RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8147
         (197 letters)



>d2fyma1 c.1.11.1 (A:140-431) Enolase {Escherichia coli [TaxId:
           562]}
          Length = 292

 Score = 25.7 bits (56), Expect = 3.8
 Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 7/30 (23%)

Query: 127 YSIPCPM-----GDKRRHVGRKPQFQVFML 151
           YS+P PM     G +  H       Q FM+
Sbjct: 4   YSMPVPMMNIINGGE--HADNNVDIQEFMI 31


>g1as4.1 e.1.1.1 (A:,B:) Antichymotrypsin, alpha-1 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 369

 Score = 25.2 bits (54), Expect = 6.0
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 22 FVIIPLSIYLILGLVFLFTGFISLLRIRTIMKHDGTKTDKLE 63
           +  PLSI   L  + L     +L  I   +K + T+T + E
Sbjct: 26 VIFSPLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAE 67


>d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 295

 Score = 25.0 bits (54), Expect = 7.6
 Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 7/30 (23%)

Query: 127 YSIPCPM-----GDKRRHVGRKPQFQVFML 151
           Y +P P      G    H G     Q FM+
Sbjct: 3   YVLPVPFLNVLNGGS--HAGGALALQEFMI 30


>d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 383

 Score = 24.8 bits (53), Expect = 7.7
 Identities = 7/45 (15%), Positives = 16/45 (35%)

Query: 22 FVIIPLSIYLILGLVFLFTGFISLLRIRTIMKHDGTKTDKLEKLM 66
           ++ PLS+   L  + L     +   I   + +D   +  +    
Sbjct: 43 VLLSPLSVATALSALSLGADERTESIIHRALYYDLISSPDIHGTY 87


>g1lq8.1 e.1.1.1 (A:,B:) Protein C inhibitor {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 358

 Score = 24.8 bits (53), Expect = 9.1
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 22 FVIIPLSIYLILGLVFLFTGFISLLRIRTIMKHDGTKTDKLE 63
              P+SI + L ++ L  G  + ++I   +  +  K+ + E
Sbjct: 21 IFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKE 62


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.329    0.141    0.460 

Gapped
Lambda     K      H
   0.267   0.0477    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 786,715
Number of extensions: 35191
Number of successful extensions: 107
Number of sequences better than 10.0: 1
Number of HSP's gapped: 107
Number of HSP's successfully gapped: 16
Length of query: 197
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 116
Effective length of database: 1,295,466
Effective search space: 150274056
Effective search space used: 150274056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 50 (23.6 bits)