552 (1101)
Q Consensus 551 ~~ 552 (1101)
.|
T Consensus 245 ~p 246 (268)
T 3mj6_A 245 SP 246 (268)
T ss_dssp --
T ss_pred CC
Confidence 43
No 397
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.18 E-value=5.7e-11 Score=144.21 Aligned_cols=166 Identities=19% Similarity=0.261 Sum_probs=116.8
Q ss_pred ceeEEccCCeEEEEEEE-eccCCCeEEEEECCEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEE
Q psy8139 460 HDTTALEDEKVEFTVQV-EGIPTPKVSWYKDGFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCT 526 (1101)
Q Consensus 460 ~~~~v~~g~~v~L~C~~-~g~p~~~v~W~~~g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~ 526 (1101)
.++.+..|++++|.|.+ .+.|.+.++|++++..+. ...+..+...+ +|.|.+++..|+|.|+|.
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~ 450 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQ 450 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEE
Confidence 35678999999999999 888999999999764210 01233332222 799999999999999999
Q ss_pred EEeCCCce-EEEEEEeeccCCccccCCCCCCCeEEeeCC-EEEEEEEEee-cCCCeeEEEECCeecCCCC-ceEEEee--
Q psy8139 527 ATNRAGHS-ITKARLRLEAPPTIRLPKQYEDGLLFEMGE-IIKLKVSMAG-MPPPTARWLHNGEPLTSGG-RYEITHT-- 600 (1101)
Q Consensus 527 a~n~~g~~-~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~-~~~l~c~~~g-~p~~~v~W~~~g~~l~~~~-~~~~~~~-- 600 (1101)
+.|..|.. .....|.|..+|..+.... ....+..+. .+.|.|.+.+ .|.+.++|+++|.++.... .+.+...
T Consensus 451 ~~n~~~~~~~~~~~l~V~~~~~~p~i~~--~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~ 528 (581)
T 3o3u_N 451 AMNRNGKETKSNYRVRVYQIPGKPEIVD--SASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTR 528 (581)
T ss_dssp EECTTSCEEEEEEEEEEEBCCCCCEEES--CCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEE
T ss_pred EEcCCCceeEEEEEEEEEcCCCCCEEEc--CCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeE
Confidence 99999887 6678888877554321111 111344444 4567999998 5999999999999986432 2222111
Q ss_pred -----c---ceEEEEEccCC-CCCCeEEEEEEEeCCCCc
Q psy8139 601 -----D---RYLNLRISDAR-RADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 601 -----~---~~~sl~i~~l~-~~~~y~y~c~A~N~~G~~ 630 (1101)
+ ..++|.|..+. ..+.+.|+|.|.|..+..
T Consensus 529 ~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 529 RHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp ECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred EcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 0 13568898888 555889999999987643
No 398
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.18 E-value=2.3e-10 Score=121.91 Aligned_cols=136 Identities=10% Similarity=0.075 Sum_probs=97.3
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCC-----------CCCCeeeecCceeEEccCCeEEEE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSP-----------AAAPSFIRALHDTTALEDEKVEFT 473 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~-----------~~~P~~~~~p~~~~v~~g~~v~L~ 473 (1101)
..+|.|.++++.|+|.|+|.|.|..+.... +....+.+...+ ..+|.+...|..+.+.+|++++|.
T Consensus 80 ~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~ 156 (247)
T 2ghw_B 80 TLYLQMNSLRAEDTAVYYCARDRSYYLDYW---GQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLS 156 (247)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEEE---CCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEE
T ss_pred EEEEEECcCCHHHCEEEEEeeeccCCcccc---CCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEE
Confidence 357999999999999999999997322111 122345544321 235566677888889999999999
Q ss_pred EEEeccCCCeEEEEE--CCEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EE
Q psy8139 474 VQVEGIPTPKVSWYK--DGFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KA 538 (1101)
Q Consensus 474 C~~~g~p~~~v~W~~--~g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~ 538 (1101)
|.+.+.|.+.+.|++ ++..+. ...++.+...+...+|+|.++..+|+|.|+|.|.|..+.... .+
T Consensus 157 C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t 236 (247)
T 2ghw_B 157 CRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGT 236 (247)
T ss_dssp EEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCE
T ss_pred EEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCE
Confidence 999999999999999 443221 124555554556678999999999999999999986443322 34
Q ss_pred EEeec
Q psy8139 539 RLRLE 543 (1101)
Q Consensus 539 ~l~V~ 543 (1101)
.|.|.
T Consensus 237 ~l~V~ 241 (247)
T 2ghw_B 237 KVEVK 241 (247)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55554
No 399
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.18 E-value=4.9e-11 Score=125.56 Aligned_cols=176 Identities=11% Similarity=0.111 Sum_probs=112.5
Q ss_pred CCee-eecCceeEEccCCeEEEEEEEecc-CC-C-eEEEEECCEEe-ecCCcEEEEecCC----eeEEEEeecCCCCCEE
Q psy8139 452 APSF-IRALHDTTALEDEKVEFTVQVEGI-PT-P-KVSWYKDGFEI-FSSRRQRIVTDND----ISTLIIHQAALMDEGE 522 (1101)
Q Consensus 452 ~P~~-~~~p~~~~v~~g~~v~L~C~~~g~-p~-~-~v~W~~~g~~~-~~~~~~~~~~~~~----~~~l~I~~l~~~d~g~ 522 (1101)
+|.+ +..|....+..|++++|.|.+.|. |. + .++|+++|..+ ...........++ .+.|.|.++...|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 4444 345666667899999999999885 63 4 99999988766 3222111111111 2479999999999999
Q ss_pred EEEEEEeCCCceEEEEEEeec----cCCccccCCCCCCCeEEeeCCEEEEEEEEeec-C-CCeeEEEECCeecCCCCceE
Q psy8139 523 IKCTATNRAGHSITKARLRLE----APPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-P-PPTARWLHNGEPLTSGGRYE 596 (1101)
Q Consensus 523 Y~C~a~n~~g~~~~s~~l~V~----~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p-~~~v~W~~~g~~l~~~~~~~ 596 (1101)
|+|.|.|..+.......+.+. .+|.+...+.... . ..+..+.|.|.+.|. | .+.|.|+++|..+..+....
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~--~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 168 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPE--E-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVT 168 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGG--G-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEE
T ss_pred EEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHH--H-hccCceEEEEEEEeccCCCcEEEEEECCEECCCccccc
Confidence 999999987653333333321 3444322111100 0 124579999999985 4 47999999999886543111
Q ss_pred ---EE---------ee-cc---eEEEEEccCCCCCCeEEEEEEEeCCCCc
Q psy8139 597 ---IT---------HT-DR---YLNLRISDARRADRGEYQAHGVNSLGED 630 (1101)
Q Consensus 597 ---~~---------~~-~~---~~sl~i~~l~~~~~y~y~c~A~N~~G~~ 630 (1101)
.. .+ +. .+.|.|......+.|.|+|.|.|.....
T Consensus 169 ~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 169 TAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp CCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTSTT
T ss_pred CccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCCC
Confidence 11 11 11 2456777776677999999999987653
No 400
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.18 E-value=1.4e-10 Score=124.19 Aligned_cols=141 Identities=13% Similarity=0.065 Sum_probs=98.0
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEecc-----------CCCCCCeeeecCceeEEccCCeEEEE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR-----------SPAAAPSFIRALHDTTALEDEKVEFT 473 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~-----------~~~~~P~~~~~p~~~~v~~g~~v~L~ 473 (1101)
..+|.|.++++.|+|.|.|.|.|..+... +....+.+.. .+..+|.+...|....+.+|++++|.
T Consensus 79 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~ 154 (253)
T 3uzq_A 79 TAYLHLSSLTSGDTAVYYCSRGWEGFAYW----GQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATIS 154 (253)
T ss_dssp EEEEEECSCCGGGCEEEEEEECSSSCCEE----CCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEE
T ss_pred eEEEEeCCCCcccCEEEEEEEeeCCccEE----CCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEE
Confidence 34599999999999999999998544321 1224444442 12346777888888999999999999
Q ss_pred EEEeccCCC----eEEEEEC--CEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE
Q psy8139 474 VQVEGIPTP----KVSWYKD--GFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI 535 (1101)
Q Consensus 474 C~~~g~p~~----~v~W~~~--g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~ 535 (1101)
|.+.+.|.+ .+.|+++ +.... ...++.....+...+|+|.++..+|+|.|.|.|.|..+...
T Consensus 155 C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~f 234 (253)
T 3uzq_A 155 CRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTF 234 (253)
T ss_dssp EEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCB
T ss_pred EEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEE
Confidence 999998876 8999984 21111 12455555556667899999999999999999998765443
Q ss_pred E-EEEEeeccCCccc
Q psy8139 536 T-KARLRLEAPPTIR 549 (1101)
Q Consensus 536 ~-s~~l~V~~~p~~~ 549 (1101)
. .+.|.|...+.+.
T Consensus 235 g~gt~l~v~~~~~~~ 249 (253)
T 3uzq_A 235 GGGTKLEIKRPLEHH 249 (253)
T ss_dssp CCCEEEEECCC----
T ss_pred CCCEEEEEcCCCCCc
Confidence 3 3567777655443
No 401
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.18 E-value=2.5e-11 Score=112.85 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=52.7
Q ss_pred CceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCC
Q psy8139 701 RDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLS 777 (1101)
Q Consensus 701 ~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s 777 (1101)
.+++.|+|.+|.. .++.|.+|.|+|+..+...+..........++++|.+|.|++.|.|+|.|.|..|.|++|...
T Consensus 31 ~~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 31 DTSLKVSWQEPGE-KNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp SSEEEEECCCCTT-CCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEEEEEcCCCC-CCCcEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 3344444444432 334588888888877644332222223677899999999999999999999999998886543
No 402
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.18 E-value=4.9e-10 Score=117.05 Aligned_cols=137 Identities=12% Similarity=0.159 Sum_probs=93.7
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTPK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~~ 483 (1101)
..+|.|.+++..|+|.|+|.+.|... . +..+.+.+.. +..+|.+...+ ...+..|+.++|.|.+ .+.|.+.
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~~-~-----~~~~~l~V~~-~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~ 142 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQDF-D-----SAAVSLQVAA-PYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAE 142 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECCC-C-----CCCCCCCCCB-CCCCCEEECCC------CCSEEEEEEEEEEEBSCCE
T ss_pred eEEEEECCcccccCEEEEEEEEeCCC-c-----eEEEEEEEEc-CCCCCcEEeCC-CceecCCceEEEEEecccccCCCe
Confidence 56899999999999999999998532 2 1223333322 23446655444 3467789999999999 8899999
Q ss_pred EEEEE-CCEEeecCCcEEEEe--cCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeeccCCccc
Q psy8139 484 VSWYK-DGFEIFSSRRQRIVT--DNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLEAPPTIR 549 (1101)
Q Consensus 484 v~W~~-~g~~~~~~~~~~~~~--~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~~~p~~~ 549 (1101)
+.|++ ++..+.......... .+....|.|.++...|.|.|+|.|.|..|....++.|.|..+|...
T Consensus 143 v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 211 (222)
T 4i0k_A 143 VFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTF 211 (222)
T ss_dssp EEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-----
T ss_pred EEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcccc
Confidence 99998 454443322222221 2223458899999999999999999999999999999999877543
No 403
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.18 E-value=4.8e-11 Score=123.31 Aligned_cols=160 Identities=19% Similarity=0.279 Sum_probs=96.7
Q ss_pred ccCCeEEEEEEEeccC----CCeEEEEECCEEeecCCc-EEEEecCCeeEEEEee---cCCCC---CEEEEEEEEeCCCc
Q psy8139 465 LEDEKVEFTVQVEGIP----TPKVSWYKDGFEIFSSRR-QRIVTDNDISTLIIHQ---AALMD---EGEIKCTATNRAGH 533 (1101)
Q Consensus 465 ~~g~~v~L~C~~~g~p----~~~v~W~~~g~~~~~~~~-~~~~~~~~~~~l~I~~---l~~~d---~g~Y~C~a~n~~g~ 533 (1101)
..|++++|.|.+.|.+ .+.|+|++++..+..... ......++ .+.+.. +...| +|.|+|.|.|..+.
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g--~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~ 93 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNS--TYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 93 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTS--CEEEEEEEECCHHHHHTTCCEEEEEECTTSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCC--cEEEEEEEEEEHHHccCCceEEEEEEcCcCC
Confidence 6899999999998875 349999999987653210 01111222 233322 33444 99999999998876
Q ss_pred eEEEEEE----eeccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCeecCCCCceEEEee-cc----
Q psy8139 534 SITKARL----RLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGEPLTSGGRYEITHT-DR---- 602 (1101)
Q Consensus 534 ~~~s~~l----~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~~l~~~~~~~~~~~-~~---- 602 (1101)
......+ .+..+|.+...+.... ...|..+.|.|.+.|. |. +.+.|+++|..+........... ++
T Consensus 94 ~~~~~~v~~~~~~~~~P~v~~~~~~~~---~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~ 170 (207)
T 1l6x_A 94 APIEKTISKAKGQPREPQVYTLPPSRD---ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL 170 (207)
T ss_dssp SCEEEEECCCCSCCBCCEEEEECCCGG---GGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEE
T ss_pred cceEEEeccCCCCCcCCEEEEECCChH---HhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEE
Confidence 5333333 3344555432221110 1235669999999985 44 49999999988753211111111 11
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~ 629 (1101)
...+.|......+.|.|+|.|.|....
T Consensus 171 ~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 171 YSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 123444444445689999999998654
No 404
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.18 E-value=7.4e-12 Score=129.49 Aligned_cols=125 Identities=18% Similarity=0.267 Sum_probs=92.4
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCCeE
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTPKV 484 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~~v 484 (1101)
..|.|.++++.|.|.|+|.|.|..|.... +..+.+.+. .+|.+...+....+..|+.+.|.|.+ .+.|.+.+
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~---~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v 140 (209)
T 1nbq_A 68 TGITFKSVTREDTGTYTCMVSEEGGNSYG---EVKVKLIVL----VPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEY 140 (209)
T ss_dssp TEEECSCCCTTSCSEEEEEEEETTSSCEE---CCEEECCEE----BCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEE
T ss_pred cEEEEeeCCHHHCcEEEEEEecCCCCccc---eEEEEEEEe----cCCcCCCcccccceecCCEEEEEEeCCCCCCCcee
Confidence 78999999999999999999998763221 233444443 33444333445668899999999997 89999999
Q ss_pred EEEECCEEeecCCcE-------EEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEE
Q psy8139 485 SWYKDGFEIFSSRRQ-------RIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITK 537 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~-------~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s 537 (1101)
.|++++..+...... ........+.|.|.++...|.|.|+|.|.|..|....+
T Consensus 141 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 200 (209)
T 1nbq_A 141 TWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTS 200 (209)
T ss_dssp EEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEEC
T ss_pred EEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccccc
Confidence 999999877643221 11111233589999999999999999999999987443
No 405
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=1.1e-10 Score=107.63 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=43.8
Q ss_pred CCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCC
Q psy8139 717 SPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGP 775 (1101)
Q Consensus 717 ~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 775 (1101)
+.|.+|.|.|+.... |..........++++|.+|.|++.|.|+|.|.|..|.|+++.
T Consensus 45 g~i~gY~i~y~~~~~--~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~ 101 (116)
T 2edb_A 45 IVVRGYIIGYGVGSP--YAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLY 101 (116)
T ss_dssp BCCCEEEEEEEESST--TSEEEEEETTCCEEEECSCCSSSBEEEEEEEEETTEECSCEE
T ss_pred CceeEEEEEEEeCCC--CeEEEEeCCCeeEEEeCCCCCCCEEEEEEEEEeCCccCCCCc
Confidence 457888888876432 222222236778999999999999999999999999988754
No 406
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.18 E-value=8.5e-11 Score=140.22 Aligned_cols=72 Identities=36% Similarity=0.598 Sum_probs=63.3
Q ss_pred CCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEec
Q psy8139 710 PPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 710 pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~~ 783 (1101)
+|..+||++|++|.|+++..++..|..+.. ...+.+++.+|.||+.|.|||.|.|.+|.|+||+.+..+++.
T Consensus 32 ~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~--~~~t~~~V~~L~~g~~Y~FRV~A~N~~G~s~PS~~s~~v~~~ 103 (573)
T 3uto_A 32 PPALDGGSLVTNYTIEKREAMGGSWSPCAK--SRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIP 103 (573)
T ss_dssp CCSCCSSSCCCEEEEEEEESSSCCCEEEEE--ESSSEEEECCCCTTCEEEEEEEEEETTEECCCCCCCCCEECC
T ss_pred CCCcCCCCcccEEEEEEEECCCCceEEecc--ccCCEEEeCCCCCCCcEeEEEEEEcCceEcCCcCCCCCEEcC
Confidence 344556678999999999999999999876 567899999999999999999999999999999999888775
No 407
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=6.1e-11 Score=110.79 Aligned_cols=85 Identities=13% Similarity=0.187 Sum_probs=66.2
Q ss_pred CCCCCceEEEEeeCCCCC-CCCCcceEEEEEEeCCCCCcee---ec-ccccCccEEEEcCCCCCceEEEEEEEEcCCccC
Q psy8139 697 PSLDRDVFTIRWEPPEYD-GGSPVLGYLVEHRRTGSPYWVR---AS-PHMVEDTELMVSGLEPGWRYQFRITAENVVGFS 771 (1101)
Q Consensus 697 ~~~~~~si~l~W~pP~~~-~~~~i~~Y~V~~~~~~~~~~~~---~~-~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 771 (1101)
...+.+++.|+|++|..+ .++.|.+|.|.|+..+...|.. .. ....+.++++|.+|.|++.|.|+|.|.|..|.|
T Consensus 25 ~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 104 (122)
T 1va9_A 25 QPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTG 104 (122)
T ss_dssp EECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEEEEETTEEC
T ss_pred EeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCCCCCEEEEEEEEEcCCCCC
Confidence 356789999999998753 5677999999999887654422 21 122456899999999999999999999999998
Q ss_pred CCCCCCCcEE
Q psy8139 772 EPGPLSEPLT 781 (1101)
Q Consensus 772 ~~S~~s~~~t 781 (1101)
++|....+.|
T Consensus 105 ~~S~~~~~~T 114 (122)
T 1va9_A 105 PSSSEINATT 114 (122)
T ss_dssp CCCCCEECCC
T ss_pred CCccCEEEEe
Confidence 8876654443
No 408
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=1.6e-10 Score=106.37 Aligned_cols=86 Identities=14% Similarity=0.188 Sum_probs=69.5
Q ss_pred CCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCC----CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccC
Q psy8139 696 SPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGS----PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFS 771 (1101)
Q Consensus 696 ~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~----~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 771 (1101)
+..+++++|.|+|+++ ..++.|.+|.|.|++.+. ..|.......+..++++|.+|.|+|.|.|+|.|+|..|.|
T Consensus 24 ~~a~sstsi~vsW~~~--~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~G 101 (120)
T 1ujt_A 24 PVVLTPTTVQVTWTVD--RQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQG 101 (120)
T ss_dssp CCCCBTTEEEEEEEES--SCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCC
T ss_pred cEEccCceEEEEEccC--CCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCccC
Confidence 4457889999999974 345679999999998865 4676544434667899999999999999999999999999
Q ss_pred CCCCCCCcEEec
Q psy8139 772 EPGPLSEPLTVT 783 (1101)
Q Consensus 772 ~~S~~s~~~t~~ 783 (1101)
++|+...+.|..
T Consensus 102 p~S~~v~~~T~e 113 (120)
T 1ujt_A 102 MDSESKTVRTTE 113 (120)
T ss_dssp CCCCCEEEEECS
T ss_pred CCCCCEEEECCC
Confidence 998766555543
No 409
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=6.1e-11 Score=111.24 Aligned_cols=86 Identities=26% Similarity=0.321 Sum_probs=62.5
Q ss_pred CCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcc
Q psy8139 641 RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVL 720 (1101)
Q Consensus 641 ~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~ 720 (1101)
.|++|.++.+...+ +++.|+|++|...+ +.|.
T Consensus 27 ~P~~P~~l~~~~~~-~sv~l~W~~P~~~~-----------------------------------------------g~i~ 58 (126)
T 1x5i_A 27 VPEVPSSLHVRPLV-TSIVVSWTPPENQN-----------------------------------------------IVVR 58 (126)
T ss_dssp CCCSCSEEEEEEET-TEEEEEEECCSCTT-----------------------------------------------BCCC
T ss_pred CCCCCCeeEEEecC-CEEEEEEcCCCCCC-----------------------------------------------CCEe
Confidence 57777788777775 77777777664333 3477
Q ss_pred eEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCC
Q psy8139 721 GYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPL 776 (1101)
Q Consensus 721 ~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 776 (1101)
+|.|+|+. +...+.... .....++++|.+|.|++.|.|+|.|+|..|.|+++..
T Consensus 59 ~Y~v~y~~-~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~ 112 (126)
T 1x5i_A 59 GYAIGYGI-GSPHAQTIK-VDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYE 112 (126)
T ss_dssp EEEEEECS-SCGGGEEEE-CCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCC
T ss_pred EEEEEEEc-CCCCceEEE-eCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceee
Confidence 77777763 222222222 2367789999999999999999999999999988753
No 410
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.17 E-value=5.1e-10 Score=115.17 Aligned_cols=132 Identities=15% Similarity=0.136 Sum_probs=92.0
Q ss_pred eEEEEEccCCCCCCeEEEEEEEeCCCCceeE-EEEEE--ecCCCCCCccEEEEe-cCCeEEEEeecCCCCCCcccceeEE
Q psy8139 603 YLNLRISDARRADRGEYQAHGVNSLGEDVAS-FLVTV--TDRPLPPGKAKVVMT-LGKSVTLSWSEPEDDGGCKIGNYIV 678 (1101)
Q Consensus 603 ~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s-~~l~v--~~~P~~P~~~~~~~~-~~~sv~lsW~~p~~~~g~~i~~Y~v 678 (1101)
.....|..+.....|.+.+.|.|..|...+. ..+.+ ...|.||.++.+... ..+++.|+|++|..
T Consensus 68 ~~~C~~~~~~~~~~Y~~~V~a~N~~G~~~s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~----------- 136 (206)
T 3v6o_A 68 FYECIFQPIFLLSGYTMWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVF----------- 136 (206)
T ss_dssp CEEEEECSCCTTSCEEEEEEEC---CCEECCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC----------------
T ss_pred CceEEeCcHHhcccEEEEEEEEcCCccccCCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCC-----------
Confidence 4567788888889999999999999976432 22221 246899999887655 46777888876531
Q ss_pred EEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCC-CCCceeecccccCccEEEEcCCCCCce
Q psy8139 679 EYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTG-SPYWVRASPHMVEDTELMVSGLEPGWR 757 (1101)
Q Consensus 679 ~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~t~ 757 (1101)
. ..++.|.|.|+..+ ...|............+.|.+|.|++.
T Consensus 137 -----------------------------------~--~~~l~yev~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~ 179 (206)
T 3v6o_A 137 -----------------------------------P--ENNLQFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAV 179 (206)
T ss_dssp ----------------------------------------CEEEEEEEEESSSSCCCEEEEECC---CEEEECCSCTTSC
T ss_pred -----------------------------------C--CCcEEEEEEEEECCCCCceEEEecccCcceeEEeecCCCCCE
Confidence 1 12578999999876 457877654323335789999999999
Q ss_pred EEEEEEEEcCCccCCCCCCCCcEEe
Q psy8139 758 YQFRITAENVVGFSEPGPLSEPLTV 782 (1101)
Q Consensus 758 Y~~~V~A~n~~G~g~~S~~s~~~t~ 782 (1101)
|.|+|+|.+..|.|.+|++|....+
T Consensus 180 Y~vqVRa~~~~~~G~WSeWS~~~~~ 204 (206)
T 3v6o_A 180 YAVQVRCKRLDGLGYWSNWSNPAYT 204 (206)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEC
T ss_pred EEEEEEEecCCCCCcCCCCCcceEe
Confidence 9999999999999999999987654
No 411
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.17 E-value=2.3e-10 Score=105.36 Aligned_cols=101 Identities=25% Similarity=0.366 Sum_probs=87.2
Q ss_pred CCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEEEE
Q psy8139 545 PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAHGV 624 (1101)
Q Consensus 545 ~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~ 624 (1101)
+|.+...+ ..+.+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+........|.|.++...|.|.|+|.|.
T Consensus 7 pp~i~~~~---~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (114)
T 2cqv_A 7 GPQIIQFP---EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVE 83 (114)
T ss_dssp CCEESCCC---CSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEE
T ss_pred CCEEEeCC---CCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEE
Confidence 45554433 356889999999999999999999999999999987777877766668899999999999999999999
Q ss_pred eCCCCceeEEEEEEecCCCCCCcc
Q psy8139 625 NSLGEDVASFLVTVTDRPLPPGKA 648 (1101)
Q Consensus 625 N~~G~~~~s~~l~v~~~P~~P~~~ 648 (1101)
|..|.......|.|...|.+|..+
T Consensus 84 N~~g~~~~~~~l~V~~~p~~P~~p 107 (114)
T 2cqv_A 84 NKLGSRQAQVNLTVVDKPDPPAGT 107 (114)
T ss_dssp CSSCEEECCEEEEEECSCSCCCCC
T ss_pred ECCCcEEEEEEEEEECCCCCCCCC
Confidence 999998889999999988888654
No 412
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=1.4e-10 Score=106.72 Aligned_cols=78 Identities=18% Similarity=0.247 Sum_probs=54.0
Q ss_pred ceEEEEeeCCCCCCCCCcceEEEEEEeCCC---CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCC
Q psy8139 702 DVFTIRWEPPEYDGGSPVLGYLVEHRRTGS---PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSE 778 (1101)
Q Consensus 702 ~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~---~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~ 778 (1101)
+++.|+|.+|.. .+++|.+|.|+|+..+. ..|..... ....++++|.+|.|++.|.|+|+|.|..|.|++|....
T Consensus 25 ~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~ 102 (114)
T 2ede_A 25 RAVIVSWQPPLE-ANGKITAYILFYTLDKNIPIDDWIMETI-SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPIL 102 (114)
T ss_dssp SCEEEEEECCSS-CSSCCSEEEEEEESCSSSCTTTSEEEEE-ETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEE
T ss_pred CEEEEEECCCCC-CCCceeEEEEEEEeCCCCCccceEEEEE-CCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEE
Confidence 444444444432 23357788888876433 24543332 26778999999999999999999999999988876655
Q ss_pred cEE
Q psy8139 779 PLT 781 (1101)
Q Consensus 779 ~~t 781 (1101)
+.|
T Consensus 103 ~~T 105 (114)
T 2ede_A 103 FRT 105 (114)
T ss_dssp EEC
T ss_pred EEe
Confidence 443
No 413
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.17 E-value=1.3e-10 Score=106.64 Aligned_cols=97 Identities=19% Similarity=0.254 Sum_probs=79.6
Q ss_pred ccceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCC---CcC-eeEEEEEEEecCCCceEEcCccccccceEE
Q psy8139 334 GTDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDG---GSP-VLGYLVEHRRTGSPYWVRASPHMVEDTELM 409 (1101)
Q Consensus 334 s~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g---~~~-i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~ 409 (1101)
++-+.+.+..+|++|.+|.+ ..++.++|+|+|.+|.++| +.+ |++|.|+........|..+.. ...++++
T Consensus 5 ~~~~~~~~~~pp~~P~~p~v----~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~--~~~t~~~ 78 (120)
T 1wfu_A 5 SSGMEPHKVVPLSKPHPPVV----GKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYT--GYATRHV 78 (120)
T ss_dssp CCCCCCTTCCCCCCCCCCBC----CCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEE--ESCSEEE
T ss_pred cccEEEEeeCCCCCCCCcee----ceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEec--CCccEEE
Confidence 34467888999999999986 4788999999999998776 666 999999955445667876543 2356799
Q ss_pred EcCccCCccEEEEEEEEecCCCCCCCC
Q psy8139 410 VSGLEPGWRYQFRITAENVVGFSEPGP 436 (1101)
Q Consensus 410 i~~L~p~d~y~y~c~A~n~~G~~~~s~ 436 (1101)
|.+|.|++.|.|+|.|.|..|.+.+|.
T Consensus 79 v~gL~p~t~Y~frV~A~n~~G~s~~S~ 105 (120)
T 1wfu_A 79 VEGLEPRTLYKFRLKVTSPSGEYEYSP 105 (120)
T ss_dssp EESCCTTCEEEEEEEEECSSSCEEECC
T ss_pred ECCCCCCCEEEEEEEEECCCCCCCCCc
Confidence 999999999999999999999887663
No 414
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=7.6e-11 Score=108.01 Aligned_cols=82 Identities=23% Similarity=0.336 Sum_probs=61.3
Q ss_pred CCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCC
Q psy8139 698 SLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLS 777 (1101)
Q Consensus 698 ~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s 777 (1101)
..+.+++.|+|++|.. .+++|.+|.|+|+..+...+.... .....+.++|.+|.|++.|.|+|+|.|..|.|++|...
T Consensus 21 ~~~~~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 98 (111)
T 1x5l_A 21 RAGQTSVSLLWQEPEQ-PNGIILEYEIKYYEKDKEMQSYST-LKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAM 98 (111)
T ss_dssp CBCSSCEEEEECCCSC-CCSCCCEEEEEEEESSSCCSSCEE-EEESSSEEEECSCCTTCEEEECEEEEETTEECCCCCCE
T ss_pred EcCCCEEEEEECCCCC-CCCEEEEEEEEEEECCCCceeEEE-ecCCCCEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccE
Confidence 4566777777777744 345689999999887643322211 12567899999999999999999999999999888765
Q ss_pred CcEE
Q psy8139 778 EPLT 781 (1101)
Q Consensus 778 ~~~t 781 (1101)
.+.|
T Consensus 99 ~~~T 102 (111)
T 1x5l_A 99 EVET 102 (111)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5544
No 415
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.17 E-value=1.9e-10 Score=101.15 Aligned_cols=90 Identities=22% Similarity=0.339 Sum_probs=78.1
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.|...+.++.+.+|++++|.|.+.+ |.+.+.|+++|..+..+.++.+...+....|.|.++..+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 46788889999999999999999999987 45789999999999888888888888788999999999999999999976
Q ss_pred CCCceEEEEEEeecc
Q psy8139 530 RAGHSITKARLRLEA 544 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~ 544 (1101)
. ..++.|.|..
T Consensus 82 ~----~~sa~L~V~~ 92 (93)
T 1waa_A 82 T----KSAANLKVKE 92 (93)
T ss_dssp E----EEEEEEEEEC
T ss_pred C----cEEEEEEEEc
Confidence 3 4567777754
No 416
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=99.16 E-value=1.7e-10 Score=103.62 Aligned_cols=86 Identities=23% Similarity=0.249 Sum_probs=65.0
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
..|++|.++.+..++.+++.|+|.+|... ++.|
T Consensus 6 t~~~~P~~l~v~~~t~~Sv~lsW~~p~~~-----------------------------------------------~g~i 38 (103)
T 3t04_D 6 SVSSVPTKLEVVDATPTSLKISWDAYYSS-----------------------------------------------WQNV 38 (103)
T ss_dssp CCCCCCCSCEEEEEETTEEEEECTTTTTT-----------------------------------------------SCCC
T ss_pred ccCCCCceeEEEecCCCEEEEEccCCCCC-----------------------------------------------CCcc
Confidence 35788888888888888888888866432 2457
Q ss_pred ceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcC--CccCC
Q psy8139 720 LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENV--VGFSE 772 (1101)
Q Consensus 720 ~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~--~G~g~ 772 (1101)
.+|.|.|...+...+........+.++++|.+|.|++.|.|+|.|.|. .|.|+
T Consensus 39 ~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~~~~~G~~~ 93 (103)
T 3t04_D 39 KYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAYDTFFPGYEP 93 (103)
T ss_dssp CEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEESCCCTTCCC
T ss_pred ceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeCCCCCCCC
Confidence 888888887654322222223367899999999999999999999999 99877
No 417
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.16 E-value=4.5e-11 Score=124.16 Aligned_cols=132 Identities=18% Similarity=0.225 Sum_probs=94.8
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc-CC-
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PT- 481 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~- 481 (1101)
...+|.|.++++.|+|.|+|.|.|..|... ..+..+.+.+...+..+|.+...+....+..|+.++|.|.+.|. |+
T Consensus 68 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~--~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~ 145 (213)
T 3mj8_L 68 NMATLTISKAQAGDEADYYCQSWDGTNSAW--VFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPAD 145 (213)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTTTEE--EEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSC
T ss_pred CEEEEEECCCChhhCEEEEEEeccCCccee--EEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCC
Confidence 345799999999999999999999877210 11233556665555577888777766666789999999999985 33
Q ss_pred CeEEEEECCEEeecCCcE--EEEecC---CeeEEEEeecCCCCCEEEEEEEEeCCCceEEE
Q psy8139 482 PKVSWYKDGFEIFSSRRQ--RIVTDN---DISTLIIHQAALMDEGEIKCTATNRAGHSITK 537 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~~~~--~~~~~~---~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s 537 (1101)
+.++|+++|..+...... .....+ ..+.|.|.++...|.|.|+|.|.|..+....+
T Consensus 146 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 206 (213)
T 3mj8_L 146 VAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKS 206 (213)
T ss_dssp CEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEE
T ss_pred eEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEee
Confidence 489999999988642100 000111 12368999999999999999999988655443
No 418
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.16 E-value=8.4e-10 Score=117.98 Aligned_cols=172 Identities=15% Similarity=0.162 Sum_probs=108.4
Q ss_pred eecCceeEEccCCeEEEEEEEeccCCCeEEEEEC--CEE---ee------------cCC-cEEEEecCCeeEEEEeecCC
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKD--GFE---IF------------SSR-RQRIVTDNDISTLIIHQAAL 517 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~---~~------------~~~-~~~~~~~~~~~~l~I~~l~~ 517 (1101)
...|..+.+..|++++|.|.+.+.+.+.+.|++. +.. +. ... ++.+...+... |.|.+++.
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~ 83 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANM 83 (253)
T ss_dssp EEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESC
T ss_pred EeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCCh
Confidence 3456778899999999999998888899999982 110 10 011 44444443333 99999999
Q ss_pred CCCEEEEEEEEeCCC---c---eEEEEEEeeccCCccccCCCCC----CCeEEeeCCEEEEEEEEee-cCCC-eeEEEEC
Q psy8139 518 MDEGEIKCTATNRAG---H---SITKARLRLEAPPTIRLPKQYE----DGLLFEMGEIIKLKVSMAG-MPPP-TARWLHN 585 (1101)
Q Consensus 518 ~d~g~Y~C~a~n~~g---~---~~~s~~l~V~~~p~~~~~~~~~----~~~~v~~g~~~~l~c~~~g-~p~~-~v~W~~~ 585 (1101)
+|+|.|.|.+.+..+ . ......|.|........+|... ....+..|..+.|.|.+.| .|.+ .++|.++
T Consensus 84 ~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~ 163 (253)
T 3to4_D 84 SQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 163 (253)
T ss_dssp SSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEEC
Confidence 999999999987654 1 1123456665322111111100 0001113689999999998 5666 8999999
Q ss_pred CeecCCCCceEEEe-------ecc----eEEEEEccCCCCC-CeEEEEEEEeCCC
Q psy8139 586 GEPLTSGGRYEITH-------TDR----YLNLRISDARRAD-RGEYQAHGVNSLG 628 (1101)
Q Consensus 586 g~~l~~~~~~~~~~-------~~~----~~sl~i~~l~~~~-~y~y~c~A~N~~G 628 (1101)
|..+..+....... .++ .+.|.|......+ .+.|+|.|.|..-
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l 218 (253)
T 3to4_D 164 GKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (253)
T ss_dssp TEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred CEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCC
Confidence 98886432111000 011 2456676666555 7799999998753
No 419
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.15 E-value=4.8e-10 Score=117.86 Aligned_cols=120 Identities=16% Similarity=0.246 Sum_probs=89.5
Q ss_pred cceEEEcCccCCccEEEEEEEEecC-CCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeE-EEEEEE-eccCC
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVV-GFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKV-EFTVQV-EGIPT 481 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~-G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v-~L~C~~-~g~p~ 481 (1101)
++.|.|.+++..|+|.|+|.|.|.. |.. +..+.+.+... +..|.+...+....+..|+.+ .|.|.+ .+.|.
T Consensus 76 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~-----~~~~~l~V~~~-p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~ 149 (231)
T 2pet_A 76 QGRLVLAEAQVGDERDYVCVVRAGAAGTA-----EATARLNVFAK-PEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPA 149 (231)
T ss_dssp TCCEEESSCCGGGCEEEEEEEECGGGCEE-----EEEEEEEEEBC-CCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSC
T ss_pred CceEEEcccCcccCceEEEEEEecCCCce-----EEEEEEEEEec-CCCcEEecCCcceeecCCCceEEEEEEeECcccC
Confidence 3559999999999999999999986 332 23345555432 344777777777778899988 999999 89999
Q ss_pred CeEEEEECCEEeecCC----cEEEEec----C-C----eeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 482 PKVSWYKDGFEIFSSR----RQRIVTD----N-D----ISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~~----~~~~~~~----~-~----~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
|.+.|++++..+.... ++.+... . + .+.|.|......|.|.|+|.|.|.
T Consensus 150 p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 150 PKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 9999999999887554 4433321 1 1 146888755566799999999995
No 420
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.15 E-value=3.9e-11 Score=113.91 Aligned_cols=99 Identities=18% Similarity=0.286 Sum_probs=75.0
Q ss_pred CCCCCCcccCCCCCCCCceEEEEeeCCCCC-CCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEE
Q psy8139 685 GPPGKPQLLPDSPSLDRDVFTIRWEPPEYD-GGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRIT 763 (1101)
Q Consensus 685 ~~p~~p~~~~~~~~~~~~si~l~W~pP~~~-~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 763 (1101)
+.|+.++........+.+++.|+|.+|..+ .++.|.+|.|+|+..+...|..........++++|.+|.|++.|.|+|+
T Consensus 16 ~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 95 (132)
T 1x5h_A 16 DVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVA 95 (132)
T ss_dssp SSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEEEECCCSSCEEEEECE
T ss_pred CCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEEEeCCCccEEEeCCCCCCCEEEEEEE
Confidence 444433322233457889999999998764 5677999999999887655554433446789999999999999999999
Q ss_pred EEcCCccCCCCCCCCcEEec
Q psy8139 764 AENVVGFSEPGPLSEPLTVT 783 (1101)
Q Consensus 764 A~n~~G~g~~S~~s~~~t~~ 783 (1101)
|.|..|.|++|....+.|..
T Consensus 96 A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 96 ALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp EEETTEEEEECCCEEEECCS
T ss_pred EEcCCccCCCCcCEEeEcCc
Confidence 99999999888766555543
No 421
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.15 E-value=3.5e-10 Score=123.11 Aligned_cols=139 Identities=15% Similarity=0.107 Sum_probs=96.8
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCC-----------CCCCeeeecCceeEEccCCeEEEE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSP-----------AAAPSFIRALHDTTALEDEKVEFT 473 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~-----------~~~P~~~~~p~~~~v~~g~~v~L~ 473 (1101)
..+|.|.++++.|+|.|.|.+.|..|.......+..+.+.+...+ ..+|.+...|..+.+.+|++++|.
T Consensus 104 ~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~ 183 (282)
T 1qok_A 104 TAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTIT 183 (282)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEE
T ss_pred eEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEE
Confidence 357999999999999999999998762111111122344444332 134566677888899999999999
Q ss_pred EEEeccCCCeEEEEE--CCEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE-EEE
Q psy8139 474 VQVEGIPTPKVSWYK--DGFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI-TKA 538 (1101)
Q Consensus 474 C~~~g~p~~~v~W~~--~g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~-~s~ 538 (1101)
|.+.+.| +.+.|++ +|..+. ...++.....+...+|+|.++...|+|.|+|.|.|..+... ..+
T Consensus 184 C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt 262 (282)
T 1qok_A 184 CSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGT 262 (282)
T ss_dssp EEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCE
T ss_pred EEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCE
Confidence 9999999 8999999 554321 12455555455667899999999999999999987543222 235
Q ss_pred EEeecc
Q psy8139 539 RLRLEA 544 (1101)
Q Consensus 539 ~l~V~~ 544 (1101)
.|.|..
T Consensus 263 ~l~V~~ 268 (282)
T 1qok_A 263 KLELKR 268 (282)
T ss_dssp EEEEC-
T ss_pred EEEEec
Confidence 566653
No 422
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.15 E-value=5.5e-10 Score=114.68 Aligned_cols=123 Identities=12% Similarity=0.107 Sum_probs=88.3
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
....|.|.++++.|+|.|+|.|.|..+....+..+..+.+.+... ..+|.+...|. ..+.+|++++|.|.+.+ +.+.
T Consensus 61 ~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~-~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~ 137 (201)
T 1nkr_A 61 SKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGL-YEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDM 137 (201)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECS-SCCCEEEEESC-SEECTTCEEEEEEEESS-CCSE
T ss_pred ceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeecc-CCCCceecCCC-CccCCCCeEEEEEeCCC-CCce
Confidence 346799999999999999999987643222333455666666532 35677776665 47899999999999986 5678
Q ss_pred EEEEECCEEeecCCcEEEEecC-CeeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDN-DISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~-~~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
+.|+++|..+...........+ ....|.|.++. |+|.|+|.|.+..
T Consensus 138 ~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 138 YHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred EEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 9999998765432111111121 24589999998 9999999998763
No 423
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.15 E-value=3.3e-10 Score=116.35 Aligned_cols=131 Identities=10% Similarity=0.116 Sum_probs=88.2
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEe-ccCCC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVE-GIPTP 482 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~-g~p~~ 482 (1101)
...+|.|.++++.|+|.|+|.|.|..|..........+.+.+... ...|.+... ....|+.+.|.|.+. |.|.|
T Consensus 63 ~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~-~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p 137 (201)
T 1dr9_A 63 NNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKAD-FPTPSISDF----EIPTSNIRRIICSTSGGFPEP 137 (201)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECC-CCCCEEEEE----ECSSTTEEEEEEEEEEESSCE
T ss_pred CCcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCC-CCCCceEec----cCCCCCeEEEEEecCCccCCC
Confidence 346899999999999999999999876543211123355555432 223443321 124588999999994 99999
Q ss_pred eEEEEECCEEeecCCcEEEEecC-Ce-eEEEEeecCCCCCEEEEEEEEeCCCceEEEEE
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDN-DI-STLIIHQAALMDEGEIKCTATNRAGHSITKAR 539 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~-~~-~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~ 539 (1101)
.|+|+++|..+............ +. ....+..+...|.|.|+|.|.|..|..+....
T Consensus 138 ~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 138 HLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp EEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred EEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 99999999887654322222222 22 12234556678999999999999987766543
No 424
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.15 E-value=2.7e-10 Score=101.99 Aligned_cols=94 Identities=23% Similarity=0.356 Sum_probs=82.0
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEee--cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIF--SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTA 527 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~--~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a 527 (1101)
..||.+...|..+.+..|+++.|.|.+.|.|.|.+.|++++..+. ...++.+...+....|.|.++...|+|.|+|.|
T Consensus 3 ~~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEE
Confidence 356777778888999999999999999999999999999999886 345777777767779999999999999999999
Q ss_pred EeCCCceEEEEEEeec
Q psy8139 528 TNRAGHSITKARLRLE 543 (1101)
Q Consensus 528 ~n~~g~~~~s~~l~V~ 543 (1101)
.|..|.....+.|.|.
T Consensus 83 ~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 83 GNEFGSDSATVNIHIR 98 (100)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEEEE
Confidence 9999998878777775
No 425
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.14 E-value=7.3e-10 Score=112.66 Aligned_cols=158 Identities=14% Similarity=0.189 Sum_probs=112.1
Q ss_pred cCceeEEccCCeEEEEEEEe-ccC---CCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 458 ALHDTTALEDEKVEFTVQVE-GIP---TPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~-g~p---~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
.|....+..|+.++|.|.+. |.| +..++|+++|..+.. ....|.+..+...++|.|+|.+.+..|.
T Consensus 8 ~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG----------aT~tLti~s~t~sdSG~YqCvVTDa~Gc 77 (304)
T 3shs_A 8 QSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN----------NTATLTVADATSENAGSYKVTVQDTDTM 77 (304)
T ss_dssp EESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC----------CSSEEEESSCCGGGCEEEEEEEEETTTC
T ss_pred CCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC----------CcceEEeeeccccCCeEEEEEEEECCCC
Confidence 35555678999999999876 456 457999999987642 2338999999999999999999998887
Q ss_pred eEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEE--ee-cC-----CCeeEEEECCeecCCCCceEEEeecceEE
Q psy8139 534 SITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSM--AG-MP-----PPTARWLHNGEPLTSGGRYEITHTDRYLN 605 (1101)
Q Consensus 534 ~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~--~g-~p-----~~~v~W~~~g~~l~~~~~~~~~~~~~~~s 605 (1101)
...+..+.|..++.+......+..+.+..+..+.|.+.+ .| .| ..++.|++++..+.. ..+
T Consensus 78 s~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg-----------Aq~ 146 (304)
T 3shs_A 78 TSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT-----------TQD 146 (304)
T ss_dssp CEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES-----------SSE
T ss_pred eeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC-----------ccc
Confidence 766554444443322111122334455567788888877 43 33 469999999976643 335
Q ss_pred EEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 606 LRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 606 l~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
+++..+...+.|.|+|.+.|..|....+...
T Consensus 147 lT~sS~TateaG~YtV~VTn~~~~c~~s~~~ 177 (304)
T 3shs_A 147 ITIQEFTADKNGVYTVKVWGESEDSAASAST 177 (304)
T ss_dssp EEECSCCGGGCEEEEEEEESSSGGGCEEEEE
T ss_pred cceeeEEecCCeEEEEEEEcCCCCcccccce
Confidence 6677788889999999999998865444433
No 426
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.14 E-value=8.6e-10 Score=116.65 Aligned_cols=171 Identities=17% Similarity=0.231 Sum_probs=107.5
Q ss_pred eecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--E-E--ee------------cCCcEEEEe-cCCeeEEEEeecCC
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--F-E--IF------------SSRRQRIVT-DNDISTLIIHQAAL 517 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~-~--~~------------~~~~~~~~~-~~~~~~l~I~~l~~ 517 (1101)
...|..+.+..|++++|.|.+. .+.+.+.|++.+ . . +. ...++.+.. .++..+|.|.++..
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred ccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 4457788899999999999985 467899999853 1 1 10 123444443 24456899999999
Q ss_pred CCCEEEEEEEEeCCC---ce--EEEEEEeecc------CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CCC-eeEEEE
Q psy8139 518 MDEGEIKCTATNRAG---HS--ITKARLRLEA------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PPP-TARWLH 584 (1101)
Q Consensus 518 ~d~g~Y~C~a~n~~g---~~--~~s~~l~V~~------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~~-~v~W~~ 584 (1101)
.|+|.|.|.+.|..+ .. .....|.|.. +|.+...+. ....+..|..+.|.|.+.|. |.+ .+.|++
T Consensus 82 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~--~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~ 159 (238)
T 1bec_A 82 SQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEP--SKAEIANKQKATLVCLARGFFPDHVELSWWV 159 (238)
T ss_dssp GGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECC--CSTTCSSSCSCSEEEEEEEEBSCCEEEEEEE
T ss_pred ccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECC--ChHHcccCCceEEEEEEeeEeCCCcEEEEEE
Confidence 999999999998742 11 1234567764 333322110 01123458889999999986 654 999999
Q ss_pred CCeecCCCCceE---EEeecce----EEEEEccCCCC-CCeEEEEEEEeCCCC
Q psy8139 585 NGEPLTSGGRYE---ITHTDRY----LNLRISDARRA-DRGEYQAHGVNSLGE 629 (1101)
Q Consensus 585 ~g~~l~~~~~~~---~~~~~~~----~sl~i~~l~~~-~~y~y~c~A~N~~G~ 629 (1101)
+|..+..+.... ....++. ..|.|...... +.+.|+|.|.|....
T Consensus 160 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 212 (238)
T 1bec_A 160 NGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLS 212 (238)
T ss_dssp TTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCC
T ss_pred CCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCC
Confidence 998886543211 1111111 12333322222 367899999997543
No 427
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.14 E-value=1.2e-10 Score=124.79 Aligned_cols=143 Identities=15% Similarity=0.056 Sum_probs=98.5
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCC----CCCCCcceEEEeccCCC-----------CCCeeeecCceeEEccCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSE----PGPLSEPLTVTYQRSPA-----------AAPSFIRALHDTTALEDEK 469 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~----~s~~s~~vtv~~~~~~~-----------~~P~~~~~p~~~~v~~g~~ 469 (1101)
..+|.|.++++.|+|.|.|.|.|..|.+. ....+....+.+...+. .++.+...|..+.+.+|++
T Consensus 77 ~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~ 156 (257)
T 1f3r_B 77 QVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDR 156 (257)
T ss_dssp EEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCC
T ss_pred EEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCC
Confidence 35899999999999999999999865211 00011223455443221 1234455677788999999
Q ss_pred EEEEEEEeccCCCeEEEEE--CCEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE
Q psy8139 470 VEFTVQVEGIPTPKVSWYK--DGFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI 535 (1101)
Q Consensus 470 v~L~C~~~g~p~~~v~W~~--~g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~ 535 (1101)
++|.|.+.+.|.+.+.|++ +|..+. ...++.+...+...+|+|.++...|+|.|.|.|.|......
T Consensus 157 v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g 236 (257)
T 1f3r_B 157 VTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFG 236 (257)
T ss_dssp EEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEEC
T ss_pred EEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeEC
Confidence 9999999999888999999 543221 12455554445567899999999999999999999751111
Q ss_pred EEEEEeeccCCc
Q psy8139 536 TKARLRLEAPPT 547 (1101)
Q Consensus 536 ~s~~l~V~~~p~ 547 (1101)
..+.|.|...+.
T Consensus 237 ~gt~l~V~~~~~ 248 (257)
T 1f3r_B 237 AGTKLELKAAEQ 248 (257)
T ss_dssp CCCEECCSSSCC
T ss_pred CCEEEEEeCCCc
Confidence 235677765543
No 428
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.14 E-value=1.7e-10 Score=103.27 Aligned_cols=95 Identities=29% Similarity=0.527 Sum_probs=80.3
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcE-EEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQ-RIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~-~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
.+|.|...|.++.+..|++++|.|.+.|.|.+.+.|++++..+...... .....++...|.|.++...|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 4677777788899999999999999999999999999999988765432 333345557899999999999999999999
Q ss_pred CCCceEEEEEEeeccC
Q psy8139 530 RAGHSITKARLRLEAP 545 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~ 545 (1101)
..|....++.|.|...
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999888888888653
No 429
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.14 E-value=3.3e-10 Score=101.17 Aligned_cols=85 Identities=25% Similarity=0.495 Sum_probs=75.1
Q ss_pred CCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCC--ceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeE
Q psy8139 556 DGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGG--RYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVAS 633 (1101)
Q Consensus 556 ~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s 633 (1101)
..+.+..|+.+.|.|.+.|.|.|.+.|+++|..+.... ++.+...++..+|.|.++...|.|.|+|.|.|..|..+.+
T Consensus 13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~ 92 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSAT 92 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEE
Confidence 35678899999999999999999999999999987543 5677777778899999999999999999999999998888
Q ss_pred EEEEEec
Q psy8139 634 FLVTVTD 640 (1101)
Q Consensus 634 ~~l~v~~ 640 (1101)
+.|.|..
T Consensus 93 ~~l~V~~ 99 (100)
T 3knb_A 93 VNIHIRS 99 (100)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 8888864
No 430
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.14 E-value=4.8e-10 Score=120.13 Aligned_cols=141 Identities=12% Similarity=0.063 Sum_probs=98.8
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccC------------CCCCCeeeecCceeEEccCCeEEE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS------------PAAAPSFIRALHDTTALEDEKVEF 472 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~------------~~~~P~~~~~p~~~~v~~g~~v~L 472 (1101)
..+|.|.++++.|+|.|.|.|.|..+... ...+....+.+... ...+|.+...|..+.+.+|++++|
T Consensus 80 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~-~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L 158 (256)
T 3umt_A 80 TAYLELRSLTSEDSAVYYCARDDRYPAWF-AYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSI 158 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCSTTCCS-CEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEE
T ss_pred EEEEEECCCCcccCEEEEEEEccCCCccc-cEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEE
Confidence 34699999999999999999998732111 11122344555431 113677788888899999999999
Q ss_pred EEEEeccCCCeEEEEEC--CEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-E
Q psy8139 473 TVQVEGIPTPKVSWYKD--GFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-K 537 (1101)
Q Consensus 473 ~C~~~g~p~~~v~W~~~--g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s 537 (1101)
.|.+.+.|.+.+.|++. +.... ...++.....+...+|+|.++...|+|.|.|.|.|..+.... .
T Consensus 159 ~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~g 238 (256)
T 3umt_A 159 TCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGG 238 (256)
T ss_dssp EEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCC
T ss_pred EEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCC
Confidence 99999999899999983 22111 124566555666778999999999999999999986544332 3
Q ss_pred EEEeeccCC
Q psy8139 538 ARLRLEAPP 546 (1101)
Q Consensus 538 ~~l~V~~~p 546 (1101)
+.|.|..++
T Consensus 239 t~L~V~~~~ 247 (256)
T 3umt_A 239 TKLEIKRAA 247 (256)
T ss_dssp EEEEEC---
T ss_pred EEEEEECCC
Confidence 567776544
No 431
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.14 E-value=7e-10 Score=117.29 Aligned_cols=132 Identities=12% Similarity=0.133 Sum_probs=95.8
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCe
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPK 483 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~ 483 (1101)
....|.|.+++..|+|.|+|.+.|..+.+. .+..+.+.+... ..+|.+...| ...+.+|++++|.|.+.+. .+.
T Consensus 58 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~---~S~~~~L~V~~~-~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~ 131 (242)
T 1p6f_A 58 NKVKFYIPDMNSRMAGQYSCIYRVGELWSE---PSNLLDLVVTEM-YDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSM 131 (242)
T ss_dssp CEEEEEECSCCGGGCEEEEEEEEETTEECC---CCCCEEEEEECC-SCCCEEEEES-CSEEETTCEEEEEEECTTS-CSE
T ss_pred ceeEEEecCCCcccCeEEEEEEecCCcccc---CCcceEEEeecc-cCCCceEccC-CCccCCCCcEEEEEecCCC-CCE
Confidence 456899999999999999999988654332 345666666532 3467776655 4568899999999998765 458
Q ss_pred EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCC---ceEEEEEEeeccC
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAG---HSITKARLRLEAP 545 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g---~~~~s~~l~V~~~ 545 (1101)
+.|+++|..+.. ..........|.|.++...|+|.|+|.|.|... ..+....|.|..+
T Consensus 132 ~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 132 FLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp EEEEECSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred EEEEECCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEecc
Confidence 999999865543 112334556999999999999999999998641 2233466777653
No 432
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.14 E-value=1.5e-10 Score=102.16 Aligned_cols=90 Identities=14% Similarity=0.241 Sum_probs=75.9
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--EEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--FEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
+|.|...+.++.+..|+.+.|.|.+.|.|.|.+.|++++ ..+.... ..........|.|.++...|+|.|+|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 577777788889999999999999999999999999999 7775443 233345567899999999999999999999
Q ss_pred CCCceEEEEEEeec
Q psy8139 530 RAGHSITKARLRLE 543 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~ 543 (1101)
..|....++.|.|+
T Consensus 80 ~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 80 ELGEDEAIFEVIVQ 93 (93)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEC
Confidence 99988887777763
No 433
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.14 E-value=2.9e-10 Score=101.56 Aligned_cols=94 Identities=29% Similarity=0.453 Sum_probs=80.4
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCc-EEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRR-QRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~-~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
.+|.+...|.+..+..|+++.|.|.+.|.|.+.+.|++++..+..... +.....++...|.|.++...|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 467788888888999999999999999999999999999998876543 4444455566899999999999999999999
Q ss_pred CCCceEEEEEEeecc
Q psy8139 530 RAGHSITKARLRLEA 544 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~ 544 (1101)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999988888887753
No 434
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=1.3e-10 Score=104.92 Aligned_cols=57 Identities=19% Similarity=0.031 Sum_probs=45.0
Q ss_pred CcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCC
Q psy8139 718 PVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGP 775 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 775 (1101)
.|.+|+|.|...++..+..+.. .++.++++|.+|.|++.|.|+|.|+|..|.|+++.
T Consensus 34 ~i~~Y~I~y~~~~~~~~~~~~v-~~~~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~ 90 (108)
T 2ee3_A 34 PVRLVRVTYVSSEGGHSGQTEA-PGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLT 90 (108)
T ss_dssp CCSEEEEEEEETTTCCBCCEEE-ETTCCEEEECSCCSSCEEEEEEEEECTTSCEEEEE
T ss_pred CccEEEEEEEeCCCCceeEEEc-CCCcCEEEcCCCCCCCEEEEEEEEEeCCCcCCCcc
Confidence 4788888888776544433322 35778999999999999999999999999988763
No 435
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.13 E-value=4.2e-10 Score=116.79 Aligned_cols=132 Identities=12% Similarity=0.093 Sum_probs=94.8
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCCeE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKV 484 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v 484 (1101)
+.+|.|.+++..|+|.|.|.+.+..+..... ...+.+. ..++.....+....+..|..+.+.|.+.|.|.|.|
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i 150 (218)
T 4frw_A 78 DGSVLLRNAVQADEGEYECRVSTFPAGSFQA----RLRLRVL---VPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSV 150 (218)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEEETTEEEEE----EEEEEEE---BCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEE
T ss_pred eEEEEEeeccHHHCCceeEEEEeccCceeee----EEEEEEe---eeccceeeeeeeeeeeeccccceeeeccCCcCceE
Confidence 4579999999999999999999876643221 1222221 12333344556667788999999999999999999
Q ss_pred EEEECCEEeecCCcEEEEe-cCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 485 SWYKDGFEIFSSRRQRIVT-DNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 485 ~W~~~g~~~~~~~~~~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
+|++++..+.......... ....+.|.|.++...|.|.|+|.|.|..|.......+.|.
T Consensus 151 ~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 151 TWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred EEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 9999987665432211100 0113479999999999999999999999987776655554
No 436
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.13 E-value=1.5e-10 Score=106.05 Aligned_cols=99 Identities=36% Similarity=0.614 Sum_probs=80.9
Q ss_pred CCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEE
Q psy8139 344 PPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRI 423 (1101)
Q Consensus 344 ~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c 423 (1101)
++.+|++|..+.+. .++.++++|+|.+|..+|+.+|.+|.|+++..+...|...........++++.+|.+++.|.|+|
T Consensus 5 p~~~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV 83 (111)
T 1x5y_A 5 SSGPTSAPQHLTVE-DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRV 83 (111)
T ss_dssp CCSCCCCCEEEEEE-EECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEE
T ss_pred CCCCCcCCCCCEEE-eccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEE
Confidence 45566666655444 67889999999999888887899999999988878898876554567889999999999999999
Q ss_pred EEEecCCCCCCCCCCcceEE
Q psy8139 424 TAENVVGFSEPGPLSEPLTV 443 (1101)
Q Consensus 424 ~A~n~~G~~~~s~~s~~vtv 443 (1101)
.|.|..|.+.++..+..+++
T Consensus 84 ~A~n~~G~s~~S~~~~~v~~ 103 (111)
T 1x5y_A 84 VGVNIAGRSEPATLLQPVTI 103 (111)
T ss_dssp EEEETTEECCCCCCSSCBCC
T ss_pred EEEcCCcCCCCccCCCCEEe
Confidence 99999999888766554443
No 437
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.13 E-value=4e-10 Score=118.45 Aligned_cols=173 Identities=12% Similarity=0.122 Sum_probs=110.1
Q ss_pred eecCceeEEccCCeEEEEEEEecc--CCCeEEEEECC--E---Eee-------------cCCcEEEEecC--CeeEEEEe
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGI--PTPKVSWYKDG--F---EIF-------------SSRRQRIVTDN--DISTLIIH 513 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~--p~~~v~W~~~g--~---~~~-------------~~~~~~~~~~~--~~~~l~I~ 513 (1101)
...|..+.+..|++++|.|.+.+. +.+.+.|++.. . .+. ...++.+.... +..+|.|.
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (230)
T 1ypz_F 5 EQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIY 84 (230)
T ss_dssp ECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEEC
T ss_pred cccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEEC
Confidence 345677889999999999999875 56789999842 1 110 12445554322 45689999
Q ss_pred ecCCCCCEEEEEEEEeCC--Cc--eEEEEEEeecc---------CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-C
Q psy8139 514 QAALMDEGEIKCTATNRA--GH--SITKARLRLEA---------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-P 578 (1101)
Q Consensus 514 ~l~~~d~g~Y~C~a~n~~--g~--~~~s~~l~V~~---------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~ 578 (1101)
++..+|+|.|.|.+.+.. .. ......|.|.. +|.....+ +....+..|..++|.|.+.|. |. +
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~--p~~~~v~~g~~~~L~C~~~g~~P~~~ 162 (230)
T 1ypz_F 85 SLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFL--PSVAETNLHKTGTYLCLLEAFFPDVI 162 (230)
T ss_dssp SCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEEC--CCHHHHHHHSCEEEEEEEEEESSCCC
T ss_pred cCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEEC--CCchhhccCCcceEEEEEeeecCCCe
Confidence 999999999999998851 11 11234677752 12211100 011122357889999999986 64 6
Q ss_pred eeEEEE-CCeecCCCCceEEEeecc----eEEEEEccCCCCCCeEEEEEEEeCCCCcee
Q psy8139 579 TARWLH-NGEPLTSGGRYEITHTDR----YLNLRISDARRADRGEYQAHGVNSLGEDVA 632 (1101)
Q Consensus 579 ~v~W~~-~g~~l~~~~~~~~~~~~~----~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~ 632 (1101)
.|.|.+ +|..+.......+...++ .+.|.|..... .+.|+|.|.|..+....
T Consensus 163 ~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~--~~~ytC~v~~~~~~~~~ 219 (230)
T 1ypz_F 163 RVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM--GKEHRCIVKHENNKGGA 219 (230)
T ss_dssp EEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT--TSCEEEEEECSSCTTTS
T ss_pred EEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC--CCEEEEEEEECCCCCce
Confidence 999999 777664321111111111 34678877765 49999999998775433
No 438
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.13 E-value=6.9e-10 Score=98.69 Aligned_cols=89 Identities=18% Similarity=0.391 Sum_probs=79.6
Q ss_pred eecCceeEEccCCeEEEEEEEecc-CCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCce
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGI-PTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHS 534 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~-p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~ 534 (1101)
...|.++.+..|+++.|.|.+.|. |.+.+.|++++..+....++.+...++...|.|.++...|+|.|+|.|.|..|..
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 84 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGED 84 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred eccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeE
Confidence 445678889999999999999997 9999999999999988888887667777899999999999999999999999999
Q ss_pred EEEEEEeecc
Q psy8139 535 ITKARLRLEA 544 (1101)
Q Consensus 535 ~~s~~l~V~~ 544 (1101)
...+.|.|..
T Consensus 85 ~~~~~l~V~~ 94 (97)
T 2bk8_A 85 SSYAELFVKG 94 (97)
T ss_dssp EEEEEEEETT
T ss_pred eEEEEEEEEe
Confidence 8888888864
No 439
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=99.12 E-value=1e-10 Score=104.53 Aligned_cols=57 Identities=32% Similarity=0.426 Sum_probs=43.9
Q ss_pred CcceEEEEEEeCCCC-CceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCC
Q psy8139 718 PVLGYLVEHRRTGSP-YWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGP 775 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 775 (1101)
+|.+|.|.|+..+.. .+.... .....++++|.+|.|++.|.|+|.|.|..|.|+++.
T Consensus 28 ~i~~Y~v~y~~~~~~~~~~~~~-~~~~~t~~~i~~L~p~t~Y~~~V~A~n~~g~s~p~~ 85 (100)
T 3b83_A 28 PIEGILVTFGRKNDPSDETTVD-LTSSITSLTLTNLEPNTTYEIRIVARNGQQYSPPVS 85 (100)
T ss_dssp CCSEEEEEEEESSCTTTCEEEE-ECTTEEEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred cCCEEEEEEEECCCCCCceEEE-ECCcceEEEECCCCCCCEEEEEEEEEeCCCCCCCEE
Confidence 478888888866532 233222 236788999999999999999999999999977753
No 440
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.12 E-value=1.8e-10 Score=103.20 Aligned_cols=94 Identities=26% Similarity=0.438 Sum_probs=79.4
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeec-CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFS-SRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~-~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
..+|.+...|.+..+..|+++.|.|.+.|.|.+.+.|++++..+.. ..++.+. .++ .|.|.++...|+|.|+|.|.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~-~~~--~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQ-EQG--TLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEEC-TTC--CEEEESCCTTTCCEEEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEc-CCC--EEEEccCCcccCEEEEEEEE
Confidence 4678888889999999999999999999999999999999988763 3333332 222 79999999999999999999
Q ss_pred eCCCceEEEEEEeeccCC
Q psy8139 529 NRAGHSITKARLRLEAPP 546 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p 546 (1101)
|..|....++.|.|..+|
T Consensus 83 n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 83 SSSGETSWSAVLDVTESG 100 (100)
T ss_dssp CSSCCCBCCEEEEEESCC
T ss_pred cCCCCEEEEEEEEEecCC
Confidence 999988888888887653
No 441
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=3.1e-10 Score=105.62 Aligned_cols=97 Identities=21% Similarity=0.229 Sum_probs=69.3
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
.+|.+|.++.+...+.++|.|+|.+|...++ .+. +.+
T Consensus 17 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~-~i~------------------------------------------~~~ 53 (123)
T 2edd_A 17 TPMLPPVGVQAVALTHDAVRVSWADNSVPKN-QKT------------------------------------------SEV 53 (123)
T ss_dssp CSSCCCEEEEEEEEETTEEEEEEECSSSCSS-CCC------------------------------------------SCC
T ss_pred CCCCCCcceEEEEcCCCeEEEEecCCCCCcc-ccc------------------------------------------CcC
Confidence 4678888888888888889998886643322 000 124
Q ss_pred ceEEEEEEeCCC--CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEe
Q psy8139 720 LGYLVEHRRTGS--PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTV 782 (1101)
Q Consensus 720 ~~Y~V~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~ 782 (1101)
.+|.|.|+..+. ..|..+. ...++++|.+|.|+|.|.|+|+|.|..|.|++|....+.|.
T Consensus 54 ~~Y~v~y~~~~~~~~~~~~~~---~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~ 115 (123)
T 2edd_A 54 RLYTVRWRTSFSASAKYKSED---TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTY 115 (123)
T ss_dssp CCEEEEEEETTCTTCCCCCEE---ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECC
T ss_pred ceEEEEEEECCCCCccEEEEe---CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEcc
Confidence 488888887643 2232221 45789999999999999999999999999988875544433
No 442
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.12 E-value=4.8e-11 Score=128.70 Aligned_cols=217 Identities=11% Similarity=0.026 Sum_probs=77.5
Q ss_pred eEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC---e
Q psy8139 407 ELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP---K 483 (1101)
Q Consensus 407 ~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~---~ 483 (1101)
.|.|.++..+ +.|+|.+. ..|.. .+..+++.+... +..|.+... ...+.+|..++|.|.+.|.+++ .
T Consensus 51 ~~~l~~v~~~--~~y~C~~~-~~~~~----~~~~v~l~V~~~-P~~v~I~~~--~~~~~~G~~~~LtC~v~g~~P~~~l~ 120 (291)
T 1mq8_A 51 VYELSNVQED--SQPMCYSN-CPDGQ----STAKTFLTVYWT-PERVELAPL--PSWQPVGKNLTLRCQVEGGAPRANLT 120 (291)
T ss_dssp EEEEESCCSC--CCCEEEEE-CSSCE----EEEECEEEECBC-CSCCCBCCC--CSBCCSSCCCEEEEEECCCBSTTTEE
T ss_pred EEEEEecccC--CeEEEEEE-cCCcc----EEEEEEEEEecC-CCCCEEecC--CccccCCCCEEEEEEecCccCCCCcE
Confidence 5788888754 46999985 33321 233455555533 233333332 2447889999999999875443 5
Q ss_pred EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCc--------eEEEEEEeeccCCccccCCCCC
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGH--------SITKARLRLEAPPTIRLPKQYE 555 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~--------~~~s~~l~V~~~p~~~~~~~~~ 555 (1101)
|+|++++..+..... .......+|.+.....++.+.|+|.|.|..+. .+....|.|..+|........
T Consensus 121 itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~- 196 (291)
T 1mq8_A 121 VVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS- 196 (291)
T ss_dssp EEEESSSSEEEEEEC---CBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------
T ss_pred EEEEECCEEeecccC---CCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecC-
Confidence 899999977653220 11122346666666666777999999997653 233467888887543211111
Q ss_pred CCeEEeeCCEEEEEEEEeecCCC---eeEEEECCeecCCCCceEEEeecceEEEEEccC---CC--CCCeEEEEEEEeCC
Q psy8139 556 DGLLFEMGEIIKLKVSMAGMPPP---TARWLHNGEPLTSGGRYEITHTDRYLNLRISDA---RR--ADRGEYQAHGVNSL 627 (1101)
Q Consensus 556 ~~~~v~~g~~~~l~c~~~g~p~~---~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l---~~--~~~y~y~c~A~N~~ 627 (1101)
...+.+|+.++|.|.+.|.+++ .+.|.++|..+.... ...++ .+++..+ .. +..|.|+|.|.|..
T Consensus 197 -p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~----~~~g~--~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 269 (291)
T 1mq8_A 197 -PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV----TYGND--SFSAKASVSVTAEDEGTQRLTCAVILGN 269 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCcee----eecCC--eEEEEEecceeEcCCCCEEEEEEEEeCC
Confidence 1256789999999999997554 699999998876421 11121 2222222 22 34678888888755
Q ss_pred CCceeEEEEEEecCCCC
Q psy8139 628 GEDVASFLVTVTDRPLP 644 (1101)
Q Consensus 628 G~~~~s~~l~v~~~P~~ 644 (1101)
........++|...|.|
T Consensus 270 ~~~~~~~~l~v~~~~~~ 286 (291)
T 1mq8_A 270 QSQETLQTVTIYSFPAP 286 (291)
T ss_dssp -----------------
T ss_pred cceEEEEEEEEEcCCCc
Confidence 55556667777765544
No 443
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=2.2e-10 Score=104.71 Aligned_cols=97 Identities=30% Similarity=0.553 Sum_probs=78.8
Q ss_pred CCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEE
Q psy8139 346 GPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITA 425 (1101)
Q Consensus 346 ~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A 425 (1101)
.+|++|..+.+. .++.++++|+|.+|..+|+.+|.+|.|+++..+...|..........+.++|.+|.+++.|.|+|.|
T Consensus 6 ~~P~~P~~l~~~-~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2yuw_A 6 SGTSPPTLLTVD-SVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKA 84 (110)
T ss_dssp CCSCCCEEEEEE-EECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCCccEEE-eccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEE
Confidence 444555444333 6778999999999987888899999999998888889887655456789999999999999999999
Q ss_pred EecCCCCCCCCCCcceEE
Q psy8139 426 ENVVGFSEPGPLSEPLTV 443 (1101)
Q Consensus 426 ~n~~G~~~~s~~s~~vtv 443 (1101)
.|..|.+.++..+..+++
T Consensus 85 ~n~~G~s~~S~~~~~v~~ 102 (110)
T 2yuw_A 85 VNAAGASEPKYYSQPILV 102 (110)
T ss_dssp EETTEECCCEECSSCEEC
T ss_pred EcCCcCCCCcCCCCCEEe
Confidence 999999888766555543
No 444
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.11 E-value=1.7e-10 Score=120.28 Aligned_cols=132 Identities=15% Similarity=0.196 Sum_probs=89.7
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEec-cCCC-
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEG-IPTP- 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g-~p~~- 482 (1101)
..+|.|.++++.|+|.|+|.|.|..|.......+..+.+.+...+..+|.+...+....+..|+.++|.|.+.| .|.+
T Consensus 74 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~ 153 (218)
T 3s96_B 74 DRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGV 153 (218)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCC
T ss_pred eEEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCe
Confidence 45799999999999999999999876210111123355666555557787776555555667899999999988 5666
Q ss_pred eEEEEECCEEeecCCcEE--EEecCC---eeEEEEeecCCCCCEEEEEEEEeCCCceEE
Q psy8139 483 KVSWYKDGFEIFSSRRQR--IVTDND---ISTLIIHQAALMDEGEIKCTATNRAGHSIT 536 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~--~~~~~~---~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~ 536 (1101)
.++|+++|..+....... ....+. .+.|.|......|.|.|+|.|.|..+....
T Consensus 154 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 212 (218)
T 3s96_B 154 TVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEK 212 (218)
T ss_dssp EEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEE
T ss_pred EEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccc
Confidence 899999999876421110 011111 124778888788899999999998865443
No 445
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.11 E-value=4.9e-10 Score=109.44 Aligned_cols=101 Identities=28% Similarity=0.440 Sum_probs=86.0
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEec-CCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTD-NDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~-~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
..+|.|...+.++.+..|+++.|.|.+.|.|.+.+.|++++..+....++.+... .+...|.|.++...|+|.|+|.|.
T Consensus 39 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 118 (154)
T 1fhg_A 39 HVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAV 118 (154)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEE
Confidence 4678888888899999999999999999999999999999999987777776543 445699999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCcccc
Q psy8139 529 NRAGHSITKARLRLEAPPTIRL 550 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~~ 550 (1101)
|..|.....+.|.|..+|.+..
T Consensus 119 N~~G~~~~~~~l~V~~~p~~~~ 140 (154)
T 1fhg_A 119 NSLGEATCTAELLVETMGKEGE 140 (154)
T ss_dssp ETTEEEEEEEEEEEECC-----
T ss_pred ECCCeEEEEEEEEEeCcCcCCC
Confidence 9999998899999998876643
No 446
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.11 E-value=4.5e-10 Score=115.34 Aligned_cols=134 Identities=11% Similarity=0.064 Sum_probs=92.3
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCC---
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPT--- 481 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~--- 481 (1101)
...|.|.+++..|+|.|+|.|.|..|.. +..+.+.+...| ..|.+ .+. ..+..|+.++|.|.+.|.++
T Consensus 53 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~-----~~~~~l~V~~~p-~~~~~--~~~-~~~~~G~~~~L~C~~~~~~p~~~ 123 (202)
T 1vca_A 53 TSTLTMNPVSFGNEHSYLCTATCESRKL-----EKGIQVEIYSFP-KDPEI--HLS-GPLEAGKPITVKCSVADVYPFDR 123 (202)
T ss_dssp EEEEEESSCCGGGCSEEEEEEEETTEEE-----EEEEEEEEEBCC-SCCEE--EES-SCEETTSCEEEEEEEEEEBSGGG
T ss_pred ccEEEECcCCHHHCEEEEEEEEECCceE-----eeEEEEEEEeCC-CCCEe--CCc-eEEcCCCCEEEEEEECCcCCCCC
Confidence 3569999999999999999999987642 234555554321 12222 233 56889999999999988643
Q ss_pred CeEEEEECCEEeecCCcEEEE----ecCCeeEEEEeecCCCCCEEEEEEEEeCCCce-------EEEEEEeeccCCc
Q psy8139 482 PKVSWYKDGFEIFSSRRQRIV----TDNDISTLIIHQAALMDEGEIKCTATNRAGHS-------ITKARLRLEAPPT 547 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~~~~~~~----~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~-------~~s~~l~V~~~p~ 547 (1101)
+.++|++++..+......... .......|+|......|.|.|+|.|.|..|.. ..+..|.|.++|.
T Consensus 124 ~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 124 LEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 379999999877532100000 01112356788888889999999999988762 4467888888874
No 447
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=2.2e-10 Score=106.37 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=68.2
Q ss_pred CCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCCC--ceeecccccCccEEEEcCCCCCceEEEEE
Q psy8139 685 GPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPY--WVRASPHMVEDTELMVSGLEPGWRYQFRI 762 (1101)
Q Consensus 685 ~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 762 (1101)
+.|+.++.......++.+++.|+|++|.. +.|.+|.|.|+..+... +.... .....+.++|.+|.|++.|.|+|
T Consensus 16 ~~P~~~P~~l~~~~~~~~sv~l~W~~p~~---g~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V 91 (119)
T 2ee2_A 16 DAPSEAPTEVGVKVLSSSEISVHWEHVLE---KIVESYQIRYWAAHDKEEAANRVQ-VTSQEYSARLENLLPDTQYFIEV 91 (119)
T ss_dssp CCCCCCCCSCEEEEEETTEEEEECCCCSC---TTCCEEEEEEEESSSCGGGCEEEE-EETTCSEEEECSCCTTCEEEEEE
T ss_pred cCCCCCCCcEEEEEccCCEEEEEecCCCC---CccceEEEEEEECCCcccCcEEEE-cCCCEeEEEECCCCCCCEEEEEE
Confidence 34443332223345678999999999865 67999999998876432 22222 22566799999999999999999
Q ss_pred EEEcCCccCCCCCCCCcEE
Q psy8139 763 TAENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 763 ~A~n~~G~g~~S~~s~~~t 781 (1101)
+|.|..|.|++|....+.|
T Consensus 92 ~A~n~~G~g~~S~~~~~~T 110 (119)
T 2ee2_A 92 GACNSAGCGPPSDMIEAFT 110 (119)
T ss_dssp EEECSSSCCCCCCCEEEEC
T ss_pred EEEcCCccCCCCCCEEEEC
Confidence 9999999998876655444
No 448
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.6e-10 Score=108.17 Aligned_cols=82 Identities=16% Similarity=0.169 Sum_probs=63.9
Q ss_pred CCCCceEEEEeeCCC-CCCCCCcceEEEEEEeCCC---CCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCC
Q psy8139 698 SLDRDVFTIRWEPPE-YDGGSPVLGYLVEHRRTGS---PYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEP 773 (1101)
Q Consensus 698 ~~~~~si~l~W~pP~-~~~~~~i~~Y~V~~~~~~~---~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 773 (1101)
..+.+++.|+|++|. ...++.|++|.|.|+..+. ..|..... .+.++++|.+|.|++.|.|+|.|+|..|.|++
T Consensus 30 ~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~ 107 (124)
T 2dbj_A 30 NESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVG--QNGSRARISVQVHNATCTVRIAAVTRGGVGPF 107 (124)
T ss_dssp CSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEE--STTSCEEEECCCSSSEEEECEEEEESSCBCCC
T ss_pred cCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeC--CCcceEEecCCCCCCEEEEEEEEECCCccCCC
Confidence 467899999999983 3455679999999974332 34443322 56789999999999999999999999999998
Q ss_pred CCCCCcEE
Q psy8139 774 GPLSEPLT 781 (1101)
Q Consensus 774 S~~s~~~t 781 (1101)
|....+.|
T Consensus 108 S~~~~~~T 115 (124)
T 2dbj_A 108 SDPVKIFI 115 (124)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEc
Confidence 86654444
No 449
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=7.6e-10 Score=102.53 Aligned_cols=100 Identities=28% Similarity=0.498 Sum_probs=83.9
Q ss_pred ccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEEE
Q psy8139 543 EAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQAH 622 (1101)
Q Consensus 543 ~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~ 622 (1101)
..+|.+..+......+.+..|+.+.|.|.+.|.|.|.+.|+++|..+. ..++.+...+....|.|.++...|.|.|+|.
T Consensus 19 ~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 97 (118)
T 2e7c_A 19 AEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELS 97 (118)
T ss_dssp SEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEE
T ss_pred ccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEE
Confidence 346666555444566789999999999999999999999999999987 4456666666678899999999999999999
Q ss_pred EEeCCCCceeEEEEEEecCCC
Q psy8139 623 GVNSLGEDVASFLVTVTDRPL 643 (1101)
Q Consensus 623 A~N~~G~~~~s~~l~v~~~P~ 643 (1101)
|.|..|.......|.|.++|+
T Consensus 98 a~N~~G~~~~~~~l~V~~~P~ 118 (118)
T 2e7c_A 98 VQIENMKDTATIRIRVVEKAG 118 (118)
T ss_dssp EECSSCEECCEEEEEEECCCC
T ss_pred EEeCCCeEEEEEEEEEEcCCC
Confidence 999999888899999987763
No 450
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=2e-10 Score=103.53 Aligned_cols=92 Identities=25% Similarity=0.432 Sum_probs=71.7
Q ss_pred CCCCCcccCCCCCCCCceEEEEeeCCC-CCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEE
Q psy8139 686 PPGKPQLLPDSPSLDRDVFTIRWEPPE-YDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITA 764 (1101)
Q Consensus 686 ~p~~p~~~~~~~~~~~~si~l~W~pP~-~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 764 (1101)
||++|..+ .....+.+++.|+|++|. ...++.|.+|.|.|+..+...|.... ...++++|.+|.|++.|.|+|.|
T Consensus 8 pp~~P~~l-~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~A 83 (103)
T 2edy_A 8 PSGFPQNL-HVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNI---TTDTRFTLTGLKPDTTYDIKVRA 83 (103)
T ss_dssp CSCCCEEE-ECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEE---ESSSCCEECSCCTTCCEEEECCE
T ss_pred CCCCCeee-EEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEc---CCcceEEEcCCCCCCEEEEEEEE
Confidence 34444433 344678899999999984 34456799999999988776555442 56788999999999999999999
Q ss_pred EcCCccCCCCCCCCcEE
Q psy8139 765 ENVVGFSEPGPLSEPLT 781 (1101)
Q Consensus 765 ~n~~G~g~~S~~s~~~t 781 (1101)
.|..|.|++|....+.|
T Consensus 84 ~n~~G~g~~S~~~~~~T 100 (103)
T 2edy_A 84 WTSKGSGPLSPSIQSRT 100 (103)
T ss_dssp ECSSCBCCCCCCCCCCC
T ss_pred ECCCCCCCCCCCEEEEe
Confidence 99999999887665544
No 451
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=2.7e-10 Score=104.14 Aligned_cols=98 Identities=32% Similarity=0.475 Sum_probs=84.0
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeec-CCcEEEEec-CCeeEEEEeecCCCCCEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFS-SRRQRIVTD-NDISTLIIHQAALMDEGEIKCTA 527 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~-~~~~~~~~~-~~~~~l~I~~l~~~d~g~Y~C~a 527 (1101)
..+|.|...|.++.+..|+++.|.|.+.|.|.+.+.|++++..+.. ..++.+... ++...|.|.++...|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 4678888888899999999999999999999999999999988775 455655544 44458999999999999999999
Q ss_pred EeCCCceEEEEEEeeccCCc
Q psy8139 528 TNRAGHSITKARLRLEAPPT 547 (1101)
Q Consensus 528 ~n~~g~~~~s~~l~V~~~p~ 547 (1101)
.|..|.....+.|.|..+|.
T Consensus 86 ~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp ECTTCCEEECCCEEEECCSC
T ss_pred EECCCeEEEEEEEEEECCCC
Confidence 99999988888888887664
No 452
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.09 E-value=1.3e-09 Score=116.70 Aligned_cols=127 Identities=14% Similarity=0.089 Sum_probs=91.1
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCC-------CCCCCCCcceEEEeccCCC-----------CCCeeeecCceeEEccC
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGF-------SEPGPLSEPLTVTYQRSPA-----------AAPSFIRALHDTTALED 467 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~-------~~~s~~s~~vtv~~~~~~~-----------~~P~~~~~p~~~~v~~g 467 (1101)
.+|+|.++++.|+|.|.|.|.|.... ...........+.+...+. .+|.+...|..+.+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 46999999999999999999986110 0001111234455543222 15677788899999999
Q ss_pred CeEEEEEEEeccCC-CeEEEEEC--CEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCC
Q psy8139 468 EKVEFTVQVEGIPT-PKVSWYKD--GFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAG 532 (1101)
Q Consensus 468 ~~v~L~C~~~g~p~-~~v~W~~~--g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g 532 (1101)
++++|.|.+.+.|. +.+.|++. +.... ...++.+...+...+|+|.++..+|+|.|.|.|.|..+
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999998876 89999982 22111 22455555566667899999999999999999988644
No 453
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.09 E-value=1.6e-09 Score=114.45 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=87.5
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCC--------CCCeeeecCceeEEccCCeEEEEEEE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPA--------AAPSFIRALHDTTALEDEKVEFTVQV 476 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~--------~~P~~~~~p~~~~v~~g~~v~L~C~~ 476 (1101)
..+|.|.++++.|+|.|+|.|.|..|.......+....+.+...+. ..+.+...|..+.+.+|++++|.|.+
T Consensus 72 ~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 151 (238)
T 2p1y_A 72 NFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSY 151 (238)
T ss_dssp BCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEEC
T ss_pred eEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEE
Confidence 4579999999999999999999986632111111223344432111 01256667888889999999999999
Q ss_pred eccCCCeEEEEECC-----EEe---------ecCCcEEEE--ecCCeeEEEEeecCCCCCEEEEEEEEeCC
Q psy8139 477 EGIPTPKVSWYKDG-----FEI---------FSSRRQRIV--TDNDISTLIIHQAALMDEGEIKCTATNRA 531 (1101)
Q Consensus 477 ~g~p~~~v~W~~~g-----~~~---------~~~~~~~~~--~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~ 531 (1101)
.+.|.+.+.|++++ ..+ ....++.+. ......+|+|.++...|+|.|+|.|.|..
T Consensus 152 ~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 152 ENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred ecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99999999999953 111 112344443 23445689999999999999999999974
No 454
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.08 E-value=1.8e-10 Score=116.67 Aligned_cols=115 Identities=17% Similarity=0.106 Sum_probs=80.6
Q ss_pred cceEEEcC-ccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCC--------------CCeee----ecCce---e
Q psy8139 405 DTELMVSG-LEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAA--------------APSFI----RALHD---T 462 (1101)
Q Consensus 405 ~~~l~i~~-L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~--------------~P~~~----~~p~~---~ 462 (1101)
+.+|.|.+ ++..|+|.|+|.|.|..|... ..+++.+...... +|.+. ..... .
T Consensus 43 ~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (186)
T 1jbj_A 43 DKHLVLQDFSEVEDSGYYVCYTPASNKNTY-----LYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVD 117 (186)
T ss_dssp CSEEEEESCCTTTSCEEEEEECSSCCCCCC-----EEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEEC
T ss_pred CCEEEECCCCccccCEEEEEEEEeCCCcEE-----EEEEEEEecccccccccccccccccCCccccccccccccccccce
Confidence 46899999 999999999999999888621 1122222111000 01110 00011 1
Q ss_pred EEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCce
Q psy8139 463 TALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHS 534 (1101)
Q Consensus 463 ~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~ 534 (1101)
.+..|+++.|.|.+ |.|.++|+++|..+..... ....|.|.++...|+|.|+|.|.|..|..
T Consensus 118 ~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 118 GSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC-------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC-------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 23489999999998 7889999999998864322 23479999999999999999999988765
No 455
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.08 E-value=1.4e-10 Score=105.05 Aligned_cols=94 Identities=24% Similarity=0.419 Sum_probs=84.6
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.|...|.++.+..|+++.|.|.+.|.|.|.+.|+++|..+....++.+...+....|.|.++...|+|.|+|.|.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 46788888999999999999999999999999999999999888777788777776678999999999999999999999
Q ss_pred CCCceEEEEEEeec
Q psy8139 530 RAGHSITKARLRLE 543 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~ 543 (1101)
..|....++.|.|.
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99998888887774
No 456
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.08 E-value=2.5e-10 Score=104.69 Aligned_cols=94 Identities=23% Similarity=0.417 Sum_probs=69.8
Q ss_pred CCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEec-CCCceEEcCccc-----------cccceEEEcC
Q psy8139 345 PGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRT-GSPYWVRASPHM-----------VEDTELMVSG 412 (1101)
Q Consensus 345 p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~-~~~~w~~~~~~~-----------~~~~~l~i~~ 412 (1101)
+.+|++|.+ ..++.++++|+|.+|.++| ++|++|.|+++.. ....|....... ....+++|.+
T Consensus 3 ~~pP~~P~v----~~~~~~sv~L~W~~P~~~G-~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 77 (115)
T 2ic2_A 3 TYPPTPPNV----TRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTD 77 (115)
T ss_dssp CCCCCCCEE----EECC---EEEEEEEECCSS-CCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECS
T ss_pred cCCCCcCEe----EEEeCCEEEEEEcCCCCCC-CCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCC
Confidence 345666664 3678999999999997665 7999999999987 456787654322 2335789999
Q ss_pred ccCCccEEEEEEEEecCCCCCCCCCCcceEE
Q psy8139 413 LEPGWRYQFRITAENVVGFSEPGPLSEPLTV 443 (1101)
Q Consensus 413 L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv 443 (1101)
|.|++.|.|+|.|.|..|.+.+|..|..+.+
T Consensus 78 L~p~t~Y~FRV~A~N~~G~~~pS~~S~~~~~ 108 (115)
T 2ic2_A 78 LKPQHTYRFRILAVYSNNDNKESNTSAKFYL 108 (115)
T ss_dssp CCSSEEEEEEEEEEETTSCEEECCCCCCEEE
T ss_pred CCCCCEEEEEEEEEeCCCCCCCCCCCCCEEe
Confidence 9999999999999999999888877776655
No 457
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=99.08 E-value=3.7e-10 Score=100.29 Aligned_cols=84 Identities=24% Similarity=0.203 Sum_probs=64.5
Q ss_pred CCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCcc
Q psy8139 641 RPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVL 720 (1101)
Q Consensus 641 ~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i~ 720 (1101)
.|++|.++.+..++.+++.|+|.+|. +.+.
T Consensus 4 ~~~~P~~l~v~~~t~~Si~lsW~~p~--------------------------------------------------~~i~ 33 (97)
T 3qht_C 4 VSSVPTKLEVVAATPTSLLISWDASS--------------------------------------------------SSVS 33 (97)
T ss_dssp -CCSSSSCEEEEEETTEEEEECCCCC--------------------------------------------------SSCC
T ss_pred CCCCCCceEEEecCCCEEEEEEeCCC--------------------------------------------------CCCC
Confidence 57888888888888888888888642 2477
Q ss_pred eEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCC
Q psy8139 721 GYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPG 774 (1101)
Q Consensus 721 ~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 774 (1101)
+|.|.|...++..+........+.++++|.+|.|++.|.|+|.|.|..|.|++|
T Consensus 34 ~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~~G~gp~s 87 (97)
T 3qht_C 34 YYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYYDLYYS 87 (97)
T ss_dssp EEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEETTEEEE
T ss_pred EEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCccCCCC
Confidence 888888876654322222233678999999999999999999999999998765
No 458
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.07 E-value=5.6e-10 Score=116.70 Aligned_cols=135 Identities=13% Similarity=0.169 Sum_probs=90.9
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc-CCC-
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI-PTP- 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~-p~~- 482 (1101)
..+|.|.++++.|+|.|.|.+.|..|............+.+...+..+|.+...+....+..|+.++|.|.+.|. |.|
T Consensus 80 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~ 159 (222)
T 1q9r_B 80 ILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPV 159 (222)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCC
T ss_pred eEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCC
Confidence 458999999999999999999987652110011122455555444456776554434446789999999999985 888
Q ss_pred eEEEEECCEEeecCCcEEEEecC---CeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEE
Q psy8139 483 KVSWYKDGFEIFSSRRQRIVTDN---DISTLIIHQAALMDEGEIKCTATNRAGHSITKARL 540 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~~~~~~~---~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l 540 (1101)
.++|+++|..+...........+ ..+.|.|.++...| |.|+|.|.|..|.......+
T Consensus 160 ~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 160 TVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp EEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 99999988654321111111111 12368899988889 99999999998876554433
No 459
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=1.7e-10 Score=107.63 Aligned_cols=83 Identities=17% Similarity=0.330 Sum_probs=64.9
Q ss_pred CCCCCCceEEEEeeCCCCCCCCCcceEEEEEEeCCCC---CceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCC
Q psy8139 696 SPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSP---YWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSE 772 (1101)
Q Consensus 696 ~~~~~~~si~l~W~pP~~~~~~~i~~Y~V~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 772 (1101)
...++.+++.|+|++|. +.++.|.+|.|+|+..+.. .|..... ...++++|.+|.|++.|.|+|.|.|..|.|+
T Consensus 27 ~~~~~~~sv~l~W~~p~-~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 103 (121)
T 2dlh_A 27 ARMLSSTTILVQWKEPE-EPNGQIQGYRVYYTMDPTQHVNNWMKHNV--ADSQITTIGNLVPQKTYSVKVLAFTSIGDGP 103 (121)
T ss_dssp ECCCSSSBCCEEEECCS-CCCSCEEEEEEECCSCTTSCTTTSCCCCC--SSCSEECCBSCCSSCEEEEEEEEEESSCBCC
T ss_pred EEecCCCEEEEEECCCC-CCCCcEeEEEEEEEeCCCCCccccEEEec--CCceEEEecCCCCCCEEEEEEEEEeCCccCC
Confidence 34568899999999985 4556799999999876543 3333222 5678999999999999999999999999988
Q ss_pred CCCCCCcEE
Q psy8139 773 PGPLSEPLT 781 (1101)
Q Consensus 773 ~S~~s~~~t 781 (1101)
+|....+.|
T Consensus 104 ~S~~~~~~T 112 (121)
T 2dlh_A 104 LSSDIQVIT 112 (121)
T ss_dssp CCCCEEEEC
T ss_pred CCCCEEEEC
Confidence 876554443
No 460
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.07 E-value=3.7e-10 Score=96.82 Aligned_cols=82 Identities=26% Similarity=0.410 Sum_probs=71.2
Q ss_pred CceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKA 538 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~ 538 (1101)
+.++.+.+|+++.|.|.+.+ |.|.|+|+++|..+..+.++.+...++...|.|.++...|+|.|+|.| |....++
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----~n~~~~a 77 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDA----PQDSRIF 77 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEEC----TTTCEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEE----CCEEEEE
Confidence 45678999999999999866 888999999999999888898888888889999999999999999987 4455677
Q ss_pred EEeeccC
Q psy8139 539 RLRLEAP 545 (1101)
Q Consensus 539 ~l~V~~~ 545 (1101)
.|.|..|
T Consensus 78 ~l~V~eP 84 (84)
T 2lu7_A 78 LVSVEEP 84 (84)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 7887654
No 461
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.07 E-value=1.3e-10 Score=109.05 Aligned_cols=86 Identities=20% Similarity=0.213 Sum_probs=65.7
Q ss_pred CCCCCCceEEEEeeCCCC-CCCCCcceEEEEEEeCCCCCce-------eecccccCccEEEEcCCCCCceEEEEEEEEcC
Q psy8139 696 SPSLDRDVFTIRWEPPEY-DGGSPVLGYLVEHRRTGSPYWV-------RASPHMVEDTELMVSGLEPGWRYQFRITAENV 767 (1101)
Q Consensus 696 ~~~~~~~si~l~W~pP~~-~~~~~i~~Y~V~~~~~~~~~~~-------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 767 (1101)
...++.+++.|+|++|.. ..++.|.+|.|.|+..+...+. .........++++|.+|.|++.|.|+|.|+|.
T Consensus 23 ~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 102 (125)
T 1uen_A 23 VNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNG 102 (125)
T ss_dssp EEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEEEEEEEES
T ss_pred EEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEEEeCCCCCCCEEEEEEEEecC
Confidence 335678899999999843 3456799999999987654431 11122367789999999999999999999999
Q ss_pred CccCCCCCCCCcEE
Q psy8139 768 VGFSEPGPLSEPLT 781 (1101)
Q Consensus 768 ~G~g~~S~~s~~~t 781 (1101)
.|.|++|....+.|
T Consensus 103 ~G~g~~S~~~~~~T 116 (125)
T 1uen_A 103 KGEGPASPDRVFNT 116 (125)
T ss_dssp SCEEEECCCEEEEC
T ss_pred CCCCCCCCCEEEEC
Confidence 99988876554443
No 462
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.06 E-value=1.5e-09 Score=111.78 Aligned_cols=165 Identities=12% Similarity=0.116 Sum_probs=105.6
Q ss_pred eecCceeEEccCCeEEEEEEEeccCCCeEEEEECC-----EEee-------cCCcEEEEec---CCeeEEEEeecCCCCC
Q psy8139 456 IRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG-----FEIF-------SSRRQRIVTD---NDISTLIIHQAALMDE 520 (1101)
Q Consensus 456 ~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g-----~~~~-------~~~~~~~~~~---~~~~~l~I~~l~~~d~ 520 (1101)
...|..+.+..|++++|.|.+.+.+ +.+.|++.. ..+. ...++.+..+ .+..+|.|.++..+|+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp EESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred EECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 4456778899999999999998755 489999842 1111 2356666644 5567899999999999
Q ss_pred EEEEEEEEeCCCc-----------eEEEEEEeeccCCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEECCe
Q psy8139 521 GEIKCTATNRAGH-----------SITKARLRLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHNGE 587 (1101)
Q Consensus 521 g~Y~C~a~n~~g~-----------~~~s~~l~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~g~ 587 (1101)
|.|.|.+.+..+. ....+.|.|...+....+|. +.+..+ .+.|.|.+.+. |. +.+.|.++ .
T Consensus 84 G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~----v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~ 157 (207)
T 1ypz_E 84 GTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPS----VFIMKN-GTNVACLVKDFYPKEVTISLRSS-K 157 (207)
T ss_dssp EEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCE----EEEEEE-TTEEEEEEEEESSSCCEEEEECS-S
T ss_pred EEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCe----EEEeCC-CCeEEEEEeeEeCCCeEEEEecC-C
Confidence 9999999987431 11235677765322211221 122222 26899999975 43 79999998 6
Q ss_pred ecCCCCceEEEeecceEEEEEccCCC-CCCeEEEEEEEeCCCC
Q psy8139 588 PLTSGGRYEITHTDRYLNLRISDARR-ADRGEYQAHGVNSLGE 629 (1101)
Q Consensus 588 ~l~~~~~~~~~~~~~~~sl~i~~l~~-~~~y~y~c~A~N~~G~ 629 (1101)
.+........... .+.+.+..+.. .+.+.|+|.+.|..+.
T Consensus 158 ~l~~~~~~~~~~~--~g~y~~~~~~~~~~~~~ytC~v~~~~~~ 198 (207)
T 1ypz_E 158 KIVEFDPAIVISP--SGKYSAVKLGQYGDSNSVTCSVQHNSET 198 (207)
T ss_dssp EEEECCCEEEECT--TSSEEEEECEEESSTTTCEEEEEETTEE
T ss_pred cccCCccceEEcC--CCcEEEEEeecccCCCcEEEEEEECCcc
Confidence 6543221111111 22333333333 5679999999998764
No 463
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.06 E-value=6.1e-10 Score=100.85 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=41.9
Q ss_pred ceEEEEEEeC-CCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCCCCCcEEe
Q psy8139 720 LGYLVEHRRT-GSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTV 782 (1101)
Q Consensus 720 ~~Y~V~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~s~~~t~ 782 (1101)
.+|.|.|+.. +...|.. ..+.++|.+|.|++.|.|+|+|.|..|.|++|....+.|.
T Consensus 42 ~~Y~v~y~~~~~~~~~~~------~~~~~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~ 99 (107)
T 1x5a_A 42 LSYELHVLNQDEEWHQMV------LEPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTS 99 (107)
T ss_dssp CEEEEEEECSSCEEEEEE------SSSEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECC
T ss_pred eEEEEEEEeCCCCceEEE------ecceEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEEC
Confidence 7788887765 2112211 1223999999999999999999999999999877665443
No 464
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.05 E-value=6.9e-10 Score=102.28 Aligned_cols=93 Identities=17% Similarity=0.132 Sum_probs=68.3
Q ss_pred CCCCCCCCcccCCCCCCCCceEEEEeeCCC-CCCCCCcceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEE
Q psy8139 683 PPGPPGKPQLLPDSPSLDRDVFTIRWEPPE-YDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFR 761 (1101)
Q Consensus 683 ~~~~p~~p~~~~~~~~~~~~si~l~W~pP~-~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 761 (1101)
..++|+.++....... +.++|.|+|++|. ...++.|++|.|.|+..+...+.... ...+.+.+. |.|++.|.|+
T Consensus 14 ~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~---~~~~~~~~~-L~~~t~Y~~~ 88 (117)
T 1wj3_A 14 KKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN---TNKTSAELV-LPIKEDYIIE 88 (117)
T ss_dssp SCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE---ESSSEEEEE-CCCSSCEEEE
T ss_pred cCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEe---CCCcEEEEE-CCCCCEEEEE
Confidence 3455664444333333 7789999999974 34667799999999988765553222 345678888 9999999999
Q ss_pred EEEEcCCccCCCCCCCCcE
Q psy8139 762 ITAENVVGFSEPGPLSEPL 780 (1101)
Q Consensus 762 V~A~n~~G~g~~S~~s~~~ 780 (1101)
|.|+|..|.|++|....+.
T Consensus 89 V~A~n~~G~Gp~S~~v~~~ 107 (117)
T 1wj3_A 89 VKATTDGGDGTSSEQIRIP 107 (117)
T ss_dssp EEEEESSCCCCBCCCEEEC
T ss_pred EEEECCCccCCCCCCEEEE
Confidence 9999999999987654433
No 465
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.05 E-value=2.1e-09 Score=115.14 Aligned_cols=140 Identities=12% Similarity=0.104 Sum_probs=96.6
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccC----------CCCCCeeeecCceeEEccCCeEEEEE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS----------PAAAPSFIRALHDTTALEDEKVEFTV 474 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~----------~~~~P~~~~~p~~~~v~~g~~v~L~C 474 (1101)
..+|.|.++++.|+|.|.|.|.|..+... ...+....+.+... ...+|.+...|....+.+|++++|.|
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C 163 (257)
T 3gkz_A 85 QVYLQLKSVSSEDTATYYCSYFDSDDYAM-EYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTC 163 (257)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTC-EEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEE
T ss_pred eEEEEECCCChhhCEEEEEEEecCCCcce-eEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEE
Confidence 34799999999999999999999732221 11122344444422 12346677778889999999999999
Q ss_pred EEeccCCC-eEEEEEC--CEEee------------cCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEE-EE
Q psy8139 475 QVEGIPTP-KVSWYKD--GFEIF------------SSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSIT-KA 538 (1101)
Q Consensus 475 ~~~g~p~~-~v~W~~~--g~~~~------------~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~-s~ 538 (1101)
.+.+.|.+ .+.|++. +.... ...++.....+...+|+|.++..+|+|.|.|.|.+....... ..
T Consensus 164 ~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt 243 (257)
T 3gkz_A 164 SASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGT 243 (257)
T ss_dssp EESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCE
T ss_pred EEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCE
Confidence 99998887 8999983 22111 024555555566678999999999999999999875433222 24
Q ss_pred EEeeccC
Q psy8139 539 RLRLEAP 545 (1101)
Q Consensus 539 ~l~V~~~ 545 (1101)
.|.|...
T Consensus 244 ~l~v~~~ 250 (257)
T 3gkz_A 244 KLEIKRA 250 (257)
T ss_dssp EEEECCC
T ss_pred EEEEEeC
Confidence 5666543
No 466
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.05 E-value=1.4e-10 Score=120.20 Aligned_cols=130 Identities=16% Similarity=0.137 Sum_probs=93.6
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc--CCC
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI--PTP 482 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~--p~~ 482 (1101)
..+|.|.++++.|+|.|+|.|.|..|... .+..+.+.+...+..+|.+...+....+..|+.++|.|.+.|. |.+
T Consensus 67 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~---~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~ 143 (211)
T 3tv3_L 67 TASLTVSGLQTDDEAVYYCGSLVGNWDVI---FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAV 143 (211)
T ss_dssp EEEEEEESCCGGGCEEEEEEEEETTTEEE---ECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCC
T ss_pred EEEEEECCCChhHCEEEEEEEecCCCcee---ECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCe
Confidence 45799999999999999999999876211 1233556665455577888777766666689999999999885 357
Q ss_pred eEEEEECCEEeecCCcE--EEEecCC----eeEEEEeecCCCCCEEEEEEEEeCCCceEEE
Q psy8139 483 KVSWYKDGFEIFSSRRQ--RIVTDND----ISTLIIHQAALMDEGEIKCTATNRAGHSITK 537 (1101)
Q Consensus 483 ~v~W~~~g~~~~~~~~~--~~~~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s 537 (1101)
.+.|+++|..+...... .....++ .+.|.|.++...|.|.|+|.|.|..+....+
T Consensus 144 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~ 204 (211)
T 3tv3_L 144 TVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 204 (211)
T ss_dssp EEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEE
T ss_pred EEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEee
Confidence 89999999987542110 0111111 1468898888889999999999988655443
No 467
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.05 E-value=8.3e-10 Score=99.42 Aligned_cols=97 Identities=27% Similarity=0.410 Sum_probs=82.3
Q ss_pred eccCCccccCCCCCCCeEEeeCCEEEEEEEEeecCCCeeEEEECCeecCCCCceEEEeecceEEEEEccCCCCCCeEEEE
Q psy8139 542 LEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAGMPPPTARWLHNGEPLTSGGRYEITHTDRYLNLRISDARRADRGEYQA 621 (1101)
Q Consensus 542 V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c 621 (1101)
+..+|.+..++ ....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+...+...+|.|.++...|.|.|+|
T Consensus 5 ~~~~P~~~~~~---~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 5 LDHAPRITLRM---RSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRA 81 (103)
T ss_dssp TCEEEEEEECC---CCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCEEEeCC---cceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEE
Confidence 33455554443 345788999999999999999999999999999988878887777777899999999999999999
Q ss_pred EEEeCCCCceeEEEEEEecC
Q psy8139 622 HGVNSLGEDVASFLVTVTDR 641 (1101)
Q Consensus 622 ~A~N~~G~~~~s~~l~v~~~ 641 (1101)
.|.|..|.......|.|.+.
T Consensus 82 ~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 82 VCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEEETTEEEEEEEEEEEECC
T ss_pred EEEeCCCcEEEEEEEEEECC
Confidence 99999999888888888754
No 468
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.05 E-value=2.9e-10 Score=103.45 Aligned_cols=95 Identities=24% Similarity=0.410 Sum_probs=72.1
Q ss_pred CCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeC
Q psy8139 451 AAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNR 530 (1101)
Q Consensus 451 ~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~ 530 (1101)
.+|.+...+.+..+..|+++.|.|.+.|.|.+.+.|++++..+.....+.....+ ..|.|.++...|+|.|+|.|.|.
T Consensus 9 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~D~G~Y~C~a~n~ 86 (108)
T 3kvq_A 9 VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGN--RNLTIRRVRKEDEGLYTCQACSV 86 (108)
T ss_dssp --CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTT--TEEEECSCCGGGCEEEEEEEC--
T ss_pred CCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCC--cEEEEeecCcccCEEEEEEEEeC
Confidence 6788888888999999999999999999999999999999888766665554333 48999999999999999999999
Q ss_pred CCceEEEEEEeeccCCc
Q psy8139 531 AGHSITKARLRLEAPPT 547 (1101)
Q Consensus 531 ~g~~~~s~~l~V~~~p~ 547 (1101)
.|.....+.|.|..+|.
T Consensus 87 ~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 87 LGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp --CEEEEEEEEEEC---
T ss_pred CCceEEEEEEEEeCCCc
Confidence 99999999999987664
No 469
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.04 E-value=9.6e-10 Score=100.33 Aligned_cols=98 Identities=34% Similarity=0.489 Sum_probs=76.5
Q ss_pred ccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEE
Q psy8139 341 IKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQ 420 (1101)
Q Consensus 341 v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~ 420 (1101)
...+|.+|..+.++ ..++.++++|+|.+|..+++.+|.+|.|+++..+...|..... .....++|.+|.+++.|.
T Consensus 5 ~~~~P~~P~~~~~~---~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~ 79 (110)
T 2crz_A 5 SSGPPGPCLPPRLQ---GRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ--GSEVECTVSSLLPGKTYS 79 (110)
T ss_dssp CCCCCCCCCCCEEC---SCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE--ESCSEEEEESCCTTCEEE
T ss_pred cCCCCCCCCCceec---cccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEe--CCcEEEEECCcCCCCEEE
Confidence 34556666666653 2567889999999987788889999999999877777876542 456789999999999999
Q ss_pred EEEEEEecCCCCCCCCCCcceEEEec
Q psy8139 421 FRITAENVVGFSEPGPLSEPLTVTYQ 446 (1101)
Q Consensus 421 y~c~A~n~~G~~~~s~~s~~vtv~~~ 446 (1101)
|+|.|.|..|.+.+| ..+.+...
T Consensus 80 frV~A~n~~G~g~~S---~~~~~~T~ 102 (110)
T 2crz_A 80 FRLRAANKMGFGPFS---EKCDITTA 102 (110)
T ss_dssp ECCEEECSSCBCCCC---CCEEEECC
T ss_pred EEEEEEcCCccCCCC---CccccccC
Confidence 999999999988766 34444433
No 470
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.04 E-value=1.7e-09 Score=113.94 Aligned_cols=170 Identities=14% Similarity=0.146 Sum_probs=106.4
Q ss_pred CceeEEccCCeEEEEEEEeccC--CCeE--EEEECC-----EEe-----ec-----------CCcEEEEec--CCeeEEE
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIP--TPKV--SWYKDG-----FEI-----FS-----------SRRQRIVTD--NDISTLI 511 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p--~~~v--~W~~~g-----~~~-----~~-----------~~~~~~~~~--~~~~~l~ 511 (1101)
|..+.+..|++++|.|.+.+.+ ...+ .|++.. ..+ .. ..++.+... .+..+|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 3346789999999999997632 2344 999731 111 00 135555443 3556899
Q ss_pred EeecCCCCCEEEEEEEEeCCC--------ceEEEEEEeecc----CCccc-cCCCCCCCeEEeeCCEEEEEEEEeecC--
Q psy8139 512 IHQAALMDEGEIKCTATNRAG--------HSITKARLRLEA----PPTIR-LPKQYEDGLLFEMGEIIKLKVSMAGMP-- 576 (1101)
Q Consensus 512 I~~l~~~d~g~Y~C~a~n~~g--------~~~~s~~l~V~~----~p~~~-~~~~~~~~~~v~~g~~~~l~c~~~g~p-- 576 (1101)
|.++..+|+|.|.|.+.+..+ .......|.|.. +|.+. .++. ..+..|..+.|.|.+.+.+
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~~~~P~ 162 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPS----SKSTSGGTAALGCLVKDYFPE 162 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-----------CEEEEEEEEEEEBSS
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEeccc----ccccCCCcEEEEEEEeeEeCC
Confidence 999999999999999997631 122234566652 33332 1211 1345689999999999854
Q ss_pred CCeeEEEECCeecCC---------CCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEEE
Q psy8139 577 PPTARWLHNGEPLTS---------GGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVTV 638 (1101)
Q Consensus 577 ~~~v~W~~~g~~l~~---------~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~v 638 (1101)
.+.+.|.+++..+.. ++.+.+ .+.|.|......+ |.|+|.|.|..+.......+.+
T Consensus 163 ~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 163 PVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp CCEEEEGGGTBCTTEEECCCEECTTSCEEE-----EEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CeEEEEEECCEecceeeccceeCCCCCEEE-----EEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 346889998864321 112221 3468888888778 9999999998877655554443
No 471
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=99.04 E-value=5.6e-10 Score=103.37 Aligned_cols=87 Identities=24% Similarity=0.293 Sum_probs=65.3
Q ss_pred ecCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCC
Q psy8139 639 TDRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSP 718 (1101)
Q Consensus 639 ~~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~ 718 (1101)
..+|.+|.++.+..++.++|.|+|.+|. +.
T Consensus 26 ~tp~~~P~~l~v~~~t~~Si~lsW~~p~--------------------------------------------------~~ 55 (121)
T 2ocf_D 26 GSVSDVPTKLEVVAATPTSLLISWDAPA--------------------------------------------------VT 55 (121)
T ss_dssp ---CCSCEEEEEEEECSSCEEEEEECCS--------------------------------------------------SC
T ss_pred cCCCCCCCccEEEecCCCEEEEEEcCCC--------------------------------------------------CC
Confidence 3567899999999888888888888653 12
Q ss_pred cceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCCC
Q psy8139 719 VLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPGP 775 (1101)
Q Consensus 719 i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 775 (1101)
|.+|.|.|...++..+........+.++++|.+|.|++.|.|+|.|.|..|.|++|.
T Consensus 56 i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~~~~G~g~~Ss 112 (121)
T 2ocf_D 56 VRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAGS 112 (121)
T ss_dssp CCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEEEEEEECCHHHHHHSC
T ss_pred CcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCCccCCCC
Confidence 677888887766543222222235778999999999999999999999999988753
No 472
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.04 E-value=1.8e-09 Score=114.25 Aligned_cols=170 Identities=13% Similarity=0.114 Sum_probs=109.0
Q ss_pred CceeEEccCCeEEEEEEEeccCC----CeEEEEECC-----EEe---e----------------cCCcEEEEec--CCee
Q psy8139 459 LHDTTALEDEKVEFTVQVEGIPT----PKVSWYKDG-----FEI---F----------------SSRRQRIVTD--NDIS 508 (1101)
Q Consensus 459 p~~~~v~~g~~v~L~C~~~g~p~----~~v~W~~~g-----~~~---~----------------~~~~~~~~~~--~~~~ 508 (1101)
|..+.+.+|++++|.|.+.+.+. ..+.|++.. ..+ . ...++.+... .+..
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 45667899999999999987663 489999832 111 1 1234544432 4456
Q ss_pred EEEEeecCCCCCEEEEEEEEeCCCc-------------eEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEEEEE
Q psy8139 509 TLIIHQAALMDEGEIKCTATNRAGH-------------SITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKLKVS 571 (1101)
Q Consensus 509 ~l~I~~l~~~d~g~Y~C~a~n~~g~-------------~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l~c~ 571 (1101)
+|.|.+++.+|+|.|.|.+.+..+. ......|.|.. +|.+...+. ...+..|..+.|.|.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~---~~~~~~g~~v~l~C~ 163 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAP---SSKSTSGGTAALGCL 163 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECC---CCCC--TTEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECC---ChhhccCCcEEEEEE
Confidence 8999999999999999999876320 11123566642 233321111 112345899999999
Q ss_pred Eee-cCC-CeeEEEECCeecCC---------CCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEEE
Q psy8139 572 MAG-MPP-PTARWLHNGEPLTS---------GGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLVT 637 (1101)
Q Consensus 572 ~~g-~p~-~~v~W~~~g~~l~~---------~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l~ 637 (1101)
+.+ .|. ..+.|.+++..+.. ++.+.+ .+.|.|......+ |.|+|.|.|..+.......+.
T Consensus 164 ~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 164 VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp EEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE-----EEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EeeEeCCCeEEEEEECCccCceEecCceECCCCCEEE-----EEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 998 453 35889998864421 112221 3468888888778 999999999887655544443
No 473
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=5e-10 Score=103.76 Aligned_cols=97 Identities=22% Similarity=0.350 Sum_probs=82.5
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeec-CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFS-SRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~-~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
..+|.|...|.++.+..|++++|.|.+.|.|.+.+.|++++..+.. ..++.+...+ +|.|.++...|+|.|+|.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEE
Confidence 3678888888999999999999999999999999999999987764 3455544433 89999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCccc
Q psy8139 529 NRAGHSITKARLRLEAPPTIR 549 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~~ 549 (1101)
|..|.....+.|.|..++...
T Consensus 83 n~~g~~~~~~~l~V~~~~~p~ 103 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFGVPV 103 (118)
T ss_dssp CSSCEEEEECCEEEECCSCCC
T ss_pred cCCCcEEEEEEEEEEeCCCCc
Confidence 999998888888888776543
No 474
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.03 E-value=3.5e-10 Score=117.36 Aligned_cols=124 Identities=17% Similarity=0.173 Sum_probs=87.5
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEec-cCCC-e
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEG-IPTP-K 483 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g-~p~~-~ 483 (1101)
.+|.|.++++.|+|.|+|.|.|..|.... ....+.+.. ...+|.+...+....+..|+.++|.|.+.| .|.+ .
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~----~~~~l~V~~-~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~ 145 (213)
T 3d9a_L 71 FTLSINSVETEDFGMYFCQQSNSWPYTFG----GGTKLEIKR-ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN 145 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEEC----CCEEEEECC-CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEECCCChhhCEEEEEeeecCCcceeC----CCEEEEEec-CCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceE
Confidence 48999999999999999999987663221 123344432 233676665444444557999999999987 5665 8
Q ss_pred EEEEECCEEeecCCcEE--EEec-CC----eeEEEEeecCCCCCEEEEEEEEeCCCce
Q psy8139 484 VSWYKDGFEIFSSRRQR--IVTD-ND----ISTLIIHQAALMDEGEIKCTATNRAGHS 534 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~--~~~~-~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~ 534 (1101)
++|+++|..+....... .... ++ .+.|.|.++...|+|.|+|.|.|.....
T Consensus 146 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 146 VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp EEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred EEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 99999999876541111 1111 11 2489999999999999999999987654
No 475
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.03 E-value=3e-09 Score=108.33 Aligned_cols=115 Identities=15% Similarity=0.124 Sum_probs=79.9
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCC-eEEEEEEEecc-CC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDE-KVEFTVQVEGI-PT 481 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~-~v~L~C~~~g~-p~ 481 (1101)
.+.+|.|.+++..|+|.|+|.|.|..|... ..+.+.+... +..|.+...+ .....|. +++|.|.+.|. |.
T Consensus 68 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~-----~~~~L~V~~~-~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~ 139 (193)
T 2if7_A 68 QSYSLQLSNLKMEDTGSYRAQISTKTSAKL-----SSYTLRILRQ-LRNIQVTNHS--QLFQNMTCELHLTCSVEDADDN 139 (193)
T ss_dssp TTCCEEECSCCGGGCEEEEEEEECSSCEEE-----EEEEEEEECC-CEEEEEEECC--C---CSSEEEEEEEEEESCCTT
T ss_pred CCeEEEECCCCcccCceEEEEEEecCCCeE-----EEEEEEEEcc-CCCCeEecCc--eeecCCCceEEEEEEEecCCCc
Confidence 357899999999999999999999876532 2344554321 2224444333 1233455 89999999985 58
Q ss_pred CeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCC-CCEEEEEEEEeCCCceEEE
Q psy8139 482 PKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALM-DEGEIKCTATNRAGHSITK 537 (1101)
Q Consensus 482 ~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~-d~g~Y~C~a~n~~g~~~~s 537 (1101)
|.++|+++|..+... . .|.|...... |.|.|+|.|.|..|..+..
T Consensus 140 p~i~W~~~g~~l~~~---------~--~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 140 VSFRWEALGNTLSSQ---------P--NLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp CEEEEEETTEEEESS---------S--EEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred eEEEEEeCCEEcCCC---------C--eEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 899999999865322 2 5666554444 8999999999999887543
No 476
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=3.6e-10 Score=103.21 Aligned_cols=99 Identities=30% Similarity=0.498 Sum_probs=84.5
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEE-ecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIV-TDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~-~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
..+|.|...|.++.+..|++++|.|.+.|.|.+.+.|++++..+......... ..++...|.|.++...|+|.|+|.|.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 36788888899999999999999999999999999999999887665544433 33445689999999999999999999
Q ss_pred eCCCceEEEEEEeeccCCcc
Q psy8139 529 NRAGHSITKARLRLEAPPTI 548 (1101)
Q Consensus 529 n~~g~~~~s~~l~V~~~p~~ 548 (1101)
|..|.....+.|.|..+|..
T Consensus 87 n~~g~~~~~~~l~V~~~p~~ 106 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAKESG 106 (110)
T ss_dssp CSSCEEEECCEEEEECCCCS
T ss_pred CCCCEEEEEEEEEEeCCCCC
Confidence 99999888888999877643
No 477
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.03 E-value=1.1e-09 Score=101.93 Aligned_cols=102 Identities=28% Similarity=0.513 Sum_probs=80.2
Q ss_pred eeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecC-CCceEEcCcc-ccccceEEEcCcc
Q psy8139 337 LYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTG-SPYWVRASPH-MVEDTELMVSGLE 414 (1101)
Q Consensus 337 ~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~-~~~w~~~~~~-~~~~~~l~i~~L~ 414 (1101)
+......+|.+|..+.+. .++.++++|+|.++ .+++.+|.+|.|+++..+ ...|...... ......++|.+|.
T Consensus 10 ~~~~~~~~P~~P~~~~~~----~~~~~sv~l~W~p~-~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~ 84 (121)
T 1x4z_A 10 PDHGRLSPPEAPDRPTIS----TASETSVYVTWIPR-GNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLE 84 (121)
T ss_dssp CCSSSCCCCCCCCCCEEE----ECCSSEEEEECCCC-CCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCC
T ss_pred eccCcCCCCccCCCCEEE----EccCCEEEEEEECC-CCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCC
Confidence 444556677777777663 67789999999965 577889999999998876 5678765433 3456789999999
Q ss_pred CCccEEEEEEEEecCCCCCCCCCCcceEE
Q psy8139 415 PGWRYQFRITAENVVGFSEPGPLSEPLTV 443 (1101)
Q Consensus 415 p~d~y~y~c~A~n~~G~~~~s~~s~~vtv 443 (1101)
+++.|.|+|.|.|..|.+.++..+..+++
T Consensus 85 p~t~Y~frV~A~n~~G~s~~S~~~~~v~~ 113 (121)
T 1x4z_A 85 KGISYKFRVRALNMLGESEPSAPSRPYVV 113 (121)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCCCCEEC
T ss_pred CCCEEEEEEEEEcCCCcCCCcCCCCCEEc
Confidence 99999999999999999988876655543
No 478
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.02 E-value=8.3e-10 Score=114.47 Aligned_cols=121 Identities=17% Similarity=0.162 Sum_probs=86.9
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEec-cCCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEG-IPTPK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g-~p~~~ 483 (1101)
..+|.|.++++.|+|.|+|.|.|..+.... .+....+.+.. +..+|.+...+....+..|+.++|.|.+.+ .|.+.
T Consensus 70 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~--~~~~~~l~V~~-~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~ 146 (213)
T 3nl4_L 70 DFTLTISDLECADAATYYCQSTYENPTYVS--FGGGTEVGVKG-DPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVT 146 (213)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCSSTTTCE--ECCCEEEEEEC-CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCE
T ss_pred EEEEEECCCChHHCEEEEEecCCCCceeEE--eCCCeEEEEeC-CCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcE
Confidence 357999999999999999999997763111 12223444433 456777766555556678999999999998 89999
Q ss_pred EEEEECCEEeecCCcEEEE---ecCC----eeEEEEeecCCCCCEEEEEEEE
Q psy8139 484 VSWYKDGFEIFSSRRQRIV---TDND----ISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~---~~~~----~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
++|+++|..+......... ..++ .+.|.|.++..+|.|.|+|.|.
T Consensus 147 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 147 VTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred EEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 9999999887532100000 0011 2479999999999999999998
No 479
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.02 E-value=2e-09 Score=97.06 Aligned_cols=82 Identities=21% Similarity=0.227 Sum_probs=61.3
Q ss_pred cCCCCCCccEEEEecCCeEEEEeecCCCCCCcccceeEEEEEcCCCCCCCCcccCCCCCCCCceEEEEeeCCCCCCCCCc
Q psy8139 640 DRPLPPGKAKVVMTLGKSVTLSWSEPEDDGGCKIGNYIVEYFRPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPV 719 (1101)
Q Consensus 640 ~~P~~P~~~~~~~~~~~sv~lsW~~p~~~~g~~i~~Y~v~~~~~~~~p~~p~~~~~~~~~~~~si~l~W~pP~~~~~~~i 719 (1101)
.+|.+|.++.+..++.+++.|+|.+|. +.+
T Consensus 6 t~p~~P~~l~v~~~~~~sv~lsW~~p~--------------------------------------------------~~i 35 (105)
T 2cum_A 6 SGLEAPRDLEAKEVTPRTALLTWTEPP--------------------------------------------------VRP 35 (105)
T ss_dssp TTCCCCEEEEEESCCSSCEEEEEECCS--------------------------------------------------SCC
T ss_pred cCCCCCCceEEEeccCCEEEEEEcCCC--------------------------------------------------Ccc
Confidence 467777777777777777777776542 246
Q ss_pred ceEEEEEEeCCCCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCC
Q psy8139 720 LGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEP 773 (1101)
Q Consensus 720 ~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 773 (1101)
.+|.|.|+..++ .|..+. .....++++|.+|.|++.|.|+|.|.|..|.|.+
T Consensus 36 ~~Y~i~y~~~~~-~~~~~~-~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~ 87 (105)
T 2cum_A 36 AGYLLSFHTPGG-QTQEIL-LPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPP 87 (105)
T ss_dssp SEEEEEEECTTS-CEEEEE-ECSSCSEEEECSCCTTCEEEEEEEEEBTTBCCCC
T ss_pred ceEEEEEEeCCC-ceEEEE-ECCCccEEEECCCCCCCEEEEEEEEEeCCcccCC
Confidence 788888876554 455442 2367789999999999999999999999998765
No 480
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.02 E-value=3.9e-09 Score=112.99 Aligned_cols=138 Identities=9% Similarity=0.123 Sum_probs=93.5
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccC----------------CCCCCeeeecCceeEEccC
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRS----------------PAAAPSFIRALHDTTALED 467 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~----------------~~~~P~~~~~p~~~~v~~g 467 (1101)
...+|.|.++++.|+|.|.|.|.|..+... ......+.+.+... ...+|.+...|..+.+.+|
T Consensus 74 ~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G 152 (256)
T 3tf7_C 74 SSFHLRKASVHRSDSAVYFCAVSAKGTGSK-LSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTG 152 (256)
T ss_dssp TEEEEEESSCCGGGCSEEEEEEECTTCTTC-EEECCCEEEEEEC---------------------CCEEESCSEEEEETT
T ss_pred CEEEEEECCCCcccCEEEEEEEecCCCccc-eEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCC
Confidence 345799999999999999999999765321 11122344444431 3456778888889999999
Q ss_pred CeEEEEEEEeccCCCeEEEEECC--E---Eee------------cCCcEEEEe-cCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 468 EKVEFTVQVEGIPTPKVSWYKDG--F---EIF------------SSRRQRIVT-DNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 468 ~~v~L~C~~~g~p~~~v~W~~~g--~---~~~------------~~~~~~~~~-~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
++++|.|.+.+. .+.+.|++.. . .+. ...++.+.. .....+|+|.++..+|+|.|+|.|.|
T Consensus 153 ~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 231 (256)
T 3tf7_C 153 ENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSD 231 (256)
T ss_dssp CCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEE
T ss_pred CcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecC
Confidence 999999999887 6799999832 1 111 012333322 23455899999999999999999999
Q ss_pred CCCceEE--EEEEeec
Q psy8139 530 RAGHSIT--KARLRLE 543 (1101)
Q Consensus 530 ~~g~~~~--s~~l~V~ 543 (1101)
..|.... ...|.|.
T Consensus 232 ~~g~~~fG~gt~l~v~ 247 (256)
T 3tf7_C 232 APGQLYFGEGSKLTVL 247 (256)
T ss_dssp ETTEEEECCCEEEEEE
T ss_pred CCCccEECCCeEEEEE
Confidence 8775432 2445554
No 481
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=99.02 E-value=1.2e-09 Score=98.35 Aligned_cols=56 Identities=14% Similarity=0.203 Sum_probs=43.4
Q ss_pred CcceEEEEEEeCC-CCCceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCCC
Q psy8139 718 PVLGYLVEHRRTG-SPYWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEPG 774 (1101)
Q Consensus 718 ~i~~Y~V~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 774 (1101)
+|.+|.|.|...+ ...|.... ..+..++++|.+|.|++.|.|+|.|.|..|.|.++
T Consensus 29 ~i~~Y~v~y~~~~~~~~~~~~~-v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~ 85 (104)
T 2rb8_A 29 PVDGFELTYGIKDVPGDRTTID-LTEDENQYSIGNLKPDTEYEVSLISRRGDMSSNPA 85 (104)
T ss_dssp CCSEEEEEEEETTCTTCCEEEE-EETTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred ccceEEEEEEECcCCCceEEEE-cCCCcCEEEeCCCCCCCEEEEEEEEEeCCccCCCE
Confidence 4778888887654 23344332 23677899999999999999999999999997663
No 482
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.02 E-value=2.4e-09 Score=113.78 Aligned_cols=170 Identities=12% Similarity=0.144 Sum_probs=107.1
Q ss_pred cCceeEEccCCeEEEEEEEec--cCCCeEEEEEC--CE---Ee---e-----------cCCcEEEEec--CCeeEEEEee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEG--IPTPKVSWYKD--GF---EI---F-----------SSRRQRIVTD--NDISTLIIHQ 514 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g--~p~~~v~W~~~--g~---~~---~-----------~~~~~~~~~~--~~~~~l~I~~ 514 (1101)
.|..+.+.+|++++|.|.+.+ .+...+.|++. +. .+ . ...++.+..+ .+..+|+|.+
T Consensus 5 ~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 84 (248)
T 3u2s_H 5 ESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNS 84 (248)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred cCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 455678999999999999975 34467999873 11 11 0 1245555432 3456899999
Q ss_pred cCCCCCEEEEEEEEeCCC----------------------ceEEEEEEeecc----CCccccCCCCCCCeEEeeCCEEEE
Q psy8139 515 AALMDEGEIKCTATNRAG----------------------HSITKARLRLEA----PPTIRLPKQYEDGLLFEMGEIIKL 568 (1101)
Q Consensus 515 l~~~d~g~Y~C~a~n~~g----------------------~~~~s~~l~V~~----~p~~~~~~~~~~~~~v~~g~~~~l 568 (1101)
++.+|+|.|.|.+.+..+ .......|.|.. +|.+...+. ...+..|..+.|
T Consensus 85 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~---~~~~~~g~~~~L 161 (248)
T 3u2s_H 85 LRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAP---SSKSTSGGTAAL 161 (248)
T ss_dssp CCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECC---C------CEEEE
T ss_pred CCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCC---CccccCCCcEEE
Confidence 999999999999987421 111134566652 232221111 113446899999
Q ss_pred EEEEee-cC-CCeeEEEECCeecCC---------CCceEEEeecceEEEEEccCCCCCCeEEEEEEEeCCCCceeEEEE
Q psy8139 569 KVSMAG-MP-PPTARWLHNGEPLTS---------GGRYEITHTDRYLNLRISDARRADRGEYQAHGVNSLGEDVASFLV 636 (1101)
Q Consensus 569 ~c~~~g-~p-~~~v~W~~~g~~l~~---------~~~~~~~~~~~~~sl~i~~l~~~~~y~y~c~A~N~~G~~~~s~~l 636 (1101)
.|.+.+ .| .+.+.|.+++..+.. ++.+.+ .+.|.|......+ +.|+|.|.|..+.......+
T Consensus 162 ~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l 234 (248)
T 3u2s_H 162 GCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 234 (248)
T ss_dssp EEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE-----EEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEE-----EEEEEEChhhcCC-CeEEEEEEECCCCcceEEEE
Confidence 999997 44 567999998864321 122222 3467788777777 99999999987765544433
No 483
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.02 E-value=6.4e-09 Score=110.98 Aligned_cols=174 Identities=15% Similarity=0.223 Sum_probs=109.9
Q ss_pred eeecCceeEEccCCeEEEEEEEeccCCCeEEEEECC--E--E-ee------------cCCcEEEEe-cCCeeEEEEeecC
Q psy8139 455 FIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG--F--E-IF------------SSRRQRIVT-DNDISTLIIHQAA 516 (1101)
Q Consensus 455 ~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g--~--~-~~------------~~~~~~~~~-~~~~~~l~I~~l~ 516 (1101)
+...|..+.+..|++++|.|.+. .+.+.+.|++.. . . +. ...++.+.. ..+...|.|.++.
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 84 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQ 84 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCC
Confidence 45567788999999999999985 457899999842 1 1 11 123444432 1334589999999
Q ss_pred CCCCEEEEEEEEeCCC---ceEEEEEEeecc------CCccccCCCCCCCeEEeeCCEEEEEEEEeec-CC-CeeEEEEC
Q psy8139 517 LMDEGEIKCTATNRAG---HSITKARLRLEA------PPTIRLPKQYEDGLLFEMGEIIKLKVSMAGM-PP-PTARWLHN 585 (1101)
Q Consensus 517 ~~d~g~Y~C~a~n~~g---~~~~s~~l~V~~------~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g~-p~-~~v~W~~~ 585 (1101)
.+|+|.|.|.+.+..+ .......|.|.. +|.+...+. ....+..|..+.|.|.+.|. |. +.+.|+++
T Consensus 85 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~--~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 162 (252)
T 1oga_E 85 KNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEP--SEAEISHTQKATLVCLATGFYPDHVELSWWVN 162 (252)
T ss_dssp SCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECC--CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECC--ChhhhccCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 9999999999998621 111224566653 333321100 01112258899999999985 64 49999999
Q ss_pred CeecCCCCceE---E---E-eecc----eEEEEEccCCCC-CCeEEEEEEEeCCCCce
Q psy8139 586 GEPLTSGGRYE---I---T-HTDR----YLNLRISDARRA-DRGEYQAHGVNSLGEDV 631 (1101)
Q Consensus 586 g~~l~~~~~~~---~---~-~~~~----~~sl~i~~l~~~-~~y~y~c~A~N~~G~~~ 631 (1101)
|..+..+.... . . ..++ .+.|.|...... +.+.|+|.|.|..+...
T Consensus 163 g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 163 GKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp TEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 98876432211 0 0 0111 234666655443 57899999999876543
No 484
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.02 E-value=5.5e-10 Score=101.30 Aligned_cols=87 Identities=24% Similarity=0.390 Sum_probs=69.0
Q ss_pred CCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCccCCccEEEEEEE
Q psy8139 346 GPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLEPGWRYQFRITA 425 (1101)
Q Consensus 346 ~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~p~d~y~y~c~A 425 (1101)
.+|.+|.++.. ..+.++++|+|.++ .+||++|++|.|+++..+...|...........+++|.+|.|++.|.|+|.|
T Consensus 7 ~~P~pP~~~~~--~~~~~sv~L~W~p~-~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A 83 (114)
T 2kbg_A 7 REPSPPSIHGQ--PSSGKSFKLSITKQ-DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITA 83 (114)
T ss_dssp CCCCSCCEECC--BCSTTCEEEEECCC-CCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEE
T ss_pred CCccCCccccc--ccCCCEEEEEEECC-CCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEE
Confidence 44555555432 25789999999976 6899999999999998766666544434456678999999999999999999
Q ss_pred EecCCCCCCC
Q psy8139 426 ENVVGFSEPG 435 (1101)
Q Consensus 426 ~n~~G~~~~s 435 (1101)
.|..|.+.++
T Consensus 84 ~N~~G~s~pS 93 (114)
T 2kbg_A 84 ANRLGYSEPT 93 (114)
T ss_dssp ECTTSCEEEE
T ss_pred EeCCcCcCCc
Confidence 9999998765
No 485
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.01 E-value=2.2e-09 Score=95.98 Aligned_cols=91 Identities=25% Similarity=0.402 Sum_probs=79.8
Q ss_pred CCCeeeecCce-eEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 451 AAPSFIRALHD-TTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 451 ~~P~~~~~p~~-~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
.+|.|...+.+ ..+..|+++.|.|.+. .|.+.+.|++++..+....++.+...+....|.|.++...|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 46778777776 6788999999999998 6899999999999888777888887777789999999999999999999
Q ss_pred CCCceEEEEEEeeccCC
Q psy8139 530 RAGHSITKARLRLEAPP 546 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p 546 (1101)
|....++.|.|..+|
T Consensus 83 --g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 --GDEKCSTELFVRSGP 97 (100)
T ss_dssp --TTEEEEEEEEECCSC
T ss_pred --CCceEEEEEEEecCC
Confidence 677778889998876
No 486
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.01 E-value=7.9e-10 Score=97.84 Aligned_cols=88 Identities=15% Similarity=0.305 Sum_probs=75.7
Q ss_pred CCCCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 450 AAAPSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 450 ~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
..+|.+...|.+..+..|+++.|.|.+.|.| +.+.|+++|..+....++.+. + ..|.|.++...|+|.|+|.|.|
T Consensus 7 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~--~--~~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT--G--EEVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp SCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC--S--SEEEESSCCGGGSEEEEEEEEE
T ss_pred CCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe--C--CEEEECCCChHHCEEEEEEecc
Confidence 4677888888899999999999999999998 799999999888766665543 2 3899999999999999999999
Q ss_pred CCCceEEEEEEee
Q psy8139 530 RAGHSITKARLRL 542 (1101)
Q Consensus 530 ~~g~~~~s~~l~V 542 (1101)
..|.....+.|.|
T Consensus 82 ~~g~~~~~~~l~V 94 (95)
T 2ckn_A 82 PSGSDTTYFSVNV 94 (95)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 9998877777766
No 487
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.01 E-value=1.6e-09 Score=97.59 Aligned_cols=91 Identities=30% Similarity=0.425 Sum_probs=77.9
Q ss_pred CCeeeecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCC--cEEEEecCCeeEEEEeecCCCCCEEEEEEEEe
Q psy8139 452 APSFIRALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSR--RQRIVTDNDISTLIIHQAALMDEGEIKCTATN 529 (1101)
Q Consensus 452 ~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~--~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n 529 (1101)
|+.|...+.++.+..|++++|.|.+.+ |.+.+.|++++..+.... ++.+...+....|.|.++...|+|.|+|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 444777888999999999999999988 668999999999988776 66887777778999999999999999999977
Q ss_pred CCCceEEEEEEeeccCCc
Q psy8139 530 RAGHSITKARLRLEAPPT 547 (1101)
Q Consensus 530 ~~g~~~~s~~l~V~~~p~ 547 (1101)
...++.|.|..+|.
T Consensus 86 ----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 86 ----GQSSAKLSVDLKSG 99 (103)
T ss_dssp ----EEEEEEEEEECCCS
T ss_pred ----CcEEEEEEEeCCCC
Confidence 46677888887664
No 488
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.01 E-value=4.1e-10 Score=115.85 Aligned_cols=126 Identities=15% Similarity=0.196 Sum_probs=81.8
Q ss_pred ccceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEecc---------------------------CCCCCCeee
Q psy8139 404 EDTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR---------------------------SPAAAPSFI 456 (1101)
Q Consensus 404 ~~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~---------------------------~~~~~P~~~ 456 (1101)
...+|.|.+++..|+|.|+|.+.+.. +..+.+.+.. ....+|.+.
T Consensus 47 ~~~~L~i~~v~~~DsG~Y~C~~~~~~--------s~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (204)
T 1sy6_A 47 DKKKWNLGSNAKDPRGMYQCKGSQNK--------SKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGIT 118 (204)
T ss_dssp SCCCEEEEEGGGCCEEEEEEESSSSC--------CCCEEEEEEC------------------------------------
T ss_pred CCCeEEeCCCCcCCCEEEEEEecCCC--------CeeEEEEEEEecccccccccccccccccccccccccccccccccee
Confidence 34679999999999999999964311 2224444330 000123333
Q ss_pred ecCceeEEccCCeEEEEEEEeccCCCeEEEEECCEEeecCC-cEEEEecCCeeEEEEeec-CCCCCEEEEEEEEeCCCce
Q psy8139 457 RALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSR-RQRIVTDNDISTLIIHQA-ALMDEGEIKCTATNRAGHS 534 (1101)
Q Consensus 457 ~~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~-~~~~~~~~~~~~l~I~~l-~~~d~g~Y~C~a~n~~g~~ 534 (1101)
..|. ....+|++++|.|. +.|.|.+.|++++..+.... ...+...+ ..|.|.++ ...|+|.|+|.|.|..|..
T Consensus 119 ~~p~-~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~--~~L~I~~v~~~~D~G~Y~C~A~N~~g~~ 193 (204)
T 1sy6_A 119 QTPY-KVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDE--DHLSLKEFSELEQSGYYVCYPRGSKPED 193 (204)
T ss_dssp CCCC-EEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEET--TEEEETTCCHHHHCEEEEEEETTSCGGG
T ss_pred cCCc-eeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCC--CEEEEeeCCccccCEEEEEEeccCCCCc
Confidence 2332 22348999999999 78889999999999875431 11122123 38999999 9999999999999999863
Q ss_pred -EEEEEEee
Q psy8139 535 -ITKARLRL 542 (1101)
Q Consensus 535 -~~s~~l~V 542 (1101)
+....|.+
T Consensus 194 ~s~~l~l~~ 202 (204)
T 1sy6_A 194 ANFYLYLRA 202 (204)
T ss_dssp SSCEEEEEE
T ss_pred eeEEEEEEE
Confidence 33334433
No 489
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.00 E-value=6.1e-10 Score=115.22 Aligned_cols=124 Identities=16% Similarity=0.137 Sum_probs=86.1
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEec-cCCC-e
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEG-IPTP-K 483 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g-~p~~-~ 483 (1101)
.+|.|.++++.|+|.|+|.|.|..|.... ....+.+.. ...+|.+...+....+..|+.++|.|.+.| .|.+ .
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~----~~~~l~V~~-~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~ 144 (210)
T 1lk3_L 70 FTLTIDPVEADDTAIYFCQQSWNGPLTFG----AGTKLELKR-ADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDIS 144 (210)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEEC----CCEEEEECC-CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEECCCCHHHCeEEEEEEEcCCCceeC----CCEEEEEcC-CCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceE
Confidence 48999999999999999999987653211 123344432 224676665544444558999999999987 4543 8
Q ss_pred EEEEECCEEeecC-Cc-EEEEec-CC----eeEEEEeecCCCCCEEEEEEEEeCCCce
Q psy8139 484 VSWYKDGFEIFSS-RR-QRIVTD-ND----ISTLIIHQAALMDEGEIKCTATNRAGHS 534 (1101)
Q Consensus 484 v~W~~~g~~~~~~-~~-~~~~~~-~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~~ 534 (1101)
+.|+++|..+... .. ...... ++ .+.|.|.++...|+|.|+|.|.|.....
T Consensus 145 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 145 VKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp EEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 9999999987644 11 011111 11 2379999999999999999999976543
No 490
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.00 E-value=7.4e-10 Score=103.55 Aligned_cols=102 Identities=26% Similarity=0.399 Sum_probs=77.0
Q ss_pred eeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEe---cCCCceEEcCcc--ccccceEEEcC
Q psy8139 338 YCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRR---TGSPYWVRASPH--MVEDTELMVSG 412 (1101)
Q Consensus 338 ~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~---~~~~~w~~~~~~--~~~~~~l~i~~ 412 (1101)
.+....++.+|++|..+.+. .++.++++|+|.+|. +++.+|++|.|+++. .....|...... ......++|.+
T Consensus 8 ~~~~~~~~~~P~~P~~l~~~-~~~~~sv~l~W~p~~-~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~ 85 (124)
T 1wis_A 8 TISSGVPPELPGPPTNLGIS-NIGPRSVTLQFRPGY-DGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPD 85 (124)
T ss_dssp CCCSCCCCCCCCCCEEEEEE-SCCSSCEEEEEECCC-CCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECS
T ss_pred cccccCCCCCCccCCCCEEE-EecCCEEEEEEECCC-CCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCC
Confidence 33444455566666665444 778999999998874 777899999999987 356678764322 34567899999
Q ss_pred ccCCccEEEEEEEEecCCCCCCCCCCcce
Q psy8139 413 LEPGWRYQFRITAENVVGFSEPGPLSEPL 441 (1101)
Q Consensus 413 L~p~d~y~y~c~A~n~~G~~~~s~~s~~v 441 (1101)
|.|++.|.|+|.|.|..|.+.++..+..+
T Consensus 86 L~p~t~Y~frV~A~N~~G~s~~S~~~~~~ 114 (124)
T 1wis_A 86 LNPFTCYSFRMRQVNIVGTSPPSQPSRKI 114 (124)
T ss_dssp CCTTSEECCCCEEECSSCBCCCCCCCCCE
T ss_pred CCCCCEEEEEEEEEECCccCCCcCCccce
Confidence 99999999999999999999887654433
No 491
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=99.00 E-value=1.7e-09 Score=96.21 Aligned_cols=56 Identities=21% Similarity=0.291 Sum_probs=43.4
Q ss_pred CCcceEEEEEEeCCCC-CceeecccccCccEEEEcCCCCCceEEEEEEEEcCCccCCC
Q psy8139 717 SPVLGYLVEHRRTGSP-YWVRASPHMVEDTELMVSGLEPGWRYQFRITAENVVGFSEP 773 (1101)
Q Consensus 717 ~~i~~Y~V~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 773 (1101)
++|.+|.|.|+..++. .|.... .....++++|.+|.|++.|.|+|.|.|..|.|+|
T Consensus 27 ~~i~~Y~v~y~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p 83 (98)
T 3teu_A 27 ATITGYRITYTPSNGPGEPKELT-VPPSSTSVTITGLTPGVEYVVSVYALKDNQESPP 83 (98)
T ss_dssp SCCSEEEEEEEETTSCSCCEEEE-ECTTCSEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred CcccEEEEEEEECCCCCceEEEE-cCCCcCEEEecCCCCCCEEEEEEEEEeCCCCCCC
Confidence 3577888888865443 343333 2367899999999999999999999999999766
No 492
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.00 E-value=2.6e-09 Score=110.71 Aligned_cols=126 Identities=10% Similarity=0.137 Sum_probs=84.2
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEecc----C
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGI----P 480 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~----p 480 (1101)
+.+|.|.++++.|+|.|.|.+.+..+.. .+..+..+.+.+... ..+|.+.. +.. +.+|+.++|.|.+.+. |
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~~~~l~V~~~-~~~p~i~~-~~~--~~~G~~v~L~C~~~~~~~~~p 155 (214)
T 2zg1_A 81 NCSLSIGDARMEDTGSYFFRVERGRDVK-YSYQQNKLNLEVTAL-IEKPDIHF-LEP--LESGRPTRLSCSLPGSCEAGP 155 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEE-EECCSSCEEEEEECC-CCCCEEC---CC--CCTTCCEEEEEECTTCCSCSS
T ss_pred eEEEEEccCCHhhCceEEEEEEcCCCce-eeecCCceEEEEecC-CCCCceec-Ccc--ccCCCeEEEEEEeccCCCCCC
Confidence 4579999999999999999999875321 111123455555432 23555543 222 6789999999999774 8
Q ss_pred CCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEEEe
Q psy8139 481 TPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSITKARLR 541 (1101)
Q Consensus 481 ~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~ 541 (1101)
.|.++|++++....... ....+.|.|..+...|.|.|+|.|.|..+....+..+.
T Consensus 156 ~p~v~W~~~~~~~~~~~------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 156 PLTFSWTGNALSPLDPE------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp CCEEEEESSTTSSSCSS------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred CceEEEeCCCCccCCCC------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 89999999885432211 12334899999999999999999999865544443333
No 493
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.00 E-value=2.8e-09 Score=116.45 Aligned_cols=143 Identities=11% Similarity=0.035 Sum_probs=95.1
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEecc------------CCCCCCeeeecCceeEEccCCeEEE
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQR------------SPAAAPSFIRALHDTTALEDEKVEF 472 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~------------~~~~~P~~~~~p~~~~v~~g~~v~L 472 (1101)
..+|+|.++++.|+|.|.|.+.|..+............+.+.. ....++.+...|..+.+.+|++++|
T Consensus 100 ~~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L 179 (291)
T 2gki_A 100 TAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTM 179 (291)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEE
T ss_pred EEEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEE
Confidence 3579999999999999999999875211110111223444433 1112445566677888999999999
Q ss_pred EEEEeccCCC------eEEEEECC--E---Eeec---------CCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCC
Q psy8139 473 TVQVEGIPTP------KVSWYKDG--F---EIFS---------SRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAG 532 (1101)
Q Consensus 473 ~C~~~g~p~~------~v~W~~~g--~---~~~~---------~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g 532 (1101)
.|.+.+.|.+ .+.|+++. . .+.. ..++.....+...+|+|.++..+|+|.|+|.|.|...
T Consensus 180 ~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 259 (291)
T 2gki_A 180 SCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHM 259 (291)
T ss_dssp EEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCc
Confidence 9999988776 89999952 2 1111 3455555455667899999999999999999998643
Q ss_pred ceEE-EEEEeeccCCc
Q psy8139 533 HSIT-KARLRLEAPPT 547 (1101)
Q Consensus 533 ~~~~-s~~l~V~~~p~ 547 (1101)
.... ...|.|...+.
T Consensus 260 ~~fg~gt~l~v~~~~~ 275 (291)
T 2gki_A 260 YTFGSGTKLEIKHHHH 275 (291)
T ss_dssp EEECCCEEEEEECC--
T ss_pred eEEcCCEEEEEEeeEc
Confidence 2222 24566655443
No 494
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.00 E-value=7.2e-10 Score=116.72 Aligned_cols=173 Identities=17% Similarity=0.271 Sum_probs=101.3
Q ss_pred CeeeecCceeE-EccCCeEEEEEEEeccC----CCeEEEEECCEEeecCCcE--EEEecCC---eeEEEEeecCCCCCEE
Q psy8139 453 PSFIRALHDTT-ALEDEKVEFTVQVEGIP----TPKVSWYKDGFEIFSSRRQ--RIVTDND---ISTLIIHQAALMDEGE 522 (1101)
Q Consensus 453 P~~~~~p~~~~-v~~g~~v~L~C~~~g~p----~~~v~W~~~g~~~~~~~~~--~~~~~~~---~~~l~I~~l~~~d~g~ 522 (1101)
+.++..|.... +..|..++|.|.+.|.+ ...|+|+++|..+...... ....++. .+.|.|......|.+.
T Consensus 24 ~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~ 103 (240)
T 4acp_A 24 SVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKE 103 (240)
T ss_dssp EEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCC
T ss_pred EEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCE
Confidence 33445555555 45699999999999864 3479999999887432100 0001111 1356676666667899
Q ss_pred EEEEEEeCCCceEEEEEE----eeccCCccccCCCCCCCeEEeeCCEEEEEEEEee-cCC-CeeEEEECCeecCCCCceE
Q psy8139 523 IKCTATNRAGHSITKARL----RLEAPPTIRLPKQYEDGLLFEMGEIIKLKVSMAG-MPP-PTARWLHNGEPLTSGGRYE 596 (1101)
Q Consensus 523 Y~C~a~n~~g~~~~s~~l----~V~~~p~~~~~~~~~~~~~v~~g~~~~l~c~~~g-~p~-~~v~W~~~g~~l~~~~~~~ 596 (1101)
|+|.|.+..+.......+ .+..+|.+...+.... ...|..+.|.|.+.+ .|. ..++|.++|..+.......
T Consensus 104 YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~---~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~ 180 (240)
T 4acp_A 104 YKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRD---ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATP 180 (240)
T ss_dssp EEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGG---GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECC
T ss_pred EEEEEEcCCCCccccccccccCCCCCCCEEEEECCChH---HhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccC
Confidence 999999987743333222 2334555433222111 113789999999998 454 4899999998875321111
Q ss_pred EEeecc-----eEEEEEccCCCCCCeEEEEEEEeCCC
Q psy8139 597 ITHTDR-----YLNLRISDARRADRGEYQAHGVNSLG 628 (1101)
Q Consensus 597 ~~~~~~-----~~sl~i~~l~~~~~y~y~c~A~N~~G 628 (1101)
....++ .+.|.+......+.+.|+|.+.|..-
T Consensus 181 ~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 181 PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 111111 23455554444568999999998643
No 495
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.99 E-value=3.4e-09 Score=95.22 Aligned_cols=83 Identities=19% Similarity=0.291 Sum_probs=69.2
Q ss_pred ccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEE--EecC---CeeEEEEeecCCCCCEEEEEEEEeCCCceEEEEE
Q psy8139 465 LEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRI--VTDN---DISTLIIHQAALMDEGEIKCTATNRAGHSITKAR 539 (1101)
Q Consensus 465 ~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~--~~~~---~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~ 539 (1101)
..+..+.|.|.+.|.|.|.++|+++|..+........ ...+ ..+.|.|.++...|+|.|+|.|.|..|....++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 4577899999999999999999999999887655322 1111 1346999999999999999999999999999999
Q ss_pred EeeccCCc
Q psy8139 540 LRLEAPPT 547 (1101)
Q Consensus 540 l~V~~~p~ 547 (1101)
|.|..+|.
T Consensus 94 l~V~~~P~ 101 (103)
T 1wwb_X 94 AHFMGWPG 101 (103)
T ss_dssp ECCSCCCC
T ss_pred EEECCCCC
Confidence 99988774
No 496
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.99 E-value=7.4e-10 Score=114.77 Aligned_cols=124 Identities=14% Similarity=0.158 Sum_probs=87.9
Q ss_pred ceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEEeccCCC--e
Q psy8139 406 TELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQVEGIPTP--K 483 (1101)
Q Consensus 406 ~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~~g~p~~--~ 483 (1101)
.+|.|.++++.|+|.|.|.|.|..+... +....+.+...+..+|.+...+....+..|+.++|.|.+.|.+++ .
T Consensus 73 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~----~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~ 148 (212)
T 1q0x_L 73 AALTITGAQTEDEAIYFCALWSNNKLVF----GGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVT 148 (212)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSSCEEE----CCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEECCCCccCCEEEEEEEecCchhhc----CCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeE
Confidence 4799999999999999999999765311 122445554333457777665544445679999999999885443 8
Q ss_pred EEEEECCEEeecCCcEE--EEecCC----eeEEEEeecCCCCCEEEEEEEEeCCCc
Q psy8139 484 VSWYKDGFEIFSSRRQR--IVTDND----ISTLIIHQAALMDEGEIKCTATNRAGH 533 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~--~~~~~~----~~~l~I~~l~~~d~g~Y~C~a~n~~g~ 533 (1101)
|+|+++|..+....... ....++ .+.|.|......|.|.|+|.|.|....
T Consensus 149 v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 149 VDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp EEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred EEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 99999999876442110 111111 236889999999999999999998654
No 497
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.99 E-value=2.6e-09 Score=106.13 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=86.3
Q ss_pred cceEEEcCccCCccEEEEEEEEecCCCCCCCCCCcceEEEeccCCCCCCeeeecCceeEEccCCeEEEEEEE-eccCCCe
Q psy8139 405 DTELMVSGLEPGWRYQFRITAENVVGFSEPGPLSEPLTVTYQRSPAAAPSFIRALHDTTALEDEKVEFTVQV-EGIPTPK 483 (1101)
Q Consensus 405 ~~~l~i~~L~p~d~y~y~c~A~n~~G~~~~s~~s~~vtv~~~~~~~~~P~~~~~p~~~~v~~g~~v~L~C~~-~g~p~~~ 483 (1101)
...+.+.+++..|.|.|+|.|.|..+ +..+.+.+.. +|.+.. +....+..|+++.|.|.+ .+.|.+.
T Consensus 50 ~~~~~~~~~~~~d~G~Y~C~~~~~~~-------s~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~ 117 (170)
T 3ry4_A 50 TQPSYRFKANNNDSGEYTCQTGQTSL-------SDPVHLTVLF----EWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVK 117 (170)
T ss_dssp CSSEEEEECCGGGCEEEEEEETTSBC-------CCCEEEEEEC----CSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEE
T ss_pred ccceEEEecccccCeEEEEEEeCCCc-------eEeEEEEEEC----CceEec-CCCceeecCCeEEEEEECCCCCCCce
Confidence 35678889999999999999986432 2345555542 333333 445678899999999999 4556689
Q ss_pred EEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEEeCCCceE-EEEEEee
Q psy8139 484 VSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTATNRAGHSI-TKARLRL 542 (1101)
Q Consensus 484 v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~n~~g~~~-~s~~l~V 542 (1101)
+.|+++|..+... .....|.|.++...|+|.|+|.|.|..|... ....|.|
T Consensus 118 ~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 118 VTFFQNGKSQKFS--------HLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEETTEEEEEE--------SSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEECCeEcccc--------CCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 9999999876421 1234899999999999999999999988532 2344444
No 498
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=3.9e-10 Score=104.82 Aligned_cols=103 Identities=24% Similarity=0.473 Sum_probs=84.0
Q ss_pred cceeeeccCCCCCCCCCcccCCCCCCCCCeeEEEEeCCCCCCCcCeeEEEEEEEecCCCceEEcCccccccceEEEcCcc
Q psy8139 335 TDLYCVIKKPPGPPGKPQLLPDSPSLDRDVFTIRWEPPEYDGGSPVLGYLVEHRRTGSPYWVRASPHMVEDTELMVSGLE 414 (1101)
Q Consensus 335 ~~~~~~v~~~p~~P~~p~~l~~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~l~i~~L~ 414 (1101)
..+.+.+.++|++|..+.+. .++.++++|+|.+|..+|+.+|.+|.|+++..+...|..... ......++|.+|.
T Consensus 8 ~~~~v~~~~~P~~P~~l~~~----~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~-~~~~~~~~v~~L~ 82 (120)
T 2yux_A 8 ASIDIQIIDRPGPPQIVKIE----DVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE-HYHRTSATITELV 82 (120)
T ss_dssp CCCCCCCCCCCCCCSCEEEE----EEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES-SCCSSCCEECCCC
T ss_pred EEEEEEeecCCCcCCCCEEE----EecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee-cCCcCEEEECCCC
Confidence 34666777778877776663 677899999999998788789999999999887778886643 2456789999999
Q ss_pred CCccEEEEEEEEecCCCCCCCCCCcceE
Q psy8139 415 PGWRYQFRITAENVVGFSEPGPLSEPLT 442 (1101)
Q Consensus 415 p~d~y~y~c~A~n~~G~~~~s~~s~~vt 442 (1101)
|++.|.|+|.|.|..|.+.++..+..+.
T Consensus 83 p~t~Y~frV~A~n~~G~s~~S~~s~~~~ 110 (120)
T 2yux_A 83 IGNEYYFRVFSENMCGLSEDATMTKESA 110 (120)
T ss_dssp SSEEEEEEECCCSSSCSCSSCEECSSCE
T ss_pred CCCEEEEEEEEeeCCcCCCCccCcCCce
Confidence 9999999999999999998886555444
No 499
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.99 E-value=8.7e-10 Score=104.65 Aligned_cols=86 Identities=23% Similarity=0.325 Sum_probs=73.4
Q ss_pred cCceeEEccCCeEEEEEEEeccCCCeEEEEECC----------------------------EEe-ecCCcEEEEecCCee
Q psy8139 458 ALHDTTALEDEKVEFTVQVEGIPTPKVSWYKDG----------------------------FEI-FSSRRQRIVTDNDIS 508 (1101)
Q Consensus 458 ~p~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g----------------------------~~~-~~~~~~~~~~~~~~~ 508 (1101)
.|.++.+..|+++.|.|.+.|.|.|.|+|++++ ..+ ....++.+...+..+
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s 103 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS 103 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE
Confidence 367889999999999999999999999999988 444 234566666666677
Q ss_pred EEEEeecCCCCCEEEEEEEEeCCCceEEEEEEeec
Q psy8139 509 TLIIHQAALMDEGEIKCTATNRAGHSITKARLRLE 543 (1101)
Q Consensus 509 ~l~I~~l~~~d~g~Y~C~a~n~~g~~~~s~~l~V~ 543 (1101)
.|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 89999999999999999999999988888877774
No 500
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.99 E-value=8.9e-10 Score=96.11 Aligned_cols=87 Identities=21% Similarity=0.344 Sum_probs=70.1
Q ss_pred CCCeeeecCcee--EEccCCeEEEEEEEeccCCCeEEEEECCEEeecCCcEEEEecCCeeEEEEeecCCCCCEEEEEEEE
Q psy8139 451 AAPSFIRALHDT--TALEDEKVEFTVQVEGIPTPKVSWYKDGFEIFSSRRQRIVTDNDISTLIIHQAALMDEGEIKCTAT 528 (1101)
Q Consensus 451 ~~P~~~~~p~~~--~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~l~I~~l~~~d~g~Y~C~a~ 528 (1101)
.||.+..++.+. .+..|+++.|.|.+.+ |.+.++|+++|..+..+.++.+...++...|.|.++...|+|.|+|.|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 355555555554 4468999999999866 8889999999999988888888888888899999999999999999985
Q ss_pred eCCCceEEEEEEee
Q psy8139 529 NRAGHSITKARLRL 542 (1101)
Q Consensus 529 n~~g~~~~s~~l~V 542 (1101)
| ...++.|.|
T Consensus 82 n----~~~~~~ltV 91 (91)
T 2lvc_A 82 D----ECAYFTVTI 91 (91)
T ss_dssp S----CEEEEEEEC
T ss_pred c----eEEEEEEEC
Confidence 4 345555544
Done!