BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8148
(390 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q61321|SIX4_MOUSE Homeobox protein SIX4 OS=Mus musculus GN=Six4 PE=2 SV=1
Length = 775
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 148/180 (82%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
P ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP + +RG ES+L+ARA+VA+ + +
Sbjct: 97 PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156
Query: 205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
ELY+ILESH+F+S H LQQLW + Y E + RGR LGAVDKYR+R+KFPLP+TIWDG
Sbjct: 157 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDG 216
Query: 265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
EETVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct: 217 EETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 276
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 74/100 (74%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
P ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP + +RG ES+L+ARA+VA+ + +
Sbjct: 97 PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156
Query: 66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
ELY+ILESH+F+S H LQQLW + Y E + RGR LG
Sbjct: 157 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 196
>sp|Q9UIU6|SIX4_HUMAN Homeobox protein SIX4 OS=Homo sapiens GN=SIX4 PE=1 SV=2
Length = 781
Score = 268 bits (686), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 147/178 (82%)
Query: 147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
++F+P+ + C+CEA+QQ G+ D+LA FLWSLP + +RG ES+L+ARA+VA+ + + EL
Sbjct: 106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 165
Query: 207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
Y+ILESH+F+S H LQQLW + Y E + RGR LGAVDKYR+R+KFPLP+TIWDGEE
Sbjct: 166 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 225
Query: 267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
TVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct: 226 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 283
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 73/98 (74%)
Query: 8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
++F+P+ + C+CEA+QQ G+ D+LA FLWSLP + +RG ES+L+ARA+VA+ + + EL
Sbjct: 106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 165
Query: 68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
Y+ILESH+F+S H LQQLW + Y E + RGR LG
Sbjct: 166 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 203
>sp|P70178|SIX5_MOUSE Homeobox protein SIX5 OS=Mus musculus GN=Six5 PE=1 SV=2
Length = 719
Score = 260 bits (664), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 140/176 (79%)
Query: 146 NMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHE 205
+ F+PEQ+ C+CEA+ Q+G +L+ FL +LPP E +RG + VLRARA+VA++R + E
Sbjct: 76 GLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAE 135
Query: 206 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGE 265
LY +LES F + +HA LQ L++R Y E + RGR LGAVDKYR+RKKFPLPKTIWDGE
Sbjct: 136 LYQLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGE 195
Query: 266 ETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
ETVYCFKERSR ALK CY NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct: 196 ETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 251
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 69/99 (69%)
Query: 7 NMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHE 66
+ F+PEQ+ C+CEA+ Q+G +L+ FL +LPP E +RG + VLRARA+VA++R + E
Sbjct: 76 GLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAE 135
Query: 67 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
LY +LES F + +HA LQ L++R Y E + RGR LG
Sbjct: 136 LYQLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG 174
>sp|Q8N196|SIX5_HUMAN Homeobox protein SIX5 OS=Homo sapiens GN=SIX5 PE=1 SV=3
Length = 739
Score = 260 bits (664), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 140/176 (79%)
Query: 146 NMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHE 205
+ F+PEQ+ C+CEA+ Q+G +L+ FL +LPP E +RG + VLRARA+VA++R + E
Sbjct: 83 GLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAE 142
Query: 206 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGE 265
LY +LES F + +HA LQ L++R Y E + RGR LGAVDKYR+RKKFPLPKTIWDGE
Sbjct: 143 LYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGE 202
Query: 266 ETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
ETVYCFKERSR ALK CY NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct: 203 ETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 258
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 69/99 (69%)
Query: 7 NMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHE 66
+ F+PEQ+ C+CEA+ Q+G +L+ FL +LPP E +RG + VLRARA+VA++R + E
Sbjct: 83 GLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAE 142
Query: 67 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
LY +LES F + +HA LQ L++R Y E + RGR LG
Sbjct: 143 LYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG 181
>sp|Q62232|SIX2_MOUSE Homeobox protein SIX2 OS=Mus musculus GN=Six2 PE=1 SV=2
Length = 296
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 137/181 (75%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
P FT EQ+ C+CE +QQ G+ ++L FLWSLP E + ESVL+A+AVVA+ R F
Sbjct: 5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64
Query: 205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
ELY ILESH F HA+LQQLW++ HY E K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct: 65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124
Query: 265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
EET YCFKE+SR+ L+E Y N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR +
Sbjct: 125 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184
Query: 325 R 325
+
Sbjct: 185 K 185
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 69/100 (69%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
P FT EQ+ C+CE +QQ G+ ++L FLWSLP E + ESVL+A+AVVA+ R F
Sbjct: 5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64
Query: 66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
ELY ILESH F HA+LQQLW++ HY E K+RGR LG
Sbjct: 65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 104
>sp|Q9NPC8|SIX2_HUMAN Homeobox protein SIX2 OS=Homo sapiens GN=SIX2 PE=2 SV=1
Length = 291
Score = 244 bits (624), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 137/181 (75%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
P FT EQ+ C+CE +QQ G+ ++L FLWSLP E + ESVL+A+AVVA+ R F
Sbjct: 5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64
Query: 205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
ELY ILESH F HA+LQQLW++ HY E K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct: 65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124
Query: 265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
EET YCFKE+SR+ L+E Y N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR +
Sbjct: 125 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184
Query: 325 R 325
+
Sbjct: 185 K 185
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 69/100 (69%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
P FT EQ+ C+CE +QQ G+ ++L FLWSLP E + ESVL+A+AVVA+ R F
Sbjct: 5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64
Query: 66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
ELY ILESH F HA+LQQLW++ HY E K+RGR LG
Sbjct: 65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 104
>sp|Q62231|SIX1_MOUSE Homeobox protein SIX1 OS=Mus musculus GN=Six1 PE=1 SV=2
Length = 284
Score = 244 bits (623), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 136/181 (75%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
P+ FT EQ+ C+CE +QQ G+ ++L FLWSLP + + ESVL+A+AVVA+ R F
Sbjct: 5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64
Query: 205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
ELY ILESH F H +LQQLW++ HY E K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124
Query: 265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
EET YCFKE+SR L+E Y N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR +
Sbjct: 125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184
Query: 325 R 325
+
Sbjct: 185 K 185
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 69/100 (69%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
P+ FT EQ+ C+CE +QQ G+ ++L FLWSLP + + ESVL+A+AVVA+ R F
Sbjct: 5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64
Query: 66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
ELY ILESH F H +LQQLW++ HY E K+RGR LG
Sbjct: 65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104
>sp|A2D5H2|SIX1_LAGLA Homeobox protein SIX1 OS=Lagothrix lagotricha GN=SIX1 PE=3 SV=1
Length = 284
Score = 244 bits (623), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 136/181 (75%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
P+ FT EQ+ C+CE +QQ G+ ++L FLWSLP + + ESVL+A+AVVA+ R F
Sbjct: 5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64
Query: 205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
ELY ILESH F H +LQQLW++ HY E K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124
Query: 265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
EET YCFKE+SR L+E Y N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR +
Sbjct: 125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184
Query: 325 R 325
+
Sbjct: 185 K 185
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 69/100 (69%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
P+ FT EQ+ C+CE +QQ G+ ++L FLWSLP + + ESVL+A+AVVA+ R F
Sbjct: 5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64
Query: 66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
ELY ILESH F H +LQQLW++ HY E K+RGR LG
Sbjct: 65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104
>sp|Q15475|SIX1_HUMAN Homeobox protein SIX1 OS=Homo sapiens GN=SIX1 PE=1 SV=1
Length = 284
Score = 244 bits (623), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 136/181 (75%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
P+ FT EQ+ C+CE +QQ G+ ++L FLWSLP + + ESVL+A+AVVA+ R F
Sbjct: 5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64
Query: 205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
ELY ILESH F H +LQQLW++ HY E K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124
Query: 265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
EET YCFKE+SR L+E Y N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR +
Sbjct: 125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184
Query: 325 R 325
+
Sbjct: 185 K 185
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 69/100 (69%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
P+ FT EQ+ C+CE +QQ G+ ++L FLWSLP + + ESVL+A+AVVA+ R F
Sbjct: 5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64
Query: 66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
ELY ILESH F H +LQQLW++ HY E K+RGR LG
Sbjct: 65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104
>sp|A1YER0|SIX1_GORGO Homeobox protein SIX1 OS=Gorilla gorilla gorilla GN=SIX1 PE=3 SV=1
Length = 284
Score = 244 bits (623), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 136/181 (75%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
P+ FT EQ+ C+CE +QQ G+ ++L FLWSLP + + ESVL+A+AVVA+ R F
Sbjct: 5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64
Query: 205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
ELY ILESH F H +LQQLW++ HY E K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124
Query: 265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
EET YCFKE+SR L+E Y N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR +
Sbjct: 125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184
Query: 325 R 325
+
Sbjct: 185 K 185
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 69/100 (69%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
P+ FT EQ+ C+CE +QQ G+ ++L FLWSLP + + ESVL+A+AVVA+ R F
Sbjct: 5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64
Query: 66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
ELY ILESH F H +LQQLW++ HY E K+RGR LG
Sbjct: 65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104
>sp|Q27350|SO_DROME Protein sine oculis OS=Drosophila melanogaster GN=so PE=2 SV=1
Length = 416
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 143/195 (73%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
P+ FT EQ+ C+CE +QQ+G+ ++L FLWSLP + ++ ESVL+A+AVVA+ R +
Sbjct: 99 PSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQYK 158
Query: 205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
ELY +LE H+F ++ HA+LQ LW++ HY E K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct: 159 ELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 218
Query: 265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
EET YCFKE+SR+ L++ Y N YP+P EKR L+E TGLT TQVSNWFKNRRQRDR +
Sbjct: 219 EETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEH 278
Query: 325 RSIQRSRNALKECYD 339
+ + L D
Sbjct: 279 KDGSTDKQHLDSSSD 293
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 73/100 (73%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
P+ FT EQ+ C+CE +QQ+G+ ++L FLWSLP + ++ ESVL+A+AVVA+ R +
Sbjct: 99 PSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQYK 158
Query: 66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
ELY +LE H+F ++ HA+LQ LW++ HY E K+RGR LG
Sbjct: 159 ELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLG 198
>sp|O42406|SIX3_CHICK Homeobox protein SIX3 OS=Gallus gallus GN=SIX3 PE=2 SV=2
Length = 314
Score = 218 bits (555), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 137/185 (74%), Gaps = 5/185 (2%)
Query: 135 QEYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVL 190
E L+M +L P ++F+PEQ+ +CE ++++GD ++L FLWSLP EAI ES+L
Sbjct: 56 HEELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESIL 114
Query: 191 RARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYR 250
RARAVVA+ F +LY ILE+H F + H +LQ +W+ HY+E K+RGR LG VDKYR
Sbjct: 115 RARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYR 174
Query: 251 IRKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSN 310
+RKKFPLP+TIWDGE+ +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV N
Sbjct: 175 VRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGN 234
Query: 311 WFKNR 315
WFKNR
Sbjct: 235 WFKNR 239
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 61
P ++F+PEQ+ +CE ++++GD ++L FLWSLP EAI ES+LRARAVVA+
Sbjct: 65 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 124
Query: 62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
F +LY ILE+H F + H +LQ +W+ HY+E K+RGR LG
Sbjct: 125 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 168
>sp|O95343|SIX3_HUMAN Homeobox protein SIX3 OS=Homo sapiens GN=SIX3 PE=1 SV=1
Length = 332
Score = 218 bits (554), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 137/184 (74%), Gaps = 5/184 (2%)
Query: 136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLR 191
E L+M +L P ++F+PEQ+ +CE ++++GD ++L FLWSLP EAI ES+LR
Sbjct: 75 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 133
Query: 192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
ARAVVA+ F +LY ILE+H F + H +LQ +W+ HY+E K+RGR LG VDKYR+
Sbjct: 134 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 193
Query: 252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
RKKFPLP+TIWDGE+ +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct: 194 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 253
Query: 312 FKNR 315
FKNR
Sbjct: 254 FKNR 257
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 61
P ++F+PEQ+ +CE ++++GD ++L FLWSLP EAI ES+LRARAVVA+
Sbjct: 83 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 142
Query: 62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
F +LY ILE+H F + H +LQ +W+ HY+E K+RGR LG
Sbjct: 143 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 186
>sp|Q62233|SIX3_MOUSE Homeobox protein SIX3 OS=Mus musculus GN=Six3 PE=1 SV=2
Length = 333
Score = 217 bits (553), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 137/184 (74%), Gaps = 5/184 (2%)
Query: 136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLR 191
E L+M +L P ++F+PEQ+ +CE ++++GD ++L FLWSLP EAI ES+LR
Sbjct: 76 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 134
Query: 192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
ARAVVA+ F +LY ILE+H F + H +LQ +W+ HY+E K+RGR LG VDKYR+
Sbjct: 135 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 194
Query: 252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
RKKFPLP+TIWDGE+ +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct: 195 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 254
Query: 312 FKNR 315
FKNR
Sbjct: 255 FKNR 258
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 61
P ++F+PEQ+ +CE ++++GD ++L FLWSLP EAI ES+LRARAVVA+
Sbjct: 84 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 143
Query: 62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
F +LY ILE+H F + H +LQ +W+ HY+E K+RGR LG
Sbjct: 144 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 187
>sp|O95475|SIX6_HUMAN Homeobox protein SIX6 OS=Homo sapiens GN=SIX6 PE=1 SV=2
Length = 246
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 142/202 (70%), Gaps = 11/202 (5%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 200
P ++F+P+Q+ +CE +++SGD ++L FLWSLP EA+ ESVLRARA+VA+
Sbjct: 5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64
Query: 201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
+ ELY ILE+H F + HA+LQ LW+ HY+E K+RGR LG VDKYR+RKKFPLP+T
Sbjct: 65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 124
Query: 261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNR----- 315
IWDGE+ +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNR
Sbjct: 125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 184
Query: 316 --RQRDRTPQQRSIQRSRNALK 335
++R QQ Q S AL+
Sbjct: 185 AAAAKNRLQQQVLSQGSGRALR 206
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 61
P ++F+P+Q+ +CE +++SGD ++L FLWSLP EA+ ESVLRARA+VA+
Sbjct: 5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64
Query: 62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
+ ELY ILE+H F + HA+LQ LW+ HY+E K+RGR LG
Sbjct: 65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLG 108
>sp|O93307|SIX6_CHICK Homeobox protein SIX6 OS=Gallus gallus GN=SIX6 PE=2 SV=1
Length = 246
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 131/175 (74%), Gaps = 4/175 (2%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 200
P ++F+P+Q+ +CE +++SGD ++L FLWSLP EA+ ESVLRARA+VA+
Sbjct: 5 PILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHT 64
Query: 201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
+ ELY ILE+H F + H +LQ LW+ HY+E K+RGR LG VDKYR+RKKFPLP+T
Sbjct: 65 GNYRELYHILENHKFTKESHGKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 124
Query: 261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNR 315
IWDGE+ +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNR
Sbjct: 125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNR 179
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 61
P ++F+P+Q+ +CE +++SGD ++L FLWSLP EA+ ESVLRARA+VA+
Sbjct: 5 PILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHT 64
Query: 62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
+ ELY ILE+H F + H +LQ LW+ HY+E K+RGR LG
Sbjct: 65 GNYRELYHILENHKFTKESHGKLQALWLEAHYQEAEKLRGRPLG 108
>sp|Q9QZ28|SIX6_MOUSE Homeobox protein SIX6 OS=Mus musculus GN=Six6 PE=2 SV=2
Length = 246
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 4/175 (2%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 200
P ++F+P+Q+ +CE +++SGD ++L FLWSLP EA+ ESVLRARA+VA+
Sbjct: 5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64
Query: 201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
+ ELY ILE+H F + HA+LQ LW+ HY+E K+RGR LG VDKYR+RKKFPLP+T
Sbjct: 65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 124
Query: 261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNR 315
IWDGE+ +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNR
Sbjct: 125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNR 179
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ----EAIRGQESVLRARAVVAYKR 61
P ++F+P+Q+ +CE +++SGD ++L FLWSLP EA+ ESVLRARA+VA+
Sbjct: 5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64
Query: 62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
+ ELY ILE+H F + HA+LQ LW+ HY+E K+RGR LG
Sbjct: 65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLG 108
>sp|O73916|SIX3_ORYLA Homeobox protein SIX3 OS=Oryzias latipes GN=six3 PE=2 SV=1
Length = 272
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 127/175 (72%), Gaps = 4/175 (2%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP----PQEAIRGQESVLRARAVVAYKR 200
P + F+ QI +CE ++++GD ++LA FLWSLP +++I ESV RARAVVA+
Sbjct: 46 PGLCFSATQIASVCETLEETGDIERLARFLWSLPVNTDGRDSISEHESVQRARAVVAFHT 105
Query: 201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
+ ELY ILE+H F H++LQ +W+ HY+E K+RGR LG VDKYR+RKKFPLP+T
Sbjct: 106 GCYRELYRILETHRFTRASHSKLQAMWLEAHYREAEKLRGRPLGPVDKYRVRKKFPLPRT 165
Query: 261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNR 315
IWDGE+ +CFKER+R L+E Y ++ YPNP +KR+L+ TGLT TQV NWFKNR
Sbjct: 166 IWDGEQKTHCFKERTRGLLREWYLQDPYPNPGKKRELAHATGLTPTQVGNWFKNR 220
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP----PQEAIRGQESVLRARAVVAYKR 61
P + F+ QI +CE ++++GD ++LA FLWSLP +++I ESV RARAVVA+
Sbjct: 46 PGLCFSATQIASVCETLEETGDIERLARFLWSLPVNTDGRDSISEHESVQRARAVVAFHT 105
Query: 62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
+ ELY ILE+H F H++LQ +W+ HY+E K+RGR LG
Sbjct: 106 GCYRELYRILETHRFTRASHSKLQAMWLEAHYREAEKLRGRPLG 149
>sp|Q94166|HM33_CAEEL Homeobox protein ceh-33 OS=Caenorhabditis elegans GN=ceh-33 PE=3
SV=1
Length = 261
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 132/173 (76%), Gaps = 2/173 (1%)
Query: 149 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHELYA 208
++ EQ+ C+CEA+ S D KL+ F+W++ ++ +R + +L+A+A +A+ + F ELY
Sbjct: 20 YSEEQVACICEAL--SNDARKLSQFVWTVLERDEMRNNQYILKAQAFLAFHSNNFKELYR 77
Query: 209 ILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEETV 268
I+ESH+F S++H LQ+ W+ HY E KIRGR LGAV KYRIR+K+PLP+TIWDGEET
Sbjct: 78 IIESHHFASEHHLPLQEWWLNAHYHEAEKIRGRQLGAVGKYRIRRKYPLPRTIWDGEETS 137
Query: 269 YCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
YCF+++SR L++ Y +N YP+P EKR+L+E T LT+TQVSNWFKNRRQRDR
Sbjct: 138 YCFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRA 190
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Query: 10 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHELYA 69
++ EQ+ C+CEA+ S D KL+ F+W++ ++ +R + +L+A+A +A+ + F ELY
Sbjct: 20 YSEEQVACICEAL--SNDARKLSQFVWTVLERDEMRNNQYILKAQAFLAFHSNNFKELYR 77
Query: 70 ILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
I+ESH+F S++H LQ+ W+ HY E KIRGR LG
Sbjct: 78 IIESHHFASEHHLPLQEWWLNAHYHEAEKIRGRQLG 113
>sp|Q95RW8|OPTIX_DROME Protein Optix OS=Drosophila melanogaster GN=Optix PE=2 SV=1
Length = 487
Score = 204 bits (520), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPP----QEAIRGQESVLRARAVVAYKR 200
P ++F+ Q++ +C+ ++ SGD ++LA FLWSLP I E+VLRARAVVAY
Sbjct: 33 PTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARAVVAYHV 92
Query: 201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
F ELYAI+E+H F + +LQ +W+ HY E K+RGR LG VDKYR+RKKFPLP T
Sbjct: 93 GNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKKFPLPPT 152
Query: 261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
IWDGE+ +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGL TQV NWFKNRRQRDR
Sbjct: 153 IWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKNRRQRDR 212
Query: 321 TPQQRS-IQRSRNA 333
++ IQ S+N+
Sbjct: 213 AAAAKNRIQHSQNS 226
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPP----QEAIRGQESVLRARAVVAYKR 61
P ++F+ Q++ +C+ ++ SGD ++LA FLWSLP I E+VLRARAVVAY
Sbjct: 33 PTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARAVVAYHV 92
Query: 62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
F ELYAI+E+H F + +LQ +W+ HY E K+RGR LG
Sbjct: 93 GNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLG 136
>sp|Q23175|HM32_CAEEL Homeobox protein ceh-32 OS=Caenorhabditis elegans GN=ceh-32 PE=1
SV=2
Length = 439
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 121/170 (71%), Gaps = 2/170 (1%)
Query: 148 SFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEA--IRGQESVLRARAVVAYKRHAFHE 205
+ T +QI CE ++ GD D L F+ ++PPQ+ + G E+ LRARA+V + F E
Sbjct: 67 NLTADQIVKTCEQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHASHFRE 126
Query: 206 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGE 265
LYAILE++ F KYH +LQ++W HY+E K RG+ L AVDKYR+RKK+P+P+TIWDGE
Sbjct: 127 LYAILENNKFSPKYHPKLQEMWHEAHYREQEKNRGKSLCAVDKYRVRKKYPMPRTIWDGE 186
Query: 266 ETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNR 315
+ +CFKER+R+ L+E Y K+ YPNP +K++L+ TGLT QV NWFKNR
Sbjct: 187 QKTHCFKERTRSLLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKNR 236
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 9 SFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEA--IRGQESVLRARAVVAYKRHAFHE 66
+ T +QI CE ++ GD D L F+ ++PPQ+ + G E+ LRARA+V + F E
Sbjct: 67 NLTADQIVKTCEQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHASHFRE 126
Query: 67 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDL 104
LYAILE++ F KYH +LQ++W HY+E K RG+ L
Sbjct: 127 LYAILENNKFSPKYHPKLQEMWHEAHYREQEKNRGKSL 164
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 11/66 (16%)
Query: 316 RQRDRTPQQRSI-----------QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVS 364
R R + P R+I +R+R+ L+E Y K+ YPNP +K++L+ TGLT QV
Sbjct: 171 RVRKKYPMPRTIWDGEQKTHCFKERTRSLLREWYLKDPYPNPPKKKELANATGLTQMQVG 230
Query: 365 NWFKNR 370
NWFKNR
Sbjct: 231 NWFKNR 236
>sp|Q94165|HM34_CAEEL Homeobox protein ceh-34 OS=Caenorhabditis elegans GN=ceh-34 PE=3
SV=2
Length = 256
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 134/205 (65%), Gaps = 8/205 (3%)
Query: 135 QEYLNMKKLNPNMSFTPEQIDCLCEAM----QQSGDFDKLAMFLWSLPPQEAIRGQESVL 190
Q Y L S++ ++I C+CE++ Q+G ++LA F+++LP + + ESVL
Sbjct: 3 QSYNPQNSLTATTSYSEQEIVCICESLFNEGLQTGRTEQLANFIYNLP--QCYQVMESVL 60
Query: 191 RARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYR 250
+A+A+V + + LY +LE F H LQ LW+ HYKE AK + R+LGAV KYR
Sbjct: 61 KAQALVYFTTQNWKMLYKLLECSKFSPHNHTVLQNLWLDAHYKEAAKTKDRELGAVCKYR 120
Query: 251 IRKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSN 310
IRKK P P TIWDGEET YCFK +SRN L++ Y K +YP+ ++KR+L++ T L++ QVSN
Sbjct: 121 IRKKNPFPNTIWDGEETNYCFKSKSRNVLRDAYKKCQYPSVEDKRRLAQQTELSIIQVSN 180
Query: 311 WFKNRRQRDRTPQQ--RSIQRSRNA 333
WFKN+RQR+R Q RS RS ++
Sbjct: 181 WFKNKRQRERAAGQLDRSSARSNDS 205
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Query: 4 LNPNMSFTPEQIDCLCEAM----QQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAY 59
L S++ ++I C+CE++ Q+G ++LA F+++LP + + ESVL+A+A+V +
Sbjct: 11 LTATTSYSEQEIVCICESLFNEGLQTGRTEQLANFIYNLP--QCYQVMESVLKAQALVYF 68
Query: 60 KRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
+ LY +LE F H LQ LW+ HYKE AK + R+LG
Sbjct: 69 TTQNWKMLYKLLECSKFSPHNHTVLQNLWLDAHYKEAAKTKDRELG 114
>sp|P0CJ90|DU4L7_HUMAN Double homeobox protein 4-like protein 7 OS=Homo sapiens GN=DUX4L7
PE=2 SV=1
Length = 424
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 278 ALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--------------RTPQ 323
AL+ C+++N YP + +L++ G+ +V WF+N R R R P
Sbjct: 33 ALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPP 92
Query: 324 Q-----RSIQRSRNA-LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
+ ++ S+ A L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>sp|P0CJ89|DU4L6_HUMAN Double homeobox protein 4-like protein 6 OS=Homo sapiens GN=DUX4L6
PE=2 SV=1
Length = 424
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 278 ALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--------------RTPQ 323
AL+ C+++N YP + +L++ G+ +V WF+N R R R P
Sbjct: 33 ALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPP 92
Query: 324 Q-----RSIQRSRNA-LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
+ ++ S+ A L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>sp|P0CJ88|DU4L5_HUMAN Double homeobox protein 4-like protein 5 OS=Homo sapiens GN=DUX4L5
PE=2 SV=1
Length = 424
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 278 ALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--------------RTPQ 323
AL+ C+++N YP + +L++ G+ +V WF+N R R R P
Sbjct: 33 ALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPP 92
Query: 324 Q-----RSIQRSRNA-LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
+ ++ S+ A L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>sp|P0CJ86|DU4L3_HUMAN Double homeobox protein 4-like protein 3 OS=Homo sapiens GN=DUX4L3
PE=2 SV=1
Length = 424
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 278 ALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--------------RTPQ 323
AL+ C+++N YP + +L++ G+ +V WF+N R R R P
Sbjct: 33 ALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPP 92
Query: 324 Q-----RSIQRSRNA-LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
+ ++ S+ A L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>sp|P0CJ85|DU4L2_HUMAN Double homeobox protein 4-like protein 2 OS=Homo sapiens GN=DUX4L2
PE=2 SV=1
Length = 424
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 278 ALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--------------RTPQ 323
AL+ C+++N YP + +L++ G+ +V WF+N R R R P
Sbjct: 33 ALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPP 92
Query: 324 Q-----RSIQRSRNA-LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
+ ++ S+ A L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>sp|Q9UBX2|DUX4_HUMAN Double homeobox protein 4 OS=Homo sapiens GN=DUX4 PE=2 SV=2
Length = 424
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 278 ALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--------------RTPQ 323
AL+ C+++N YP + +L++ G+ +V WF+N R R R P
Sbjct: 33 ALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPP 92
Query: 324 Q-----RSIQRSRNA-LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
+ ++ S+ A L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>sp|P0CJ87|DU4L4_HUMAN Double homeobox protein 4-like protein 4 OS=Homo sapiens GN=DUX4L4
PE=2 SV=1
Length = 422
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 278 ALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--------------RTPQ 323
AL+ C+++N YP + +L++ G+ +V WF+N R R R P
Sbjct: 33 ALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPP 92
Query: 324 Q-----RSIQRSRNA-LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
+ ++ S+ A L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>sp|Q96PT3|DUX5_HUMAN Double homeobox protein 5 OS=Homo sapiens GN=DUX5 PE=2 SV=1
Length = 197
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 277 NALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKN---------RRQRDRTPQQRSI 327
+AL+ C+++N YP K +L++ + +V WF+N RRQ P +R
Sbjct: 59 DALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDP 118
Query: 328 QRSRNA-----------LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
Q+ R L ++K+R+P + +L+ TGL +++ WF+NRR R R
Sbjct: 119 QKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRG 178
Query: 377 PQQRAKN 383
RA
Sbjct: 179 QSGRAPT 185
>sp|O43812|DUX1_HUMAN Double homeobox protein 1 OS=Homo sapiens GN=DUX1 PE=2 SV=1
Length = 170
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 20/125 (16%)
Query: 277 NALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKN---------RRQRDRTPQQRSI 327
+AL+ C+++N YP K +L++ + +V WF+N RRQ P +R
Sbjct: 32 DALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDP 91
Query: 328 QRSRNA-----------LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
Q+ R L ++K+R+P + +L+ TGL +++ WF+NRR R R
Sbjct: 92 QKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHRG 151
Query: 377 PQQRA 381
RA
Sbjct: 152 QSGRA 156
>sp|Q6RFH8|DUX4C_HUMAN Double homeobox protein 4C OS=Homo sapiens GN=DUX4L9 PE=1 SV=1
Length = 374
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 20/116 (17%)
Query: 278 ALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--------------RTPQ 323
AL+ C+++N YP + +L++ G+ +V WF+N R R R P
Sbjct: 33 ALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPP 92
Query: 324 Q-----RSIQRSRNA-LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
+ ++ S+ A L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>sp|Q96PT4|DUX3_HUMAN Putative double homeobox protein 3 OS=Homo sapiens GN=DUX3 PE=2
SV=1
Length = 197
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 20/117 (17%)
Query: 277 NALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKN---------RRQRDRTPQQRSI 327
+AL+ C+++N YP K QL++ + +V WF+N RRQ P +R
Sbjct: 59 DALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWPGRRDP 118
Query: 328 QRSRNA-----------LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
Q+ R L ++K+R+P + +L+ TGL +++ WF+NRR R
Sbjct: 119 QKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRAR 175
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR-----DRTPQQRSIQ 328
L ++K+R+P + +L+ TGL +++ WF+NRR R R P Q SI+
Sbjct: 136 LLRAFEKDRFPGIPAREELARETGLPESRIQLWFQNRRARHWGQSGRAPTQASIR 190
>sp|Q5U4X3|MEI3A_XENLA Homeobox protein meis3-A OS=Xenopus laevis GN=meis3-a PE=2 SV=1
Length = 453
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTFD---PYS 390
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NRT PYS
Sbjct: 294 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGGAPYS 344
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P
Sbjct: 294 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 328
>sp|Q6DIF3|MEIS3_XENTR Homeobox protein meis3 OS=Xenopus tropicalis GN=meis3 PE=2 SV=2
Length = 453
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTFD---PYS 390
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NRT PYS
Sbjct: 294 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGGAPYS 344
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P
Sbjct: 294 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 328
>sp|Q7ZY13|MEI3B_XENLA Homeobox protein meis3-B OS=Xenopus laevis GN=meis3-b PE=2 SV=2
Length = 451
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTFD---PYS 390
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NRT PYS
Sbjct: 294 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGGAPYS 344
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P
Sbjct: 294 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 328
>sp|O46339|HTH_DROME Homeobox protein homothorax OS=Drosophila melanogaster GN=hth PE=1
SV=1
Length = 487
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTF 386
YP+ D+K+QL++ TGLT+ QV+NWF N R+R P NR
Sbjct: 392 YPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAV 435
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
YP+ D+K+QL++ TGLT+ QV+NWF N R+R
Sbjct: 392 YPSEDQKKQLAQDTGLTILQVNNWFINARRR 422
>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
Length = 375
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NRT
Sbjct: 289 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRT 331
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P
Sbjct: 289 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 323
>sp|P97368|MEIS3_MOUSE Homeobox protein Meis3 OS=Mus musculus GN=Meis3 PE=2 SV=2
Length = 378
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NRT
Sbjct: 292 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRT 334
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P
Sbjct: 292 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 326
>sp|A6NDR6|ME3L1_HUMAN Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1
PE=5 SV=2
Length = 274
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NRT
Sbjct: 188 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRT 230
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P
Sbjct: 188 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 222
>sp|Q9JJN2|ZFHX4_MOUSE Zinc finger homeobox protein 4 OS=Mus musculus GN=Zfhx4 PE=1 SV=1
Length = 3550
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 42/139 (30%)
Query: 279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKN----RRQRDRT------------- 321
L+ +D N P+ ++ ++++E +GL+ V +WF+N RQR++
Sbjct: 2084 LRAYFDINNSPSEEQIQEMAEKSGLSQKVVKHWFRNTLFKERQRNKDSPYNFSNPPITVL 2143
Query: 322 ------PQQRSIQ-------------RSR------NALKECYDKNRYPNPDEKRQLSEIT 356
PQ S++ R+R L++ +D N YP DE QLS +
Sbjct: 2144 EDIRIDPQPTSLEHYKSDAAFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVL 2203
Query: 357 GLTLTQVSNWFKNRRQRDR 375
L + WF+N RQ+ R
Sbjct: 2204 NLPTRVIVVWFQNARQKAR 2222
Score = 38.5 bits (88), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
F + L++ +D N YP DE QLS + L + WF+N RQ+ R
Sbjct: 2173 FTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2222
>sp|P48786|PRH_PETCR Pathogenesis-related homeodomain protein OS=Petroselinum crispum
GN=PRH PE=2 SV=1
Length = 1088
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 273 ERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR---------------- 316
E + L + + +N+YP K L+ L++ QVSNWF NRR
Sbjct: 944 EHATQRLLQSFKENQYPQRAVKESLAAELALSVRQVSNWFNNRRWSFRHSSRIGSDVAKF 1003
Query: 317 QRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLT 359
+ TP+Q+SI S +LK D Y ++K Q + GLT
Sbjct: 1004 DSNDTPRQKSIDMSGPSLKSVLDSATYSEIEKKEQDTASLGLT 1046
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR 371
L + + +N+YP K L+ L++ QVSNWF NRR
Sbjct: 950 LLQSFKENQYPQRAVKESLAAELALSVRQVSNWFNNRR 987
>sp|E9PGG2|ANHX_HUMAN Anomalous homeobox protein OS=Homo sapiens GN=ANHX PE=2 SV=1
Length = 379
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 222 ELQQLWMRGHYKEHAKIRG-RDLGAVDKYRIRKKFPLPKTIWDGEETVYCFKE-RSRNAL 279
EL QLW HY+ + G L V K+R RK+ P P ++ C + +SRN
Sbjct: 93 ELVQLWNDIHYRLVMRRLGVAALTPVQKFRCRKRNPPPPSL--------CPEGLKSRNFP 144
Query: 280 KECYDK--------NRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
+E +K N P+ E+ L+ T LT QV NWF N R+R R
Sbjct: 145 REVREKLHNFAVGVNTNPSKAERENLALETSLTPEQVYNWFANYRRRQRA 194
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 316 RQRDRTPQQRSI----QRSRNALKECYDK--------NRYPNPDEKRQLSEITGLTLTQV 363
R R R P S+ +SRN +E +K N P+ E+ L+ T LT QV
Sbjct: 122 RCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVGVNTNPSKAERENLALETSLTPEQV 181
Query: 364 SNWFKNRRQRDRTPQQRAK 382
NWF N R+R R Q K
Sbjct: 182 YNWFANYRRRQRALPQHMK 200
>sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1
Length = 3567
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 42/139 (30%)
Query: 279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKN----RRQRDRT------------- 321
L+ +D N P+ ++ ++++E +GL+ + +WF+N RQR++
Sbjct: 2099 LRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQRNKDSPYNFSNPPITVL 2158
Query: 322 ------PQQRSIQ-------------RSR------NALKECYDKNRYPNPDEKRQLSEIT 356
PQ S++ R+R L++ +D N YP DE QLS +
Sbjct: 2159 EDIRIDPQPTSLEHYKSDASFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVL 2218
Query: 357 GLTLTQVSNWFKNRRQRDR 375
L + WF+N RQ+ R
Sbjct: 2219 NLPTRVIVVWFQNARQKAR 2237
Score = 38.5 bits (88), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
F + L++ +D N YP DE QLS + L + WF+N RQ+ R
Sbjct: 2188 FTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2237
>sp|Q5R6L1|PKNX2_PONAB Homeobox protein PKNOX2 OS=Pongo abelii GN=PKNOX2 PE=2 SV=1
Length = 472
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKN 383
YP DEKRQ++ T LTL QV+NWF N R+R P A N
Sbjct: 315 YPTEDEKRQIAAQTNLTLLQVNNWFVNARRRILQPMLDASN 355
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP DEKRQ++ T LTL QV+NWF N R+R P
Sbjct: 315 YPTEDEKRQIAAQTNLTLLQVNNWFVNARRRILQP 349
>sp|Q96KN3|PKNX2_HUMAN Homeobox protein PKNOX2 OS=Homo sapiens GN=PKNOX2 PE=1 SV=2
Length = 472
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKN 383
YP DEKRQ++ T LTL QV+NWF N R+R P A N
Sbjct: 315 YPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASN 355
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP DEKRQ++ T LTL QV+NWF N R+R P
Sbjct: 315 YPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQP 349
>sp|Q8BG99|PKNX2_MOUSE Homeobox protein PKNOX2 OS=Mus musculus GN=Pknox2 PE=2 SV=1
Length = 474
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKN 383
YP DEKRQ++ T LTL QV+NWF N R+R P A N
Sbjct: 315 YPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASN 355
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
YP DEKRQ++ T LTL QV+NWF N R+R P
Sbjct: 315 YPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQP 349
>sp|P79937|MEIS1_XENLA Homeobox protein Meis1 OS=Xenopus laevis GN=meis1 PE=1 SV=1
Length = 390
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTF 386
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NR
Sbjct: 299 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAV 342
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRNALKE 336
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P I +S A+ +
Sbjct: 299 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPM---IDQSNRAVSQ 344
>sp|Q60954|MEIS1_MOUSE Homeobox protein Meis1 OS=Mus musculus GN=Meis1 PE=1 SV=1
Length = 390
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTF 386
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NR
Sbjct: 299 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAV 342
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRNALKE 336
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P I +S A+ +
Sbjct: 299 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPM---IDQSNRAVSQ 344
>sp|O00470|MEIS1_HUMAN Homeobox protein Meis1 OS=Homo sapiens GN=MEIS1 PE=1 SV=1
Length = 390
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTF 386
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P NR
Sbjct: 299 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAV 342
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRNALKE 336
YP+ ++K+QL++ TGLT+ QV+NWF N R+R P I +S A+ +
Sbjct: 299 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPM---IDQSNRAVSQ 344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,863,849
Number of Sequences: 539616
Number of extensions: 6270045
Number of successful extensions: 18531
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 16611
Number of HSP's gapped (non-prelim): 2066
length of query: 390
length of database: 191,569,459
effective HSP length: 119
effective length of query: 271
effective length of database: 127,355,155
effective search space: 34513247005
effective search space used: 34513247005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)