Query psy8141
Match_columns 480
No_of_seqs 241 out of 1453
Neff 5.9
Searched_HMMs 46136
Date Fri Aug 16 19:40:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8141.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8141hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1096|consensus 100.0 1E-115 2E-120 924.3 22.5 386 6-461 374-764 (768)
2 PLN03055 AMP deaminase; Provis 100.0 5E-107 1E-111 870.4 32.5 386 6-462 205-595 (602)
3 PLN02768 AMP deaminase 100.0 3E-106 7E-111 876.2 32.6 387 5-462 437-828 (835)
4 cd01319 AMPD AMP deaminase (AM 100.0 2E-106 4E-111 856.5 29.3 377 6-453 115-496 (496)
5 TIGR01429 AMP_deaminase AMP de 100.0 5E-106 1E-110 865.4 30.0 382 5-456 225-611 (611)
6 PTZ00310 AMP deaminase; Provis 100.0 1E-102 3E-107 885.1 32.1 386 7-465 901-1291(1453)
7 PTZ00310 AMP deaminase; Provis 100.0 6.3E-94 1.4E-98 814.0 31.8 387 4-464 261-660 (1453)
8 COG1816 Add Adenosine deaminas 100.0 9.6E-54 2.1E-58 436.6 20.7 288 3-422 7-338 (345)
9 cd01321 ADGF Adenosine deamina 100.0 1.4E-50 3E-55 416.9 23.8 291 2-421 19-341 (345)
10 PF00962 A_deaminase: Adenosin 100.0 4.7E-50 1E-54 408.2 21.2 289 7-420 2-331 (331)
11 PTZ00124 adenosine deaminase; 100.0 1.7E-49 3.6E-54 410.7 23.3 291 3-421 31-361 (362)
12 cd00443 ADA_AMPD Adenosine/AMP 100.0 2.1E-49 4.6E-54 401.6 22.7 287 7-420 1-304 (305)
13 TIGR01431 adm_rel adenosine de 100.0 1.7E-44 3.7E-49 385.0 29.5 271 45-461 188-479 (479)
14 KOG1097|consensus 100.0 1.1E-44 2.4E-49 371.3 21.7 257 46-422 113-384 (399)
15 PRK09358 adenosine deaminase; 100.0 8E-39 1.7E-43 327.8 27.2 297 2-421 5-334 (340)
16 TIGR01430 aden_deam adenosine 100.0 2.8E-36 6E-41 307.1 24.7 250 46-420 64-323 (324)
17 cd01320 ADA Adenosine deaminas 100.0 8.3E-33 1.8E-37 281.1 27.9 291 6-420 1-324 (325)
18 TIGR01224 hutI imidazoloneprop 99.4 1.7E-11 3.8E-16 126.9 21.8 243 48-411 89-335 (377)
19 cd01296 Imidazolone-5PH Imidaz 99.3 1.1E-10 2.5E-15 120.4 21.0 242 48-411 86-331 (371)
20 PRK09230 cytosine deaminase; P 99.1 3.9E-09 8.5E-14 112.2 19.4 251 46-410 94-364 (426)
21 cd01292 metallo-dependent_hydr 99.1 5.7E-08 1.2E-12 93.2 23.0 236 46-404 27-273 (275)
22 cd01305 archeal_chlorohydrolas 98.8 3.1E-08 6.7E-13 98.1 12.3 122 192-400 127-256 (263)
23 PRK07213 chlorohydrolase; Prov 98.7 1.7E-07 3.6E-12 98.0 13.5 136 188-410 177-326 (375)
24 cd01298 ATZ_TRZ_like TRZ/ATZ f 98.6 9.7E-06 2.1E-10 84.3 22.3 137 188-410 192-352 (411)
25 PRK08393 N-ethylammeline chlor 98.6 9.3E-06 2E-10 86.2 22.2 137 188-410 187-347 (424)
26 PRK09356 imidazolonepropionase 98.5 1.9E-05 4.2E-10 82.8 22.7 140 187-411 219-361 (406)
27 cd01293 Bact_CD Bacterial cyto 98.5 1.6E-05 3.4E-10 82.2 20.7 251 46-409 88-357 (398)
28 PRK06886 hypothetical protein; 98.5 2.1E-05 4.6E-10 81.4 21.2 283 8-409 21-327 (329)
29 PRK14085 imidazolonepropionase 98.4 2.5E-05 5.4E-10 81.8 18.6 138 188-410 205-344 (382)
30 PRK06687 chlorohydrolase; Vali 98.3 0.00016 3.5E-09 76.5 22.6 89 288-411 258-355 (419)
31 TIGR02967 guan_deamin guanine 98.2 0.00043 9.2E-09 72.7 24.3 86 290-411 253-344 (401)
32 PRK09228 guanine deaminase; Pr 98.2 0.00066 1.4E-08 72.6 24.4 88 288-411 276-369 (433)
33 cd01303 GDEase Guanine deamina 97.9 0.0043 9.3E-08 66.2 23.9 88 288-411 273-372 (429)
34 PRK07203 putative chlorohydrol 97.8 0.0043 9.3E-08 66.3 22.3 79 291-408 270-356 (442)
35 cd01313 Met_dep_hydrolase_E Me 97.8 0.0058 1.3E-07 65.0 23.2 82 291-410 271-367 (418)
36 cd01299 Met_dep_hydrolase_A Me 97.8 0.00011 2.3E-09 75.1 9.7 155 187-411 157-315 (342)
37 cd01312 Met_dep_hydrolase_D Me 97.7 0.00057 1.2E-08 71.9 13.2 88 288-410 243-336 (381)
38 PRK08203 hydroxydechloroatrazi 97.6 0.0063 1.4E-07 65.1 20.7 88 288-410 276-371 (451)
39 PRK07583 cytosine deaminase-li 97.6 0.00084 1.8E-08 71.8 13.9 150 190-410 212-380 (438)
40 PRK08204 hypothetical protein; 97.6 0.0008 1.7E-08 71.7 13.5 88 288-411 256-363 (449)
41 PRK07572 cytosine deaminase; V 97.5 0.013 2.9E-07 62.3 21.7 98 289-410 256-360 (426)
42 PRK12393 amidohydrolase; Provi 97.5 0.00073 1.6E-08 72.7 11.8 89 287-410 279-375 (457)
43 TIGR02022 hutF formiminoglutam 97.5 0.024 5.2E-07 61.0 22.9 81 291-409 280-376 (455)
44 PRK09045 N-ethylammeline chlor 97.5 0.00097 2.1E-08 71.2 12.2 89 288-411 264-361 (443)
45 PRK06038 N-ethylammeline chlor 97.3 0.0026 5.6E-08 67.8 12.8 85 291-410 255-348 (430)
46 PRK15493 5-methylthioadenosine 97.2 0.0036 7.9E-08 66.9 13.0 84 292-410 263-355 (435)
47 PRK06151 N-ethylammeline chlor 97.2 0.048 1E-06 59.3 21.3 83 289-410 293-384 (488)
48 KOG1096|consensus 97.2 0.00014 2.9E-09 80.0 1.3 229 129-390 504-764 (768)
49 PRK06380 metal-dependent hydro 97.1 0.0026 5.6E-08 67.3 10.7 88 288-409 248-344 (418)
50 PRK08418 chlorohydrolase; Prov 97.1 0.0039 8.5E-08 66.2 12.0 85 289-409 268-358 (408)
51 PRK07228 N-ethylammeline chlor 97.1 0.0063 1.4E-07 64.9 12.7 86 291-411 264-358 (445)
52 PRK09229 N-formimino-L-glutama 97.0 0.0054 1.2E-07 65.9 12.1 81 291-409 280-376 (456)
53 TIGR03314 Se_ssnA putative sel 97.0 0.0038 8.2E-08 66.9 10.1 64 288-390 266-329 (441)
54 COG0402 SsnA Cytosine deaminas 96.7 0.094 2E-06 55.8 18.0 60 293-388 265-325 (421)
55 PRK05985 cytosine deaminase; P 96.2 0.38 8.1E-06 50.5 18.7 140 188-410 189-347 (391)
56 cd01300 YtcJ_like YtcJ_like me 96.0 0.041 9E-07 59.2 10.6 150 187-411 292-464 (479)
57 cd01309 Met_dep_hydrolase_C Me 96.0 0.041 8.9E-07 57.4 10.1 90 290-411 230-321 (359)
58 KOG3968|consensus 95.6 0.23 4.9E-06 52.9 13.7 80 293-411 289-379 (439)
59 COG1816 Add Adenosine deaminas 95.3 0.0026 5.6E-08 66.3 -1.8 146 7-163 2-157 (345)
60 COG1228 HutI Imidazolonepropio 94.5 0.34 7.5E-06 51.8 11.5 62 348-412 296-358 (406)
61 PRK06846 putative deaminase; V 91.6 1.6 3.6E-05 46.2 11.3 45 349-395 294-342 (410)
62 cd01306 PhnM PhnM is believed 88.7 6.1 0.00013 41.1 12.2 56 349-410 237-293 (325)
63 PF07969 Amidohydro_3: Amidohy 82.5 4.3 9.3E-05 42.2 7.7 146 192-411 227-389 (404)
64 PRK15446 phosphonate metabolis 78.8 27 0.00059 36.9 12.3 57 349-411 288-345 (383)
65 PF08187 Tetradecapep: Myoacti 69.4 1.6 3.4E-05 24.2 0.0 9 237-245 6-14 (14)
66 COG1574 Predicted metal-depend 62.1 59 0.0013 36.3 10.5 62 346-410 415-487 (535)
67 PRK12394 putative metallo-depe 58.1 1.6E+02 0.0035 30.8 12.6 58 352-410 260-321 (379)
68 PF13147 Amidohydro_4: Amidohy 55.5 26 0.00057 33.4 5.8 61 349-410 227-289 (304)
69 TIGR02318 phosphono_phnM phosp 54.6 1E+02 0.0022 32.5 10.4 57 349-410 283-340 (376)
70 TIGR00010 hydrolase, TatD fami 47.1 2.6E+02 0.0057 26.6 11.6 55 351-405 184-248 (252)
71 cd00530 PTE Phosphotriesterase 41.5 2.9E+02 0.0063 27.4 11.0 52 350-401 226-286 (293)
72 cd01310 TatD_DNAse TatD like p 40.3 3.3E+02 0.0072 25.9 11.9 55 351-405 184-248 (251)
73 cd00854 NagA N-acetylglucosami 30.6 1.9E+02 0.0041 30.3 7.9 157 209-411 182-345 (374)
74 cd01295 AdeC Adenine deaminase 28.9 6.5E+02 0.014 26.8 11.7 52 357-409 201-254 (422)
75 TIGR03643 conserved hypothetic 28.7 47 0.001 27.2 2.3 34 382-415 16-49 (72)
76 PF01979 Amidohydro_1: Amidohy 26.3 50 0.0011 32.8 2.6 97 288-411 217-316 (333)
77 KOG1321|consensus 24.9 1.4E+02 0.003 31.4 5.4 69 51-128 137-213 (395)
78 PRK13207 ureC urease subunit a 24.8 5.2E+02 0.011 29.2 10.3 59 353-412 348-421 (568)
79 PF10985 DUF2805: Protein of u 22.7 71 0.0015 26.3 2.3 35 382-416 15-49 (73)
80 PF05871 ESCRT-II: ESCRT-II co 22.5 1.6E+02 0.0035 27.0 4.9 45 54-100 64-115 (139)
81 COG1904 UxaC Glucuronate isome 22.3 54 0.0012 35.6 1.9 90 3-115 21-113 (463)
82 TIGR01975 isoAsp_dipep isoaspa 21.9 1.7E+02 0.0036 31.2 5.6 61 350-410 267-344 (389)
83 PRK10657 isoaspartyl dipeptida 21.6 1.9E+02 0.0042 30.0 6.0 62 349-410 265-343 (388)
84 PRK06361 hypothetical protein; 20.1 2.2E+02 0.0047 27.1 5.5 46 354-402 157-202 (212)
No 1
>KOG1096|consensus
Probab=100.00 E-value=1e-115 Score=924.32 Aligned_cols=386 Identities=64% Similarity=1.034 Sum_probs=379.3
Q ss_pred CCCccccccccCCccccchhhhcCCCCCCCCccccccccccCCHH-----HHHHHHHHHHHHHHHCCceEEEEEEeccCC
Q psy8141 6 SLPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKTIS-----DLSNQKSEVAADLEESKYQNAELRLSIYGK 80 (480)
Q Consensus 6 ~lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t~~-----~la~l~~~vi~~l~~~~v~y~Elr~s~~~~ 80 (480)
+|..++|++|+++.|||+||+| +.+|||.|.++||++| |+||| |||+|+++|+.+++++|||++|+|+++||+
T Consensus 374 Dlsvd~ldvha~~~tfHrfdkf-n~Kynp~g~s~LR~iF-LktDNyI~GeYlAei~Kev~~dleeSKYQ~ae~rlsiygr 451 (768)
T KOG1096|consen 374 DLSVDTLDVHADRNTFHRFDKF-NAKYNPVGESRLREIF-LKTDNYINGEYLAEILKEVLSDLEESKYQLAEPRLSIYGR 451 (768)
T ss_pred ccchhHHHhhhchhhhhccchh-hhhcCCccHHHHHHHH-HhhccccchhhHHHHHHHHHhhHHHhhhhhcceeEEEeee
Confidence 7889999999999999999999 9999999999999999 99998 999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEee
Q psy8141 81 SEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDS 160 (480)
Q Consensus 81 ~~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl 160 (480)
+.+||++||.|+..++++|.|+||+|||||.|+++++.++|.|||+||+|||.|||+||.+|++||+|+.|+++|+|||+
T Consensus 452 s~~EW~klA~W~v~~~v~S~NvRWlIQipRiydvy~~~g~v~nFqe~L~nIF~PLFeat~~p~~hp~Lh~FL~~V~gfDs 531 (768)
T KOG1096|consen 452 SRDEWDKLASWLVDNKVFSPNVRWLIQIPRLYDVYRKKGIVKNFQEMLDNIFLPLFEATKDPSSHPELHVFLQQVSGFDS 531 (768)
T ss_pred CHHHHHHHHHHHHHccccCCCeeEEEecchHhHHHHhcCchhhHHHHHHHHhhhhhhcccCCCcchHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHhhcccc
Q psy8141 161 VDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMMAEN 240 (480)
Q Consensus 161 ~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~l~a~R 240 (480)
++||++++|+.|+...|.|++|+.++|||++||+||+||||++||.+|+++|+|||+||+||||+|+.+|+++|||.|+.
T Consensus 532 VdDesk~~~~~Ft~~sp~P~~Wt~~~NPpysyYlYY~YaNl~~LN~lR~~rg~nTf~LRphCgeag~~~hLvsafLla~g 611 (768)
T KOG1096|consen 532 VDDESKYEWKNFTRKSPKPKEWTAEDNPPYSYYLYYMYANLAKLNHLRRARGQNTFTLRPHCGEAGDIEHLVSAFLLAHG 611 (768)
T ss_pred ccccccccccccccCCCCchhccccCCCchhhhHHHHHHHHHHHHHHHHHcCCceEEecCCCCCcCCHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCc
Q psy8141 241 ISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPL 320 (480)
Q Consensus 241 IgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~ 320 (480)
|+||+. +.+.|.||||||+.||||+|+|+||+++++
T Consensus 612 Ishg~L-------------------------------------lrk~PvLQYLyYL~QIpIamSPLSnnslfl------- 647 (768)
T KOG1096|consen 612 ISHGIL-------------------------------------LRKVPVLQYLYYLAQIPIAMSPLSNNSLFL------- 647 (768)
T ss_pred ccchhh-------------------------------------hccchHHHHHHHHHhcchhhcccccccccc-------
Confidence 999998 778999999999999999999999999876
Q ss_pred hHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHH
Q psy8141 321 PEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA 400 (480)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLa 400 (480)
+|.+|||++||++|++|||||||||+||+|+|||+|||++|||+|+|+.+||||||
T Consensus 648 ------------------------~Y~kNPf~~~f~~GL~VSLSTddpLqf~yTkEPLiEEYSIAAqiykLss~DmCELa 703 (768)
T KOG1096|consen 648 ------------------------SYHKNPFPEYFKRGLNVSLSTDDPLQFHYTKEPLIEEYSIAAQVYKLSSCDMCELA 703 (768)
T ss_pred ------------------------ccccCchHHHHHhhceeeeccCCchhhhcccchHHHHHHHHHHHHhcccccHHHHH
Confidence 49999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChHHHHHHhcccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHh
Q psy8141 401 RNSVLMSGFPHGMKQYWLGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFRVFK 461 (480)
Q Consensus 401 rNSv~~S~~~~~~K~~wlg~~~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~~~~~~ 461 (480)
||||.+|||+++.|.+|||..|.++|..|||+.|||||+||++||.+||.+||.+|.+.+.
T Consensus 704 RNSVlqSGfs~~~K~hWlG~~y~k~g~~gndi~rtNVP~IR~~yR~eTL~~El~li~~~~~ 764 (768)
T KOG1096|consen 704 RNSVLQSGFSHQLKSHWLGVNYKKEGPEGNDIRRTNVPDIRVAYRYETLCQELNLIFDHVN 764 (768)
T ss_pred hhhhhhhcchHHhhhhhccCchhhcCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999998775
No 2
>PLN03055 AMP deaminase; Provisional
Probab=100.00 E-value=5.2e-107 Score=870.41 Aligned_cols=386 Identities=58% Similarity=0.962 Sum_probs=375.8
Q ss_pred CCCccccccccCCccccchhhhcCCCCCCCCccccccccccCCHH-----HHHHHHHHHHHHHHHCCceEEEEEEeccCC
Q psy8141 6 SLPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKTIS-----DLSNQKSEVAADLEESKYQNAELRLSIYGK 80 (480)
Q Consensus 6 ~lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t~~-----~la~l~~~vi~~l~~~~v~y~Elr~s~~~~ 80 (480)
+|.++.|++|++++||++||+| +.+|||.|.++||++| |+|+| |||+|+|+|+++++++|||++|+|+++||+
T Consensus 205 dLtVd~Ldvha~~~~fhrfD~f-n~kynp~g~s~Lr~iF-LktdN~i~G~YlAel~k~v~~~le~skyQ~~E~rlsiYG~ 282 (602)
T PLN03055 205 DLNVDLLDVHADKNTFHRFDKF-NLKYNPCGQSRLREIF-LKQDNLIQGRFLAELTKEVFSDLEASKYQMAEYRISIYGR 282 (602)
T ss_pred cCcccccCccCCCCcccccccc-cccCCccchHHHHHHH-cCcCCCcchhhHHHHHHHHHHHHHhccceeEEEEEEEeCC
Confidence 6899999999999999999999 9999999999999999 99998 999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEee
Q psy8141 81 SEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDS 160 (480)
Q Consensus 81 ~~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl 160 (480)
+.+||+++|+|+.++++++.++||+||+||.|+++++.+.++|||++|+|||.|||+||++|++||+|+.|+++|+|||+
T Consensus 283 ~~~EW~kLA~W~~~~~l~s~n~rW~IqiPRly~~~~~~g~v~~Fqd~L~NIF~PLFeatl~P~~hp~L~~fL~~v~gfD~ 362 (602)
T PLN03055 283 KQSEWDQLASWIVNNRLYSENVVWLIQLPRLYNVYKEMGIVQSFQQILDNIFKPLFEVTVDPSSHPQLHVFLKMVVGFDM 362 (602)
T ss_pred CHHHHHHHHHHHHHcCcCCCCceEEEecCcchhhhhcCCCcCCHHHHHHHHHHHHHHHHcCcccCHHHHHHHHhcCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHhhcccc
Q psy8141 161 VDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMMAEN 240 (480)
Q Consensus 161 ~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~l~a~R 240 (480)
|+||++.+.+ +++..++|++|++++|||++||+||+||||++||+||+++|+|||.||+||||+|+++++++|+|+|+|
T Consensus 363 VddEs~~e~~-~~~~~~~P~~W~~~~NPpy~Yy~YY~yaNl~~LN~lR~~rglnT~~~rpHAGEag~~~~v~~alL~a~R 441 (602)
T PLN03055 363 VDDESKPERR-PTKHMQTPEQWDIPFNPAYSYWAYYVYANLYTLNKLRESKGLNTIKFRPHAGEAGDIDHLAAAFLLAHN 441 (602)
T ss_pred ecCCCccccc-cccCCCChhhCcCCCCCCcchhHHHHHHHHHHHHHHHHHcCCCCCCccccCCCCCCHHHHHHHhhCCce
Confidence 9999998755 577889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCc
Q psy8141 241 ISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPL 320 (480)
Q Consensus 241 IgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~ 320 (480)
||||++ +.++|.|+|+++++||||+|||+||+.+
T Consensus 442 IgHGi~-------------------------------------l~~dP~L~yl~~~~qI~LevCPlSN~~l--------- 475 (602)
T PLN03055 442 IAHGNN-------------------------------------LRKSPGLQYLYYLAQIGLAMSPLSNNSL--------- 475 (602)
T ss_pred ecCccc-------------------------------------cCCCHHHHHHHHHcCCeEEEccCcchhh---------
Confidence 999999 7899999999999999999999999964
Q ss_pred hHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHH
Q psy8141 321 PEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA 400 (480)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLa 400 (480)
+.+|.+|||++|+++|++||||||||++||+|++||+|||++|++.|+|+.+||||||
T Consensus 476 ----------------------~~~y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa~~~~LS~~DL~eLa 533 (602)
T PLN03055 476 ----------------------FLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAAQVWKLSSCDLCEIA 533 (602)
T ss_pred ----------------------ccchhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHHHHhCCCHHHHHHHH
Confidence 3469999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChHHHHHHhcccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhc
Q psy8141 401 RNSVLMSGFPHGMKQYWLGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFRVFKG 462 (480)
Q Consensus 401 rNSv~~S~~~~~~K~~wlg~~~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~~~~~~~ 462 (480)
||||.+||+++++|++|+|..|.++|++|||++|||||+||++||.+||.+||++|++.+.+
T Consensus 534 rNSV~~Sf~~~~~K~~~lg~~y~~~~~~gnd~~~tnVp~iR~~fR~etl~~E~~~l~~~~~~ 595 (602)
T PLN03055 534 RNSVLQSGFPHASKKHWVGDNYWLRGPAGNDIHKTNVPHMRVEFRHEVWKEELQYVFLGVAK 595 (602)
T ss_pred HHHHHHhcCCHHHHHHHhccchhhcCCCCCCcccccChHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999987764
No 3
>PLN02768 AMP deaminase
Probab=100.00 E-value=3.2e-106 Score=876.22 Aligned_cols=387 Identities=54% Similarity=0.920 Sum_probs=375.5
Q ss_pred cCCCccccccccCCccccchhhhcCCCCCCCCccccccccccCCHH-----HHHHHHHHHHHHHHHCCceEEEEEEeccC
Q psy8141 5 ASLPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKTIS-----DLSNQKSEVAADLEESKYQNAELRLSIYG 79 (480)
Q Consensus 5 ~~lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t~~-----~la~l~~~vi~~l~~~~v~y~Elr~s~~~ 79 (480)
.+|.++.|++|++++||++||+| |.+|+|+|.++||++| |+|+| |||+|+|+|+++++++|||++|+|+++||
T Consensus 437 ydLsVD~Ldvha~~~tfhRfDkF-n~kynP~G~s~LReiF-LktDN~i~GrYfAELiK~V~~dlE~sKyQ~aE~RlsIYG 514 (835)
T PLN02768 437 YDLNVDLLDVHADKSTFHRFDKF-NLKYNPCGQSRLREIF-LKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYG 514 (835)
T ss_pred cCCcccccccCCCcccccccccc-ccccCccchHHHHHHH-cCcCCCCChhhHHHHHHHHHHHHHhccceeeEEEEEecC
Confidence 37899999999999999999999 9999999999999999 99998 99999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEe
Q psy8141 80 KSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFD 159 (480)
Q Consensus 80 ~~~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfD 159 (480)
++.+||+++|+|+.++++++.++||+|||||.|+++++.+.+++||++|+|||.|||+||++|++||+|+.||++|+|||
T Consensus 515 r~~~EW~kLA~W~v~~~l~S~nvRWlIQIPRlY~i~k~~g~v~nFqd~L~NIF~PLFeATl~P~~hp~L~~FL~~V~GFD 594 (835)
T PLN02768 515 RKQSEWDQLASWIVNNELYSENVVWLIQLPRLYNVYKEMGIVTSFQNILDNIFIPLFEVTVDPDSHPQLHVFLKQVVGLD 594 (835)
T ss_pred CCHHHHHHHHHHHHHcCCCCCCceEEEEcccchhhhhcCCccCCHHHHHHHHHHHHHHHhcCCccCHHHHHHHHhcCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHhhccc
Q psy8141 160 SVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMMAE 239 (480)
Q Consensus 160 l~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~l~a~ 239 (480)
+|+||++.+.+ ++...|+|.+|++++|||++||+||+||||++||+||+++|+|||.||+||||+++++++++|||+|+
T Consensus 595 sVdDESk~e~~-~~~~~p~P~~W~~~~NPPyaYYlYYmyANi~~LN~lR~~rGlNTf~fRPHAGEag~~e~I~~AlL~Ad 673 (835)
T PLN02768 595 LVDDESKPERR-PTKHMPTPAQWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIKFRPHSGEAGDIDHLAATFLTCH 673 (835)
T ss_pred eecCCCccccc-cCcCCCChhhCcCCCCCChhhhHHHHHHHHHHHHHHHHHCCCCccccccccCCCCCHHHHHHHHhcCC
Confidence 99999998765 46788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCC
Q psy8141 240 NISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNP 319 (480)
Q Consensus 240 RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~ 319 (480)
|||||++ +.++|.|+|++|++||||+|||+||+.+
T Consensus 674 RIgHGv~-------------------------------------l~kdP~LqyL~~l~qIgLevCPlSN~~l-------- 708 (835)
T PLN02768 674 NIAHGIN-------------------------------------LRKSPVLQYLYYLAQIGLAMSPLSNNSL-------- 708 (835)
T ss_pred ccCCccc-------------------------------------cCcCHHHHHHHHHcCCeEEECCCcchhh--------
Confidence 9999999 7889999999999999999999999964
Q ss_pred chHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH
Q psy8141 320 LPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL 399 (480)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL 399 (480)
+.+|.+|||++|+++|++||||||||++||+|+|||+|||++|++.|+|+.+|||||
T Consensus 709 -----------------------~~~y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak~~~LS~~DL~EL 765 (835)
T PLN02768 709 -----------------------FLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSSCDLCEI 765 (835)
T ss_pred -----------------------hcchhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHHHhCcCHHHHHHH
Confidence 346999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHhcccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhc
Q psy8141 400 ARNSVLMSGFPHGMKQYWLGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFRVFKG 462 (480)
Q Consensus 400 arNSv~~S~~~~~~K~~wlg~~~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~~~~~~~ 462 (480)
|||||.+||+++++|++|+|..|.++|++|||++|||||+||++||.|||.+|+++||.-.++
T Consensus 766 arNSV~aSff~~~~K~~wLg~~y~~~g~~gNd~~ktnVp~iRl~fR~etL~~El~~l~~~~~~ 828 (835)
T PLN02768 766 ARNSVYQSGFSHALKSHWIGKEYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAK 828 (835)
T ss_pred HHHHHHHhcCCHHHHHHHHhccccccCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999986654
No 4
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=100.00 E-value=2e-106 Score=856.50 Aligned_cols=377 Identities=65% Similarity=1.087 Sum_probs=368.5
Q ss_pred CCCccccccccCCccccchhhhcCCCCCCCCccccccccccCCHH-----HHHHHHHHHHHHHHHCCceEEEEEEeccCC
Q psy8141 6 SLPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKTIS-----DLSNQKSEVAADLEESKYQNAELRLSIYGK 80 (480)
Q Consensus 6 ~lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t~~-----~la~l~~~vi~~l~~~~v~y~Elr~s~~~~ 80 (480)
+|+++.|++|+++++|++||+| +.+|+|.|.++||++| |+|+| |||+++|+|+++++++|||++|+|+++||+
T Consensus 115 ~ltvd~L~~~a~~~~~~rfd~f-n~kynp~g~~~Lr~iF-Lktdn~~~G~y~Ael~k~v~~~le~~kyq~~E~rlsiyG~ 192 (496)
T cd01319 115 DLSVDTLDVHADRNTFHRFDKF-NLKYNPIGESRLREIF-LKTDNYINGRYLAEITKEVFSDLEESKYQHAEYRLSIYGR 192 (496)
T ss_pred hCchhhcCcCCCCCcccccccc-ccccCccchHHHHHHH-hccCCCcchHhHHHHHHHHHHHHHhccceeEEEEEEEeCC
Confidence 7899999999999999999999 9999999999999999 99998 999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEee
Q psy8141 81 SEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDS 160 (480)
Q Consensus 81 ~~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl 160 (480)
+++||+++|+|+.++++++.++||+|||||.|+++++.+.+++||++|+|||.|||+||++|++||+|+.|+++|+|||+
T Consensus 193 ~~~Ew~~lA~W~~~~~l~s~n~rW~iqipR~y~~~~~~g~~~~Fq~~L~nIF~PLfeat~~P~~~p~l~~fL~~v~gfd~ 272 (496)
T cd01319 193 SKDEWDKLASWVVDNDLFSPNVRWLIQIPRLYDVYKKSGIVNSFQEMLENIFEPLFEATKDPSSHPELHVFLQQVIGFDS 272 (496)
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEecchhHHHHhhcCCcCCHHHHHHHHHHHHHHHhcCcccCHHHHHHHHhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHhhcccc
Q psy8141 161 VDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMMAEN 240 (480)
Q Consensus 161 ~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~l~a~R 240 (480)
|+||++ .++.|+...|+|.+|++++|||++||+||+||||++||++|+++|+|||.||+||||+++++++++|+|+|+|
T Consensus 273 VddEs~-~~~~~~~~~p~P~~w~~~~nPpy~Yy~YY~yaNi~~LN~~R~~rglntf~~r~HaGE~g~~~~l~~alL~adR 351 (496)
T cd01319 273 VDDESK-SERRFTRKFPKPEEWTSEENPPYSYYLYYMYANITTLNSFRKARGFNTFVLRPHCGEAGDIDHLASAFLLAHG 351 (496)
T ss_pred EcCCCc-cccCCCcCCCChhcCCCCCCCCceeeHHHHHHHHHHHHHHHHHcCCCCcceeeecCCCCChHHHHHHhhcCcc
Confidence 999999 6788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCc
Q psy8141 241 ISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPL 320 (480)
Q Consensus 241 IgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~ 320 (480)
||||++ +.++|.|+|+++++||||||||+||+.+.
T Consensus 352 IGHGv~-------------------------------------l~~dp~L~~l~~~~qI~levCPlSN~~l~-------- 386 (496)
T cd01319 352 ISHGIN-------------------------------------LRKVPVLQYLYYLTQIGIAMSPLSNNSLF-------- 386 (496)
T ss_pred cccccc-------------------------------------cCCCHHHHHHHHHcCCeEEEecCccHhhh--------
Confidence 999999 77899999999999999999999999752
Q ss_pred hHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHH
Q psy8141 321 PEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA 400 (480)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLa 400 (480)
.+|.+|||+.|+++|++||||||||++||+|++||++||++|++.|+|+.+|||+||
T Consensus 387 -----------------------~~~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~~~~~Ls~~Dl~eLa 443 (496)
T cd01319 387 -----------------------LSYEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSTCDMCELA 443 (496)
T ss_pred -----------------------cCcccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 359999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChHHHHHHhcccccccCCCCCcccccCCcchHHHHHHHHHHHHH
Q psy8141 401 RNSVLMSGFPHGMKQYWLGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEEL 453 (480)
Q Consensus 401 rNSv~~S~~~~~~K~~wlg~~~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~ 453 (480)
+|||.+||+++++|++|+|..|.++|++|||++|||||++|++||.|||.+|+
T Consensus 444 rNSV~~Sf~~~~~K~~~l~~~~~~~~~~gnd~~~t~Vp~~R~~fR~etl~~E~ 496 (496)
T cd01319 444 RNSVLQSGFEHSIKRHWLGPNYLKRGVAGNDIRRTNVPQIRMAYRYETLCEEL 496 (496)
T ss_pred HHHHHHhCCCHHHHHHHHHHHhhhcCCCCCCcccccCcHHHHHHHHHHHhhhC
Confidence 99999999999999999999999999999999999999999999999999994
No 5
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=100.00 E-value=4.7e-106 Score=865.43 Aligned_cols=382 Identities=63% Similarity=1.049 Sum_probs=373.4
Q ss_pred cCCCccccccccCCccccchhhhcCCCCCCCCccccccccccCCHH-----HHHHHHHHHHHHHHHCCceEEEEEEeccC
Q psy8141 5 ASLPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKTIS-----DLSNQKSEVAADLEESKYQNAELRLSIYG 79 (480)
Q Consensus 5 ~~lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t~~-----~la~l~~~vi~~l~~~~v~y~Elr~s~~~ 79 (480)
.+|++++|++|+++++|++||+| +.+|||.|+++||++| |+|+| |||+++|+|+++++++|||++|+|+++||
T Consensus 225 ~dltvd~Ldv~a~~~~fhrfd~f-n~kynp~G~s~Lr~iF-LktdN~i~G~YfAelik~v~~~le~skyQ~~E~rlsiyG 302 (611)
T TIGR01429 225 YDLSVDTLDVHADRNTFHRFDKF-NLKYNPVGESRLREIF-LKTDNYIGGKYFAELVKEVFTDLEDSKYQYAEPRLSIYG 302 (611)
T ss_pred hhCcHhhhCCcCCCCcccccccc-ccccCccchHHHHHHH-hccCCCcchhhHHHHHHHHHHHHHhcCceeEEEEEEEeC
Confidence 47899999999999999999999 9999999999999999 99998 99999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEe
Q psy8141 80 KSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFD 159 (480)
Q Consensus 80 ~~~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfD 159 (480)
++.+||+++|+|+.++++++.++||+||+||.|+++++.+.++|||++|+|||.|||+||++|++||+|+.|+++|+|||
T Consensus 303 ~~~~EW~kLA~W~~~~~l~s~n~rW~IqiPRly~v~k~~g~v~~Fq~~L~NIF~PLFeat~~P~~~p~L~~fL~~v~GfD 382 (611)
T TIGR01429 303 RSPKEWDSLARWIIDHDVFSPNVRWLIQVPRLYDVYRSKKLVPNFGDMLENVFLPLFEVTKDPSSHPELHLFLQQVTGFD 382 (611)
T ss_pred CCHHHHHHHHHHHHHcCCCCCCccEEEEcchhHHHHhcCCCcCCHHHHHHHHHHHHHHHhcCCccCHHHHHHHHhccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHhhccc
Q psy8141 160 SVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMMAE 239 (480)
Q Consensus 160 l~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~l~a~ 239 (480)
+|+||++.+++.|+...++|++|++++|||++||+||+||||++||++|+++|+++|.||+||||+++++++++|+|+|+
T Consensus 383 ~VddEs~~e~~~f~~~~~~P~~w~~~~NPpy~Yy~YY~yaNl~~LN~~R~~rGLnt~~LrpHaGEag~~e~l~~A~L~ad 462 (611)
T TIGR01429 383 SVDDESKHEDHMFSRKFPSPDEWTSEQNPPYSYYLYYMYANIMVLNNFRRERGLNTFLLRPHCGEAGSVDHLVSAFLTSH 462 (611)
T ss_pred EEcCCcccccccccCCCCCcccccCCCCCCceeeHHHHHHHHHHHHHHHHHcCCCccceeecCCCCCCHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCC
Q psy8141 240 NISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNP 319 (480)
Q Consensus 240 RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~ 319 (480)
|||||++ +.++|.|+|+++++||||+|||+||+.+
T Consensus 463 RIgHGi~-------------------------------------l~~dp~L~yl~~~~qI~LevCPtSN~~l-------- 497 (611)
T TIGR01429 463 GINHGIL-------------------------------------LRKVPVLQYLYYLTQIPIAMSPLSNNSL-------- 497 (611)
T ss_pred cccccee-------------------------------------cCCCHHHHHHHHHcCCeEEEcCCcchhh--------
Confidence 9999999 7889999999999999999999999954
Q ss_pred chHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH
Q psy8141 320 LPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL 399 (480)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL 399 (480)
+.+|.+|||++|+++|++||||||||++||+|++||+|||++|++.|+|+.+|||+|
T Consensus 498 -----------------------~~~y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa~~~~Ls~~Dl~eL 554 (611)
T TIGR01429 498 -----------------------FLEYSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAAQVWKLSTCDMCEL 554 (611)
T ss_pred -----------------------ccChhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHHHHhCCCHHHHHHH
Confidence 346999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHhcccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHH
Q psy8141 400 ARNSVLMSGFPHGMKQYWLGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNI 456 (480)
Q Consensus 400 arNSv~~S~~~~~~K~~wlg~~~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~ 456 (480)
|||||.+||+++++|++|+|..|.++|++|||++|||||+||++||.|||.+||++|
T Consensus 555 arNSV~~S~~~~~~K~~~lg~~~~~~g~~gnd~~ktnVp~iR~~fR~etl~~E~~~~ 611 (611)
T TIGR01429 555 ARNSVLQSGFEHQVKQHWLGPNYYKEGPEGNDIRRTNVPDIRVAFRYETLCNELSLL 611 (611)
T ss_pred HHHHHHHhCCCHHHHHHHhcCcchhcCCcCCCccccCChHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999874
No 6
>PTZ00310 AMP deaminase; Provisional
Probab=100.00 E-value=1.2e-102 Score=885.14 Aligned_cols=386 Identities=45% Similarity=0.773 Sum_probs=372.4
Q ss_pred CCccccccccCCccccchhhhcCCCCCCCCccccccccccCCHH-----HHHHHHHHHHHHHHHCCceEEEEEEeccCCC
Q psy8141 7 LPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKTIS-----DLSNQKSEVAADLEESKYQNAELRLSIYGKS 81 (480)
Q Consensus 7 lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t~~-----~la~l~~~vi~~l~~~~v~y~Elr~s~~~~~ 81 (480)
|+++.|+||+|+++|++||+| |.+|||+|.++||++| |+||| |||+|+|+|++++++++||++|+|+++||++
T Consensus 901 lsvd~L~v~ad~~~f~rfD~f-n~kynP~g~s~LreiF-LktDN~i~G~YfAel~K~v~~~le~skyq~aE~RlSIYG~~ 978 (1453)
T PTZ00310 901 LTVDQLNVQADHTLFERFDNF-NSKYNPMENPDLRSLL-LKTDNFMKGRYFAELIKDVFEQYSRDRFTYAENRLSIYGIN 978 (1453)
T ss_pred cchhhhccccCcchhhhhhcc-cccCCCcccHHHHHHH-ccCCCCcccHhHHHHHHHHHHHHHhccceeeeeeEeeeCCC
Confidence 889999999999999999999 9999999999999999 99998 9999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEeec
Q psy8141 82 EDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSV 161 (480)
Q Consensus 82 ~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~ 161 (480)
.+||+++|+|+.+++++|.++||+|||||.|+++++.+.+++||++|+|||.|||+||++|++||+|+.||++|+|||+|
T Consensus 979 ~~EW~kLA~W~~~~~l~S~nvrW~IQiPRlY~~~k~~g~v~~F~~~L~nIF~PLFeat~~P~~hp~L~~FL~~v~gfDsV 1058 (1453)
T PTZ00310 979 VKEWDDLAHWFDTHGMASKHNKWMIQVPRVYKVFRAQNVIGSFGQYLDNIFQPLWEASLHPSKHPKFHYFLNHVSGFDSV 1058 (1453)
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEecchhhHHHHhcCCcCCHHHHHHHHHHHhHhhhcCcccChHHHHHHHHhCcceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHhhccccc
Q psy8141 162 DDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMMAENI 241 (480)
Q Consensus 162 gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~l~a~RI 241 (480)
+||++.+.+ |.. ++|.+|++.+|||++||+||+||||++||.+|+++|+|||.||+||||+|+++|+++|+|+|+||
T Consensus 1059 ddEsk~e~~-~~~--~~P~~W~~~~NPpy~Yy~YY~yaNi~~LN~~R~~rglnTf~~rpHAGEag~~~hI~~AlL~a~RI 1135 (1453)
T PTZ00310 1059 DNEATIDLP-FTD--VSPWAWTSVENPPYNYYLYYLYANIRTLNEFRASRGFSTFALRPHCGESGSMDHLYGAFLCANSI 1135 (1453)
T ss_pred cCCcccccc-cCC--CChhhccCCCCCchhHhHHHHHHHHHHHHHHHHHCCCCCcCccccCCCCCCHHHHHHHHhCCccc
Confidence 999997654 433 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCch
Q psy8141 242 SHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLP 321 (480)
Q Consensus 242 gHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~ 321 (480)
|||++ +.++|.|+|++|++||||+|||+||+.+
T Consensus 1136 gHGi~-------------------------------------l~~dp~L~yl~~l~qI~LevCPlSN~~l---------- 1168 (1453)
T PTZ00310 1136 CHGIN-------------------------------------LRNDPPMQYLYYLAQIGLHVSPLSNNAL---------- 1168 (1453)
T ss_pred cchhh-------------------------------------hCcCHHHHHHHHHcCCeEEECCCchHhh----------
Confidence 99999 7889999999999999999999999864
Q ss_pred HHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHH
Q psy8141 322 EYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELAR 401 (480)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLar 401 (480)
+.+|.+|||++|+++|++||||||||++||+|+|||+|||++|++.|+|+.+|||+|||
T Consensus 1169 ---------------------~~sy~~hP~~~f~~~Gl~VSLnTDDPl~f~tT~EpL~eEYsiaa~~~~LS~~Dl~elar 1227 (1453)
T PTZ00310 1169 ---------------------FLAFLENPFPVFFHRGLNVSLSTDDPLMFHQTQEPLIEEYSIAARVWGLSLNDLCEIAR 1227 (1453)
T ss_pred ---------------------hhchhhCcHHHHHHCCCEEEECCCCccccCCCcccHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 34699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCChHHHHHHhcccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhcccc
Q psy8141 402 NSVLMSGFPHGMKQYWLGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFRVFKGNVD 465 (480)
Q Consensus 402 NSv~~S~~~~~~K~~wlg~~~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~~~~~~~~~~ 465 (480)
|||.+|||+.+.|++|+|..|...|..|||+.|||||+||++||.|||.+||++|.+..-..+.
T Consensus 1228 NSV~~SGf~~~~K~~wlG~~~~~~~~~gnd~~ktnVp~iR~~yR~etl~~E~~~~~~~~~~~~~ 1291 (1453)
T PTZ00310 1228 NSVLQSGFDAAFKRNAIGDRWYLSSSLGNDSLRTHLSDIRVAFRFETYHTELNFLELCSGRPIP 1291 (1453)
T ss_pred HHHHHcCCCHHHHHHhhcchhhcCCCCCCcccccCCcHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 9999999999999999999999999999999999999999999999999999999987655443
No 7
>PTZ00310 AMP deaminase; Provisional
Probab=100.00 E-value=6.3e-94 Score=814.04 Aligned_cols=387 Identities=31% Similarity=0.483 Sum_probs=364.3
Q ss_pred ccCCCcccccccc--CCccccchhhhcCCCCCCCCc--cccccccccCCHH-HHHHHHHHHHHHHHHCCce--EEEEEEe
Q psy8141 4 VASLPHSTKIVHE--DKKTIADTDKHFKPSDNDSST--DQVAPLWQYKTIS-DLSNQKSEVAADLEESKYQ--NAELRLS 76 (480)
Q Consensus 4 ~~~lp~~~l~~h~--~~~~~~~~~~f~~~~~~~~~~--~~l~~~f~l~t~~-~la~l~~~vi~~l~~~~v~--y~Elr~s 76 (480)
..+|+++.|.+|+ |++||++||+| |.+ ||.|+ ++||++| |+|++ |+++++++++++++++||| .+|+|++
T Consensus 261 ~~dLTVd~Ldvha~~drntfhrFDkF-n~K-NP~G~~~s~LReiF-LkT~G~y~a~liK~vi~~lE~sKyQ~q~~E~rlS 337 (1453)
T PTZ00310 261 PRELTVEGLGWQPTKYRNKYGQYDLF-DAK-NPMGALGAELRQSF-LSLHGNLCGKLLRRELERREYQKQQPQATEYSLP 337 (1453)
T ss_pred ccccchhhcCCccccccccccccccc-ccc-CCCccchhHHHHHH-HhcCcHHHHHHHHHHHHHHHhccccceeeEEEEE
Confidence 3579999999999 78899999999 999 99998 8999999 99987 8999999999999999997 5999999
Q ss_pred ccCCChhhHHHHHHHHHHccccc-ceeeeecccccccChh---hhHHHHhhHHHHHHHHhhhhHhhhcCCCC--Chhhhc
Q psy8141 77 IYGKSEDEWDKLATWAIESNVYS-NNIRWLIQIPRLYDIF---KSNKLINNFQEILQNIFKPLFEVTNDSSS--HPHLHK 150 (480)
Q Consensus 77 ~~~~~~~e~~~la~w~~~~~~~~-~~irwiv~i~R~~~~~---~~~~~v~~f~~~L~~if~pL~~a~~~p~~--~~~l~~ 150 (480)
+||++.+||+++|+|+.++++.+ .++||+||| .|... ...+.++|||++|+|||.|||+||++|++ ||+|+.
T Consensus 338 IYGr~~~EW~kLA~Wvv~~~l~s~~nvRWlIQI--vyk~~~~~~~~~~v~nFqd~LdNIF~PLFeaTl~P~~~~~p~L~~ 415 (1453)
T PTZ00310 338 LYGHHPEELTDLAEWVRRQGFGPFSRNRWILAI--SFKELGPFQVPSSCTTVQDQLDNIFLPLFKATLCPSDPQWSDVAW 415 (1453)
T ss_pred EeCCChhHHHHHHHHHHHCCCCccCCceEEEEE--EEeccccccccccccCHHHHHHHHHHHHHHHhcCcCcCCCHHHHH
Confidence 99999999999999999999986 699999999 34332 22457999999999999999999999996 799999
Q ss_pred ccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhh
Q psy8141 151 FLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQH 230 (480)
Q Consensus 151 fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~ 230 (480)
||++|+|||++++|+.. ++.|+...++|++|++++|||++||+||+||||++||+||+++|+|||.||+||||+|+++|
T Consensus 416 FLq~V~GfDvvdde~~~-~~~f~~~~p~P~~w~~~~NPPyaYY~YYmyANl~~LN~lR~~RGlNTf~LRPhcgeag~~dh 494 (1453)
T PTZ00310 416 LLCQVGGLQILTHAVVR-SEDFDETAPDPDQVPYTAKCSDLYYFYYVYANLAVLNSLRKRKGLNTLQLRPSGEKAPAYDQ 494 (1453)
T ss_pred HHHhcCceeecCCCccc-ccccCCCCCCcccccCCCCCChhhhHHHHHHHHHHHHHHHHhCCCCeEEecCCCCCCCCHHH
Confidence 99999999987777654 77889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchh
Q psy8141 231 LVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNS 310 (480)
Q Consensus 231 l~~a~l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~ 310 (480)
++.+||.|+||+||++ +.++|.|+|++|++||||+|||+||+.
T Consensus 495 Lv~~fLladRI~HGi~-------------------------------------l~d~p~LqyL~~e~qI~LeVCPlSN~~ 537 (1453)
T PTZ00310 495 LISSYLLGDVITRATS-------------------------------------IADYPVLQYLCGLHRVGLTVSPLRDHA 537 (1453)
T ss_pred HHHHHHhhccccchhc-------------------------------------cCchHHHHHHHHHcCCeEEECCCcccc
Confidence 9999999999999999 788999999999999999999999999
Q ss_pred hccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcC
Q psy8141 311 LFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK 390 (480)
Q Consensus 311 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~ 390 (480)
++. .+|.+|||++|+++|++||||||||++||+|+|||+|||++|++.|+
T Consensus 538 l~v------------------------------~sy~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaaq~~g 587 (1453)
T PTZ00310 538 LSI------------------------------TAYFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAMKLFS 587 (1453)
T ss_pred cCC------------------------------CchhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHHHHhC
Confidence 853 46999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCChHHHHHHhcccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhccc
Q psy8141 391 LSSCDMCELARNSVLMSGFPHGMKQYWLGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFRVFKGNV 464 (480)
Q Consensus 391 Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~~~~~~~~~ 464 (480)
|+.+|+|+||||||.+||+++++|++|++..|. +|++|||++|||||+||++||+|||.+||++|++....+.
T Consensus 588 LS~~DL~eLarNSV~aSf~~~e~K~~lLg~l~~-~g~~gNd~~ktnVp~iR~~fR~etL~~El~ll~~~~~~~~ 660 (1453)
T PTZ00310 588 LSPLDTTELARNSVLNSSFPPEVKQQWLGERFQ-LGVEGNDFERSGVTNYRLAFREEAWALEEALLNDLLLNVP 660 (1453)
T ss_pred cCHHHHHHHHHHHHHHhCCCHHHHHHHHHHhcc-cCCCCCcccccCCChHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999887743
No 8
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=100.00 E-value=9.6e-54 Score=436.61 Aligned_cols=288 Identities=27% Similarity=0.342 Sum_probs=244.3
Q ss_pred cccCCCccccccccCCc----c-------------------------------ccchhhhcCCCCCCCCccccccccccC
Q psy8141 3 NVASLPHSTKIVHEDKK----T-------------------------------IADTDKHFKPSDNDSSTDQVAPLWQYK 47 (480)
Q Consensus 3 ~~~~lp~~~l~~h~~~~----~-------------------------------~~~~~~f~~~~~~~~~~~~l~~~f~l~ 47 (480)
....+||++||+|++++ + +.++++|+..+|.+.. +++
T Consensus 7 ~~~~~pkaelH~HL~g~l~p~~v~~la~r~gi~~~~~~~~~~~~~~~~~~~~~~~~l~~fl~~~y~~~~--------v~~ 78 (345)
T COG1816 7 LIRHLPKAELHRHLEGSLRPELVLELARRYGIALPPAEFDETILEELRAEYNKFNDLQEFLEKYYRGAS--------VLR 78 (345)
T ss_pred HHhhchhhHhhhcccCCcCHHHHHHHHHHhCccCCcccccchhHHHHHHHHhccccHHHHHHHHHHHHH--------hhc
Confidence 45789999999999974 2 3444444444444333 678
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEEEEEEeccCCChhh--H----HHHHHHHH-HcccccceeeeecccccccChhhhHHH
Q psy8141 48 TISDLSNQKSEVAADLEESKYQNAELRLSIYGKSEDE--W----DKLATWAI-ESNVYSNNIRWLIQIPRLYDIFKSNKL 120 (480)
Q Consensus 48 t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~~~~e--~----~~la~w~~-~~~~~~~~irwiv~i~R~~~~~~~~~~ 120 (480)
+++++.+++.+++++++++|+.|+|+||+||.+...+ . +.+.+.+. ..+.+++..+.+++..|+.+.....
T Consensus 79 ~~~~~~~la~~~~~~~~~~~~vy~Ei~f~p~~~t~~~l~~~~~~e~~~~~~~~~~~~~gi~s~li~~~~r~~~~e~~~-- 156 (345)
T COG1816 79 TEEDFYRLAYEYLEDAAADNVVYAEIRFDPYLHTKRGLSVDTVVEGLIAGFRPAERDFGIHSKLIVCLLRHLGFESAD-- 156 (345)
T ss_pred cHHHHHHHHHHHHHHHHhcCCeEEEEEeCcchhhhccCCHHHHHHHHHHHHHHHhhccCCccceEEEEEeecCHHHHH--
Confidence 9999999999999999999999999999998876555 2 34444443 3567899999999999999884332
Q ss_pred HhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHh
Q psy8141 121 INNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYAN 200 (480)
Q Consensus 121 v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~An 200 (480)
+.++.. ...+-..++|+|+.|+|. ..||+.|...|..+
T Consensus 157 -----~~~~~a----------------~~~~~~~~~~~~l~~~e~--------------------~~p~~~f~~~f~~~- 194 (345)
T COG1816 157 -----EELELA----------------LRYRDKLVTGVGLAGSES--------------------GYPPELFVSLFKLA- 194 (345)
T ss_pred -----HHHHHH----------------hhcccccCccCCCCcccc--------------------cCCHHHHHHHHHHH-
Confidence 222221 112223566999999998 46999999999999
Q ss_pred hhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhc
Q psy8141 201 LTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENI 278 (480)
Q Consensus 201 l~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~ 278 (480)
+..|+++ |+||||+++++++++|+ ++++|||||++
T Consensus 195 --------r~~gl~l---t~HaGE~~~~~~i~~al~~~~~~rI~HGi~-------------------------------- 231 (345)
T COG1816 195 --------RDNGLKL---TIHAGEAGGPESIRDALDLLGAERIGHGIR-------------------------------- 231 (345)
T ss_pred --------HHcCceE---EEeccccCCcHHHHHHHHHhchhhhccccc--------------------------------
Confidence 8999887 99999999999999999 99999999999
Q ss_pred cccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCC
Q psy8141 279 SHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARG 358 (480)
Q Consensus 279 ~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~G 358 (480)
+.++|.|+|++++.||||+|||+||+++++ +.+|.+|||++|+++|
T Consensus 232 -----~~~d~~L~~~l~~~qI~levCP~SNi~~~~-----------------------------v~~~~~hPf~~~~d~G 277 (345)
T COG1816 232 -----AIEDPELLYRLAERQIPLEVCPLSNIQLGV-----------------------------VPSLAKHPFKKLFDAG 277 (345)
T ss_pred -----cccCHHHHHHHHHhCCeeEECCcchhhccc-----------------------------ccchhhCcHHHHHHcC
Confidence 789999999999999999999999998854 6899999999999999
Q ss_pred CcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhcccc
Q psy8141 359 LVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGPNY 422 (480)
Q Consensus 359 l~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~~ 422 (480)
++||||||||++|++ |+++||.+|+++++|+..|+|++|||||.+||+++++|++|++...
T Consensus 278 v~VsLnTDdp~~f~~---~l~~Ey~~aa~~~~l~~~dl~~~arnav~~af~~~~~K~~ll~~~~ 338 (345)
T COG1816 278 VKVSLNTDDPLYFGT---PLIEEYLVAAQIYGLSREDLCELARNAVEAAFISEEEKAALLGKVL 338 (345)
T ss_pred CceEEcCCChhhcCC---chHHHHHHHHHHhCCCHHHHHHHHHHHHHHccCChHHHHHHHHHHH
Confidence 999999999999998 7999999999999999999999999999999999999999999863
No 9
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=100.00 E-value=1.4e-50 Score=416.93 Aligned_cols=291 Identities=21% Similarity=0.232 Sum_probs=237.7
Q ss_pred ccccCCCc-cccccccCCc----cccchh--hhcCCCCCCCCccccccccccCCHHHHHHHHHHHHHHHHHCCceEEEEE
Q psy8141 2 DNVASLPH-STKIVHEDKK----TIADTD--KHFKPSDNDSSTDQVAPLWQYKTISDLSNQKSEVAADLEESKYQNAELR 74 (480)
Q Consensus 2 ~~~~~lp~-~~l~~h~~~~----~~~~~~--~f~~~~~~~~~~~~l~~~f~l~t~~~la~l~~~vi~~l~~~~v~y~Elr 74 (480)
+.++.||| ++||+|++++ |+.++. .|++.++...+ ++++.++|++++++++++++++||+|+|+|
T Consensus 19 ~~~~~lPK~~eLH~Hl~Gsi~~~tl~~la~~~fl~~f~~~~~--------~l~~~~~~~~~~~~~~~d~~~dgV~Y~Eir 90 (345)
T cd01321 19 KIIQKMPKGALLHVHDTAMVSSDWLIKNATYRFEQIFDIIDG--------LLTYLPIFRDYYRRLLEELYEDNVQYVELR 90 (345)
T ss_pred HHHHhCCChHhhccCccccCCHHHHHHHHHHHHHHHHHHHHH--------HhcCHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 44689999 8999999974 555555 45444333222 488999999999999999999999999999
Q ss_pred EeccC---C-----Chhh-HHHHHHHHH----HcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcC
Q psy8141 75 LSIYG---K-----SEDE-WDKLATWAI----ESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTND 141 (480)
Q Consensus 75 ~s~~~---~-----~~~e-~~~la~w~~----~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~ 141 (480)
++|.. + +.++ ++.+.+.+. +... ++.+|+++++.|.++...+...+ +.+...
T Consensus 91 ~~P~~~~~~~~~g~~~~~v~~av~~~~~~~~~~~~~-~i~v~lI~~~~R~~~~e~~~e~~-------~~a~~~------- 155 (345)
T cd01321 91 SSFSPLYDLDGREYDYEETVQLLEEVVEKFKKTHPD-FIGLKIIYATLRNFNDSEIKESM-------EQCLNL------- 155 (345)
T ss_pred ecchHHHHccCCCCCHHHHHHHHHHHHHHHHHhCCC-CceEEEEEEecCCCCHHHHHHHH-------HHHHHH-------
Confidence 99943 2 2333 244443322 2222 67899999999999985444433 222100
Q ss_pred CCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCC--CCCCCcc
Q psy8141 142 SSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARD--LNTFVLR 219 (480)
Q Consensus 142 p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~g--l~~~~l~ 219 (480)
...+...|||||++|+|.. ++|+..|...|.+| ++.| ++. |
T Consensus 156 ------~~~~~~~VvGidL~G~E~~-------------------~~~~~~f~~~f~~a---------r~~g~~l~~---t 198 (345)
T cd01321 156 ------KKKFPDFIAGFDLVGQEDA-------------------GRPLLDFLPQLLWF---------PKQCAEIPF---F 198 (345)
T ss_pred ------HHhCCCeEEEEecCCCccC-------------------CCCHHHHHHHHHHH---------HHhCCCCce---E
Confidence 0124556999999999953 36899999999999 8889 776 9
Q ss_pred cccCCCCC-----hhhHHHHh-hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHH
Q psy8141 220 PHCGEAGP-----IQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYL 293 (480)
Q Consensus 220 ~HaGE~~~-----~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl 293 (480)
+||||.++ ++++++|+ ++++|||||++ +.++|.|+.+
T Consensus 199 ~HAGE~~~~~~~~~~~v~~al~lg~~RIGHG~~-------------------------------------~~~dp~ll~~ 241 (345)
T cd01321 199 FHAGETNGDGTETDENLVDALLLNTKRIGHGFA-------------------------------------LPKHPLLMDL 241 (345)
T ss_pred eecCCCcCCCCCChhHHHHHHHhCCCcCccccc-------------------------------------cCcCHHHHHH
Confidence 99999974 67999999 99999999999 7789999999
Q ss_pred HHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCC
Q psy8141 294 YYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHF 373 (480)
Q Consensus 294 ~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~ 373 (480)
.+.++|||||||+||..++. +.++.+||+++|+++|++|+||||||++|++
T Consensus 242 l~~~~I~lEvCPtSN~~~~~-----------------------------v~~~~~HPl~~ll~~Gv~vtinTDDp~~f~t 292 (345)
T cd01321 242 VKKKNIAIEVCPISNQVLGL-----------------------------VSDLRNHPAAALLARGVPVVISSDDPGFWGA 292 (345)
T ss_pred HHHcCCeEEECcchhhhhcc-----------------------------ccchhhChHHHHHHCCCeEEEeCCCcchhCC
Confidence 99999999999999999864 4679999999999999999999999999998
Q ss_pred -CCcChHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChHHHHHHhccc
Q psy8141 374 -TKEPLMEEYSIAAQVWK---LSSCDMCELARNSVLMSGFPHGMKQYWLGPN 421 (480)
Q Consensus 374 -T~epL~eEY~~aa~~~~---Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~ 421 (480)
| |++||..+++.++ |+.+||.+|++||+.+||+++++|+.++...
T Consensus 293 ~~---l~~Ey~~~~~~~g~~~l~~~~l~~l~~nsi~~sF~~~~~K~~l~~~~ 341 (345)
T cd01321 293 KG---LSHDFYQAFMGLAPADAGLRGLKQLAENSIRYSALSDQEKDEAVAKW 341 (345)
T ss_pred CC---chHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 6 9999999999999 9999999999999999999999999998654
No 10
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=100.00 E-value=4.7e-50 Score=408.19 Aligned_cols=289 Identities=30% Similarity=0.371 Sum_probs=219.9
Q ss_pred CCccccccccCCc----cccchhhhcCCCCCCCC-cc-------------ccc---ccc-----ccC---CHHHHHHHHH
Q psy8141 7 LPHSTKIVHEDKK----TIADTDKHFKPSDNDSS-TD-------------QVA---PLW-----QYK---TISDLSNQKS 57 (480)
Q Consensus 7 lp~~~l~~h~~~~----~~~~~~~f~~~~~~~~~-~~-------------~l~---~~f-----~l~---t~~~la~l~~ 57 (480)
+||++||+|++++ ++.++.+-.+..+.+.. .. .+. +.| .++ +.++++++++
T Consensus 2 ~pK~eLH~HL~Gsi~~~~l~ela~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (331)
T PF00962_consen 2 LPKAELHIHLDGSISPETLLELAKKNNICELPADTDEELEKHLTRPENFRSLNEFLELFDIISSVLQADRTPEDLRRYAY 81 (331)
T ss_dssp S-EEEEEEEGGGSS-HHHHHHHHHHCTCC-TTSCSSHHHHHHHHCTSSCSSHHHHHHHHHHHHHHHTCSTSHHHHHHHHH
T ss_pred CCEEEeeeCCccCCCHHHHHHHHHhCCCCccccccchhhhhHHhhhhhcccHHHHHHHHHHhhhhhhhcccHHHHHHHHH
Confidence 7999999999974 55555544222211111 00 011 111 356 8999999999
Q ss_pred HHHHHHHHCCceEEEEEEeccCC-------Chhh-HHHHHHHHHH-cccccceeeeecccccccChhhhHHHHhhHHHHH
Q psy8141 58 EVAADLEESKYQNAELRLSIYGK-------SEDE-WDKLATWAIE-SNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEIL 128 (480)
Q Consensus 58 ~vi~~l~~~~v~y~Elr~s~~~~-------~~~e-~~~la~w~~~-~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L 128 (480)
+++++++++||+|+|+|++|... +..+ .+.+.+++.+ .+.+++.++++++..|..+.... ++.+
T Consensus 82 ~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~~~~~~a~~~~~i~~~li~~~~R~~~~~~~-------~~~~ 154 (331)
T PF00962_consen 82 EVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAIIEGIDRAEKEFGIKVRLIISVLRHFPDEWA-------EEIV 154 (331)
T ss_dssp HHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTSTHHHH-------HHHH
T ss_pred HHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHHhhhhhccccccccccccccccccchHHHH-------HHHH
Confidence 99999999999999999998542 1223 3455555443 34456899999999999755322 2222
Q ss_pred HHHhhhhHhhhcCCCCChhhhcccC-ceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHH
Q psy8141 129 QNIFKPLFEVTNDSSSHPHLHKFLQ-YVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHF 207 (480)
Q Consensus 129 ~~if~pL~~a~~~p~~~~~l~~fl~-~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~ 207 (480)
+. ..++.+ .|||||++|+|.. .||..|...|..|
T Consensus 155 ~~-----------------~~~~~~~~vvG~dl~g~E~~--------------------~~~~~~~~~~~~a-------- 189 (331)
T PF00962_consen 155 EL-----------------ASKYPDKGVVGFDLAGDEDG--------------------GPPLKFAPAFRKA-------- 189 (331)
T ss_dssp HH-----------------HHHTTTTTEEEEEEESSTTS--------------------TTGGGHHHHHHHH--------
T ss_pred HH-----------------HhhcccceEEEEEecCCccc--------------------CchHHHHHHHhhh--------
Confidence 22 124554 8999999999984 4888899999999
Q ss_pred HHHCCCCCCCcccccCCCCChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhcccccccc
Q psy8141 208 RRARDLNTFVLRPHCGEAGPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLR 285 (480)
Q Consensus 208 r~~~gl~~~~l~~HaGE~~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~ 285 (480)
+..|++. |+||||.++++++++|+ ++++|||||++ +.
T Consensus 190 -~~~gl~~---t~HaGE~~~~~~~~~ai~~l~~~RIgHG~~-------------------------------------~~ 228 (331)
T PF00962_consen 190 -REAGLKL---TVHAGETGGPEHIRDAILLLGADRIGHGVR-------------------------------------LI 228 (331)
T ss_dssp -HHTT-EE---EEEESSSSTHHHHHHHHHTST-SEEEE-GG-------------------------------------GG
T ss_pred -cccceee---cceecccCCcccccchhhhccceeecchhh-------------------------------------hh
Confidence 9999776 99999999999999999 69999999999 67
Q ss_pred CChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcC
Q psy8141 286 KAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLST 365 (480)
Q Consensus 286 ~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsT 365 (480)
++|.|+++++.++|||||||+||..++. +.+|.+|||++|+++|++|||||
T Consensus 229 ~~p~l~~~~~~~~I~iEvcptSN~~~~~-----------------------------~~~~~~hP~~~~~~~gv~v~i~T 279 (331)
T PF00962_consen 229 KDPELLELLAERQIPIEVCPTSNVQLGA-----------------------------VPSYEEHPLRKLLDAGVPVSINT 279 (331)
T ss_dssp GSHHHHHHHHHTT-EEEE-HHHHHHTTS-----------------------------SSTGGG-CHHHHHHTT-EEEE--
T ss_pred hhhHHHHHHHHhCCCeeeCCCcCcccce-----------------------------eeecchhHHHHHHHcCCceeccC
Confidence 8999999999999999999999999864 56899999999999999999999
Q ss_pred CCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhcc
Q psy8141 366 DDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGP 420 (480)
Q Consensus 366 DDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~ 420 (480)
|||++|++| |++||..|++.|+||.+|+++|++|||.+||+++++|++|+++
T Consensus 280 Dd~~~~~~~---l~~ey~~~~~~~~l~~~~l~~l~~nsi~~sf~~~~~K~~ll~~ 331 (331)
T PF00962_consen 280 DDPGVFGTT---LSDEYYLAAEAFGLSLADLKQLARNSIEASFLSEEEKAELLAK 331 (331)
T ss_dssp BSHHHHT-S---HHHHHHHHHHHHT--HHHHHHHHHHHHHCSSS-HHHHHHHHHC
T ss_pred CCccccCCC---cHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHhcC
Confidence 999999996 9999999999999999999999999999999999999999863
No 11
>PTZ00124 adenosine deaminase; Provisional
Probab=100.00 E-value=1.7e-49 Score=410.72 Aligned_cols=291 Identities=15% Similarity=0.135 Sum_probs=232.1
Q ss_pred cccCCCccccccccCCc----cccchhhhcCCCCCCCCccc-------------ccccc--------ccCCHHHHHHHHH
Q psy8141 3 NVASLPHSTKIVHEDKK----TIADTDKHFKPSDNDSSTDQ-------------VAPLW--------QYKTISDLSNQKS 57 (480)
Q Consensus 3 ~~~~lp~~~l~~h~~~~----~~~~~~~f~~~~~~~~~~~~-------------l~~~f--------~l~t~~~la~l~~ 57 (480)
.+++|||++||+|+||+ |+.++.+-.+. ..|.+..+ |.+.| +++|.++|+++++
T Consensus 31 ~~~~lPKvELH~HLdGsi~~~tl~~La~~~~~-~~~~~~~~l~~~~~~~~~~~~L~~fl~~f~~~~~vl~t~~dl~r~a~ 109 (362)
T PTZ00124 31 IWKRIPKCELHCHLDLCFSVDFFLSCIRKYNL-QPNLSDEEILDYYLFAKGGKSLGEFVEKAIRVADIFNDYEVIEDLAK 109 (362)
T ss_pred HHhcCCceeEeecccCCCCHHHHHHHHHHcCC-CCCCCHHHHHHHHhcccCCCCHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 46789999999999964 66666654222 11211111 11111 5789999999999
Q ss_pred HHHHHHHHCCceEEEEEEeccCC-Ch-----hh-HHHHHHHHHH-cc--cccceeeeecccccccChhhhHHHHhhHHHH
Q psy8141 58 EVAADLEESKYQNAELRLSIYGK-SE-----DE-WDKLATWAIE-SN--VYSNNIRWLIQIPRLYDIFKSNKLINNFQEI 127 (480)
Q Consensus 58 ~vi~~l~~~~v~y~Elr~s~~~~-~~-----~e-~~~la~w~~~-~~--~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~ 127 (480)
+++++++++||.|+|+|++|+.+ .. .+ ++.+.+.+.+ .. .+++.++||+++.|..+...+...
T Consensus 110 e~~~d~~~dgV~Y~Eir~~P~~~~~~~gl~~~~vv~av~~g~~~a~~~~~~gI~~~lI~~~~R~~~~e~a~e~------- 182 (362)
T PTZ00124 110 HAVFNKYKEGVVLMEFRYSPTFVAFKHNLDIDLIHQAIVKGIKEAVELLDHKIEVGLLCIGDTGHDAAPIKES------- 182 (362)
T ss_pred HHHHHHHHcCCEEEEEEcCchhhhcCCCCCHHHHHHHHHHHHHHHHhccCCCceEeEEEEecCCCCHHHHHHH-------
Confidence 99999999999999999999542 21 22 2444444432 22 478999999999999887544332
Q ss_pred HHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHH
Q psy8141 128 LQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHF 207 (480)
Q Consensus 128 L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~ 207 (480)
++.+ ..+.+.|||||++|+|.. . ..|...|.+|
T Consensus 183 ~~~a-----------------~~~~~~vvGiDLaG~E~~--------------------~--~~f~~~f~~A-------- 215 (362)
T PTZ00124 183 ADFC-----------------LKHKADFVGFDHAGHEVD--------------------L--KPFKDIFDYV-------- 215 (362)
T ss_pred HHHH-----------------HhccCCeEEEeccCCCCC--------------------c--HHHHHHHHHH--------
Confidence 2332 123445999999999973 1 3488899999
Q ss_pred HHHCCCCCCCcccccCCCCC-h--hhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccc
Q psy8141 208 RRARDLNTFVLRPHCGEAGP-I--QHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGL 282 (480)
Q Consensus 208 r~~~gl~~~~l~~HaGE~~~-~--~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~ 282 (480)
++.|++. |+||||.++ + .++++|+ ++++|||||++
T Consensus 216 -r~~Gl~~---t~HaGE~~~~~~~~~v~~ai~~l~~~RIGHG~~------------------------------------ 255 (362)
T PTZ00124 216 -REAGVNL---TVHAGEDVTLPNLNTLYSAIQVLKVKRIGHGIR------------------------------------ 255 (362)
T ss_pred -HHCCCCE---EEEeCCCCCCCcchhHHHHHHHhCCCccccccc------------------------------------
Confidence 9999886 999999853 3 4677888 89999999999
Q ss_pred cccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEE
Q psy8141 283 LLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVS 362 (480)
Q Consensus 283 ~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~Vs 362 (480)
+.++|.|+..++.++|||||||+||..++. +.++.+||++.|++.|++|+
T Consensus 256 -~~~d~~l~~~l~~~~I~lEvCPtSN~~~~~-----------------------------v~~~~~HPi~~l~~~Gv~v~ 305 (362)
T PTZ00124 256 -VAESQELIDMVKEKDILLEVCPISNVLLNN-----------------------------AKSMDTHPIRKLYDAGVKVS 305 (362)
T ss_pred -cCCCHHHHHHHHHcCCeEEECCcchhhhhc-----------------------------CCchhhHHHHHHHHCCCcEE
Confidence 678999999999999999999999999864 46789999999999999999
Q ss_pred EcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhccc
Q psy8141 363 LSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGPN 421 (480)
Q Consensus 363 LsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~ 421 (480)
||||||++|++| |++||..+++.|||+.+|+.+|++||+.+||.++++|+.|+...
T Consensus 306 InTDDp~~~~t~---l~~Ey~~~~~~~gls~~~l~~l~~nai~asF~~~~~K~~l~~~~ 361 (362)
T PTZ00124 306 VNSDDPGMFLTN---INDDYEELYTHLNFTLADFMKMNEWALEKSFLDKDIKLKIKKLY 361 (362)
T ss_pred EeCCCccccCCC---hhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 999999999985 99999999999999999999999999999999999999998654
No 12
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=100.00 E-value=2.1e-49 Score=401.58 Aligned_cols=287 Identities=33% Similarity=0.445 Sum_probs=235.6
Q ss_pred CCccccccccCCc----cccchh--hhcCCCCCCCCccccccccccCCHHHHHHHHHHHHHHHHHCCceEEEEEEeccCC
Q psy8141 7 LPHSTKIVHEDKK----TIADTD--KHFKPSDNDSSTDQVAPLWQYKTISDLSNQKSEVAADLEESKYQNAELRLSIYGK 80 (480)
Q Consensus 7 lp~~~l~~h~~~~----~~~~~~--~f~~~~~~~~~~~~l~~~f~l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~ 80 (480)
+||++||+|++|+ |+.++. +|++.+....+ ++++.++|++++++++++++++||+|+|+|++|+.+
T Consensus 1 lPK~eLH~Hl~Gsi~~~~l~~l~~~~f~~~f~~~~~--------~l~~~~~l~~~~~~~~~~~~~d~V~Y~E~r~~p~~~ 72 (305)
T cd00443 1 LPKVELHAHLSGSISPETLLELIKKEFFEKFLLVHN--------LLQKGEALARALKEVIEEFAEDNVQYLELRTTPRLL 72 (305)
T ss_pred CCceeEEecCcCCCCHHHHHHHHHHHHHHHHHHHHH--------HhCCHHHHHHHHHHHHHHHHHcCCEEEEEEcchhhc
Confidence 6999999999974 666666 55444432222 479999999999999999999999999999999865
Q ss_pred Chh-h------HHHHHHHHHH-ccccc-ceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcc
Q psy8141 81 SED-E------WDKLATWAIE-SNVYS-NNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKF 151 (480)
Q Consensus 81 ~~~-e------~~~la~w~~~-~~~~~-~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~f 151 (480)
... + |+.+.+.+.+ .+.++ +.+++++++.|..+...... ...++++.. ..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~lI~~~~R~~~~~~~~~---~~~~~~~l~-----------------~~~ 132 (305)
T cd00443 73 ETEKGLTKEQYWLLVIEGISEAKQWFPPIKVRLILSVDRRGPYVQNYL---VASEILELA-----------------KFL 132 (305)
T ss_pred CcccCCCHHHHHHHHHHHHHHHHHHcCCeeEeEEEEEeCCCChhhhhh---hHHHHHHHH-----------------HHh
Confidence 443 3 3333333332 23345 89999999999998741100 112222221 134
Q ss_pred cCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCC-CCCCCcccccCCCCChhh
Q psy8141 152 LQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARD-LNTFVLRPHCGEAGPIQH 230 (480)
Q Consensus 152 l~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~g-l~~~~l~~HaGE~~~~~~ 230 (480)
.+.|||||++|+|... .+|+..|..+|.+| ++.| ++. |+||||.+++++
T Consensus 133 ~~~vvG~Dl~g~E~~~------------------~~~~~~f~~~~~~a---------r~~g~l~~---t~HaGE~~~~~~ 182 (305)
T cd00443 133 SNYVVGIDLVGDESKG------------------ENPLRDFYSYYEYA---------RRLGLLGL---TLHCGETGNREE 182 (305)
T ss_pred cCCEEEEEcCCCCCCC------------------CCCHHHHHHHHHHH---------HHcCCcce---EEeecCCCChHH
Confidence 4569999999999853 25899999999999 8889 776 999999999999
Q ss_pred HHHHh-hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCch
Q psy8141 231 LVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNN 309 (480)
Q Consensus 231 l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~ 309 (480)
+.+++ .+++|||||+. +.++|.++++++.+|||||+||+||.
T Consensus 183 v~~~~~~~~~RIgHg~~-------------------------------------~~~~p~~~~~l~~~~i~ie~CP~SN~ 225 (305)
T cd00443 183 LLQALLLLPDRIGHGIF-------------------------------------LLKHPELIYLVKLRNIPIEVCPTSNV 225 (305)
T ss_pred HHHHHHhccceeeceEe-------------------------------------cCCCHHHHHHHHHcCCEEEECcchhh
Confidence 99999 55999999999 67899999999999999999999999
Q ss_pred hhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHc
Q psy8141 310 SLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVW 389 (480)
Q Consensus 310 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~ 389 (480)
.++. ..++..||+++|++.|++|+||||||++|++ +|++||..+++.+
T Consensus 226 ~~~~-----------------------------~~~~~~hP~~~~~~~G~~v~i~TDd~~~~~~---~l~~E~~~~~~~~ 273 (305)
T cd00443 226 VLGT-----------------------------VQSYEKHPFMRFFKAGLPVSLSTDDPGIFGT---SLSEEYSLAAKTF 273 (305)
T ss_pred hhcC-----------------------------CCChhhChHHHHHHCCCeEEEeCCCCcccCC---ChHHHHHHHHHHc
Confidence 9864 3578999999999999999999999999998 5999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCChHHHHHHhcc
Q psy8141 390 KLSSCDMCELARNSVLMSGFPHGMKQYWLGP 420 (480)
Q Consensus 390 ~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~ 420 (480)
+|+.+|+++|++||+.+||+++++|++|++.
T Consensus 274 ~l~~~~l~~l~~nsi~~sf~~~~~K~~l~~~ 304 (305)
T cd00443 274 GLTFEDLCELNRNSVLSSFAKDEEKKSLLEV 304 (305)
T ss_pred CcCHHHHHHHHHHHHHHhcCCHHHHHHHHhc
Confidence 9999999999999999999999999999864
No 13
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=100.00 E-value=1.7e-44 Score=385.04 Aligned_cols=271 Identities=19% Similarity=0.223 Sum_probs=220.7
Q ss_pred ccCCHHHHHHHHHHHHHHHHHCCceEEEEEEecc------CC--Chhh-HHHHHHHHHHcc-cc--cceeeeeccccccc
Q psy8141 45 QYKTISDLSNQKSEVAADLEESKYQNAELRLSIY------GK--SEDE-WDKLATWAIESN-VY--SNNIRWLIQIPRLY 112 (480)
Q Consensus 45 ~l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~------~~--~~~e-~~~la~w~~~~~-~~--~~~irwiv~i~R~~ 112 (480)
++++.++++++++++++++++|||+|+|+|++|. |. +..+ ++.+.+.+.+.+ .. .+.+++|.++.|.+
T Consensus 188 ll~y~p~~~~~~~~~l~d~~~DgV~Y~ElR~~p~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~fi~~rlI~~~~R~~ 267 (479)
T TIGR01431 188 LLFYAPSWRDYYYRALEEFYADNVQYLELRSTLFILYELEGTSHDEEDSVRIYKEVTEKFMAEHPDFIGSKLIYSPLRNK 267 (479)
T ss_pred HHcCHHHHHHHHHHHHHHHHHcCCEEEEEEecCchHhhcCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEEEEccCCC
Confidence 3567889999999999999999999999999982 11 2223 344443333211 12 46889999999999
Q ss_pred ChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhH
Q psy8141 113 DIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAY 192 (480)
Q Consensus 113 ~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f 192 (480)
++......+ +.++.. ...|++.||||||+|+|.. +.|+..|
T Consensus 268 ~~~~~~~~~---~~a~~~-----------------k~~~p~~vvGfDL~G~E~~-------------------g~pl~~f 308 (479)
T TIGR01431 268 DKEELDNYI---KVAMEL-----------------KEKYPDFVAGFDLVGQEDK-------------------GRSLLDF 308 (479)
T ss_pred CHHHHHHHH---HHHHHH-----------------HhhCCCeEEEEeccCCCCC-------------------CCCHHHH
Confidence 985444333 333211 1257778999999999964 4688999
Q ss_pred HHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCC-----ChhhHHHHh-hcccccccccccccccchhhhhhhhcccchh
Q psy8141 193 YQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAG-----PIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQ 266 (480)
Q Consensus 193 ~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~-----~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~ 266 (480)
...+.++ ++..|+ +|++||||++ .++|+++|+ ||++|||||++
T Consensus 309 ~~~~~~~--------~~~~gl---~~t~HAGE~~~~g~~~d~nl~dAIlLg~~RIGHG~~-------------------- 357 (479)
T TIGR01431 309 IDALLGP--------SDKEKL---PYFFHAGETNWQGTTVDENLIDALLLNTTRIGHGFA-------------------- 357 (479)
T ss_pred HHHHHHH--------HHhCCC---CEEEecCCcCCCCCCchhHHHHHHHcCCccccCccc--------------------
Confidence 9888764 133664 5599999996 368999999 99999999999
Q ss_pred hhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccc
Q psy8141 267 HLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNY 346 (480)
Q Consensus 267 ~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy 346 (480)
+.++|.|+.+.+.++|+|||||+||..|++ +.++
T Consensus 358 -----------------l~~~P~l~~~vke~~I~lEvCP~SN~~l~~-----------------------------v~~~ 391 (479)
T TIGR01431 358 -----------------LVKHPLVLQMLKERNIAVEVNPISNQVLQL-----------------------------VADL 391 (479)
T ss_pred -----------------ccCCHHHHHHHHHhCCeEEECccchhhhcc-----------------------------cCCc
Confidence 789999999999999999999999999865 4689
Q ss_pred cCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChHHHHHHhccccc
Q psy8141 347 HRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK---LSSCDMCELARNSVLMSGFPHGMKQYWLGPNYT 423 (480)
Q Consensus 347 ~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~---Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~~~ 423 (480)
..||++.|+++|+||+||||||++|++| +|++||..|.+.++ ++..+|.+||+|||++||+++++|+.++
T Consensus 392 ~~HPl~~lla~Gvpv~InSDDP~~~~~t--~Ls~ef~~a~~~~~~~~~~l~~L~~la~NSi~~Sfl~~~eK~~~~----- 464 (479)
T TIGR01431 392 RNHPCAYLFADNYPMVISSDDPAFWGAT--PLSHDFYIAFMGLASAKADLRTLKQLALNSIKYSALSEEEKRTAL----- 464 (479)
T ss_pred ccChHHHHHHCCCcEEEeCCCccccCCC--CchHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHCCCHHHHHHHH-----
Confidence 9999999999999999999999999974 79999999999998 7999999999999999999999997664
Q ss_pred ccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHh
Q psy8141 424 KEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFRVFK 461 (480)
Q Consensus 424 ~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~~~~~~ 461 (480)
+.|..+|+.||++++
T Consensus 465 -----------------------~~~~~~W~~f~~~~~ 479 (479)
T TIGR01431 465 -----------------------AKWQKQWDKFIDEVL 479 (479)
T ss_pred -----------------------HHHHHHHHHHHHHhC
Confidence 458999999999873
No 14
>KOG1097|consensus
Probab=100.00 E-value=1.1e-44 Score=371.32 Aligned_cols=257 Identities=21% Similarity=0.255 Sum_probs=216.9
Q ss_pred cCCHHHHHHHHHHHHHHHHHCCceEEEEE-EeccCCCh------hh-HHHHHHHHH-HcccccceeeeecccccccChhh
Q psy8141 46 YKTISDLSNQKSEVAADLEESKYQNAELR-LSIYGKSE------DE-WDKLATWAI-ESNVYSNNIRWLIQIPRLYDIFK 116 (480)
Q Consensus 46 l~t~~~la~l~~~vi~~l~~~~v~y~Elr-~s~~~~~~------~e-~~~la~w~~-~~~~~~~~irwiv~i~R~~~~~~ 116 (480)
+...++|+++++++++++++|||+|+|+| +.|..++. ++ ...+.+.+. ....+++..|.|.|+.|..+.+.
T Consensus 113 l~~~~~~~~~~y~~~eef~~dgVvY~E~Rt~~p~l~~~~G~~t~e~~v~~~~~~~e~~~~~fpI~sklI~~~~R~~~~e~ 192 (399)
T KOG1097|consen 113 LIYAPAFRDYAYEALEEFAEDGVVYLEVRTYPPQLYTADGDITPEDVVAIVIAALEKAKRDFPIKSKLIMCCIRHMPPEV 192 (399)
T ss_pred HhhHHHHHHHHHHHHHHHHHcCceEEEEEccCchhhhcCCCCCHHHHHHHHHHHHHHHHHhCCCcceEEEeeccCCChHH
Confidence 45667999999999999999999999999 66654432 22 233444433 34567899999999999999976
Q ss_pred hHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhh-cccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHH
Q psy8141 117 SNKLINNFQEILQNIFKPLFEVTNDSSSHPHLH-KFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQY 195 (480)
Q Consensus 117 ~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~-~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~y 195 (480)
+.+.+.. +.+ ++ .+...|+||||+|+|.. ++|++.|...
T Consensus 193 ~~e~v~~---~~~------------------~~~~~~~~VvGidL~G~e~~-------------------~~p~~~f~~v 232 (399)
T KOG1097|consen 193 AEETVSE---AKE------------------LNKLFPNFVVGIDLVGQEDL-------------------GGPLSLFLEV 232 (399)
T ss_pred HHHHHHH---HHH------------------HHHhCCCeEEEEecCCCCCC-------------------CCChhhhHHH
Confidence 6555532 221 22 46788999999999974 5799999999
Q ss_pred HHHHhhhhhhHHHHHCCCCCCCcccccCCC-CChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhc
Q psy8141 196 YTYANLTVLNHFRRARDLNTFVLRPHCGEA-GPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGF 272 (480)
Q Consensus 196 y~~Anl~~LN~~r~~~gl~~~~l~~HaGE~-~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~ 272 (480)
+.++ ++.|++. |.||||. ++++.+.+++ |+++|||||++
T Consensus 233 l~~~---------~~~gi~~---t~HaGE~~~~~~~v~~~LD~l~~~RIGHG~~-------------------------- 274 (399)
T KOG1097|consen 233 LAKA---------PAKGIHL---TFHAGETNGGASVVKNALDLLGTERIGHGYF-------------------------- 274 (399)
T ss_pred HHhh---------hhcCCcE---EEEccccCCChHHHHHHHHhhCCccccCcee--------------------------
Confidence 9998 7788765 9999999 5777666666 99999999999
Q ss_pred hhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchH
Q psy8141 273 MMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLP 352 (480)
Q Consensus 273 l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~ 352 (480)
+.++|.|..+....+|+|||||+||+.+++ +.++..||+.
T Consensus 275 -----------l~~dp~L~~~~k~~nI~lEiCP~SN~vl~~-----------------------------v~d~rnhp~~ 314 (399)
T KOG1097|consen 275 -----------LTKDPELINLLKSRNIALEICPISNQVLGL-----------------------------VSDLRNHPVA 314 (399)
T ss_pred -----------ccCCHHHHHHHHhcCceEEEccchhhheec-----------------------------cccccccHHH
Confidence 788999999999999999999999999875 5789999999
Q ss_pred HHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcC--CCHHHHHHHHHHHHHHcCCChHHHHHHhcccc
Q psy8141 353 EYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK--LSSCDMCELARNSVLMSGFPHGMKQYWLGPNY 422 (480)
Q Consensus 353 ~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~--Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~~ 422 (480)
.|+++|+||+||||||++|+.+ ||++||..|+...+ ++...+..+|+||+.+||+++++|.+++....
T Consensus 315 ~~~~~~vP~vI~sDDP~~f~~~--~Lt~dfy~A~~~~~~~~~~~~l~~la~nai~~S~l~eeek~~~l~~~~ 384 (399)
T KOG1097|consen 315 RLLAAGVPVVINSDDPGFFGAA--PLTLDFYLAFLGIAPNLDLRELKRLALNAIKYSFLSEEEKNELLERVQ 384 (399)
T ss_pred HHHhCCCCEEEeCCCcccccCc--cccHHHHHHHHhccccCCHHHHHHHHHHHhhhccCCHHHHHHHHHHHh
Confidence 9999999999999999999986 89999999999876 99999999999999999999999999987653
No 15
>PRK09358 adenosine deaminase; Provisional
Probab=100.00 E-value=8e-39 Score=327.80 Aligned_cols=297 Identities=24% Similarity=0.276 Sum_probs=231.5
Q ss_pred ccccCCCccccccccCCc----cccchhhhcCCCCCCCCcccc------------cccc--------ccCCHHHHHHHHH
Q psy8141 2 DNVASLPHSTKIVHEDKK----TIADTDKHFKPSDNDSSTDQV------------APLW--------QYKTISDLSNQKS 57 (480)
Q Consensus 2 ~~~~~lp~~~l~~h~~~~----~~~~~~~f~~~~~~~~~~~~l------------~~~f--------~l~t~~~la~l~~ 57 (480)
+.+++|||++||+|++++ |+.++.+..+...+....+++ .+++ ++.|++++++.++
T Consensus 5 ~~~~~lpK~eLH~Hl~Gs~~~~~l~~l~~~~~~~~p~~~~~~~~~~r~~~~~~~l~~~l~~~~~~~~~~~t~ed~~~~~~ 84 (340)
T PRK09358 5 MIIRSLPKAELHLHLDGSLRPETILELARRNGIALPATDVEELPWVRAAYDFRDLQSFLDKYDAGVAVLQTEEDLRRLAF 84 (340)
T ss_pred HHHhcCCceeEEecccCCCCHHHHHHHHHHcCCCCCCCCHHHHhhhcccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 567899999999999964 565565542222211111111 1111 3578899999999
Q ss_pred HHHHHHHHCCceEEEEEEeccCCChh-----h-HHHHHHHHH-HcccccceeeeecccccccChhhhHHHHhhHHHHHHH
Q psy8141 58 EVAADLEESKYQNAELRLSIYGKSED-----E-WDKLATWAI-ESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQN 130 (480)
Q Consensus 58 ~vi~~l~~~~v~y~Elr~s~~~~~~~-----e-~~~la~w~~-~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~ 130 (480)
.++.++.++||.|+|+|++|+.+... + .+.+.+.+. ....++++++++.++.|..+...... ...++++
T Consensus 85 ~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~~~gi~~~li~~~~r~~~~~~~~~---~~~~~~~- 160 (340)
T PRK09358 85 EYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEAEFGISVRLILCFMRHFGEEAAAR---ELEALAA- 160 (340)
T ss_pred HHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHHhcCceEEEEEEecCCCCHHHHHH---HHHHHHH-
Confidence 99999999999999999999754322 2 233333332 23456889999999999776532211 1122111
Q ss_pred HhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHH
Q psy8141 131 IFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRA 210 (480)
Q Consensus 131 if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~ 210 (480)
..+...|+|||++|+|.. .++..|...+..| ++
T Consensus 161 ------------------~~~~~~vvg~~l~g~e~~--------------------~~~~~~~~~~~~A---------~~ 193 (340)
T PRK09358 161 ------------------RYRDDGVVGFDLAGDELG--------------------FPPSKFARAFDRA---------RD 193 (340)
T ss_pred ------------------HhcCCcEEEEeCCCcCCC--------------------CCHHHHHHHHHHH---------HH
Confidence 113356999999998873 4778899999999 89
Q ss_pred CCCCCCCcccccCCCCChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCCh
Q psy8141 211 RDLNTFVLRPHCGEAGPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAP 288 (480)
Q Consensus 211 ~gl~~~~l~~HaGE~~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p 288 (480)
.|++. +.||||.++++++..++ +|++|||||+. +.++|
T Consensus 194 ~g~~~---~~H~~E~~~~~~~~~al~~lg~~ri~Hg~~-------------------------------------l~~~~ 233 (340)
T PRK09358 194 AGLRL---TAHAGEAGGPESIWEALDELGAERIGHGVR-------------------------------------AIEDP 233 (340)
T ss_pred CCCCe---EEcCCCCCchhHHHHHHHHcCCcccchhhh-------------------------------------hccCH
Confidence 99776 99999998888999888 89999999999 56678
Q ss_pred HHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCc
Q psy8141 289 VLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDP 368 (480)
Q Consensus 289 ~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDP 368 (480)
.+..++..++|++++||+||..++. +.++..||+++|+++|++|+||||||
T Consensus 234 ~~~~~l~~~gi~v~~cP~Sn~~l~~-----------------------------~~~~~~~pi~~l~~~Gv~v~lgTD~~ 284 (340)
T PRK09358 234 ALMARLADRRIPLEVCPTSNVQTGA-----------------------------VPSLAEHPLKTLLDAGVRVTINTDDP 284 (340)
T ss_pred HHHHHHHHcCCeEEECCCccccccc-----------------------------cCCcccChHHHHHHCCCEEEECCCCC
Confidence 8888888999999999999998754 34678899999999999999999999
Q ss_pred cCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhccc
Q psy8141 369 LQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGPN 421 (480)
Q Consensus 369 l~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~ 421 (480)
.++++ +|.+||..+++.++|+.+|+.++++||+.+||+++++|++|+...
T Consensus 285 ~~~~~---~l~~e~~~~~~~~~l~~~el~~l~~nai~~sf~~~~~k~~l~~~~ 334 (340)
T PRK09358 285 LVFGT---TLTEEYEALAEAFGLSDEDLAQLARNALEAAFLSEEEKAALLAEV 334 (340)
T ss_pred cccCC---CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 99886 599999999999999999999999999999999999999998654
No 16
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=100.00 E-value=2.8e-36 Score=307.14 Aligned_cols=250 Identities=23% Similarity=0.260 Sum_probs=203.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHCCceEEEEEEeccCCChhh------HHHHHHHHH-HcccccceeeeecccccccChhhhH
Q psy8141 46 YKTISDLSNQKSEVAADLEESKYQNAELRLSIYGKSEDE------WDKLATWAI-ESNVYSNNIRWLIQIPRLYDIFKSN 118 (480)
Q Consensus 46 l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~~~~e------~~~la~w~~-~~~~~~~~irwiv~i~R~~~~~~~~ 118 (480)
+.|++++++.++.++.++.++|+.|+|+|++|+.+...+ .+.+.+.+. ....++..+++++++.|..++...
T Consensus 64 ~~t~e~l~~~~~~~~~e~~~~Gv~y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi~~~li~~~~r~~~~~~~- 142 (324)
T TIGR01430 64 LRTEDDFKRLAYEYVEKAAKDGVVYAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGIKSRLILCGMRHKQPEAA- 142 (324)
T ss_pred hCCHHHHHHHHHHHHHHHHHcCCEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEEeCCCCHHHH-
Confidence 478899999999999999999999999999997543322 222222322 234568888999999997655321
Q ss_pred HHHhhHHHHHHHHhhhhHhhhcCCCCChhhhccc-CceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHH
Q psy8141 119 KLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFL-QYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYT 197 (480)
Q Consensus 119 ~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl-~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~ 197 (480)
.+.++.+ ..+. ..|+|||+.++|.. .|+..|...+.
T Consensus 143 ------~~~~~~~-----------------~~~~~~~vvg~~l~~~e~~--------------------~~~~~~~~~~~ 179 (324)
T TIGR01430 143 ------EETLELA-----------------KPYKEQTIVGFGLAGDERG--------------------GPPPDFVRAFA 179 (324)
T ss_pred ------HHHHHHH-----------------HhhccCcEEEecCCCCCCC--------------------CCHHHHHHHHH
Confidence 2222221 1222 24899999998762 46778889999
Q ss_pred HHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhh
Q psy8141 198 YANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMA 275 (480)
Q Consensus 198 ~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~ 275 (480)
.| ++.|++. +.||||.+++.++..++ +|++||+||+.
T Consensus 180 ~A---------~~~g~~i---~~Ha~E~~~~~~~~~~~~~~g~~ri~Hg~~----------------------------- 218 (324)
T TIGR01430 180 IA---------RELGLHL---TVHAGELGGPESVREALDDLGATRIGHGVR----------------------------- 218 (324)
T ss_pred HH---------HHCCCCe---EEecCCCCChHHHHHHHHHcCchhcchhhh-----------------------------
Confidence 99 8899876 99999998887888887 89999999999
Q ss_pred hhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHH
Q psy8141 276 ENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYL 355 (480)
Q Consensus 276 ~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~ 355 (480)
+.++|.+..++..++|++++||+||..++. +.++..||++.|+
T Consensus 219 --------l~~~~~~i~~l~~~gi~v~~cP~Sn~~l~~-----------------------------~~~~~~~pi~~l~ 261 (324)
T TIGR01430 219 --------ALEDPELLKRLAQENITLEVCPTSNVALGV-----------------------------VKSLAEHPLRRFL 261 (324)
T ss_pred --------hccCHHHHHHHHHcCceEEECCcccccccc-----------------------------cCCcccChHHHHH
Confidence 667788888999999999999999998753 2356789999999
Q ss_pred HCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhcc
Q psy8141 356 ARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGP 420 (480)
Q Consensus 356 ~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~ 420 (480)
+.|++|+||||||..+++ +|.+||..|.+.++++..||..+++||+.+||.++++|++++..
T Consensus 262 ~~Gv~v~igTD~~~~~~~---~l~~e~~~a~~~~~l~~~el~~~~~na~~~~f~~~~~k~~l~~~ 323 (324)
T TIGR01430 262 EAGVKVTLNSDDPAYFGS---YLTEEYEIAAKHAGLTEEELKQLARNALEGSFLSDDEKKELLAK 323 (324)
T ss_pred HCCCEEEECCCCCcccCC---CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhh
Confidence 999999999999999877 59999999999999999999999999999999999999999864
No 17
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=100.00 E-value=8.3e-33 Score=281.12 Aligned_cols=291 Identities=25% Similarity=0.262 Sum_probs=220.4
Q ss_pred CCCccccccccCCc----cccchhhhcCCCCCCCC------------cccccccc--------ccCCHHHHHHHHHHHHH
Q psy8141 6 SLPHSTKIVHEDKK----TIADTDKHFKPSDNDSS------------TDQVAPLW--------QYKTISDLSNQKSEVAA 61 (480)
Q Consensus 6 ~lp~~~l~~h~~~~----~~~~~~~f~~~~~~~~~------------~~~l~~~f--------~l~t~~~la~l~~~vi~ 61 (480)
.|||++||+|++|+ |+.++.+..+....... ...+.++| .+.+++++++.++.++.
T Consensus 1 ~lpK~elH~Hl~Gs~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ed~~~~~~~~~~ 80 (325)
T cd01320 1 NLPKAELHLHLDGSLRPETILELAKKNGITLPASDVELLELVVAAYNFSDLQDFLAKYDFGLSVLQTEEDFERLAYEYLE 80 (325)
T ss_pred CCCceEEeecccCCCCHHHHHHHHHHhCCCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 48999999999974 45545443221111000 00011111 23688899999999999
Q ss_pred HHHHCCceEEEEEEeccCCCh-----hh-HHHHHHHHH-HcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhh
Q psy8141 62 DLEESKYQNAELRLSIYGKSE-----DE-WDKLATWAI-ESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKP 134 (480)
Q Consensus 62 ~l~~~~v~y~Elr~s~~~~~~-----~e-~~~la~w~~-~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~p 134 (480)
++.++|+.|+|+|++|+.... .+ .+.+.+.+. ..+.+++.+++++.+.|..+.... .+.++.+
T Consensus 81 e~~~~Gvt~~E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~~~gi~~~l~~~~~~~~~~~~~-------~~~~~~~--- 150 (325)
T cd01320 81 DAAADGVVYAEIRFSPQLHTRRGLSFDEVVEAVLRGLDEAEAEFGIKARLILCGLRHLSPESA-------QETLELA--- 150 (325)
T ss_pred HHHHcCCEEEEEEeCchhhccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEecCCCCHHHH-------HHHHHHH---
Confidence 999999999999999864322 22 222233322 234568888999888887765322 2223322
Q ss_pred hHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCC
Q psy8141 135 LFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLN 214 (480)
Q Consensus 135 L~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~ 214 (480)
.......|+|+|++++|.. .++..|-..+..| ++.|++
T Consensus 151 -------------~~~~~~~vvg~~l~~~~~~--------------------~~~~~~~~~~~~A---------~~~g~~ 188 (325)
T cd01320 151 -------------LKYRDKGVVGFDLAGDEVG--------------------FPPEKFVRAFQRA---------REAGLR 188 (325)
T ss_pred -------------HhccCCCEEEeecCCCCCC--------------------CCHHHHHHHHHHH---------HHCCCc
Confidence 1112235999999998863 3667788888888 889987
Q ss_pred CCCcccccCCCCChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHH
Q psy8141 215 TFVLRPHCGEAGPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQY 292 (480)
Q Consensus 215 ~~~l~~HaGE~~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~y 292 (480)
+ +.||||.+.++++.+++ ++++||+||+. +.++|....
T Consensus 189 v---~~H~~E~~~~~~~~~a~~~~g~~~i~H~~~-------------------------------------l~~~~~~~~ 228 (325)
T cd01320 189 L---TAHAGEAGGPESVRDALDLLGAERIGHGIR-------------------------------------AIEDPELVK 228 (325)
T ss_pred e---EEeCCCCCCHHHHHHHHHHcCCcccchhhc-------------------------------------cCccHHHHH
Confidence 6 99999998888888888 89999999999 556787888
Q ss_pred HHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcC
Q psy8141 293 LYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFH 372 (480)
Q Consensus 293 l~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~ 372 (480)
++..++|++++||+||..++. ...+..||++.|++.|++|+|+||||..++
T Consensus 229 ~l~~~gi~v~~~P~sn~~l~~-----------------------------~~~~~~~p~~~l~~~Gv~v~lgTD~~~~~~ 279 (325)
T cd01320 229 RLAERNIPLEVCPTSNVQTGA-----------------------------VKSLAEHPLRELLDAGVKVTINTDDPTVFG 279 (325)
T ss_pred HHHHcCCeEEECCCccccccc-----------------------------cCCcccChHHHHHHCCCEEEECCCCCcccC
Confidence 888899999999999998754 234678999999999999999999998887
Q ss_pred CCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhcc
Q psy8141 373 FTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGP 420 (480)
Q Consensus 373 ~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~ 420 (480)
+ ++.+||..+++.++|+..||.++++||+.+||.++++|++++..
T Consensus 280 ~---~~~~e~~~~~~~~~l~~~el~~~~~na~~~~f~~~~~k~~~~~~ 324 (325)
T cd01320 280 T---YLTDEYELLAEAFGLTEEELKKLARNAVEASFLSEEEKAELLKR 324 (325)
T ss_pred C---CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhh
Confidence 5 69999999999999999999999999999999999999998753
No 18
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.42 E-value=1.7e-11 Score=126.89 Aligned_cols=243 Identities=13% Similarity=-0.009 Sum_probs=159.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEEEEEEeccCCChhhHHHHHHHHHHc-ccccceeeeecccccccChhhhHHHHhhHHH
Q psy8141 48 TISDLSNQKSEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIES-NVYSNNIRWLIQIPRLYDIFKSNKLINNFQE 126 (480)
Q Consensus 48 t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~~~~e~~~la~w~~~~-~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~ 126 (480)
++++++..++..+.++.++|+.++|++.. ++...++...+.+.+.+. ..++..+.++....+.++.... +. ..+
T Consensus 89 ~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~-~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~---~~~ 163 (377)
T TIGR01224 89 SEEELLKLALFRLKSMLRSGTTTAEVKSG-YGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQ-GR---PDD 163 (377)
T ss_pred CHHHHHHHHHHHHHHHHHCCceEEEeccc-CCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCcccc-CC---HHH
Confidence 77899999999999999999999988743 343333322233333222 2244555554332223332100 00 011
Q ss_pred HHHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhH
Q psy8141 127 ILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNH 206 (480)
Q Consensus 127 ~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~ 206 (480)
+++...+-+.+ +. .....|.|+|+.+.+.. .++..+...+..|
T Consensus 164 ~~~~~~~~~~~---------~~-~~~~~v~~~~~~~~~~~--------------------~~~~~~~~~~~~A------- 206 (377)
T TIGR01224 164 YVDGICEELIP---------QV-AEEGLASFADVFCEAGV--------------------FSVEQSRRILQAA------- 206 (377)
T ss_pred HHHHHHHHHHH---------HH-HHhCCCCeeEEEecCCC--------------------cCHHHHHHHHHHH-------
Confidence 11111110100 00 01124889999887762 3667788888888
Q ss_pred HHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhcccccccc
Q psy8141 207 FRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLR 285 (480)
Q Consensus 207 ~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~ 285 (480)
++.|++. +.||+|......+..+. ++..+|+||+. +
T Consensus 207 --~~~g~~v---~~H~~e~~~~~~~~~~~~~g~~~~~H~~~-------------------------------------~- 243 (377)
T TIGR01224 207 --QEAGLPV---KLHAEELSNLGGAELAAKLGAVSADHLEH-------------------------------------A- 243 (377)
T ss_pred --HHCCCCE---EEEecCCCCCCHHHHHHHcCCCccHHHhc-------------------------------------C-
Confidence 8888765 99999976555555444 78889999988 2
Q ss_pred CChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcC
Q psy8141 286 KAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLST 365 (480)
Q Consensus 286 ~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsT 365 (480)
++....++...++.+++||.||..++. ..+|+++|.+.|++|+++|
T Consensus 244 -~~~~l~~la~~g~~~~~~P~~~~~l~~---------------------------------~~~p~~~l~~~Gv~v~lgT 289 (377)
T TIGR01224 244 -SDAGIKALAEAGTVAVLLPGTTFYLRE---------------------------------TYPPARQLIDYGVPVALAT 289 (377)
T ss_pred -CHHHHHHHHhcCCEEEECchHHHhcCC---------------------------------cCccHHHHHHCCCCEEEEC
Confidence 455556677899999999999987632 3479999999999999999
Q ss_pred CC-ccCcCCCCcChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCCh
Q psy8141 366 DD-PLQFHFTKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMSGFPH 411 (480)
Q Consensus 366 DD-Pl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~e-LarNSv~~S~~~~ 411 (480)
|. |..... ..+.+++..+....+++..++.+ .+.|+....+.++
T Consensus 290 D~~~~~~~~--~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~ 335 (377)
T TIGR01224 290 DLNPGSSPT--LSMQLIMSLACRLMKMTPEEALHAATVNAAYALGLGE 335 (377)
T ss_pred CCCCCCChh--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 95 422221 24777777777778999999877 6689999888764
No 19
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.33 E-value=1.1e-10 Score=120.43 Aligned_cols=242 Identities=12% Similarity=-0.002 Sum_probs=156.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEEEEEEeccCCChhhHHHHHHHHHHcccccceeeeecccc-cccChhhhHHHHhhHHH
Q psy8141 48 TISDLSNQKSEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIP-RLYDIFKSNKLINNFQE 126 (480)
Q Consensus 48 t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~~~~e~~~la~w~~~~~~~~~~irwiv~i~-R~~~~~~~~~~v~~f~~ 126 (480)
+++++.+.+++.+.++.+.|+.|+|.+.. ++.+.+.-....+.+.+-+.- ..+.+..++. |...+......-...+.
T Consensus 86 ~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~-~~~~~~~~~~~~~a~~~~~~~-~~~~l~~~~~~~~~~p~~~~~~~~~~~~ 163 (371)
T cd01296 86 SEDELFASALRRLARMLRHGTTTVEVKSG-YGLDLETELKMLRVIRRLKEE-GPVDLVSTFLGAHAVPPEYKGREEYIDL 163 (371)
T ss_pred CHHHHHHHHHHHHHHHHHCCceEEEeccc-CCCCHHHHHHHHHHHHHHHhh-CCCceEeeeeecccCCcccCChHHHHHH
Confidence 67889999999999999999999998632 222222211122222211110 1223333333 33322100000000000
Q ss_pred HHHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhH
Q psy8141 127 ILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNH 206 (480)
Q Consensus 127 ~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~ 206 (480)
..+.. ... . .....+.|+|+.+.+.. .++..+...+..|
T Consensus 164 ~~~~~----~~~---------~-~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~A------- 202 (371)
T cd01296 164 VIEEV----LPA---------V-AEENLADFCDVFCEKGA--------------------FSLEQSRRILEAA------- 202 (371)
T ss_pred HHHHH----HHH---------H-HHhCCCCEEEEeecCCc--------------------cCHHHHHHHHHHH-------
Confidence 01111 000 0 01245888999876652 3466777888888
Q ss_pred HHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhcccccccc
Q psy8141 207 FRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLR 285 (480)
Q Consensus 207 ~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~ 285 (480)
+++|+.. ..||+|.+....+..+. ++..+|+||..+
T Consensus 203 --~~~g~~v---~~H~~e~~~~~~~~~~~~~g~~~i~H~~~~-------------------------------------- 239 (371)
T cd01296 203 --KEAGLPV---KIHADELSNIGGAELAAELGALSADHLEHT-------------------------------------- 239 (371)
T ss_pred --HHCCCeE---EEEEcCcCCCCHHHHHHHcCCCeeHHhcCC--------------------------------------
Confidence 8899876 99999987665555555 788999999982
Q ss_pred CChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcC
Q psy8141 286 KAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLST 365 (480)
Q Consensus 286 ~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsT 365 (480)
++....++...++.+++||.||..++. ..+|++.|++.|++|+++|
T Consensus 240 -~~~~i~~la~~g~~v~~~P~~~~~l~~---------------------------------~~~~~~~l~~~Gv~v~lgs 285 (371)
T cd01296 240 -SDEGIAALAEAGTVAVLLPGTAFSLRE---------------------------------TYPPARKLIDAGVPVALGT 285 (371)
T ss_pred -CHHHHHHHHHcCCeEEEChHHHHHhCC---------------------------------CCCCHHHHHHCCCcEEEec
Confidence 355666777899999999999987532 1479999999999999999
Q ss_pred CC-ccCcCCCCcChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCCh
Q psy8141 366 DD-PLQFHFTKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMSGFPH 411 (480)
Q Consensus 366 DD-Pl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~e-LarNSv~~S~~~~ 411 (480)
|. |..+.. ..+.+++..+.+..+++..++.+ .+.|+....+.++
T Consensus 286 D~~p~~~~~--~~l~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~ 331 (371)
T cd01296 286 DFNPGSSPT--SSMPLVMHLACRLMRMTPEEALTAATINAAAALGLGE 331 (371)
T ss_pred CCCCCCChH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 95 654332 23778888888889999999875 4689999888764
No 20
>PRK09230 cytosine deaminase; Provisional
Probab=99.11 E-value=3.9e-09 Score=112.21 Aligned_cols=251 Identities=14% Similarity=0.110 Sum_probs=146.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHCCceEEEEEEeccCCChhhHHHHHHHHHHcc-cccceeeeecccccc--cChhhhHHHHh
Q psy8141 46 YKTISDLSNQKSEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESN-VYSNNIRWLIQIPRL--YDIFKSNKLIN 122 (480)
Q Consensus 46 l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~~~~e~~~la~w~~~~~-~~~~~irwiv~i~R~--~~~~~~~~~v~ 122 (480)
..|+++++..+...+.++.++|+.++|.+++++......|+.+.+...+++ .....++-. ++. ++...
T Consensus 94 ~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i~a~---~~~~~~~~~~------ 164 (426)
T PRK09230 94 LLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIVAF---PQEGILSYPN------ 164 (426)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEEEec---cCccccCCcc------
Confidence 358899999999999999999999999999875443334655544443332 344444433 332 22111
Q ss_pred hHHHHHHHHhhhhHhhhcCCCCChhhhccc-CceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhh
Q psy8141 123 NFQEILQNIFKPLFEVTNDSSSHPHLHKFL-QYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANL 201 (480)
Q Consensus 123 ~f~~~L~~if~pL~~a~~~p~~~~~l~~fl-~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl 201 (480)
.++.++.+ + ++. ..++|++....+. +.++..+...+..|
T Consensus 165 -~~~~l~~a----------------~-~~~~~~vg~~p~~~~~~--------------------~~~~e~l~~~~~~A-- 204 (426)
T PRK09230 165 -GEALLEEA----------------L-RLGADVVGAIPHFEFTR--------------------EYGVESLHKAFALA-- 204 (426)
T ss_pred -HHHHHHHH----------------H-HcCCCEEeCCCCccccc--------------------hhHHHHHHHHHHHH--
Confidence 12222221 1 121 2233333222221 34677889999999
Q ss_pred hhhhHHHHHCCCCCCCcccccCCCCChhh--HHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhh
Q psy8141 202 TVLNHFRRARDLNTFVLRPHCGEAGPIQH--LVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAEN 277 (480)
Q Consensus 202 ~~LN~~r~~~gl~~~~l~~HaGE~~~~~~--l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~ 277 (480)
+++|++. ..|++|..++.. ....+ +...+++|.+.+
T Consensus 205 -------~~~g~~~---~~H~~E~~~~~~~~~~~~~~~~~~~gl~~~v~~------------------------------ 244 (426)
T PRK09230 205 -------QKYDRLI---DVHCDEIDDEQSRFVETVAALAHREGMGARVTA------------------------------ 244 (426)
T ss_pred -------HHhCCCc---EEEECCCCCcchHHHHHHHHHHHHhCCCCCEEE------------------------------
Confidence 8899776 999999876533 22222 333445443331
Q ss_pred cccccccc-----CChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchH
Q psy8141 278 ISHGLLLR-----KAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLP 352 (480)
Q Consensus 278 ~~~~~~l~-----~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~ 352 (480)
+|...+. +++....++..++++++.||.||..|+.... ..|. ...--|++
T Consensus 245 -~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~~~~-----------------~~p~-------~~g~~pi~ 299 (426)
T PRK09230 245 -SHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFD-----------------TYPK-------RRGITRVK 299 (426)
T ss_pred -EecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCCC-----------------CCCC-------CCCCcCHH
Confidence 1111121 2456777788899999999999998752100 0000 01123699
Q ss_pred HHHHCCCcEEEcCCCcc-CcCC-CCcChHHHHHHHHHHc-CCC---HHHHHH-HHHHHHHHcCCC
Q psy8141 353 EYLARGLVVSLSTDDPL-QFHF-TKEPLMEEYSIAAQVW-KLS---SCDMCE-LARNSVLMSGFP 410 (480)
Q Consensus 353 ~l~~~Gl~VsLsTDDPl-~f~~-T~epL~eEY~~aa~~~-~Ls---~~Dl~e-LarNSv~~S~~~ 410 (480)
+|.+.|++|+|+||++. .|.. ..-.+.++...++... .++ ..++.+ ...|+.++-+.+
T Consensus 300 ~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~maT~~gA~alg~~ 364 (426)
T PRK09230 300 EMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITTHSARTLNLQ 364 (426)
T ss_pred HHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHhhCChhhHHHHHHHHhcchhHHhCCC
Confidence 99999999999999987 2321 1135777777654332 222 334444 345777777654
No 21
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.05 E-value=5.7e-08 Score=93.25 Aligned_cols=236 Identities=19% Similarity=0.091 Sum_probs=153.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHCCceEEEEEEeccCCCh--hhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhh
Q psy8141 46 YKTISDLSNQKSEVAADLEESKYQNAELRLSIYGKSE--DEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINN 123 (480)
Q Consensus 46 l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~~~--~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~ 123 (480)
..+.+++++.....+.++.+.|+..+.....+..... ..++.+.+++.... +.++.+...+.+..... .....
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~-- 101 (275)
T cd01292 27 ELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASA--GIRVVLGLGIPGVPAAV-DEDAE-- 101 (275)
T ss_pred ccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHHHHHHHHhc--CeeeEEeccCCCCcccc-chhHH--
Confidence 5688889999999999999999999998876544322 22344444443322 45555555544433221 01111
Q ss_pred HHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhh
Q psy8141 124 FQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTV 203 (480)
Q Consensus 124 f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~ 203 (480)
++.++.+ .. ... ..++|+++.+.+... ..++..+...+..|
T Consensus 102 -~~~~~~i----~~----------~~~--~~~~gi~~~~~~~~~------------------~~~~~~~~~~~~~a---- 142 (275)
T cd01292 102 -ALLLELL----RR----------GLE--LGAVGLKLAGPYTAT------------------GLSDESLRRVLEEA---- 142 (275)
T ss_pred -HHHHHHH----HH----------HHh--cCCeeEeeCCCCCCC------------------CCCcHHHHHHHHHH----
Confidence 1111111 00 111 368999988776531 12566788888888
Q ss_pred hhHHHHHCCCCCCCcccccCCCCC----hhhHHHHhh--cccccccccccccccchhhhhhhhcccchhhhhhhchhhhh
Q psy8141 204 LNHFRRARDLNTFVLRPHCGEAGP----IQHLVCGFM--MAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAEN 277 (480)
Q Consensus 204 LN~~r~~~gl~~~~l~~HaGE~~~----~~~l~~a~l--~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~ 277 (480)
++.|+.. ..|+++... ...+.+... ....|.|+..
T Consensus 143 -----~~~~~~i---~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~------------------------------- 183 (275)
T cd01292 143 -----RKLGLPV---VIHAGELPDPTRALEDLVALLRLGGRVVIGHVSH------------------------------- 183 (275)
T ss_pred -----HHcCCeE---EEeeCCcccCccCHHHHHHHHhcCCCEEEECCcc-------------------------------
Confidence 7787654 999998764 344444432 4566777776
Q ss_pred ccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHC
Q psy8141 278 ISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLAR 357 (480)
Q Consensus 278 ~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~ 357 (480)
. ++.........++.+++||.+|..++. ......|+..+++.
T Consensus 184 ------~--~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~ 225 (275)
T cd01292 184 ------L--DPELLELLKEAGVSLEVCPLSNYLLGR------------------------------DGEGAEALRRLLEL 225 (275)
T ss_pred ------C--CHHHHHHHHHcCCeEEECCcccccccC------------------------------CcCCcccHHHHHHC
Confidence 2 455666677789999999999875410 11345799999999
Q ss_pred CCcEEEcCCCccCcCCCCcChHHHHHHHHHHcC--CCHHHHHHH-HHHHH
Q psy8141 358 GLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK--LSSCDMCEL-ARNSV 404 (480)
Q Consensus 358 Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~--Ls~~Dl~eL-arNSv 404 (480)
|.+++++||.|..... ..+.+++..+.+..+ ++..++.++ +.|+.
T Consensus 226 g~~~~lgTD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~t~n~a 273 (275)
T cd01292 226 GIRVTLGTDGPPHPLG--TDLLALLRLLLKVLRLGLSLEEALRLATINPA 273 (275)
T ss_pred CCcEEEecCCCCCCCC--CCHHHHHHHHHHHHhcCCCHHHHHHHHhcccc
Confidence 9999999999987322 258899998887755 588888876 55654
No 22
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=98.83 E-value=3.1e-08 Score=98.12 Aligned_cols=122 Identities=20% Similarity=0.195 Sum_probs=93.4
Q ss_pred HHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCC---hhhHHHHh-hcccccccccccccccchhhhhhhhcccchhh
Q psy8141 192 YYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGP---IQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQH 267 (480)
Q Consensus 192 f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~---~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~ 267 (480)
+...+..| +++|+.. +.||+|... ...+..+. +++++|.|++.+
T Consensus 127 l~~~~~~A---------~~~g~~v---~~H~~e~~~~~g~~~i~~~~~~~~~~i~H~~~l-------------------- 174 (263)
T cd01305 127 LEDILELL---------RRRGKLF---AIHASETRESVGMTDIERALDLEPDLLVHGTHL-------------------- 174 (263)
T ss_pred HHHHHHHH---------HHCCCee---EEecCCCCCCCCchhHHHHHhCCCCEEEEcCCC--------------------
Confidence 67777777 8898776 999999864 22333334 588999999983
Q ss_pred hhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCccccccc
Q psy8141 268 LVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYH 347 (480)
Q Consensus 268 ~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~ 347 (480)
++....++..+++.++.||.||..++. .
T Consensus 175 -------------------~~~~~~~la~~g~~v~~~P~sn~~l~~---------------------------------g 202 (263)
T cd01305 175 -------------------TDEDLELVRENGVPVVLCPRSNLYFGV---------------------------------G 202 (263)
T ss_pred -------------------CHHHHHHHHHcCCcEEEChhhHHHhCC---------------------------------C
Confidence 233455777899999999999987643 2
Q ss_pred CCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCC----CHHHHHHHH
Q psy8141 348 RNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKL----SSCDMCELA 400 (480)
Q Consensus 348 ~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~L----s~~Dl~eLa 400 (480)
..|+++|.+.|++|+++||++..... .+.+|+..++...++ +..++.+++
T Consensus 203 ~~p~~~l~~~Gv~v~lGtD~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~a 256 (263)
T cd01305 203 IPPVAELLKLGIKVLLGTDNVMVNEP---DMWAEMEFLAKYSRLQGYLSPLEILRMA 256 (263)
T ss_pred CCCHHHHHHCCCcEEEECCCCccCCC---CHHHHHHHHHHHhcccccCCHHHHHHHH
Confidence 37999999999999999999875443 599999999988776 666655443
No 23
>PRK07213 chlorohydrolase; Provisional
Probab=98.70 E-value=1.7e-07 Score=97.97 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=101.3
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCCh----------hhHHHHh-hcc--cccccccccccccchh
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPI----------QHLVCGF-MMA--ENISHGLLLRKAPVLQ 254 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~----------~~l~~a~-l~a--~RIgHG~~l~~~~~~~ 254 (480)
++..+-..+..| +++|+.. +.|++|.... ..+..+. +|. +.|.||+.+.
T Consensus 177 s~~~l~~~~~~A---------~~~g~~v---~~H~~e~~~e~~~~~~~~G~~~v~~~~~~G~~~~~i~H~~~~~------ 238 (375)
T PRK07213 177 SDEELKFICKEC---------KREKKIF---SIHAAEHKGSVEYSLEKYGMTEIERLINLGFKPDFIVHATHPS------ 238 (375)
T ss_pred CHHHHHHHHHHH---------HHcCCEE---EEeeCCchhHHHHHHHHcCCChHHHHHhcCCCCCEEEECCCCC------
Confidence 566777888888 8888766 9999997532 1122232 333 3788888732
Q ss_pred hhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhccc
Q psy8141 255 YLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAM 334 (480)
Q Consensus 255 ~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~ 334 (480)
+.. ..++..+++.++.||+||..++.
T Consensus 239 --------------------------------~~~-i~~la~~g~~v~~~P~sn~~l~~--------------------- 264 (375)
T PRK07213 239 --------------------------------NDD-LELLKENNIPVVVCPRANASFNV--------------------- 264 (375)
T ss_pred --------------------------------HHH-HHHHHHcCCcEEECCcchhhhcc---------------------
Confidence 123 33567789999999999988643
Q ss_pred CCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCC
Q psy8141 335 SPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFP 410 (480)
Q Consensus 335 ~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLa-rNSv~~S~~~ 410 (480)
.-.|+++|.+.|++|+|+||++...+. .+.+|+..+++.++++..++.++| .|+.+.-+.+
T Consensus 265 ------------g~~~v~~l~~~Gv~v~lGTD~~~~~~~---~~~~e~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~ 326 (375)
T PRK07213 265 ------------GLPPLNEMLEKGILLGIGTDNFMANSP---SIFREMEFIYKLYHIEPKEILKMATINGAKILGLI 326 (375)
T ss_pred ------------CCccHHHHHHCCCEEEEeeCCCCCchH---hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCCC
Confidence 237999999999999999999764333 588999999888899999987765 7888887763
No 24
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=98.58 E-value=9.7e-06 Score=84.30 Aligned_cols=137 Identities=22% Similarity=0.200 Sum_probs=94.0
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhh-HHHHh-------------hccc-ccccccccccccc
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQH-LVCGF-------------MMAE-NISHGLLLRKAPV 252 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~-l~~a~-------------l~a~-RIgHG~~l~~~~~ 252 (480)
++..+...+..| +++|+.. ..||+|...... +...+ ++++ +|.||..+
T Consensus 192 ~~~~l~~~~~~A---------~~~g~~v---~~H~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~l----- 254 (411)
T cd01298 192 SDELLREVAELA---------REYGVPL---HIHLAETEDEVEESLEKYGKRPVEYLEELGLLGPDVVLAHCVWL----- 254 (411)
T ss_pred CHHHHHHHHHHH---------HHcCCcE---EEEecCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEecCC-----
Confidence 567788888888 8889776 999988753211 11110 1122 56777762
Q ss_pred hhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhc
Q psy8141 253 LQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRI 332 (480)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~ 332 (480)
++....++...+|.+++||.+|..++.
T Consensus 255 ----------------------------------~~~~~~~l~~~gi~~~~~p~~~~~~~~------------------- 281 (411)
T cd01298 255 ----------------------------------TDEEIELLAETGTGVAHNPASNMKLAS------------------- 281 (411)
T ss_pred ----------------------------------CHHHHHHHHHcCCeEEEChHHhhhhhh-------------------
Confidence 334445667789999999999876532
Q ss_pred ccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHH--------cCCCHHHHHHHH-HHH
Q psy8141 333 AMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV--------WKLSSCDMCELA-RNS 403 (480)
Q Consensus 333 ~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~--------~~Ls~~Dl~eLa-rNS 403 (480)
...|++.+++.|++++++||.|..... -++.+|+..+... .+++..++.+++ .|+
T Consensus 282 --------------~~~~~~~~~~~Gv~~~~GsD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~ 345 (411)
T cd01298 282 --------------GIAPVPEMLEAGVNVGLGTDGAASNNN--LDMFEEMRLAALLQKLAHGDPTALPAEEALEMATIGG 345 (411)
T ss_pred --------------CCCCHHHHHHCCCcEEEeCCCCccCCC--cCHHHHHHHHHHHhccccCCCCcCCHHHHHHHHHhhH
Confidence 136999999999999999999864432 1466777765443 258888877766 588
Q ss_pred HHHcCCC
Q psy8141 404 VLMSGFP 410 (480)
Q Consensus 404 v~~S~~~ 410 (480)
....+.+
T Consensus 346 A~~lg~~ 352 (411)
T cd01298 346 AKALGLD 352 (411)
T ss_pred HHHhCCc
Confidence 8887765
No 25
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=98.56 E-value=9.3e-06 Score=86.18 Aligned_cols=137 Identities=20% Similarity=0.147 Sum_probs=91.5
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCCh------------hhHHHHh--hcccc-cccccccccccc
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPI------------QHLVCGF--MMAEN-ISHGLLLRKAPV 252 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~------------~~l~~a~--l~a~R-IgHG~~l~~~~~ 252 (480)
++...-..+..| ++.|+.. +.|++|.... -...... ++++. ++||+.+
T Consensus 187 s~~~l~~~~~~A---------~~~g~~v---~~H~~e~~~~~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~l----- 249 (424)
T PRK08393 187 SLALLKWVREKA---------REWNKLI---TIHLSETMDEIKQIREKYGKSPVVLLDEIGFLNEDVIAAHGVWL----- 249 (424)
T ss_pred CHHHHHHHHHHH---------HHcCCcE---EEEeCCCHHHHHHHHHHhCcCHHHHHHHcCCCCCCcEEEEeecC-----
Confidence 455666777777 8888765 9999997521 1111222 44443 6888872
Q ss_pred hhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhc
Q psy8141 253 LQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRI 332 (480)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~ 332 (480)
++....++..+++.+..||.||..++.
T Consensus 250 ----------------------------------~~~~l~~la~~g~~v~~~P~sn~~lg~------------------- 276 (424)
T PRK08393 250 ----------------------------------SSRDIRILASAGVTVAHNPASNMKLGS------------------- 276 (424)
T ss_pred ----------------------------------CHHHHHHHHhcCCEEEECHHHHHhhcc-------------------
Confidence 344455777899999999999987643
Q ss_pred ccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHH---cCC-----CHHH-HHHHHHHH
Q psy8141 333 AMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV---WKL-----SSCD-MCELARNS 403 (480)
Q Consensus 333 ~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~---~~L-----s~~D-l~eLarNS 403 (480)
...|+++|.++|++|+|+||++.-+.. -.+.+|...++.. ..+ +..+ +.-.+.|+
T Consensus 277 --------------g~~~~~~~~~~Gv~v~lGtD~~~~~~~--~d~~~~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~~ 340 (424)
T PRK08393 277 --------------GVMPLRKLLNAGVNVALGTDGAASNNN--LDMLREMKLAALLHKVHNLDPTIADAETVFRMATQNG 340 (424)
T ss_pred --------------CCCCHHHHHHCCCcEEEecCCCccCCc--hhHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHH
Confidence 236999999999999999999853322 1488888866422 222 3344 44556788
Q ss_pred HHHcCCC
Q psy8141 404 VLMSGFP 410 (480)
Q Consensus 404 v~~S~~~ 410 (480)
.+..+.+
T Consensus 341 A~~lg~~ 347 (424)
T PRK08393 341 AKALGLK 347 (424)
T ss_pred HHHhCCC
Confidence 7777653
No 26
>PRK09356 imidazolonepropionase; Validated
Probab=98.51 E-value=1.9e-05 Score=82.77 Aligned_cols=140 Identities=16% Similarity=0.021 Sum_probs=98.9
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccch
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTI 265 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~ 265 (480)
.++......+..| ++.|+.. ..||.|......+..+. ++..++.|+..+
T Consensus 219 ~~~~~l~~~~~~A---------~~~g~~v---~~H~~~~~~~~~~~~~~~~~~~~~~H~~~~------------------ 268 (406)
T PRK09356 219 FSVEQSERVLEAA---------KALGLPV---KIHAEQLSNLGGAELAAEYGALSADHLEYL------------------ 268 (406)
T ss_pred CCHHHHHHHHHHH---------HHCCCCE---EEEEecccCCCHHHHHHHcCCcEehHhhcC------------------
Confidence 3567777788888 8888765 99999865443333333 677788898872
Q ss_pred hhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCccccc
Q psy8141 266 QHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLN 345 (480)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 345 (480)
++....++...++.+++||.+|..++.
T Consensus 269 ---------------------~~~~~~~la~~g~~~~~~P~~~~~l~~-------------------------------- 295 (406)
T PRK09356 269 ---------------------DEAGIAAMAEAGTVAVLLPGAFYFLRE-------------------------------- 295 (406)
T ss_pred ---------------------CHHHHHHHHHhCCEEEECccchhhcCc--------------------------------
Confidence 344445666789999999999976531
Q ss_pred ccCCchHHHHHCCCcEEEcCCCcc-CcCCCCcChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCCh
Q psy8141 346 YHRNPLPEYLARGLVVSLSTDDPL-QFHFTKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMSGFPH 411 (480)
Q Consensus 346 y~~hP~~~l~~~Gl~VsLsTDDPl-~f~~T~epL~eEY~~aa~~~~Ls~~Dl~e-LarNSv~~S~~~~ 411 (480)
....|+.+|++.|++|+++||.+. .... ..+..++..+....+++..++.+ .+.|+.+..+.++
T Consensus 296 ~~~~~~~~l~~~Gi~v~lgtD~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~ 361 (406)
T PRK09356 296 TQYPPARLLRDAGVPVALATDFNPGSSPT--ESLLLAMNMACTLFRLTPEEALAAVTINAARALGRQD 361 (406)
T ss_pred ccCchHHHHHHCCCeEEEeCCCCCCCChh--HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 224799999999999999999742 1111 13555555555667999999644 4579999888754
No 27
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=98.48 E-value=1.6e-05 Score=82.25 Aligned_cols=251 Identities=16% Similarity=0.106 Sum_probs=138.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHCCceEEEEEEeccCC-ChhhHHHHHHHHHHccccccee-eeecccccccChhhhHHHHhh
Q psy8141 46 YKTISDLSNQKSEVAADLEESKYQNAELRLSIYGK-SEDEWDKLATWAIESNVYSNNI-RWLIQIPRLYDIFKSNKLINN 123 (480)
Q Consensus 46 l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~-~~~e~~~la~w~~~~~~~~~~i-rwiv~i~R~~~~~~~~~~v~~ 123 (480)
..++++++..+...+.++.+.|+.+++..+.++.. ....++.+.++..+.+. .+ .....+++.... .. ..
T Consensus 88 ~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~----~~ 159 (398)
T cd01293 88 LLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWAD---LIDLQIVAFPQHGLL-ST----PG 159 (398)
T ss_pred ccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhc---cceEEEEeccCcccc-CC----CC
Confidence 35888999999999999999999999876665432 22235555554333221 11 112233332100 00 11
Q ss_pred HHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhh
Q psy8141 124 FQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTV 203 (480)
Q Consensus 124 f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~ 203 (480)
..++++... ..-...+.|++..... ..++..+......|
T Consensus 160 ~~~~v~~~~----------------~~g~~~~~~~~~~~~~---------------------~~s~e~l~~~~~~A---- 198 (398)
T cd01293 160 GEELMREAL----------------KMGADVVGGIPPAEID---------------------EDGEESLDTLFELA---- 198 (398)
T ss_pred HHHHHHHHH----------------HhCCCEEeCCCCCcCC---------------------ccHHHHHHHHHHHH----
Confidence 122222210 0101112223322110 23566777888888
Q ss_pred hhHHHHHCCCCCCCcccccCCCCCh--hhHHHHh-----hc---ccccccccccccccchhhhhhhhcccchhhhhhhch
Q psy8141 204 LNHFRRARDLNTFVLRPHCGEAGPI--QHLVCGF-----MM---AENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFM 273 (480)
Q Consensus 204 LN~~r~~~gl~~~~l~~HaGE~~~~--~~l~~a~-----l~---a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l 273 (480)
+++|+.. +.|++|.... ..+..++ .+ ...|.||..+....
T Consensus 199 -----~~~g~~v---~~H~~e~~~~~~~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~---------------------- 248 (398)
T cd01293 199 -----QEHGLDI---DLHLDETDDPGSRTLEELAEEAERRGMQGRVTCSHATALGSLP---------------------- 248 (398)
T ss_pred -----HHhCCCC---EEEeCCCCCcchhHHHHHHHHHHHhCCCCCEEeeecchhhcCC----------------------
Confidence 8888765 9999987642 2222222 12 23567877631100
Q ss_pred hhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHH
Q psy8141 274 MAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPE 353 (480)
Q Consensus 274 ~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~ 353 (480)
-.+.+.+..++..++++++.||.||..+... ... .-......|++.
T Consensus 249 ----------~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~----------~~~--------------~~~~~~~~~~~~ 294 (398)
T cd01293 249 ----------EAEVSRLADLLAEAGISVVSLPPINLYLQGR----------EDT--------------TPKRRGVTPVKE 294 (398)
T ss_pred ----------HHHHHHHHHHHHHcCCeEEeCCCcchhhccc----------ccC--------------CCCCCCCCcHHH
Confidence 0011245567788999999999999876311 000 000123479999
Q ss_pred HHHCCCcEEEcCCCcc--CcCCCCcChHHHHHHHHHHcCCCH----HHHHHHH-HHHHHHcCC
Q psy8141 354 YLARGLVVSLSTDDPL--QFHFTKEPLMEEYSIAAQVWKLSS----CDMCELA-RNSVLMSGF 409 (480)
Q Consensus 354 l~~~Gl~VsLsTDDPl--~f~~T~epL~eEY~~aa~~~~Ls~----~Dl~eLa-rNSv~~S~~ 409 (480)
|.+.|++|+++||.+. ........+.++...++...+++. .+..++| .|+....+.
T Consensus 295 ~~~~Gv~v~lGTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~ 357 (398)
T cd01293 295 LRAAGVNVALGSDNVRDPWYPFGSGDMLEVANLAAHIAQLGTPEDLALALDLITGNAARALGL 357 (398)
T ss_pred HHHCCCeEEECCCCCCCCCcCCCCCCHHHHHHHHHHHHcCCChhhHHHHHHhcChhhhhhcCC
Confidence 9999999999999843 111111247888888887778744 2343333 566666654
No 28
>PRK06886 hypothetical protein; Validated
Probab=98.47 E-value=2.1e-05 Score=81.39 Aligned_cols=283 Identities=12% Similarity=0.022 Sum_probs=154.0
Q ss_pred CccccccccCCccccchhhhcCCCCCCCCc--------cccccccccCCHHHHHHHHHHHHHHHHHCCceEEEEEEeccC
Q psy8141 8 PHSTKIVHEDKKTIADTDKHFKPSDNDSST--------DQVAPLWQYKTISDLSNQKSEVAADLEESKYQNAELRLSIYG 79 (480)
Q Consensus 8 p~~~l~~h~~~~~~~~~~~f~~~~~~~~~~--------~~l~~~f~l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~ 79 (480)
+-++-|.|+|+....+-.++ +. +..|. .+.+..| |.+++.+=+...++.+.+.|++++=-.+.+..
T Consensus 21 gfv~~H~HlDk~~~~~~~~~-~~--~~~g~l~e~i~~~~~~k~~~---t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~ 94 (329)
T PRK06886 21 GWVNAHAHADRAFTMTPEKI-AI--YHYANLQQKWDLVDEVKRNS---TVEDYYARFSQAIELMISQGVTAFGTFVDIDP 94 (329)
T ss_pred CCccccccccccccCCCccc-cc--cCCCCHHHHHHHHHHHhccC---CHHHHHHHHHHHHHHHHHcCcccEeeeeccCC
Confidence 34788999998544333322 10 11221 1122222 67788888888999999999999877775522
Q ss_pred -CChhhHHHHHHHHHHccc-ccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceee
Q psy8141 80 -KSEDEWDKLATWAIESNV-YSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIG 157 (480)
Q Consensus 80 -~~~~e~~~la~w~~~~~~-~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvG 157 (480)
.....|+.+.+-..+++- +...+ +.+|... ... .+..+-|.+.+ .. .+.|.|
T Consensus 95 ~~~l~~~~a~~~~r~~~~~~idlq~---vafPq~g-~~~-~~~~~l~~~al--------------------~~-advvGG 148 (329)
T PRK06886 95 ICEDRAIIAAHKAREVYKHDIILKF---ANQTLKG-VIE-PTAKKWFDIGS--------------------EM-VDMIGG 148 (329)
T ss_pred CccccHHHHHHHHHHHhcCcceEEE---EecChhh-ccC-ccHHHHHHHHH--------------------Hh-CCEEeC
Confidence 134556666554443322 22222 1222211 000 01111122211 11 344555
Q ss_pred EeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhH-HHHh-
Q psy8141 158 FDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHL-VCGF- 235 (480)
Q Consensus 158 fDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l-~~a~- 235 (480)
+.-.++.+ ...+....-..+..| +++|+.. -.|+.|.+++... .+.+
T Consensus 149 iP~~~~~~-------------------~~~~~e~l~~~~~lA---------~~~g~~I---d~Hlde~~~~~~~~le~l~ 197 (329)
T PRK06886 149 LPYRDELD-------------------YGRGLEAMDILLDTA---------KSLGKMV---HVHVDQFNTPKEKETEQLC 197 (329)
T ss_pred ccCCcCCC-------------------CCCCHHHHHHHHHHH---------HHcCCCe---EEeECCCCchhHHHHHHHH
Confidence 63211111 024667788888888 9999876 9999998754221 1111
Q ss_pred --------hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCC
Q psy8141 236 --------MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLS 307 (480)
Q Consensus 236 --------l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlS 307 (480)
.+.--++|++.+...+ -..-..+..++...+|.|+.||.|
T Consensus 198 ~~~~~~Gl~grV~~sH~~~L~~~~--------------------------------~~~~~~~i~~La~agi~Vv~~P~s 245 (329)
T PRK06886 198 DKTIEHGMQGRVVAIHGISIGAHS--------------------------------KEYRYRLYQKMREADMMVIACPMA 245 (329)
T ss_pred HHHHHcCCCCCEEEEEeccccCcC--------------------------------hhhHHHHHHHHHHcCCeEEECchh
Confidence 1212233444421100 000123455667789999999999
Q ss_pred chhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccC--cCCCCcChHHHHHHH
Q psy8141 308 NNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ--FHFTKEPLMEEYSIA 385 (480)
Q Consensus 308 N~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~--f~~T~epL~eEY~~a 385 (480)
|..+.... . ..|+ .-.--|++.|.+.|++|+|+||+..- +-+..-.+.++...+
T Consensus 246 nl~l~~~~------------~-----~~p~-------~rGv~pv~eL~~aGV~V~lGtDnv~D~~~p~g~~Dmle~~~l~ 301 (329)
T PRK06886 246 WIDSNRKE------------D-----LMPF-------HNALTPADEMIPEGITVALGTDNICDYMVPLCEGDMWQELSLL 301 (329)
T ss_pred hhhhcccc------------c-----cCcC-------CCCCCCHHHHHHCCCeEEEecCCCcccCCCCCCCCHHHHHHHH
Confidence 97653310 0 0000 01124999999999999999999862 222334799999999
Q ss_pred HHHcCCC-HHHHHHHH-HHHHHHcCC
Q psy8141 386 AQVWKLS-SCDMCELA-RNSVLMSGF 409 (480)
Q Consensus 386 a~~~~Ls-~~Dl~eLa-rNSv~~S~~ 409 (480)
+...++. ..++.+++ .|+.+.-++
T Consensus 302 ~~~~~~~~~~~~l~maT~~gAraLgl 327 (329)
T PRK06886 302 AAGCRFYDLDEMVNIASINGRKVLGL 327 (329)
T ss_pred HHHcCCCCHHHHHHHHhhhHHHHhCC
Confidence 8887655 45555544 366555443
No 29
>PRK14085 imidazolonepropionase; Provisional
Probab=98.35 E-value=2.5e-05 Score=81.75 Aligned_cols=138 Identities=14% Similarity=0.039 Sum_probs=97.7
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchh
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQ 266 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~ 266 (480)
++..+......| ++.|+.. +.||++.++...+..+. ++..+|.|+..+
T Consensus 205 ~~~~l~~~~~~a---------~~~g~~v---~~H~~~~~~~~~v~~~~~~g~~~i~H~~~l------------------- 253 (382)
T PRK14085 205 DEDQSRRVLTAG---------RAAGLGL---RVHGNQLGPGPGVRLAVELGAASVDHCTYL------------------- 253 (382)
T ss_pred CHHHHHHHHHHH---------HHcCCCe---EEEeCcccCChHHHHHHHcCCCcHHHhCCC-------------------
Confidence 456677777888 8889776 99999877655566666 788899999873
Q ss_pred hhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccc
Q psy8141 267 HLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNY 346 (480)
Q Consensus 267 ~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy 346 (480)
++....++...++.+.+||.+|..++.
T Consensus 254 --------------------~~~~~~~la~~gv~~~~~P~~~~~~~~--------------------------------- 280 (382)
T PRK14085 254 --------------------TDADVDALAGSGTVATLLPGAEFSTRQ--------------------------------- 280 (382)
T ss_pred --------------------CHHHHHHHHHcCCEEEECcHHHHhcCC---------------------------------
Confidence 233444567789999999999876422
Q ss_pred cCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCC
Q psy8141 347 HRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMSGFP 410 (480)
Q Consensus 347 ~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~e-LarNSv~~S~~~ 410 (480)
.--|++.+.+.|++|+++||.+...... ..+..+...+....+++..+..+ .+.|+....+.+
T Consensus 281 ~~~~~~~l~~aGv~v~lgsD~~~~~~~~-~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~ 344 (382)
T PRK14085 281 PYPDARRLLDAGVTVALASDCNPGSSYT-SSMPFCVALAVRQMGMTPAEAVWAATAGGARALRRD 344 (382)
T ss_pred CCchHHHHHHCCCcEEEEeCCCCCCChH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCC
Confidence 1258999999999999999985211110 12334444455567899988655 456777777764
No 30
>PRK06687 chlorohydrolase; Validated
Probab=98.27 E-value=0.00016 Score=76.51 Aligned_cols=89 Identities=19% Similarity=0.145 Sum_probs=64.9
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+.-..++..+++.+..||.||..++.+ -.|++.|++.|++|+|+||.
T Consensus 258 ~~~~~~la~~g~~v~~~P~sn~~l~~g---------------------------------~~p~~~~~~~Gv~v~lGtD~ 304 (419)
T PRK06687 258 EREIERLASSQVAIAHNPISNLKLASG---------------------------------IAPIIQLQKAGVAVGIATDS 304 (419)
T ss_pred HHHHHHHHHcCCeEEECcHHhhhhccC---------------------------------CCcHHHHHHCCCeEEEeCCC
Confidence 344456777999999999999876432 36999999999999999998
Q ss_pred ccCcCCCCcChHHHHHHHHHHc--------CCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQVW--------KLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~~--------~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
+.-... -.+.+|...++... .++..++.++| .|+.+..+.++
T Consensus 305 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~ 355 (419)
T PRK06687 305 VASNNN--LDMFEEGRTAALLQKMKSGDASQFPIETALKVLTIEGAKALGMEN 355 (419)
T ss_pred CCCCCC--hhHHHHHHHHHHHhccccCCCccCCHHHHHHHHhHHHHHHcCCCC
Confidence 642221 24778877665443 27788877766 58888777653
No 31
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=98.22 E-value=0.00043 Score=72.72 Aligned_cols=86 Identities=23% Similarity=0.098 Sum_probs=64.2
Q ss_pred HHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCcc
Q psy8141 290 LQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPL 369 (480)
Q Consensus 290 L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl 369 (480)
-..++..+++.+..||+||..++. .--|++.|+++|++|+++||.+.
T Consensus 253 ~~~~l~~~g~~v~~~P~~~~~~~~---------------------------------g~~~~~~~~~~Gv~v~lGtD~~~ 299 (401)
T TIGR02967 253 ECQRLAETGAAIAHCPTSNLFLGS---------------------------------GLFNLKKALEHGVRVGLGTDVGG 299 (401)
T ss_pred HHHHHHHcCCeEEEChHHHHHhcc---------------------------------CCCCHHHHHHCCCeEEEecCCCC
Confidence 344667789999999999987532 23589999999999999999864
Q ss_pred CcCCCCcChHHHHHHHHHH-----cCCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 370 QFHFTKEPLMEEYSIAAQV-----WKLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 370 ~f~~T~epL~eEY~~aa~~-----~~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
.... ++.++...+... .+++..+..+++ .|+.+.-+.++
T Consensus 300 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~~A~~lg~~~ 344 (401)
T TIGR02967 300 GTSF---SMLQTLREAYKVSQLQGARLSPFEAFYLATLGGARALDLDD 344 (401)
T ss_pred CCCc---CHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHhCCcC
Confidence 3222 477887776554 457888877765 68887777653
No 32
>PRK09228 guanine deaminase; Provisional
Probab=98.15 E-value=0.00066 Score=72.55 Aligned_cols=88 Identities=24% Similarity=0.140 Sum_probs=65.3
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+.-..++..+++.+.+||.||..++.+ -.|+..|.++|++|+|+||.
T Consensus 276 ~~~~~~la~~g~~v~~~P~sn~~lg~g---------------------------------~~~~~~~~~~Gv~v~lGtD~ 322 (433)
T PRK09228 276 DRERRRLAETGAAIAFCPTSNLFLGSG---------------------------------LFDLKRADAAGVRVGLGTDV 322 (433)
T ss_pred HHHHHHHHHcCCeEEECCccHHhhcCC---------------------------------CcCHHHHHHCCCeEEEecCC
Confidence 333446677899999999999876432 36999999999999999998
Q ss_pred ccCcCCCCcChHHHHHHHHHH-----cCCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQV-----WKLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~-----~~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
+..... .+.++...+... ..++..++.+++ .|+.+.-++++
T Consensus 323 ~~~~~~---d~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~~A~~lg~~~ 369 (433)
T PRK09228 323 GGGTSF---SMLQTMNEAYKVQQLQGYRLSPFQAFYLATLGGARALGLDD 369 (433)
T ss_pred CCCCCC---CHHHHHHHHHHHhhcccCCCCHHHHHHHHhHHHHHHhCCCC
Confidence 653333 477887776654 456888877765 68888877654
No 33
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=97.86 E-value=0.0043 Score=66.17 Aligned_cols=88 Identities=24% Similarity=0.145 Sum_probs=65.1
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+.-..++...++.+..||.||..++.+ --|++.|.+.|++|+|+||.
T Consensus 273 ~~~~~~l~~~g~~v~~~P~sn~~l~~g---------------------------------~~~~~~~~~~Gv~v~lGtD~ 319 (429)
T cd01303 273 EEEFNLLKERGASVAHCPTSNLFLGSG---------------------------------LFDVRKLLDAGIKVGLGTDV 319 (429)
T ss_pred HHHHHHHHHcCCEEEECccchhhhccC---------------------------------CCCHHHHHHCCCeEEEeccC
Confidence 444456778899999999999876432 25899999999999999998
Q ss_pred ccCcCCCCcChHHHHHHHHHHc-----------CCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQVW-----------KLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~~-----------~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
+..... .+.+|...++... +++..++.+++ .|+.++.+.++
T Consensus 320 ~~~~~~---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~gA~~lg~~~ 372 (429)
T cd01303 320 GGGTSF---SMLDTLRQAYKVSRLLGYELGGHAKLSPAEAFYLATLGGAEALGLDD 372 (429)
T ss_pred CCCCCc---cHHHHHHHHHHHHHhhccccCCcCCCCHHHHHHHHhhHHHHHcCCCC
Confidence 754333 4778887665531 35777776664 78888888754
No 34
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=97.78 E-value=0.0043 Score=66.27 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=56.0
Q ss_pred HHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccC
Q psy8141 291 QYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ 370 (480)
Q Consensus 291 ~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~ 370 (480)
..++..+++.+..||.||..++.+ --|+++|+++|++|+|+||...
T Consensus 270 ~~~la~~g~~v~~~P~sn~~l~~g---------------------------------~~p~~~~~~~Gv~v~lGtD~~~- 315 (442)
T PRK07203 270 IDLLKETDTFVVHNPESNMGNAVG---------------------------------YNPVLEMIKNGILLGLGTDGYT- 315 (442)
T ss_pred HHHHHhcCCeEEECchhhhhcccC---------------------------------CCCHHHHHHCCCeEEEcCCCCC-
Confidence 346778999999999999876432 3699999999999999999741
Q ss_pred cCCCCcChHHHHHHHHHHcC-------CCHHHHHHH-HHHHHHHcC
Q psy8141 371 FHFTKEPLMEEYSIAAQVWK-------LSSCDMCEL-ARNSVLMSG 408 (480)
Q Consensus 371 f~~T~epL~eEY~~aa~~~~-------Ls~~Dl~eL-arNSv~~S~ 408 (480)
..+.+|+..+....+ .+..++.++ ..|+.+..+
T Consensus 316 -----~d~~~~~~~a~~~~~~~~~~~~~~~~~~~~~aT~~gA~~lg 356 (442)
T PRK07203 316 -----SDMFESYKVANFKHKHAGGDPNVGWPESPAMLFENNNKIAE 356 (442)
T ss_pred -----ccHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 258899888754422 123454443 356666554
No 35
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=97.78 E-value=0.0058 Score=64.97 Aligned_cols=82 Identities=16% Similarity=0.122 Sum_probs=60.5
Q ss_pred HHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccC
Q psy8141 291 QYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ 370 (480)
Q Consensus 291 ~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~ 370 (480)
..++..+++.+..||.||..++.+ --|+++|++.|++|+|+||.+..
T Consensus 271 ~~~la~~g~~v~~~P~sn~~lg~g---------------------------------~~p~~~l~~~Gv~v~lGtD~~~~ 317 (418)
T cd01313 271 TLLLGRSGAVVGLCPTTEANLGDG---------------------------------IFPAAALLAAGGRIGIGSDSNAR 317 (418)
T ss_pred HHHHHHcCCEEEECCCchhhccCC---------------------------------CCCHHHHHHCCCcEEEecCCCCC
Confidence 456778999999999999876432 25999999999999999996532
Q ss_pred cCCCCcChHHHHHHHHHH--------------cCCCHHHHHH-HHHHHHHHcCCC
Q psy8141 371 FHFTKEPLMEEYSIAAQV--------------WKLSSCDMCE-LARNSVLMSGFP 410 (480)
Q Consensus 371 f~~T~epL~eEY~~aa~~--------------~~Ls~~Dl~e-LarNSv~~S~~~ 410 (480)
..+.++...+... ..++..++.+ ..+|+..+-+.+
T Consensus 318 -----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~ 367 (418)
T cd01313 318 -----IDLLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA 367 (418)
T ss_pred -----cCHHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC
Confidence 1477777766532 2677777655 456888777763
No 36
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=97.78 E-value=0.00011 Score=75.12 Aligned_cols=155 Identities=16% Similarity=0.095 Sum_probs=99.5
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccch
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTI 265 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~ 265 (480)
.++..+......| ++.|+.. +.||++. ..+..++ .+.++|.||..+
T Consensus 157 ~~~e~l~~~~~~A---------~~~g~~v---~~H~~~~---~~i~~~l~~G~~~i~H~~~~------------------ 203 (342)
T cd01299 157 FSEEELRAIVDEA---------HKAGLYV---AAHAYGA---EAIRRAIRAGVDTIEHGFLI------------------ 203 (342)
T ss_pred cCHHHHHHHHHHH---------HHcCCEE---EEEeCCH---HHHHHHHHcCCCEEeecCCC------------------
Confidence 3566777777777 8888776 9999875 4455556 788999999872
Q ss_pred hhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCccccc
Q psy8141 266 QHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLN 345 (480)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 345 (480)
++....++..+++.++.||.++..+..........+........ ...
T Consensus 204 ---------------------~~~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 250 (342)
T cd01299 204 ---------------------DDETIELMKEKGIFLVPTLATYEALAAEGAAPGLPADSAEKVAL------------VLE 250 (342)
T ss_pred ---------------------CHHHHHHHHHCCcEEeCcHHHHHHHHhhccccCCCHHHHHHHHH------------HHH
Confidence 34555567788999999998876531000000000000000000 000
Q ss_pred ccCCchHHHHHCCCcEEEcCCCcc--CcCCCCcChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 346 YHRNPLPEYLARGLVVSLSTDDPL--QFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 346 y~~hP~~~l~~~Gl~VsLsTDDPl--~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
-...|++.+.+.|++|+++||.|. ..+. .+.+|+..+.+ .+++..+...++ .|+....+.++
T Consensus 251 ~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~~---~~~~e~~~~~~-~~~~~~~al~~~T~~~a~~~g~~~ 315 (342)
T cd01299 251 AGRDALRRAHKAGVKIAFGTDAGFPVPPHG---WNARELELLVK-AGGTPAEALRAATANAAELLGLSD 315 (342)
T ss_pred HHHHHHHHHHHcCCeEEEecCCCCCCCchh---HHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHhCccC
Confidence 123689999999999999999985 2333 46788776654 578988876655 68877766553
No 37
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=97.66 E-value=0.00057 Score=71.91 Aligned_cols=88 Identities=18% Similarity=0.092 Sum_probs=65.3
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+.-..++..+++.+..||.||..++.. ..|+++|++.|++|+|+||.
T Consensus 243 ~~~~~~l~~~g~~v~~~P~sn~~lg~g---------------------------------~~p~~~~~~~Gv~v~lGtD~ 289 (381)
T cd01312 243 LEEAEILASRGASIALCPRSNRLLNGG---------------------------------KLDVSELKKAGIPVSLGTDG 289 (381)
T ss_pred HHHHHHHHHcCCeEEECcchhhhhcCC---------------------------------CcCHHHHHHCCCcEEEeCCC
Confidence 333346677899999999999876432 37999999999999999998
Q ss_pred ccCcCCCCcChHHHHHHHHHHcC-----CCHHHHHH-HHHHHHHHcCCC
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQVWK-----LSSCDMCE-LARNSVLMSGFP 410 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~~~-----Ls~~Dl~e-LarNSv~~S~~~ 410 (480)
+.-+.. -.+.+|+..++.... ++..++.+ ..+|+.+.-+.+
T Consensus 290 ~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~ 336 (381)
T cd01312 290 LSSNIS--LSLLDELRALLDLHPEEDLLELASELLLMATLGGARALGLN 336 (381)
T ss_pred CccCCC--CCHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHhCCC
Confidence 864433 258899999888754 45555544 456887777653
No 38
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=97.62 E-value=0.0063 Score=65.11 Aligned_cols=88 Identities=20% Similarity=0.124 Sum_probs=61.5
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+....++...++.+..||.||..++. ...|++.+.+.|++|+++||.
T Consensus 276 ~~~~~~la~~g~~v~~~P~~~~~l~~---------------------------------~~~~~~~~~~~Gv~v~lGtD~ 322 (451)
T PRK08203 276 DAEIARLARTGTGVAHCPCSNMRLAS---------------------------------GIAPVRELRAAGVPVGLGVDG 322 (451)
T ss_pred HHHHHHHHhcCCeEEECcHHhhhhcc---------------------------------CCCCHHHHHHCCCeEEEecCC
Confidence 33344567789999999999987642 236999999999999999998
Q ss_pred ccCcCCCCcChHHHHHHHHHHc-------CCCHHHHHHH-HHHHHHHcCCC
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQVW-------KLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~~-------~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
+.-... ..+.+|...+.... .++..++.++ +.|+....+.+
T Consensus 323 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~T~~~A~~lg~~ 371 (451)
T PRK08203 323 SASNDG--SNLIGEARQALLLQRLRYGPDAMTAREALEWATLGGARVLGRD 371 (451)
T ss_pred CccCCC--cCHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 753221 13667776554322 3677776555 46888877754
No 39
>PRK07583 cytosine deaminase-like protein; Validated
Probab=97.62 E-value=0.00084 Score=71.76 Aligned_cols=150 Identities=19% Similarity=0.194 Sum_probs=93.3
Q ss_pred HhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhh-----HHH-Hh----hcccccccccccccccchhhhhhh
Q psy8141 190 YAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQH-----LVC-GF----MMAENISHGLLLRKAPVLQYLYYL 259 (480)
Q Consensus 190 ~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~-----l~~-a~----l~a~RIgHG~~l~~~~~~~~~~~~ 259 (480)
..++..+..| ++.|+.+ ..||+|.+.+.. +.+ +. .+.-+++|+..+..
T Consensus 212 ~~l~~i~~lA---------~~~G~~v---~vH~~E~~~~~~~~l~~~~~~~~~~G~~~~v~i~H~~~l~~---------- 269 (438)
T PRK07583 212 AQLDRLFRLA---------RERGLDL---DLHVDETGDPASRTLKAVAEAALRNGFEGKVTCGHCCSLAV---------- 269 (438)
T ss_pred HHHHHHHHHH---------HHhCCCc---EEeECCCCCchHHHHHHHHHHHHHhCCCCCEEEEeccchhc----------
Confidence 4677888888 8899876 999999875422 111 11 23557788877321
Q ss_pred hcccchhhhhhhchhhhhccccccccCC----hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccC
Q psy8141 260 AQIGTIQHLVCGFMMAENISHGLLLRKA----PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMS 335 (480)
Q Consensus 260 ~~~g~~~~~~~~~l~~~~~~~~~~l~~~----p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~ 335 (480)
.+ ..+..++...+|.++.||++|..+.... .. ..
T Consensus 270 --------------------------~~~~~~~~~i~~la~~gv~vv~~P~~~~~l~~~~---~~-------------~~ 307 (438)
T PRK07583 270 --------------------------QPEEQAQATIALVAEAGIAIVSLPMCNLYLQDRQ---PG-------------RT 307 (438)
T ss_pred --------------------------CCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCC---cC-------------CC
Confidence 12 2556677889999999999997653210 00 00
Q ss_pred CCCCCcccccccCCchHHHHHCCCcEEEcCCCcc--CcCCCCcChHHHHHHHHHHc--CCCHHHH-HHHHHHHHHHcCCC
Q psy8141 336 PLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPL--QFHFTKEPLMEEYSIAAQVW--KLSSCDM-CELARNSVLMSGFP 410 (480)
Q Consensus 336 ~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl--~f~~T~epL~eEY~~aa~~~--~Ls~~Dl-~eLarNSv~~S~~~ 410 (480)
| ..-...|++.|.+.|++|+++||.+. .+....-.+.+....+.... +.+..+. .-...|+...-+.+
T Consensus 308 p-------~~~~~~~v~~l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~~~~~~~~~al~~~T~~~A~~lg~~ 380 (438)
T PRK07583 308 P-------RWRGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRILHLDHPYDDWPAAVTTTPADIMGLP 380 (438)
T ss_pred C-------CCCCcchHHHHHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHHhcCCcHHHHHHHHhHHHHHHcCCC
Confidence 0 01123689999999999999999743 11111124677777766543 4455554 34555777766654
No 40
>PRK08204 hypothetical protein; Provisional
Probab=97.60 E-value=0.0008 Score=71.71 Aligned_cols=88 Identities=16% Similarity=0.030 Sum_probs=63.6
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+.-..++...++.+..||.||..++. ...|++.+.+.|++|+|+||.
T Consensus 256 ~~~~~~la~~g~~v~~~P~~~~~~g~---------------------------------~~~~~~~~~~~Gv~v~lGtD~ 302 (449)
T PRK08204 256 DDELKLLADSGGSFSVTPEIEMMMGH---------------------------------GYPVTGRLLAHGVRPSLGVDV 302 (449)
T ss_pred HHHHHHHHHcCCCEEEChHHHhhhcC---------------------------------CCCcHHHHHhcCCceeecccc
Confidence 33444667789999999999876432 136999999999999999998
Q ss_pred ccCcCCCCcChHHHHHHHHHH-------------------cCCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQV-------------------WKLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~-------------------~~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
+..... .+.+|...+... .+++..+...++ .|+....+.++
T Consensus 303 ~~~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~ 363 (449)
T PRK08204 303 VTSTGG---DMFTQMRFALQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLED 363 (449)
T ss_pred CCCCCc---CHHHHHHHHHHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCC
Confidence 754333 467777666532 357777765554 78888888764
No 41
>PRK07572 cytosine deaminase; Validated
Probab=97.54 E-value=0.013 Score=62.33 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=60.8
Q ss_pred HHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCc
Q psy8141 289 VLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDP 368 (480)
Q Consensus 289 ~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDP 368 (480)
....++..+++.++.||.||..+.... .. .| ..-.--|++.|.++|++|+|+||.+
T Consensus 256 ~~~~~la~~g~~vv~~P~~n~~l~~~~--~~---------------~~-------~~~g~~~v~~l~~~GV~v~lGtD~~ 311 (426)
T PRK07572 256 KLIPLMAEAGVNAIANPLINITLQGRH--DT---------------YP-------KRRGMTRVPELMAAGINVAFGHDCV 311 (426)
T ss_pred HHHHHHHHcCCeEEECchhhhhhcCCC--CC---------------CC-------CCCCCcCHHHHHHCCCcEEEecCCC
Confidence 445577889999999999998764210 00 00 0012358999999999999999985
Q ss_pred c-Cc-CCCCcChHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCCC
Q psy8141 369 L-QF-HFTKEPLMEEYSIAAQVWKLSSCDMC-----ELARNSVLMSGFP 410 (480)
Q Consensus 369 l-~f-~~T~epL~eEY~~aa~~~~Ls~~Dl~-----eLarNSv~~S~~~ 410 (480)
. .| ......+.++...++...+++..+-. -...|+.+.-+.+
T Consensus 312 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~l~~~l~~aT~~~A~~lgl~ 360 (426)
T PRK07572 312 MDPWYSLGSGDMLEVAHMGLHVAQMTGQDAMRACFDAVTVNPARIMGLE 360 (426)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhhcchHHhhCCC
Confidence 3 11 11113577877776766667654422 2444555555543
No 42
>PRK12393 amidohydrolase; Provisional
Probab=97.51 E-value=0.00073 Score=72.66 Aligned_cols=89 Identities=21% Similarity=0.158 Sum_probs=62.6
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++.-..++...++.+..||.||..++.. -.|++.|++.|++|+|+||
T Consensus 279 ~~~d~~~la~~g~~v~~~P~sn~~lg~g---------------------------------~~~~~~~~~~Gv~v~lGtD 325 (457)
T PRK12393 279 DAEEIALLAQTGTGIAHCPQSNGRLGSG---------------------------------IAPALAMEAAGVPVSLGVD 325 (457)
T ss_pred CHHHHHHHHHcCCeEEECchhhhhhccc---------------------------------CCCHHHHHHCCCeEEEecC
Confidence 3444456778999999999999876432 3699999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHHHcC-------CCHHHHHHH-HHHHHHHcCCC
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQVWK-------LSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~~~~-------Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
.+.-... -.+.+|...+..... ++..++.++ +.|+....+.+
T Consensus 326 ~~~~~~~--~d~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~T~~~A~~l~~~ 375 (457)
T PRK12393 326 GAASNES--ADMLSEAHAAWLLHRAEGGADATTVEDVVHWGTAGGARVLGLD 375 (457)
T ss_pred CcccCCC--ccHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHhHHHHHHhCCC
Confidence 8763221 247788776554432 666665544 45677766653
No 43
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=97.48 E-value=0.024 Score=61.04 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=59.3
Q ss_pred HHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccC
Q psy8141 291 QYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ 370 (480)
Q Consensus 291 ~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~ 370 (480)
..++...++.+..||.||..++.+ --|+++|++.|++|+|+||..-
T Consensus 280 ~~~la~~g~~v~~~P~sn~~lg~g---------------------------------~~pi~~l~~~Gv~v~lGTD~~~- 325 (455)
T TIGR02022 280 TALLARSGAVAGLCPTTEANLGDG---------------------------------IFPAVDFVAAGGRFGIGSDSHV- 325 (455)
T ss_pred HHHHHHcCCeEEEChhhhccccCC---------------------------------CCCHHHHHHCCCeEEEECCCCC-
Confidence 446677999999999999876432 3699999999999999999632
Q ss_pred cCCCCcChHHHHHHHHHHcC---------------CCHHH-HHHHHHHHHHHcCC
Q psy8141 371 FHFTKEPLMEEYSIAAQVWK---------------LSSCD-MCELARNSVLMSGF 409 (480)
Q Consensus 371 f~~T~epL~eEY~~aa~~~~---------------Ls~~D-l~eLarNSv~~S~~ 409 (480)
. ..+.+|...++.... .+..+ +.-...|+.++-+.
T Consensus 326 -~---~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~ 376 (455)
T TIGR02022 326 -V---IDVAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL 376 (455)
T ss_pred -C---CCHHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC
Confidence 1 247788887754422 23445 45566788888775
No 44
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=97.48 E-value=0.00097 Score=71.21 Aligned_cols=89 Identities=22% Similarity=0.155 Sum_probs=63.2
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+.-..++...++.+..||.||..++. ...|++.|++.|++|+++||.
T Consensus 264 ~~~~~~la~~g~~i~~~P~~~~~~~~---------------------------------~~~~~~~l~~~Gv~v~lGtD~ 310 (443)
T PRK09045 264 DAEIALLAETGCSVVHCPESNLKLAS---------------------------------GFCPVAKLLQAGVNVALGTDG 310 (443)
T ss_pred HHHHHHHHHcCCeEEECHHHHhhhcc---------------------------------CCCcHHHHHHCCCeEEEecCC
Confidence 33344556789999999999875421 237999999999999999998
Q ss_pred ccCcCCCCcChHHHHHHHHHH--------cCCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQV--------WKLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~--------~~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
+..++. ..+.+|...++.. .+++..+..+++ .|+....+.++
T Consensus 311 ~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~ 361 (443)
T PRK09045 311 AASNND--LDLFGEMRTAALLAKAVAGDATALPAHTALRMATLNGARALGLDD 361 (443)
T ss_pred CCCCCC--ccHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHhHHHHHHcCCCC
Confidence 854332 2466777665432 247888876666 68888877653
No 45
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=97.31 E-value=0.0026 Score=67.85 Aligned_cols=85 Identities=27% Similarity=0.314 Sum_probs=61.0
Q ss_pred HHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccC
Q psy8141 291 QYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ 370 (480)
Q Consensus 291 ~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~ 370 (480)
..++...++.+..||.||..++.+ ..|+++|+++|++|+++||.+.-
T Consensus 255 ~~~la~~g~~v~~~P~~n~~~~~~---------------------------------~~p~~~~~~~Gv~v~lGtD~~~~ 301 (430)
T PRK06038 255 IEILRERGVNVSHNPVSNMKLASG---------------------------------IAPVPKLLERGVNVSLGTDGCAS 301 (430)
T ss_pred HHHHHhcCCEEEEChHHhhhhccC---------------------------------CCCHHHHHHCCCeEEEeCCCCcc
Confidence 346677999999999999875321 25999999999999999997643
Q ss_pred cCCCCcChHHHHHHHHHHc--------CCCHHHHHHHH-HHHHHHcCCC
Q psy8141 371 FHFTKEPLMEEYSIAAQVW--------KLSSCDMCELA-RNSVLMSGFP 410 (480)
Q Consensus 371 f~~T~epL~eEY~~aa~~~--------~Ls~~Dl~eLa-rNSv~~S~~~ 410 (480)
.+. -.+.+|...+.... .++..+..+++ .|+....+.+
T Consensus 302 ~~~--~d~~~~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~gA~~lg~~ 348 (430)
T PRK06038 302 NNN--LDMFEEMKTAALLHKVNTMDPTALPARQVLEMATVNGAKALGIN 348 (430)
T ss_pred CCC--cCHHHHHHHHHHHhhhccCCCCcCCHHHHHHHHhHHHHHHhCCC
Confidence 221 24778887765332 45677765554 4888877763
No 46
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=97.24 E-value=0.0036 Score=66.90 Aligned_cols=84 Identities=20% Similarity=0.198 Sum_probs=61.8
Q ss_pred HHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCc
Q psy8141 292 YLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQF 371 (480)
Q Consensus 292 yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f 371 (480)
.++..+++.+..||.||..++.+ --|+++|+++|++|+|+||.+.-.
T Consensus 263 ~~la~~g~~v~~~P~sn~~l~~g---------------------------------~~p~~~~~~~Gv~v~lGtD~~~~~ 309 (435)
T PRK15493 263 AFLAEHDVRVAHNPNSNLKLGSG---------------------------------IANVKAMLEAGIKVGIATDSVASN 309 (435)
T ss_pred HHHHHcCCeEEEChHHHHHHhcC---------------------------------cccHHHHHHCCCeEEEccCccccC
Confidence 45677999999999999876432 259999999999999999986421
Q ss_pred CCCCcChHHHHHHHHHH--------cCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 372 HFTKEPLMEEYSIAAQV--------WKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 372 ~~T~epL~eEY~~aa~~--------~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
. ...+.+|...+... ..++..++.++ +.|+....+.+
T Consensus 310 ~--~~d~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~ 355 (435)
T PRK15493 310 N--NLDMFEEMRIATLLQKGIHQDATALPVETALTLATKGAAEVIGMK 355 (435)
T ss_pred C--CcCHHHHHHHHHHHHhhccCCCCcCCHHHHHHHHhHHHHHHcCCC
Confidence 1 12477888765443 25778887776 46777777664
No 47
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=97.20 E-value=0.048 Score=59.27 Aligned_cols=83 Identities=17% Similarity=0.099 Sum_probs=57.9
Q ss_pred HHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCc
Q psy8141 289 VLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDP 368 (480)
Q Consensus 289 ~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDP 368 (480)
....++..+++.+..||++|..++. .-.|++.|.+.|++|+|+||..
T Consensus 293 ~~~~~la~~g~~v~~~P~~~~~~g~---------------------------------~~~p~~~l~~~Gv~v~lGtD~~ 339 (488)
T PRK06151 293 DDLALLAEHGVSIVHCPLVSARHGS---------------------------------ALNSFDRYREAGINLALGTDTF 339 (488)
T ss_pred HHHHHHHhcCCEEEECchhhhhhcc---------------------------------ccccHHHHHHCCCcEEEECCCC
Confidence 4555677799999999999876532 2379999999999999999962
Q ss_pred cCcCCCCcChHHHHHHHHHH--------cCCCHHHHHHHH-HHHHHHcCCC
Q psy8141 369 LQFHFTKEPLMEEYSIAAQV--------WKLSSCDMCELA-RNSVLMSGFP 410 (480)
Q Consensus 369 l~f~~T~epL~eEY~~aa~~--------~~Ls~~Dl~eLa-rNSv~~S~~~ 410 (480)
.. .+.++...+... ..++..++.+++ .|+.+..+.+
T Consensus 340 ---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~ 384 (488)
T PRK06151 340 ---PP---DMVMNMRVGLILGRVVEGDLDAASAADLFDAATLGGARALGRD 384 (488)
T ss_pred ---Cc---cHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 11 355665554422 125777765544 6777777654
No 48
>KOG1096|consensus
Probab=97.17 E-value=0.00014 Score=80.01 Aligned_cols=229 Identities=22% Similarity=0.329 Sum_probs=151.3
Q ss_pred HHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCC-------CCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhh
Q psy8141 129 QNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDES-------KPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANL 201 (480)
Q Consensus 129 ~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~-------~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl 201 (480)
.-.|+.-...+.+|+-|..|+.- .++-.+|-.+... ....+.++....+|- .-+.||+|-..+-|
T Consensus 504 ~PLFeat~~p~~hp~Lh~FL~~V-~gfDsVdDesk~~~~~Ft~~sp~P~~Wt~~~NPpy-------syYlYY~YaNl~~L 575 (768)
T KOG1096|consen 504 LPLFEATKDPSSHPELHVFLQQV-SGFDSVDDESKYEWKNFTRKSPKPKEWTAEDNPPY-------SYYLYYMYANLAKL 575 (768)
T ss_pred hhhhhcccCCCcchHHHHHHHHh-cCcccccccccccccccccCCCCchhccccCCCch-------hhhHHHHHHHHHHH
Confidence 34444444555555555555432 2344455554322 111223443333332 34579999999999
Q ss_pred hhhhHHHHHCCCCCCCcccccCCCCC-------hhhHHHHh-hcccccccccccccccchhhhhhhhcccchhhhhhh--
Q psy8141 202 TVLNHFRRARDLNTFVLRPHCGEAGP-------IQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCG-- 271 (480)
Q Consensus 202 ~~LN~~r~~~gl~~~~l~~HaGE~~~-------~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~-- 271 (480)
..|..-|...-+-.=+.+.-||.... ++++.-.+ +.. +|++|||||++|||.+++.++|
T Consensus 576 N~lR~~rg~nTf~LRphCgeag~~~hLvsafLla~gIshg~Llrk-----------~PvLQYLyYL~QIpIamSPLSnns 644 (768)
T KOG1096|consen 576 NHLRRARGQNTFTLRPHCGEAGDIEHLVSAFLLAHGISHGILLRK-----------VPVLQYLYYLAQIPIAMSPLSNNS 644 (768)
T ss_pred HHHHHHcCCceEEecCCCCCcCCHHHHHHHHHHhccccchhhhcc-----------chHHHHHHHHHhcchhhccccccc
Confidence 99999997776544556788887543 23344444 332 4889999999999999999999
Q ss_pred chhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhh----hhcccCCCCCCccccccc
Q psy8141 272 FMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLV----VRIAMSPLSNNSLFLNYH 347 (480)
Q Consensus 272 ~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~sy~ 347 (480)
+.+. ..++|-+.|+-+ |+-||.++...|...+++.|+.+..+.+++ .+.+||+++-||+..|--
T Consensus 645 lfl~--------Y~kNPf~~~f~~----GL~VSLSTddpLqf~yTkEPLiEEYSIAAqiykLss~DmCELaRNSVlqSGf 712 (768)
T KOG1096|consen 645 LFLS--------YHKNPFPEYFKR----GLNVSLSTDDPLQFHYTKEPLIEEYSIAAQVYKLSSCDMCELARNSVLQSGF 712 (768)
T ss_pred cccc--------cccCchHHHHHh----hceeeeccCCchhhhcccchHHHHHHHHHHHHhcccccHHHHHhhhhhhhcc
Confidence 6666 678998876644 899999999888777779999887777766 567899999888877766
Q ss_pred CCchHH------HHHCCC--cEEEcCCCccC---cCCCCcChHHHHHHHHHHcC
Q psy8141 348 RNPLPE------YLARGL--VVSLSTDDPLQ---FHFTKEPLMEEYSIAAQVWK 390 (480)
Q Consensus 348 ~hP~~~------l~~~Gl--~VsLsTDDPl~---f~~T~epL~eEY~~aa~~~~ 390 (480)
+|-++. +.+.|. +-++-|.-|-+ |++ |.|..|...+.+.++
T Consensus 713 s~~~K~hWlG~~y~k~g~~gndi~rtNVP~IR~~yR~--eTL~~El~li~~~~~ 764 (768)
T KOG1096|consen 713 SHQLKSHWLGVNYKKEGPEGNDIRRTNVPDIRVAYRY--ETLCQELNLIFDHVN 764 (768)
T ss_pred hHHhhhhhccCchhhcCCCCCccccccchHHHHHHHH--HHHHHHHHHHHHHhh
Confidence 666652 333333 34566666652 443 468888877666543
No 49
>PRK06380 metal-dependent hydrolase; Provisional
Probab=97.15 E-value=0.0026 Score=67.26 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=61.5
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+.-..++..+++.+..||.||..++. -...|+++|++.|++|+|+||.
T Consensus 248 ~~d~~~la~~g~~v~~~P~sn~~l~~--------------------------------~g~~p~~~~~~~Gv~v~lGTD~ 295 (418)
T PRK06380 248 YHEIKLLSKNGVKVSWNSVSNFKLGT--------------------------------GGSPPIPEMLDNGINVTIGTDS 295 (418)
T ss_pred HHHHHHHHHcCCEEEECHHHHHhhcc--------------------------------CCCCcHHHHHHCCCeEEEcCCC
Confidence 33345677789999999999987532 1236999999999999999998
Q ss_pred ccCcCCCCcChHHHHHHHHHHc--------CCCHHHHHHH-HHHHHHHcCC
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQVW--------KLSSCDMCEL-ARNSVLMSGF 409 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~~--------~Ls~~Dl~eL-arNSv~~S~~ 409 (480)
+..... -.+.++...++... .++..++.++ .+|+.+..+.
T Consensus 296 ~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~ 344 (418)
T PRK06380 296 NGSNNS--LDMFEAMKFSALSVKNERWDASIIKAQEILDFATINAAKALEL 344 (418)
T ss_pred CcCCCC--cCHHHHHHHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCC
Confidence 753221 24667777665421 2676776555 4588887765
No 50
>PRK08418 chlorohydrolase; Provisional
Probab=97.14 E-value=0.0039 Score=66.17 Aligned_cols=85 Identities=19% Similarity=0.122 Sum_probs=60.4
Q ss_pred HHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCc
Q psy8141 289 VLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDP 368 (480)
Q Consensus 289 ~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDP 368 (480)
.+. ++..+++.+..||.||..++.+ --|+++|++.|++|+|+||.+
T Consensus 268 di~-~la~~g~~v~~cP~sn~~lg~g---------------------------------~~p~~~~~~~Gi~v~lGtD~~ 313 (408)
T PRK08418 268 ELE-KIKSKNASITHCPFSNRLLSNK---------------------------------ALDLEKAKKAGINYSIATDGL 313 (408)
T ss_pred HHH-HHHHcCCcEEECHhHHHHhcCC---------------------------------CccHHHHHhCCCeEEEeCCCC
Confidence 443 5566899999999999887542 269999999999999999975
Q ss_pred cCcCCCCcChHHHHHHHHHHc-CCC----HHHHH-HHHHHHHHHcCC
Q psy8141 369 LQFHFTKEPLMEEYSIAAQVW-KLS----SCDMC-ELARNSVLMSGF 409 (480)
Q Consensus 369 l~f~~T~epL~eEY~~aa~~~-~Ls----~~Dl~-eLarNSv~~S~~ 409 (480)
.-... -.+.+|...+.... +.+ ..++. -..+|+.++.+.
T Consensus 314 ~~~~~--~~~~~em~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~ 358 (408)
T PRK08418 314 SSNIS--LSLLDELRAALLTHANMPLLELAKILLLSATRYGAKALGL 358 (408)
T ss_pred CCCCC--cCHHHHHHHHHHHhccCCccccHHHHHHHHHHHHHHHhCC
Confidence 42211 25889998776543 222 34544 456788887776
No 51
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=97.06 E-value=0.0063 Score=64.91 Aligned_cols=86 Identities=22% Similarity=0.249 Sum_probs=60.9
Q ss_pred HHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccC
Q psy8141 291 QYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ 370 (480)
Q Consensus 291 ~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~ 370 (480)
..++...++.+..||.||..+.. ...|++.+++.|++|+|+||.+..
T Consensus 264 ~~~~~~~g~~v~~~P~~~~~~~~---------------------------------~~~p~~~~~~~Gv~v~lGtD~~~~ 310 (445)
T PRK07228 264 REILAETGTHVTHCPSSNLKLAS---------------------------------GIAPVPDLLERGINVALGADGAPC 310 (445)
T ss_pred HHHHHHcCCeEEEChHHhhhccc---------------------------------ccCcHHHHHHCCCeEEEcCCCCcc
Confidence 34567789999999999876532 136999999999999999998764
Q ss_pred cCCCCcChHHHHHHHHHH--------cCCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 371 FHFTKEPLMEEYSIAAQV--------WKLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 371 f~~T~epL~eEY~~aa~~--------~~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
... ..+.+|+..+... ..++..++.+++ .|+....+.++
T Consensus 311 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~al~~~T~~~A~~lg~~~ 358 (445)
T PRK07228 311 NNT--LDPFTEMRQAALIQKVDRLGPTAMPARTVFEMATLGGAKAAGFED 358 (445)
T ss_pred CCC--ccHHHHHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 322 1366777655432 246777766655 58888777643
No 52
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=97.05 E-value=0.0054 Score=65.90 Aligned_cols=81 Identities=15% Similarity=0.100 Sum_probs=58.2
Q ss_pred HHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccC
Q psy8141 291 QYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ 370 (480)
Q Consensus 291 ~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~ 370 (480)
..++...++.+..||.||..++.+ --|++.|+++|++|+|+||.+..
T Consensus 280 ~~~la~~g~~v~~~P~sn~~lg~g---------------------------------~~p~~~l~~~Gv~v~lGtD~~~~ 326 (456)
T PRK09229 280 TARLARSGAVAGLCPTTEANLGDG---------------------------------IFPAVDYLAAGGRFGIGSDSHVS 326 (456)
T ss_pred HHHHHHcCCeEEECchhhhhhcCC---------------------------------CCCHHHHHHCCCeEEEecCCCCC
Confidence 446677899999999999876432 26999999999999999997532
Q ss_pred cCCCCcChHHHHHHHHHHc---------------CCCHHHHHHH-HHHHHHHcCC
Q psy8141 371 FHFTKEPLMEEYSIAAQVW---------------KLSSCDMCEL-ARNSVLMSGF 409 (480)
Q Consensus 371 f~~T~epL~eEY~~aa~~~---------------~Ls~~Dl~eL-arNSv~~S~~ 409 (480)
. .+.++...+.... .++..++.++ .+|+..+.+.
T Consensus 327 --~---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~ 376 (456)
T PRK09229 327 --I---DLVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR 376 (456)
T ss_pred --C---CHHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC
Confidence 2 3667777665321 3355566554 4788877775
No 53
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=96.98 E-value=0.0038 Score=66.88 Aligned_cols=64 Identities=20% Similarity=0.189 Sum_probs=50.1
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+.-..+...+++.+..||.||..++.+ --|++.|+++|++|+|+||.
T Consensus 266 ~~d~~~la~~g~~v~~cP~sn~~l~~G---------------------------------~~p~~~~~~~Gv~v~LGtD~ 312 (441)
T TIGR03314 266 DREIELLNETDTFVVHNPESNMGNAVG---------------------------------YNPVLRMFKNGILLGLGTDG 312 (441)
T ss_pred HHHHHHHHHcCCcEEECHHHHhhhccC---------------------------------CCCHHHHHHCCCEEEEcCCC
Confidence 333346677999999999999887532 36999999999999999996
Q ss_pred ccCcCCCCcChHHHHHHHHHHcC
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQVWK 390 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~~~ 390 (480)
. . ..+.+|...++...+
T Consensus 313 ~---~---~d~~~em~~a~~~~~ 329 (441)
T TIGR03314 313 Y---T---SDMFESLKFANFKHK 329 (441)
T ss_pred C---C---cCHHHHHHHHHHHhc
Confidence 3 1 258999998876643
No 54
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=96.70 E-value=0.094 Score=55.80 Aligned_cols=60 Identities=25% Similarity=0.297 Sum_probs=48.3
Q ss_pred HHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcC
Q psy8141 293 LYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFH 372 (480)
Q Consensus 293 l~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~ 372 (480)
+...+++.+..||+||..|+.+ -.|+++++++|++|.+.||.-...+
T Consensus 265 ~l~~~g~~v~~cP~sN~~L~sG---------------------------------~~p~~~~~~~gv~v~~gTD~~~~~~ 311 (421)
T COG0402 265 LLAESGASVVHCPRSNLKLGSG---------------------------------IAPVRRLLERGVNVALGTDGAASNN 311 (421)
T ss_pred HHhhCCCeEEECcchhccccCC---------------------------------CCCHHHHHHcCCCEEEecCCccccC
Confidence 4447899999999999998542 4799999999999999999976443
Q ss_pred -CCCcChHHHHHHHHHH
Q psy8141 373 -FTKEPLMEEYSIAAQV 388 (480)
Q Consensus 373 -~T~epL~eEY~~aa~~ 388 (480)
. .+.+|+..++..
T Consensus 312 ~~---d~l~~~~~a~~l 325 (421)
T COG0402 312 VL---DMLREMRTADLL 325 (421)
T ss_pred hH---HHHHHHHHHHHH
Confidence 3 477888777665
No 55
>PRK05985 cytosine deaminase; Provisional
Probab=96.22 E-value=0.38 Score=50.53 Aligned_cols=140 Identities=15% Similarity=0.107 Sum_probs=81.3
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCCh--hhHHHHh-----hcc---cccccccccccccchhhhh
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPI--QHLVCGF-----MMA---ENISHGLLLRKAPVLQYLY 257 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~--~~l~~a~-----l~a---~RIgHG~~l~~~~~~~~~~ 257 (480)
++..+...+..| +++|+.. ..|+.|.+.. ..+...+ ++. -.++|+..+..-+
T Consensus 189 ~~~~l~~~~~~A---------~~~g~~i---~~Hv~e~~d~~~~~~~~~~e~~~~~g~~~~~~i~H~~~l~~~~------ 250 (391)
T PRK05985 189 PEGQLDIVFGLA---------ERHGVGI---DIHLHEPGELGAFQLERIAARTRALGMQGRVAVSHAFCLGDLP------ 250 (391)
T ss_pred HHHHHHHHHHHH---------HHhCCCc---EEeeCCCCCccHHHHHHHHHHHHHhCCCCCEehhhhhhhhcCC------
Confidence 345667777777 8888765 9999998753 2222222 222 3667766521000
Q ss_pred hhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCC
Q psy8141 258 YLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPL 337 (480)
Q Consensus 258 ~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (480)
-.+.+.+..++..+++.+..||-+..
T Consensus 251 --------------------------~~~~~~~i~~lae~g~~v~~~~~~~~---------------------------- 276 (391)
T PRK05985 251 --------------------------EREVDRLAERLAEAGVAIMTNAPGSV---------------------------- 276 (391)
T ss_pred --------------------------HHHHHHHHHHHHHcCCeEEEeCCCCC----------------------------
Confidence 00012445566778999988854321
Q ss_pred CCCcccccccCCchHHHHHCCCcEEEcCCCcc----CcCCCCcChHHHHHHHHHHcCCCHH----HHHH-HHHHHHHHcC
Q psy8141 338 SNNSLFLNYHRNPLPEYLARGLVVSLSTDDPL----QFHFTKEPLMEEYSIAAQVWKLSSC----DMCE-LARNSVLMSG 408 (480)
Q Consensus 338 ~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl----~f~~T~epL~eEY~~aa~~~~Ls~~----Dl~e-LarNSv~~S~ 408 (480)
.-.|++.|.+.|++|+|+||.+. -++. -.+.++...++...++... +..+ ...|+....+
T Consensus 277 ---------~~~~~~~l~~~Gv~v~lGtD~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg 345 (391)
T PRK05985 277 ---------PVPPVAALRAAGVTVFGGNDGIRDTWWPYGN--GDMLERAMLIGYRSGFRTDDELAAALDCVTHGGARALG 345 (391)
T ss_pred ---------CCCCHHHHHHCCCeEEEecCCCCCCCcCCCC--CcHHHHHHHHHHHHccCChHHHHHHHHHHcchhHHHhC
Confidence 11599999999999999999754 1121 2466776655555555432 2222 2246666665
Q ss_pred CC
Q psy8141 409 FP 410 (480)
Q Consensus 409 ~~ 410 (480)
.+
T Consensus 346 ~~ 347 (391)
T PRK05985 346 LE 347 (391)
T ss_pred Cc
Confidence 54
No 56
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=96.01 E-value=0.041 Score=59.24 Aligned_cols=150 Identities=15% Similarity=0.052 Sum_probs=89.4
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh--h-------c-ccccccccccccccchhhh
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF--M-------M-AENISHGLLLRKAPVLQYL 256 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~--l-------~-a~RIgHG~~l~~~~~~~~~ 256 (480)
.++.........| ++.|+.. ..||......+...+++ . + ..+|.|+..
T Consensus 292 ~~~e~l~~~~~~a---------~~~g~~v---~~Ha~gd~~i~~~l~~~~~~~~~~g~~~~r~~i~H~~~---------- 349 (479)
T cd01300 292 ISPEELEELVRAA---------DEAGLQV---AIHAIGDRAVDTVLDALEAALKDNPRADHRHRIEHAQL---------- 349 (479)
T ss_pred CCHHHHHHHHHHH---------HHCCCCE---EEEEecHHHHHHHHHHHHHHHHhcCCCCCCceeeeccc----------
Confidence 3566777777777 8888765 99997543444444443 1 1 245666655
Q ss_pred hhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCC
Q psy8141 257 YYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSP 336 (480)
Q Consensus 257 ~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (480)
+ ++....++...+|.+++||.++...+.. .... ..+.
T Consensus 350 ---------------------------~--~~~~~~~l~~~gv~~~~~P~~~~~~~~~-----~~~~-~lg~-------- 386 (479)
T cd01300 350 ---------------------------V--SPDDIPRFAKLGVIASVQPNHLYSDGDA-----AEDR-RLGE-------- 386 (479)
T ss_pred ---------------------------C--CHHHHHHHHHcCCceEeCcccccCchHH-----HHHh-cccH--------
Confidence 2 3445556777899999999987543210 0000 0000
Q ss_pred CCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHH------------HcCCCHHHHHHH-HHHH
Q psy8141 337 LSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQ------------VWKLSSCDMCEL-ARNS 403 (480)
Q Consensus 337 ~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~------------~~~Ls~~Dl~eL-arNS 403 (480)
...-.-.|++.+++.|++|+++||.|... . .|+ ++...+.. ..+++..+..++ +.|+
T Consensus 387 ------~~~~~~~p~~~~~~~Gv~v~lGSD~~~~~-~--~p~-~~~~~av~~~~~~~~~~~~~~~~ls~~~al~~~T~~~ 456 (479)
T cd01300 387 ------ERAKRSYPFRSLLDAGVPVALGSDAPVAP-P--DPL-LGIWAAVTRKTPGGGVLGNPEERLSLEEALRAYTIGA 456 (479)
T ss_pred ------HHHhcCchHHHHHHCCCeeeccCCCCCCC-C--CHH-HHHHHHheeeCCCCCCCCCccccCCHHHHHHHHHHHH
Confidence 00012369999999999999999998642 2 244 34333332 235677776554 4788
Q ss_pred HHHcCCCh
Q psy8141 404 VLMSGFPH 411 (480)
Q Consensus 404 v~~S~~~~ 411 (480)
....+.++
T Consensus 457 A~~lg~e~ 464 (479)
T cd01300 457 AYAIGEED 464 (479)
T ss_pred HHHhcccc
Confidence 77776543
No 57
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=95.99 E-value=0.041 Score=57.40 Aligned_cols=90 Identities=18% Similarity=0.133 Sum_probs=58.9
Q ss_pred HHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCC-CcEEEcCCCc
Q psy8141 290 LQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARG-LVVSLSTDDP 368 (480)
Q Consensus 290 L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~G-l~VsLsTDDP 368 (480)
+.......++++.+||..|...... .. .-.-.|...+.+.| ++|+++||.|
T Consensus 230 ~~~~la~~gv~v~~~P~~~~~~~~~---------------------------~~-~~~~~~~~~l~~aGGv~valgsD~~ 281 (359)
T cd01309 230 LADELAKHGIPVIYGPTLTLPKKVE---------------------------EV-NDAIDTNAYLLKKGGVAFAISSDHP 281 (359)
T ss_pred HHHHHHHcCCCEEECccccccccHH---------------------------Hh-hcchhhHHHHHHcCCceEEEECCCC
Confidence 3345566899999999987532110 00 01225788999998 9999999998
Q ss_pred cCcCCCCcChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCCh
Q psy8141 369 LQFHFTKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMSGFPH 411 (480)
Q Consensus 369 l~f~~T~epL~eEY~~aa~~~~Ls~~Dl~e-LarNSv~~S~~~~ 411 (480)
.... ..+..+...+. .++++..+... +..|+...-+.++
T Consensus 282 ~~~~---~~l~~~~~~a~-~~gl~~~~al~~~T~n~A~~lg~~~ 321 (359)
T cd01309 282 VLNI---RNLNLEAAKAV-KYGLSYEEALKAITINPAKILGIED 321 (359)
T ss_pred Cccc---hhHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 6322 23555554443 47899888655 5578877776554
No 58
>KOG3968|consensus
Probab=95.64 E-value=0.23 Score=52.90 Aligned_cols=80 Identities=24% Similarity=0.188 Sum_probs=58.8
Q ss_pred HHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcC
Q psy8141 293 LYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFH 372 (480)
Q Consensus 293 l~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~ 372 (480)
++..++-.+..||+||..|+.+ --|+++|++.|+.|-|+||=-.
T Consensus 289 ~l~k~g~svshCP~Sn~~L~sG---------------------------------~~~vr~lL~~~v~VgLGtDv~~--- 332 (439)
T KOG3968|consen 289 LLAKRGCSVSHCPTSNSILGSG---------------------------------IPRVRELLDIGVIVGLGTDVSG--- 332 (439)
T ss_pred HHHhcCCceEECCcchhhhccC---------------------------------CccHHHHHhcCceEeecCCccc---
Confidence 4566799999999999999764 2589999999999999999765
Q ss_pred CCCcChHHHHHHHHHH----------cCCCHHHHHHHHH-HHHHHcCCCh
Q psy8141 373 FTKEPLMEEYSIAAQV----------WKLSSCDMCELAR-NSVLMSGFPH 411 (480)
Q Consensus 373 ~T~epL~eEY~~aa~~----------~~Ls~~Dl~eLar-NSv~~S~~~~ 411 (480)
. .+.++|..|+.. .+|+..++..+|- |+..+-+.++
T Consensus 333 ~---s~l~a~r~A~~~s~hL~~~~~~~~Ls~~e~L~lATi~GA~aLg~d~ 379 (439)
T KOG3968|consen 333 C---SILNALRQAMPMSMHLACVLDVMKLSMEEALYLATIGGAKALGRDD 379 (439)
T ss_pred c---ccHHHHHHHHHHHHHHHhccCcccCCHHHHHHHHhccchhhccCCC
Confidence 3 255666555432 5677777766664 6666555444
No 59
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=95.32 E-value=0.0026 Score=66.34 Aligned_cols=146 Identities=18% Similarity=0.097 Sum_probs=89.1
Q ss_pred CCccccccccCCccccchhhhcCCCCCCCCccccccccccCC----HH-HHHHH----H-HHHHHHHHHCCceEEEEEEe
Q psy8141 7 LPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKT----IS-DLSNQ----K-SEVAADLEESKYQNAELRLS 76 (480)
Q Consensus 7 lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t----~~-~la~l----~-~~vi~~l~~~~v~y~Elr~s 76 (480)
++..++..|+-+..+|+.... +..+........+..+ ..+ ++ ++.++ . ...++++.+..|+-+++
T Consensus 2 ~~~~~~~~~~pkaelH~HL~g-~l~p~~v~~la~r~gi-~~~~~~~~~~~~~~~~~~~~~~~~l~~fl~~~y~~~~v--- 76 (345)
T COG1816 2 MDILELIRHLPKAELHRHLEG-SLRPELVLELARRYGI-ALPPAEFDETILEELRAEYNKFNDLQEFLEKYYRGASV--- 76 (345)
T ss_pred cchHHHHhhchhhHhhhcccC-CcCHHHHHHHHHHhCc-cCCcccccchhHHHHHHHHhccccHHHHHHHHHHHHHh---
Confidence 355677777777777766665 4444443321111221 112 11 22222 2 23445555555544433
Q ss_pred ccCCChhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCcee
Q psy8141 77 IYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVI 156 (480)
Q Consensus 77 ~~~~~~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~Vv 156 (480)
..+.++|.+++.|..++...+.+++|.++++| |........+++|.+.+..+|+|+.. ++.-++.+--...+..
T Consensus 77 --~~~~~~~~~la~~~~~~~~~~~~vy~Ei~f~p-~~~t~~~l~~~~~~e~~~~~~~~~~~---~~gi~s~li~~~~r~~ 150 (345)
T COG1816 77 --LRTEEDFYRLAYEYLEDAAADNVVYAEIRFDP-YLHTKRGLSVDTVVEGLIAGFRPAER---DFGIHSKLIVCLLRHL 150 (345)
T ss_pred --hccHHHHHHHHHHHHHHHHhcCCeEEEEEeCc-chhhhccCCHHHHHHHHHHHHHHHhh---ccCCccceEEEEEeec
Confidence 33678899999999999999999999999999 77766667889999999999999833 2333333332333444
Q ss_pred eEeeccC
Q psy8141 157 GFDSVDD 163 (480)
Q Consensus 157 GfDl~gd 163 (480)
|++.+.+
T Consensus 151 ~~e~~~~ 157 (345)
T COG1816 151 GFESADE 157 (345)
T ss_pred CHHHHHH
Confidence 5555443
No 60
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.50 E-value=0.34 Score=51.79 Aligned_cols=62 Identities=16% Similarity=0.226 Sum_probs=52.2
Q ss_pred CCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHH-HHHHHHHHHHHcCCChH
Q psy8141 348 RNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCD-MCELARNSVLMSGFPHG 412 (480)
Q Consensus 348 ~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~D-l~eLarNSv~~S~~~~~ 412 (480)
..|+..+.+.|++|+|+||.+....+ ..+.-+...+++.+ ++.+| |.-...|+.++-+.++.
T Consensus 296 ~~~~~~l~~~GV~vai~TD~~~~~~~--~~l~~~m~l~~~~g-mtp~EaL~a~T~naA~alG~~~~ 358 (406)
T COG1228 296 YKPARKLIDAGVKVAIGTDHNPGTSH--GSLALEMALAVRLG-MTPEEALKAATINAAKALGLADK 358 (406)
T ss_pred chhHHHHHHCCCEEEEEcCCCCCchh--hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCccc
Confidence 46799999999999999999987632 25888999999987 99998 67788999999887743
No 61
>PRK06846 putative deaminase; Validated
Probab=91.59 E-value=1.6 Score=46.17 Aligned_cols=45 Identities=27% Similarity=0.468 Sum_probs=35.7
Q ss_pred CchHHHHHCCCcEEEcCCCcc---C-cCCCCcChHHHHHHHHHHcCCCHHH
Q psy8141 349 NPLPEYLARGLVVSLSTDDPL---Q-FHFTKEPLMEEYSIAAQVWKLSSCD 395 (480)
Q Consensus 349 hP~~~l~~~Gl~VsLsTDDPl---~-f~~T~epL~eEY~~aa~~~~Ls~~D 395 (480)
-|++.|.+.|++|+++||.|. . ++. ..|.+|...++...+++..+
T Consensus 294 ~p~~~l~~~Gv~v~lGtD~~~~~~~p~~~--~d~~~~~~~~~~~~~~~~~~ 342 (410)
T PRK06846 294 MPIPLLHDKGVKVSLGTDSVIDHWSPFGT--GDMLEKANLLAELYRWSDER 342 (410)
T ss_pred CCHHHHHhCCCeEEEecCCCCCCCcCCCC--CCHHHHHHHHHHHhcCCCHH
Confidence 699999999999999999763 1 222 25899999998887777665
No 62
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=88.65 E-value=6.1 Score=41.15 Aligned_cols=56 Identities=23% Similarity=0.169 Sum_probs=40.1
Q ss_pred CchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 349 NPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 349 hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
-|+..+++.|++++|+||.... . .+.-.+ .++...+++..+..++ +.|....-+.+
T Consensus 237 ~~~~~ll~~Gv~~al~SD~~p~-s----ll~~~~-~la~~~gl~l~eAl~~aT~nPA~~lGl~ 293 (325)
T cd01306 237 VSARELAAHGLLDILSSDYVPA-S----LLHAAF-RLADLGGWSLPEAVALVSANPARAVGLT 293 (325)
T ss_pred HhHHHHHHCCCeEEEEcCCCcH-h----HHHHHH-HHHHHcCCCHHHHHHHHhHHHHHHcCCC
Confidence 4789999999999999999421 1 133333 3444568999997664 55888888875
No 63
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=82.45 E-value=4.3 Score=42.25 Aligned_cols=146 Identities=19% Similarity=0.157 Sum_probs=81.6
Q ss_pred HHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh--hccc-ccccccccccccchhhhhhhhcccchhhh
Q psy8141 192 YYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF--MMAE-NISHGLLLRKAPVLQYLYYLAQIGTIQHL 268 (480)
Q Consensus 192 f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~--l~a~-RIgHG~~l~~~~~~~~~~~~~~~g~~~~~ 268 (480)
+......| +++|+.. +.||--......+.+++ .... ||.|+-.
T Consensus 227 l~~~v~~a---------~~~g~~v---~vHa~gd~a~~~~l~a~~~~~~~~~i~h~~~---------------------- 272 (404)
T PF07969_consen 227 LEELVRAA---------REAGLQV---AVHAIGDRAIDEALDAIEAARARGRIEHAEL---------------------- 272 (404)
T ss_dssp HHHHHHHH---------HHCT-EE---EEEEESHHHHHHHHHHHHHHTCCHEEEEHCB----------------------
T ss_pred HHHHHHHH---------HhcCCee---EEEEcCCchHHhHHHHHHhhcccceeecccc----------------------
Confidence 45555555 7788776 99994444456666676 4444 7777765
Q ss_pred hhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccC
Q psy8141 269 VCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHR 348 (480)
Q Consensus 269 ~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~ 348 (480)
-.+.....+...++...+.| +. +..... ....+. .+. ...-..
T Consensus 273 -----------------~~~~~~~~~~~l~~~~~~~p--~~-~~~~~~-~~~~~~--~~~--------------~~~~~~ 315 (404)
T PF07969_consen 273 -----------------IDPDDIERMAELGVTASVQP--HF-LFSWGG-EWYEER--LGP--------------ERARRI 315 (404)
T ss_dssp -----------------CCHHHHHHHHHHTTEEEECC--TH-HHHETE-ETHHHH--HHH--------------HCGGGB
T ss_pred -----------------CCHHHHHHHHHhCCccccCh--hH-hhhccc-hhhhhh--hhh--------------HHHHHH
Confidence 24555556677888999988 11 100000 000000 000 011123
Q ss_pred CchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHH-HHH------------cCCCHHH-HHHHHHHHHHHcCCCh
Q psy8141 349 NPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIA-AQV------------WKLSSCD-MCELARNSVLMSGFPH 411 (480)
Q Consensus 349 hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~a-a~~------------~~Ls~~D-l~eLarNSv~~S~~~~ 411 (480)
.|+..+++.|++|+++||.|.... .|+..=+... .+. ..+|..+ |.-+..|+....+.++
T Consensus 316 ~~~~~~~~~Gv~v~~gsD~p~~~~---~P~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~ 389 (404)
T PF07969_consen 316 YPIRSLLDAGVRVALGSDAPVSPP---NPFRGIWAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLED 389 (404)
T ss_dssp THHHHHHHCTTEEEE--TTTTSSC---CHHHHHHHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TT
T ss_pred hHHHHHHhccCceecCcCCccccc---CcchhhhhhhccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCC
Confidence 799999999999999999998222 3662222211 111 3466666 6777778888777554
No 64
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=78.79 E-value=27 Score=36.85 Aligned_cols=57 Identities=19% Similarity=0.081 Sum_probs=40.0
Q ss_pred CchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHH-HHHHHHHHHcCCCh
Q psy8141 349 NPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMC-ELARNSVLMSGFPH 411 (480)
Q Consensus 349 hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~-eLarNSv~~S~~~~ 411 (480)
-++..+++.|++++|+||..- . .+...-..++...+++..+.. -.+.|+.+.-+.++
T Consensus 288 ~~~~~~~~~Gv~~~lgSD~~p---~---~~~~~~~~~~~~~gls~~~al~~~T~npA~~lgl~~ 345 (383)
T PRK15446 288 VSALDLAAAGLLDILSSDYYP---A---SLLDAAFRLADDGGLDLPQAVALVTANPARAAGLDD 345 (383)
T ss_pred HhHHHHHHCCCcEEEEcCCCh---h---hHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHcCCCC
Confidence 578899999999999999721 1 133333344556789998865 45568888877753
No 65
>PF08187 Tetradecapep: Myoactive tetradecapeptides family; InterPro: IPR012619 This entry consists of myoactive tetradecapeptides that are isolated from the gut of Earthworms, Eisenia foetida (Common brandling worm) and Pheretima vittata (Earthworm). These peptides were termed ETP and PTP respectively. Both peptides showed a potent excitatory action on spontaneous contractions of the anterior gut. These peptides show similarity to Molluscan tetradecapeptides and Arthropodan tridecapeptides [].; GO: 0005184 neuropeptide hormone activity, 0007218 neuropeptide signaling pathway, 0005576 extracellular region
Probab=69.39 E-value=1.6 Score=24.22 Aligned_cols=9 Identities=56% Similarity=0.918 Sum_probs=7.4
Q ss_pred ccccccccc
Q psy8141 237 MAENISHGL 245 (480)
Q Consensus 237 ~a~RIgHG~ 245 (480)
.|+||+||+
T Consensus 6 ~adrishgf 14 (14)
T PF08187_consen 6 SADRISHGF 14 (14)
T ss_pred chhhhhcCC
Confidence 478999995
No 66
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=62.10 E-value=59 Score=36.34 Aligned_cols=62 Identities=16% Similarity=0.284 Sum_probs=46.3
Q ss_pred ccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHH----------cCCCHHH-HHHHHHHHHHHcCCC
Q psy8141 346 YHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV----------WKLSSCD-MCELARNSVLMSGFP 410 (480)
Q Consensus 346 y~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~----------~~Ls~~D-l~eLarNSv~~S~~~ 410 (480)
....||..|++.|++|+.+||.|. .+-+|+..=|+..... ..|+..+ |+-..+||..++|.+
T Consensus 415 ~~~~p~~~ll~~G~~la~gSD~Pv---~~~dP~~~i~~AVtr~~~~g~~~~~~~~L~~~eAL~~yT~~~A~a~~~e 487 (535)
T COG1574 415 SRSYPFRSLLKAGVPLAGGSDAPV---EPYDPWLGIYAAVTRKTPGGRVLGPEERLTREEALRAYTEGGAYASGAE 487 (535)
T ss_pred hccCcHHHHHHCCCeEeccCCCCC---CCCChHHHHHHHHcCCCCCCCCCccccccCHHHHHHHHhhhhHHhhhcc
Confidence 456799999999999999999999 3335776665544411 1577766 677788999988863
No 67
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=58.15 E-value=1.6e+02 Score=30.78 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=37.7
Q ss_pred HHHHHCCC-cEEEcCCCccCcCC-CC-cChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 352 PEYLARGL-VVSLSTDDPLQFHF-TK-EPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 352 ~~l~~~Gl-~VsLsTDDPl~f~~-T~-epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
.++++.|+ +++|+||++.-... .. ..|......+. ..+++..++.++ +.|+...-+.+
T Consensus 260 ~~~l~~G~~~~~lgTD~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~at~~~a~~~g~~ 321 (379)
T PRK12394 260 RRAIANGFLPDIISSDLSTITKLAWPVYSLPWVLSKYL-ALGMALEDVINACTHTPAVLMGMA 321 (379)
T ss_pred HHHHHCCCCceEEECCCCCCCcccCccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHhCCC
Confidence 38899996 99999999873211 10 12333333333 358999998766 56887777764
No 68
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=55.52 E-value=26 Score=33.43 Aligned_cols=61 Identities=23% Similarity=0.188 Sum_probs=41.6
Q ss_pred CchHHHHHCCCcEEEcCCCccCcC-CCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 349 NPLPEYLARGLVVSLSTDDPLQFH-FTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 349 hP~~~l~~~Gl~VsLsTDDPl~f~-~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
.+...+++.|++|.|+||.+.... .+ ..+..+....+..++++.++..++ +.|..+.-+++
T Consensus 227 ~~~~~l~~~Gv~~~l~sD~~~~~~~~~-~~~~~~~~~~~~~~gl~~~~al~~~T~~pA~~lgl~ 289 (304)
T PF13147_consen 227 AALRELLEAGVPVALGSDHAPSSTEGS-GDLLHEAMRLAVRAGLSPEEALRAATSNPARILGLD 289 (304)
T ss_dssp HHHHHHHHTTSSEEEEE-BBTTTTTCT-TTHHHHHHHHHHHTSSTHHHHHHHHTHHHHHHTTBT
T ss_pred HHHHHHHhCCCeEEEEcCCcccccccc-cccchhhhhHHhhcCCCHHHHHHHHHHHHHHHhCCC
Confidence 577899999999999999998532 11 235566666666699999886544 45666555543
No 69
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=54.57 E-value=1e+02 Score=32.52 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=40.5
Q ss_pred CchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCC
Q psy8141 349 NPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMSGFP 410 (480)
Q Consensus 349 hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~e-LarNSv~~S~~~ 410 (480)
-++..+++.|+.++++||+.. +. .+...+..+....+++..+..+ .+.|..+..+.+
T Consensus 283 ~~l~~~~~~G~~~~l~SD~~p--~~---~l~~~~~~~~~~~gl~~~~al~~~T~npA~~lgl~ 340 (376)
T TIGR02318 283 LSARELAHEGLLDVLASDYVP--AS---LLLAAFQLADDVEGIPLPQAVKMVTKNPARAVGLS 340 (376)
T ss_pred HHHHHHHHCCCcEEEEcCCCc--HH---HHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHcCCC
Confidence 478899999999999999932 11 2444444444435788888765 556888888875
No 70
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=47.06 E-value=2.6e+02 Score=26.63 Aligned_cols=55 Identities=13% Similarity=0.097 Sum_probs=33.0
Q ss_pred hHHHHHCC--CcEEEcCCCccCc----CC---CCcChHHHHHHHHHHcCCCHHHHHHHH-HHHHH
Q psy8141 351 LPEYLARG--LVVSLSTDDPLQF----HF---TKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVL 405 (480)
Q Consensus 351 ~~~l~~~G--l~VsLsTDDPl~f----~~---T~epL~eEY~~aa~~~~Ls~~Dl~eLa-rNSv~ 405 (480)
+..+++.+ =++.++||.|.+. .. ....+..-+..+++..|++.+++.++. +|+.+
T Consensus 184 ~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~~i~~~~~~~a~~~g~~~~~~~~~~~~N~~~ 248 (252)
T TIGR00010 184 LREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYTVEAIAEIKGMDVEELAQITTKNAKR 248 (252)
T ss_pred HHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCChhHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 33444443 2799999998532 10 111233335556667799999998866 46554
No 71
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=41.49 E-value=2.9e+02 Score=27.37 Aligned_cols=52 Identities=8% Similarity=0.050 Sum_probs=36.8
Q ss_pred chHHHHHCCC--cEEEcCCCccCcCC----C---CcChHHHHHHHHHHcCCCHHHHHHHHH
Q psy8141 350 PLPEYLARGL--VVSLSTDDPLQFHF----T---KEPLMEEYSIAAQVWKLSSCDMCELAR 401 (480)
Q Consensus 350 P~~~l~~~Gl--~VsLsTDDPl~f~~----T---~epL~eEY~~aa~~~~Ls~~Dl~eLar 401 (480)
-+.++++.|. ++.|+||.|-.... . ..-+...+...++..+++.+++.++..
T Consensus 226 ~l~~~~~~~~~d~ill~TD~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~i~~~~~ 286 (293)
T cd00530 226 AVKALIDEGYGDRLLLSHDVFRKSYLEKRYGGHGYDYILTRFIPRLRERGVTEEQLDTILV 286 (293)
T ss_pred HHHHHHHCCCcCCEEEeCCcCchhhhhhccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3667788887 88999999875321 1 112355666677788999999888765
No 72
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=40.34 E-value=3.3e+02 Score=25.85 Aligned_cols=55 Identities=18% Similarity=0.106 Sum_probs=31.3
Q ss_pred hHHHHHCC--CcEEEcCCCccCcCC-------CCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHH
Q psy8141 351 LPEYLARG--LVVSLSTDDPLQFHF-------TKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVL 405 (480)
Q Consensus 351 ~~~l~~~G--l~VsLsTDDPl~f~~-------T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~ 405 (480)
+.++.+.+ -++.++||.|-.... ....+..=+..++...+++.+++.++ ..|+.+
T Consensus 184 ~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la~~~gl~~e~~~~~~~~N~~~ 248 (251)
T cd01310 184 LREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIAELKGISVEEVAEVTTENAKR 248 (251)
T ss_pred HHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 34444444 279999998864211 10112333444556689999998774 445543
No 73
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=30.58 E-value=1.9e+02 Score=30.28 Aligned_cols=157 Identities=15% Similarity=0.100 Sum_probs=86.2
Q ss_pred HHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchhhhhhh-chhhhhccccccccC
Q psy8141 209 RARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCG-FMMAENISHGLLLRK 286 (480)
Q Consensus 209 ~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~-~l~~~~~~~~~~l~~ 286 (480)
+++|+.. -.-|..- ..+.+.+|+ .|+++|.|..+... + +.--+.|.+...+.. -+.|+.|+||.-+
T Consensus 182 ~~~gi~v--~~GH~~a--~~~~~~~a~~~G~~~~tH~~n~m~-~-----~~~r~~~~~~a~l~~~~~~~~li~dg~Hv-- 249 (374)
T cd00854 182 VERGIIV--SIGHSDA--TYEQAVAAFEAGATHVTHLFNAMS-P-----LHHREPGVVGAALSDDDVYAELIADGIHV-- 249 (374)
T ss_pred HHCCeEE--EeeCCcC--CHHHHHHHHHcCCCeeeECCCCCC-C-----cCCCCCcHHHHhhcCCCCeEEEEcCCCcC--
Confidence 6677643 1244431 245678888 89999999986321 1 112233433333332 2345566665432
Q ss_pred ChHHHHH-HHHcc-CeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHH--HHCCCcEE
Q psy8141 287 APVLQYL-YYLAQ-IGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEY--LARGLVVS 362 (480)
Q Consensus 287 ~p~L~yl-~~l~q-I~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l--~~~Gl~Vs 362 (480)
+|....+ ++.++ =.+.+||-||..+++. ...| |+... ...+-.+.
T Consensus 250 ~~~~~~~~~r~~g~~~~~lvtD~~~~~G~~----------------------------~g~y---~~~~~~~~~~~~~~~ 298 (374)
T cd00854 250 HPAAVRLAYRAKGADKIVLVTDAMAAAGLP----------------------------DGEY---ELGGQTVTVKDGVAR 298 (374)
T ss_pred CHHHHHHHHHhcCCCcEEEEeccccccCCC----------------------------CCeE---EECCEEEEEECCEEE
Confidence 4544434 44443 4577888888876542 0011 11110 01233455
Q ss_pred EcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 363 LSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 363 LsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
+.++.-.-... +|.++...+.+..+++..+...++ .|.....+.++
T Consensus 299 ~~~g~laG~~~---~l~~~~~~l~~~~~l~~~~al~~aT~npA~~lg~~~ 345 (374)
T cd00854 299 LADGTLAGSTL---TMDQAVRNMVKWGGCPLEEAVRMASLNPAKLLGLDD 345 (374)
T ss_pred cCCCCeeehHh---hHHHHHHHHHHhhCCCHHHHHHHHhHHHHHHcCCCC
Confidence 55443222223 588999888888889999987654 58888777664
No 74
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=28.88 E-value=6.5e+02 Score=26.76 Aligned_cols=52 Identities=17% Similarity=-0.007 Sum_probs=33.1
Q ss_pred CCCcEEEcCCCccCcCCC-CcChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCC
Q psy8141 357 RGLVVSLSTDDPLQFHFT-KEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGF 409 (480)
Q Consensus 357 ~Gl~VsLsTDDPl~f~~T-~epL~eEY~~aa~~~~Ls~~Dl~eLa-rNSv~~S~~ 409 (480)
.|.+++++||+|...... +.-+..... .+...+++..+..+++ .|+...-+.
T Consensus 201 ~~~~i~l~TD~~~~~~~~~~g~~~~v~r-~a~~~g~s~~eal~~aT~n~A~~~gl 254 (422)
T cd01295 201 NFRRFMFCTDDVHPDDLLSEGHLDYIVR-RAIEAGIPPEDAIQMATINPAECYGL 254 (422)
T ss_pred cCCeEEEEcCCCCchhhhhcchHHHHHH-HHHHcCCCHHHHHHHHhHHHHHHcCC
Confidence 589999999998422110 011333333 3345799999987755 688887765
No 75
>TIGR03643 conserved hypothetical protein TIGR03643. This model describes an uncharacterized bacterial protein family. Members average about 90 amino acids in length with several well-conserved uncommon amino acids (Trp, Met). The majority of species are marine bacteria. Few species have more than one copy, but Vibrio cholerae El Tor N16961 has three identical copies.
Probab=28.73 E-value=47 Score=27.21 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=28.6
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHH
Q psy8141 382 YSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQ 415 (480)
Q Consensus 382 Y~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~ 415 (480)
|..+...|||+..|+.+|.|+.+..+.|.-+.|+
T Consensus 16 FeaI~~~fGL~E~eVi~lMR~~lk~~Sfk~WRkR 49 (72)
T TIGR03643 16 FEAIEQQFGLSEKEVIKLMRQNLKPSSFKLWRKR 49 (72)
T ss_pred HHHHHHHHCCCHHHHHHHHHhhcChhHHHHHHHH
Confidence 4556677999999999999999999988877654
No 76
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=26.35 E-value=50 Score=32.84 Aligned_cols=97 Identities=23% Similarity=0.220 Sum_probs=53.6
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccc-cCCchHHHHHC-CCcEEEcC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNY-HRNPLPEYLAR-GLVVSLST 365 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy-~~hP~~~l~~~-Gl~VsLsT 365 (480)
+.-..+....++.+..||++|....... .....++-.... ...-. .-.+...++.. |++ |.|
T Consensus 217 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~~--lgt 280 (333)
T PF01979_consen 217 DEEIELLKETGIGIIHCPISNDSAPHKP-------------GKAIMMDGTAEG-IYGLGSGGAPLFRMLDKMGVN--LGT 280 (333)
T ss_dssp HHHHHHHHHHTHEEEEEHHHHHHHHHHT-------------THHSETTBSBTS-BSCTTHHHHHHHHHHHCTTHE--ETT
T ss_pred HHHhhhhhccCCccccccchhhhhcccc-------------ccccccchhccc-cccccccccchhhhhhhcccc--ccc
Confidence 3333455778999999999998721100 000000000000 00001 11346667777 988 999
Q ss_pred CCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 366 DDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 366 DDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
| +.. +|+..+.+.. ++..++.++ +.|+.++-++++
T Consensus 281 D-----g~~-----~~l~~~~~~~-~~~~~~l~~aT~n~Ak~lg~~~ 316 (333)
T PF01979_consen 281 D-----GVA-----EELKLFVRLG-ISPEEALKMATINPAKILGLDD 316 (333)
T ss_dssp C-----TTC-----HHHHHHHHHH-SHHHHHHHHHTHHHHHHTTSTT
T ss_pred c-----ccc-----cccccccccc-ccccccccccchhHHHHcCCCC
Confidence 9 221 7777776664 888886544 568888777643
No 77
>KOG1321|consensus
Probab=24.94 E-value=1.4e+02 Score=31.44 Aligned_cols=69 Identities=25% Similarity=0.397 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHCCceEEE-------EEEeccCCChhh-HHHHHHHHHHcccccceeeeecccccccChhhhHHHHh
Q psy8141 51 DLSNQKSEVAADLEESKYQNAE-------LRLSIYGKSEDE-WDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLIN 122 (480)
Q Consensus 51 ~la~l~~~vi~~l~~~~v~y~E-------lr~s~~~~~~~e-~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~ 122 (480)
|..-++.+.++++++||+.-+= .+.+-.|.+-++ |..+ +..-....+.|-+ |+|=+.. .+.++
T Consensus 137 Y~~PlTEea~~qikkd~v~r~VafsqYPQyS~sTsGSSln~l~r~~-----r~~~~~~~~~wsi-IdrW~t~---~glIk 207 (395)
T KOG1321|consen 137 YAHPLTEEALEQIKKDGVTRAVAFSQYPQYSCSTSGSSLNELWRQF-----REDGYERDIKWSI-IDRWPTR---EGLIK 207 (395)
T ss_pred ecCcccHHHHHHHHhcCceeEEeeccCCceeeecCcccHHHHHHHH-----HhcCcccCCceEe-ecccccc---chHHH
Confidence 5555788999999999986543 333333444445 3333 2344556677866 5665544 46777
Q ss_pred hHHHHH
Q psy8141 123 NFQEIL 128 (480)
Q Consensus 123 ~f~~~L 128 (480)
.|.+-+
T Consensus 208 afA~~I 213 (395)
T KOG1321|consen 208 AFAENI 213 (395)
T ss_pred HHHHHH
Confidence 776543
No 78
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=24.81 E-value=5.2e+02 Score=29.25 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=37.8
Q ss_pred HHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHc---CCCHHH------------HHHHHHHHHHHcCCChH
Q psy8141 353 EYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVW---KLSSCD------------MCELARNSVLMSGFPHG 412 (480)
Q Consensus 353 ~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~---~Ls~~D------------l~eLarNSv~~S~~~~~ 412 (480)
-+++.|..++++||.|.+-.-. +....-++.|.+.- |--..| |.....|+..+.+.++.
T Consensus 348 ~l~d~Ga~~~~~SD~p~~~~~~-~~~~r~~q~A~~r~~~~G~~~~d~~~~~n~ri~~~l~~~T~npA~alG~~~~ 421 (568)
T PRK13207 348 ILHDLGAISMISSDSQAMGRVG-EVIIRTWQTAHKMKVQRGPLPGDSGRNDNFRVKRYIAKYTINPAIAHGISHE 421 (568)
T ss_pred hhhhCCCEEEecCCcccccccc-cchhHHHHHHHHHHHccCCCCcccccCccchHHHHHHHHhHHHHHHcCCCcC
Confidence 4789999999999999874311 12334555554431 221111 77788899998887753
No 79
>PF10985 DUF2805: Protein of unknown function (DUF2805); InterPro: IPR019882 This entry represents an uncharacterised bacterial protein family. Members average about 90 amino acids in length with several well-conserved uncommon amino acids (Trp, Met). The majority of species are marine bacteria. Few species have more than one copy, but Vibrio cholerae O1 biovar eltor str. N16961 has three identical copies.
Probab=22.74 E-value=71 Score=26.28 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=29.5
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHH
Q psy8141 382 YSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQY 416 (480)
Q Consensus 382 Y~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~ 416 (480)
|..+...|||+..|+.+|.|..+..|.|.-+.|+-
T Consensus 15 FeaI~~qfGl~E~eVi~lMR~~Lk~~sfk~WRkRv 49 (73)
T PF10985_consen 15 FEAIERQFGLSEKEVIKLMRKELKPSSFKLWRKRV 49 (73)
T ss_pred HHHHHHHHCCCHHHHHHHHHhhcChhHHHHHHHHH
Confidence 34566679999999999999999999998887654
No 80
>PF05871 ESCRT-II: ESCRT-II complex subunit; InterPro: IPR008570 This entry represents the vps25 subunit (vacuolar protein sorting-associated protein 25) of the endosome-associated complex ESCRT-II (Endosomal Sorting Complexes Required for Transport protein II). ESCRT (ESCRT-I, -II, -III) complexes orchestrate efficient sorting of ubiquitinated transmembrane receptors to lysosomes via multivesicular bodies (MVBs) []. ESCRT-II recruits the transport machinery for protein sorting at MVB []. In addition, the human ESCRT-II has been shown to form a complex with RNA polymerase II elongation factor ELL in order to exert transcriptional control activity. ESCRT-II transiently associates with the endosomal membrane and thereby initiates the formation of ESCRT-III, a membrane-associated protein complex that functions immediately downstream of ESCRT-II during sorting of MVB cargo. ESCRT-II in turn functions downstream of ESCRT-I, a protein complex that binds to ubiquitinated endosomal cargo []. ESCRT-II is a trilobal complex composed of two copies of vps25, one copy of vps22 and the C-terminal region of vps36. The crystal structure of vps25 revealed two winged-helix domains, the N-terminal domain of vps25 interacting with vps22 and vps35 [].; PDB: 1W7P_B 1U5T_D 1XB4_D 3HTU_E 3CUQ_C 2ZME_D.
Probab=22.54 E-value=1.6e+02 Score=27.04 Aligned_cols=45 Identities=27% Similarity=0.484 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHCCceEEEE------EEeccCCChhhH-HHHHHHHHHcccccc
Q psy8141 54 NQKSEVAADLEESKYQNAEL------RLSIYGKSEDEW-DKLATWAIESNVYSN 100 (480)
Q Consensus 54 ~l~~~vi~~l~~~~v~y~El------r~s~~~~~~~e~-~~la~w~~~~~~~~~ 100 (480)
+.++++++.|.+.| .+|. ++-+|-+++.+| +.+.+|+...+..+.
T Consensus 64 e~~~~Il~~Lv~~g--~aew~~~~~~~~~I~Wrt~~eWa~~I~~Wv~~~G~~gt 115 (139)
T PF05871_consen 64 EFIREILDELVQKG--NAEWIDKSKTRCLIYWRTPEEWADLIYDWVESTGQLGT 115 (139)
T ss_dssp HHHHHHHHHHHCTT--SEEECSTTSCEEEE-SS-HHHHHHHHHHHHHCCTTTTS
T ss_pred HHHHHHHHHHHhcC--CeEEeeCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCCC
Confidence 45677888888887 3555 445677889999 568899887765443
No 81
>COG1904 UxaC Glucuronate isomerase [Carbohydrate transport and metabolism]
Probab=22.26 E-value=54 Score=35.58 Aligned_cols=90 Identities=20% Similarity=0.292 Sum_probs=55.3
Q ss_pred cccCCCccccccccCCccccchhhhcCCCCCCCCccccccccccCCHHHHHHHHHHHHHHHHHCCceEEEEEEeccCCCh
Q psy8141 3 NVASLPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKTISDLSNQKSEVAADLEESKYQNAELRLSIYGKSE 82 (480)
Q Consensus 3 ~~~~lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s~~~~~~ 82 (480)
.+++||+.+-|+|++++-|.+=..| -+ +.+++ |..|-|.-|+.+.- || .|..+++ +.+.
T Consensus 21 ~vkdlPIidpH~Hl~P~~i~en~~F----~d------~t~l~-l~~DHY~wRmmrs~-------GV--~e~~itg-d~sd 79 (463)
T COG1904 21 YVKDLPIIDPHCHLEPQEIAENEAF----PD------PTSLW-LKGDHYKWRMMRSN-------GV--AERLITG-DTSD 79 (463)
T ss_pred hhcCCCeeCCcCCCCHHHHhhcCCC----CC------HHHHh-hcccHHHHHHHHHc-------CC--chhhcCC-CCCh
Confidence 4789999999999999877654444 22 44565 89999999987653 55 7777777 4333
Q ss_pred hhHHHHHHHHHHcccc-c-ceeeee-cccccccChh
Q psy8141 83 DEWDKLATWAIESNVY-S-NNIRWL-IQIPRLYDIF 115 (480)
Q Consensus 83 ~e~~~la~w~~~~~~~-~-~~irwi-v~i~R~~~~~ 115 (480)
.| ++..|+..+..+ | +.--|. ....|.|++.
T Consensus 80 rE--kw~afa~~~~~~~GnP~y~W~hlel~r~FgI~ 113 (463)
T COG1904 80 RE--KWRAFAKTVPLFIGNPLYHWTHLELERVFGIT 113 (463)
T ss_pred HH--HHHHHHHhhhhhcCCcchhhhHHHHhhhcCcc
Confidence 33 334444433333 2 222354 2345556653
No 82
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=21.92 E-value=1.7e+02 Score=31.20 Aligned_cols=61 Identities=18% Similarity=0.148 Sum_probs=42.8
Q ss_pred chHHHHHCCCcE---EEcCCCcc---CcCC----------CCcChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCC
Q psy8141 350 PLPEYLARGLVV---SLSTDDPL---QFHF----------TKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMSGFP 410 (480)
Q Consensus 350 P~~~l~~~Gl~V---sLsTDDPl---~f~~----------T~epL~eEY~~aa~~~~Ls~~Dl~e-LarNSv~~S~~~ 410 (480)
-++++++.|+++ +++||-.. .|.. +-+++..|...+.+..+++.++..+ .+.|....-+.+
T Consensus 267 ~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g~~~~~g~g~~~sl~~~~~~lv~~g~ls~~eal~~~T~npA~~Lgl~ 344 (389)
T TIGR01975 267 GIKKALEAGVPLEKVTFSSDGNGSQPFFDENGELTGLGVGSFETLFEEVREAVKDGDVPLEKALRVITSNVAGVLNLT 344 (389)
T ss_pred HHHHHHHcCCCcceEEEEeCCCCCCCccccccccccCCcCcHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhCCC
Confidence 358899999974 99999754 2211 0014678888888877799998654 566887776654
No 83
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=21.58 E-value=1.9e+02 Score=29.95 Aligned_cols=62 Identities=26% Similarity=0.226 Sum_probs=43.7
Q ss_pred CchHHHHHCCC---cEEEcCCC--cc-Cc---------C-CCCcChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCC
Q psy8141 349 NPLPEYLARGL---VVSLSTDD--PL-QF---------H-FTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFP 410 (480)
Q Consensus 349 hP~~~l~~~Gl---~VsLsTDD--Pl-~f---------~-~T~epL~eEY~~aa~~~~Ls~~Dl~eLa-rNSv~~S~~~ 410 (480)
.++.++++.|+ +|+||||- +- .+ + ..-+.+..+...+.+..+++..++.+++ .|..+.-+.+
T Consensus 265 ~~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g~~~~~g~~~~~~l~~~~~~~~~~~gis~~~~l~~aT~npA~~lg~~ 343 (388)
T PRK10657 265 EALKRALEAGVPLSRVTLSSDGNGSLPKFDEDGNLVGLGVGSVESLLEEVRELVKDEGLPLEDALKPLTSNVARFLKLN 343 (388)
T ss_pred HHHHHHHHcCCChhheEEECCCCCCCceeccCCCEeccCcCchhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCC
Confidence 45779999999 89999993 21 11 1 1113488888888877899999987664 5777766654
No 84
>PRK06361 hypothetical protein; Provisional
Probab=20.10 E-value=2.2e+02 Score=27.09 Aligned_cols=46 Identities=17% Similarity=0.018 Sum_probs=29.4
Q ss_pred HHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHHH
Q psy8141 354 YLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARN 402 (480)
Q Consensus 354 l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarN 402 (480)
..+.|++++++||-=--... .-.++-...++..+++.+|+..+-++
T Consensus 157 a~~~gi~vv~~SDaH~~~d~---~~~~~~~~i~~~~gl~~~~v~~~~~~ 202 (212)
T PRK06361 157 AREAGAPLVINTDTHAPSDL---ITYEFARKVALGAGLTEKELEEALEN 202 (212)
T ss_pred HHHhCCcEEEECCCCCHHHH---HHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 34579999999996521111 01344444555689999998776654
Done!