Query psy8141
Match_columns 480
No_of_seqs 241 out of 1453
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 19:41:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8141.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8141hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a3l_A AMP deaminase, AMPD; at 100.0 1.3E-82 4.3E-87 699.4 24.7 383 5-458 303-690 (701)
2 4gxw_A Adenosine deaminase; am 100.0 2.9E-53 1E-57 440.3 21.1 297 2-419 24-351 (380)
3 3rys_A Adenosine deaminase 1; 100.0 6.7E-49 2.3E-53 402.7 22.9 294 3-421 9-332 (343)
4 3iar_A Adenosine deaminase; pu 100.0 7.8E-48 2.7E-52 398.0 21.7 291 5-421 4-344 (367)
5 3pao_A Adenosine deaminase; st 100.0 1.5E-47 5.1E-52 390.2 13.7 286 2-412 5-320 (326)
6 3lgd_A Adenosine deaminase CEC 100.0 2.8E-43 9.4E-48 376.6 25.2 272 45-463 191-485 (508)
7 2pgf_A Adenosine deaminase; me 100.0 3.1E-41 1.1E-45 348.7 16.7 291 3-420 40-369 (371)
8 3ls9_A Triazine hydrolase; atr 98.7 2E-06 6.8E-11 88.4 22.9 139 187-411 216-379 (456)
9 3h4u_A Amidohydrolase; signatu 98.6 3.2E-07 1.1E-11 95.3 15.5 138 187-410 237-397 (479)
10 4dyk_A Amidohydrolase; adenosi 98.6 5.8E-07 2E-11 92.5 16.9 90 287-411 263-361 (451)
11 4aql_A Guanine deaminase; hydr 98.4 4.4E-05 1.5E-09 80.3 23.3 89 287-411 306-406 (476)
12 4dzh_A Amidohydrolase; adenosi 98.2 0.00018 6.1E-09 75.0 23.6 90 287-411 270-368 (472)
13 3mdu_A N-formimino-L-glutamate 98.2 5E-05 1.7E-09 78.9 18.2 85 287-409 274-374 (453)
14 3lnp_A Amidohydrolase family p 98.2 0.00019 6.5E-09 74.2 22.2 90 287-411 288-386 (468)
15 4f0r_A 5-methylthioadenosine/S 98.1 0.00016 5.4E-09 74.2 20.5 90 287-411 261-359 (447)
16 2q09_A Imidazolonepropionase; 98.1 2.8E-05 9.4E-10 79.3 12.9 140 188-411 221-362 (416)
17 3ooq_A Amidohydrolase; structu 97.8 4.1E-05 1.4E-09 77.8 9.1 128 209-411 217-348 (396)
18 2paj_A Putative cytosine/guani 97.8 0.0013 4.3E-08 68.4 19.3 87 288-410 291-401 (492)
19 3gnh_A L-lysine, L-arginine ca 97.6 5.4E-05 1.8E-09 76.2 6.2 154 187-411 204-360 (403)
20 3feq_A Putative amidohydrolase 97.6 2.4E-05 8.4E-10 79.3 3.3 137 187-411 209-364 (423)
21 2bb0_A Imidazolonepropionase; 97.6 0.00048 1.7E-08 70.1 12.8 140 188-411 228-369 (421)
22 2i9u_A Cytosine/guanine deamin 97.6 0.00039 1.3E-08 71.3 11.8 85 288-408 275-372 (439)
23 2r8c_A Putative amidohydrolase 97.5 7.1E-05 2.4E-09 76.5 5.9 137 187-411 212-367 (426)
24 4f0l_A Amidohydrolase; ssgcid, 97.5 0.0024 8.2E-08 65.8 17.1 85 287-409 283-382 (458)
25 2puz_A Imidazolonepropionase; 97.4 0.0012 4.1E-08 66.9 13.0 140 188-411 233-374 (419)
26 1ra0_A Cytosine deaminase; alp 97.4 0.00035 1.2E-08 71.4 8.6 97 290-410 265-368 (430)
27 2imr_A Hypothetical protein DR 97.3 0.00092 3.2E-08 68.4 10.9 88 287-410 308-398 (420)
28 2qs8_A XAA-Pro dipeptidase; am 97.3 0.00054 1.9E-08 69.6 9.1 153 187-411 213-370 (418)
29 3be7_A Zn-dependent arginine c 97.2 0.00091 3.1E-08 67.5 9.4 153 187-410 203-358 (408)
30 2ood_A BLR3880 protein; PSI-II 97.1 0.0015 5.2E-08 68.1 10.0 88 288-411 279-393 (475)
31 2qt3_A N-isopropylammelide iso 96.8 0.0043 1.5E-07 62.3 10.3 142 188-410 196-354 (403)
32 2vun_A Enamidase; nicotinate d 96.5 0.012 4E-07 58.8 10.9 140 188-409 172-320 (386)
33 3v7p_A Amidohydrolase family p 96.3 0.017 5.8E-07 59.4 10.6 87 287-410 262-354 (427)
34 1p1m_A Hypothetical protein TM 96.3 0.0051 1.7E-07 62.1 6.5 61 348-410 261-328 (406)
35 2p9b_A Possible prolidase; pro 96.0 0.025 8.7E-07 58.1 10.0 63 348-411 327-390 (458)
36 3icj_A Uncharacterized metal-d 95.4 0.15 5E-06 54.7 13.7 253 48-410 216-481 (534)
37 2ics_A Adenine deaminase; TIM 88.2 2.1 7.1E-05 42.0 9.9 60 350-410 255-318 (379)
38 2ogj_A Dihydroorotase; TIM bar 86.6 1.9 6.7E-05 43.3 8.8 61 349-411 273-337 (417)
39 1yrr_A N-acetylglucosamine-6-p 80.4 1.8 6.3E-05 42.9 5.5 157 209-411 185-347 (382)
40 2vhl_A N-acetylglucosamine-6-p 68.1 12 0.0004 37.1 7.7 158 209-411 192-355 (396)
41 2y1h_A Putative deoxyribonucle 58.5 1.1E+02 0.0038 28.3 12.3 58 351-408 199-264 (272)
42 1zzm_A Putative deoxyribonucle 56.3 1.2E+02 0.0042 27.8 12.6 55 351-405 190-254 (259)
43 2z00_A Dihydroorotase; zinc bi 51.1 17 0.00057 36.1 5.3 61 350-410 290-366 (426)
44 3hpa_A Amidohydrolase; signatu 43.4 54 0.0019 32.1 7.7 89 287-410 301-397 (479)
45 1o12_A N-acetylglucosamine-6-p 42.1 69 0.0024 31.7 8.3 34 377-410 306-340 (376)
46 3mtw_A L-arginine carboxypepti 39.2 28 0.00097 32.2 4.6 61 348-412 300-361 (403)
47 4ac7_C Urease subunit alpha; h 24.2 43 0.0015 36.1 3.3 61 350-411 347-422 (570)
48 1v77_A PH1877P, hypothetical p 23.7 74 0.0025 29.3 4.5 94 274-398 96-197 (212)
49 1yix_A Deoxyribonuclease YCFH; 23.1 4.2E+02 0.014 23.9 12.2 61 351-411 188-258 (265)
No 1
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=100.00 E-value=1.3e-82 Score=699.42 Aligned_cols=383 Identities=55% Similarity=0.940 Sum_probs=366.6
Q ss_pred cCCCccccccccCCccccchhhhcCCCCCCCCccccccccccCCHH-----HHHHHHHHHHHHHHHCCceEEEEEEeccC
Q psy8141 5 ASLPHSTKIVHEDKKTIADTDKHFKPSDNDSSTDQVAPLWQYKTIS-----DLSNQKSEVAADLEESKYQNAELRLSIYG 79 (480)
Q Consensus 5 ~~lp~~~l~~h~~~~~~~~~~~f~~~~~~~~~~~~l~~~f~l~t~~-----~la~l~~~vi~~l~~~~v~y~Elr~s~~~ 79 (480)
.+|.++.|.+|+++++|++||+| +.+|||.|.+.|+++| ++|++ +|++++++++++++++||+|+|+|++||+
T Consensus 303 ydltvd~L~~~ad~~~F~rFd~F-n~kynp~g~~~LreiF-lktdn~i~~e~l~ri~~evled~a~dgV~Y~ElR~sp~~ 380 (701)
T 2a3l_A 303 YDLNVDLLDVHADKSTFHRFDKF-NLKYNPCGQSRLREIF-LKQDNLIQGRFLGEITKQVFSDLEASKYQMAEYRISIYG 380 (701)
T ss_dssp TTCCSTTCCCCSCSSCCCCCSSS-HHHHCCSSCCHHHHHH-SCSSSTTTTTTHHHHHHHHHHHHTTSSSEEEEEEEECCS
T ss_pred ccccccccccccccchhhhhccc-ccccChhhHHHHHHHH-HHhcccccHHHHHHHHHHHHHHHHHcCCeEEEEEecccc
Confidence 47889999999999999999999 9999999999999999 99886 99999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEe
Q psy8141 80 KSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFD 159 (480)
Q Consensus 80 ~~~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfD 159 (480)
....+|+.+++|+.++...+.++||++|++|.++++.+.+.+.+|+++|++||.|||++|++|++|++++.|++.|||||
T Consensus 381 ~~~~~~~~l~~~v~~~~~~~~~vr~ii~i~R~~~~~~a~~~v~~F~~~l~nIF~PL~e~t~~p~~~~~l~~~~~~VvGfD 460 (701)
T 2a3l_A 381 RKMSEWDQLASWIVNNDLYSENVVWLIQLPRLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFD 460 (701)
T ss_dssp SSSTHHHHHHHHHHTTTCCCSSEEEEEEEECCHHHHTTSSSCSSTHHHHHHHSSHHHHHHHCGGGSTTTHHHHTTEEEEE
T ss_pred CCCCcHHHHHHHHHhcCccCcceEEEEEeecccCHHHhcChHHHHHHHHHhhhhHHHHhhcCcccCHHHHhcCCCEEEEE
Confidence 88889999999999888889999999999999999888888999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHhhccc
Q psy8141 160 SVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMMAE 239 (480)
Q Consensus 160 l~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~l~a~ 239 (480)
++|+|++++. .|....++|.+|+...+|++.||+||+||||++||.+|+++|+++|++++||||+++++++++++|+++
T Consensus 461 L~G~E~~~~~-~~~~~~~pp~~~~~~f~p~~~yy~Yy~yan~~~Ln~ar~~~Gl~~i~~t~HaGE~~~~e~l~~alLg~~ 539 (701)
T 2a3l_A 461 LVDDESKPER-RPTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLRPHSGEAGDIDHLAATFLTCH 539 (701)
T ss_dssp EESCTTSCCC-CCCSSCCCTTTCCSSSCCCHHHHHHHHHHHHHHHHHHHTTTTCCCCEECCCCSSSSCTHHHHHHHHHCS
T ss_pred eecCCCcccc-cccccCCChHHcccccccHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcccccCCCCCHHHHHHHhcCCC
Confidence 9999998754 567788999999999999999999999999999999998899998999999999999999999999999
Q ss_pred ccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCC
Q psy8141 240 NISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNP 319 (480)
Q Consensus 240 RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~ 319 (480)
|||||+. +.++|.|+++++.+||+|++||+||..+.
T Consensus 540 RIgHGv~-------------------------------------l~edp~Li~lla~~~I~vevCP~SN~kl~------- 575 (701)
T 2a3l_A 540 SIAHGIN-------------------------------------LRKSPVLQYLYYLAQIGLAMSPLSNNSLF------- 575 (701)
T ss_dssp SCSCCGG-------------------------------------GGGCHHHHHHHHHHTCCEEECHHHHTTTT-------
T ss_pred eEEEEee-------------------------------------cccCHHHHHHHHHcCCcEEECccchhhhc-------
Confidence 9999999 67899999999999999999999999653
Q ss_pred chHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH
Q psy8141 320 LPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL 399 (480)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL 399 (480)
.++.+||++.|+++|++|+||||||++|++|+.+|++||..|++.++++..|+++|
T Consensus 576 ------------------------~~~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t~~dL~~Ey~~aa~~~~ls~~dl~~l 631 (701)
T 2a3l_A 576 ------------------------LDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEI 631 (701)
T ss_dssp ------------------------CCSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred ------------------------cCchHhHHHHHHHCCCcEEEeCCCccccCCCCcCHHHHHHHHHHHcCCCHHHHHHH
Confidence 35899999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHHHhcccccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHH
Q psy8141 400 ARNSVLMSGFPHGMKQYWLGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFR 458 (480)
Q Consensus 400 arNSv~~S~~~~~~K~~wlg~~~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~~~ 458 (480)
++||+++||+++++|++|++..|.++|+.|||+++||||+||++||++||.+||++|+.
T Consensus 632 a~Ns~~asfl~~~~K~~ll~~~~~~~g~~gn~~~~tnvp~~R~~~R~e~l~~E~~~~~~ 690 (701)
T 2a3l_A 632 ARNSVYQSGFSHALKSHWIGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYL 690 (701)
T ss_dssp HHHHHHHSCCCHHHHHHHSCTTTTBSSGGGCCHHHHCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999987
No 2
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=100.00 E-value=2.9e-53 Score=440.31 Aligned_cols=297 Identities=17% Similarity=0.175 Sum_probs=238.1
Q ss_pred ccccCCCccccccccCCc----cccchhhhcCCC-------------CCCCCccccc---cccccCCHHHHHHHHHHHHH
Q psy8141 2 DNVASLPHSTKIVHEDKK----TIADTDKHFKPS-------------DNDSSTDQVA---PLWQYKTISDLSNQKSEVAA 61 (480)
Q Consensus 2 ~~~~~lp~~~l~~h~~~~----~~~~~~~f~~~~-------------~~~~~~~~l~---~~f~l~t~~~la~l~~~vi~ 61 (480)
+.+++|||++||+|+||+ |+.++.+-.+.. ..+.+..++- ..++++|+++|+++++++++
T Consensus 24 ~Fi~~LPKvELH~HLdGsl~p~tl~~LA~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~t~ed~~r~a~e~~e 103 (380)
T 4gxw_A 24 AFFHALPKVELHCHLLGAVRHDTFVALAQRSGAPIERAEIDAFYARGEKPVGVLHVLRALDRYLLTRPDDLRRIAYEYLE 103 (380)
T ss_dssp HHHHHSCEEECCBBGGGCCCHHHHHHHHHHHTCSCCTTHHHHHHCCCSSCCCSHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHhChhHHhhcCCcCCCCHHHHHHHHHHhCCCCCcccHHHHHHhhhccccHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 357899999999999974 566665542221 1122211111 12258999999999999999
Q ss_pred HHHHCCceEEEEEEeccCCCh------hh-HHHHHHHHH-HcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhh
Q psy8141 62 DLEESKYQNAELRLSIYGKSE------DE-WDKLATWAI-ESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFK 133 (480)
Q Consensus 62 ~l~~~~v~y~Elr~s~~~~~~------~e-~~~la~w~~-~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~ 133 (480)
+++++||+|+|+|++|..+.. .+ .+.+.+.+. ..+.+++.+|||+++.|..++..+...+ +.+
T Consensus 104 d~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~~~e~a~~~~-------~~a-- 174 (380)
T 4gxw_A 104 DAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDPDEAVAIV-------DWM-- 174 (380)
T ss_dssp HHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTSCHHHHHHHH-------HHH--
T ss_pred HHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCHHHHHHHH-------HHH--
Confidence 999999999999999965432 22 234444433 2345789999999999999985443332 221
Q ss_pred hhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCC
Q psy8141 134 PLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDL 213 (480)
Q Consensus 134 pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl 213 (480)
+....+.||||||+|+|. ++||..|...|.+| ++.|+
T Consensus 175 --------------~~~~~~~VvG~dL~g~E~--------------------~~p~~~f~~~f~~a---------r~~Gl 211 (380)
T 4gxw_A 175 --------------KANRADEVAGIGIDYREN--------------------DRPPELFWKAYRDA---------RAAGF 211 (380)
T ss_dssp --------------HHTCCTTBCEEEEESCCT--------------------TCCGGGGHHHHHHH---------HHTTC
T ss_pred --------------HHhCCCCEEEEeecCCCC--------------------CCCHHHHHHHHHHH---------HHcCC
Confidence 123446799999999998 46999999999999 99997
Q ss_pred CCCCcccccCCCCC-hhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHH
Q psy8141 214 NTFVLRPHCGEAGP-IQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVL 290 (480)
Q Consensus 214 ~~~~l~~HaGE~~~-~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L 290 (480)
+. |+||||.++ .+++++|+ |+++|||||++ +.++|.|
T Consensus 212 ~~---t~HAGE~~~p~~~i~~al~~lga~RIgHG~~-------------------------------------~~~d~~L 251 (380)
T 4gxw_A 212 RT---TAHAGEFGMPWRNVETAVDLLHVDRVDHGYT-------------------------------------IVDNPEL 251 (380)
T ss_dssp EE---EEEESCTTCCHHHHHHHHHTSCCSEEEECGG-------------------------------------GGGCHHH
T ss_pred Ce---eeeccccCCchHHHHHHHHHcCCccccccee-------------------------------------eccChHH
Confidence 76 999999885 58999998 89999999999 6789999
Q ss_pred HHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccC
Q psy8141 291 QYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ 370 (480)
Q Consensus 291 ~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~ 370 (480)
+..+..+||||||||+||+.|++- . ....+.+||++.|++.|++|+||||||++
T Consensus 252 ~~~l~~~~I~lEvCP~SN~~l~~v----------------~----------~~~~~~~HP~~~l~~~Gv~vtinTDDp~~ 305 (380)
T 4gxw_A 252 CARYAERGIVFTVVPTNSYYLRTL----------------P----------PDQWAERHPMRKMPGLGLKIHPNTDDPTL 305 (380)
T ss_dssp HHHHHHHTCEEEECTTCHHHHHHS----------------C----------TTTHHHHCGGGGTGGGTCEEEECCBSHHH
T ss_pred HHHHHHhCceeEECCcchhhhccc----------------c----------cccccccChHHHHHHCCCeEEECCCCchh
Confidence 999999999999999999998652 0 01237789999999999999999999999
Q ss_pred cCCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhc
Q psy8141 371 FHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLG 419 (480)
Q Consensus 371 f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg 419 (480)
|++| |++||..+++.|||+.+|+.+|++||+.+||+++++|++|+.
T Consensus 306 f~t~---Ls~Ey~~~~~~~gls~~dl~~l~~nsi~~sF~~~~~K~~l~~ 351 (380)
T 4gxw_A 306 HKVN---PSEAWELMFSHFGFTIADLKQFMLNGIDGAWVDDDTKAAWRA 351 (380)
T ss_dssp HTCC---HHHHHHHHHHTSCCCHHHHHHHHHHHHHHSSSCHHHHHHHHH
T ss_pred hCCC---HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9985 999999999999999999999999999999999999998753
No 3
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=100.00 E-value=6.7e-49 Score=402.68 Aligned_cols=294 Identities=18% Similarity=0.201 Sum_probs=241.6
Q ss_pred cccCCCccccccccCCc----cccchhhhcCCCCCCCCccccccc------------c-----ccCCHHHHHHHHHHHHH
Q psy8141 3 NVASLPHSTKIVHEDKK----TIADTDKHFKPSDNDSSTDQVAPL------------W-----QYKTISDLSNQKSEVAA 61 (480)
Q Consensus 3 ~~~~lp~~~l~~h~~~~----~~~~~~~f~~~~~~~~~~~~l~~~------------f-----~l~t~~~la~l~~~vi~ 61 (480)
.+++|||++||+|++|+ |+.++.+-.+...+..+.+++++. | +++|+++|+++++++++
T Consensus 9 ~~~~lPK~ELH~Hl~Gsl~p~tl~~la~~~~~~lp~~~~~~l~~~~~~~~l~~fl~~f~~~~~vl~~~e~~~~~~~~~l~ 88 (343)
T 3rys_A 9 TSTAPPVAELHLHIEGTLQPELIFALAERNGIELPYEDIEELREKYEFTDLQSFLDLYYANMAVLQTEQDFTDMTRAYLE 88 (343)
T ss_dssp CCSCCCEEECSBBGGGGCCHHHHHHHHHHTTCCCSCSSHHHHHTTCCCSSHHHHHHHHHHHGGGCCSHHHHHHHHHHHHH
T ss_pred hhhcCCceeeEecCccCCCHHHHHHHHHhcCCCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 46899999999999974 666666552222211122222221 1 57899999999999999
Q ss_pred HHHHCCceEEEEEEeccCCChh-----h-HHHHHHHHH-HcccccceeeeecccccccChhhhHHHHhhHHHHHHHHhhh
Q psy8141 62 DLEESKYQNAELRLSIYGKSED-----E-WDKLATWAI-ESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKP 134 (480)
Q Consensus 62 ~l~~~~v~y~Elr~s~~~~~~~-----e-~~~la~w~~-~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~p 134 (480)
+++++||+|+|+|++|+.+... + ++.+.+.+. ..+.+++.+|+|+++.|+.++..+... ++.+
T Consensus 89 ~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~a~~~-------l~~a--- 158 (343)
T 3rys_A 89 RAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFLRDMSEDSALEV-------LDQL--- 158 (343)
T ss_dssp HHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTSCHHHHHHH-------HHHH---
T ss_pred HHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCCCHHHHHHH-------HHHH---
Confidence 9999999999999999665433 2 233444433 234568899999999999998544332 2332
Q ss_pred hHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCCC
Q psy8141 135 LFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLN 214 (480)
Q Consensus 135 L~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl~ 214 (480)
..|.+.|+|||++|+|. ++||..|...|..| ++.|++
T Consensus 159 --------------~~~~~~vvG~dL~g~E~--------------------~~~~~~~~~~~~~A---------~~~gl~ 195 (343)
T 3rys_A 159 --------------LAMHAPIAGIGLDSAEV--------------------GNPPSKFERLYQRA---------AEAGLR 195 (343)
T ss_dssp --------------HHTTCCCCEEEEESCCT--------------------TCCGGGGHHHHHHH---------HHTTCE
T ss_pred --------------HhCCCCEEEEecCCccc--------------------CCCHHHHHHHHHHH---------HHCCCe
Confidence 13567899999999997 46899999999999 999987
Q ss_pred CCCcccccCCCCChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHH
Q psy8141 215 TFVLRPHCGEAGPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQY 292 (480)
Q Consensus 215 ~~~l~~HaGE~~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~y 292 (480)
. ++||||+++++++++|+ ++++|||||+. +.++|.++.
T Consensus 196 ~---~~HagE~~~~~~i~~al~~lg~~rIgHgv~-------------------------------------l~~d~~l~~ 235 (343)
T 3rys_A 196 R---IAHAGEEGPASYITEALDVLHVERIDHGIR-------------------------------------CMEDTDVVQ 235 (343)
T ss_dssp E---EEEESSSSCHHHHHHHHHTSCCSEEEECGG-------------------------------------GGGCHHHHH
T ss_pred E---EEeeCCCCCHHHHHHHHhcCCcceeeeeee-------------------------------------ecCChHHHH
Confidence 6 99999999999999999 89999999999 667899999
Q ss_pred HHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcC
Q psy8141 293 LYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFH 372 (480)
Q Consensus 293 l~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~ 372 (480)
++..++|++++||+||..|+. ++++..||++.|+++|++|+||||||++|+
T Consensus 236 ~l~~~~i~le~cP~SN~~l~~-----------------------------~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~~ 286 (343)
T 3rys_A 236 RLVAEQVPLTVCPLSNVRLRA-----------------------------VDKLADHPLPEMLAIGLNVCVNSDDPAYFG 286 (343)
T ss_dssp HHHHHTCCEEECHHHHHHTTS-----------------------------SSCGGGCSHHHHHHTTCCEEECCBSTTTTT
T ss_pred HHHhcCCCeeEchhHHHHhCC-----------------------------CCCcccchHHHHHHCCCeEEEeCCCccccC
Confidence 999999999999999999854 457889999999999999999999999999
Q ss_pred CCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhccc
Q psy8141 373 FTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGPN 421 (480)
Q Consensus 373 ~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~ 421 (480)
+ +|++||..+++.++|+.+|+.+|++||+.+||+++++|++|+..+
T Consensus 287 ~---~l~~E~~~a~~~~~l~~~~l~~l~~nsi~~sf~~~~~K~~l~~~~ 332 (343)
T 3rys_A 287 G---YVDDNFEQLVKVLEFSVPEQATLAANSIRSSFASDARKAVLLDEV 332 (343)
T ss_dssp C---CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 8 599999999999999999999999999999999999999998765
No 4
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=100.00 E-value=7.8e-48 Score=397.99 Aligned_cols=291 Identities=17% Similarity=0.126 Sum_probs=234.9
Q ss_pred cCCCccccccccCCc----cccchhhhcCCCCCCCCccccc---------------ccc-----ccC-CHHHHHHHHHHH
Q psy8141 5 ASLPHSTKIVHEDKK----TIADTDKHFKPSDNDSSTDQVA---------------PLW-----QYK-TISDLSNQKSEV 59 (480)
Q Consensus 5 ~~lp~~~l~~h~~~~----~~~~~~~f~~~~~~~~~~~~l~---------------~~f-----~l~-t~~~la~l~~~v 59 (480)
.+|||++||+|++|+ |+.++.+-.+...+..+.++++ ++| +|+ |+++|+++++++
T Consensus 4 ~~lPK~ELH~HL~Gsl~p~tl~~La~~~~~~lp~~~~~~l~~~~~~~~~~~L~~fl~~f~~~~~vl~~~~edl~~~a~e~ 83 (367)
T 3iar_A 4 FDKPKVELHVHLDGSIKPETILYYGRRRGIALPANTAEGLLNVIGMDKPLTLPDFLAKFDYYMPAIAGCREAIKRIAYEF 83 (367)
T ss_dssp CCSCEEECCBBGGGSCCHHHHHHHHHHHTCCCSCSSHHHHHHHHCCSSCCCHHHHHGGGGGTHHHHTTCHHHHHHHHHHH
T ss_pred CCCCeeEeeecccCCCCHHHHHHHHHhcCCCCCcCCHHHHHHHhccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 489999999999974 5655555422222111111111 122 466 789999999999
Q ss_pred HHHHHHCCceEEEEEEeccCCChh-----------------h-HHHHHHHHH-HcccccceeeeecccccccChhhhHHH
Q psy8141 60 AADLEESKYQNAELRLSIYGKSED-----------------E-WDKLATWAI-ESNVYSNNIRWLIQIPRLYDIFKSNKL 120 (480)
Q Consensus 60 i~~l~~~~v~y~Elr~s~~~~~~~-----------------e-~~~la~w~~-~~~~~~~~irwiv~i~R~~~~~~~~~~ 120 (480)
+++++++||+|+|+|++|+.+... + .+.+.+.+. ....+++.+|||+++.|+.+. .+
T Consensus 84 ~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~-~a--- 159 (367)
T 3iar_A 84 VEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCCMRHQPN-WS--- 159 (367)
T ss_dssp HHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTCGG-GH---
T ss_pred HHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEeCCCCCH-HH---
Confidence 999999999999999999765422 2 233444443 235568999999999998754 22
Q ss_pred HhhHHHHHHHHhhhhHhhhcCCCCChhhhcc-cCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCCh---HhHHHHH
Q psy8141 121 INNFQEILQNIFKPLFEVTNDSSSHPHLHKF-LQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPC---YAYYQYY 196 (480)
Q Consensus 121 v~~f~~~L~~if~pL~~a~~~p~~~~~l~~f-l~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp---~~f~~yy 196 (480)
.++++.+ ..| .+.|+|||++|+|.. +|| ..|...|
T Consensus 160 ----~e~~~la-----------------~~~~~~~vvG~dL~g~E~~--------------------~~~~~~~~f~~~f 198 (367)
T 3iar_A 160 ----PKVVELC-----------------KKYQQQTVVAIDLAGDETI--------------------PGSSLLPGHVQAY 198 (367)
T ss_dssp ----HHHHHHH-----------------HHTTTTTEEEEEEESCTTS--------------------TTGGGCHHHHHHH
T ss_pred ----HHHHHHH-----------------HhhCCCCEEEEcCCCcccC--------------------CCcchHHHHHHHH
Confidence 2233332 133 467999999999984 466 6899999
Q ss_pred HHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchh
Q psy8141 197 TYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMM 274 (480)
Q Consensus 197 ~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~ 274 (480)
..| ++.|++. ++||||+++++++++|+ ++++|||||+.
T Consensus 199 ~~A---------~~~gl~~---~~HagE~~~~~~i~~al~~lg~~RIgHgv~---------------------------- 238 (367)
T 3iar_A 199 QEA---------VKSGIHR---TVHAGEVGSAEVVKEAVDILKTERLGHGYH---------------------------- 238 (367)
T ss_dssp HHH---------HHHTCEE---EEEESSSSCHHHHHHHHHTSCCSEEEECGG----------------------------
T ss_pred HHH---------HHcCCee---EEecCCcCChHHHHHHHHccCCceeeeeee----------------------------
Confidence 998 8889776 99999999999999999 89999999999
Q ss_pred hhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHH
Q psy8141 275 AENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEY 354 (480)
Q Consensus 275 ~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l 354 (480)
+.++|.++.++..++|++++||+||..++. +.++..||++.|
T Consensus 239 ---------l~~d~~l~~~l~~~~i~le~cP~SN~~l~~-----------------------------~~~~~~hPi~~l 280 (367)
T 3iar_A 239 ---------TLEDQALYNRLRQENMHFEICPWSSYLTGA-----------------------------WKPDTEHAVIRL 280 (367)
T ss_dssp ---------GGGCHHHHHHHHHTTCEEEECHHHHHHTSS-----------------------------SCTTSCCHHHHH
T ss_pred ---------ecCCHHHHHHHHhCCcEEEECHHHHHHhCC-----------------------------CCCcccChHHHH
Confidence 667899999999999999999999999864 456889999999
Q ss_pred HHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhccc
Q psy8141 355 LARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGPN 421 (480)
Q Consensus 355 ~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~~ 421 (480)
+++|++|+||||||++|+++ |++||..+++.++|+.+|+++|++||+.+||+++++|++|+...
T Consensus 281 l~~Gv~v~l~TDdp~~~~~~---l~~e~~~a~~~~glt~~el~~l~~nsi~~sf~~~~~K~~l~~~~ 344 (367)
T 3iar_A 281 KNDQANYSLNTDDPLIFKST---LDTDYQMTKRDMGFTEEEFKRLNINAAKSSFLPEDEKRELLDLL 344 (367)
T ss_dssp HHTTCCEEECCBSHHHHTCC---HHHHHHHHHHHHCCCHHHHHHHHHHHHHTSSSCHHHHHHHHHHH
T ss_pred HHCCCEEEECCCCccccCCC---HHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 99999999999999999974 99999999999999999999999999999999999999999765
No 5
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=100.00 E-value=1.5e-47 Score=390.24 Aligned_cols=286 Identities=17% Similarity=0.207 Sum_probs=230.6
Q ss_pred ccccCCCccccccccCCc----cccchhhhcCCCCCCCCcccccc---------c---c-----ccCCHHHHHHHHHHHH
Q psy8141 2 DNVASLPHSTKIVHEDKK----TIADTDKHFKPSDNDSSTDQVAP---------L---W-----QYKTISDLSNQKSEVA 60 (480)
Q Consensus 2 ~~~~~lp~~~l~~h~~~~----~~~~~~~f~~~~~~~~~~~~l~~---------~---f-----~l~t~~~la~l~~~vi 60 (480)
+.+++|||++||+|++|+ |+.++.+-.+...+..+.++++. . | +++|+++|++++++++
T Consensus 5 ~~~~~lPK~ELH~Hl~Gsl~~~t~~~la~~~~~~lp~~~~~~l~~~~~~~~l~~fl~~~~~~~~vl~t~ed~~~~a~~~~ 84 (326)
T 3pao_A 5 EWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRKAYAFNNLQEFLDLYYAGADVLRTEQDFYDLTWAYL 84 (326)
T ss_dssp HHHHHSCEEECSBBGGGGCCHHHHHHHHHHTTCCCSSSSHHHHHHTCCCSSHHHHHHHHHHHGGGCCSHHHHHHHHHHHH
T ss_pred HHHHhCCceEEEecccCCCCHHHHHHHHHhcCCCCCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 457899999999999974 67777665222221111122221 1 1 5889999999999999
Q ss_pred HHHHHCCceEEEEEEeccCCC-----hhh-HHHHHHHHHH-cccccceeeeecccccccChhhhHHHHhhHHHHHHHHhh
Q psy8141 61 ADLEESKYQNAELRLSIYGKS-----EDE-WDKLATWAIE-SNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFK 133 (480)
Q Consensus 61 ~~l~~~~v~y~Elr~s~~~~~-----~~e-~~~la~w~~~-~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~~L~~if~ 133 (480)
++++++||+|+|+|++|+.+. .++ ++.+.+.+.+ .+.+++.+|+|+++.|..++..+... ++.+
T Consensus 85 ~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~a~~~-------~~~a-- 155 (326)
T 3pao_A 85 QKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKT-------LDQA-- 155 (326)
T ss_dssp HHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEETTSCHHHHHHH-------HHHH--
T ss_pred HHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeCCCCCHHHHHHH-------HHHH--
Confidence 999999999999999997643 233 3444444432 34568999999999999988543332 2332
Q ss_pred hhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHHHHCCC
Q psy8141 134 PLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDL 213 (480)
Q Consensus 134 pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r~~~gl 213 (480)
..|.+.|+|||++|+|. ++||..|...|..| ++.|+
T Consensus 156 ---------------~~~~~~vvG~dL~g~E~--------------------~~~~~~~~~~~~~A---------~~~gl 191 (326)
T 3pao_A 156 ---------------LPFRDAFIAVGLDSSEV--------------------GHPPSKFQRVFDRA---------RSEGF 191 (326)
T ss_dssp ---------------GGGGGGCSEEEEESCCT--------------------TCCGGGGHHHHHHH---------HHTTC
T ss_pred ---------------hhccccceeeCCCCCCC--------------------CCCHHHHHHHHHHH---------HHcCC
Confidence 24566899999999996 46899999999999 99998
Q ss_pred CCCCcccccCCCCChhhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhccccccccCChHHH
Q psy8141 214 NTFVLRPHCGEAGPIQHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQ 291 (480)
Q Consensus 214 ~~~~l~~HaGE~~~~~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~ 291 (480)
+. ++||||.++++++++|+ ++++|||||+. +.++|.+.
T Consensus 192 ~~---~~HagE~~~~~~i~~al~~lg~~rigHgv~-------------------------------------l~~d~~l~ 231 (326)
T 3pao_A 192 LT---VAHAGEEGPPEYIWEALDLLKVERIDHGVR-------------------------------------AFEDERLM 231 (326)
T ss_dssp EE---CEEESSSSCHHHHHHHHHTTCCSSEEECGG-------------------------------------GGGCHHHH
T ss_pred ce---eeecCCCCCHHHHHHHHhcCCCceeeeeee-------------------------------------ecccHHHH
Confidence 76 99999999999999999 89999999999 56789999
Q ss_pred HHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCc
Q psy8141 292 YLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQF 371 (480)
Q Consensus 292 yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f 371 (480)
.++..++|++++||+||..++. ++++..||+++|+++|++|+||||||++|
T Consensus 232 ~~l~~~~i~le~cP~SN~~l~~-----------------------------~~~~~~hPi~~ll~~Gv~V~l~TDdp~~~ 282 (326)
T 3pao_A 232 RRLIDEQIPLTVCPLSNTKLCV-----------------------------FDDMSQHTILDMLERGVKVTVNSDDPAYF 282 (326)
T ss_dssp HHHHHHTCCEEECHHHHHHTTS-----------------------------SSSGGGCCHHHHHHHTCCEEECCBSHHHH
T ss_pred HHHHHcCCeEEECchhHHHhCC-----------------------------CCCcccChHHHHHHCCCeEEEeCCCcccC
Confidence 9999999999999999999854 45788999999999999999999999999
Q ss_pred CCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChH
Q psy8141 372 HFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHG 412 (480)
Q Consensus 372 ~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~ 412 (480)
++ +|.+||..|++.++|+.+|+.++++||+++||.++.
T Consensus 283 ~~---~l~~e~~~a~~~~~l~~~~l~~l~~nsi~~sf~~~~ 320 (326)
T 3pao_A 283 GG---YVTENFHALQQSLGMTEEQARRLAQNSLDARLVKEG 320 (326)
T ss_dssp TC---CHHHHHHHHHHHHCCCHHHHHHHHHHHHHTCC----
T ss_pred CC---CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccc
Confidence 97 599999999999999999999999999999998874
No 6
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=100.00 E-value=2.8e-43 Score=376.56 Aligned_cols=272 Identities=18% Similarity=0.176 Sum_probs=222.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHCCceEEEEEEe--ccCC------Chhh-HHHHHHHHHH-ccccc--ceeeeeccccccc
Q psy8141 45 QYKTISDLSNQKSEVAADLEESKYQNAELRLS--IYGK------SEDE-WDKLATWAIE-SNVYS--NNIRWLIQIPRLY 112 (480)
Q Consensus 45 ~l~t~~~la~l~~~vi~~l~~~~v~y~Elr~s--~~~~------~~~e-~~~la~w~~~-~~~~~--~~irwiv~i~R~~ 112 (480)
+|+++++|+++++++++++++|||+|+|+|++ |..+ +..+ ++.+.+.+.+ ....+ +.+|+|+++.|..
T Consensus 191 ll~~~~~~~~~~~e~l~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~~~~~fI~~rlI~~~~R~~ 270 (508)
T 3lgd_A 191 LIHYAPVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVETHPEFIGIKIIYSDHRSK 270 (508)
T ss_dssp HHTBHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEEETTS
T ss_pred HhcCHHHHHHHHHHHHHHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEEEecCCC
Confidence 46788899999999999999999999999954 4322 2233 2444444332 22334 7899999999999
Q ss_pred ChhhhHHHHhhHHHHHHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhH
Q psy8141 113 DIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAY 192 (480)
Q Consensus 113 ~~~~~~~~v~~f~~~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f 192 (480)
++..+...+ +.+++. ...+++.||||||+|+|.. +.||..|
T Consensus 271 ~~e~a~e~l---~~a~~~-----------------~~~~~~~VvG~DLaG~E~~-------------------g~p~~~f 311 (508)
T 3lgd_A 271 DVAVIAESI---RMAMGL-----------------RIKFPTVVAGFDLVGHEDT-------------------GHSLHDY 311 (508)
T ss_dssp CHHHHHHHH---HHHHHH-----------------HHHCTTTEEEEEEESCTTT-------------------SCCTGGG
T ss_pred CHHHHHHHH---HHHHHH-----------------HhhCCCceEEeccCCCCCC-------------------CCCHHHH
Confidence 985544433 222211 1246788999999999974 3688899
Q ss_pred HHHHHH--HhhhhhhHHHHHCCCCCCCcccccCCCCC-----hhhHHHHh-hcccccccccccccccchhhhhhhhcccc
Q psy8141 193 YQYYTY--ANLTVLNHFRRARDLNTFVLRPHCGEAGP-----IQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGT 264 (480)
Q Consensus 193 ~~yy~~--Anl~~LN~~r~~~gl~~~~l~~HaGE~~~-----~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~ 264 (480)
...|.. | ++.|++. ++||||+++ ++++++|+ ++++|||||+.
T Consensus 312 ~~~f~~~~A---------~~~gl~~---t~HAGE~~~~g~~~~~~i~~Al~Lga~RIgHGv~------------------ 361 (508)
T 3lgd_A 312 KEALMIPAK---------DGVKLPY---FFHAGETDWQGTSIDRNILDALMLNTTRIGHGFA------------------ 361 (508)
T ss_dssp HHHHTHHHH---------TTCCCCB---CCEECCSSCCSSTTTTHHHHHHHTTCSSEEECTT------------------
T ss_pred HHHHHHHHH---------HHcCCce---eeecccccCCCCCcHHHHHHHHhcCCceeeeeEe------------------
Confidence 999988 6 6677665 999999853 68999999 99999999999
Q ss_pred hhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccc
Q psy8141 265 IQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFL 344 (480)
Q Consensus 265 ~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (480)
+.++|.|+++++.++|+||+||+||..|+. +.
T Consensus 362 -------------------l~~dp~l~~~l~~~~I~levCP~SN~~l~~-----------------------------v~ 393 (508)
T 3lgd_A 362 -------------------LSKHPAVRTYSWKKDIPIEVCPISNQVLKL-----------------------------VS 393 (508)
T ss_dssp -------------------GGGCHHHHHHHHHTTCCEEECHHHHHHTTS-----------------------------CS
T ss_pred -------------------cCccHHHHHHHHhcCCeEEECcchHHHhCC-----------------------------CC
Confidence 677999999999999999999999999864 45
Q ss_pred cccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCC---CHHHHHHHHHHHHHHcCCChHHHHHHhccc
Q psy8141 345 NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKL---SSCDMCELARNSVLMSGFPHGMKQYWLGPN 421 (480)
Q Consensus 345 sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~L---s~~Dl~eLarNSv~~S~~~~~~K~~wlg~~ 421 (480)
++..||++.|+++|++|+||||||++|++| +|++||..|++.+++ +.+|+++|++|||.+||+++++|++|+.
T Consensus 394 ~~~~hP~~~ll~~Gv~V~l~TDdp~~f~~~--~Ls~Ey~~a~~~~~~~~~~~~~l~~La~NSi~~Sfl~~~eK~~ll~-- 469 (508)
T 3lgd_A 394 DLRNHPVATLMATGHPMVISSDDPAMFGAK--GLSYDFYEVFMGIGGMKADLRTLKQLAMNSIKYSTLLESEKNTFME-- 469 (508)
T ss_dssp SGGGCTHHHHHHTTCCEEECCBSHHHHTCC--TTHHHHHHHHHTTSCTTCCHHHHHHHHHHHHHTSSSCHHHHHHHHH--
T ss_pred CcccChHHHHHHCCCcEEEcCCCccccCCC--chHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH--
Confidence 789999999999999999999999999974 799999999999876 8999999999999999999999988864
Q ss_pred ccccCCCCCcccccCCcchHHHHHHHHHHHHHHHHHHHHhcc
Q psy8141 422 YTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFRVFKGN 463 (480)
Q Consensus 422 ~~~~~~~gn~~~~~nVp~~R~~~R~~tl~~E~~~~~~~~~~~ 463 (480)
.|..+|+.+|+|++..
T Consensus 470 --------------------------~~~~~~~~f~~~~~~~ 485 (508)
T 3lgd_A 470 --------------------------IWKKRWDKFIADVATK 485 (508)
T ss_dssp --------------------------HHHHHHHHHHHHHHC-
T ss_pred --------------------------HHHHHHHHHHHHHHhc
Confidence 4678899999999753
No 7
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=100.00 E-value=3.1e-41 Score=348.73 Aligned_cols=291 Identities=14% Similarity=0.134 Sum_probs=227.6
Q ss_pred cccCCCccccccccCCc----cccchhhhcCCC---------------CCCCCcccccccc-----ccCCHHHHHHHHHH
Q psy8141 3 NVASLPHSTKIVHEDKK----TIADTDKHFKPS---------------DNDSSTDQVAPLW-----QYKTISDLSNQKSE 58 (480)
Q Consensus 3 ~~~~lp~~~l~~h~~~~----~~~~~~~f~~~~---------------~~~~~~~~l~~~f-----~l~t~~~la~l~~~ 58 (480)
.+++|||++||+|+++. ++.++.+-.+.. +...+..+.-+.| ++.|++++++++++
T Consensus 40 ~~~~lPK~eLH~Hl~gsl~~~~l~~la~~~~~~p~~~~~~l~~~~~~~~~~~~L~~~l~~~~~~~~~~~t~ed~~~~a~~ 119 (371)
T 2pgf_A 40 IWKRIPKCELHCHLDLCFSADFFVSCIRKYNLQPNLSDEEVLDYYLFAKGGKSLGEFVEKAIKVADIFHDYEVIEDLAKH 119 (371)
T ss_dssp HHHHSCEEEEEEEGGGCCCHHHHHHHHHHTTCCTTSCHHHHHHHHCCTTCCSCHHHHHHHHHHHGGGCCSHHHHHHHHHH
T ss_pred HHHhCcHhhheeCCccCCCHHHHHHHHHHcCCCCCCCHHHHHHHHhcccCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 36789999999999974 445554432211 1111111111111 46799999999999
Q ss_pred HHHHHHHCCceEEEEEEeccC-CChhh------HHHHHHHHH-Hcccc--cceeeeecccccccChhhhHHHHhhHHHHH
Q psy8141 59 VAADLEESKYQNAELRLSIYG-KSEDE------WDKLATWAI-ESNVY--SNNIRWLIQIPRLYDIFKSNKLINNFQEIL 128 (480)
Q Consensus 59 vi~~l~~~~v~y~Elr~s~~~-~~~~e------~~~la~w~~-~~~~~--~~~irwiv~i~R~~~~~~~~~~v~~f~~~L 128 (480)
+++++.++||+|+|+|++|+. +...+ .+.+.+.+. ..+.+ ++.++++++++|.++.... .+.+
T Consensus 120 ~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~r~~~~~~~-------~~~~ 192 (371)
T 2pgf_A 120 AVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDTGHEAANI-------KASA 192 (371)
T ss_dssp HHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEESSTTCCH-------HHHH
T ss_pred HHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCHHHH-------HHHH
Confidence 999999999999999999865 33222 232333332 23345 7889999999998776422 2223
Q ss_pred HHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCCCCCCCCCcCCCCCCCChHhHHHHHHHHhhhhhhHHH
Q psy8141 129 QNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNHFR 208 (480)
Q Consensus 129 ~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~~~~~~~P~~w~~~~~Pp~~f~~yy~~Anl~~LN~~r 208 (480)
+.+ +. +...|+|||++|+|. . |..|...+..|
T Consensus 193 ~~a----------------~~-~~~~vvg~dl~g~e~--------------------~--~~~~~~~~~~A--------- 224 (371)
T 2pgf_A 193 DFC----------------LK-HKADFVGFDHGGHEV--------------------D--LKEYKEIFDYV--------- 224 (371)
T ss_dssp HHH----------------HH-TTTTEEEEEEEESCC--------------------C--GGGGHHHHHHH---------
T ss_pred HHH----------------Hh-CCCCEEEEecCCCcc--------------------c--HHHHHHHHHHH---------
Confidence 322 11 345799999999886 2 56788888888
Q ss_pred HHCCCCCCCcccccCCC--CCh-hhHHHHh--hcccccccccccccccchhhhhhhhcccchhhhhhhchhhhhcccccc
Q psy8141 209 RARDLNTFVLRPHCGEA--GPI-QHLVCGF--MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLL 283 (480)
Q Consensus 209 ~~~gl~~~~l~~HaGE~--~~~-~~l~~a~--l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~ 283 (480)
++.|++. ++||||. +++ +++.+++ ++++|||||+.
T Consensus 225 ~~~gl~~---~~HagE~~~~~~~~~i~~al~~lg~~ri~Hgv~------------------------------------- 264 (371)
T 2pgf_A 225 RESGVPL---SVHAGEDVTLPNLNTLYSAIQVLKVERIGHGIR------------------------------------- 264 (371)
T ss_dssp HHTTCCB---EEEESCCTTSSSSHHHHHHHHTSCCSEEEECGG-------------------------------------
T ss_pred HHcCCcE---EEeeCCCCCCCchHHHHHHHhccCCCEEecchh-------------------------------------
Confidence 8889776 9999999 888 9999999 59999999999
Q ss_pred ccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEE
Q psy8141 284 LRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSL 363 (480)
Q Consensus 284 l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsL 363 (480)
+.++|.|..++..++|++++||+||..++. +.++..||++.|+++|++|+|
T Consensus 265 l~~~~~l~~~l~~~~i~v~~cP~SN~~l~~-----------------------------~~~~~~~pi~~ll~~Gv~V~l 315 (371)
T 2pgf_A 265 VAESQELIDMVKEKNILLEVCPISNVLLKN-----------------------------AKSMDTHPIRQLYDAGVKVSV 315 (371)
T ss_dssp GGGCHHHHHHHHHTTCEEEECHHHHHHTTS-----------------------------SSCGGGCTHHHHHHTTCEEEE
T ss_pred ccccHHHHHHHHHcCCeEEECcchhHHhCC-----------------------------CCccccChHHHHHHCCCeEEE
Confidence 567888988999999999999999999853 345788999999999999999
Q ss_pred cCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChHHHHHHhcc
Q psy8141 364 STDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWLGP 420 (480)
Q Consensus 364 sTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eLarNSv~~S~~~~~~K~~wlg~ 420 (480)
|||||+.|++ +|.+||..+++.++|+.+|++++++||+.+||+++++|++|++.
T Consensus 316 gTD~~~~~~~---~l~~e~~~a~~~~~l~~~~l~~lt~ns~~asf~~~~~K~~l~~~ 369 (371)
T 2pgf_A 316 NSDDPGMFLT---NINDDYEELYTHLNFTLEDFMKMNEWALEKSFMDSNIKDKIKNL 369 (371)
T ss_dssp CCBCHHHHTC---CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHH
T ss_pred eCCCCcccCC---CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 9999999985 69999999999999999999999999999999999999999864
No 8
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=98.70 E-value=2e-06 Score=88.38 Aligned_cols=139 Identities=18% Similarity=0.124 Sum_probs=101.2
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHH-----------Hh--hcc-cccccccccccccc
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVC-----------GF--MMA-ENISHGLLLRKAPV 252 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~-----------a~--l~a-~RIgHG~~l~~~~~ 252 (480)
.++..+......| +++|+.. ..|++|....+...+ .. ++. .+|.|++.+
T Consensus 216 ~~~~~l~~~~~~a---------~~~g~~v---~~H~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~H~~~~----- 278 (456)
T 3ls9_A 216 DKPELFEAFAQMA---------ADYDVRL---HTHFYEPLDAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVP----- 278 (456)
T ss_dssp SCHHHHHHHHHHH---------HHHTCEE---EEEECCTTHHHHHHHHHSSCHHHHHHHTTCSSTTEEEEECCSC-----
T ss_pred CCHHHHHHHHHHH---------HHCCCCE---EEEeCCCchHHHHHHHhCCCHHHHHHHcCCCCCCcEEEeccCC-----
Confidence 4667788888888 8888775 899999753322211 11 122 267788773
Q ss_pred hhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhc
Q psy8141 253 LQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRI 332 (480)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~ 332 (480)
++....++...++.+++||.||..++.
T Consensus 279 ----------------------------------~~~~~~~l~~~g~~~~~~p~s~~~l~~------------------- 305 (456)
T 3ls9_A 279 ----------------------------------PREEIPEFADAGVAIAHLIAPDLRMGW------------------- 305 (456)
T ss_dssp ----------------------------------CGGGHHHHHHHTCEEEECHHHHHHTTC-------------------
T ss_pred ----------------------------------CHHHHHHHHHcCCEEEEChhHHhhcCC-------------------
Confidence 233344567789999999999987643
Q ss_pred ccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHc----------CCCHHHHHHHH-H
Q psy8141 333 AMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVW----------KLSSCDMCELA-R 401 (480)
Q Consensus 333 ~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~----------~Ls~~Dl~eLa-r 401 (480)
...|++.|++.|++|+++||.|..... ..+.+|+..+.... +++..++.+++ .
T Consensus 306 --------------~~~~~~~~~~~Gv~v~lgtD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~ 369 (456)
T 3ls9_A 306 --------------GLAPIREYLDAGITVGFGTTGSASNDG--GNLLGDLRLAALAHRPADPNEPEKWLSARELLRMATR 369 (456)
T ss_dssp --------------CCCCHHHHHHTTCEEEECCCCTTSSCC--CCHHHHHHHHHHHTGGGSTTCGGGSCCHHHHHHHTTH
T ss_pred --------------CcchHHHHHHCCCcEEEECCCCccCCC--CCHHHHHHHHHHHhccccccccccCCCHHHHHHHHHH
Confidence 247999999999999999999984332 25889998887664 79999987775 7
Q ss_pred HHHHHcCCCh
Q psy8141 402 NSVLMSGFPH 411 (480)
Q Consensus 402 NSv~~S~~~~ 411 (480)
|+..+.+.++
T Consensus 370 ~~A~~lg~~~ 379 (456)
T 3ls9_A 370 GSAECLGRPD 379 (456)
T ss_dssp HHHHHTTCTT
T ss_pred HHHHHhCCCC
Confidence 9999888763
No 9
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=98.65 E-value=3.2e-07 Score=95.35 Aligned_cols=138 Identities=16% Similarity=0.073 Sum_probs=97.7
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCC-hhh-----------HHHHh--hcc-ccccccccccccc
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGP-IQH-----------LVCGF--MMA-ENISHGLLLRKAP 251 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~-~~~-----------l~~a~--l~a-~RIgHG~~l~~~~ 251 (480)
.++..+...+..| +++|+.. ..|++|... .+. ..... +++ ..|.||+.+
T Consensus 237 ~~~e~l~~~~~~A---------~~~g~~v---~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~---- 300 (479)
T 3h4u_A 237 VSRDLMRDAAVLA---------REYGVSL---HTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQL---- 300 (479)
T ss_dssp SCHHHHHHHHHHH---------HHHTCEE---EEEESCSHHHHHC-------CHHHHHHHTTCCSTTEEEEECTTC----
T ss_pred CCHHHHHHHHHHH---------HhcCCCE---EEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCeEEEEecCC----
Confidence 3667788888888 8888775 899998642 111 11111 121 247788762
Q ss_pred chhhhhhhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhh
Q psy8141 252 VLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVR 331 (480)
Q Consensus 252 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~ 331 (480)
++....++...++.+++||.||..++.
T Consensus 301 -----------------------------------~~~~~~~l~~~g~~v~~~p~s~~~l~~------------------ 327 (479)
T 3h4u_A 301 -----------------------------------DDAGIGLFARTGTGVAHCPCSNMRLAS------------------ 327 (479)
T ss_dssp -----------------------------------CHHHHHHHHHHTCEEEECHHHHHHTTC------------------
T ss_pred -----------------------------------CHHHHHHHHHcCCeEEEChhHhhhcCC------------------
Confidence 445555677789999999999987642
Q ss_pred cccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHc----C---CCHHHHHHH-HHHH
Q psy8141 332 IAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVW----K---LSSCDMCEL-ARNS 403 (480)
Q Consensus 332 ~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~----~---Ls~~Dl~eL-arNS 403 (480)
...|+..+++.|++|+++||.|..++.. .+.+|+..+.... + ++..++.++ +.|+
T Consensus 328 ---------------~~~~~~~~~~~Gv~v~lgtD~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~ 390 (479)
T 3h4u_A 328 ---------------GIAPVKKMRLAGVPVGLGVDGSASNDGA--QMVAEVRQALLLQRVGFGPDAMTAREALEIATLGG 390 (479)
T ss_dssp ---------------CCCCHHHHHHTTCCEEECCCCTTSSCCC--CHHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTHHH
T ss_pred ---------------CCCCHHHHHHCCCeEEEeCCCCccCCCc--CHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Confidence 2469999999999999999999865332 5888887665542 4 899887666 4688
Q ss_pred HHHcCCC
Q psy8141 404 VLMSGFP 410 (480)
Q Consensus 404 v~~S~~~ 410 (480)
..+.+.+
T Consensus 391 A~~lg~~ 397 (479)
T 3h4u_A 391 AKVLNRD 397 (479)
T ss_dssp HHHHTCS
T ss_pred HHHhCCC
Confidence 8888875
No 10
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=98.64 E-value=5.8e-07 Score=92.54 Aligned_cols=90 Identities=18% Similarity=0.098 Sum_probs=68.8
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++....++...++.+.+||.||..++. ...|+..+++.|++|+++||
T Consensus 263 ~~~~~~~l~~~g~~v~~~p~s~~~~~~---------------------------------~~~~~~~~~~~Gv~v~lgtD 309 (451)
T 4dyk_A 263 DNDDLAMLVETNSSVIHCPESNLKLAS---------------------------------GFCPVEKLWQAGVNVAIGTD 309 (451)
T ss_dssp CHHHHHHHHHHTCEEEECHHHHHHTTC---------------------------------CCCCHHHHHHHTCCEEECCC
T ss_pred CHHHHHHHHHcCCEEEEChhhhhhccC---------------------------------CcccHHHHHhCCCeEEEECC
Confidence 344455667789999999999987642 23699999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHH--------HcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQ--------VWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~--------~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
.|..... ..+.+|+..+.. ..+++..++.++ ..|+....+.++
T Consensus 310 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~ 361 (451)
T 4dyk_A 310 GAASNND--LDLLGETRTAALLAKAVYGQATALDAHRALRMATLNGARALGLER 361 (451)
T ss_dssp CGGGSSC--CCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHHTCTT
T ss_pred CCccCCC--CCHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCC
Confidence 9985322 258888877662 357999996555 579999888765
No 11
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=98.38 E-value=4.4e-05 Score=80.27 Aligned_cols=89 Identities=20% Similarity=0.156 Sum_probs=70.4
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++.-..++...++.+..||.||..++.+ -.|++.+++.|++|+|+||
T Consensus 306 ~~~~~~~l~~~g~~v~~~P~sn~~l~~g---------------------------------~~p~~~~~~~Gv~v~lGtD 352 (476)
T 4aql_A 306 SAEELNVFHERGASIAHCPNSNLSLSSG---------------------------------FLNVLEVLKHEVKIGLGTD 352 (476)
T ss_dssp CHHHHHHHHHHTCEEEECHHHHHHTTCC---------------------------------CCCHHHHHHTTCEEEECCC
T ss_pred CHHHHHHHHHcCCEEEECchhhhhhCcc---------------------------------hHHHHHHHHCCCcEEEeCC
Confidence 3444456777899999999999886432 3699999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHHH-----------cCCCHHHHHHHH-HHHHHHcCCCh
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQV-----------WKLSSCDMCELA-RNSVLMSGFPH 411 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~~-----------~~Ls~~Dl~eLa-rNSv~~S~~~~ 411 (480)
.+..+.. .+.+|+..+... .+++..++.+++ .|+....+.++
T Consensus 353 ~~~~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lgl~~ 406 (476)
T 4aql_A 353 VAGGYSY---SMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDG 406 (476)
T ss_dssp TTTSSCC---CHHHHHHHHHHHHHHHHHTTSSSSCCCHHHHHHHHTHHHHHHTTCTT
T ss_pred CCCCCCC---CHHHHHHHHHHHHhhhhcccCCCCcCCHHHHHHHHHHHHHHHhCCCC
Confidence 9864443 588999877654 589999987766 68888888765
No 12
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=98.23 E-value=0.00018 Score=74.97 Aligned_cols=90 Identities=16% Similarity=0.052 Sum_probs=68.6
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++....++...++.+.+||.||..++. ...|+..+++.|++|+++||
T Consensus 270 ~~~~i~~l~~~g~~v~~~p~s~~~~~~---------------------------------~~~~~~~~~~~Gv~v~lgtD 316 (472)
T 4dzh_A 270 TEAEIHLCAERGVSVVHCPESNLKLAS---------------------------------GFCPACALQRASVNLAIGTD 316 (472)
T ss_dssp CHHHHHHHHHHTCEEEECHHHHHHTTC---------------------------------CCCCHHHHHHTTCEEEECCC
T ss_pred CHHHHHHHHHcCCEEEEChHHHHhcCC---------------------------------CCccHHHHHHCCCCEEEECC
Confidence 344455667789999999999987642 23699999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHHH--------cCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQV--------WKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~~--------~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
.|.-... ..+.+|...+... .+++..++.++ +.|+..+.++++
T Consensus 317 ~~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~ 368 (472)
T 4dzh_A 317 GCASNND--LDMFSENRTAAILAKAVANDATALDAATTLRAATLGGARALGFGD 368 (472)
T ss_dssp CTTSSCC--CCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred CCcCCCC--CCHHHHHHHHHHHhhhhcCCCCcCCHHHHHHHHHHHHHHHcCCCC
Confidence 9974322 2588888776654 26999996655 579999988765
No 13
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=98.19 E-value=5e-05 Score=78.94 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=62.9
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++.-..++...++.+.+||.||..++. ...|++.|++.|++|+++||
T Consensus 274 ~~~~i~~la~~g~~v~~~P~sn~~lg~---------------------------------g~~p~~~~~~~Gv~v~lgtD 320 (453)
T 3mdu_A 274 DPAEVAAMARSGAVAGLCLSTEANLGD---------------------------------GIFPATDFLAQGGRLGIGSD 320 (453)
T ss_dssp CHHHHHHHHHHTCEEEECHHHHHHTTC---------------------------------CCCCHHHHHHTTCEEEECCB
T ss_pred CHHHHHHHHHcCCEEEECchhHhhcCC---------------------------------CCCCHHHHHHCCCEEEEECC
Confidence 445555677789999999999987643 23799999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHHHc---------------CCCHHHHHH-HHHHHHHHcCC
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQVW---------------KLSSCDMCE-LARNSVLMSGF 409 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~~~---------------~Ls~~Dl~e-LarNSv~~S~~ 409 (480)
.+. +. ++.+|+..+.... +++..++.+ .+.|+....+.
T Consensus 321 ~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~ 374 (453)
T 3mdu_A 321 SHV--SL---SVVEELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ 374 (453)
T ss_dssp TCS--CC---CHHHHHHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS
T ss_pred CCC--CC---CHHHHHHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC
Confidence 753 22 4778877665421 677888755 55677777665
No 14
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=98.17 E-value=0.00019 Score=74.15 Aligned_cols=90 Identities=14% Similarity=0.055 Sum_probs=68.1
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++....++...++.+++||.||..++. ...|+..+++.|++|+++||
T Consensus 288 ~~~~~~~l~~~g~~v~~~p~s~~~~~~---------------------------------~~~~~~~~~~~Gv~v~lgtD 334 (468)
T 3lnp_A 288 DDGDIKILQKTGASIIHCPESNLKLAS---------------------------------GFCPIAKLSAANIPLAIGTD 334 (468)
T ss_dssp CHHHHHHHHHHCCEEEECHHHHHHTTC---------------------------------CCCCHHHHHHTTCCEEECCC
T ss_pred CHHHHHHHHhcCCEEEEChhhhhhcCC---------------------------------CCCCHHHHHHCCCeEEEECC
Confidence 344455667789999999999987642 23699999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHH--------HcCCCHHHHHH-HHHHHHHHcCCCh
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQ--------VWKLSSCDMCE-LARNSVLMSGFPH 411 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~--------~~~Ls~~Dl~e-LarNSv~~S~~~~ 411 (480)
.|..... ..+.+|+..+.. ..+++..++.+ .+.|+..+.++++
T Consensus 335 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 386 (468)
T 3lnp_A 335 GAASNND--LDMFSETKTAALLAKGVSQDASAIPAIEALTMATLGGARALGIDD 386 (468)
T ss_dssp CTTSSCC--CCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred CCcCCCC--CCHHHHHHHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCCCC
Confidence 9985322 258888876652 34799999654 5679999888765
No 15
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=98.14 E-value=0.00016 Score=74.18 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=67.8
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++.....+...++.+.+||.||..++. ...|+..+++.|++|+++||
T Consensus 261 ~~~~~~~~~~~g~~~~~~p~~~~~~~~---------------------------------~~~~~~~~~~~Gv~v~lgTD 307 (447)
T 4f0r_A 261 NDAEVELAARHGLSTAHNPASNMKLAS---------------------------------GISPVSKLMDAGVAVGIGTD 307 (447)
T ss_dssp CHHHHHHHHHHTCEEEECHHHHHHTTC---------------------------------CCCCHHHHHHTTCEEEECCC
T ss_pred CHHHHHHHHHcCCEEEECchhhhhcCC---------------------------------CCCcHHHHHHCCCcEEEeCC
Confidence 344445666789999999999987532 23699999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHH--------HcCCCHHHHHH-HHHHHHHHcCCCh
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQ--------VWKLSSCDMCE-LARNSVLMSGFPH 411 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~--------~~~Ls~~Dl~e-LarNSv~~S~~~~ 411 (480)
.|..... ..+.+|+..+.. ..+++..++.+ ...|+....++++
T Consensus 308 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~n~A~~lg~~~ 359 (447)
T 4f0r_A 308 GAASNNK--LDMLAETRLAALLAKVGTLDPTSVPAAAAIRMATLNGARALGIAD 359 (447)
T ss_dssp CGGGTCC--CCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred CCcCCCC--CCHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 9975222 247888876652 35899999655 4579999888765
No 16
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=98.06 E-value=2.8e-05 Score=79.34 Aligned_cols=140 Identities=14% Similarity=0.052 Sum_probs=103.8
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchh
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQ 266 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~ 266 (480)
++..+......| ++.|+.. ..||.+....+.+..+. .+..+|.|+..+
T Consensus 221 ~~~~~~~~~~~a---------~~~g~~v---~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~------------------- 269 (416)
T 2q09_A 221 SLAQTEQVYLAA---------DQYGLAV---KGHMDQLSNLGGSTLAANFGALSVDHLEYL------------------- 269 (416)
T ss_dssp CHHHHHHHHHHH---------HHTTCEE---EEEESSSCCCSHHHHHHHTTCSEEEECTTC-------------------
T ss_pred CHHHHHHHHHHH---------HHCCCcE---EEEECCCCchHHHHHHHHcCCCEEeecccC-------------------
Confidence 456677777777 8888765 88999875434444444 677889999872
Q ss_pred hhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccc
Q psy8141 267 HLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNY 346 (480)
Q Consensus 267 ~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy 346 (480)
++....++...++.+.+||.+|..++. -
T Consensus 270 --------------------~~~~~~~~~~~g~~~~~~p~~~~~~~~--------------------------------~ 297 (416)
T 2q09_A 270 --------------------DPEGIQALAHRGVVATLLPTAFYFLKE--------------------------------T 297 (416)
T ss_dssp --------------------CHHHHHHHHHHTCEEEECHHHHHHTTC--------------------------------C
T ss_pred --------------------CHHHHHHHHHcCCeEEEcCccHHhhcc--------------------------------c
Confidence 345555666789999999998875421 1
Q ss_pred cCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 347 HRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 347 ~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
...|++.+++.|++++++||.+.... ....+.+++..+....+++..++.++ +.|+..+.+.++
T Consensus 298 ~~~~~~~~~~~Gv~~~~gtD~~~~~~-~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 362 (416)
T 2q09_A 298 KLPPVVALRKAGVPMAVSSDINPGTA-PIVSLRMAMNMACTLFGLTPVEAMAGVTRHAARALGEQE 362 (416)
T ss_dssp CCCCHHHHHHTTCCEEECCCCBTTTB-CCCCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred cccCHHHHHHCCCeEEEecCCCCccC-CCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCc
Confidence 23699999999999999999975321 11258899988887889999997666 679999888764
No 17
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=97.82 E-value=4.1e-05 Score=77.84 Aligned_cols=128 Identities=16% Similarity=0.158 Sum_probs=87.6
Q ss_pred HHCCCCCCCcccccCCCCChhhHHHHh--hccc-ccccccccccccchhhhhhhhcccchhhhhhhchhhhhcccccccc
Q psy8141 209 RARDLNTFVLRPHCGEAGPIQHLVCGF--MMAE-NISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLR 285 (480)
Q Consensus 209 ~~~gl~~~~l~~HaGE~~~~~~l~~a~--l~a~-RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~l~ 285 (480)
.+.|++. ..||.+..+........ ++.+ +|.||... .
T Consensus 217 ~~~~~~v---~iHa~~~~~i~~~~~~~~~~g~~~~i~H~~~~-------------------------------------~ 256 (396)
T 3ooq_A 217 LRKKIPA---RMHAHRADDILTAIRIAEEFGFNLVIEHGTEA-------------------------------------Y 256 (396)
T ss_dssp HTTSSCE---EEEECSHHHHHHHHHHHHHHTCCEEEEECTTG-------------------------------------G
T ss_pred HcCCCcE---EEEECchhHHHHHHHHHHHcCCCEEEecCchH-------------------------------------H
Confidence 4566654 99999986554444444 5666 89999872 1
Q ss_pred CChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcC
Q psy8141 286 KAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLST 365 (480)
Q Consensus 286 ~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsT 365 (480)
+. ...+...++++++||+.+...... ...-...|++.+++.|++|+++|
T Consensus 257 --~~-~~~l~~~gv~v~~~P~~~~~~~~~----------------------------~~~~~~~~~~~l~~~Gv~v~lgt 305 (396)
T 3ooq_A 257 --KI-SKVLAEKKIPVVVGPLLTFRTKLE----------------------------LKDLTMETIAKLLKDGVLIALMC 305 (396)
T ss_dssp --GG-HHHHHHHTCCEEECCCSSCCCSGG----------------------------GTTCCTTHHHHHHHTTCCEEECC
T ss_pred --HH-HHHHHHCCCCEEECcccccccchh----------------------------HHhhhhHHHHHHHHCCCEEEEEc
Confidence 22 335667899999999754422110 01123479999999999999999
Q ss_pred CCccCcCCCCcChHHHHHHHHHHcCCCHHHH-HHHHHHHHHHcCCCh
Q psy8141 366 DDPLQFHFTKEPLMEEYSIAAQVWKLSSCDM-CELARNSVLMSGFPH 411 (480)
Q Consensus 366 DDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl-~eLarNSv~~S~~~~ 411 (480)
|.|..... ++..++..+. ..+++..+. .-...|+....+.++
T Consensus 306 D~~~~~~~---~l~~~~~~~~-~~gl~~~~al~~~T~n~A~~lg~~~ 348 (396)
T 3ooq_A 306 DHPVIPLE---FATVQAATAM-RYGAKEEDLLKILTVNPAKILGLED 348 (396)
T ss_dssp TTTTSCGG---GHHHHHHHGG-GGTCCHHHHHHTTTHHHHHHTTCTT
T ss_pred CCCccCcc---HHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 99965433 4766666554 469999995 445679988888765
No 18
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=97.76 E-value=0.0013 Score=68.36 Aligned_cols=87 Identities=18% Similarity=0.141 Sum_probs=61.2
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+....+++..++.+++||.||..++. ...|++.+++.|++|+++||.
T Consensus 291 ~~~i~~l~~~gv~v~~~p~~~~~l~~---------------------------------~~~p~~~~~~~Gv~v~lgTD~ 337 (492)
T 2paj_A 291 ADEIALLAQTGTGVAHCPQSNGRLGS---------------------------------GICPVREMADAGVPVSIGVDG 337 (492)
T ss_dssp HHHHHHHHHHTCEEEECHHHHHCC--------------------------------------CCTTHHHHTCCEEECCCH
T ss_pred HHHHHHHHHcCCEEEECchhhcccCC---------------------------------CCCCHHHHHHCCCcEEEeCCC
Confidence 34445666689999999998865421 125888899999999999999
Q ss_pred ccC-cCCCCcChHHHHHHHHHH----------------------cCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 368 PLQ-FHFTKEPLMEEYSIAAQV----------------------WKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 368 Pl~-f~~T~epL~eEY~~aa~~----------------------~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
+.. ... ++.+|...+... .+++..+..++ +.|+....+.+
T Consensus 338 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~ 401 (492)
T 2paj_A 338 AASNEAA---DMISEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLD 401 (492)
T ss_dssp HHHCSCC---SHHHHHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCT
T ss_pred CCCCCCC---CHHHHHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCC
Confidence 874 233 578888765421 24888887666 57999988875
No 19
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=97.62 E-value=5.4e-05 Score=76.20 Aligned_cols=154 Identities=12% Similarity=0.049 Sum_probs=102.8
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccch
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTI 265 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~ 265 (480)
.++..+......| +++|+.. ..||.+. ..+..++ .+.++|.|+..+
T Consensus 204 ~~~e~l~~~~~~A---------~~~g~~v---~~H~~~~---~~i~~~~~~g~~~i~H~~~~------------------ 250 (403)
T 3gnh_A 204 LTYEEMKAVVDEA---------HMAGIKV---AAHAHGA---SGIREAVRAGVDTIEHASLV------------------ 250 (403)
T ss_dssp SCHHHHHHHHHHH---------HHTTCEE---EEEECSH---HHHHHHHHTTCSEEEECTTC------------------
T ss_pred CCHHHHHHHHHHH---------HHCCCEE---EEEeCCH---HHHHHHHHhCCCEEecCCcC------------------
Confidence 4667788888888 8888776 9999765 4566666 789999999872
Q ss_pred hhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchH-HhhhhhhhhcccCCCCCCcccc
Q psy8141 266 QHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPE-YLARGLVVRIAMSPLSNNSLFL 344 (480)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 344 (480)
++....++...++.+..||.++..+.........++ .....- ...
T Consensus 251 ---------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 296 (403)
T 3gnh_A 251 ---------------------DDEGIKLAVQKGAYFSMDIYNTDYTQAEGKKNGVLEDNLRKDR-------------DIG 296 (403)
T ss_dssp ---------------------CHHHHHHHHHHTCEEECCCSTHHHHHHHHHHHTCCHHHHHHHH-------------HHH
T ss_pred ---------------------CHHHHHHHHHCCCEEEeeechhhhhhhhccccCCCHHHHHHHH-------------HHH
Confidence 455556777789999999876643311000000000 000000 000
Q ss_pred cccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 345 NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 345 sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
.....|++.+++.|++|+++||.|...+. ++..|+..+.+ .+++..++.++ ..|+.+..+.++
T Consensus 297 ~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~---~~~~e~~~~~~-~gl~~~~al~~aT~~~A~~lg~~~ 360 (403)
T 3gnh_A 297 ELQRENFRKALKAGVKMVYGTDAGIYPHG---DNAKQFAVMVR-YGATPLQAIQSATLTAAEALGRSK 360 (403)
T ss_dssp HHHHHHHHHHHHHTCEEECCCCBTTBCTT---CGGGHHHHHHH-TTCCHHHHHHHTTHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHCCCeEEEecCCCCCCCC---chHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 12235899999999999999999976554 45678776554 59999997655 678888888765
No 20
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=97.60 E-value=2.4e-05 Score=79.26 Aligned_cols=137 Identities=16% Similarity=0.106 Sum_probs=95.4
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccch
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTI 265 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~ 265 (480)
.++..+......| ++.|+.. ..||.+. +.+..++ .+.++|.|+..+
T Consensus 209 ~~~e~l~~~~~~A---------~~~g~~v---~~H~~~~---~~i~~~l~~g~~~i~H~~~~------------------ 255 (423)
T 3feq_A 209 YSEDEIRAIVDEA---------EAANTYV---MAHAYTG---RAIARAVRCGVRTIEHGNLV------------------ 255 (423)
T ss_dssp SCHHHHHHHHHHH---------HHTTCCE---EEEEEEH---HHHHHHHHHTCCEEEEEEEC------------------
T ss_pred CCHHHHHHHHHHH---------HHCCCeE---EEEeCCh---HHHHHHHHcCCCEEeccCcC------------------
Confidence 4667788888888 8889776 9999854 5566666 899999999873
Q ss_pred hhhhhhchhhhhccccccccCChHHHHHHHHccCee-----------------eEccCCchhhccccCCCCchHHhhhhh
Q psy8141 266 QHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGI-----------------AMSPLSNNSLFLNYHRNPLPEYLARGL 328 (480)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~i-----------------evcPlSN~~l~~~~~~~~~~~~~~~~~ 328 (480)
++....++...++.+ .+||.||..++.
T Consensus 256 ---------------------~~~~~~~l~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~--------------- 299 (423)
T 3feq_A 256 ---------------------DEAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMPPESVAKVAS--------------- 299 (423)
T ss_dssp ---------------------CHHHHHHHHHHTCEEECCTHHHHHHHHHTGGGTCCTTTSSTHHH---------------
T ss_pred ---------------------CHHHHHHHHHCCCccccchHHHHHHHhcccccCCCHHHHHHHHH---------------
Confidence 233333344444444 456666654422
Q ss_pred hhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHc
Q psy8141 329 VVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMS 407 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~e-LarNSv~~S 407 (480)
.......|++.+++.|++|+++||.|...+. .+..|+....+. ++..+..+ ...|+....
T Consensus 300 --------------~~~~~~~~~~~l~~~Gv~v~~gTD~~~~~~~---~~~~e~~~~~~~--ls~~eal~~aT~~~A~~l 360 (423)
T 3feq_A 300 --------------VQQKGRESLEIYANAGVKMGFGSDLLGEMHA---FQSGEFRIRAEV--LGNLEALRSATTVAAEIV 360 (423)
T ss_dssp --------------HHHHHHHHHHHHHHHTCCBCCCCCCCGGGGG---GTTHHHHHHHTT--SCHHHHHHTTTHHHHHHT
T ss_pred --------------HHHHHHHHHHHHHHCCCEEEECCCCCCCCCc---chHHHHHHHHhh--CCHHHHHHHHHHHHHHHh
Confidence 0112347899999999999999999865443 256788776553 99998655 556999888
Q ss_pred CCCh
Q psy8141 408 GFPH 411 (480)
Q Consensus 408 ~~~~ 411 (480)
+.++
T Consensus 361 g~~~ 364 (423)
T 3feq_A 361 NMQG 364 (423)
T ss_dssp TCBT
T ss_pred CCCC
Confidence 8765
No 21
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=97.59 E-value=0.00048 Score=70.07 Aligned_cols=140 Identities=17% Similarity=0.039 Sum_probs=100.3
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchh
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQ 266 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~ 266 (480)
++.........| +++|+.. ..|+.|......+..+. .+..+|.|+..+
T Consensus 228 ~~e~l~~~~~~a---------~~~g~~v---~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~------------------- 276 (421)
T 2bb0_A 228 TVSQSRRYLQKA---------AEAGFGL---KIHADEIDPLGGAELAGKLKAVSADHLVGT------------------- 276 (421)
T ss_dssp CHHHHHHHHHHH---------HHTTCEE---EEEECSSSCCSHHHHHHHTTCSEEEECTTC-------------------
T ss_pred CHHHHHHHHHHH---------HHCCCCE---EEEeccccccCHHHHHHHcCCcEEhhhhcC-------------------
Confidence 455666666666 7888765 99998765433333233 566778888762
Q ss_pred hhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccc
Q psy8141 267 HLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNY 346 (480)
Q Consensus 267 ~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy 346 (480)
+|....++...++.+.+||.+|..++..
T Consensus 277 --------------------~~~~i~~~~~~g~~~~~~p~~~~~l~~~-------------------------------- 304 (421)
T 2bb0_A 277 --------------------SDEGIKKLAEAGTIAVLLPGTTFYLGKS-------------------------------- 304 (421)
T ss_dssp --------------------CHHHHHHHHHHTCEEEECHHHHHHTTCC--------------------------------
T ss_pred --------------------CHHHHHHHHHcCCeEEECCchhhhhccc--------------------------------
Confidence 4555556677899999999998765221
Q ss_pred cCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 347 HRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 347 ~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
.-.|++.+++.|++|+++||.+.-+.. ...+..+...+....+++..+..++ +.|+..+.+.++
T Consensus 305 ~~~~~~~~~~~Gv~v~lgtD~~~~~~~-~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~ 369 (421)
T 2bb0_A 305 TYARARAMIDEGVCVSLATDFNPGSSP-TENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGE 369 (421)
T ss_dssp CCCCHHHHHHTTCCEEECCCBBTTTBC-CCCHHHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred ccchHHHHHHCCCeEEEeCCCCCCCCc-ccCHHHHHHHHhcccCCCHHHHHHHHHHHHHHHhCccC
Confidence 135999999999999999997642211 1248888888888889999997666 679999988765
No 22
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=97.56 E-value=0.00039 Score=71.26 Aligned_cols=85 Identities=22% Similarity=0.174 Sum_probs=63.9
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDD 367 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDD 367 (480)
+....+....++.+++||.||..++. ...|++.+++.|++++|+||.
T Consensus 275 ~~~~~~l~~~g~~~~~~p~~~~~l~~---------------------------------~~~~~~~~~~~Gv~~~lgtD~ 321 (439)
T 2i9u_A 275 KEEINLIKRNNVTIVHCPTSNFNLGS---------------------------------GMMPVRKYLNLGINVVLGSDI 321 (439)
T ss_dssp HHHHHHHHHTTCEEEECHHHHHHTTC---------------------------------CCCCHHHHHHTTCEEEECCCB
T ss_pred HHHHHHHHHcCCEEEECccchhhccc---------------------------------ccCCHHHHHHCCCcEEEecCC
Confidence 44445566779999999999876421 236899999999999999999
Q ss_pred ccCcCCCCcChHHHHHHHHHH------------cCCCHHHHHHH-HHHHHHHcC
Q psy8141 368 PLQFHFTKEPLMEEYSIAAQV------------WKLSSCDMCEL-ARNSVLMSG 408 (480)
Q Consensus 368 Pl~f~~T~epL~eEY~~aa~~------------~~Ls~~Dl~eL-arNSv~~S~ 408 (480)
+.... .++.+|+..+... .+++..++.++ +.|+....+
T Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 372 (439)
T 2i9u_A 322 SAGHT---CSLFKVIAYAIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFFG 372 (439)
T ss_dssp TTBCC---SCHHHHHHHHHHHHHHHHHHTTSCSCCCCHHHHHHHHTHHHHTTTS
T ss_pred CCCCC---cCHHHHHHHHHHHhccccccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 86332 2588888776632 68999997665 578877766
No 23
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=97.55 E-value=7.1e-05 Score=76.52 Aligned_cols=137 Identities=15% Similarity=0.068 Sum_probs=94.4
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccch
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTI 265 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~ 265 (480)
.++..+......| +++|+.. ..||.+. +.+..++ .+.++|.|+..+
T Consensus 212 ~~~e~l~~~~~~A---------~~~g~~v---~~H~~~~---~~i~~al~~G~~~i~H~~~~------------------ 258 (426)
T 2r8c_A 212 YSEDEIRAIVAEA---------QGRGTYV---LAHAYTP---AAIARAVRCGVRTIEHGNLI------------------ 258 (426)
T ss_dssp SCHHHHHHHHHHH---------HHTTCCE---EEEECSH---HHHHHHHHTTCSEEEECTTC------------------
T ss_pred CCHHHHHHHHHHH---------HHcCCEE---EEEeCCh---HHHHHHHHcCCCEEecCCcC------------------
Confidence 4677788888888 8889776 9999854 5667777 899999999873
Q ss_pred hhhhhhchhhhhccccccccCChHHHHHHHHccCee-----------------eEccCCchhhccccCCCCchHHhhhhh
Q psy8141 266 QHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGI-----------------AMSPLSNNSLFLNYHRNPLPEYLARGL 328 (480)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~i-----------------evcPlSN~~l~~~~~~~~~~~~~~~~~ 328 (480)
++....++...++.+ .+||.||..++.
T Consensus 259 ---------------------~~~~~~~~~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~--------------- 302 (426)
T 2r8c_A 259 ---------------------DDETARLVAEHGAYVVPTLVTYDALASEGEKYGLPPESIAKIAD--------------- 302 (426)
T ss_dssp ---------------------CHHHHHHHHHTTCEEECCTHHHHHHHHHTTTTTCCHHHHTTSTT---------------
T ss_pred ---------------------CHHHHHHHHHcCCeEeechHHHHHHhhhccccCCCHHHHHHHHH---------------
Confidence 233333444445444 334444433211
Q ss_pred hhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHc
Q psy8141 329 VVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMS 407 (480)
Q Consensus 329 ~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S 407 (480)
.......|++.+++.|++|+++||.|...+. .+..|+....+. ++..+..++ ..|+.+..
T Consensus 303 --------------~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~~---~~~~e~~~~~~~--l~~~eal~~aT~~~A~~l 363 (426)
T 2r8c_A 303 --------------VHGAGLHSIEIMKRAGVKMGFGTDLLGEAQR---LQSDEFRILAEV--LSPAEVIASATIVSAEVL 363 (426)
T ss_dssp --------------TGGGHHHHHHHHHHTTCEECCCCCCCGGGGG---GTTHHHHHHTTT--SCHHHHHHHTTHHHHHHT
T ss_pred --------------HHHHHHHHHHHHHHcCCeEEEecCCCCCCCc---chHHHHHHHHhc--CCHHHHHHHHHHHHHHHh
Confidence 1123457899999999999999999865443 255777766543 999997665 56999988
Q ss_pred CCCh
Q psy8141 408 GFPH 411 (480)
Q Consensus 408 ~~~~ 411 (480)
+.++
T Consensus 364 g~~~ 367 (426)
T 2r8c_A 364 GMQD 367 (426)
T ss_dssp TCTT
T ss_pred CCCC
Confidence 8775
No 24
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=97.52 E-value=0.0024 Score=65.84 Aligned_cols=85 Identities=11% Similarity=-0.008 Sum_probs=62.6
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++.-..++...++.+.+||.||..++. .-.|++.+++.|++|+++||
T Consensus 283 ~~~~~~~l~~~g~~~~~~p~s~~~l~~---------------------------------~~~~~~~~~~~Gv~v~lgtD 329 (458)
T 4f0l_A 283 SDEETKHMAKAGAIAGLCPVTEANLGD---------------------------------GTFNATEFAAAGGKFGIGSD 329 (458)
T ss_dssp CHHHHHHHHHHTCEEEECHHHHHHTTC---------------------------------CCCCHHHHHHTTCEEEECCB
T ss_pred CHHHHHHHHHcCCeEEECccccccccC---------------------------------CCccHHHHHHCCCeEEEECC
Confidence 344445667789999999999987643 23699999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHHHc--------------CCCHHHHHHH-HHHHHHHcCC
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQVW--------------KLSSCDMCEL-ARNSVLMSGF 409 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~~~--------------~Ls~~Dl~eL-arNSv~~S~~ 409 (480)
.+ .+. ++.+|...+.... +++..++.++ ..|+..+.+.
T Consensus 330 ~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~ 382 (458)
T 4f0l_A 330 SN--VLI---GIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR 382 (458)
T ss_dssp TT--SSC---CHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC
T ss_pred CC--CCC---CHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC
Confidence 42 222 4778877665332 3788887664 5688888887
No 25
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=97.41 E-value=0.0012 Score=66.94 Aligned_cols=140 Identities=14% Similarity=0.072 Sum_probs=98.9
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchh
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQ 266 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~ 266 (480)
++.........| +++|+.. ..|+.+....+.+..+. .+..+|.|+..+
T Consensus 233 ~~~~~~~~~~~a---------~~~g~~v---~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~------------------- 281 (419)
T 2puz_A 233 SVKEIDRVFAAA---------QQRGLPV---KLHAEQLSNLGGAELAASYNALSADHLEYL------------------- 281 (419)
T ss_dssp CHHHHHHHHHHH---------HHTTCCB---EEEESSSSCCSHHHHHHHTTCSEEEECTTC-------------------
T ss_pred CHHHHHHHHHHH---------HHCCCcE---EEEecccccCCHHHHHHhcCCceehHhccC-------------------
Confidence 445555666666 7888765 88998765433443344 566778888772
Q ss_pred hhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccc
Q psy8141 267 HLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNY 346 (480)
Q Consensus 267 ~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy 346 (480)
++....++...++.+.+||.+|..+.. -
T Consensus 282 --------------------~~~~~~~~~~~g~~~~~~p~~~~~l~~--------------------------------~ 309 (419)
T 2puz_A 282 --------------------DETGAKALAKAGTVAVLLPGAFYALRE--------------------------------K 309 (419)
T ss_dssp --------------------CHHHHHHHHHHTCEEEECHHHHHHHTC--------------------------------C
T ss_pred --------------------CHHHHHHHHHcCCcEEECCchhhhhcc--------------------------------c
Confidence 344444566788999999998875521 1
Q ss_pred cCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 347 HRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 347 ~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
...|++.+++.|++++++||.+..... ...+..+...+....+++..+..++ +.|+..+.+.++
T Consensus 310 ~~~~~~~~~~~Gv~~~lgsD~~~~~~~-~~~l~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~~~ 374 (419)
T 2puz_A 310 QLPPVQALRDAGAEIALATDCNPGTSP-LTSLLLTMNMGATLFRMTVEECLTATTRNAAKALGLLA 374 (419)
T ss_dssp CCCCHHHHHHHTCCEEECCCCCSSSCC-BCCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred ccccHHHHHHCCCeEEEECCCCCCCCc-cccHHHHHHHhccccCCCHHHHHHHHHHHHHHHcCCCC
Confidence 125999999999999999998642210 1258888888877789999997665 679999888764
No 26
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=97.38 E-value=0.00035 Score=71.43 Aligned_cols=97 Identities=18% Similarity=0.224 Sum_probs=62.1
Q ss_pred HHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCCCcc
Q psy8141 290 LQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPL 369 (480)
Q Consensus 290 L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl 369 (480)
....+...++.+++||.||..+.... ...| ..-...|+..+++.|++++++||.+.
T Consensus 265 ~i~~~~~~gv~v~~~p~~~~~~~~~~-----------------~~~p-------~~~~~~~~~~~~~~Gv~~~lgTD~~~ 320 (430)
T 1ra0_A 265 LFRLLKMSGINFVANPLVNIHLQGRF-----------------DTYP-------KRRGITRVKEMLESGINVCFGHDGVF 320 (430)
T ss_dssp HHHHHHHHTCEEEECHHHHHHHTTTT-----------------CCSS-------CCCCCCCHHHHHHTTCCEEECCBCSS
T ss_pred HHHHHHHcCCEEEECchhhhhhcccc-----------------CCCC-------CcCCCCCHHHHHHCCCEEEEeCCCCc
Confidence 44456678999999999987653210 0000 01134789999999999999999975
Q ss_pred C-c-CCCCcChHHHHHHHHHHcCC----CHHHH-HHHHHHHHHHcCCC
Q psy8141 370 Q-F-HFTKEPLMEEYSIAAQVWKL----SSCDM-CELARNSVLMSGFP 410 (480)
Q Consensus 370 ~-f-~~T~epL~eEY~~aa~~~~L----s~~Dl-~eLarNSv~~S~~~ 410 (480)
. + ..+...+.+|...+....++ +..++ .-.+.|+....+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~ 368 (430)
T 1ra0_A 321 DPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQ 368 (430)
T ss_dssp BTTBSCCCCCHHHHHHHHHHHTTCCSHHHHHGGGGGGTHHHHHHTTCS
T ss_pred ccCCCCCCCCHHHHHHHHHHHHccCCcccHHHHHHHHHHHHHHHhCCC
Confidence 1 1 11123588888877766543 44443 33456777777765
No 27
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=97.32 E-value=0.00092 Score=68.37 Aligned_cols=88 Identities=22% Similarity=0.154 Sum_probs=65.2
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++....+....++.+++||.||..++. ...|++.+++.|++++|+||
T Consensus 308 ~~~~i~~l~~~g~~~~~~p~~~~~~~~---------------------------------~~~~l~~~~~~Gv~~~lgtD 354 (420)
T 2imr_A 308 TPDDIARVARAGCAVVTCPRSNHHLEC---------------------------------GTFDWPAFAAAGVEVALGTD 354 (420)
T ss_dssp CHHHHHHHHHHTCCEEECHHHHHHTTC---------------------------------CCCCHHHHHHTTCCEEECCC
T ss_pred CHHHHHHHHHcCCeEEECHHHHHHhcc---------------------------------CCCCHHHHHHCCCeEEEECC
Confidence 344445556678999999998875421 23699999999999999999
Q ss_pred CccC-cCCCCcChHHHHHHHHHH-cCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 367 DPLQ-FHFTKEPLMEEYSIAAQV-WKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 367 DPl~-f~~T~epL~eEY~~aa~~-~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
.+.. ... .+.+|+..+.+. .+++..++.++ +.|+.+..+.+
T Consensus 355 ~~~~~~~~---~~~~~~~~~~~~~~~ls~~~al~~aT~n~A~~lgl~ 398 (420)
T 2imr_A 355 SVASGETL---NVREEVTFARQLYPGLDPRVLVRAAVKGGQRVVGGR 398 (420)
T ss_dssp CHHHHSCS---CTHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHC--
T ss_pred CCccCCCC---CHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 9753 232 478899888764 58999998655 67888887764
No 28
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=97.32 E-value=0.00054 Score=69.63 Aligned_cols=153 Identities=10% Similarity=0.059 Sum_probs=94.7
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccch
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTI 265 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~ 265 (480)
.++..+...+..| ++.|+.. ..||.+. ..+..++ .+.++|.||..+
T Consensus 213 ~~~~~l~~~~~~A---------~~~g~~v---~~H~~~~---~~i~~~~~~g~~~i~H~~~~------------------ 259 (418)
T 2qs8_A 213 FTQEEVDAVVSAA---------KDYGMWV---AVHAHGA---EGMKRAIKAGVDSIEHGTFM------------------ 259 (418)
T ss_dssp SCHHHHHHHHHHH---------HHTTCEE---EEEECSH---HHHHHHHHHTCSEEEECTTC------------------
T ss_pred CCHHHHHHHHHHH---------HHcCCEE---EEEECCH---HHHHHHHHcCCCEEEECCCC------------------
Confidence 4566778888888 8888776 9999753 4455566 788999999872
Q ss_pred hhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCC-Ccc--
Q psy8141 266 QHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSN-NSL-- 342 (480)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 342 (480)
++....++..+++. +||.....-... ..+...+ +.|..- +..
T Consensus 260 ---------------------~~~~i~~l~~~gv~--v~p~~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~ 304 (418)
T 2qs8_A 260 ---------------------DLEAMDLMIENGTY--YVPTISAGEFVA----------EKSKIDN--FFPEIVRPKAAS 304 (418)
T ss_dssp ---------------------CHHHHHHHHHHTCE--EECCHHHHHHHH----------HHTTSTT--SSCTTTHHHHHH
T ss_pred ---------------------CHHHHHHHHHCCCE--EeeeechHHHhh----------hhccccC--CCHHHHHHHHHH
Confidence 34444455556654 688742110000 0000000 000000 000
Q ss_pred cccccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 343 FLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 343 ~~sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
.......|++.+++.|++|+++||.|...+. .+.+|+..+.+. +++..++.++ +.|+....+.++
T Consensus 305 ~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~---~~~~e~~~~~~~-gls~~eal~~~T~n~A~~lg~~~ 370 (418)
T 2qs8_A 305 VGPQISDTFRKAYEKGVKIAFGTDAGVQKHG---TNWKEFVYMVEN-GMPAMKAIQSATMETAKLLRIED 370 (418)
T ss_dssp HHHHHHHHHHHHHHHTCCBCCCCCBTTBCTT---CTTHHHHHHHHT-TCCHHHHHHHTTHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCCCCcCCcc---hHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCCC
Confidence 0000136899999999999999999863222 367888876665 9999997665 689999988765
No 29
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=97.21 E-value=0.00091 Score=67.52 Aligned_cols=153 Identities=8% Similarity=0.083 Sum_probs=95.6
Q ss_pred CChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccch
Q psy8141 187 NPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTI 265 (480)
Q Consensus 187 ~Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~ 265 (480)
.++..+......| ++.|+.. ..||.+. ..+..++ .+.++|.||...
T Consensus 203 ~~~~~l~~~~~~A---------~~~g~~v---~~H~~~~---~~i~~~~~~g~~~i~H~~~~------------------ 249 (408)
T 3be7_A 203 FTLEEMKAIVDEA---------HNHGMKV---AAHAHGL---IGIKAAIKAGVDSVEHASFI------------------ 249 (408)
T ss_dssp SCHHHHHHHHHHH---------HHTTCEE---EEEECSH---HHHHHHHHHTCSEEEECTTC------------------
T ss_pred CCHHHHHHHHHHH---------HHCCCEE---EEEeCCH---HHHHHHHHcCCCEEEECCCC------------------
Confidence 3556677777777 8888765 9999875 3455555 788999999872
Q ss_pred hhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHH-hhhhhhhhcccCCCCCCcccc
Q psy8141 266 QHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEY-LARGLVVRIAMSPLSNNSLFL 344 (480)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 344 (480)
++....++...++.+..+|+++..+........+++. ...... ..
T Consensus 250 ---------------------~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 295 (408)
T 3be7_A 250 ---------------------DDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERL-------------VG 295 (408)
T ss_dssp ---------------------CHHHHHHHHHTTCEEECCCSTHHHHHTTTTTTTCCHHHHHHHHH-------------HH
T ss_pred ---------------------CHHHHHHHHHCCCEEeeeecHHHHhhhhccccCCCHHHHHHHHH-------------HH
Confidence 4556556666777775555444322110000000100 000000 00
Q ss_pred cccCCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 345 NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 345 sy~~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
.....|+..+++.|++++++||.|...+. .+..|+..+.+. +++..++.++ +.|+.+..+.+
T Consensus 296 ~~~~~~~~~~~~~Gv~~~~gTD~~~~p~~---~~~~~~~~~~~~-gls~~~al~~~T~n~A~~lgl~ 358 (408)
T 3be7_A 296 KKQRENFMNAHRRGAIITFGTDAGIFDHG---DNAKQFAYMVEW-GMTPLEAIQASTIKTATLFGIE 358 (408)
T ss_dssp HHHHHHHHHHHHHTCCEECCCCBTTBCTT---CGGGHHHHHHHT-TCCHHHHHHTTTHHHHHHHTCS
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCc---hHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCC
Confidence 01136899999999999999999863222 366788777665 9999997555 68998888875
No 30
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=97.11 E-value=0.0015 Score=68.12 Aligned_cols=88 Identities=16% Similarity=-0.091 Sum_probs=64.0
Q ss_pred hHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCc--EEEcC
Q psy8141 288 PVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLV--VSLST 365 (480)
Q Consensus 288 p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~--VsLsT 365 (480)
+....++...++.+++||.||..++. ...|+..+++.|++ ++|+|
T Consensus 279 ~~~i~~~~~~g~~~~~~P~~~~~l~~---------------------------------~~~~~~~~~~~Gv~~~~~lgT 325 (475)
T 2ood_A 279 NNEFRRMSKKGAAVVFCPCSNLFLGS---------------------------------GLFRLGRATDPEHRVKMSFGT 325 (475)
T ss_dssp HHHHHHHHHHTCEEEECHHHHHHTTC---------------------------------CCCCHHHHTCTTSCCEEEECC
T ss_pred HHHHHHHHHcCCEEEEChhhhhhccc---------------------------------CcCCHHHHHhCCCCCcEEEEc
Confidence 34445566679999999999876532 24699999999999 99999
Q ss_pred CCccCcCCCCcChHHHHHHHHHH------------------------cCCCHHHHHH-HHHHHHHHcCCCh
Q psy8141 366 DDPLQFHFTKEPLMEEYSIAAQV------------------------WKLSSCDMCE-LARNSVLMSGFPH 411 (480)
Q Consensus 366 DDPl~f~~T~epL~eEY~~aa~~------------------------~~Ls~~Dl~e-LarNSv~~S~~~~ 411 (480)
|.+..... .+.+|...+... .+++..++.+ .+.|+.+..+.++
T Consensus 326 D~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 393 (475)
T 2ood_A 326 DVGGGNRF---SMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDD 393 (475)
T ss_dssp CBTTBSCC---CHHHHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTT
T ss_pred cCCCCCCc---CHHHHHHHHHHHhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 99763332 366666555322 5789999654 4679999888764
No 31
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=96.84 E-value=0.0043 Score=62.29 Aligned_cols=142 Identities=15% Similarity=0.117 Sum_probs=88.0
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCCCh--h---hHHHHh--hcc---cccccccccccccchhhhh
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPI--Q---HLVCGF--MMA---ENISHGLLLRKAPVLQYLY 257 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~~~--~---~l~~a~--l~a---~RIgHG~~l~~~~~~~~~~ 257 (480)
++..+......| +++|+.. ..|+.|.... . .+.+.. .+. .+|.|+..+....
T Consensus 196 ~~~~l~~~~~~A---------~~~g~~v---~~H~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~------ 257 (403)
T 2qt3_A 196 VEGSLDLCFKLA---------KEYDVDI---DYHIHDIGTVGVYSINRLAQKTIENGYKGRVTTSHAWCFADAP------ 257 (403)
T ss_dssp HHHHHHHHHHHH---------HHTTCEE---EEEECCCHHHHHHHHHHHHHHHHHTTCTTSEEEEECTHHHHSC------
T ss_pred hHHHHHHHHHHH---------HHcCCCe---EEEeCCcccchhHHHHHHHHHHHHcCCCCCeEEEehhhhccCC------
Confidence 446677777777 8888765 9999987431 1 112211 232 5677776621100
Q ss_pred hhhcccchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCC
Q psy8141 258 YLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPL 337 (480)
Q Consensus 258 ~~~~~g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (480)
-...+....++...++.+.+||.+..
T Consensus 258 --------------------------~~~~~~~~~~l~~~g~~v~~~p~~~~---------------------------- 283 (403)
T 2qt3_A 258 --------------------------SEWLDEAIPLYKDSGMKFVTCFSSTP---------------------------- 283 (403)
T ss_dssp --------------------------HHHHHHHHHHHHHHTCEEEEETTTCC----------------------------
T ss_pred --------------------------hhhHHHHHHHHHHcCCEEEECCCCCC----------------------------
Confidence 00002444566678999999996421
Q ss_pred CCCcccccccCCchHHHHHCCCcEEEcCCCccC-c-CCCCcChHHHHHHHHHHcCC----CHHHH-HHHHHHHHHHcCCC
Q psy8141 338 SNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQ-F-HFTKEPLMEEYSIAAQVWKL----SSCDM-CELARNSVLMSGFP 410 (480)
Q Consensus 338 ~~~~~~~sy~~hP~~~l~~~Gl~VsLsTDDPl~-f-~~T~epL~eEY~~aa~~~~L----s~~Dl-~eLarNSv~~S~~~ 410 (480)
...|++.+++.|++|+++||+|.. + ......+.+|...+....++ +..+. ...+.|+....+.+
T Consensus 284 ---------~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~ 354 (403)
T 2qt3_A 284 ---------PTMPVIKLLEAGINLGCASDNIRDFWVPFGNGDMVQGALIETQRLELKTNRDLGLIWKMITSEGARVLGIE 354 (403)
T ss_dssp ---------TTCCHHHHHHTTCEEEEECCSCSSSSCSCCCCCHHHHHHHHHHHTTCCSHHHHHHHHHHTTHHHHHHHTCG
T ss_pred ---------CCCCHHHHHHcCCcEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCccCHHHHHHHHHHHHHHhcCCC
Confidence 236999999999999999999841 1 11112577888877766664 44454 34457888887765
No 32
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=96.53 E-value=0.012 Score=58.82 Aligned_cols=140 Identities=11% Similarity=-0.091 Sum_probs=89.2
Q ss_pred ChHhHHHHHHHHhhhhhhHHHHHCCCCCCCcccccCCCC----ChhhHHHHh-hcccccccccccccccchhhhhhhhcc
Q psy8141 188 PCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAG----PIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQI 262 (480)
Q Consensus 188 Pp~~f~~yy~~Anl~~LN~~r~~~gl~~~~l~~HaGE~~----~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~ 262 (480)
++..+...+..| ++.|+.. ..||+|.. ..+.+..++ .+++.|.|+....
T Consensus 172 ~~~~l~~~~~~a---------~~~g~~v---~~H~~~~~~~~~~~~~i~~~~~~G~~~i~H~~~~~-------------- 225 (386)
T 2vun_A 172 NPEDAAPMVEWA---------HKHGFKV---QMHTGGTSIPGSSTVTADDVIKTKPDVVSHINGGP-------------- 225 (386)
T ss_dssp SHHHHHHHHHHH---------HHTTCEE---EEECSCCSCSTTCSCCHHHHHHHCCSEEETTTCSS--------------
T ss_pred CHHHHHHHHHHH---------HHCCCeE---EEecCCccccccCHHHHHHHHHcCCCEEEEccCCC--------------
Confidence 455677777777 8888765 89998642 334555566 7888899976510
Q ss_pred cchhhhhhhchhhhhccccccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcc
Q psy8141 263 GTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSL 342 (480)
Q Consensus 263 g~~~~~~~~~l~~~~~~~~~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (480)
-..++.....+...++.+..|+. +-...
T Consensus 226 ---------------------~~~~~~~~~~~~~~g~~vl~~~~-~g~~~------------------------------ 253 (386)
T 2vun_A 226 ---------------------TAISVQEVDRIMDETDFAMEIVQ-CGNPK------------------------------ 253 (386)
T ss_dssp ---------------------SCCCHHHHHHHHHHCCCEEEEES-SSCHH------------------------------
T ss_pred ---------------------CCCCHHHHHHHHHcCCeEEEecc-CCccc------------------------------
Confidence 01234444455556776622222 11010
Q ss_pred cccccCCchHHHHHCCC--cEEEcCCCccCc-CCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCC
Q psy8141 343 FLNYHRNPLPEYLARGL--VVSLSTDDPLQF-HFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGF 409 (480)
Q Consensus 343 ~~sy~~hP~~~l~~~Gl--~VsLsTDDPl~f-~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~ 409 (480)
....|+..+++.|+ +++|+||.|.-+ ......+..|+..+.+ .+++..++.++ +.|+.+.-++
T Consensus 254 ---~~~~~~~~~~~~g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~~~-~~ls~~~~~~~~T~n~A~~lgl 320 (386)
T 2vun_A 254 ---IADYVARRAAEKGQLGRVIFGNDAPSGTGLIPLGILRNMCQIASM-SDIDPEVAVCMATGNSTAVYGL 320 (386)
T ss_dssp ---HHHHHHHHHHHHTCGGGEEEECCBSBTTBBCTTHHHHHHHHHHHH-SCCCHHHHHHHHTHHHHHHHTC
T ss_pred ---ccHHHHHHHHHcCCCceeEEecCCCCCCCCCcchhHHHHHHHHhh-cCCCHHHHHHHHhHHHHHHcCC
Confidence 12358899999999 999999997322 1111236778776644 69999998777 6788887776
No 33
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=96.28 E-value=0.017 Score=59.43 Aligned_cols=87 Identities=16% Similarity=0.019 Sum_probs=58.6
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
++.-..++...++.+.+||.||..++.. ..|++.| +|++|+++||
T Consensus 262 ~~~~~~~l~~~g~~~~~~p~s~~~~~~~---------------------------------~~~~~~~--~Gv~v~lgtD 306 (427)
T 3v7p_A 262 NEEEIQTIASYNAHIIHCPISNRLLGNG---------------------------------VLDLEKI--KSIPYAIATD 306 (427)
T ss_dssp CHHHHHHHHHSEEEEEECHHHHHHTTCC---------------------------------CCCTTTT--TTSCEEECCC
T ss_pred CHHHHHHHHHcCCEEEECHHHHHHhcCC---------------------------------CCCHHHH--CCCeEEEeCC
Confidence 3444456677899999999999876432 2477888 9999999999
Q ss_pred CccCcCCCCcChHHHHHHHHHHcC-----CCHHHHHH-HHHHHHHHcCCC
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQVWK-----LSSCDMCE-LARNSVLMSGFP 410 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~~~~-----Ls~~Dl~e-LarNSv~~S~~~ 410 (480)
.+.-... ..+.+|...+..... ++..++.+ ...|+...-+.+
T Consensus 307 ~~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~ 354 (427)
T 3v7p_A 307 GLSSNYS--LNMYEELKAALFVHPNKEATTFAKELIIRATKAGYDALGFE 354 (427)
T ss_dssp CTTSCSC--CCHHHHHHHHHHHSTTSCHHHHHHHHHHHHTHHHHHHHTCS
T ss_pred CCCCCCC--CCHHHHHHHHHHhccCCCcccCHHHHHHHHHHHHHHHhCCC
Confidence 7653222 258899988776643 22344333 345666666653
No 34
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=96.27 E-value=0.0051 Score=62.12 Aligned_cols=61 Identities=20% Similarity=0.255 Sum_probs=47.5
Q ss_pred CCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHH------HcCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 348 RNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQ------VWKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 348 ~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~------~~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
..|+..+++.|++++++||.+..... .++.+|...+.. ..+++..++.++ +.|+.+..+.+
T Consensus 261 ~~~~~~~~~~Gv~~~lgtD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 328 (406)
T 1p1m_A 261 IAPVQRMIEHGMKVTLGTDGAASNNS--LNLFFEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGFK 328 (406)
T ss_dssp CCCHHHHHHTTCEEEECCCCTTTTSC--CCHHHHHHHHHHHHHTTCTTSSCHHHHHHHHTHHHHHHHTCS
T ss_pred cCcHHHHHhCCCeEEEECCCCcCCCC--CCHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 36899999999999999999875432 257788877654 247999998776 57988888875
No 35
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=95.96 E-value=0.025 Score=58.10 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=47.8
Q ss_pred CCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 348 RNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 348 ~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
..|+..+++.|++++++||.+.-+... ..+..|+..+.+..+++..++.++ +.|+.+..+.++
T Consensus 327 ~~~~~~~~~~Gv~~~~gtD~~~~~~~~-~~~~~e~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 390 (458)
T 2p9b_A 327 VSGARQAHEAGLMIGVGTDTGMTFVPQ-YATWRELELLVAYAGFSPAEALHAATAVNASILGVDA 390 (458)
T ss_dssp HHHHHHHHHTTCCBCCCCCTTSTTSCT-TCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHCCCeEEEecCCCCCCCcc-ccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCcC
Confidence 358899999999999999986422211 237788887776569999997666 679999888764
No 36
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=95.42 E-value=0.15 Score=54.69 Aligned_cols=253 Identities=12% Similarity=0.022 Sum_probs=139.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCceEE-EEEEeccCCChhhHHHHHHHHHHcccccceeeeecccccccChhhhHHHHhhHHH
Q psy8141 48 TISDLSNQKSEVAADLEESKYQNA-ELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQE 126 (480)
Q Consensus 48 t~~~la~l~~~vi~~l~~~~v~y~-Elr~s~~~~~~~e~~~la~w~~~~~~~~~~irwiv~i~R~~~~~~~~~~v~~f~~ 126 (480)
+.+...+.++..++.+.+.|+.-+ +..+. ...|+.+.+.. +.+....++...+.. +.+++
T Consensus 216 ~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~-----~~~~~~~~~l~-~~g~l~~rv~~~~~~-------------~~~~~ 276 (534)
T 3icj_A 216 TVKDYKHYIESAQEHLLSLGVHSVGFMSVG-----EKALKALFELE-REGRLKMNVFAYLSP-------------ELLDK 276 (534)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEEEEEEEEEC-----HHHHHHHHHHH-HTTCCCSEEEEEECG-------------GGHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEeCCCC-----HHHHHHHHHHH-hCCCCcEEEEEecCH-------------HHHHH
Confidence 667777888888999999998754 33332 34454443332 344455555433321 11222
Q ss_pred HHHHHhhhhHhhhcCCCCChhhhcccCceeeEeeccCCCCCCCCCC-CCCC-CCCcCCCCCCCChHhHHHHHHHHhhhhh
Q psy8141 127 ILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLF-DADV-LTPPQWNLEENPCYAYYQYYTYANLTVL 204 (480)
Q Consensus 127 ~L~~if~pL~~a~~~p~~~~~l~~fl~~VvGfDl~gdE~~~~~~~~-~~~~-~~P~~w~~~~~Pp~~f~~yy~~Anl~~L 204 (480)
+.+.. . +.. -..+ -++.|+.+..|-+...+... ...- ..|...-....++..+......|
T Consensus 277 ~~~~~--------~-~~~---~~~~-~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v~~A----- 338 (534)
T 3icj_A 277 LEELN--------L-GKF---EGRR-LRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERA----- 338 (534)
T ss_dssp HHHHT--------C-CSE---ECSS-EEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHHHHH-----
T ss_pred HHHhc--------c-ccC---CCCc-EEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHHHHH-----
Confidence 22210 0 000 0011 14777777765443221110 0000 01111111224666777777777
Q ss_pred hHHHHHCCCCCCCcccccCCCCChhhHHHHhh---cccccccccccccccchhhhhhhhcccchhhhhhhchhhhhcccc
Q psy8141 205 NHFRRARDLNTFVLRPHCGEAGPIQHLVCGFM---MAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHG 281 (480)
Q Consensus 205 N~~r~~~gl~~~~l~~HaGE~~~~~~l~~a~l---~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~ 281 (480)
+++|+.+ ..||.+....+...+++- ...+|.|+..+
T Consensus 339 ----~~~G~~v---~~Ha~gd~ai~~~l~a~~~~~~r~~ieH~~~~---------------------------------- 377 (534)
T 3icj_A 339 ----KPLGLDV---AVHAIGDKAVDVALDAFEEAEFSGRIEHASLV---------------------------------- 377 (534)
T ss_dssp ----TTTTCEE---EEEECSHHHHHHHHHHHHHHTCCCEEEECCBC----------------------------------
T ss_pred ----HHCCCEE---EEEEcChHHHHHHHHHHHhccCCCEEEECCCC----------------------------------
Confidence 7788765 999975433444444441 23789999873
Q ss_pred ccccCChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcE
Q psy8141 282 LLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVV 361 (480)
Q Consensus 282 ~~l~~~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~V 361 (480)
+|....++...++.+.+||.++..-.. .... .+. ...-...|++.|++. ++|
T Consensus 378 -----~~e~i~~la~~gv~~~~~P~~~~~~~~------~~~~--lg~--------------~r~~~~~p~~~l~~~-v~v 429 (534)
T 3icj_A 378 -----RDDQLERIKELKVRISAQPHFIVSDWW------IVNR--VGE--------------ERAKWAYRLKTLSSI-TKL 429 (534)
T ss_dssp -----CHHHHHHHHHHTCEEEECTTHHHHCTT------HHHH--HHH--------------HHGGGBTCHHHHHHH-SCE
T ss_pred -----CHHHHHHHHHcCCeEEEccccccchhH------HHHh--hCH--------------HHHhccHHHHHHHHh-CCE
Confidence 455555677789999999998753100 0000 000 000123599999999 999
Q ss_pred EEcCCCccCcCCCCcChHHHHHHHHH------HcCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 362 SLSTDDPLQFHFTKEPLMEEYSIAAQ------VWKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 362 sLsTDDPl~f~~T~epL~eEY~~aa~------~~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
+++||.|... . .|+ .+...+.. ..+++..+..++ ..|+....+.+
T Consensus 430 alGSD~p~~~-~--~p~-~~~~~av~r~~~~~~~~ls~~eaL~~~T~~~A~~lg~e 481 (534)
T 3icj_A 430 GFSTDSPIEP-A--DPW-VSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAE 481 (534)
T ss_dssp EECCTTTTSC-C--CHH-HHHHHHHHCCSSCGGGCCCHHHHHHHTTHHHHHHTTCT
T ss_pred EeecCCCCCC-C--CHH-HHHHHHHhccccCcccCCCHHHHHHHHHHHHHHHhCCC
Confidence 9999999642 2 244 44444443 357888886554 57888888865
No 37
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=88.24 E-value=2.1 Score=42.00 Aligned_cols=60 Identities=13% Similarity=-0.043 Sum_probs=40.7
Q ss_pred chHHHHHCC-CcEEEcCCCccC--cCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 350 PLPEYLARG-LVVSLSTDDPLQ--FHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 350 P~~~l~~~G-l~VsLsTDDPl~--f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
++..+++.| .++.|+||.+.. +......+..++..+.+ .+++.+++.++ +.|+.+.-+++
T Consensus 255 ~~~~~~~~G~~~~~l~TD~~~~~~~~~~~~~~~~~l~~~~~-~~ls~~~~~~~~T~n~A~~lgl~ 318 (379)
T 2ics_A 255 VAETALREGMKAASISTDIYIRNRENGPVYDLATTMEKLRV-VGYDWPEIIEKVTKAPAENFHLT 318 (379)
T ss_dssp HHHHHHHTTCCCSBCCCCBCHHHHHSSSCCCHHHHHHHHHH-HTCCHHHHHHTTTHHHHHHTTCT
T ss_pred HHHHHHHcCCCcceEeccCcccCCCCCcHhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCC
Confidence 578899999 899999997621 11111235566655544 48999998776 56888877764
No 38
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=86.63 E-value=1.9 Score=43.26 Aligned_cols=61 Identities=23% Similarity=0.178 Sum_probs=43.6
Q ss_pred CchHHHHHCC-CcEEEcCCCccCc--CCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 349 NPLPEYLARG-LVVSLSTDDPLQF--HFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 349 hP~~~l~~~G-l~VsLsTDDPl~f--~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
-|+..+++.| ++++|+||.+ .. ......+...+..+.+ .+++..++.++ +.|+.+.-++++
T Consensus 273 ~~~~~~~~~G~~~~~lgtD~~-~~~~~g~~~~l~~~~~~~~~-~~l~~~~al~~~T~n~A~~lgl~~ 337 (417)
T 2ogj_A 273 KVAEAAIARGLLPFSISTDLH-GHSMNFPVWDLATTMSKLLS-VDMPFENVVEAVTRNPASVIRLDM 337 (417)
T ss_dssp HHHHHHHHTTCCCSBCCBCBS-TTTTTTTCCCHHHHHHHHHH-TTCCHHHHHHTTTHHHHHHTTCCC
T ss_pred hHHHHHHHcCCCceEEEcCCC-CCccCCChhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 4889999999 9999999977 31 1111246666665554 58999998666 568888887753
No 39
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=80.41 E-value=1.8 Score=42.90 Aligned_cols=157 Identities=10% Similarity=-0.017 Sum_probs=87.2
Q ss_pred HHCCCCCCCccc-ccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchhhhhhh-chhhhhcccccccc
Q psy8141 209 RARDLNTFVLRP-HCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCG-FMMAENISHGLLLR 285 (480)
Q Consensus 209 ~~~gl~~~~l~~-HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~-~l~~~~~~~~~~l~ 285 (480)
+++|+.. .. |+.|. .+.+..++ .|.+.+.|+..... + ....+.|.+...+.. =+.++.+.|+. .
T Consensus 185 ~~~g~~v---~~gH~~~~--~~~~~~~~~~G~~~~~h~~~~~~-~-----~~~~~~g~~~~~l~~~~~~~~~~~h~~--~ 251 (382)
T 1yrr_A 185 ANAGIVV---SAGHSNAT--LKEAKAGFRAGITFATHLYNAMP-Y-----ITGREPGLAGAILDEADIYCGIIADGL--H 251 (382)
T ss_dssp HHTTCEE---EECSCCCC--HHHHHHHHHHTCCEESSTTTTSC-C-----BCSSCCHHHHHHHHCTTCEEEEECSSS--S
T ss_pred HHCCCEE---EEECCCCC--HHHHHHHHHcCCCeeEECCCCCC-c-----cccCCcchhhHhhcCCcceeeecCccc--c
Confidence 6778654 76 88874 44556666 78888999875211 0 000112222111000 01112333443 2
Q ss_pred CChHHHHHHHHcc-CeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcE-EE
Q psy8141 286 KAPVLQYLYYLAQ-IGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVV-SL 363 (480)
Q Consensus 286 ~~p~L~yl~~l~q-I~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~V-sL 363 (480)
-+|....+.+..+ ..+..||-++...+ . | ...|.-.+++.+++.|+++ +.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~d~~~~~g-~---------------------~------~~~~~~~~~~~~~~~Gv~~~~~ 303 (382)
T 1yrr_A 252 VDYANIRNAKRLKGDKLCLVTDATAPAG-A---------------------N------IEQFIFAGKTIYYRNGLCVDEN 303 (382)
T ss_dssp SCHHHHHHHHHHHGGGEEEECCBCTTTT-S---------------------C------CSEEEETTEEEEECSSCEECTT
T ss_pred cCHHHHHHHHHcCCCcEEEECcChHhcC-C---------------------C------CceEEECCEEEEEECCEEEeCC
Confidence 2566665655555 45666665433211 0 0 0113223467788999988 44
Q ss_pred cCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 364 STDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 364 sTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
+||.+. . ..+.+|...+.+..+++..+..++ ..|+.++-+.++
T Consensus 304 Gt~~g~--~---~~~~~~~~~~~~~~g~~~~~al~~aT~~~A~~lg~~~ 347 (382)
T 1yrr_A 304 GTLSGS--S---LTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEK 347 (382)
T ss_dssp CCEEEB--C---CCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTT
T ss_pred CcCcCC--c---cCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCCC
Confidence 555321 1 258899998887679999998766 568888888764
No 40
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=68.10 E-value=12 Score=37.08 Aligned_cols=158 Identities=16% Similarity=0.077 Sum_probs=89.1
Q ss_pred HHCCCCCCCccc-ccCCCCChhhHHHHh-hcccccccccccccccchhhhhhhhcccchhhhhhh-chhhhhcccccccc
Q psy8141 209 RARDLNTFVLRP-HCGEAGPIQHLVCGF-MMAENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCG-FMMAENISHGLLLR 285 (480)
Q Consensus 209 ~~~gl~~~~l~~-HaGE~~~~~~l~~a~-l~a~RIgHG~~l~~~~~~~~~~~~~~~g~~~~~~~~-~l~~~~~~~~~~l~ 285 (480)
+++|+.. .. |+.|. ++.+..++ .|++-|.|...... +. - -.+.|........ =+.|+.+.|+..
T Consensus 192 ~~~g~~v---~~gH~~~~--~~~~~~a~~~G~~~i~H~~~~~~-~~----~-~~~~G~~~~~~~~~~~~~e~~~h~~~-- 258 (396)
T 2vhl_A 192 KDESIIA---SMGHTDAD--SALLSDAAKAGASHMTHLYNAMS-PF----H-HREPGVIGTALAHDGFVTELIADGIH-- 258 (396)
T ss_dssp HHTTCEE---EECSBCCC--HHHHHHHHHTTCCEESSTTSSBC-CC----C-SSSCHHHHHHHHCTTCEEEEECSSSS--
T ss_pred HHCCCEE---eecccCCC--HHHHHHHHHcCCCEeEeCCccCc-cc----c-cCCCCchhhhhcCCCcEEEEcCCccc--
Confidence 6677643 55 88764 34455566 78888999865211 11 0 1233322211100 013334445432
Q ss_pred CChHHHHHHHHc-cC-eeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEE
Q psy8141 286 KAPVLQYLYYLA-QI-GIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSL 363 (480)
Q Consensus 286 ~~p~L~yl~~l~-qI-~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsL 363 (480)
-+|....+++.. +. .+..||-|+..-+.. ...+...|+..+.+.| ++.+
T Consensus 259 l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----------------------------~~~~~~~~~~~~~~~g-~~~~ 309 (396)
T 2vhl_A 259 SHPLAAKLAFLAKGSSKLILITDSMRAKGLK----------------------------DGVYEFGGQSVTVRGR-TALL 309 (396)
T ss_dssp SCHHHHHHHHHHHCTTSEEEECCBCTTTTSC----------------------------SEEEEETTEEEEEETT-EEEC
T ss_pred cCHHHHHHHHhhcCCccEEEECcChhhcCCC----------------------------CceEEECCeEEEEECC-EEEe
Confidence 246555444444 44 478899886432211 0113335777778889 8888
Q ss_pred cCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 364 STDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 364 sTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
||... .+.+ ..|.+|+..+.+..+++..++.++ +.|+.+.-+.++
T Consensus 310 -~d~~~-~g~~-~~l~~~l~~~~~~~~~~~~~~l~~aT~~~A~~lgl~~ 355 (396)
T 2vhl_A 310 -SDGTL-AGSI-LKMNEGARHMREFTNCSWTDIANITSENAAKQLGIFD 355 (396)
T ss_dssp -TTSCB-CSBC-CCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHHTCTT
T ss_pred -CCCcc-cccc-cCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCcC
Confidence 66433 2221 258999988887679999998776 468888777653
No 41
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=58.51 E-value=1.1e+02 Score=28.33 Aligned_cols=58 Identities=17% Similarity=0.081 Sum_probs=37.4
Q ss_pred hHHHHHCC--CcEEEcCCCccCcC-----CCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcC
Q psy8141 351 LPEYLARG--LVVSLSTDDPLQFH-----FTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSG 408 (480)
Q Consensus 351 ~~~l~~~G--l~VsLsTDDPl~f~-----~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~ 408 (480)
+.++.+.. -++.++||.|-+.. .....+.+-+..+++..+++.+++.++ ..|+.+.-+
T Consensus 199 ~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~la~~~g~~~e~~~~~~~~N~~~l~~ 264 (272)
T 2y1h_A 199 KQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLFP 264 (272)
T ss_dssp HHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHST
T ss_pred HHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 44455443 27899999995421 111224556677778889999999885 568766543
No 42
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=56.28 E-value=1.2e+02 Score=27.77 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=36.5
Q ss_pred hHHHHHCC--CcEEEcCCCccCcC-----C--CCcChHHHHHHHHHHcCCCHHHHHHHH-HHHHH
Q psy8141 351 LPEYLARG--LVVSLSTDDPLQFH-----F--TKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVL 405 (480)
Q Consensus 351 ~~~l~~~G--l~VsLsTDDPl~f~-----~--T~epL~eEY~~aa~~~~Ls~~Dl~eLa-rNSv~ 405 (480)
+.++++.. =++.++||.|-... . ....+.+.+..+++..+++.+++.++. .|+.+
T Consensus 190 ~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~la~~~g~~~e~~~~~~~~Na~r 254 (259)
T 1zzm_A 190 TRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYT 254 (259)
T ss_dssp HHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHHHHCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 45555532 37999999996421 1 112355677778888999999997775 47654
No 43
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=51.15 E-value=17 Score=36.08 Aligned_cols=61 Identities=21% Similarity=0.238 Sum_probs=36.1
Q ss_pred chHHHHHCCCcEEEcCCC-ccCc------------CCC-Cc-ChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCC
Q psy8141 350 PLPEYLARGLVVSLSTDD-PLQF------------HFT-KE-PLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFP 410 (480)
Q Consensus 350 P~~~l~~~Gl~VsLsTDD-Pl~f------------~~T-~e-pL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~ 410 (480)
.+.+.++.|+.++++||. |... +.+ .+ .+...+......-+++.+++.++ +.|+...-+.+
T Consensus 290 ~l~~~l~~G~~~~lgsD~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl~ 366 (426)
T 2z00_A 290 ALLEGLLDGTLDAIATDHAPHTLAEKEKDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGLP 366 (426)
T ss_dssp HHHHHHHHTSSCEECCCBCCCCTTGGGSCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTCC
T ss_pred HHHHHHhCCCcEEEecCCCCCCHHHccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCC
Confidence 344677799999999995 6421 111 01 11222222334457999997555 56888887764
No 44
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=43.38 E-value=54 Score=32.14 Aligned_cols=89 Identities=17% Similarity=0.099 Sum_probs=59.8
Q ss_pred ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCCchHHHHHCCCcEEEcCC
Q psy8141 287 APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTD 366 (480)
Q Consensus 287 ~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~hP~~~l~~~Gl~VsLsTD 366 (480)
.+.-..+....+..+..||.|+..... ...|+..+.+.|++|.+.||
T Consensus 301 ~~~~~~~~~~~~~~~~~~p~~~~~~~~---------------------------------~~~~~~~~~~~~~~v~~gtD 347 (479)
T 3hpa_A 301 DDAGIGLFARTGTGVAHCPCSNMRLAS---------------------------------GIAPVKKMRLAGVPVGLGVD 347 (479)
T ss_dssp CHHHHHHHHHHTCEEEECHHHHHHTTC---------------------------------CCCCHHHHHHHTCCEEECCC
T ss_pred chhHHHHHHhcCCceeecccccccccc---------------------------------CccchhHHHhcCCcEEeecc
Confidence 344444667788999999998876532 23689999999999999999
Q ss_pred CccCcCCCCcChHHHHHHHHHH-------cCCCHHHHHH-HHHHHHHHcCCC
Q psy8141 367 DPLQFHFTKEPLMEEYSIAAQV-------WKLSSCDMCE-LARNSVLMSGFP 410 (480)
Q Consensus 367 DPl~f~~T~epL~eEY~~aa~~-------~~Ls~~Dl~e-LarNSv~~S~~~ 410 (480)
.+...... ....|...+... -+++..+..+ ++.|+.+.-+.+
T Consensus 348 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl~ 397 (479)
T 3hpa_A 348 GSASNDGA--QMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRD 397 (479)
T ss_dssp CTTSSCCC--CHHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTCS
T ss_pred ccccCCCc--cHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHHhCCC
Confidence 87644332 344444332211 2588888654 456888777764
No 45
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=42.09 E-value=69 Score=31.67 Aligned_cols=34 Identities=12% Similarity=0.072 Sum_probs=27.8
Q ss_pred ChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCC
Q psy8141 377 PLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFP 410 (480)
Q Consensus 377 pL~eEY~~aa~~~~Ls~~Dl~eLa-rNSv~~S~~~ 410 (480)
.|.+|+..+.+..+++..++.+++ .|..+.-+++
T Consensus 306 ~l~~~l~~~~~~~~~~~~~~l~~~T~~~A~~lgl~ 340 (376)
T 1o12_A 306 FFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLD 340 (376)
T ss_dssp CHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCT
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCC
Confidence 599999988887799999987765 6888877765
No 46
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=39.21 E-value=28 Score=32.21 Aligned_cols=61 Identities=11% Similarity=0.152 Sum_probs=47.0
Q ss_pred CCchHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCChH
Q psy8141 348 RNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPHG 412 (480)
Q Consensus 348 ~hP~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~~ 412 (480)
..++..+.+.|.++.++||.+...+. .+..|+..+.+ .+++..+..++ +.|..+.-+++++
T Consensus 300 ~~~~~~~~~~g~~~~~gt~~~~~~~~---~~~~~~~~~~~-~gls~~eal~~~T~npA~~lgl~~~ 361 (403)
T 3mtw_A 300 RENFRKALKAGVKMVYGTDAGIYPHG---DNAKQFAVMVR-YGATPLQAIQSATLTAAEALGRSKD 361 (403)
T ss_dssp HHHHHHHHHHTCEEECCCCBTTBCTT---CGGGHHHHHHH-TTCCHHHHHHHTTHHHHHHHTCTTT
T ss_pred cchhhHHHhcCCeEeeccCCcccccc---hHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 35778899999999999999887665 36677776655 59999997655 4788888877653
No 47
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=24.19 E-value=43 Score=36.10 Aligned_cols=61 Identities=16% Similarity=0.175 Sum_probs=38.4
Q ss_pred chHHHHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHH---cC-C----------CHHH-HHHHHHHHHHHcCCCh
Q psy8141 350 PLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV---WK-L----------SSCD-MCELARNSVLMSGFPH 411 (480)
Q Consensus 350 P~~~l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~---~~-L----------s~~D-l~eLarNSv~~S~~~~ 411 (480)
|+..|++.|+.++++||.|.+-... +.+..-+..+.+. .+ + +..+ |.....|+....+.++
T Consensus 347 a~~~L~d~G~~v~~gSD~p~~~~~g-e~~~~~~~~a~~~~~~rg~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~ 422 (570)
T 4ac7_C 347 AEDILHDLGIISMMSTDALAMGRAG-EMVLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAH 422 (570)
T ss_dssp HHHHHHHTTSSCBCCCCBTTSSCTT-CHHHHHHHHHHHHHHHHCSCTTCCTTCCHHHHHHHHHHHTHHHHHHHTCTT
T ss_pred cccchhhcCCEEEEECcccccCCcC-cccCcHHHHHHHHHHhcCCCCCccccccCCCHHHHHHHHhHHHHHHhCCCC
Confidence 7889999999999999999865432 2334444443221 11 2 2222 5556668888777665
No 48
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=23.69 E-value=74 Score=29.28 Aligned_cols=94 Identities=11% Similarity=-0.047 Sum_probs=55.2
Q ss_pred hhhhccccccccC----ChHHHHHHHHccCeeeEccCCchhhccccCCCCchHHhhhhhhhhcccCCCCCCcccccccCC
Q psy8141 274 MAENISHGLLLRK----APVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRN 349 (480)
Q Consensus 274 ~~~~~~~~~~l~~----~p~L~yl~~l~qI~ievcPlSN~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sy~~h 349 (480)
..|.|+||+.... +..+......+++.||++-.|=...... .+. -...
T Consensus 96 ~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~~~~----------~R~------------------~~~~ 147 (212)
T 1v77_A 96 GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNPY----------ERA------------------NLLR 147 (212)
T ss_dssp TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCHH----------HHH------------------HHHH
T ss_pred CCCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcCCcc----------hHH------------------HHHH
Confidence 4678888875522 3466667788999999975431110000 000 0012
Q ss_pred chHH----HHHCCCcEEEcCCCccCcCCCCcChHHHHHHHHHHcCCCHHHHHH
Q psy8141 350 PLPE----YLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCE 398 (480)
Q Consensus 350 P~~~----l~~~Gl~VsLsTDDPl~f~~T~epL~eEY~~aa~~~~Ls~~Dl~e 398 (480)
|++. -.+.|.+|++|||----++-. =-++-...++.+|++.+.+.+
T Consensus 148 ~~~~il~l~k~~g~~ivisSDAh~~~~v~---~~~~~~~l~~~~G~~~e~~~~ 197 (212)
T 1v77_A 148 FMMKAWKLVEKYKVRRFLTSSAQEKWDVR---YPRDLISLGVVIGMEIPQAKA 197 (212)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSSGGGCC---CHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCChhhcC---CHHHHHHHHHHcCCCHHHHHH
Confidence 2232 335699999999987655541 224555666778999876544
No 49
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=23.12 E-value=4.2e+02 Score=23.92 Aligned_cols=61 Identities=10% Similarity=0.034 Sum_probs=39.9
Q ss_pred hHHHHHC-C-CcEEEcCCCccCcCC-----CCc--ChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy8141 351 LPEYLAR-G-LVVSLSTDDPLQFHF-----TKE--PLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 411 (480)
Q Consensus 351 ~~~l~~~-G-l~VsLsTDDPl~f~~-----T~e--pL~eEY~~aa~~~~Ls~~Dl~eL-arNSv~~S~~~~ 411 (480)
+..+++. | =++.++||.|-.... ..+ .+.+.+..+++..+++.+++.++ ..|+.+.-+++.
T Consensus 188 ~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~~~~~~~i~~~Na~rl~~l~~ 258 (265)
T 1yix_A 188 LRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDA 258 (265)
T ss_dssp HHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCcCh
Confidence 4556664 4 389999999964211 011 25566677777789999999885 458777655544
Done!