RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8141
(480 letters)
>d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 628
Score = 454 bits (1168), Expect = e-155
Identities = 199/401 (49%), Positives = 244/401 (60%), Gaps = 69/401 (17%)
Query: 58 EVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKS 117
+V +DLE SKYQ AE R+SIYG+ EWD+LA+W + +++YS N+ WLIQ+PRLY+I+K
Sbjct: 286 QVFSDLEASKYQMAEYRISIYGRKMSEWDQLASWIVNNDLYSENVVWLIQLPRLYNIYKD 345
Query: 118 NKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVL 177
++ +FQ IL NIF PLFE T D SHP LH FL+ V+GFD VDDESKPE +
Sbjct: 346 MGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLVDDESKPERR-PTKHMP 404
Query: 178 TPPQWNLEENPCYAYYQYYTYANLTVLNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMM 237
TP QW NP ++YY YY YANL VLN R ++ + T LRPH GEAG
Sbjct: 405 TPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLRPHSGEAGD---------- 454
Query: 238 AENISHGLLLRKAPVLQYLYYLAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLA 297
I HL F+ +I+HG+ LRK+PVLQYLYYLA
Sbjct: 455 ---------------------------IDHLAATFLTCHSIAHGINLRKSPVLQYLYYLA 487
Query: 298 QIGIAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLAR 357
QIG+AMSPLS NNSLFL+YHRNP P + R
Sbjct: 488 QIGLAMSPLS-------------------------------NNSLFLDYHRNPFPVFFLR 516
Query: 358 GLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYW 417
GL VSLSTDDPLQ H TKEPL+EEYSIAA VWKLS+CD+CE+ARNSV SGF H +K +W
Sbjct: 517 GLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALKSHW 576
Query: 418 LGPNYTKEGVAGNDITRTNVPDIRVAFRSETMIEELSNIFR 458
+G +Y K G GNDI +TNVP IRV FR EE+ ++
Sbjct: 577 IGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYL 617
>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium
yoelii [TaxId: 5861]}
Length = 357
Score = 79.1 bits (194), Expect = 1e-16
Identities = 16/120 (13%), Positives = 41/120 (34%), Gaps = 5/120 (4%)
Query: 301 IAMSPLSNNSLFLNYHRNPLPEYLARGLVVRIAMSPLSN--NSLFLNYHRNPLPEYLARG 358
I + + + + L + + + + P+SN + + +P+ + G
Sbjct: 237 INILNVERIGHGIRVSESDELIELVKKKDILLEVCPISNLLLNNVKSMDTHPIRKLYDAG 296
Query: 359 LVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWL 418
+ VS+++DDP F + + Y + + + + S +K
Sbjct: 297 VKVSVNSDDPGMFLSN---INDNYEKLYIHLNFTLEEFMIMNNWAFEKSFVSDDVKSELK 353
>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 349
Score = 78.0 bits (191), Expect = 3e-16
Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 5/113 (4%)
Query: 308 NNSLFLNYHRNPLPEYLARGLVVRIAMSPLSN--NSLFLNYHRNPLPEYLARGLVVSLST 365
+ + + + P S+ + + + + SL+T
Sbjct: 232 RVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNT 291
Query: 366 DDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGMKQYWL 418
DDPL F T L +Y + + + + L N+ S P K+ L
Sbjct: 292 DDPLIFKST---LDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLPEEEKKELL 341
>d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824
{Deinococcus radiodurans [TaxId: 1299]}
Length = 308
Score = 28.9 bits (63), Expect = 1.3
Identities = 29/170 (17%), Positives = 52/170 (30%), Gaps = 10/170 (5%)
Query: 204 LNHFRRARDLNTFVLRPHCGEAGPIQHLVCGFMMAENISHGLLLRKAPVLQYLY-----Y 258
H R R L LR P + + + G L + +
Sbjct: 100 RTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMF 159
Query: 259 LAQIGTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRN 318
G + + ++ + P L + YL ++G + L + N
Sbjct: 160 RTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELG-----VLAARPTLVHMVN 214
Query: 319 PLPEYLARGLVVRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDP 368
P+ +AR A+ ++ L P + A G+ V+L TD
Sbjct: 215 VTPDDIARVARAGCAVVTCPRSNHHLECGTFDWPAFAAAGVEVALGTDSV 264
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 27.2 bits (60), Expect = 4.0
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Query: 105 LIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSS---SHPHLHKFLQYV 155
+ +PRL + F E ++NI + VT + L+
Sbjct: 82 MGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELT 135
>d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium
tumefaciens [TaxId: 358]}
Length = 301
Score = 27.2 bits (58), Expect = 4.6
Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 2/139 (1%)
Query: 263 GTIQHLVCGFMMAENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLNYHRNPLPE 322
G + + + + R PV + L+ +G A S N+L ++
Sbjct: 148 GFCEGIAFSVKEIDRVFAAAQQRGLPVKLHAEQLSNLGGAELAASYNALSADHLEYLDET 207
Query: 323 YLARGLVVRIAMSPLSNNSLFLNY-HRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEE 381
L L P+ G ++L+TD L+
Sbjct: 208 GAKALAKAGTVAVLLPGAFYALREKQLPPVQALRDAGAEIALATDCNPGTSPLTS-LLLT 266
Query: 382 YSIAAQVWKLSSCDMCELA 400
++ A +++++ +
Sbjct: 267 MNMGATLFRMTVEECLTAT 285
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer
{Caenorhabditis elegans [TaxId: 6239]}
Length = 250
Score = 26.4 bits (57), Expect = 6.9
Identities = 6/32 (18%), Positives = 9/32 (28%)
Query: 321 PEYLARGLVVRIAMSPLSNNSLFLNYHRNPLP 352
E L+ S+N F + P
Sbjct: 218 VEQSTAELISSFNKLDNSHNGRFFMRNLKPYE 249
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.414
Gapped
Lambda K H
0.267 0.0343 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,817,077
Number of extensions: 85101
Number of successful extensions: 197
Number of sequences better than 10.0: 1
Number of HSP's gapped: 193
Number of HSP's successfully gapped: 11
Length of query: 480
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 391
Effective length of database: 1,185,626
Effective search space: 463579766
Effective search space used: 463579766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (26.1 bits)