AmiGO: BLAST Results


BLAST match view associations BLAST with Six4 Six4 Six4	protein from Drosophila melanogaster	6.3e-69
BLAST match view associations BLAST with six4a six4a six4a sine oculis homeobox homolog 4a	gene_product from Danio rerio	8.5e-65
BLAST match view associations BLAST with Six4 Six4 Six4 sine oculis-related homeobox 4	protein from Mus musculus	1.4e-64
BLAST match view associations BLAST with Six4 Six4 Six4 SIX homeobox 4	gene from Rattus norvegicus	1.4e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Homeobox protein SIX4	protein from Homo sapiens	3.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Homeobox protein SIX4	protein from Homo sapiens	3.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Canis lupus familiaris	4.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Canis lupus familiaris	4.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Canis lupus familiaris	4.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Canis lupus familiaris	4.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Sus scrofa	4.7e-64
BLAST match view associations BLAST with six4b six4b six4b sine oculis homeobox homolog 4b	gene_product from Danio rerio	5.4e-63
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Uncharacterized protein	protein from Gallus gallus	1.6e-61
BLAST match view associations BLAST with LOC100525814 LOC100525814 LOC100525814 Uncharacterized protein	protein from Sus scrofa	5.5e-61
BLAST match view associations BLAST with Six2 Six2 Six2 sine oculis-related homeobox 2	protein from Mus musculus	5.5e-61
BLAST match view associations BLAST with Six2 Six2 Six2 SIX homeobox 2	gene from Rattus norvegicus	5.5e-61
BLAST match view associations BLAST with six4.3 six4.3 six4.3 sine oculis homeobox homolog 4.3	gene_product from Danio rerio	8.3e-61
BLAST match view associations BLAST with SIX2 SIX2 SIX2 Homeobox protein SIX2	protein from Homo sapiens	1.2e-60
BLAST match view associations BLAST with six1b six1b six1b sine oculis homeobox homolog 1b	gene_product from Danio rerio	1.5e-60
BLAST match view associations BLAST with SIX2 SIX2 SIX2 Uncharacterized protein	protein from Bos taurus	3.1e-60
BLAST match view associations BLAST with SIX2 SIX2 SIX2 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Uncharacterized protein	protein from Bos taurus	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Homeobox protein SIX1	protein from Homo sapiens	3.1e-60
BLAST match view associations BLAST with Six1 Six1 Six1 Six homeobox 1	protein from Sus scrofa	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Homeobox protein SIX1	protein from Gorilla gorilla gorilla	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Homeobox protein SIX1	protein from Lagothrix lagotricha	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Uncharacterized protein	protein from Ailuropoda melanoleuca	3.1e-60
BLAST match view associations BLAST with D3U1G0 D3U1G0 D3U1G0 Six1	protein from Ovis aries	3.1e-60
BLAST match view associations BLAST with Six1 Six1 Six1 sine oculis-related homeobox 1	protein from Mus musculus	3.1e-60
BLAST match view associations BLAST with six2a six2a six2a sine oculis-related homeobox 2a	gene_product from Danio rerio	3.1e-60
BLAST match view associations BLAST with SIX5 SIX5 SIX5 Uncharacterized protein	protein from Bos taurus	3.1e-60
BLAST match view associations BLAST with SIX5 SIX5 SIX5 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-60
BLAST match view associations BLAST with SIX5 SIX5 SIX5 Homeobox protein SIX5	protein from Homo sapiens	3.1e-60
BLAST match view associations BLAST with Six5 Six5 Six5 sine oculis-related homeobox 5	protein from Mus musculus	3.1e-60
BLAST match view associations BLAST with six1a six1a six1a sine oculis homeobox homolog 1a	gene_product from Danio rerio	1.0e-59
BLAST match view associations BLAST with Six1 Six1 Six1 SIX homeobox 1	gene from Rattus norvegicus	2.2e-59
BLAST match view associations BLAST with six2b six2b six2b sine oculis-related homeobox 2b	gene_product from Danio rerio	3.5e-59
BLAST match view associations BLAST with so so so sine oculis	protein from Drosophila melanogaster	4.5e-59
BLAST match view associations BLAST with SIX3 SIX3 SIX3 Homeobox protein SIX3	protein from Gallus gallus	3.3e-56
BLAST match view associations BLAST with SIX3 SIX3 SIX3 Uncharacterized protein	protein from Bos taurus	3.3e-56
BLAST match view associations BLAST with SIX3 SIX3 SIX3 Uncharacterized protein	protein from Canis lupus familiaris	3.3e-56
BLAST match view associations BLAST with SIX3 SIX3 SIX3 Homeobox protein SIX3	protein from Homo sapiens	3.3e-56
BLAST match view associations BLAST with Six3 Six3 Six3 sine oculis-related homeobox 3	protein from Mus musculus	3.3e-56
BLAST match view associations BLAST with Six3 Six3 Six3 SIX homeobox 3	gene from Rattus norvegicus	3.3e-56
BLAST match view associations BLAST with six3a six3a six3a sine oculis homeobox homolog 3a	gene_product from Danio rerio	4.2e-56
BLAST match view associations BLAST with SIX6 SIX6 SIX6 Uncharacterized protein	protein from Canis lupus familiaris	8.6e-56
BLAST match view associations BLAST with LOC100519236 LOC100519236 LOC100519236 Uncharacterized protein	protein from Sus scrofa	1.8e-55
BLAST match view associations BLAST with six6b six6b six6b sine oculis-related homeobox 6b	gene_product from Danio rerio	1.8e-55
BLAST match view associations BLAST with SIX6 SIX6 SIX6 Homeobox protein SIX6	protein from Homo sapiens	2.3e-55
BLAST match view associations BLAST with Six6 Six6 Six6 sine oculis-related homeobox 6	protein from Mus musculus	2.3e-55
BLAST match view associations BLAST with Six6 Six6 Six6 SIX homeobox 6	gene from Rattus norvegicus	2.3e-55
BLAST match view associations BLAST with SIX6 SIX6 SIX6 Homeobox protein SIX6	protein from Gallus gallus	3.7e-55
BLAST match view associations BLAST with six3b six3b six3b sine oculis homeobox homolog 3b	gene_product from Danio rerio	6.1e-55
BLAST match view associations BLAST with six6a six6a six6a sine oculis-related homeobox 6a	gene_product from Danio rerio	7.8e-55
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Gallus gallus	7.8e-55
BLAST match view associations BLAST with Optix Optix Optix	protein from Drosophila melanogaster	3.0e-53
BLAST match view associations BLAST with six7 six7 six7 sine oculis homeobox homolog 7	gene_product from Danio rerio	1.3e-52
BLAST match view associations BLAST with six9 six9 six9 sine oculis homeobox homolog 9	gene_product from Danio rerio	1.7e-52
BLAST match view associations BLAST with ceh-33 ceh-33 ceh-33	gene from Caenorhabditis elegans	8.3e-51
BLAST match view associations BLAST with ceh-32 ceh-32 ceh-32	gene from Caenorhabditis elegans	9.5e-50
BLAST match view associations BLAST with ceh-34 ceh-34 ceh-34	gene from Caenorhabditis elegans	5.0e-44
BLAST match view associations BLAST with Six5 Six5 Six5 SIX homeobox 5	gene from Rattus norvegicus	5.9e-35
BLAST match view associations BLAST with unc-39 unc-39 unc-39	gene from Caenorhabditis elegans	1.3e-34
BLAST match view associations BLAST with unc-39 unc-39 unc-39 Protein UNC-39	protein from Caenorhabditis elegans	1.3e-34
BLAST match view associations BLAST with ceh-88 ceh-88 ceh-88	gene from Caenorhabditis elegans	1.1e-06
BLAST match view associations BLAST with DUX1 DUX1 DUX1 Double homeobox protein 1	protein from Homo sapiens	1.9e-06
BLAST match view associations BLAST with DUX5 DUX5 DUX5 Double homeobox protein 5	protein from Homo sapiens	5.0e-06
BLAST match view associations BLAST with MEIS1 MEIS1 MEIS1 Homeobox protein Meis1	protein from Homo sapiens	9.1e-06
BLAST match view associations BLAST with E2QZ93 E2QZ93 E2QZ93 Uncharacterized protein	protein from Canis lupus familiaris	9.5e-06
BLAST match view associations BLAST with ANHX ANHX ANHX Uncharacterized protein	protein from Canis lupus familiaris	9.6e-06
BLAST match view associations BLAST with DUX3 DUX3 DUX3 Putative double homeobox protein 3	protein from Homo sapiens	1.8e-05
BLAST match view associations BLAST with ceh-28 ceh-28 ceh-28	gene from Caenorhabditis elegans	4.8e-05
BLAST match view associations BLAST with ceh-28 ceh-28 ceh-28 Protein CEH-28	protein from Caenorhabditis elegans	4.8e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with MTLA1 MTLA1 MTLA1	gene_product from Candida albicans	5.9e-05
BLAST match view associations BLAST with MTLA1 MTLA1 MTLA1 Mating-type-like protein A1	protein from Candida albicans SC5314	5.9e-05
BLAST match view associations BLAST with Duxbl1 Duxbl1 Duxbl1 double homeobox B-like 1	gene from Rattus norvegicus	0.00011
BLAST match view associations BLAST with ceh-100 ceh-100 ceh-100	gene from Caenorhabditis elegans	0.00012
BLAST match view associations BLAST with ANHX ANHX ANHX Uncharacterized protein	protein from Bos taurus	0.00016
BLAST match view associations BLAST with PKNOX1 PKNOX1 PKNOX1 Homeobox protein PKNOX1	protein from Homo sapiens	0.00018
BLAST match view associations BLAST with PKNOX1 PKNOX1 PKNOX1 Homeobox protein PKNOX1	protein from Homo sapiens	0.00018
BLAST match view associations BLAST with PITX2 PITX2 PITX2 Pituitary homeobox 2	protein from Homo sapiens	0.00018
BLAST match view associations BLAST with CG11617 CG11617 CG11617	protein from Drosophila melanogaster	0.00021
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy8148
        (390 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0027364 - symbol:Six4 "Six4" species:7227 "Drosoph...   699  6.3e-69   1
ZFIN|ZDB-GENE-010201-2 - symbol:six4a "sine oculis homeob...   660  8.5e-65   1
MGI|MGI:106034 - symbol:Six4 "sine oculis-related homeobo...   658  1.4e-64   1
RGD|1306726 - symbol:Six4 "SIX homeobox 4" species:10116 ...   658  1.4e-64   1
UNIPROTKB|G3V2N2 - symbol:SIX4 "Homeobox protein SIX4" sp...   654  3.7e-64   1
UNIPROTKB|Q9UIU6 - symbol:SIX4 "Homeobox protein SIX4" sp...   654  3.7e-64   1
UNIPROTKB|E2QVI7 - symbol:SIX4 "Uncharacterized protein" ...   653  4.7e-64   1
UNIPROTKB|F6XRS2 - symbol:SIX4 "Uncharacterized protein" ...   653  4.7e-64   1
UNIPROTKB|J9NXQ2 - symbol:SIX4 "Uncharacterized protein" ...   653  4.7e-64   1
UNIPROTKB|J9P424 - symbol:SIX4 "Uncharacterized protein" ...   653  4.7e-64   1
UNIPROTKB|F1SRW3 - symbol:SIX4 "Uncharacterized protein" ...   653  4.7e-64   1
ZFIN|ZDB-GENE-010201-1 - symbol:six4b "sine oculis homeob...   643  5.4e-63   1
UNIPROTKB|F1NQK9 - symbol:SIX4 "Uncharacterized protein" ...   629  1.6e-61   1
UNIPROTKB|F1NQL0 - symbol:SIX4 "Uncharacterized protein" ...   627  2.7e-61   1
UNIPROTKB|F1S5K5 - symbol:SIX2 "Uncharacterized protein" ...   624  5.5e-61   1
MGI|MGI:102778 - symbol:Six2 "sine oculis-related homeobo...   624  5.5e-61   1
RGD|1310792 - symbol:Six2 "SIX homeobox 2" species:10116 ...   624  5.5e-61   1
ZFIN|ZDB-GENE-010201-3 - symbol:six4.3 "sine oculis homeo...   627  8.3e-61   1
UNIPROTKB|Q9NPC8 - symbol:SIX2 "Homeobox protein SIX2" sp...   621  1.2e-60   1
ZFIN|ZDB-GENE-040426-2308 - symbol:six1b "sine oculis hom...   620  1.5e-60   1
UNIPROTKB|E1BJ27 - symbol:SIX2 "Uncharacterized protein" ...   617  3.1e-60   1
UNIPROTKB|E2R181 - symbol:SIX2 "Uncharacterized protein" ...   617  3.1e-60   1
UNIPROTKB|Q08DI4 - symbol:SIX1 "SIX1 protein" species:991...   617  3.1e-60   1
UNIPROTKB|J9P3S7 - symbol:SIX1 "Uncharacterized protein" ...   617  3.1e-60   1
UNIPROTKB|Q15475 - symbol:SIX1 "Homeobox protein SIX1" sp...   617  3.1e-60   1
UNIPROTKB|E5DCJ4 - symbol:Six1 "Uncharacterized protein" ...   617  3.1e-60   1
UNIPROTKB|A1YER0 - symbol:SIX1 "Homeobox protein SIX1" sp...   617  3.1e-60   1
UNIPROTKB|A2D5H2 - symbol:SIX1 "Homeobox protein SIX1" sp...   617  3.1e-60   1
UNIPROTKB|D2GVS4 - symbol:SIX1 "Uncharacterized protein" ...   617  3.1e-60   1
UNIPROTKB|D3U1G0 - symbol:D3U1G0 "Six1" species:9940 "Ovi...   617  3.1e-60   1
MGI|MGI:102780 - symbol:Six1 "sine oculis-related homeobo...   617  3.1e-60   1
UNIPROTKB|G3V970 - symbol:Six1 "Protein Six1" species:101...   617  3.1e-60   1
ZFIN|ZDB-GENE-010412-1 - symbol:six2a "sine oculis-relate...   617  3.1e-60   1
UNIPROTKB|E1BAD7 - symbol:SIX5 "Uncharacterized protein" ...   617  3.1e-60   1
UNIPROTKB|F1PSK1 - symbol:SIX5 "Uncharacterized protein" ...   617  3.1e-60   1
UNIPROTKB|Q8N196 - symbol:SIX5 "Homeobox protein SIX5" sp...   617  3.1e-60   1
MGI|MGI:106220 - symbol:Six5 "sine oculis-related homeobo...   617  3.1e-60   1
ZFIN|ZDB-GENE-040718-155 - symbol:six1a "sine oculis home...   612  1.0e-59   1
RGD|620906 - symbol:Six1 "SIX homeobox 1" species:10116 "...   609  2.2e-59   1
ZFIN|ZDB-GENE-080723-23 - symbol:six2b "sine oculis-relat...   607  3.5e-59   1
FB|FBgn0003460 - symbol:so "sine oculis" species:7227 "Dr...   606  4.5e-59   1
UNIPROTKB|O42406 - symbol:SIX3 "Homeobox protein SIX3" sp...   579  3.3e-56   1
UNIPROTKB|E1BMT1 - symbol:SIX3 "Uncharacterized protein" ...   579  3.3e-56   1
UNIPROTKB|E2R195 - symbol:SIX3 "Uncharacterized protein" ...   579  3.3e-56   1
UNIPROTKB|O95343 - symbol:SIX3 "Homeobox protein SIX3" sp...   579  3.3e-56   1
MGI|MGI:102764 - symbol:Six3 "sine oculis-related homeobo...   579  3.3e-56   1
RGD|620909 - symbol:Six3 "SIX homeobox 3" species:10116 "...   579  3.3e-56   1
UNIPROTKB|E9PTM1 - symbol:Six3 "Protein Six3" species:101...   579  3.3e-56   1
ZFIN|ZDB-GENE-990415-127 - symbol:six3a "sine oculis home...   578  4.2e-56   1
UNIPROTKB|F1PN35 - symbol:SIX6 "Uncharacterized protein" ...   575  8.6e-56   1
UNIPROTKB|F1SSH9 - symbol:SIX6 "Uncharacterized protein" ...   572  1.8e-55   1
ZFIN|ZDB-GENE-050522-308 - symbol:six6b "sine oculis-rela...   572  1.8e-55   1
UNIPROTKB|O95475 - symbol:SIX6 "Homeobox protein SIX6" sp...   571  2.3e-55   1
MGI|MGI:1341840 - symbol:Six6 "sine oculis-related homeob...   571  2.3e-55   1
RGD|1310497 - symbol:Six6 "SIX homeobox 6" species:10116 ...   571  2.3e-55   1
UNIPROTKB|O93307 - symbol:SIX6 "Homeobox protein SIX6" sp...   569  3.7e-55   1
ZFIN|ZDB-GENE-990415-128 - symbol:six3b "sine oculis home...   567  6.1e-55   1
ZFIN|ZDB-GENE-040426-1282 - symbol:six6a "sine oculis-rel...   566  7.8e-55   1
UNIPROTKB|F1NHV5 - symbol:SIX4 "Uncharacterized protein" ...   566  7.8e-55   1
FB|FBgn0025360 - symbol:Optix "Optix" species:7227 "Droso...   551  3.0e-53   1
ZFIN|ZDB-GENE-990825-28 - symbol:six7 "sine oculis homeob...   545  1.3e-52   1
ZFIN|ZDB-GENE-990621-11 - symbol:six9 "sine oculis homeob...   544  1.7e-52   1
WB|WBGene00000454 - symbol:ceh-33 species:6239 "Caenorhab...   528  8.3e-51   1
WB|WBGene00000453 - symbol:ceh-32 species:6239 "Caenorhab...   518  9.5e-50   1
WB|WBGene00000455 - symbol:ceh-34 species:6239 "Caenorhab...   464  5.0e-44   1
RGD|1305040 - symbol:Six5 "SIX homeobox 5" species:10116 ...   235  5.9e-35   2
WB|WBGene00006775 - symbol:unc-39 species:6239 "Caenorhab...   375  1.3e-34   1
UNIPROTKB|O17894 - symbol:unc-39 "Protein UNC-39" species...   375  1.3e-34   1
WB|WBGene00008195 - symbol:ceh-88 species:6239 "Caenorhab...   120  1.1e-06   2
UNIPROTKB|O43812 - symbol:DUX1 "Double homeobox protein 1...    94  1.9e-06   2
UNIPROTKB|D4A2Z5 - symbol:RGD1563833 "Protein RGD1563833"...    93  1.9e-06   2
UNIPROTKB|Q96PT3 - symbol:DUX5 "Double homeobox protein 5...    94  5.0e-06   2
UNIPROTKB|E9PC25 - symbol:MEIS1 "Homeobox protein Meis1" ...   111  9.1e-06   1
UNIPROTKB|E2QZ93 - symbol:E2QZ93 "Uncharacterized protein...   132  9.5e-06   1
UNIPROTKB|F6XTX4 - symbol:ANHX "Uncharacterized protein" ...   132  9.6e-06   1
UNIPROTKB|F1NQQ8 - symbol:IRX2 "Uncharacterized protein" ...   109  1.5e-05   1
UNIPROTKB|Q96PT4 - symbol:DUX3 "Putative double homeobox ...    87  1.8e-05   2
WB|WBGene00000450 - symbol:ceh-28 species:6239 "Caenorhab...   119  4.8e-05   1
UNIPROTKB|G5EE18 - symbol:ceh-28 "NK-2 family homeodomain...   119  4.8e-05   1
UNIPROTKB|F8VW34 - symbol:TGIF1 "Homeobox protein TGIF1" ...   104  5.3e-05   1
UNIPROTKB|F8VX54 - symbol:TGIF1 "Homeobox protein TGIF1" ...   104  5.3e-05   1
UNIPROTKB|F8VXG3 - symbol:TGIF1 "Homeobox protein TGIF1" ...   104  5.3e-05   1
UNIPROTKB|F8VYL4 - symbol:TGIF1 "Homeobox protein TGIF1" ...   104  5.3e-05   1
UNIPROTKB|F8VZH2 - symbol:TGIF1 "Homeobox protein TGIF1" ...   104  5.3e-05   1
UNIPROTKB|F1LTM6 - symbol:F1LTM6 "Uncharacterized protein...   104  5.3e-05   1
CGD|CAL0003187 - symbol:MTLA1 species:5476 "Candida albic...   119  5.9e-05   1
UNIPROTKB|Q9UW23 - symbol:MTLA1 "Mating-type-like protein...   119  5.9e-05   1
RGD|1311053 - symbol:Duxbl1 "double homeobox B-like 1" sp...    99  0.00011   2
WB|WBGene00012584 - symbol:ceh-100 species:6239 "Caenorha...   129  0.00012   1
UNIPROTKB|F1M6P9 - symbol:F1M6P9 "Uncharacterized protein...   100  0.00014   1
UNIPROTKB|E1BAI9 - symbol:LOC531406 "Uncharacterized prot...   121  0.00016   1
UNIPROTKB|F1NQR0 - symbol:IRX2 "Uncharacterized protein" ...    99  0.00018   1
UNIPROTKB|F1NQR4 - symbol:IRX2 "Uncharacterized protein" ...    99  0.00018   1
UNIPROTKB|F1NQR5 - symbol:IRX2 "Uncharacterized protein" ...    99  0.00018   1
UNIPROTKB|F6RKD0 - symbol:IRX2 "Uncharacterized protein" ...    99  0.00018   1
UNIPROTKB|H0YKV5 - symbol:PKNOX1 "Homeobox protein PKNOX1...    99  0.00018   1
UNIPROTKB|H0YMX0 - symbol:PKNOX1 "Homeobox protein PKNOX1...    99  0.00018   1
UNIPROTKB|D6RBG8 - symbol:PITX2 "Pituitary homeobox 2" sp...    99  0.00018   1
FB|FBgn0031232 - symbol:CG11617 species:7227 "Drosophila ...   118  0.00021   1
UNIPROTKB|F1NEV7 - symbol:IRX6 "Uncharacterized protein" ...    98  0.00023   1

WARNING:  Descriptions of 19 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0027364 [details] [associations]
            symbol:Six4 "Six4" species:7227 "Drosophila melanogaster"
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0008406
            "gonad development" evidence=IMP;NAS] [GO:0007520 "myoblast fusion"
            evidence=IMP] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0007498 "mesoderm
            development" evidence=IMP] [GO:0007503 "fat body development"
            evidence=IMP] [GO:0048812 "neuron projection morphogenesis"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 EMBL:AE014296 GO:GO:0008406
            GO:GO:0007498 GO:GO:0043565 GO:GO:0007503 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007520
            GeneTree:ENSGT00540000070251 HSSP:P41778 CTD:51804 EMBL:AF099185
            EMBL:AF247709 EMBL:BT028820 EMBL:BT031315 RefSeq:NP_649256.1
            RefSeq:NP_730566.1 UniGene:Dm.3120 SMR:Q9Y1P6 STRING:Q9Y1P6
            EnsemblMetazoa:FBtr0078274 EnsemblMetazoa:FBtr0078275 GeneID:40297
            KEGG:dme:Dmel_CG3871 UCSC:CG3871-RA FlyBase:FBgn0027364
            InParanoid:Q9Y1P6 OMA:ARAMVAY OrthoDB:EOG49KD6M GenomeRNAi:40297
            NextBio:818046 Uniprot:Q9Y1P6
        Length = 392

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 126/179 (70%), Positives = 146/179 (81%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             + F+ +QI C+CEA+QQ GD +KL  FL SLPP E  +  ESVLRARA+VAY    FHEL
Sbjct:   179 LQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFKTNESVLRARAMVAYNLGQFHEL 238

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y +LE+H F  KYH +LQ LW + HYKE  K+RGR LGAVDKYR+RKK+PLPKTIWDGEE
Sbjct:   239 YNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEE 298

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQR 325
             TVYCFKE+SRNALK+CY  NRYP PDEK+ L++ TGLTLTQVSNWFKNRRQRDRTPQQR
Sbjct:   299 TVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQQR 357

 Score = 313 (115.2 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
 Identities = 57/98 (58%), Positives = 70/98 (71%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             + F+ +QI C+CEA+QQ GD +KL  FL SLPP E  +  ESVLRARA+VAY    FHEL
Sbjct:   179 LQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFKTNESVLRARAMVAYNLGQFHEL 238

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y +LE+H F  KYH +LQ LW + HYKE  K+RGR LG
Sbjct:   239 YNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLG 276

 Score = 231 (86.4 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
 Identities = 42/53 (79%), Positives = 48/53 (90%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQR 380
             ++SRNALK+CY  NRYP PDEK+ L++ TGLTLTQVSNWFKNRRQRDRTPQQR
Sbjct:   305 EKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQQR 357


>ZFIN|ZDB-GENE-010201-2 [details] [associations]
            symbol:six4a "sine oculis homeobox homolog 4a"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-010201-2 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HOGENOM:HOG000261651 EMBL:AB045623 IPI:IPI00490924 UniGene:Dr.79388
            ProteinModelPortal:Q9DEC1 PRIDE:Q9DEC1 HOVERGEN:HBG098508
            InParanoid:Q9DEC1 NextBio:20902030 ArrayExpress:Q9DEC1
            Uniprot:Q9DEC1
        Length = 595

 Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
 Identities = 116/179 (64%), Positives = 147/179 (82%)

Query:   146 NMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHE 205
             +++F+PEQ+ C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+LRA+A+VA+ +  + E
Sbjct:    79 SLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILRAQALVAFHQARYQE 138

Query:   206 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGE 265
             LY+ILESH+F    H+ LQ LW +  Y E  K RGR LGAVDKYR+R+KFPLP+TIWDGE
Sbjct:   139 LYSILESHSFSPSCHSALQDLWYKARYTEAEKARGRPLGAVDKYRLRRKFPLPRTIWDGE 198

Query:   266 ETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             ETVYCFKERSRNALK+ Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   199 ETVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSE 257

 Score = 297 (109.6 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 52/99 (52%), Positives = 73/99 (73%)

Query:     7 NMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHE 66
             +++F+PEQ+ C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+LRA+A+VA+ +  + E
Sbjct:    79 SLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILRAQALVAFHQARYQE 138

Query:    67 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             LY+ILESH+F    H+ LQ LW +  Y E  K RGR LG
Sbjct:   139 LYSILESHSFSPSCHSALQDLWYKARYTEAEKARGRPLG 177

 Score = 212 (79.7 bits), Expect = 2.4e-14, P = 2.4e-14
 Identities = 51/118 (43%), Positives = 71/118 (60%)

Query:   269 YCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR-QRDRT--PQQR 325
             + F     +AL++ + K RY   ++ R      G  L  V  +   R+    RT    + 
Sbjct:   146 HSFSPSCHSALQDLWYKARYTEAEKAR------GRPLGAVDKYRLRRKFPLPRTIWDGEE 199

Query:   326 SI----QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++    +RSRNALK+ Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   200 TVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSE 257


>MGI|MGI:106034 [details] [associations]
            symbol:Six4 "sine oculis-related homeobox 4" species:10090
            "Mus musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
            development" evidence=IGI] [GO:0008582 "regulation of synaptic
            growth at neuromuscular junction" evidence=IGI] [GO:0010468
            "regulation of gene expression" evidence=IGI] [GO:0032880
            "regulation of protein localization" evidence=IGI] [GO:0042472
            "inner ear morphogenesis" evidence=IGI] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IMP;IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048538 "thymus
            development" evidence=IGI] [GO:0048699 "generation of neurons"
            evidence=IMP] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IGI] [GO:0048856 "anatomical structure
            development" evidence=IGI] [GO:0051451 "myoblast migration"
            evidence=IGI] [GO:0072075 "metanephric mesenchyme development"
            evidence=IMP] [GO:0072095 "regulation of branch elongation involved
            in ureteric bud branching" evidence=IMP] [GO:0072107 "positive
            regulation of ureteric bud formation" evidence=IMP] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:106034 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043565 GO:GO:0045944 GO:GO:0043524 GO:GO:0003700
            GO:GO:0032880 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
            GO:GO:0048538 GO:GO:0090190 GO:GO:0048701 GO:GO:0008582
            GO:GO:0072075 GO:GO:0007519 GO:GO:0048699 GO:GO:0072107
            GeneTree:ENSGT00540000070251 GO:GO:0072095 GO:GO:0051451 CTD:51804
            eggNOG:NOG244874 HOGENOM:HOG000261651 HOVERGEN:HBG017802 KO:K15615
            OMA:NAQVNAN OrthoDB:EOG4F7NJN EMBL:D50416 EMBL:D50417 EMBL:D50418
            EMBL:BC137931 EMBL:BC137934 IPI:IPI00119946 IPI:IPI00223009
            IPI:IPI00468761 PIR:S63626 PIR:S63628 PIR:S63629 RefSeq:NP_035512.1
            UniGene:Mm.249575 ProteinModelPortal:Q61321 SMR:Q61321
            IntAct:Q61321 STRING:Q61321 PhosphoSite:Q61321 PRIDE:Q61321
            Ensembl:ENSMUST00000043208 GeneID:20474 KEGG:mmu:20474
            UCSC:uc007nwb.1 InParanoid:B2RQH3 NextBio:298591 Bgee:Q61321
            Genevestigator:Q61321 GermOnline:ENSMUSG00000034460 Uniprot:Q61321
        Length = 775

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 116/180 (64%), Positives = 148/180 (82%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + 
Sbjct:    97 PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDG
Sbjct:   157 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDG 216

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EETVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   217 EETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 276

 Score = 295 (108.9 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
 Identities = 52/100 (52%), Positives = 74/100 (74%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + 
Sbjct:    97 PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   157 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 196

 Score = 211 (79.3 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   225 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 276


>RGD|1306726 [details] [associations]
            symbol:Six4 "SIX homeobox 4" species:10116 "Rattus norvegicus"
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0007519 "skeletal muscle tissue development" evidence=ISO]
            [GO:0008582 "regulation of synaptic growth at neuromuscular
            junction" evidence=ISO] [GO:0010468 "regulation of gene expression"
            evidence=ISO] [GO:0032880 "regulation of protein localization"
            evidence=ISO] [GO:0042472 "inner ear morphogenesis" evidence=ISO]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0048538 "thymus development" evidence=ISO]
            [GO:0048699 "generation of neurons" evidence=ISO] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=ISO]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
            [GO:0048856 "anatomical structure development" evidence=ISO]
            [GO:0051451 "myoblast migration" evidence=ISO] [GO:0072075
            "metanephric mesenchyme development" evidence=ISO] [GO:0072095
            "regulation of branch elongation involved in ureteric bud
            branching" evidence=ISO] [GO:0072107 "positive regulation of
            ureteric bud formation" evidence=ISO] [GO:0090190 "positive
            regulation of branching involved in ureteric bud morphogenesis"
            evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1306726 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0048538 GO:GO:0090190 GO:GO:0048701
            GO:GO:0072075 GO:GO:0007519 GO:GO:0048699 GO:GO:0072107
            GO:GO:0072095 GO:GO:0051451 OMA:NAQVNAN IPI:IPI00564711
            Ensembl:ENSRNOT00000009506 UCSC:RGD:1306726 ArrayExpress:D3ZS83
            Uniprot:D3ZS83
        Length = 775

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 116/180 (64%), Positives = 148/180 (82%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + 
Sbjct:    97 PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDG
Sbjct:   157 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDG 216

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EETVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   217 EETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 276

 Score = 295 (108.9 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
 Identities = 52/100 (52%), Positives = 74/100 (74%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + 
Sbjct:    97 PPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYP 156

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   157 ELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 196

 Score = 211 (79.3 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   225 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 276


>UNIPROTKB|G3V2N2 [details] [associations]
            symbol:SIX4 "Homeobox protein SIX4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 EMBL:AL132777 HGNC:HGNC:10890
            ProteinModelPortal:G3V2N2 SMR:G3V2N2 Ensembl:ENST00000556952
            ArrayExpress:G3V2N2 Bgee:G3V2N2 Uniprot:G3V2N2
        Length = 521

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 122/221 (55%), Positives = 163/221 (73%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:    98 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 157

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDGEE
Sbjct:   158 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 217

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRS 326
             TVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +  
Sbjct:   218 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQ 277

Query:   327 IQRSRNALKECYDKNRYPNPD-EKRQLSEIT-GLTLTQVSN 365
              +   +      D++   + D     LS  + G+T   +S+
Sbjct:   278 SKSESDGNPSTEDESSKGHEDLSPHPLSSSSDGITNLSLSS 318

 Score = 290 (107.1 bits), Expect = 5.2e-45, Sum P(2) = 5.2e-45
 Identities = 51/98 (52%), Positives = 73/98 (74%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:    98 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 157

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   158 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 195

 Score = 211 (79.3 bits), Expect = 5.2e-45, Sum P(2) = 5.2e-45
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   224 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 275

 Score = 51 (23.0 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query:   107 SSDDSSPVLYETNAHDFNKHYLEIQQKAQEYLNMKKLNPNMSFTPEQIDCLCEAMQQSGD 166
             +S D   V+  T     N++   I Q      N + LN ++ F+P Q+  +  A  Q GD
Sbjct:   454 ASQDGGSVVTFTTPVQINQY--GIVQIPNSGANSQFLNGSIGFSPLQLPPVSVAASQGGD 511


>UNIPROTKB|Q9UIU6 [details] [associations]
            symbol:SIX4 "Homeobox protein SIX4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0007519 "skeletal muscle tissue
            development" evidence=IEA] [GO:0008582 "regulation of synaptic
            growth at neuromuscular junction" evidence=IEA] [GO:0032880
            "regulation of protein localization" evidence=IEA] [GO:0042472
            "inner ear morphogenesis" evidence=IEA] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0048699 "generation of neurons" evidence=IEA] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IEA]
            [GO:0051451 "myoblast migration" evidence=IEA] [GO:0072075
            "metanephric mesenchyme development" evidence=IEA] [GO:0072095
            "regulation of branch elongation involved in ureteric bud
            branching" evidence=IEA] [GO:0072107 "positive regulation of
            ureteric bud formation" evidence=IEA] [GO:0090190 "positive
            regulation of branching involved in ureteric bud morphogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009653
            "anatomical structure morphogenesis" evidence=TAS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 EMBL:CH471061 GO:GO:0043565 GO:GO:0045944
            GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0048538 GO:GO:0090190 GO:GO:0009653
            GO:GO:0048701 GO:GO:0072075 GO:GO:0007519 GO:GO:0048699
            GO:GO:0072107 GO:GO:0072095 GO:GO:0051451 EMBL:AB024687
            EMBL:AL132777 EMBL:BC098135 EMBL:BC098282 EMBL:BC099722
            EMBL:BC101934 IPI:IPI00006525 RefSeq:NP_059116.3 UniGene:Hs.690393
            UniGene:Hs.97849 ProteinModelPortal:Q9UIU6 SMR:Q9UIU6 STRING:Q9UIU6
            PhosphoSite:Q9UIU6 DMDM:254763333 PRIDE:Q9UIU6 DNASU:51804
            Ensembl:ENST00000216513 GeneID:51804 KEGG:hsa:51804 UCSC:uc001xfc.3
            CTD:51804 GeneCards:GC14M061176 H-InvDB:HIX0037650 HGNC:HGNC:10890
            HPA:HPA031794 MIM:606342 neXtProt:NX_Q9UIU6 PharmGKB:PA35790
            eggNOG:NOG244874 HOGENOM:HOG000261651 HOVERGEN:HBG017802
            InParanoid:Q9UIU6 KO:K15615 OMA:NAQVNAN OrthoDB:EOG4F7NJN
            GenomeRNAi:51804 NextBio:55920 ArrayExpress:Q9UIU6 Bgee:Q9UIU6
            CleanEx:HS_SIX4 Genevestigator:Q9UIU6 GermOnline:ENSG00000100625
            Uniprot:Q9UIU6
        Length = 781

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 122/221 (55%), Positives = 163/221 (73%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 165

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDGEE
Sbjct:   166 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 225

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRS 326
             TVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +  
Sbjct:   226 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQ 285

Query:   327 IQRSRNALKECYDKNRYPNPD-EKRQLSEIT-GLTLTQVSN 365
              +   +      D++   + D     LS  + G+T   +S+
Sbjct:   286 SKSESDGNPSTEDESSKGHEDLSPHPLSSSSDGITNLSLSS 326

 Score = 290 (107.1 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
 Identities = 51/98 (52%), Positives = 73/98 (74%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 165

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   166 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 203

 Score = 211 (79.3 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   232 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 283


>UNIPROTKB|E2QVI7 [details] [associations]
            symbol:SIX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090190 "positive regulation of branching
            involved in ureteric bud morphogenesis" evidence=IEA] [GO:0072107
            "positive regulation of ureteric bud formation" evidence=IEA]
            [GO:0072095 "regulation of branch elongation involved in ureteric
            bud branching" evidence=IEA] [GO:0072075 "metanephric mesenchyme
            development" evidence=IEA] [GO:0051451 "myoblast migration"
            evidence=IEA] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IEA] [GO:0048699 "generation of neurons"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=IEA] [GO:0042472
            "inner ear morphogenesis" evidence=IEA] [GO:0032880 "regulation of
            protein localization" evidence=IEA] [GO:0008582 "regulation of
            synaptic growth at neuromuscular junction" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0043524
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
            GO:GO:0048538 GO:GO:0090190 GO:GO:0048701 GO:GO:0072075
            GO:GO:0007519 GO:GO:0048699 GO:GO:0072107 GO:GO:0072095
            GO:GO:0051451 Ensembl:ENSCAFT00000024760 Uniprot:E2QVI7
        Length = 764

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 115/178 (64%), Positives = 147/178 (82%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:    89 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 148

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDGEE
Sbjct:   149 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 208

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             TVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   209 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 266

 Score = 290 (107.1 bits), Expect = 4.4e-44, Sum P(2) = 4.4e-44
 Identities = 51/98 (52%), Positives = 73/98 (74%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:    89 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 148

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   149 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 186

 Score = 211 (79.3 bits), Expect = 4.4e-44, Sum P(2) = 4.4e-44
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   215 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 266

 Score = 41 (19.5 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query:   107 SSDDSSPVLYETNAHDFNKHYLEIQQKAQEYLNMKKLNPNMSFTPEQIDCLCEAMQQ 163
             +S D   V+  T     N++   I Q      N + LN ++ F+P Q+  +  A  Q
Sbjct:   446 ASQDGGSVVTFTTPVQINQY--GIVQIPNSGTNSQFLNGSIGFSPLQLPSVSVAASQ 500


>UNIPROTKB|F6XRS2 [details] [associations]
            symbol:SIX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00540000070251
            CTD:51804 KO:K15615 OMA:NAQVNAN EMBL:AAEX03005766
            Ensembl:ENSCAFT00000024760 RefSeq:XP_547842.2 GeneID:490720
            KEGG:cfa:490720 Uniprot:F6XRS2
        Length = 785

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 115/178 (64%), Positives = 147/178 (82%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   110 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 169

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDGEE
Sbjct:   170 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 229

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             TVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   230 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 287

 Score = 290 (107.1 bits), Expect = 4.9e-44, Sum P(2) = 4.9e-44
 Identities = 51/98 (52%), Positives = 73/98 (74%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   110 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 169

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   170 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 207

 Score = 211 (79.3 bits), Expect = 4.9e-44, Sum P(2) = 4.9e-44
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   236 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 287

 Score = 41 (19.5 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query:   107 SSDDSSPVLYETNAHDFNKHYLEIQQKAQEYLNMKKLNPNMSFTPEQIDCLCEAMQQ 163
             +S D   V+  T     N++   I Q      N + LN ++ F+P Q+  +  A  Q
Sbjct:   467 ASQDGGSVVTFTTPVQINQY--GIVQIPNSGTNSQFLNGSIGFSPLQLPSVSVAASQ 521


>UNIPROTKB|J9NXQ2 [details] [associations]
            symbol:SIX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00540000070251
            EMBL:AAEX03005766 Ensembl:ENSCAFT00000047206 Uniprot:J9NXQ2
        Length = 775

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 115/178 (64%), Positives = 147/178 (82%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   100 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 159

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDGEE
Sbjct:   160 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 219

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             TVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   220 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 277

 Score = 290 (107.1 bits), Expect = 4.6e-44, Sum P(2) = 4.6e-44
 Identities = 51/98 (52%), Positives = 73/98 (74%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   100 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 159

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   160 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 197

 Score = 211 (79.3 bits), Expect = 4.6e-44, Sum P(2) = 4.6e-44
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   226 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 277

 Score = 41 (19.5 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query:   107 SSDDSSPVLYETNAHDFNKHYLEIQQKAQEYLNMKKLNPNMSFTPEQIDCLCEAMQQ 163
             +S D   V+  T     N++   I Q      N + LN ++ F+P Q+  +  A  Q
Sbjct:   457 ASQDGGSVVTFTTPVQINQY--GIVQIPNSGTNSQFLNGSIGFSPLQLPSVSVAASQ 511


>UNIPROTKB|J9P424 [details] [associations]
            symbol:SIX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00540000070251
            EMBL:AAEX03005766 Ensembl:ENSCAFT00000049537 Uniprot:J9P424
        Length = 644

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 115/178 (64%), Positives = 147/178 (82%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   102 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 161

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDGEE
Sbjct:   162 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 221

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             TVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   222 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 279

 Score = 290 (107.1 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
 Identities = 51/98 (52%), Positives = 73/98 (74%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   102 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 161

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   162 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 199

 Score = 211 (79.3 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   228 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 279


>UNIPROTKB|F1SRW3 [details] [associations]
            symbol:SIX4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090190 "positive
            regulation of branching involved in ureteric bud morphogenesis"
            evidence=IEA] [GO:0072107 "positive regulation of ureteric bud
            formation" evidence=IEA] [GO:0072095 "regulation of branch
            elongation involved in ureteric bud branching" evidence=IEA]
            [GO:0072075 "metanephric mesenchyme development" evidence=IEA]
            [GO:0051451 "myoblast migration" evidence=IEA] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IEA]
            [GO:0048699 "generation of neurons" evidence=IEA] [GO:0048538
            "thymus development" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0008582 "regulation of synaptic growth at neuromuscular
            junction" evidence=IEA] [GO:0007519 "skeletal muscle tissue
            development" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0043524
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
            GO:GO:0048538 GO:GO:0090190 GO:GO:0048701 GO:GO:0072075
            GO:GO:0007519 GO:GO:0048699 GO:GO:0072107
            GeneTree:ENSGT00540000070251 GO:GO:0072095 GO:GO:0051451 CTD:51804
            KO:K15615 OMA:NAQVNAN EMBL:CU855869 RefSeq:NP_001231543.1
            UniGene:Ssc.10128 Ensembl:ENSSSCT00000005609 GeneID:100153985
            KEGG:ssc:100153985 Uniprot:F1SRW3
        Length = 785

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 115/178 (64%), Positives = 147/178 (82%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   109 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 168

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LGAVDKYR+R+KFPLP+TIWDGEE
Sbjct:   169 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEE 228

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             TVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   229 TVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 286

 Score = 290 (107.1 bits), Expect = 4.9e-44, Sum P(2) = 4.9e-44
 Identities = 51/98 (52%), Positives = 73/98 (74%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             ++F+P+ + C+CEA+QQ G+ D+LA FLWSLP  + +RG ES+L+ARA+VA+ +  + EL
Sbjct:   109 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPEL 168

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y+ILESH+F+S  H  LQQLW +  Y E  + RGR LG
Sbjct:   169 YSILESHSFESANHPLLQQLWYKARYTEAERARGRPLG 206

 Score = 211 (79.3 bits), Expect = 4.9e-44, Sum P(2) = 4.9e-44
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   235 EKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSE 286


>ZFIN|ZDB-GENE-010201-1 [details] [associations]
            symbol:six4b "sine oculis homeobox homolog 4b"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-010201-1 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HOVERGEN:HBG098508
            EMBL:BC066428 EMBL:AB040709 IPI:IPI00491541 UniGene:Dr.80781
            STRING:Q9DEE7 InParanoid:Q9DEE7 Uniprot:Q9DEE7
        Length = 615

 Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
 Identities = 110/179 (61%), Positives = 144/179 (80%)

Query:   146 NMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHE 205
             +++F+PEQ+ C+CEA+ Q G+ D+LA FLWSLP  + +RG ES+L+A+A+VA+    + E
Sbjct:    62 SLAFSPEQVACVCEALMQGGNVDRLARFLWSLPQSDLLRGNESILKAQAIVAFHHARYQE 121

Query:   206 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGE 265
             LY ILE+H+F    H+ LQ +W +  Y E  K RGR LGAVDKYR+R+K+PLP+TIWDGE
Sbjct:   122 LYCILENHSFSPSNHSSLQDMWYKARYTEAEKARGRPLGAVDKYRLRRKYPLPRTIWDGE 181

Query:   266 ETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             ETVYCFKERSRNALK+ Y +NRYP+P EKR L+++TGL+LTQVSNWFKNRRQRDR P +
Sbjct:   182 ETVYCFKERSRNALKDMYKRNRYPSPAEKRNLAKMTGLSLTQVSNWFKNRRQRDRNPSE 240

 Score = 285 (105.4 bits), Expect = 8.0e-43, Sum P(2) = 8.0e-43
 Identities = 48/99 (48%), Positives = 70/99 (70%)

Query:     7 NMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHE 66
             +++F+PEQ+ C+CEA+ Q G+ D+LA FLWSLP  + +RG ES+L+A+A+VA+    + E
Sbjct:    62 SLAFSPEQVACVCEALMQGGNVDRLARFLWSLPQSDLLRGNESILKAQAIVAFHHARYQE 121

Query:    67 LYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             LY ILE+H+F    H+ LQ +W +  Y E  K RGR LG
Sbjct:   122 LYCILENHSFSPSNHSSLQDMWYKARYTEAEKARGRPLG 160

 Score = 209 (78.6 bits), Expect = 8.0e-43, Sum P(2) = 8.0e-43
 Identities = 37/52 (71%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             +RSRNALK+ Y +NRYP+P EKR L+++TGL+LTQVSNWFKNRRQRDR P +
Sbjct:   189 ERSRNALKDMYKRNRYPSPAEKRNLAKMTGLSLTQVSNWFKNRRQRDRNPSE 240


>UNIPROTKB|F1NQK9 [details] [associations]
            symbol:SIX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00540000070251 OMA:GNLSHAR
            EMBL:AADN02003900 EMBL:AADN02003901 EMBL:AADN02003902
            EMBL:AADN02003903 IPI:IPI00657621 Ensembl:ENSGALT00000037371
            Uniprot:F1NQK9
        Length = 283

 Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
 Identities = 113/185 (61%), Positives = 145/185 (78%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P + F+P+ + C+CE +QQ G+F      LWSLPP E +RG ES+++ARA+VA+ +  + 
Sbjct:     5 PPLFFSPDHVACVCEGLQQGGNFFPPPPVLWSLPP-ERLRGNESLMKARALVAFHQGIYA 63

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY+ILESHNFDS  H  LQ+LW +  Y E  + RG+ LGAVDKYR+R+K+PLP+TIWDG
Sbjct:    64 ELYSILESHNFDSSNHPLLQELWYKARYTEAERARGKPLGAVDKYRLRRKYPLPRTIWDG 123

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EETVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   124 EETVYCFKEKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSE 183

Query:   325 RSIQR 329
                +R
Sbjct:   184 TQSKR 188

 Score = 266 (98.7 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 49/100 (49%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P + F+P+ + C+CE +QQ G+F      LWSLPP E +RG ES+++ARA+VA+ +  + 
Sbjct:     5 PPLFFSPDHVACVCEGLQQGGNFFPPPPVLWSLPP-ERLRGNESLMKARALVAFHQGIYA 63

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY+ILESHNFDS  H  LQ+LW +  Y E  + RG+ LG
Sbjct:    64 ELYSILESHNFDSSNHPLLQELWYKARYTEAERARGKPLG 103

 Score = 214 (80.4 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 39/57 (68%), Positives = 47/57 (82%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +    R
Sbjct:   132 EKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKR 188


>UNIPROTKB|F1NQL0 [details] [associations]
            symbol:SIX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00540000070251 EMBL:AADN02003900
            EMBL:AADN02003901 EMBL:AADN02003902 EMBL:AADN02003903
            IPI:IPI00820469 Ensembl:ENSGALT00000037370 Uniprot:F1NQL0
        Length = 290

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 117/201 (58%), Positives = 151/201 (75%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P + F+P+ + C+CE +QQ G+F      LWSLP  E +RG ES+++ARA+VA+ +  + 
Sbjct:     4 PPLFFSPDHVACVCEGLQQGGNFFPPPPVLWSLPRGERLRGNESLMKARALVAFHQGIYA 63

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY+ILESHNFDS  H  LQ+LW +  Y E  + RG+ LGAVDKYR+R+K+PLP+TIWDG
Sbjct:    64 ELYSILESHNFDSSNHPLLQELWYKARYTEAERARGKPLGAVDKYRLRRKYPLPRTIWDG 123

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EETVYCFKE+SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:   124 EETVYCFKEKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSE 183

Query:   325 RSIQRSRNALKECYDKNRYPN 345
                 +SR +      K+R PN
Sbjct:   184 TQ-SKSRVSTGT---KHRGPN 200

 Score = 264 (98.0 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 48/100 (48%), Positives = 68/100 (68%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P + F+P+ + C+CE +QQ G+F      LWSLP  E +RG ES+++ARA+VA+ +  + 
Sbjct:     4 PPLFFSPDHVACVCEGLQQGGNFFPPPPVLWSLPRGERLRGNESLMKARALVAFHQGIYA 63

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY+ILESHNFDS  H  LQ+LW +  Y E  + RG+ LG
Sbjct:    64 ELYSILESHNFDSSNHPLLQELWYKARYTEAERARGKPLG 103

 Score = 215 (80.7 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 40/58 (68%), Positives = 51/58 (87%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ-RAKNR 384
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P + ++K+R
Sbjct:   132 EKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSR 189


>UNIPROTKB|F1S5K5 [details] [associations]
            symbol:SIX2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048701 "embryonic
            cranial skeleton morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045596 "negative regulation of cell
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
            evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007501
            "mesodermal cell fate specification" evidence=IEA] [GO:0006606
            "protein import into nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=IEA] [GO:0002062
            "chondrocyte differentiation" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008283
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0007501 GO:GO:0006606 GO:GO:0002062
            GO:GO:0048701 GO:GO:0003337 GO:GO:0042474 GO:GO:0045596
            GeneTree:ENSGT00540000070251 OMA:PLSASMN EMBL:FP067345
            Ensembl:ENSSSCT00000009248 Uniprot:F1S5K5
        Length = 299

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 113/189 (59%), Positives = 141/189 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     8 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 67

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct:    68 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 127

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   128 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 187

Query:   325 RSIQRSRNA 333
             +  + S N+
Sbjct:   188 KERENSENS 196

 Score = 297 (109.6 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 55/100 (55%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     8 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 67

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LG
Sbjct:    68 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 107

 Score = 183 (69.5 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   136 EKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 190


>MGI|MGI:102778 [details] [associations]
            symbol:Six2 "sine oculis-related homeobox 2" species:10090
            "Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
            [GO:0001822 "kidney development" evidence=ISO] [GO:0002062
            "chondrocyte differentiation" evidence=IMP] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006606 "protein import into nucleus"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007501 "mesodermal cell fate specification"
            evidence=IDA] [GO:0008283 "cell proliferation" evidence=IMP]
            [GO:0032403 "protein complex binding" evidence=IDA] [GO:0042474
            "middle ear morphogenesis" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045596 "negative
            regulation of cell differentiation" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IMP] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:102778 GO:GO:0005634 GO:GO:0032403
            GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007501 GO:GO:0006606
            GO:GO:0002062 GO:GO:0048701 GO:GO:0003337 GO:GO:0042474
            GO:GO:0045596 GeneTree:ENSGT00540000070251 eggNOG:NOG289502
            HOGENOM:HOG000261680 HOVERGEN:HBG003609 OrthoDB:EOG4RJG27 CTD:10736
            OMA:PLSASMN EMBL:X80338 EMBL:D83147 EMBL:BC068021 IPI:IPI00123346
            PIR:S74253 RefSeq:NP_035510.1 UniGene:Mm.5039
            ProteinModelPortal:Q62232 SMR:Q62232 IntAct:Q62232 STRING:Q62232
            PhosphoSite:Q62232 PRIDE:Q62232 Ensembl:ENSMUST00000024947
            Ensembl:ENSMUST00000163568 GeneID:20472 KEGG:mmu:20472
            InParanoid:Q62232 NextBio:298583 Bgee:Q62232 Genevestigator:Q62232
            GermOnline:ENSMUSG00000024134 Uniprot:Q62232
        Length = 296

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 113/189 (59%), Positives = 141/189 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRNA 333
             +  + S N+
Sbjct:   185 KERENSENS 193

 Score = 297 (109.6 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 55/100 (55%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 104

 Score = 183 (69.5 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>RGD|1310792 [details] [associations]
            symbol:Six2 "SIX homeobox 2" species:10116 "Rattus norvegicus"
            [GO:0001656 "metanephros development" evidence=ISO] [GO:0001822
            "kidney development" evidence=ISO] [GO:0002062 "chondrocyte
            differentiation" evidence=ISO] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006606 "protein import
            into nucleus" evidence=ISO] [GO:0007501 "mesodermal cell fate
            specification" evidence=ISO] [GO:0008283 "cell proliferation"
            evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
            [GO:0042474 "middle ear morphogenesis" evidence=ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045596
            "negative regulation of cell differentiation" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0048701 "embryonic
            cranial skeleton morphogenesis" evidence=ISO] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            RGD:1310792 GO:GO:0005634 GO:GO:0008283 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007501
            GO:GO:0006606 GO:GO:0002062 GO:GO:0048701 GO:GO:0003337
            GO:GO:0042474 GO:GO:0045596 GeneTree:ENSGT00540000070251
            OrthoDB:EOG4RJG27 CTD:10736 OMA:PLSASMN IPI:IPI00369347
            RefSeq:NP_001178837.1 UniGene:Rn.225521 ProteinModelPortal:D3ZM80
            SMR:D3ZM80 Ensembl:ENSRNOT00000035406 GeneID:366542 KEGG:rno:366542
            UCSC:RGD:1310792 NextBio:689617 Uniprot:D3ZM80
        Length = 296

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 113/189 (59%), Positives = 141/189 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRNA 333
             +  + S N+
Sbjct:   185 KERENSENS 193

 Score = 297 (109.6 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 55/100 (55%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 104

 Score = 183 (69.5 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>ZFIN|ZDB-GENE-010201-3 [details] [associations]
            symbol:six4.3 "sine oculis homeobox homolog 4.3"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-010201-3 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00540000070251 EMBL:BX511193 EMBL:AL954841
            IPI:IPI00833197 PRIDE:F1QE40 Ensembl:ENSDART00000098922
            ArrayExpress:F1QE40 Bgee:F1QE40 Uniprot:F1QE40
        Length = 954

 Score = 627 (225.8 bits), Expect = 8.3e-61, P = 8.3e-61
 Identities = 116/191 (60%), Positives = 148/191 (77%)

Query:   133 KAQEYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ-EAIRGQESVLR 191
             +  E L     N  +SF+ +Q+ CLCEA+ Q+G+ D+L  FL ++PP  + +RG E++L+
Sbjct:    34 EVSEQLLQSFQNSALSFSTDQVACLCEALLQAGNVDRLWRFLATIPPSADLLRGNETLLK 93

Query:   192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
             A+A+VA+ R  F ELYAIL+SH+F    H  LQ L+++  YKE  + RGR LGAVDKYR+
Sbjct:    94 AQALVAFHRDEFKELYAILDSHDFHPSNHGFLQDLYLKARYKEAERSRGRSLGAVDKYRL 153

Query:   252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
             RKKFPLPKTIWDGEETVYCFKE+SRNALKECY  NRYP P EK+ L+++TGL+LTQVSNW
Sbjct:   154 RKKFPLPKTIWDGEETVYCFKEKSRNALKECYKINRYPTPAEKKNLAKVTGLSLTQVSNW 213

Query:   312 FKNRRQRDRTP 322
             FKNRRQRDRTP
Sbjct:   214 FKNRRQRDRTP 224

 Score = 253 (94.1 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
 Identities = 48/102 (47%), Positives = 72/102 (70%)

Query:     5 NPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ-EAIRGQESVLRARAVVAYKRHA 63
             N  +SF+ +Q+ CLCEA+ Q+G+ D+L  FL ++PP  + +RG E++L+A+A+VA+ R  
Sbjct:    45 NSALSFSTDQVACLCEALLQAGNVDRLWRFLATIPPSADLLRGNETLLKAQALVAFHRDE 104

Query:    64 FHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             F ELYAIL+SH+F    H  LQ L+++  YKE  + RGR LG
Sbjct:   105 FKELYAILDSHDFHPSNHGFLQDLYLKARYKEAERSRGRSLG 146

 Score = 215 (80.7 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
 Identities = 38/50 (76%), Positives = 45/50 (90%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 377
             ++SRNALKECY  NRYP P EK+ L+++TGL+LTQVSNWFKNRRQRDRTP
Sbjct:   175 EKSRNALKECYKINRYPTPAEKKNLAKVTGLSLTQVSNWFKNRRQRDRTP 224


>UNIPROTKB|Q9NPC8 [details] [associations]
            symbol:SIX2 "Homeobox protein SIX2" species:9606 "Homo
            sapiens" [GO:0002062 "chondrocyte differentiation" evidence=IEA]
            [GO:0003337 "mesenchymal to epithelial transition involved in
            metanephros morphogenesis" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006606 "protein import into nucleus"
            evidence=IEA] [GO:0007501 "mesodermal cell fate specification"
            evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
            [GO:0032403 "protein complex binding" evidence=IEA] [GO:0042474
            "middle ear morphogenesis" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045596 "negative
            regulation of cell differentiation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001822 "kidney development" evidence=IMP] [GO:0009653
            "anatomical structure morphogenesis" evidence=TAS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0008283 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007501
            GO:GO:0006606 GO:GO:0001822 GO:GO:0009653 GO:GO:0002062
            GO:GO:0048701 GO:GO:0003337 GO:GO:0042474 GO:GO:0045596
            eggNOG:NOG289502 HOGENOM:HOG000261680 HOVERGEN:HBG003609
            OrthoDB:EOG4RJG27 EMBL:AF136939 EMBL:AF136940 EMBL:AF332196
            EMBL:AF332197 EMBL:AF332198 EMBL:AF323498 EMBL:BT020100
            IPI:IPI00299333 RefSeq:NP_058628.3 UniGene:Hs.101937
            ProteinModelPortal:Q9NPC8 SMR:Q9NPC8 STRING:Q9NPC8 DMDM:12230598
            PRIDE:Q9NPC8 DNASU:10736 Ensembl:ENST00000303077 GeneID:10736
            KEGG:hsa:10736 UCSC:uc002ruo.3 CTD:10736 GeneCards:GC02M045232
            HGNC:HGNC:10888 HPA:HPA052782 MIM:604994 neXtProt:NX_Q9NPC8
            PharmGKB:PA35788 InParanoid:Q9NPC8 OMA:PLSASMN PhylomeDB:Q9NPC8
            GenomeRNAi:10736 NextBio:40762 Bgee:Q9NPC8 CleanEx:HS_SIX2
            Genevestigator:Q9NPC8 GermOnline:ENSG00000170577 Uniprot:Q9NPC8
        Length = 291

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 112/189 (59%), Positives = 141/189 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRNA 333
             +  + + N+
Sbjct:   185 KERENNENS 193

 Score = 297 (109.6 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 55/100 (55%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 104

 Score = 183 (69.5 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>ZFIN|ZDB-GENE-040426-2308 [details] [associations]
            symbol:six1b "sine oculis homeobox homolog 1b"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IGI] [GO:0051146 "striated muscle cell differentiation"
            evidence=IMP] [GO:0048839 "inner ear development" evidence=IMP]
            [GO:0048935 "peripheral nervous system neuron development"
            evidence=IMP] [GO:0002074 "extraocular skeletal muscle development"
            evidence=IMP] [GO:0043282 "pharyngeal muscle development"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-040426-2308 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051146
            GO:GO:0048839 GO:GO:0021984 GO:GO:0002074 GO:GO:0048935
            GO:GO:0043282 GeneTree:ENSGT00540000070251 HOVERGEN:HBG003609
            KO:K15614 EMBL:BX649231 EMBL:BC066396 EMBL:AY466110 IPI:IPI00512063
            RefSeq:NP_996978.1 UniGene:Dr.27681 STRING:Q6NZ04
            Ensembl:ENSDART00000036124 GeneID:404627 KEGG:dre:404627 CTD:404627
            InParanoid:Q6NZ04 OMA:RENSENN NextBio:20817691 Uniprot:Q6NZ04
        Length = 284

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 112/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + S N
Sbjct:   185 KERENSEN 192

 Score = 290 (107.1 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLG 104

 Score = 183 (69.5 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 36/57 (63%), Positives = 43/57 (75%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>UNIPROTKB|E1BJ27 [details] [associations]
            symbol:SIX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048701 "embryonic
            cranial skeleton morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045596 "negative regulation of cell
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
            evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007501
            "mesodermal cell fate specification" evidence=IEA] [GO:0006606
            "protein import into nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003337 "mesenchymal to epithelial transition
            involved in metanephros morphogenesis" evidence=IEA] [GO:0002062
            "chondrocyte differentiation" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008283
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0007501 GO:GO:0006606 GO:GO:0002062
            GO:GO:0048701 GO:GO:0003337 GO:GO:0042474 GO:GO:0045596
            GeneTree:ENSGT00540000070251 OMA:PLSASMN EMBL:DAAA02030700
            IPI:IPI00697744 Ensembl:ENSBTAT00000005445 Uniprot:E1BJ27
        Length = 298

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 114/191 (59%), Positives = 142/191 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQ- 323
             EET YCFKE+SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   324 -QRSIQRSRNA 333
              +R  + S N+
Sbjct:   185 KERYEENSENS 195

 Score = 297 (109.6 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 55/100 (55%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 104

 Score = 183 (69.5 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>UNIPROTKB|E2R181 [details] [associations]
            symbol:SIX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045596 "negative
            regulation of cell differentiation" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042474 "middle
            ear morphogenesis" evidence=IEA] [GO:0032403 "protein complex
            binding" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0007501 "mesodermal cell fate specification"
            evidence=IEA] [GO:0006606 "protein import into nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003337
            "mesenchymal to epithelial transition involved in metanephros
            morphogenesis" evidence=IEA] [GO:0002062 "chondrocyte
            differentiation" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008283
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0007501 GO:GO:0006606 GO:GO:0002062
            GO:GO:0048701 GO:GO:0003337 GO:GO:0042474 GO:GO:0045596
            GeneTree:ENSGT00540000070251 OMA:PLSASMN EMBL:AAEX03007482
            Ensembl:ENSCAFT00000004022 Uniprot:E2R181
        Length = 298

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 114/191 (59%), Positives = 142/191 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQ- 323
             EET YCFKE+SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   324 -QRSIQRSRNA 333
              +R  + S N+
Sbjct:   185 KERYEENSENS 195

 Score = 297 (109.6 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 55/100 (55%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    HA+LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLG 104

 Score = 183 (69.5 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>UNIPROTKB|Q08DI4 [details] [associations]
            symbol:SIX1 "SIX1 protein" species:9913 "Bos taurus"
            [GO:0042472 "inner ear morphogenesis" evidence=ISS] [GO:0005667
            "transcription factor complex" evidence=ISS] [GO:0007519 "skeletal
            muscle tissue development" evidence=ISS] [GO:0030855 "epithelial
            cell differentiation" evidence=ISS] [GO:0030878 "thyroid gland
            development" evidence=ISS] [GO:0045664 "regulation of neuron
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0048538 "thymus development" evidence=ISS] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=ISS]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISS]
            [GO:0051451 "myoblast migration" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=ISS] [GO:0072172 "mesonephric tubule
            formation" evidence=ISS] [GO:0072107 "positive regulation of
            ureteric bud formation" evidence=ISS] [GO:0072095 "regulation of
            branch elongation involved in ureteric bud branching" evidence=ISS]
            [GO:0072075 "metanephric mesenchyme development" evidence=ISS]
            [GO:0048839 "inner ear development" evidence=ISS] [GO:0048699
            "generation of neurons" evidence=ISS] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0001822 "kidney development" evidence=ISS] [GO:0001657
            "ureteric bud development" evidence=ISS] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001759
            "organ induction" evidence=ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0007389 "pattern
            specification process" evidence=ISS] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0045664 GO:GO:0043565
            GO:GO:0045944 GO:GO:0043524 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0042472
            GO:GO:0048538 GO:GO:0090190 GO:GO:0007389 GO:GO:0001658
            GO:GO:0048701 GO:GO:0030855 GO:GO:0072075 GO:GO:0001759
            GO:GO:0007519 GO:GO:0030878 GO:GO:0072107
            GeneTree:ENSGT00540000070251 eggNOG:NOG289502 HOGENOM:HOG000261680
            GO:GO:0072095 GO:GO:0072172 HOVERGEN:HBG003609 OMA:GNLSHAR
            OrthoDB:EOG4RJG27 GO:GO:0051451 EMBL:DAAA02029309 EMBL:BC123733
            IPI:IPI00688658 UniGene:Bt.47753 STRING:Q08DI4
            Ensembl:ENSBTAT00000016104 InParanoid:Q08DI4 Uniprot:Q08DI4
        Length = 357

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:    78 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 137

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:   138 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 197

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   198 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 257

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   258 KERENTEN 265

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:    78 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 137

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:   138 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 177

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   206 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 263


>UNIPROTKB|J9P3S7 [details] [associations]
            symbol:SIX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00540000070251
            OMA:GNLSHAR CTD:6495 KO:K15614 EMBL:AAEX03005765 RefSeq:XP_547841.3
            ProteinModelPortal:J9P3S7 Ensembl:ENSCAFT00000048160 GeneID:490719
            KEGG:cfa:490719 Uniprot:J9P3S7
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>UNIPROTKB|Q15475 [details] [associations]
            symbol:SIX1 "Homeobox protein SIX1" species:9606 "Homo
            sapiens" [GO:0060037 "pharyngeal system development" evidence=IEA]
            [GO:0071599 "otic vesicle development" evidence=IEA] [GO:0072193
            "ureter smooth muscle cell differentiation" evidence=IEA]
            [GO:0072513 "positive regulation of secondary heart field
            cardioblast proliferation" evidence=IEA] [GO:0090103 "cochlea
            morphogenesis" evidence=IEA] [GO:0090191 "negative regulation of
            branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:2000729 "positive regulation of mesenchymal cell proliferation
            involved in ureter development" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0008582
            "regulation of synaptic growth at neuromuscular junction"
            evidence=IEA] [GO:0021610 "facial nerve morphogenesis"
            evidence=IEA] [GO:0032880 "regulation of protein localization"
            evidence=IEA] [GO:0035909 "aorta morphogenesis" evidence=IEA]
            [GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0034504 "protein localization to
            nucleus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IDA] [GO:0048839 "inner ear
            development" evidence=ISS] [GO:0048699 "generation of neurons"
            evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=ISS] [GO:0001759 "organ induction" evidence=ISS]
            [GO:0007389 "pattern specification process" evidence=ISS]
            [GO:0007519 "skeletal muscle tissue development" evidence=ISS]
            [GO:0030855 "epithelial cell differentiation" evidence=ISS]
            [GO:0030878 "thyroid gland development" evidence=ISS] [GO:0042472
            "inner ear morphogenesis" evidence=ISS] [GO:0048538 "thymus
            development" evidence=ISS] [GO:0051451 "myoblast migration"
            evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=ISS] [GO:0072075 "metanephric mesenchyme
            development" evidence=ISS] [GO:0072095 "regulation of branch
            elongation involved in ureteric bud branching" evidence=ISS]
            [GO:0072107 "positive regulation of ureteric bud formation"
            evidence=ISS] [GO:0072172 "mesonephric tubule formation"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=ISS] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=ISS] [GO:0045664 "regulation of neuron
            differentiation" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0006351
            "transcription, DNA-dependent" evidence=ISS] [GO:0090190 "positive
            regulation of branching involved in ureteric bud morphogenesis"
            evidence=ISS] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0045664 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
            GO:GO:0043524 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
            GO:GO:0044212 GO:GO:0042472 GO:GO:0007605 Orphanet:90635
            GO:GO:0060037 GO:GO:0048538 GO:GO:0090190 GO:GO:0071599
            GO:GO:0007389 GO:GO:0001658 GO:GO:0048701 GO:GO:0003151
            GO:GO:0035909 GO:GO:0034504 GO:GO:0030855 GO:GO:0072075
            GO:GO:0090191 GO:GO:0072193 GO:GO:0001759 GO:GO:0007519
            GO:GO:0090103 GO:GO:0030878 GO:GO:0042474 GO:GO:0072513
            Orphanet:107 Orphanet:52429 GO:GO:0072107 eggNOG:NOG289502
            HOGENOM:HOG000261680 GO:GO:0072095 GO:GO:0072172 GO:GO:0021610
            GO:GO:2000729 HOVERGEN:HBG003609 OMA:GNLSHAR OrthoDB:EOG4RJG27
            GO:GO:0051451 EMBL:X91868 EMBL:AF323497 EMBL:BT007083 EMBL:BC008874
            IPI:IPI00017506 RefSeq:NP_005973.1 UniGene:Hs.633506
            ProteinModelPortal:Q15475 SMR:Q15475 IntAct:Q15475 MINT:MINT-140054
            STRING:Q15475 PhosphoSite:Q15475 DMDM:2495290 PRIDE:Q15475
            DNASU:6495 Ensembl:ENST00000247182 GeneID:6495 KEGG:hsa:6495
            UCSC:uc001xfb.4 CTD:6495 GeneCards:GC14M061111 HGNC:HGNC:10887
            HPA:HPA001893 MIM:601205 MIM:605192 MIM:608389 neXtProt:NX_Q15475
            PharmGKB:PA35787 InParanoid:Q15475 KO:K15614 PhylomeDB:Q15475
            GenomeRNAi:6495 NextBio:25247 ArrayExpress:Q15475 Bgee:Q15475
            CleanEx:HS_SIX1 Genevestigator:Q15475 GermOnline:ENSG00000126778
            Uniprot:Q15475
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>UNIPROTKB|E5DCJ4 [details] [associations]
            symbol:Six1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0030855 "epithelial cell differentiation" evidence=ISS]
            [GO:0045664 "regulation of neuron differentiation" evidence=ISS]
            [GO:0007389 "pattern specification process" evidence=ISS]
            [GO:0007519 "skeletal muscle tissue development" evidence=ISS]
            [GO:0030878 "thyroid gland development" evidence=ISS] [GO:0042472
            "inner ear morphogenesis" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0048538 "thymus development" evidence=ISS]
            [GO:0048701 "embryonic cranial skeleton morphogenesis"
            evidence=ISS] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=ISS] [GO:0051451 "myoblast migration" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=ISS] [GO:0072172 "mesonephric tubule
            formation" evidence=ISS] [GO:0072107 "positive regulation of
            ureteric bud formation" evidence=ISS] [GO:0072095 "regulation of
            branch elongation involved in ureteric bud branching" evidence=ISS]
            [GO:0072075 "metanephric mesenchyme development" evidence=ISS]
            [GO:0048839 "inner ear development" evidence=ISS] [GO:0048699
            "generation of neurons" evidence=ISS] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0001822 "kidney development" evidence=ISS] [GO:0001657
            "ureteric bud development" evidence=ISS] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001759
            "organ induction" evidence=ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:2000729 "positive
            regulation of mesenchymal cell proliferation involved in ureter
            development" evidence=IEA] [GO:0090191 "negative regulation of
            branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:0090103 "cochlea morphogenesis" evidence=IEA] [GO:0072513
            "positive regulation of secondary heart field cardioblast
            proliferation" evidence=IEA] [GO:0072193 "ureter smooth muscle cell
            differentiation" evidence=IEA] [GO:0071599 "otic vesicle
            development" evidence=IEA] [GO:0060037 "pharyngeal system
            development" evidence=IEA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IEA] [GO:0042474 "middle ear
            morphogenesis" evidence=IEA] [GO:0035909 "aorta morphogenesis"
            evidence=IEA] [GO:0034504 "protein localization to nucleus"
            evidence=IEA] [GO:0032880 "regulation of protein localization"
            evidence=IEA] [GO:0021610 "facial nerve morphogenesis"
            evidence=IEA] [GO:0008582 "regulation of synaptic growth at
            neuromuscular junction" evidence=IEA] [GO:0007605 "sensory
            perception of sound" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0045664 GO:GO:0005730 GO:GO:0043565
            GO:GO:0045944 GO:GO:0043524 GO:GO:0003700 GO:GO:0006351
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0000122 GO:GO:0044212 GO:GO:0042472 GO:GO:0007605
            GO:GO:0060037 GO:GO:0048538 GO:GO:0090190 GO:GO:0071599
            GO:GO:0007389 GO:GO:0001658 GO:GO:0048701 GO:GO:0003151
            GO:GO:0035909 GO:GO:0034504 GO:GO:0030855 GO:GO:0072075
            GO:GO:0090191 GO:GO:0072193 GO:GO:0001759 GO:GO:0007519
            GO:GO:0090103 GO:GO:0030878 GO:GO:0042474 GO:GO:0072513
            GO:GO:0072107 GeneTree:ENSGT00540000070251 GO:GO:0072095
            GO:GO:0072172 GO:GO:0021610 GO:GO:2000729 OMA:GNLSHAR GO:GO:0051451
            CTD:6495 KO:K15614 EMBL:CU462967 EMBL:GU225952 EMBL:GU225953
            RefSeq:NP_001186647.1 UniGene:Ssc.15233 Ensembl:ENSSSCT00000005607
            GeneID:100156847 KEGG:ssc:100156847 Uniprot:E5DCJ4
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>UNIPROTKB|A1YER0 [details] [associations]
            symbol:SIX1 "Homeobox protein SIX1" species:9595 "Gorilla
            gorilla gorilla" [GO:0001657 "ureteric bud development"
            evidence=ISS] [GO:0001658 "branching involved in ureteric bud
            morphogenesis" evidence=ISS] [GO:0001759 "organ induction"
            evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0006351 "transcription, DNA-dependent" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0007389 "pattern specification process"
            evidence=ISS] [GO:0007519 "skeletal muscle tissue development"
            evidence=ISS] [GO:0030855 "epithelial cell differentiation"
            evidence=ISS] [GO:0030878 "thyroid gland development" evidence=ISS]
            [GO:0042472 "inner ear morphogenesis" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045664 "regulation of neuron differentiation" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048538 "thymus
            development" evidence=ISS] [GO:0048699 "generation of neurons"
            evidence=ISS] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=ISS] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=ISS] [GO:0048839 "inner ear development"
            evidence=ISS] [GO:0051451 "myoblast migration" evidence=ISS]
            [GO:0072075 "metanephric mesenchyme development" evidence=ISS]
            [GO:0072095 "regulation of branch elongation involved in ureteric
            bud branching" evidence=ISS] [GO:0072107 "positive regulation of
            ureteric bud formation" evidence=ISS] [GO:0072172 "mesonephric
            tubule formation" evidence=ISS] [GO:0090190 "positive regulation of
            branching involved in ureteric bud morphogenesis" evidence=ISS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0045664 GO:GO:0043565 GO:GO:0045944 GO:GO:0043524
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0005667 GO:GO:0042472 GO:GO:0048538 GO:GO:0090190
            GO:GO:0007389 GO:GO:0001658 GO:GO:0048701 GO:GO:0030855
            GO:GO:0072075 GO:GO:0001759 GO:GO:0007519 GO:GO:0030878
            GO:GO:0072107 GO:GO:0072095 GO:GO:0072172 EMBL:DQ976442
            RefSeq:XP_004055308.1 ProteinModelPortal:A1YER0 SMR:A1YER0
            PRIDE:A1YER0 GeneID:101128790 HOVERGEN:HBG003609 OMA:GNLSHAR
            OrthoDB:EOG4RJG27 GO:GO:0051451 Uniprot:A1YER0
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>UNIPROTKB|A2D5H2 [details] [associations]
            symbol:SIX1 "Homeobox protein SIX1" species:9519 "Lagothrix
            lagotricha" [GO:0001657 "ureteric bud development" evidence=ISS]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=ISS] [GO:0001759 "organ induction" evidence=ISS]
            [GO:0001822 "kidney development" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005667
            "transcription factor complex" evidence=ISS] [GO:0006351
            "transcription, DNA-dependent" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0007389 "pattern specification process" evidence=ISS]
            [GO:0007519 "skeletal muscle tissue development" evidence=ISS]
            [GO:0030855 "epithelial cell differentiation" evidence=ISS]
            [GO:0030878 "thyroid gland development" evidence=ISS] [GO:0042472
            "inner ear morphogenesis" evidence=ISS] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045664
            "regulation of neuron differentiation" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0048538 "thymus
            development" evidence=ISS] [GO:0048699 "generation of neurons"
            evidence=ISS] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=ISS] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=ISS] [GO:0048839 "inner ear development"
            evidence=ISS] [GO:0051451 "myoblast migration" evidence=ISS]
            [GO:0072075 "metanephric mesenchyme development" evidence=ISS]
            [GO:0072095 "regulation of branch elongation involved in ureteric
            bud branching" evidence=ISS] [GO:0072107 "positive regulation of
            ureteric bud formation" evidence=ISS] [GO:0072172 "mesonephric
            tubule formation" evidence=ISS] [GO:0090190 "positive regulation of
            branching involved in ureteric bud morphogenesis" evidence=ISS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0045664 GO:GO:0043565 GO:GO:0045944 GO:GO:0043524
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0005667 GO:GO:0042472 GO:GO:0048538 GO:GO:0090190
            GO:GO:0007389 GO:GO:0001658 GO:GO:0048701 GO:GO:0030855
            GO:GO:0072075 GO:GO:0001759 GO:GO:0007519 GO:GO:0030878
            GO:GO:0072107 GO:GO:0072095 GO:GO:0072172 HOVERGEN:HBG003609
            OrthoDB:EOG4RJG27 GO:GO:0051451 EMBL:DQ976721
            ProteinModelPortal:A2D5H2 Uniprot:A2D5H2
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>UNIPROTKB|D2GVS4 [details] [associations]
            symbol:SIX1 "Uncharacterized protein" species:9646
            "Ailuropoda melanoleuca" [GO:0001657 "ureteric bud development"
            evidence=ISS] [GO:0001658 "branching involved in ureteric bud
            morphogenesis" evidence=ISS] [GO:0001759 "organ induction"
            evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0006351 "transcription, DNA-dependent" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0007389 "pattern specification process"
            evidence=ISS] [GO:0007519 "skeletal muscle tissue development"
            evidence=ISS] [GO:0030855 "epithelial cell differentiation"
            evidence=ISS] [GO:0030878 "thyroid gland development" evidence=ISS]
            [GO:0042472 "inner ear morphogenesis" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045664 "regulation of neuron differentiation" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048538 "thymus
            development" evidence=ISS] [GO:0048699 "generation of neurons"
            evidence=ISS] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=ISS] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=ISS] [GO:0048839 "inner ear development"
            evidence=ISS] [GO:0051451 "myoblast migration" evidence=ISS]
            [GO:0072075 "metanephric mesenchyme development" evidence=ISS]
            [GO:0072095 "regulation of branch elongation involved in ureteric
            bud branching" evidence=ISS] [GO:0072107 "positive regulation of
            ureteric bud formation" evidence=ISS] [GO:0072172 "mesonephric
            tubule formation" evidence=ISS] [GO:0090190 "positive regulation of
            branching involved in ureteric bud morphogenesis" evidence=ISS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0045664 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
            GO:GO:0043524 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
            GO:GO:0044212 GO:GO:0042472 GO:GO:0007605 GO:GO:0060037
            GO:GO:0048538 GO:GO:0090190 GO:GO:0071599 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048701 GO:GO:0003151 GO:GO:0035909
            GO:GO:0034504 GO:GO:0030855 GO:GO:0072075 GO:GO:0090191
            GO:GO:0072193 GO:GO:0001759 GO:GO:0007519 GO:GO:0090103
            GO:GO:0030878 GO:GO:0042474 GO:GO:0072513 GO:GO:0072107
            GeneTree:ENSGT00540000070251 HOGENOM:HOG000261680 GO:GO:0072095
            GO:GO:0072172 GO:GO:0021610 GO:GO:2000729 OMA:GNLSHAR GO:GO:0051451
            CTD:6495 KO:K15614 EMBL:GL192352 EMBL:ACTA01041236
            RefSeq:XP_002913075.1 Ensembl:ENSAMET00000003239 GeneID:100473503
            KEGG:aml:100473503 Uniprot:D2GVS4
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>UNIPROTKB|D3U1G0 [details] [associations]
            symbol:D3U1G0 "Six1" species:9940 "Ovis aries" [GO:0001657
            "ureteric bud development" evidence=ISS] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001759
            "organ induction" evidence=ISS] [GO:0001822 "kidney development"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007389 "pattern specification
            process" evidence=ISS] [GO:0007519 "skeletal muscle tissue
            development" evidence=ISS] [GO:0030855 "epithelial cell
            differentiation" evidence=ISS] [GO:0030878 "thyroid gland
            development" evidence=ISS] [GO:0042472 "inner ear morphogenesis"
            evidence=ISS] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045664 "regulation of neuron differentiation"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0048538 "thymus development" evidence=ISS] [GO:0048699
            "generation of neurons" evidence=ISS] [GO:0048701 "embryonic
            cranial skeleton morphogenesis" evidence=ISS] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=ISS] [GO:0048839
            "inner ear development" evidence=ISS] [GO:0051451 "myoblast
            migration" evidence=ISS] [GO:0072075 "metanephric mesenchyme
            development" evidence=ISS] [GO:0072095 "regulation of branch
            elongation involved in ureteric bud branching" evidence=ISS]
            [GO:0072107 "positive regulation of ureteric bud formation"
            evidence=ISS] [GO:0072172 "mesonephric tubule formation"
            evidence=ISS] [GO:0090190 "positive regulation of branching
            involved in ureteric bud morphogenesis" evidence=ISS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0045664 GO:GO:0043565 GO:GO:0045944 GO:GO:0043524
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0005667 GO:GO:0042472 GO:GO:0048538 GO:GO:0090190
            GO:GO:0007389 GO:GO:0001658 GO:GO:0048701 GO:GO:0030855
            GO:GO:0072075 GO:GO:0001759 GO:GO:0007519 GO:GO:0030878
            GO:GO:0072107 GO:GO:0072095 GO:GO:0072172 GO:GO:0051451 CTD:6495
            EMBL:FJ715738 RefSeq:NP_001167584.1 UniGene:Oar.22828
            GeneID:100381248 Uniprot:D3U1G0
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>MGI|MGI:102780 [details] [associations]
            symbol:Six1 "sine oculis-related homeobox 1" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0001657
            "ureteric bud development" evidence=IGI;IMP] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IGI] [GO:0001759
            "organ induction" evidence=IMP] [GO:0001822 "kidney development"
            evidence=IMP] [GO:0003151 "outflow tract morphogenesis"
            evidence=IGI] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=IGI] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=IDA;IPI] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IGI;IMP] [GO:0007519 "skeletal muscle tissue
            development" evidence=IGI] [GO:0007605 "sensory perception of
            sound" evidence=IMP] [GO:0008582 "regulation of synaptic growth at
            neuromuscular junction" evidence=IGI] [GO:0010468 "regulation of
            gene expression" evidence=IGI] [GO:0021610 "facial nerve
            morphogenesis" evidence=IMP] [GO:0030855 "epithelial cell
            differentiation" evidence=IMP] [GO:0030878 "thyroid gland
            development" evidence=IMP] [GO:0032880 "regulation of protein
            localization" evidence=IGI] [GO:0034504 "protein localization to
            nucleus" evidence=ISO] [GO:0035909 "aorta morphogenesis"
            evidence=IGI] [GO:0042472 "inner ear morphogenesis" evidence=IGI]
            [GO:0042474 "middle ear morphogenesis" evidence=IMP] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISO] [GO:0045664 "regulation of neuron differentiation"
            evidence=IGI;IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI;ISO;IDA] [GO:0048538 "thymus development"
            evidence=IGI;IMP] [GO:0048665 "neuron fate specification"
            evidence=IGI] [GO:0048699 "generation of neurons" evidence=IMP]
            [GO:0048701 "embryonic cranial skeleton morphogenesis"
            evidence=IGI] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI] [GO:0048705 "skeletal system morphogenesis"
            evidence=IMP] [GO:0048839 "inner ear development" evidence=IMP]
            [GO:0048856 "anatomical structure development" evidence=IGI]
            [GO:0051451 "myoblast migration" evidence=IGI] [GO:0060037
            "pharyngeal system development" evidence=IGI] [GO:0071599 "otic
            vesicle development" evidence=IGI;IMP] [GO:0072001 "renal system
            development" evidence=IGI] [GO:0072075 "metanephric mesenchyme
            development" evidence=IMP] [GO:0072095 "regulation of branch
            elongation involved in ureteric bud branching" evidence=IMP]
            [GO:0072107 "positive regulation of ureteric bud formation"
            evidence=IMP] [GO:0072172 "mesonephric tubule formation"
            evidence=IMP] [GO:0072193 "ureter smooth muscle cell
            differentiation" evidence=IMP] [GO:0072513 "positive regulation of
            secondary heart field cardioblast proliferation" evidence=IGI]
            [GO:0090103 "cochlea morphogenesis" evidence=IMP] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=IMP] [GO:0090191 "negative regulation of
            branching involved in ureteric bud morphogenesis" evidence=IMP]
            [GO:2000729 "positive regulation of mesenchymal cell proliferation
            involved in ureter development" evidence=IGI] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:102780 GO:GO:0045664
            GO:GO:0005730 GO:GO:0043565 GO:GO:0045944 GO:GO:0043524
            GO:GO:0003700 GO:GO:0032880 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
            GO:GO:0044212 GO:GO:0007605 GO:GO:0060037 GO:GO:0048538
            GO:GO:0090190 GO:GO:0071599 GO:GO:0007389 GO:GO:0001658
            GO:GO:0048701 GO:GO:0003151 GO:GO:0035909 GO:GO:0008582
            GO:GO:0034504 GO:GO:0030855 GO:GO:0072075 GO:GO:0090191
            GO:GO:0072193 GO:GO:0001759 GO:GO:0007519 GO:GO:0090103
            GO:GO:0030878 GO:GO:0042474 GO:GO:0072513 GO:GO:0072107
            GeneTree:ENSGT00540000070251 eggNOG:NOG289502 HOGENOM:HOG000261680
            GO:GO:0072095 GO:GO:0072172 GO:GO:0021610 GO:GO:2000729
            HOVERGEN:HBG003609 OMA:GNLSHAR OrthoDB:EOG4RJG27 GO:GO:0051451
            CTD:6495 KO:K15614 EMBL:X80339 EMBL:BC023304 IPI:IPI00229876
            PIR:S60751 RefSeq:NP_033215.2 UniGene:Mm.4645
            ProteinModelPortal:Q62231 SMR:Q62231 IntAct:Q62231 STRING:Q62231
            PhosphoSite:Q62231 PRIDE:Q62231 Ensembl:ENSMUST00000050029
            GeneID:20471 KEGG:mmu:20471 InParanoid:Q62231 NextBio:298579
            Bgee:Q62231 Genevestigator:Q62231 GermOnline:ENSMUSG00000051367
            Uniprot:Q62231
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>UNIPROTKB|G3V970 [details] [associations]
            symbol:Six1 "Protein Six1" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IEA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
            "organ induction" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IEA] [GO:0007519 "skeletal muscle tissue
            development" evidence=IEA] [GO:0007605 "sensory perception of
            sound" evidence=IEA] [GO:0008582 "regulation of synaptic growth at
            neuromuscular junction" evidence=IEA] [GO:0021610 "facial nerve
            morphogenesis" evidence=IEA] [GO:0030855 "epithelial cell
            differentiation" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0032880 "regulation of protein
            localization" evidence=IEA] [GO:0034504 "protein localization to
            nucleus" evidence=IEA] [GO:0035909 "aorta morphogenesis"
            evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045664 "regulation of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IEA]
            [GO:0051451 "myoblast migration" evidence=IEA] [GO:0060037
            "pharyngeal system development" evidence=IEA] [GO:0071599 "otic
            vesicle development" evidence=IEA] [GO:0072075 "metanephric
            mesenchyme development" evidence=IEA] [GO:0072095 "regulation of
            branch elongation involved in ureteric bud branching" evidence=IEA]
            [GO:0072107 "positive regulation of ureteric bud formation"
            evidence=IEA] [GO:0072172 "mesonephric tubule formation"
            evidence=IEA] [GO:0072193 "ureter smooth muscle cell
            differentiation" evidence=IEA] [GO:0072513 "positive regulation of
            secondary heart field cardioblast proliferation" evidence=IEA]
            [GO:0090103 "cochlea morphogenesis" evidence=IEA] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=IEA] [GO:0090191 "negative regulation of
            branching involved in ureteric bud morphogenesis" evidence=IEA]
            [GO:2000729 "positive regulation of mesenchymal cell proliferation
            involved in ureter development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:620906 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:CH473947 GeneTree:ENSGT00540000070251 OMA:GNLSHAR CTD:6495
            KO:K15614 RefSeq:NP_446211.1 UniGene:Rn.23396
            ProteinModelPortal:G3V970 SMR:G3V970 Ensembl:ENSRNOT00000034338
            GeneID:114634 KEGG:rno:114634 NextBio:618803 Uniprot:G3V970
        Length = 284

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/188 (59%), Positives = 139/188 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  + + N
Sbjct:   185 KERENTEN 192

 Score = 291 (107.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 53/100 (53%), Positives = 69/100 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 104

 Score = 186 (70.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   133 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 190


>ZFIN|ZDB-GENE-010412-1 [details] [associations]
            symbol:six2a "sine oculis-related homeobox 2a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0048793 "pronephros development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-010412-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048793
            GeneTree:ENSGT00540000070251 eggNOG:NOG289502 HOGENOM:HOG000261680
            OMA:VDSVHHH HSSP:P41778 HOVERGEN:HBG003609 OrthoDB:EOG4RJG27
            EMBL:BX537274 EMBL:BC079528 EMBL:AB040708 IPI:IPI00492862
            RefSeq:NP_571858.1 UniGene:Dr.8955 Ensembl:ENSDART00000080805
            GeneID:83415 KEGG:dre:83415 CTD:83415 InParanoid:Q98TH1
            NextBio:20934184 Uniprot:Q98TH1
        Length = 288

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/189 (58%), Positives = 140/189 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRNA 333
             +  + + N+
Sbjct:   185 KERENNENS 193

 Score = 292 (107.8 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
 Identities = 54/100 (54%), Positives = 68/100 (68%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P   FT EQ+ C+CE +QQ G+ ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLG 104

 Score = 184 (69.8 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>UNIPROTKB|E1BAD7 [details] [associations]
            symbol:SIX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0007286
            "spermatid development" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0002088 "lens development in camera-type eye"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0008285 GO:GO:0007286 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0002088
            GeneTree:ENSGT00540000070251 CTD:147912 OMA:AFQRGEY
            EMBL:DAAA02047383 IPI:IPI00692746 RefSeq:NP_001192695.1
            UniGene:Bt.26127 Ensembl:ENSBTAT00000017753 GeneID:513676
            KEGG:bta:513676 NextBio:20870979 Uniprot:E1BAD7
        Length = 738

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 114/175 (65%), Positives = 140/175 (80%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    84 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 143

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y +LES  F + +HA LQ L++R  Y E  + RGR LGAVDKYR+RKKFPLPKTIWDGEE
Sbjct:   144 YRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEE 203

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
             TVYCFKERSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   204 TVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 258

 Score = 253 (94.1 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
 Identities = 48/98 (48%), Positives = 69/98 (70%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    84 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 143

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y +LES  F + +HA LQ L++R  Y E  + RGR LG
Sbjct:   144 YRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG 181

 Score = 206 (77.6 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
             +RSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   210 ERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 258


>UNIPROTKB|F1PSK1 [details] [associations]
            symbol:SIX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00540000070251
            OMA:AFQRGEY EMBL:AAEX03000871 Ensembl:ENSCAFT00000007066
            Uniprot:F1PSK1
        Length = 739

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 114/175 (65%), Positives = 140/175 (80%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    85 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 144

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y +LES  F + +HA LQ L++R  Y E  + RGR LGAVDKYR+RKKFPLPKTIWDGEE
Sbjct:   145 YRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEE 204

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
             TVYCFKERSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   205 TVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 259

 Score = 253 (94.1 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
 Identities = 48/98 (48%), Positives = 69/98 (70%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    85 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 144

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y +LES  F + +HA LQ L++R  Y E  + RGR LG
Sbjct:   145 YRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG 182

 Score = 206 (77.6 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
             +RSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   211 ERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 259


>UNIPROTKB|Q8N196 [details] [associations]
            symbol:SIX5 "Homeobox protein SIX5" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0002088 "lens development in
            camera-type eye" evidence=IEA] [GO:0007286 "spermatid development"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0008285
            GO:GO:0007286 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0002088 Orphanet:107
            eggNOG:NOG244874 EMBL:X84813 EMBL:AC074212 EMBL:BC033204
            EMBL:BU859227 EMBL:AK074826 IPI:IPI00166124 IPI:IPI00410575
            RefSeq:NP_787071.2 UniGene:Hs.43314 ProteinModelPortal:Q8N196
            SMR:Q8N196 IntAct:Q8N196 MINT:MINT-2855964 STRING:Q8N196
            PhosphoSite:Q8N196 DMDM:150421671 PaxDb:Q8N196 PRIDE:Q8N196
            DNASU:147912 Ensembl:ENST00000317578 GeneID:147912 KEGG:hsa:147912
            UCSC:uc002pdb.3 CTD:147912 GeneCards:GC19M046268 H-InvDB:HIX0202857
            HGNC:HGNC:10891 HPA:HPA042068 MIM:600963 MIM:610896
            neXtProt:NX_Q8N196 PharmGKB:PA35791 HOGENOM:HOG000154329
            HOVERGEN:HBG050139 InParanoid:Q8N196 OMA:AFQRGEY OrthoDB:EOG4FN4K6
            PhylomeDB:Q8N196 GenomeRNAi:147912 NextBio:85758 Bgee:Q8N196
            CleanEx:HS_SIX5 Genevestigator:Q8N196 GermOnline:ENSG00000177045
            Uniprot:Q8N196
        Length = 739

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 114/175 (65%), Positives = 140/175 (80%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    84 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 143

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y +LES  F + +HA LQ L++R  Y E  + RGR LGAVDKYR+RKKFPLPKTIWDGEE
Sbjct:   144 YRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEE 203

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
             TVYCFKERSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   204 TVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 258

 Score = 253 (94.1 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
 Identities = 48/98 (48%), Positives = 69/98 (70%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    84 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 143

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y +LES  F + +HA LQ L++R  Y E  + RGR LG
Sbjct:   144 YRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG 181

 Score = 206 (77.6 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
             +RSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   210 ERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 258


>MGI|MGI:106220 [details] [associations]
            symbol:Six5 "sine oculis-related homeobox 5" species:10090
            "Mus musculus" [GO:0002088 "lens development in camera-type eye"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008285
            "negative regulation of cell proliferation" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:106220 GO:GO:0005634 GO:GO:0005737 GO:GO:0008285
            GO:GO:0007286 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0002088 EMBL:AC145199
            GeneTree:ENSGT00540000070251 eggNOG:NOG244874 CTD:147912
            HOGENOM:HOG000154329 HOVERGEN:HBG050139 OMA:AFQRGEY
            OrthoDB:EOG4FN4K6 EMBL:D83146 IPI:IPI00136354 PIR:S74254
            RefSeq:NP_035513.1 UniGene:Mm.3410 ProteinModelPortal:P70178
            SMR:P70178 IntAct:P70178 STRING:P70178 PhosphoSite:P70178
            PRIDE:P70178 Ensembl:ENSMUST00000049454 GeneID:20475 KEGG:mmu:20475
            UCSC:uc009fkr.1 InParanoid:P70178 NextBio:298595 Bgee:P70178
            Genevestigator:P70178 GermOnline:ENSMUSG00000040841 Uniprot:P70178
        Length = 719

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 114/175 (65%), Positives = 140/175 (80%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    77 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 136

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEE 266
             Y +LES  F + +HA LQ L++R  Y E  + RGR LGAVDKYR+RKKFPLPKTIWDGEE
Sbjct:   137 YQLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEE 196

Query:   267 TVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
             TVYCFKERSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   197 TVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 251

 Score = 253 (94.1 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
 Identities = 48/98 (48%), Positives = 69/98 (70%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    77 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 136

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             Y +LES  F + +HA LQ L++R  Y E  + RGR LG
Sbjct:   137 YQLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG 174

 Score = 206 (77.6 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
             +RSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   203 ERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 251


>ZFIN|ZDB-GENE-040718-155 [details] [associations]
            symbol:six1a "sine oculis homeobox homolog 1a"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=IMP] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:2000980 "regulation of inner ear receptor cell differentiation"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-040718-155 GO:GO:0005634 GO:GO:0043565
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000981 HOVERGEN:HBG003609
            EMBL:BC076015 EMBL:EU109509 IPI:IPI00483069 RefSeq:NP_001009904.1
            UniGene:Dr.88608 STRING:Q6DHF9 DNASU:494168 GeneID:494168
            KEGG:dre:494168 CTD:494168 InParanoid:Q6DHF9 NextBio:20865657
            GO:GO:2000980 Uniprot:Q6DHF9
        Length = 283

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 109/188 (57%), Positives = 140/188 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY ILES+ F +  H ++QQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:    65 ELYKILESYQFSTHNHPKMQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 RSIQRSRN 332
             +  +   N
Sbjct:   185 KERENGEN 192

 Score = 285 (105.4 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 51/100 (51%), Positives = 70/100 (70%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY ILES+ F +  H ++QQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKILESYQFSTHNHPKMQQLWLKAHYVEAEKLRGRPLG 104

 Score = 184 (69.8 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR+ L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>RGD|620906 [details] [associations]
            symbol:Six1 "SIX homeobox 1" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0001657 "ureteric bud
            development" evidence=ISO] [GO:0001658 "branching involved in
            ureteric bud morphogenesis" evidence=ISO] [GO:0001759 "organ
            induction" evidence=ISO] [GO:0001822 "kidney development"
            evidence=ISO] [GO:0003151 "outflow tract morphogenesis"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
            factor complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0007389 "pattern specification process"
            evidence=ISO] [GO:0007519 "skeletal muscle tissue development"
            evidence=ISO] [GO:0007605 "sensory perception of sound"
            evidence=ISO] [GO:0008582 "regulation of synaptic growth at
            neuromuscular junction" evidence=ISO] [GO:0010468 "regulation of
            gene expression" evidence=ISO] [GO:0021610 "facial nerve
            morphogenesis" evidence=ISO] [GO:0030855 "epithelial cell
            differentiation" evidence=ISO] [GO:0030878 "thyroid gland
            development" evidence=ISO] [GO:0032880 "regulation of protein
            localization" evidence=ISO] [GO:0034504 "protein localization to
            nucleus" evidence=ISO] [GO:0035909 "aorta morphogenesis"
            evidence=ISO] [GO:0042472 "inner ear morphogenesis" evidence=ISO]
            [GO:0042474 "middle ear morphogenesis" evidence=ISO] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISO]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISO] [GO:0045664 "regulation of neuron differentiation"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0048538 "thymus development" evidence=ISO] [GO:0048665 "neuron
            fate specification" evidence=ISO] [GO:0048699 "generation of
            neurons" evidence=ISO] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=ISO] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
            morphogenesis" evidence=ISO] [GO:0048839 "inner ear development"
            evidence=ISO] [GO:0048856 "anatomical structure development"
            evidence=ISO] [GO:0051451 "myoblast migration" evidence=ISO]
            [GO:0060037 "pharyngeal system development" evidence=ISO]
            [GO:0071599 "otic vesicle development" evidence=ISO] [GO:0072001
            "renal system development" evidence=ISO] [GO:0072075 "metanephric
            mesenchyme development" evidence=ISO] [GO:0072095 "regulation of
            branch elongation involved in ureteric bud branching" evidence=ISO]
            [GO:0072107 "positive regulation of ureteric bud formation"
            evidence=ISO] [GO:0072172 "mesonephric tubule formation"
            evidence=ISO] [GO:0072193 "ureter smooth muscle cell
            differentiation" evidence=ISO] [GO:0072513 "positive regulation of
            secondary heart field cardioblast proliferation" evidence=ISO]
            [GO:0090103 "cochlea morphogenesis" evidence=ISO] [GO:0090190
            "positive regulation of branching involved in ureteric bud
            morphogenesis" evidence=ISO] [GO:0090191 "negative regulation of
            branching involved in ureteric bud morphogenesis" evidence=ISO]
            [GO:2000729 "positive regulation of mesenchymal cell proliferation
            involved in ureter development" evidence=ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:620906 GO:GO:0045893
            GO:GO:0045664 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
            GO:GO:0043524 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
            GO:GO:0044212 GO:GO:0042472 GO:GO:0007605 GO:GO:0060037
            GO:GO:0048538 GO:GO:0090190 GO:GO:0071599 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048701 GO:GO:0003151 GO:GO:0035909
            GO:GO:0034504 GO:GO:0030855 GO:GO:0072075 GO:GO:0090191
            GO:GO:0072193 GO:GO:0001759 GO:GO:0007519 GO:GO:0090103
            GO:GO:0030878 GO:GO:0042474 GO:GO:0072513 GO:GO:0072107
            eggNOG:NOG289502 HOGENOM:HOG000261680 GO:GO:0072095 HSSP:P41778
            GO:GO:0072172 GO:GO:0021610 GO:GO:2000729 HOVERGEN:HBG003609
            OrthoDB:EOG4RJG27 GO:GO:0051451 UniGene:Rn.23396 EMBL:AF323957
            IPI:IPI00190439 ProteinModelPortal:Q99P83 STRING:Q99P83
            UCSC:RGD:620906 InParanoid:Q99P83 Genevestigator:Q99P83
            Uniprot:Q99P83
        Length = 272

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 110/184 (59%), Positives = 137/184 (74%)

Query:   149 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHELYA 208
             FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F ELY 
Sbjct:     3 FTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYK 62

Query:   209 ILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEETV 268
             ILESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDGEET 
Sbjct:    63 ILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 122

Query:   269 YCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQ 328
             YCFKE+SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + +  +
Sbjct:   123 YCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERE 182

Query:   329 RSRN 332
              + N
Sbjct:   183 NTEN 186

 Score = 283 (104.7 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 52/96 (54%), Positives = 67/96 (69%)

Query:    10 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHELYA 69
             FT EQ+ C+CE +QQ G+ ++L  FLWSLP  + +   ESVL+A+AVVA+ R  F ELY 
Sbjct:     3 FTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYK 62

Query:    70 ILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ILESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    63 ILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLG 98

 Score = 186 (70.5 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 34/58 (58%), Positives = 43/58 (74%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             ++SR  L+E Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + + +  T
Sbjct:   127 EKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENT 184


>ZFIN|ZDB-GENE-080723-23 [details] [associations]
            symbol:six2b "sine oculis-related homeobox 2b"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-080723-23 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00540000070251 eggNOG:NOG289502 HOGENOM:HOG000261680
            HOVERGEN:HBG003609 OrthoDB:EOG4RJG27 EMBL:CR932018 EMBL:BC163151
            EMBL:BC163156 IPI:IPI00491934 RefSeq:NP_001122206.1
            UniGene:Dr.135635 Ensembl:ENSDART00000077155 GeneID:566454
            KEGG:dre:566454 CTD:566454 OMA:ENEGANP NextBio:20888189
            Uniprot:B3DIJ7
        Length = 285

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 110/181 (60%), Positives = 134/181 (74%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P   FT EQ+ C+CE +QQ G  ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGSIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY +LESH F    H +LQQLW++ HY E  K+RGR LGAV KYR+R+KFPLP++IWDG
Sbjct:    65 ELYKVLESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDG 124

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR  LKE Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   125 EETSYCFKEKSRCVLKEWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEA 184

Query:   325 R 325
             +
Sbjct:   185 K 185

 Score = 290 (107.1 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 53/100 (53%), Positives = 67/100 (67%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P   FT EQ+ C+CE +QQ G  ++L  FLWSLP  E +   ESVL+A+AVVA+ R  F 
Sbjct:     5 PTFGFTQEQVACVCEVLQQGGSIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFR 64

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY +LESH F    H +LQQLW++ HY E  K+RGR LG
Sbjct:    65 ELYKVLESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLG 104

 Score = 183 (69.5 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 37/57 (64%), Positives = 43/57 (75%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             ++SR  LKE Y  N YP+P EKR+L+E TGLT TQVSNWFKNRRQRDR  +  AK R
Sbjct:   133 EKSRCVLKEWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAE--AKER 187


>FB|FBgn0003460 [details] [associations]
            symbol:so "sine oculis" species:7227 "Drosophila
            melanogaster" [GO:0007623 "circadian rhythm" evidence=IGI]
            [GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=ISS] [GO:0001744 "optic
            lobe placode formation" evidence=IMP] [GO:0048749 "compound eye
            development" evidence=NAS] [GO:0001746 "Bolwig's organ
            morphogenesis" evidence=IMP] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=TAS] [GO:0007455
            "eye-antennal disc morphogenesis" evidence=TAS] [GO:0008347 "glial
            cell migration" evidence=IMP] [GO:0009649 "entrainment of circadian
            clock" evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA;IMP] [GO:0035271 "ring gland
            development" evidence=IMP] [GO:0008134 "transcription factor
            binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
            [GO:0001745 "compound eye morphogenesis" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AE013599 GO:GO:0005634 GO:GO:0009649 GO:GO:0007623
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007283 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0008347 GO:GO:0001746
            GO:GO:0007455 GO:GO:0001744 GO:GO:0001745 GO:GO:0035271
            GeneTree:ENSGT00540000070251 eggNOG:NOG289502 OrthoDB:EOG4TTF0B
            KO:K15614 EMBL:S77459 EMBL:L31626 EMBL:BT029256 PIR:S50342
            RefSeq:NP_476733.1 UniGene:Dm.4727 ProteinModelPortal:Q27350
            SMR:Q27350 DIP:DIP-18228N IntAct:Q27350 MINT:MINT-302975
            STRING:Q27350 PRIDE:Q27350 EnsemblMetazoa:FBtr0088970 GeneID:35662
            KEGG:dme:Dmel_CG11121 CTD:35662 FlyBase:FBgn0003460
            InParanoid:Q27350 OMA:AVAYSHL PhylomeDB:Q27350 GenomeRNAi:35662
            NextBio:794611 Bgee:Q27350 Uniprot:Q27350
        Length = 416

 Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
 Identities = 108/195 (55%), Positives = 143/195 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 204
             P+  FT EQ+ C+CE +QQ+G+ ++L  FLWSLP  + ++  ESVL+A+AVVA+ R  + 
Sbjct:    99 PSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQYK 158

Query:   205 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDG 264
             ELY +LE H+F ++ HA+LQ LW++ HY E  K+RGR LGAV KYR+R+KFPLP+TIWDG
Sbjct:   159 ELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDG 218

Query:   265 EETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 324
             EET YCFKE+SR+ L++ Y  N YP+P EKR L+E TGLT TQVSNWFKNRRQRDR  + 
Sbjct:   219 EETSYCFKEKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEH 278

Query:   325 RSIQRSRNALKECYD 339
             +     +  L    D
Sbjct:   279 KDGSTDKQHLDSSSD 293

 Score = 286 (105.7 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
 Identities = 50/100 (50%), Positives = 73/100 (73%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFH 65
             P+  FT EQ+ C+CE +QQ+G+ ++L  FLWSLP  + ++  ESVL+A+AVVA+ R  + 
Sbjct:    99 PSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPQCDKLQLNESVLKAKAVVAFHRGQYK 158

Query:    66 ELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             ELY +LE H+F ++ HA+LQ LW++ HY E  K+RGR LG
Sbjct:   159 ELYRLLEHHHFSAQNHAKLQALWLKAHYVEAEKLRGRPLG 198

 Score = 179 (68.1 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQR 380
             ++SR+ L++ Y  N YP+P EKR L+E TGLT TQVSNWFKNRRQRDR  + +
Sbjct:   227 EKSRSVLRDWYSHNPYPSPREKRDLAEATGLTTTQVSNWFKNRRQRDRAAEHK 279


>UNIPROTKB|O42406 [details] [associations]
            symbol:SIX3 "Homeobox protein SIX3" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001654 "eye development" evidence=ISS] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0007420 "brain development" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0030178 "negative regulation of Wnt receptor signaling pathway"
            evidence=ISS] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0045892 GO:GO:0007420 GO:GO:0003677 GO:GO:0043565
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0030178
            GO:GO:0001654 HOVERGEN:HBG003609 EMBL:Y15106 EMBL:AY373324
            IPI:IPI00577709 RefSeq:NP_989695.1 UniGene:Gga.291
            ProteinModelPortal:O42406 PRIDE:O42406 GeneID:378786
            KEGG:gga:378786 CTD:6496 NextBio:20813819 Uniprot:O42406
        Length = 314

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 107/189 (56%), Positives = 143/189 (75%)

Query:   136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLR 191
             E L+M +L P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LR
Sbjct:    57 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 115

Query:   192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
             ARAVVA+    F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG VDKYR+
Sbjct:   116 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 175

Query:   252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
             RKKFPLP+TIWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct:   176 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 235

Query:   312 FKNRRQRDR 320
             FKNRRQRDR
Sbjct:   236 FKNRRQRDR 244

 Score = 273 (101.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LRARAVVA+  
Sbjct:    65 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 124

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG
Sbjct:   125 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 168

 Score = 174 (66.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   197 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 251


>UNIPROTKB|E1BMT1 [details] [associations]
            symbol:SIX3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060235 "lens
            induction in camera-type eye" evidence=IEA] [GO:0048512 "circadian
            behavior" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
            signaling pathway" evidence=IEA] [GO:0021797 "forebrain
            anterior/posterior pattern specification" evidence=IEA] [GO:0021537
            "telencephalon development" evidence=IEA] [GO:0021536 "diencephalon
            development" evidence=IEA] [GO:0006606 "protein import into
            nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0045892 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0006606 GO:GO:0060235
            GO:GO:0030178 GO:GO:0021797 GO:GO:0021537 GO:GO:0021536
            GeneTree:ENSGT00540000070251 CTD:6496 OMA:ADPHHRS GO:GO:0048512
            EMBL:DAAA02030700 IPI:IPI00693485 RefSeq:NP_001180053.1
            UniGene:Bt.7524 Ensembl:ENSBTAT00000038682 GeneID:616756
            KEGG:bta:616756 NextBio:20900304 Uniprot:E1BMT1
        Length = 328

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 107/189 (56%), Positives = 143/189 (75%)

Query:   136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLR 191
             E L+M +L P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LR
Sbjct:    71 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 129

Query:   192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
             ARAVVA+    F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG VDKYR+
Sbjct:   130 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 189

Query:   252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
             RKKFPLP+TIWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct:   190 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 249

Query:   312 FKNRRQRDR 320
             FKNRRQRDR
Sbjct:   250 FKNRRQRDR 258

 Score = 273 (101.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LRARAVVA+  
Sbjct:    79 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 138

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG
Sbjct:   139 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 182

 Score = 174 (66.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   211 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 265


>UNIPROTKB|E2R195 [details] [associations]
            symbol:SIX3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00540000070251 OMA:ADPHHRS EMBL:AAEX03007480
            EMBL:AAEX03007481 Ensembl:ENSCAFT00000004014 Uniprot:E2R195
        Length = 338

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 107/189 (56%), Positives = 143/189 (75%)

Query:   136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLR 191
             E L+M +L P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LR
Sbjct:    79 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 137

Query:   192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
             ARAVVA+    F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG VDKYR+
Sbjct:   138 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 197

Query:   252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
             RKKFPLP+TIWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct:   198 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 257

Query:   312 FKNRRQRDR 320
             FKNRRQRDR
Sbjct:   258 FKNRRQRDR 266

 Score = 273 (101.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LRARAVVA+  
Sbjct:    87 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 146

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG
Sbjct:   147 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 190

 Score = 174 (66.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   219 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 273


>UNIPROTKB|O95343 [details] [associations]
            symbol:SIX3 "Homeobox protein SIX3" species:9606 "Homo
            sapiens" [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006606 "protein import into nucleus"
            evidence=IEA] [GO:0021536 "diencephalon development" evidence=IEA]
            [GO:0021537 "telencephalon development" evidence=IEA] [GO:0021797
            "forebrain anterior/posterior pattern specification" evidence=IEA]
            [GO:0030178 "negative regulation of Wnt receptor signaling pathway"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048512 "circadian behavior" evidence=IEA] [GO:0060235 "lens
            induction in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007420 "brain development" evidence=TAS]
            [GO:0007601 "visual perception" evidence=TAS] InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0045892 EMBL:CH471053
            GO:GO:0007420 GO:GO:0007601 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0006606
            GO:GO:0060235 GO:GO:0030178 GO:GO:0021797 GO:GO:0021537
            Orphanet:93925 Orphanet:93924 Orphanet:280200 Orphanet:93926
            Orphanet:220386 Orphanet:280195 GO:GO:0021536 Orphanet:799
            eggNOG:NOG244436 HOGENOM:HOG000261680 HOVERGEN:HBG003609 CTD:6496
            EMBL:AF092047 EMBL:AF049339 EMBL:AF083891 EMBL:AJ012611
            EMBL:AC012354 IPI:IPI00030013 RefSeq:NP_005404.1 UniGene:Hs.567336
            ProteinModelPortal:O95343 SMR:O95343 STRING:O95343
            PhosphoSite:O95343 PRIDE:O95343 DNASU:6496 Ensembl:ENST00000260653
            GeneID:6496 KEGG:hsa:6496 UCSC:uc002run.2 GeneCards:GC02P045168
            H-InvDB:HIX0161628 HGNC:HGNC:10889 MIM:157170 MIM:603714
            neXtProt:NX_O95343 PharmGKB:PA35789 InParanoid:O95343 OMA:ADPHHRS
            OrthoDB:EOG4ZKJMW PhylomeDB:O95343 GenomeRNAi:6496 NextBio:25251
            ArrayExpress:O95343 Bgee:O95343 CleanEx:HS_SIX3
            Genevestigator:O95343 GermOnline:ENSG00000138083 GO:GO:0048512
            Uniprot:O95343
        Length = 332

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 107/189 (56%), Positives = 143/189 (75%)

Query:   136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLR 191
             E L+M +L P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LR
Sbjct:    75 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 133

Query:   192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
             ARAVVA+    F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG VDKYR+
Sbjct:   134 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 193

Query:   252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
             RKKFPLP+TIWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct:   194 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 253

Query:   312 FKNRRQRDR 320
             FKNRRQRDR
Sbjct:   254 FKNRRQRDR 262

 Score = 273 (101.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LRARAVVA+  
Sbjct:    83 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 142

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG
Sbjct:   143 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 186

 Score = 174 (66.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   215 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 269


>MGI|MGI:102764 [details] [associations]
            symbol:Six3 "sine oculis-related homeobox 3" species:10090
            "Mus musculus" [GO:0001654 "eye development" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005102 "receptor binding" evidence=ISO]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
            nucleus" evidence=IDA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007420 "brain development"
            evidence=IMP] [GO:0021536 "diencephalon development" evidence=IGI]
            [GO:0021537 "telencephalon development" evidence=IMP] [GO:0021797
            "forebrain anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0030178 "negative regulation of Wnt receptor
            signaling pathway" evidence=IMP] [GO:0043010 "camera-type eye
            development" evidence=IGI] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0048512 "circadian behavior"
            evidence=IMP] [GO:0060235 "lens induction in camera-type eye"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:102764
            GO:GO:0005634 GO:GO:0045892 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0006606
            GO:GO:0060235 GO:GO:0030178 GO:GO:0021797 GO:GO:0021537
            GO:GO:0021536 eggNOG:NOG244436 GeneTree:ENSGT00540000070251
            HOVERGEN:HBG003609 CTD:6496 OrthoDB:EOG4ZKJMW GO:GO:0048512
            EMBL:X90871 EMBL:D83144 EMBL:D83145 EMBL:BC098096 IPI:IPI00123350
            IPI:IPI00986785 PIR:S74255 RefSeq:NP_035511.2 UniGene:Mm.370208
            UniGene:Mm.391586 ProteinModelPortal:Q62233 SMR:Q62233
            DIP:DIP-46499N IntAct:Q62233 STRING:Q62233 PhosphoSite:Q62233
            PRIDE:Q62233 Ensembl:ENSMUST00000175898 GeneID:20473 KEGG:mmu:20473
            UCSC:uc007nvy.1 InParanoid:Q4QQQ3 NextBio:298587 Bgee:Q62233
            Genevestigator:Q62233 GermOnline:ENSMUSG00000038805 Uniprot:Q62233
        Length = 333

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 107/189 (56%), Positives = 143/189 (75%)

Query:   136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLR 191
             E L+M +L P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LR
Sbjct:    76 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 134

Query:   192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
             ARAVVA+    F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG VDKYR+
Sbjct:   135 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 194

Query:   252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
             RKKFPLP+TIWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct:   195 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 254

Query:   312 FKNRRQRDR 320
             FKNRRQRDR
Sbjct:   255 FKNRRQRDR 263

 Score = 273 (101.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LRARAVVA+  
Sbjct:    84 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 143

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG
Sbjct:   144 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 187

 Score = 174 (66.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   216 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 270


>RGD|620909 [details] [associations]
            symbol:Six3 "SIX homeobox 3" species:10116 "Rattus norvegicus"
            [GO:0001654 "eye development" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=ISO] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=ISO] [GO:0005102 "receptor binding"
            evidence=IMP] [GO:0005634 "nucleus" evidence=ISO] [GO:0006606
            "protein import into nucleus" evidence=ISO] [GO:0007420 "brain
            development" evidence=ISO] [GO:0021536 "diencephalon development"
            evidence=ISO] [GO:0021537 "telencephalon development" evidence=ISO]
            [GO:0021797 "forebrain anterior/posterior pattern specification"
            evidence=ISO] [GO:0030178 "negative regulation of Wnt receptor
            signaling pathway" evidence=ISO] [GO:0043010 "camera-type eye
            development" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0048512 "circadian behavior"
            evidence=ISO] [GO:0060235 "lens induction in camera-type eye"
            evidence=ISO] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 RGD:620909 GO:GO:0005634
            GO:GO:0045892 GO:GO:0043565 GO:GO:0005102 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG244436
            HOGENOM:HOG000261680 HSSP:P41778 HOVERGEN:HBG003609 CTD:6496
            OrthoDB:EOG4ZKJMW IPI:IPI00192470 EMBL:AB030833 RefSeq:NP_076480.1
            UniGene:Rn.123641 ProteinModelPortal:Q9ET75 DIP:DIP-46497N
            STRING:Q9ET75 GeneID:78974 KEGG:rno:78974 UCSC:RGD:620909
            InParanoid:Q9ET75 NextBio:614444 Genevestigator:Q9ET75
            Uniprot:Q9ET75
        Length = 337

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 107/189 (56%), Positives = 143/189 (75%)

Query:   136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLR 191
             E L+M +L P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LR
Sbjct:    80 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 138

Query:   192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
             ARAVVA+    F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG VDKYR+
Sbjct:   139 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 198

Query:   252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
             RKKFPLP+TIWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct:   199 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 258

Query:   312 FKNRRQRDR 320
             FKNRRQRDR
Sbjct:   259 FKNRRQRDR 267

 Score = 273 (101.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LRARAVVA+  
Sbjct:    88 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 147

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG
Sbjct:   148 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 191

 Score = 174 (66.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   220 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 274


>UNIPROTKB|E9PTM1 [details] [associations]
            symbol:Six3 "Protein Six3" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 RGD:620909 GO:GO:0005634
            GO:GO:0045892 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0006606 GO:GO:0060235
            GO:GO:0030178 GO:GO:0021797 GO:GO:0021537 GO:GO:0021536
            GeneTree:ENSGT00540000070251 GO:GO:0048512 IPI:IPI00192470
            Ensembl:ENSRNOT00000036034 Uniprot:E9PTM1
        Length = 336

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 107/189 (56%), Positives = 143/189 (75%)

Query:   136 EYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLR 191
             E L+M +L P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LR
Sbjct:    79 EELSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR 137

Query:   192 ARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRI 251
             ARAVVA+    F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG VDKYR+
Sbjct:   138 ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV 197

Query:   252 RKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNW 311
             RKKFPLP+TIWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NW
Sbjct:   198 RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW 257

Query:   312 FKNRRQRDR 320
             FKNRRQRDR
Sbjct:   258 FKNRRQRDR 266

 Score = 273 (101.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LRARAVVA+  
Sbjct:    87 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 146

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F +LY ILE+H F  + H +LQ +W+  HY+E  K+RGR LG
Sbjct:   147 GNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLG 190

 Score = 174 (66.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   219 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 273


>ZFIN|ZDB-GENE-990415-127 [details] [associations]
            symbol:six3a "sine oculis homeobox homolog 3a"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007420 "brain development" evidence=IMP] InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-127 GO:GO:0005634 GO:GO:0007420 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00540000070251 HOVERGEN:HBG003609 EMBL:BX537274
            EMBL:BC059414 IPI:IPI00612884 UniGene:Dr.616 STRING:Q6PCA5
            Ensembl:ENSDART00000080808 InParanoid:Q6PCA5 OMA:YHIVESH
            Uniprot:Q6PCA5
        Length = 294

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 107/192 (55%), Positives = 144/192 (75%)

Query:   133 KAQEYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQES 188
             ++ E L+M +L P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES
Sbjct:    34 RSPEDLSMFQL-PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHES 92

Query:   189 VLRARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDK 248
             +LRARAVVA+    F +LY ILE+H F    H +LQ +W+  HY+E  K+RGR LG VDK
Sbjct:    93 ILRARAVVAFHTGNFRDLYHILENHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDK 152

Query:   249 YRIRKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQV 308
             YR+RKKFPLP+TIWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV
Sbjct:   153 YRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQV 212

Query:   309 SNWFKNRRQRDR 320
              NWFKNRRQRDR
Sbjct:   213 GNWFKNRRQRDR 224

 Score = 271 (100.5 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 51/104 (49%), Positives = 71/104 (68%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+PEQ+  +CE ++++GD ++L  FLWSLP  P   EAI   ES+LRARAVVA+  
Sbjct:    45 PTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHT 104

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F +LY ILE+H F    H +LQ +W+  HY+E  K+RGR LG
Sbjct:   105 GNFRDLYHILENHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLG 148

 Score = 174 (66.3 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   177 ERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 231


>UNIPROTKB|F1PN35 [details] [associations]
            symbol:SIX6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00540000070251 OMA:TASMFQL EMBL:AAEX03005765
            Ensembl:ENSCAFT00000024751 Uniprot:F1PN35
        Length = 308

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 105/196 (53%), Positives = 144/196 (73%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 200
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:    66 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 125

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG VDKYR+RKKFPLP+T
Sbjct:   126 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 185

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR
Sbjct:   186 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 245

Query:   321 TPQQRSIQRSRNALKE 336
                 ++ +  +  L +
Sbjct:   246 AAAAKNSRLQQQVLSQ 261

 Score = 271 (100.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
 Identities = 52/104 (50%), Positives = 73/104 (70%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:    66 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 125

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG
Sbjct:   126 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLG 169

 Score = 169 (64.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
 Identities = 33/56 (58%), Positives = 43/56 (76%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKN 383
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKN
Sbjct:   198 ERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKN 251


>UNIPROTKB|F1SSH9 [details] [associations]
            symbol:SIX6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00540000070251 OMA:TASMFQL EMBL:CU463073
            Ensembl:ENSSSCT00000005606 Uniprot:F1SSH9
        Length = 292

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 108/209 (51%), Positives = 150/209 (71%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 200
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:    51 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 110

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG VDKYR+RKKFPLP+T
Sbjct:   111 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 170

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR
Sbjct:   171 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 230

Query:   321 TPQQRSIQRSRNALKECYDKNRYPNPDEK 349
                 ++ +  +  L +    +R   P+E+
Sbjct:   231 AAAAKN-RLQQQVLSQ--GSSRALRPEEE 256

 Score = 271 (100.5 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 52/104 (50%), Positives = 73/104 (70%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:    51 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 110

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG
Sbjct:   111 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLG 154

 Score = 174 (66.3 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   183 ERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 237


>ZFIN|ZDB-GENE-050522-308 [details] [associations]
            symbol:six6b "sine oculis-related homeobox 6b"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050522-308
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 eggNOG:NOG244436 GeneTree:ENSGT00540000070251
            HOGENOM:HOG000261680 HOVERGEN:HBG003609 OrthoDB:EOG4JQ3ZD
            EMBL:BX649231 EMBL:BC095226 IPI:IPI00489122 RefSeq:NP_001018421.1
            UniGene:Dr.82855 Ensembl:ENSDART00000125039 GeneID:553611
            KEGG:dre:553611 CTD:553611 InParanoid:Q5TYZ2 OMA:WLESHYQ
            NextBio:20880348 Uniprot:Q5TYZ2
        Length = 245

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 104/180 (57%), Positives = 137/180 (76%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 200
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   E +   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEVLNRNESVLRARAIVAFHT 64

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               F ELY ILE+H F  + H++LQ LW+  HY+E  K+RGR LG VDKYR+RKKFPLPKT
Sbjct:    65 GNFRELYHILENHKFTKESHSKLQALWLESHYQEAEKLRGRPLGPVDKYRVRKKFPLPKT 124

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR
Sbjct:   125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 184

 Score = 269 (99.8 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   E +   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEVLNRNESVLRARAIVAFHT 64

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F ELY ILE+H F  + H++LQ LW+  HY+E  K+RGR LG
Sbjct:    65 GNFRELYHILENHKFTKESHSKLQALWLESHYQEAEKLRGRPLG 108

 Score = 174 (66.3 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   137 ERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 191


>UNIPROTKB|O95475 [details] [associations]
            symbol:SIX6 "Homeobox protein SIX6" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0007601 "visual
            perception" evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Orphanet:264200
            Orphanet:2543 eggNOG:NOG244436 HOGENOM:HOG000261680
            HOVERGEN:HBG003609 CTD:4990 EMBL:AF031648 EMBL:AJ011785
            EMBL:AF141651 EMBL:BC069413 EMBL:AB041399 IPI:IPI00030821
            RefSeq:NP_031400.2 UniGene:Hs.194756 ProteinModelPortal:O95475
            SMR:O95475 STRING:O95475 PhosphoSite:O95475 PaxDb:O95475
            PRIDE:O95475 DNASU:4990 Ensembl:ENST00000327720 GeneID:4990
            KEGG:hsa:4990 UCSC:uc001xfa.4 GeneCards:GC14P060975 HGNC:HGNC:10892
            HPA:HPA001403 MIM:212550 MIM:606326 neXtProt:NX_O95475
            PharmGKB:PA35792 InParanoid:O95475 OMA:TASMFQL OrthoDB:EOG4JQ3ZD
            PhylomeDB:O95475 GenomeRNAi:4990 NextBio:19216 ArrayExpress:O95475
            Bgee:O95475 CleanEx:HS_SIX6 Genevestigator:O95475
            GermOnline:ENSG00000184302 Uniprot:O95475
        Length = 246

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 104/180 (57%), Positives = 138/180 (76%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 200
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG VDKYR+RKKFPLP+T
Sbjct:    65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 124

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR
Sbjct:   125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 184

 Score = 271 (100.5 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 52/104 (50%), Positives = 73/104 (70%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG
Sbjct:    65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLG 108

 Score = 174 (66.3 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   137 ERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 191


>MGI|MGI:1341840 [details] [associations]
            symbol:Six6 "sine oculis-related homeobox 6" species:10090
            "Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:1341840 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG244436
            GeneTree:ENSGT00540000070251 HOGENOM:HOG000261680
            HOVERGEN:HBG003609 CTD:4990 OMA:TASMFQL OrthoDB:EOG4JQ3ZD
            EMBL:AF050130 EMBL:AF135267 EMBL:AJ011787 EMBL:AK017544
            EMBL:AK029309 IPI:IPI00140058 RefSeq:NP_035514.1 UniGene:Mm.57138
            ProteinModelPortal:Q9QZ28 SMR:Q9QZ28 IntAct:Q9QZ28 STRING:Q9QZ28
            PhosphoSite:Q9QZ28 PRIDE:Q9QZ28 Ensembl:ENSMUST00000021519
            GeneID:20476 KEGG:mmu:20476 InParanoid:Q9QZ28 NextBio:298599
            Bgee:Q9QZ28 Genevestigator:Q9QZ28 GermOnline:ENSMUSG00000021099
            Uniprot:Q9QZ28
        Length = 246

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 104/180 (57%), Positives = 138/180 (76%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 200
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG VDKYR+RKKFPLP+T
Sbjct:    65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 124

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR
Sbjct:   125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 184

 Score = 271 (100.5 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 52/104 (50%), Positives = 73/104 (70%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG
Sbjct:    65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLG 108

 Score = 174 (66.3 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   137 ERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 191


>RGD|1310497 [details] [associations]
            symbol:Six6 "SIX homeobox 6" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            SMART:SM00389 RGD:1310497 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH473947
            GeneTree:ENSGT00540000070251 CTD:4990 OMA:TASMFQL OrthoDB:EOG4JQ3ZD
            IPI:IPI00367423 RefSeq:NP_001101502.1 UniGene:Rn.21301 SMR:D3ZCC7
            Ensembl:ENSRNOT00000008880 GeneID:314221 KEGG:rno:314221
            UCSC:RGD:1310497 NextBio:667310 Uniprot:D3ZCC7
        Length = 246

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 104/180 (57%), Positives = 138/180 (76%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 200
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG VDKYR+RKKFPLP+T
Sbjct:    65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 124

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR
Sbjct:   125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 184

 Score = 271 (100.5 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 52/104 (50%), Positives = 73/104 (70%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHG 64

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               + ELY ILE+H F  + HA+LQ LW+  HY+E  K+RGR LG
Sbjct:    65 GNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLG 108

 Score = 174 (66.3 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   137 ERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 191


>UNIPROTKB|O93307 [details] [associations]
            symbol:SIX6 "Homeobox protein SIX6" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HOVERGEN:HBG003609 EMBL:AF050131 EMBL:AJ011786 IPI:IPI00603410
            RefSeq:NP_990325.1 UniGene:Gga.333 ProteinModelPortal:O93307
            GeneID:395843 KEGG:gga:395843 CTD:4990 NextBio:20815910
            Uniprot:O93307
        Length = 246

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 103/180 (57%), Positives = 137/180 (76%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 200
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHT 64

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               + ELY ILE+H F  + H +LQ LW+  HY+E  K+RGR LG VDKYR+RKKFPLP+T
Sbjct:    65 GNYRELYHILENHKFTKESHGKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 124

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR
Sbjct:   125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 184

 Score = 269 (99.8 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
 Identities = 51/104 (49%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P   EA+   ESVLRARA+VA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDIERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHT 64

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               + ELY ILE+H F  + H +LQ LW+  HY+E  K+RGR LG
Sbjct:    65 GNYRELYHILENHKFTKESHGKLQALWLEAHYQEAEKLRGRPLG 108

 Score = 174 (66.3 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   137 ERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 191


>ZFIN|ZDB-GENE-990415-128 [details] [associations]
            symbol:six3b "sine oculis homeobox homolog 3b"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=IGI] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007420 "brain development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-990415-128 GO:GO:0005634 GO:GO:0007420
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0048596 eggNOG:NOG244436 GeneTree:ENSGT00540000070251
            HOGENOM:HOG000261680 HSSP:P41778 HOVERGEN:HBG003609 EMBL:CR932018
            EMBL:AF030281 EMBL:BC059425 EMBL:AB004881 IPI:IPI00489175
            RefSeq:NP_571438.1 UniGene:Dr.75402 STRING:O73709
            Ensembl:ENSDART00000077157 GeneID:30636 KEGG:dre:30636 CTD:30636
            InParanoid:O73709 OrthoDB:EOG4SQWXJ NextBio:20806994 Uniprot:O73709
        Length = 293

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 106/192 (55%), Positives = 141/192 (73%)

Query:   133 KAQEYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQES 188
             ++ E L M +L P ++F+ EQ+  +CE ++++GD ++L  FLWSLP  P   +AI   ES
Sbjct:    34 RSPEDLPMFQL-PTLNFSAEQVASVCETLEETGDIERLGRFLWSLPVAPGACDAINKHES 92

Query:   189 VLRARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDK 248
             + RARAVVAY   +F ELY ILE+H F    H +LQ +W+  HY+E  K+RGR LG VDK
Sbjct:    93 IQRARAVVAYHTGSFRELYHILETHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDK 152

Query:   249 YRIRKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQV 308
             YR+RKKFPLP+TIWDGE+  +CFKER+R  L+E Y ++ YPNP +KR+L++ TGLT TQV
Sbjct:   153 YRVRKKFPLPRTIWDGEQKTHCFKERTRGLLREWYLQDPYPNPSKKRELAQATGLTPTQV 212

Query:   309 SNWFKNRRQRDR 320
              NWFKNRRQRDR
Sbjct:   213 GNWFKNRRQRDR 224

 Score = 264 (98.0 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
 Identities = 50/104 (48%), Positives = 70/104 (67%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQ--EAIRGQESVLRARAVVAYKR 61
             P ++F+ EQ+  +CE ++++GD ++L  FLWSLP  P   +AI   ES+ RARAVVAY  
Sbjct:    45 PTLNFSAEQVASVCETLEETGDIERLGRFLWSLPVAPGACDAINKHESIQRARAVVAYHT 104

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
              +F ELY ILE+H F    H +LQ +W+  HY+E  K+RGR LG
Sbjct:   105 GSFRELYHILETHKFTKDSHGKLQAMWLEAHYQEAEKLRGRPLG 148

 Score = 173 (66.0 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R  L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   177 ERTRGLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 231


>ZFIN|ZDB-GENE-040426-1282 [details] [associations]
            symbol:six6a "sine oculis-related homeobox 6a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-040426-1282
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00540000070251 HOGENOM:HOG000261680
            HSSP:P41778 HOVERGEN:HBG003609 OMA:TASMFQL OrthoDB:EOG4JQ3ZD
            EMBL:BX537123 EMBL:BC053123 IPI:IPI00484886 RefSeq:NP_957399.1
            UniGene:Dr.88317 Ensembl:ENSDART00000030646
            Ensembl:ENSDART00000111763 GeneID:394080 KEGG:dre:394080 CTD:394080
            InParanoid:Q7T3G8 NextBio:20815037 Uniprot:Q7T3G8
        Length = 245

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 105/180 (58%), Positives = 137/180 (76%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQEA-IRGQ-ESVLRARAVVAYKR 200
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P    + G+ ESVLRARAVVA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPSACDVLGKNESVLRARAVVAFHA 64

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               F ELY ILE+H F    HA+LQ LW+  HY+E  K+RGR LG VDKYR+RKKFPLP+T
Sbjct:    65 GNFRELYHILENHKFTKDSHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRT 124

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR
Sbjct:   125 IWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 184

 Score = 266 (98.7 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
 Identities = 53/104 (50%), Positives = 72/104 (69%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP--PQEA-IRGQ-ESVLRARAVVAYKR 61
             P ++F+P+Q+  +CE +++SGD ++L  FLWSLP  P    + G+ ESVLRARAVVA+  
Sbjct:     5 PILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPSACDVLGKNESVLRARAVVAFHA 64

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F ELY ILE+H F    HA+LQ LW+  HY+E  K+RGR LG
Sbjct:    65 GNFRELYHILENHKFTKDSHAKLQALWLEAHYQEAEKLRGRPLG 108

 Score = 174 (66.3 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
 Identities = 34/57 (59%), Positives = 44/57 (77%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   137 ERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAA--AKNR 191


>UNIPROTKB|F1NHV5 [details] [associations]
            symbol:SIX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
            evidence=IEA] [GO:0008582 "regulation of synaptic growth at
            neuromuscular junction" evidence=IEA] [GO:0032880 "regulation of
            protein localization" evidence=IEA] [GO:0042472 "inner ear
            morphogenesis" evidence=IEA] [GO:0043524 "negative regulation of
            neuron apoptotic process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0048699 "generation of neurons" evidence=IEA] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IEA]
            [GO:0051451 "myoblast migration" evidence=IEA] [GO:0072075
            "metanephric mesenchyme development" evidence=IEA] [GO:0072095
            "regulation of branch elongation involved in ureteric bud
            branching" evidence=IEA] [GO:0072107 "positive regulation of
            ureteric bud formation" evidence=IEA] [GO:0090190 "positive
            regulation of branching involved in ureteric bud morphogenesis"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0090190 GO:GO:0048856 GO:GO:0072107
            GeneTree:ENSGT00540000070251 GO:GO:0072095 GO:GO:0051451
            EMBL:AADN02003900 EMBL:AADN02003901 EMBL:AADN02003902
            EMBL:AADN02003903 IPI:IPI01017180 Ensembl:ENSGALT00000028076
            Uniprot:F1NHV5
        Length = 382

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 107/186 (57%), Positives = 136/186 (73%)

Query:   175 WSLPPQEAIRGQESVLRARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKE 234
             WSLPP E +RG ES+++ARA+VA+ +  + ELY+ILESHNFDS  H  LQ+LW +  Y E
Sbjct:     1 WSLPP-ERLRGNESLMKARALVAFHQGIYAELYSILESHNFDSSNHPLLQELWYKARYTE 59

Query:   235 HAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEK 294
               + RG+ LGAVDKYR+R+K+PLP+TIWDGEETVYCFKE+SRNALKE Y +NRYP+P EK
Sbjct:    60 AERARGKPLGAVDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEK 119

Query:   295 RQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRNALKECYDKNRYPNPD-EKRQLS 353
             R L++ITGL+LTQVSNWFKNRRQRDR P +   +   +      D++     D     LS
Sbjct:   120 RNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGQEDLSPHPLS 179

Query:   354 EITGLT 359
                G+T
Sbjct:   180 SSDGVT 185

 Score = 211 (79.3 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ 379
             ++SRNALKE Y +NRYP+P EKR L++ITGL+LTQVSNWFKNRRQRDR P +
Sbjct:    98 EKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSE 149

 Score = 202 (76.2 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
 Identities = 38/70 (54%), Positives = 51/70 (72%)

Query:    36 WSLPPQEAIRGQESVLRARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKE 95
             WSLPP E +RG ES+++ARA+VA+ +  + ELY+ILESHNFDS  H  LQ+LW +  Y E
Sbjct:     1 WSLPP-ERLRGNESLMKARALVAFHQGIYAELYSILESHNFDSSNHPLLQELWYKARYTE 59

Query:    96 HAKIRGRDLG 105
               + RG+ LG
Sbjct:    60 AERARGKPLG 69


>FB|FBgn0025360 [details] [associations]
            symbol:Optix "Optix" species:7227 "Drosophila melanogaster"
            [GO:0048749 "compound eye development" evidence=IEP;NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=ISS;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;NAS] [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0001745 "compound eye morphogenesis" evidence=IMP] [GO:0001751
            "compound eye photoreceptor cell differentiation" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 EMBL:AE013599 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0001751 eggNOG:NOG244436 GeneTree:ENSGT00540000070251
            EMBL:AF099184 EMBL:AY061077 EMBL:BT003802 EMBL:AF050132
            RefSeq:NP_524695.2 RefSeq:NP_724640.1 UniGene:Dm.3727
            ProteinModelPortal:Q95RW8 SMR:Q95RW8 IntAct:Q95RW8 STRING:Q95RW8
            PRIDE:Q95RW8 EnsemblMetazoa:FBtr0088865 GeneID:44108
            KEGG:dme:Dmel_CG18455 UCSC:CG18455-RA CTD:44108 FlyBase:FBgn0025360
            InParanoid:Q95RW8 OMA:HEILNCE OrthoDB:EOG4TTF0B PhylomeDB:Q95RW8
            GenomeRNAi:44108 NextBio:836771 Bgee:Q95RW8 GermOnline:CG18455
            Uniprot:Q95RW8
        Length = 487

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 104/194 (53%), Positives = 139/194 (71%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP---PQ-EAIRGQESVLRARAVVAYKR 200
             P ++F+  Q++ +C+ ++ SGD ++LA FLWSLP   P    I   E+VLRARAVVAY  
Sbjct:    33 PTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARAVVAYHV 92

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               F ELYAI+E+H F    + +LQ +W+  HY E  K+RGR LG VDKYR+RKKFPLP T
Sbjct:    93 GNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLGPVDKYRVRKKFPLPPT 152

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y ++ YPNP +KR+L++ TGL  TQV NWFKNRRQRDR
Sbjct:   153 IWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKNRRQRDR 212

Query:   321 TPQQRS-IQRSRNA 333
                 ++ IQ S+N+
Sbjct:   213 AAAAKNRIQHSQNS 226

 Score = 249 (92.7 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
 Identities = 49/104 (47%), Positives = 68/104 (65%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLP---PQ-EAIRGQESVLRARAVVAYKR 61
             P ++F+  Q++ +C+ ++ SGD ++LA FLWSLP   P    I   E+VLRARAVVAY  
Sbjct:    33 PTLAFSAAQVEIVCKTLEDSGDIERLARFLWSLPVALPNMHEILNCEAVLRARAVVAYHV 92

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
               F ELYAI+E+H F    + +LQ +W+  HY E  K+RGR LG
Sbjct:    93 GNFRELYAIIENHKFTKASYGKLQAMWLEAHYIEAEKLRGRSLG 136

 Score = 167 (63.8 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP +KR+L++ TGL  TQV NWFKNRRQRDR     AKNR
Sbjct:   165 ERTRSLLREWYLQDPYPNPTKKRELAKATGLNPTQVGNWFKNRRQRDRAAA--AKNR 219


>ZFIN|ZDB-GENE-990825-28 [details] [associations]
            symbol:six7 "sine oculis homeobox homolog 7"
            species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=IGI] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990825-28 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0048596 GeneTree:ENSGT00540000070251 HOGENOM:HOG000261680
            HSSP:P41778 HOVERGEN:HBG003609 EMBL:BX511131 EMBL:CT956071
            EMBL:AF030282 EMBL:BC064701 IPI:IPI00507152 RefSeq:NP_571429.1
            UniGene:Dr.75839 STRING:O93282 Ensembl:ENSDART00000102620
            GeneID:30625 KEGG:dre:30625 CTD:30625 eggNOG:NOG267619
            InParanoid:O93282 OMA:SHRFTRE OrthoDB:EOG4FTW1F NextBio:20806985
            Uniprot:O93282
        Length = 256

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 103/197 (52%), Positives = 138/197 (70%)

Query:   145 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ------EAIRGQESVLRARAVVAY 198
             P   FTPEQ+  +CE ++++GD ++L  FLWSLP        E +   ESV+RARA+VA+
Sbjct:     3 PLPMFTPEQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGELLNRHESVMRARALVAF 62

Query:   199 KRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLP 258
                 F  LY IL+SH F  + HA+LQ LW+  HY+E  ++RGR LG V+KYRIRKKFPLP
Sbjct:    63 HGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLGPVEKYRIRKKFPLP 122

Query:   259 KTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             +TIWDGE+  +CFKER+R+ L+E Y ++ YPNP  KR L++ TGLT TQV NWFKNRRQR
Sbjct:   123 RTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRRQR 182

Query:   319 DRTPQQRS-IQRSRNAL 334
             DR    ++ +Q+  + L
Sbjct:   183 DRAASAKNRLQQDSSLL 199

 Score = 248 (92.4 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
 Identities = 49/106 (46%), Positives = 68/106 (64%)

Query:     6 PNMSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQ------EAIRGQESVLRARAVVAY 59
             P   FTPEQ+  +CE ++++GD ++L  FLWSLP        E +   ESV+RARA+VA+
Sbjct:     3 PLPMFTPEQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGELLNRHESVMRARALVAF 62

Query:    60 KRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
                 F  LY IL+SH F  + HA+LQ LW+  HY+E  ++RGR LG
Sbjct:    63 HGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLG 108

 Score = 172 (65.6 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
 Identities = 34/57 (59%), Positives = 42/57 (73%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y ++ YPNP  KR L++ TGLT TQV NWFKNRRQRDR     AKNR
Sbjct:   137 ERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRRQRDRAAS--AKNR 191


>ZFIN|ZDB-GENE-990621-11 [details] [associations]
            symbol:six9 "sine oculis homeobox homolog 9"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-990621-11 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00540000070251 HOGENOM:HOG000261680 OMA:ERDEMRN
            HOVERGEN:HBG003609 OrthoDB:EOG4JQ3ZD EMBL:BX511193 EMBL:BC163024
            IPI:IPI00911412 RefSeq:NP_001124080.1 UniGene:Dr.155298
            UniGene:Dr.88607 Ensembl:ENSDART00000078064 GeneID:30623
            KEGG:dre:30623 CTD:30623 eggNOG:NOG267967 NextBio:20806984
            Uniprot:B3DI74
        Length = 235

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 108/187 (57%), Positives = 129/187 (68%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAI--------RGQESVLRARAVVAY 198
             M F+PEQ+ C+CE + QSG  D+L+ FL SLP             + QESVL+ARA VA+
Sbjct:     3 MGFSPEQVACVCEVLLQSGSMDRLSSFLCSLPSISTSSNMYMGFGQSQESVLKARAAVAF 62

Query:   199 KRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLP 258
                 F ELYA+LE + F  + H  LQQLW+R HY E    RGR LGAV KYRIR+KFPLP
Sbjct:    63 HHCRFTELYALLEGNVFSPRSHPLLQQLWLRAHYMEAELQRGRPLGAVGKYRIRRKFPLP 122

Query:   259 KTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             +TIWDGEET YCFKE+SR+ L+E Y +  YP+P EKR L+  TGLT TQVSNWFKNRRQR
Sbjct:   123 RTIWDGEETSYCFKEKSRSVLREWYCRKPYPSPREKRDLAAATGLTATQVSNWFKNRRQR 182

Query:   319 DRTPQQR 325
             DR    R
Sbjct:   183 DRAATSR 189

 Score = 233 (87.1 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
 Identities = 51/106 (48%), Positives = 64/106 (60%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAI--------RGQESVLRARAVVAY 59
             M F+PEQ+ C+CE + QSG  D+L+ FL SLP             + QESVL+ARA VA+
Sbjct:     3 MGFSPEQVACVCEVLLQSGSMDRLSSFLCSLPSISTSSNMYMGFGQSQESVLKARAAVAF 62

Query:    60 KRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
                 F ELYA+LE + F  + H  LQQLW+R HY E    RGR LG
Sbjct:    63 HHCRFTELYALLEGNVFSPRSHPLLQQLWLRAHYMEAELQRGRPLG 108

 Score = 170 (64.9 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
 Identities = 32/53 (60%), Positives = 39/53 (73%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQR 380
             ++SR+ L+E Y +  YP+P EKR L+  TGLT TQVSNWFKNRRQRDR    R
Sbjct:   137 EKSRSVLREWYCRKPYPSPREKRDLAAATGLTATQVSNWFKNRRQRDRAATSR 189


>WB|WBGene00000454 [details] [associations]
            symbol:ceh-33 species:6239 "Caenorhabditis elegans"
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00540000070251
            EMBL:FO080497 PIR:G89046 RefSeq:NP_504420.1 UniGene:Cel.4333
            ProteinModelPortal:Q94166 SMR:Q94166 DIP:DIP-25570N IntAct:Q94166
            MINT:MINT-1063809 EnsemblMetazoa:C10G8.7 GeneID:191622
            KEGG:cel:CELE_C10G8.7 UCSC:C10G8.7 CTD:191622 WormBase:C10G8.7
            eggNOG:NOG289502 HOGENOM:HOG000261680 InParanoid:Q94166 OMA:ERDEMRN
            NextBio:949714 Uniprot:Q94166
        Length = 261

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 94/172 (54%), Positives = 132/172 (76%)

Query:   149 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHELYA 208
             ++ EQ+ C+CEA+  S D  KL+ F+W++  ++ +R  + +L+A+A +A+  + F ELY 
Sbjct:    20 YSEEQVACICEAL--SNDARKLSQFVWTVLERDEMRNNQYILKAQAFLAFHSNNFKELYR 77

Query:   209 ILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKTIWDGEETV 268
             I+ESH+F S++H  LQ+ W+  HY E  KIRGR LGAV KYRIR+K+PLP+TIWDGEET 
Sbjct:    78 IIESHHFASEHHLPLQEWWLNAHYHEAEKIRGRQLGAVGKYRIRRKYPLPRTIWDGEETS 137

Query:   269 YCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             YCF+++SR  L++ Y +N YP+P EKR+L+E T LT+TQVSNWFKNRRQRDR
Sbjct:   138 YCFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDR 189

 Score = 230 (86.0 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
 Identities = 41/96 (42%), Positives = 66/96 (68%)

Query:    10 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHELYA 69
             ++ EQ+ C+CEA+  S D  KL+ F+W++  ++ +R  + +L+A+A +A+  + F ELY 
Sbjct:    20 YSEEQVACICEAL--SNDARKLSQFVWTVLERDEMRNNQYILKAQAFLAFHSNNFKELYR 77

Query:    70 ILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
             I+ESH+F S++H  LQ+ W+  HY E  KIRGR LG
Sbjct:    78 IIESHHFASEHHLPLQEWWLNAHYHEAEKIRGRQLG 113

 Score = 164 (62.8 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
 Identities = 31/47 (65%), Positives = 39/47 (82%)

Query:   329 RSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 375
             +SR  L++ Y +N YP+P EKR+L+E T LT+TQVSNWFKNRRQRDR
Sbjct:   143 KSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDR 189


>WB|WBGene00000453 [details] [associations]
            symbol:ceh-32 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;TAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0010171
            "body morphogenesis" evidence=IMP] [GO:0009886 "post-embryonic
            morphogenesis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0043565
            GO:GO:0010171 GO:GO:0040011 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 EMBL:AF325178 EMBL:Z77670 PIR:T26192
            RefSeq:NP_505958.1 UniGene:Cel.19327 ProteinModelPortal:Q23175
            SMR:Q23175 STRING:Q23175 PaxDb:Q23175 EnsemblMetazoa:W05E10.3.1
            EnsemblMetazoa:W05E10.3.2 GeneID:179603 KEGG:cel:CELE_W05E10.3
            UCSC:W05E10.3.1 CTD:179603 WormBase:W05E10.3 eggNOG:NOG244436
            GeneTree:ENSGT00540000070251 HOGENOM:HOG000022502 InParanoid:Q23175
            OMA:EMWHEAH NextBio:906114 GO:GO:0009886 Uniprot:Q23175
        Length = 439

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 96/188 (51%), Positives = 131/188 (69%)

Query:   144 NPNMS-FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEA--IRGQESVLRARAVVAYKR 200
             +P  S  T +QI   CE ++  GD D L  F+ ++PPQ+   + G E+ LRARA+V +  
Sbjct:    62 SPTTSNLTADQIVKTCEQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHA 121

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
               F ELYAILE++ F  KYH +LQ++W   HY+E  K RG+ L AVDKYR+RKK+P+P+T
Sbjct:   122 SHFRELYAILENNKFSPKYHPKLQEMWHEAHYREQEKNRGKSLCAVDKYRVRKKYPMPRT 181

Query:   261 IWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             IWDGE+  +CFKER+R+ L+E Y K+ YPNP +K++L+  TGLT  QV NWFKNRRQRDR
Sbjct:   182 IWDGEQKTHCFKERTRSLLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKNRRQRDR 241

Query:   321 TPQQRSIQ 328
                 ++ Q
Sbjct:   242 AAAAKNKQ 249

 Score = 226 (84.6 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
 Identities = 45/103 (43%), Positives = 64/103 (62%)

Query:     5 NPNMS-FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEA--IRGQESVLRARAVVAYKR 61
             +P  S  T +QI   CE ++  GD D L  F+ ++PPQ+   + G E+ LRARA+V +  
Sbjct:    62 SPTTSNLTADQIVKTCEQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHA 121

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDL 104
               F ELYAILE++ F  KYH +LQ++W   HY+E  K RG+ L
Sbjct:   122 SHFRELYAILENNKFSPKYHPKLQEMWHEAHYREQEKNRGKSL 164

 Score = 164 (62.8 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
 Identities = 32/57 (56%), Positives = 42/57 (73%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNR 384
             +R+R+ L+E Y K+ YPNP +K++L+  TGLT  QV NWFKNRRQRDR     AKN+
Sbjct:   194 ERTRSLLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKNRRQRDRAAA--AKNK 248


>WB|WBGene00000455 [details] [associations]
            symbol:ceh-34 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00540000070251
            EMBL:FO080497 HOGENOM:HOG000261680 PIR:F89046 RefSeq:NP_504419.1
            ProteinModelPortal:Q94165 SMR:Q94165 IntAct:Q94165 STRING:Q94165
            EnsemblMetazoa:C10G8.6 GeneID:178919 KEGG:cel:CELE_C10G8.6
            UCSC:C10G8.6 CTD:178919 WormBase:C10G8.6 eggNOG:NOG324871
            InParanoid:Q94165 OMA:VDSVHHH NextBio:903120 Uniprot:Q94165
        Length = 256

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 94/205 (45%), Positives = 134/205 (65%)

Query:   135 QEYLNMKKLNPNMSFTPEQIDCLCEAM----QQSGDFDKLAMFLWSLPPQEAIRGQESVL 190
             Q Y     L    S++ ++I C+CE++     Q+G  ++LA F+++LP  +  +  ESVL
Sbjct:     3 QSYNPQNSLTATTSYSEQEIVCICESLFNEGLQTGRTEQLANFIYNLP--QCYQVMESVL 60

Query:   191 RARAVVAYKRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYR 250
             +A+A+V +    +  LY +LE   F    H  LQ LW+  HYKE AK + R+LGAV KYR
Sbjct:    61 KAQALVYFTTQNWKMLYKLLECSKFSPHNHTVLQNLWLDAHYKEAAKTKDRELGAVCKYR 120

Query:   251 IRKKFPLPKTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSN 310
             IRKK P P TIWDGEET YCFK +SRN L++ Y K +YP+ ++KR+L++ T L++ QVSN
Sbjct:   121 IRKKNPFPNTIWDGEETNYCFKSKSRNVLRDAYKKCQYPSVEDKRRLAQQTELSIIQVSN 180

Query:   311 WFKNRRQRDRTPQQ--RSIQRSRNA 333
             WFKN+RQR+R   Q  RS  RS ++
Sbjct:   181 WFKNKRQRERAAGQLDRSSARSNDS 205

 Score = 180 (68.4 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
 Identities = 39/106 (36%), Positives = 63/106 (59%)

Query:     4 LNPNMSFTPEQIDCLCEAM----QQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAY 59
             L    S++ ++I C+CE++     Q+G  ++LA F+++LP  +  +  ESVL+A+A+V +
Sbjct:    11 LTATTSYSEQEIVCICESLFNEGLQTGRTEQLANFIYNLP--QCYQVMESVLKAQALVYF 68

Query:    60 KRHAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLG 105
                 +  LY +LE   F    H  LQ LW+  HYKE AK + R+LG
Sbjct:    69 TTQNWKMLYKLLECSKFSPHNHTVLQNLWLDAHYKEAAKTKDRELG 114

 Score = 150 (57.9 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
 Identities = 29/61 (47%), Positives = 45/61 (73%)

Query:   329 RSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQ--RAKNRTF 386
             +SRN L++ Y K +YP+ ++KR+L++ T L++ QVSNWFKN+RQR+R   Q  R+  R+ 
Sbjct:   144 KSRNVLRDAYKKCQYPSVEDKRRLAQQTELSIIQVSNWFKNKRQRERAAGQLDRSSARSN 203

Query:   387 D 387
             D
Sbjct:   204 D 204


>RGD|1305040 [details] [associations]
            symbol:Six5 "SIX homeobox 5" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            RGD:1305040 GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0007286
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0002088 GeneTree:ENSGT00540000070251 OrthoDB:EOG4FN4K6
            IPI:IPI00367006 Ensembl:ENSRNOT00000020597 UCSC:RGD:1305040
            Uniprot:D3ZUS2
        Length = 691

 Score = 235 (87.8 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
 Identities = 44/93 (47%), Positives = 65/93 (69%)

Query:     8 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 67
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    76 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 135

Query:    68 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIR 100
             Y +LES  F + +HA LQ L++R  Y E  + R
Sbjct:   136 YQLLESRPFPAAHHAFLQDLYLRARYHEAGRAR 168

 Score = 235 (87.8 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
 Identities = 44/93 (47%), Positives = 65/93 (69%)

Query:   147 MSFTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESVLRARAVVAYKRHAFHEL 206
             + F+PEQ+ C+CEA+ Q+G   +L+ FL +LPP E +RG + VLRARA+VA++R  + EL
Sbjct:    76 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAEL 135

Query:   207 YAILESHNFDSKYHAELQQLWMRGHYKEHAKIR 239
             Y +LES  F + +HA LQ L++R  Y E  + R
Sbjct:   136 YQLLESRPFPAAHHAFLQDLYLRARYHEAGRAR 168

 Score = 214 (80.4 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
 Identities = 40/50 (80%), Positives = 44/50 (88%)

Query:   272 KERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 321
             KERSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   172 KERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 221

 Score = 206 (77.6 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
             +RSR ALK CY  NRYP PDEKR+L+ +TGL+LTQVSNWFKNRRQRDRT
Sbjct:   173 ERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRT 221


>WB|WBGene00006775 [details] [associations]
            symbol:unc-39 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0018991 "oviposition" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0007411
            "axon guidance" evidence=IMP] [GO:0016477 "cell migration"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0008078
            "mesodermal cell migration" evidence=IMP] [GO:0001764 "neuron
            migration" evidence=IMP] [GO:0030334 "regulation of cell migration"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009792 GO:GO:0018991
            GO:GO:0007411 GO:GO:0001764 GO:GO:0002119 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
            GO:GO:0008078 GeneTree:ENSGT00540000070251 EMBL:Z81551 PIR:T22761
            RefSeq:NP_506563.2 UniGene:Cel.4331 ProteinModelPortal:O17894
            SMR:O17894 DIP:DIP-24571N IntAct:O17894 MINT:MINT-1065909
            STRING:O17894 EnsemblMetazoa:F56A12.1 GeneID:191623
            KEGG:cel:CELE_F56A12.1 UCSC:F56A12.1 CTD:191623 WormBase:F56A12.1
            eggNOG:NOG257777 HOGENOM:HOG000017560 InParanoid:O17894 OMA:ARYKESQ
            NextBio:949718 Uniprot:O17894
        Length = 335

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 73/182 (40%), Positives = 116/182 (63%)

Query:   149 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESV--LRARAVVA------YKR 200
             ++ EQ++ +  ++ Q+ D D+L  F   L   E++ G  +V  LR+ A++       Y  
Sbjct:    97 YSMEQMEAISTSLFQARDGDRLVAFFKQL---ESLYGPNAVDHLRSEAIIVAYTYALYHS 153

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
             + F  L+ +L + +F  +++ +LQ +W    YKE    RG++L  V+KYR+R+KFP PKT
Sbjct:   154 NEFETLFHLLSNRHFQQRHYNDLQDIWHHARYKESQLKRGKELNPVEKYRLRRKFPAPKT 213

Query:   261 IWDGEETVYCFKERSRNALKECY-DKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD 319
             IWDGEE VY FK+ SR  LK+ + + + YP  ++KR++S  TGL + Q+SNWFKNRRQRD
Sbjct:   214 IWDGEEIVYSFKDSSRKFLKQFFRNVSEYPTQEQKREISRATGLKIVQISNWFKNRRQRD 273

Query:   320 RT 321
             ++
Sbjct:   274 KS 275

 Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 36/109 (33%), Positives = 59/109 (54%)

Query:   271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR-DRTPQQRSIQ- 328
             F++R  N L++ +   RY     KR   E+  +   ++   F   +   D      S + 
Sbjct:   168 FQQRHYNDLQDIWHHARYKESQLKRG-KELNPVEKYRLRRKFPAPKTIWDGEEIVYSFKD 226

Query:   329 RSRNALKECY-DKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
              SR  LK+ + + + YP  ++KR++S  TGL + Q+SNWFKNRRQRD++
Sbjct:   227 SSRKFLKQFFRNVSEYPTQEQKREISRATGLKIVQISNWFKNRRQRDKS 275

 Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
 Identities = 28/103 (27%), Positives = 55/103 (53%)

Query:    10 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESV--LRARAVVA------YKR 61
             ++ EQ++ +  ++ Q+ D D+L  F   L   E++ G  +V  LR+ A++       Y  
Sbjct:    97 YSMEQMEAISTSLFQARDGDRLVAFFKQL---ESLYGPNAVDHLRSEAIIVAYTYALYHS 153

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDL 104
             + F  L+ +L + +F  +++ +LQ +W    YKE    RG++L
Sbjct:   154 NEFETLFHLLSNRHFQQRHYNDLQDIWHHARYKESQLKRGKEL 196


>UNIPROTKB|O17894 [details] [associations]
            symbol:unc-39 "Protein UNC-39" species:6239 "Caenorhabditis
            elegans" [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009792 GO:GO:0018991 GO:GO:0007411
            GO:GO:0001764 GO:GO:0002119 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334 GO:GO:0008078
            GeneTree:ENSGT00540000070251 EMBL:Z81551 PIR:T22761
            RefSeq:NP_506563.2 UniGene:Cel.4331 ProteinModelPortal:O17894
            SMR:O17894 DIP:DIP-24571N IntAct:O17894 MINT:MINT-1065909
            STRING:O17894 EnsemblMetazoa:F56A12.1 GeneID:191623
            KEGG:cel:CELE_F56A12.1 UCSC:F56A12.1 CTD:191623 WormBase:F56A12.1
            eggNOG:NOG257777 HOGENOM:HOG000017560 InParanoid:O17894 OMA:ARYKESQ
            NextBio:949718 Uniprot:O17894
        Length = 335

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 73/182 (40%), Positives = 116/182 (63%)

Query:   149 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESV--LRARAVVA------YKR 200
             ++ EQ++ +  ++ Q+ D D+L  F   L   E++ G  +V  LR+ A++       Y  
Sbjct:    97 YSMEQMEAISTSLFQARDGDRLVAFFKQL---ESLYGPNAVDHLRSEAIIVAYTYALYHS 153

Query:   201 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDLGAVDKYRIRKKFPLPKT 260
             + F  L+ +L + +F  +++ +LQ +W    YKE    RG++L  V+KYR+R+KFP PKT
Sbjct:   154 NEFETLFHLLSNRHFQQRHYNDLQDIWHHARYKESQLKRGKELNPVEKYRLRRKFPAPKT 213

Query:   261 IWDGEETVYCFKERSRNALKECY-DKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD 319
             IWDGEE VY FK+ SR  LK+ + + + YP  ++KR++S  TGL + Q+SNWFKNRRQRD
Sbjct:   214 IWDGEEIVYSFKDSSRKFLKQFFRNVSEYPTQEQKREISRATGLKIVQISNWFKNRRQRD 273

Query:   320 RT 321
             ++
Sbjct:   274 KS 275

 Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 36/109 (33%), Positives = 59/109 (54%)

Query:   271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR-DRTPQQRSIQ- 328
             F++R  N L++ +   RY     KR   E+  +   ++   F   +   D      S + 
Sbjct:   168 FQQRHYNDLQDIWHHARYKESQLKRG-KELNPVEKYRLRRKFPAPKTIWDGEEIVYSFKD 226

Query:   329 RSRNALKECY-DKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
              SR  LK+ + + + YP  ++KR++S  TGL + Q+SNWFKNRRQRD++
Sbjct:   227 SSRKFLKQFFRNVSEYPTQEQKREISRATGLKIVQISNWFKNRRQRDKS 275

 Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
 Identities = 28/103 (27%), Positives = 55/103 (53%)

Query:    10 FTPEQIDCLCEAMQQSGDFDKLAMFLWSLPPQEAIRGQESV--LRARAVVA------YKR 61
             ++ EQ++ +  ++ Q+ D D+L  F   L   E++ G  +V  LR+ A++       Y  
Sbjct:    97 YSMEQMEAISTSLFQARDGDRLVAFFKQL---ESLYGPNAVDHLRSEAIIVAYTYALYHS 153

Query:    62 HAFHELYAILESHNFDSKYHAELQQLWMRGHYKEHAKIRGRDL 104
             + F  L+ +L + +F  +++ +LQ +W    YKE    RG++L
Sbjct:   154 NEFETLFHLLSNRHFQQRHYNDLQDIWHHARYKESQLKRGKEL 196


>WB|WBGene00008195 [details] [associations]
            symbol:ceh-88 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:Z82264
            GeneTree:ENSGT00530000068111 PIR:T20054 RefSeq:NP_503081.2
            UniGene:Cel.13289 ProteinModelPortal:Q9XUG3 SMR:Q9XUG3
            EnsemblMetazoa:C49C3.5 GeneID:178514 KEGG:cel:CELE_C49C3.5
            UCSC:C49C3.5 CTD:178514 WormBase:C49C3.5 eggNOG:NOG312737
            HOGENOM:HOG000015984 InParanoid:Q9XUG3 OMA:FCNQRRK NextBio:901438
            Uniprot:Q9XUG3
        Length = 262

 Score = 120 (47.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 33/94 (35%), Positives = 50/94 (53%)

Query:   250 RIRKKFPLP-KTIWDGEETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQV 308
             R+RKK     K +    + +Y F    R AL + +      + D  R+LSEITGLT+ Q+
Sbjct:    66 RLRKKDERAGKYVPPPPKQMYEFTSEQRGALDQAFLVTPQMDSDGARELSEITGLTVKQI 125

Query:   309 SNWFKN-RRQRDRTPQQRSIQRSRNALKECYDKN 341
             +NWF N RR+ D    ++  +R R  ++E   KN
Sbjct:   126 NNWFCNQRRKADGRSAEKDKKR-RERIREDMKKN 158

 Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query:   351 QLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKN-RTFDP 388
             +L E TG+   ++ +WF  R+ RD+   +  +N R   P
Sbjct:   198 ELVEKTGMERKKIRDWFSKRKGRDKRFLENMENTREVSP 236


>UNIPROTKB|O43812 [details] [associations]
            symbol:DUX1 "Double homeobox protein 1" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=TAS]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0000976
            HSSP:P06601 EMBL:AJ001481 IPI:IPI00472029 RefSeq:NP_036278.1
            UniGene:Hs.274469 ProteinModelPortal:O43812 SMR:O43812 PRIDE:O43812
            DNASU:26584 GeneID:26584 KEGG:hsa:26584 CTD:26581 CTD:26584
            GeneCards:GC10U901220 HGNC:HGNC:3079 MIM:611441 neXtProt:NX_O43812
            PharmGKB:PA27535 HOVERGEN:HBG081466 GenomeRNAi:26584 NextBio:48948
            CleanEx:HS_DUX1 Genevestigator:O43812 Uniprot:O43812
        Length = 170

 Score = 94 (38.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query:   311 WFKNRRQRDRTPQQRS-IQRSRNALK-ECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFK 368
             W   RR   +  ++R+ I  S+ AL    ++K+R+P    + +L+  TGL  +++  WF+
Sbjct:    85 W-PGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQ 143

Query:   369 NRRQRDRTPQQRA 381
             NRR R R    RA
Sbjct:   144 NRRARHRGQSGRA 156

 Score = 74 (31.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
 Identities = 13/40 (32%), Positives = 24/40 (60%)

Query:   277 NALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR 316
             +AL+ C+++N YP    K +L++   +   +V  WF+N R
Sbjct:    32 DALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNER 71


>UNIPROTKB|D4A2Z5 [details] [associations]
            symbol:RGD1563833 "Protein RGD1563833" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 OrthoDB:EOG4N04FW
            IPI:IPI00947646 Ensembl:ENSRNOT00000066263 Uniprot:D4A2Z5
        Length = 150

 Score = 93 (37.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query:   320 RTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             R P+ R   + R  L + +++N  P  D + QL + TGL    +  WF+NRR R
Sbjct:    97 RRPRTRLNLQQRRILVQAFERNPLPGFDTREQLGQRTGLNEDTIHIWFQNRRAR 150

 Score = 70 (29.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
 Identities = 13/43 (30%), Positives = 27/43 (62%)

Query:   276 RNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             + AL   + KN+YP+  ++++L+    L  +++  WF+N+R R
Sbjct:    28 KKALLSAFIKNQYPSYWDRQELAMQIQLPASRIRVWFQNQRSR 70


>UNIPROTKB|Q96PT3 [details] [associations]
            symbol:DUX5 "Double homeobox protein 5" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06601
            IPI:IPI00472029 RefSeq:NP_036278.1 UniGene:Hs.274469 DNASU:26584
            GeneID:26584 KEGG:hsa:26584 CTD:26581 CTD:26584 PharmGKB:PA27535
            HOVERGEN:HBG081466 EMBL:AF133131 IPI:IPI00790770 RefSeq:NP_036281.2
            ProteinModelPortal:Q96PT3 SMR:Q96PT3 DMDM:74717113 PRIDE:Q96PT3
            DNASU:26581 GeneID:26581 KEGG:hsa:26581 GeneCards:GC00U990581
            HGNC:HGNC:3083 MIM:611444 neXtProt:NX_Q96PT3 PharmGKB:PA27539
            NextBio:48938 Genevestigator:Q96PT3 Uniprot:Q96PT3
        Length = 197

 Score = 94 (38.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query:   311 WFKNRRQRDRTPQQRS-IQRSRNALK-ECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFK 368
             W   RR   +  ++R+ I  S+ AL    ++K+R+P    + +L+  TGL  +++  WF+
Sbjct:   112 W-PGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQ 170

Query:   369 NRRQRDRTPQQRA 381
             NRR R R    RA
Sbjct:   171 NRRARHRGQSGRA 183

 Score = 74 (31.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
 Identities = 13/40 (32%), Positives = 24/40 (60%)

Query:   277 NALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR 316
             +AL+ C+++N YP    K +L++   +   +V  WF+N R
Sbjct:    59 DALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNER 98


>UNIPROTKB|E9PC25 [details] [associations]
            symbol:MEIS1 "Homeobox protein Meis1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AC007392 EMBL:AC092669 EMBL:AC093641 HGNC:HGNC:7000
            ChiTaRS:MEIS1 IPI:IPI00917508 ProteinModelPortal:E9PC25 SMR:E9PC25
            Ensembl:ENST00000409517 ArrayExpress:E9PC25 Bgee:E9PC25
            Uniprot:E9PC25
        Length = 140

 Score = 111 (44.1 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 23/54 (42%), Positives = 34/54 (62%)

Query:   340 KNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTFD---PYS 390
             K+ YP+ ++K+QL++ TGLT+ QV+NWF N R+R   P     NR      PY+
Sbjct:    46 KHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGTPYN 99

 Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 22/52 (42%), Positives = 35/52 (67%)

Query:   285 KNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRNALKE 336
             K+ YP+ ++K+QL++ TGLT+ QV+NWF N R+R   P    I +S  A+ +
Sbjct:    46 KHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPM---IDQSNRAVSQ 94


>UNIPROTKB|E2QZ93 [details] [associations]
            symbol:E2QZ93 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR008422
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF05920 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            Ensembl:ENSCAFT00000009502 Uniprot:E2QZ93
        Length = 377

 Score = 132 (51.5 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 40/107 (37%), Positives = 51/107 (47%)

Query:   222 ELQQLWMRGHYKEHAKIRGR-DLGAVDKYRIRKKFPLPKTIWDGEETVYCFKERSRNALK 280
             EL QLW   HY+   K  G   L  V K+R RK+ P P ++  G      F    R  L 
Sbjct:    93 ELVQLWNDIHYRLVMKRLGVVALTPVQKFRCRKRNPPPPSLCPGGLKSRNFPREVRQKLH 152

Query:   281 ECYDKNRYPNPD--EKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQR 325
             + +     PNP   E+  L+  T LT+ QV NWF N R+R R   QR
Sbjct:   153 D-FASGVSPNPSKVEREHLALETSLTVEQVYNWFANYRRRQRALVQR 198


>UNIPROTKB|F6XTX4 [details] [associations]
            symbol:ANHX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR008422
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF05920 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:RNFPREV
            GeneTree:ENSGT00390000013263 Ensembl:ENSCAFT00000009502
            EMBL:AAEX03014568 Uniprot:F6XTX4
        Length = 378

 Score = 132 (51.5 bits), Expect = 9.6e-06, P = 9.6e-06
 Identities = 40/107 (37%), Positives = 51/107 (47%)

Query:   222 ELQQLWMRGHYKEHAKIRGR-DLGAVDKYRIRKKFPLPKTIWDGEETVYCFKERSRNALK 280
             EL QLW   HY+   K  G   L  V K+R RK+ P P ++  G      F    R  L 
Sbjct:    93 ELVQLWNDIHYRLVMKRLGVVALTPVQKFRCRKRNPPPPSLCPGGLKSRNFPREVRQKLH 152

Query:   281 ECYDKNRYPNPD--EKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQR 325
             + +     PNP   E+  L+  T LT+ QV NWF N R+R R   QR
Sbjct:   153 D-FASGVSPNPSKVEREHLALETSLTVEQVYNWFANYRRRQRALVQR 198


>UNIPROTKB|F1NQQ8 [details] [associations]
            symbol:IRX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00550000074365
            EMBL:AADN02008203 EMBL:AADN02008204 EMBL:AADN02008205
            EMBL:AADN02008206 EMBL:AADN02008207 EMBL:AADN02008208
            EMBL:AADN02008209 EMBL:AADN02008210 EMBL:AADN02008211
            IPI:IPI00820900 Ensembl:ENSGALT00000036980 Uniprot:F1NQQ8
        Length = 129

 Score = 109 (43.4 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 29/80 (36%), Positives = 43/80 (53%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR-------TPQQRSIQRSR 331
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R +        P+ ++    R
Sbjct:    16 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKTKNEER 74

Query:   332 NALKECYDKNRYPNPDEKRQ 351
                K+  +K R    ++KR+
Sbjct:    75 EKEKKRKEKKRMKRKEKKRK 94

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    16 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 54


>UNIPROTKB|Q96PT4 [details] [associations]
            symbol:DUX3 "Putative double homeobox protein 3"
            species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06601 HOVERGEN:HBG081466
            EMBL:AF133130 IPI:IPI00479106 IPI:IPI00796276 RefSeq:NP_036280.2
            ProteinModelPortal:Q96PT4 SMR:Q96PT4 DMDM:74717114 PRIDE:Q96PT4
            DNASU:26582 GeneID:26582 KEGG:hsa:26582 CTD:26582
            GeneCards:GC00U990582 HGNC:HGNC:3081 MIM:611443 neXtProt:NX_Q96PT4
            PharmGKB:PA27537 GenomeRNAi:26582 NextBio:48942
            Genevestigator:Q96PT4 Uniprot:Q96PT4
        Length = 197

 Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
 Identities = 21/65 (32%), Positives = 37/65 (56%)

Query:   311 WFKNRRQRDRTPQQRS-IQRSRNALK-ECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFK 368
             W   RR   +  ++R+ I  S+ AL    ++K+R+P    + +L+  TGL  +++  WF+
Sbjct:   112 W-PGRRDPQKGRRKRTAITGSQTALLLRAFEKDRFPGIPAREELARETGLPESRIQLWFQ 170

Query:   369 NRRQR 373
             NRR R
Sbjct:   171 NRRAR 175

 Score = 77 (32.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query:   277 NALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR 316
             +AL+ C+++N YP    K QL++   +   +V  WF+N R
Sbjct:    59 DALRACFERNLYPGIATKEQLAQGIDIPEPRVQIWFQNER 98


>WB|WBGene00000450 [details] [associations]
            symbol:ceh-28 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISS] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0034243 "regulation of transcription elongation from RNA
            polymerase II promoter" evidence=ISS] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=ISS] [GO:0050807 "regulation of synapse
            organization" evidence=IMP] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
            GO:GO:0000976 GO:GO:0050807 GO:GO:0034243
            GeneTree:ENSGT00700000104129 KO:K09352 EMBL:Z77133 EMBL:AY205144
            RefSeq:NP_510169.4 UniGene:Cel.11118 ProteinModelPortal:G5EE18
            SMR:G5EE18 EnsemblMetazoa:K03A11.3 GeneID:191619
            KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3 OMA:NPMFASA
            NextBio:949702 Uniprot:G5EE18
        Length = 201

 Score = 119 (46.9 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 25/62 (40%), Positives = 37/62 (59%)

Query:   271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR-DRTPQQRSIQR 329
             F +   N L+E + K RY    E+ +L++  GLT TQV  WF+NRR +  R  Q R++Q 
Sbjct:   111 FTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCKRLAQDRTLQL 170

Query:   330 SR 331
             S+
Sbjct:   171 SQ 172

 Score = 119 (46.9 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query:   316 RQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR-D 374
             +Q+ R P+    Q   N L+E + K RY    E+ +L++  GLT TQV  WF+NRR +  
Sbjct:   101 QQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCK 160

Query:   375 RTPQQRAKNRTFDPYS 390
             R  Q R    +  P++
Sbjct:   161 RLAQDRTLQLSQIPFN 176


>UNIPROTKB|G5EE18 [details] [associations]
            symbol:ceh-28 "NK-2 family homeodomain protein CEH-28"
            species:6239 "Caenorhabditis elegans" [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=ISS] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0000976
            GO:GO:0050807 GO:GO:0034243 GeneTree:ENSGT00700000104129 KO:K09352
            EMBL:Z77133 EMBL:AY205144 RefSeq:NP_510169.4 UniGene:Cel.11118
            ProteinModelPortal:G5EE18 SMR:G5EE18 EnsemblMetazoa:K03A11.3
            GeneID:191619 KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3
            OMA:NPMFASA NextBio:949702 Uniprot:G5EE18
        Length = 201

 Score = 119 (46.9 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 25/62 (40%), Positives = 37/62 (59%)

Query:   271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR-DRTPQQRSIQR 329
             F +   N L+E + K RY    E+ +L++  GLT TQV  WF+NRR +  R  Q R++Q 
Sbjct:   111 FTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCKRLAQDRTLQL 170

Query:   330 SR 331
             S+
Sbjct:   171 SQ 172

 Score = 119 (46.9 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query:   316 RQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR-D 374
             +Q+ R P+    Q   N L+E + K RY    E+ +L++  GLT TQV  WF+NRR +  
Sbjct:   101 QQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCK 160

Query:   375 RTPQQRAKNRTFDPYS 390
             R  Q R    +  P++
Sbjct:   161 RLAQDRTLQLSQIPFN 176


>UNIPROTKB|F8VW34 [details] [associations]
            symbol:TGIF1 "Homeobox protein TGIF1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001843 "neural tube closure" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0007368 "determination of
            left/right symmetry" evidence=IEA] [GO:0008285 "negative regulation
            of cell proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=IEA] [GO:0010470 "regulation of
            gastrulation" evidence=IEA] [GO:0038092 "nodal signaling pathway"
            evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0048146 "positive regulation of fibroblast
            proliferation" evidence=IEA] [GO:0048387 "negative regulation of
            retinoic acid receptor signaling pathway" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0070410
            "co-SMAD binding" evidence=IEA] [GO:0071363 "cellular response to
            growth factor stimulus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR008422
            InterPro:IPR009057 Pfam:PF05920 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0008285 GO:GO:0071363 GO:GO:0042493
            GO:GO:0043565 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007368
            GO:GO:0045666 GO:GO:0001843 GO:GO:0009953 GO:GO:0048387
            GO:GO:0048146 EMBL:AP001025 HGNC:HGNC:11776 IPI:IPI01020738
            ProteinModelPortal:F8VW34 SMR:F8VW34 Ensembl:ENST00000550958
            ArrayExpress:F8VW34 Bgee:F8VW34 Uniprot:F8VW34
        Length = 131

 Score = 104 (41.7 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 26/59 (44%), Positives = 36/59 (61%)

Query:   315 RRQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             RR+R   P++ S+Q  R+ L E +  N YP+  EK  LS+ T L+  QV NWF N R+R
Sbjct:    16 RRRRGNLPKE-SVQILRDWLYE-HRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72


>UNIPROTKB|F8VX54 [details] [associations]
            symbol:TGIF1 "Homeobox protein TGIF1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001843 "neural tube closure" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0007368 "determination of
            left/right symmetry" evidence=IEA] [GO:0008285 "negative regulation
            of cell proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=IEA] [GO:0010470 "regulation of
            gastrulation" evidence=IEA] [GO:0038092 "nodal signaling pathway"
            evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0048146 "positive regulation of fibroblast
            proliferation" evidence=IEA] [GO:0048387 "negative regulation of
            retinoic acid receptor signaling pathway" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0070410
            "co-SMAD binding" evidence=IEA] [GO:0071363 "cellular response to
            growth factor stimulus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR008422
            InterPro:IPR009057 Pfam:PF05920 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0008285 GO:GO:0071363 GO:GO:0042493
            GO:GO:0043565 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007368
            GO:GO:0045666 GO:GO:0001843 GO:GO:0009953 GO:GO:0048387
            GO:GO:0048146 EMBL:AP001025 HGNC:HGNC:11776 IPI:IPI01022819
            ProteinModelPortal:F8VX54 SMR:F8VX54 Ensembl:ENST00000549468
            ArrayExpress:F8VX54 Bgee:F8VX54 Uniprot:F8VX54
        Length = 133

 Score = 104 (41.7 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 26/59 (44%), Positives = 36/59 (61%)

Query:   315 RRQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             RR+R   P++ S+Q  R+ L E +  N YP+  EK  LS+ T L+  QV NWF N R+R
Sbjct:    16 RRRRGNLPKE-SVQILRDWLYE-HRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72


>UNIPROTKB|F8VXG3 [details] [associations]
            symbol:TGIF1 "Homeobox protein TGIF1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001843 "neural tube closure" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0007368 "determination of
            left/right symmetry" evidence=IEA] [GO:0008285 "negative regulation
            of cell proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=IEA] [GO:0010470 "regulation of
            gastrulation" evidence=IEA] [GO:0038092 "nodal signaling pathway"
            evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0048146 "positive regulation of fibroblast
            proliferation" evidence=IEA] [GO:0048387 "negative regulation of
            retinoic acid receptor signaling pathway" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0070410
            "co-SMAD binding" evidence=IEA] [GO:0071363 "cellular response to
            growth factor stimulus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR008422
            InterPro:IPR009057 Pfam:PF05920 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0008285 GO:GO:0071363 GO:GO:0042493
            GO:GO:0043565 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007368
            GO:GO:0045666 GO:GO:0001843 GO:GO:0009953 GO:GO:0048387
            GO:GO:0048146 EMBL:AP001025 HGNC:HGNC:11776 IPI:IPI01022663
            Ensembl:ENST00000549253 Bgee:F8VXG3 Uniprot:F8VXG3
        Length = 92

 Score = 104 (41.7 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 26/59 (44%), Positives = 36/59 (61%)

Query:   315 RRQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             RR+R   P++ S+Q  R+ L E +  N YP+  EK  LS+ T L+  QV NWF N R+R
Sbjct:    16 RRRRGNLPKE-SVQILRDWLYE-HRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72


>UNIPROTKB|F8VYL4 [details] [associations]
            symbol:TGIF1 "Homeobox protein TGIF1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AP001025 HGNC:HGNC:11776 IPI:IPI01021438
            ProteinModelPortal:F8VYL4 SMR:F8VYL4 Ensembl:ENST00000546979
            ArrayExpress:F8VYL4 Bgee:F8VYL4 Uniprot:F8VYL4
        Length = 118

 Score = 104 (41.7 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 26/59 (44%), Positives = 36/59 (61%)

Query:   315 RRQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             RR+R   P++ S+Q  R+ L E +  N YP+  EK  LS+ T L+  QV NWF N R+R
Sbjct:    36 RRRRGNLPKE-SVQILRDWLYE-HRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92


>UNIPROTKB|F8VZH2 [details] [associations]
            symbol:TGIF1 "Homeobox protein TGIF1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001843 "neural tube closure" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0007368 "determination of
            left/right symmetry" evidence=IEA] [GO:0008285 "negative regulation
            of cell proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=IEA] [GO:0010470 "regulation of
            gastrulation" evidence=IEA] [GO:0038092 "nodal signaling pathway"
            evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0048146 "positive regulation of fibroblast
            proliferation" evidence=IEA] [GO:0048387 "negative regulation of
            retinoic acid receptor signaling pathway" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0070410
            "co-SMAD binding" evidence=IEA] [GO:0071363 "cellular response to
            growth factor stimulus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR008422
            InterPro:IPR009057 Pfam:PF05920 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0008285 GO:GO:0071363 GO:GO:0042493
            GO:GO:0043565 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007368
            GO:GO:0045666 GO:GO:0001843 GO:GO:0009953 GO:GO:0048387
            GO:GO:0048146 EMBL:AP001025 HGNC:HGNC:11776 IPI:IPI01022090
            ProteinModelPortal:F8VZH2 SMR:F8VZH2 Ensembl:ENST00000551333
            ArrayExpress:F8VZH2 Bgee:F8VZH2 Uniprot:F8VZH2
        Length = 138

 Score = 104 (41.7 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 26/59 (44%), Positives = 36/59 (61%)

Query:   315 RRQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             RR+R   P++ S+Q  R+ L E +  N YP+  EK  LS+ T L+  QV NWF N R+R
Sbjct:    16 RRRRGNLPKE-SVQILRDWLYE-HRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72


>UNIPROTKB|F1LTM6 [details] [associations]
            symbol:F1LTM6 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00558159
            Ensembl:ENSRNOT00000047637 OMA:GRTNTRA Uniprot:F1LTM6
        Length = 140

 Score = 104 (41.7 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 29/85 (34%), Positives = 41/85 (48%)

Query:   301 TGLTLTQVS----NWFKNRRQRD-RTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEI 355
             TG T T+ S    NW  +    D R P+ R   + R  L + +++N  P    + QL + 
Sbjct:    45 TGRTNTRASGTGRNWPGSSMPSDSRRPRTRLNLQQRRILVQAFERNPLPGFATREQLGQR 104

Query:   356 TGLTLTQVSNWFKNRRQRD-RTPQQ 379
             TGL    +  WF+NRR R  R P Q
Sbjct:   105 TGLNEDTIHIWFQNRRARQARAPDQ 129


>CGD|CAL0003187 [details] [associations]
            symbol:MTLA1 species:5476 "Candida albicans" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS;IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0007531 "mating
            type determination" evidence=IGI] [GO:0009405 "pathogenesis"
            evidence=IMP] [GO:0031138 "negative regulation of conjugation with
            cellular fusion" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007532
            "regulation of mating-type specific transcription, DNA-dependent"
            evidence=IEA] [GO:0036166 "phenotypic switching" evidence=IMP]
            [GO:1900239 "regulation of phenotypic switching" evidence=IMP]
            [GO:0003714 "transcription corepressor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009405
            GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 EMBL:AACQ01000100
            GO:GO:1900239 GO:GO:0036166 GO:GO:0031138 EMBL:AF167162
            RefSeq:XP_714617.1 STRING:Q9UW23 GeneID:3643729 KEGG:cal:CaO19.3201
            eggNOG:NOG18819 GO:GO:0007531 Uniprot:Q9UW23
        Length = 210

 Score = 119 (46.9 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 20/67 (29%), Positives = 43/67 (64%)

Query:   317 QRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
             ++ +  +QR    ++  L++ ++KN+ PN  E+  ++E  G++L+Q+  WF N+R R + 
Sbjct:   139 KKSKKKRQRLDNSTKEFLEKVFEKNKQPNRRERELIAEKHGVSLSQIRVWFTNKRMRKKE 198

Query:   377 PQQRAKN 383
             P+ +AK+
Sbjct:   199 PKSKAKS 205

 Score = 109 (43.4 bits), Expect = 0.00093, P = 0.00093
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query:   264 GEETVYCFKERSR--NALKE----CYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQ 317
             GEE     K+R R  N+ KE     ++KN+ PN  E+  ++E  G++L+Q+  WF N+R 
Sbjct:   135 GEEIKKSKKKRQRLDNSTKEFLEKVFEKNKQPNRRERELIAEKHGVSLSQIRVWFTNKRM 194

Query:   318 RDRTPQQRSIQRSRN 332
             R + P+ ++   S +
Sbjct:   195 RKKEPKSKAKSSSNS 209


>UNIPROTKB|Q9UW23 [details] [associations]
            symbol:MTLA1 "Mating-type-like protein A1" species:237561
            "Candida albicans SC5314" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS;IMP] [GO:0007531 "mating type determination"
            evidence=IGI] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0031138
            "negative regulation of conjugation with cellular fusion"
            evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
            [GO:1900239 "regulation of phenotypic switching" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009405
            GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 EMBL:AACQ01000100
            GO:GO:1900239 GO:GO:0036166 GO:GO:0031138 EMBL:AF167162
            RefSeq:XP_714617.1 STRING:Q9UW23 GeneID:3643729 KEGG:cal:CaO19.3201
            eggNOG:NOG18819 GO:GO:0007531 Uniprot:Q9UW23
        Length = 210

 Score = 119 (46.9 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 20/67 (29%), Positives = 43/67 (64%)

Query:   317 QRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
             ++ +  +QR    ++  L++ ++KN+ PN  E+  ++E  G++L+Q+  WF N+R R + 
Sbjct:   139 KKSKKKRQRLDNSTKEFLEKVFEKNKQPNRRERELIAEKHGVSLSQIRVWFTNKRMRKKE 198

Query:   377 PQQRAKN 383
             P+ +AK+
Sbjct:   199 PKSKAKS 205

 Score = 109 (43.4 bits), Expect = 0.00093, P = 0.00093
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query:   264 GEETVYCFKERSR--NALKE----CYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQ 317
             GEE     K+R R  N+ KE     ++KN+ PN  E+  ++E  G++L+Q+  WF N+R 
Sbjct:   135 GEEIKKSKKKRQRLDNSTKEFLEKVFEKNKQPNRRERELIAEKHGVSLSQIRVWFTNKRM 194

Query:   318 RDRTPQQRSIQRSRN 332
             R + P+ ++   S +
Sbjct:   195 RKKEPKSKAKSSSNS 209


>RGD|1311053 [details] [associations]
            symbol:Duxbl1 "double homeobox B-like 1" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 RGD:1311053 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00610000085975 IPI:IPI00766449
            Ensembl:ENSRNOT00000052224 UCSC:RGD:1311053 OMA:PESEANG
            OrthoDB:EOG4W3SP3 Uniprot:D3ZTT0
        Length = 353

 Score = 99 (39.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 19/57 (33%), Positives = 34/57 (59%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTFDPYS 390
             L E ++KNR+P    + +L++ TG+  +++  WF+NRR R   P+Q  +  +  P S
Sbjct:   109 LIEAFEKNRFPGIVTREKLAQETGIPESRIHIWFQNRRARHPDPKQGTRATSHPPES 165

 Score = 65 (27.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 13/47 (27%), Positives = 28/47 (59%)

Query:   273 ERSRNALKECYDKNRYPNPD--EKRQLSEITGLTLTQVSNWFKNRRQ 317
             +  ++ L+  ++KN  PNPD   +  L++  G++ +Q+  WF+  R+
Sbjct:    23 QSQKDTLRVWFEKN--PNPDLATRGHLAKKLGISESQIMTWFQKHRK 67


>WB|WBGene00012584 [details] [associations]
            symbol:ceh-100 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009792 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL110484
            GeneTree:ENSGT00530000069058 RefSeq:NP_001022429.1 UniGene:Cel.6906
            HSSP:P01367 ProteinModelPortal:Q7K714 SMR:Q7K714 IntAct:Q7K714
            MINT:MINT-6670220 PaxDb:Q7K714 PRIDE:Q7K714
            EnsemblMetazoa:Y38E10A.6b GeneID:174894 KEGG:cel:CELE_Y38E10A.6
            UCSC:Y38E10A.6b CTD:174894 WormBase:Y38E10A.6b eggNOG:NOG283475
            InParanoid:Q7K714 NextBio:885944 ArrayExpress:Q7K714 Uniprot:Q7K714
        Length = 1345

 Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
 Identities = 30/101 (29%), Positives = 57/101 (56%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD--RTPQQRSIQ--RSRNAL 334
             L + +   ++ N + K++L++   LT TQV +WF NRR+R      Q+ S++       L
Sbjct:   120 LDDVFINCQFINEETKKELAKELDLTTTQVKDWF-NRRRRHALEAHQKNSVELPEQMRIL 178

Query:   335 KECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 375
              E Y++N   + D K +L ++T L+   +SN+F  R ++++
Sbjct:   179 NEAYERNPILDTDTKNRLLDVTKLSANLISNYFIKRYKKEQ 219


>UNIPROTKB|F1M6P9 [details] [associations]
            symbol:F1M6P9 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00558628
            Ensembl:ENSRNOT00000050263 OMA:ENTIHIW Uniprot:F1M6P9
        Length = 137

 Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
 Identities = 22/61 (36%), Positives = 31/61 (50%)

Query:   320 RTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRD-RTPQ 378
             R P  R   + R  L + +++NR P    + QL + TGL    +  WF+NRR R  R P 
Sbjct:    66 RRPHTRLNLQQRRILVQAFERNRLPGFATREQLGQRTGLNENTIHIWFQNRRARQARAPD 125

Query:   379 Q 379
             Q
Sbjct:   126 Q 126


>UNIPROTKB|E1BAI9 [details] [associations]
            symbol:LOC531406 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:RNFPREV EMBL:DAAA02044943
            IPI:IPI00700029 RefSeq:XP_003587187.1 Ensembl:ENSBTAT00000037916
            GeneID:531406 KEGG:bta:531406 GeneTree:ENSGT00390000013263
            Uniprot:E1BAI9
        Length = 381

 Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
 Identities = 36/107 (33%), Positives = 50/107 (46%)

Query:   222 ELQQLWMRGHYKEHAKIRG-RDLGAVDKYRIRKKFPLPKTIWDGEETVYCFKERSRNALK 280
             +L QLW   HY+   K  G   L  V K+R RK+ P P ++         F    R  L+
Sbjct:    93 KLVQLWNDIHYRLAMKKLGVSTLTPVQKFRCRKRNPPPASLCPNGLKSRNFPREVRQKLE 152

Query:   281 E-CYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRS 326
             +     +  P+  E+  L+  T LT  QV NWF N R+R R   QR+
Sbjct:   153 DFASGVSTNPSKAEREGLASETHLTTEQVYNWFANYRRRQRALMQRA 199


>UNIPROTKB|F1NQR0 [details] [associations]
            symbol:IRX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0072086 "specification of loop of Henle identity" evidence=IEA]
            [GO:0072272 "proximal/distal pattern formation involved in
            metanephric nephron development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR008422 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00550000074365 EMBL:AADN02008203
            EMBL:AADN02008204 EMBL:AADN02008205 EMBL:AADN02008206
            EMBL:AADN02008207 EMBL:AADN02008208 EMBL:AADN02008209
            EMBL:AADN02008210 EMBL:AADN02008211 IPI:IPI00823319
            Ensembl:ENSGALT00000036978 Uniprot:F1NQR0
        Length = 85

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    24 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 62

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    24 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 62


>UNIPROTKB|F1NQR4 [details] [associations]
            symbol:IRX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0072086 "specification of loop of Henle identity" evidence=IEA]
            [GO:0072272 "proximal/distal pattern formation involved in
            metanephric nephron development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR008422 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00550000074365 EMBL:AADN02008203
            EMBL:AADN02008204 EMBL:AADN02008205 EMBL:AADN02008206
            EMBL:AADN02008207 EMBL:AADN02008208 EMBL:AADN02008209
            EMBL:AADN02008210 EMBL:AADN02008211 IPI:IPI00821510
            Ensembl:ENSGALT00000036976 Uniprot:F1NQR4
        Length = 74

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    24 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 62

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    24 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 62


>UNIPROTKB|F1NQR5 [details] [associations]
            symbol:IRX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0072086 "specification of loop of Henle identity" evidence=IEA]
            [GO:0072272 "proximal/distal pattern formation involved in
            metanephric nephron development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR008422 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00550000074365 EMBL:AADN02008203
            EMBL:AADN02008204 EMBL:AADN02008205 EMBL:AADN02008206
            EMBL:AADN02008207 EMBL:AADN02008208 EMBL:AADN02008209
            EMBL:AADN02008210 EMBL:AADN02008211 IPI:IPI00883130
            Ensembl:ENSGALT00000036975 Uniprot:F1NQR5
        Length = 69

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    19 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 57

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    19 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 57


>UNIPROTKB|F6RKD0 [details] [associations]
            symbol:IRX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0072086 "specification of loop of Henle identity" evidence=IEA]
            [GO:0072272 "proximal/distal pattern formation involved in
            metanephric nephron development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR008422 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 EMBL:AADN02008203 EMBL:AADN02008204
            EMBL:AADN02008205 EMBL:AADN02008206 EMBL:AADN02008207
            EMBL:AADN02008208 EMBL:AADN02008209 EMBL:AADN02008210
            EMBL:AADN02008211 IPI:IPI00819397 ProteinModelPortal:F6RKD0
            Ensembl:ENSGALT00000036977 Uniprot:F6RKD0
        Length = 78

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    26 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 64

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             L+E + KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    26 LQE-HRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 64


>UNIPROTKB|H0YKV5 [details] [associations]
            symbol:PKNOX1 "Homeobox protein PKNOX1" species:9606 "Homo
            sapiens" [GO:0001525 "angiogenesis" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0030217 "T cell differentiation"
            evidence=IEA] [GO:0030218 "erythrocyte differentiation"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR008422 InterPro:IPR009057 Pfam:PF05920 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
            GO:GO:0001525 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0003705 GO:GO:0043010 GO:GO:0030218 GO:GO:0030217
            HGNC:HGNC:9022 EMBL:AP001630 Ensembl:ENST00000557820 Bgee:H0YKV5
            Uniprot:H0YKV5
        Length = 113

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 19/35 (54%), Positives = 24/35 (68%)

Query:   288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
             YP  DEK+Q++  T LTL QV+NWF N R+R   P
Sbjct:    13 YPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQP 47

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 19/35 (54%), Positives = 24/35 (68%)

Query:   343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 377
             YP  DEK+Q++  T LTL QV+NWF N R+R   P
Sbjct:    13 YPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQP 47


>UNIPROTKB|H0YMX0 [details] [associations]
            symbol:PKNOX1 "Homeobox protein PKNOX1" species:9606 "Homo
            sapiens" [GO:0001525 "angiogenesis" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0030217 "T cell differentiation"
            evidence=IEA] [GO:0030218 "erythrocyte differentiation"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR008422 InterPro:IPR009057 Pfam:PF05920 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
            GO:GO:0001525 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0003705 GO:GO:0043010 GO:GO:0030218 GO:GO:0030217
            HGNC:HGNC:9022 EMBL:AP001630 Ensembl:ENST00000474336 Bgee:H0YMX0
            Uniprot:H0YMX0
        Length = 62

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 19/35 (54%), Positives = 24/35 (68%)

Query:   288 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 322
             YP  DEK+Q++  T LTL QV+NWF N R+R   P
Sbjct:    13 YPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQP 47

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 19/35 (54%), Positives = 24/35 (68%)

Query:   343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTP 377
             YP  DEK+Q++  T LTL QV+NWF N R+R   P
Sbjct:    13 YPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQP 47


>UNIPROTKB|D6RBG8 [details] [associations]
            symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
            IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
            Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
            Uniprot:D6RBG8
        Length = 118

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 22/79 (27%), Positives = 39/79 (49%)

Query:   314 NRRQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR-- 371
             ++++R R  +     +    L+  + +NRYP+   + +++  T LT  +V  WFKNRR  
Sbjct:    34 SKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAK 93

Query:   372 --QRDRTPQQRAKNRTFDP 388
               +R+R  Q       F P
Sbjct:    94 WRKRERNQQAELCKNGFGP 112


>FB|FBgn0031232 [details] [associations]
            symbol:CG11617 species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            EMBL:AE014134 GO:GO:0022008 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00550000074365
            eggNOG:NOG280165 HSSP:P01367 EMBL:AY070989 RefSeq:NP_001245817.1
            RefSeq:NP_608502.1 UniGene:Dm.6489 SMR:Q9VPL4
            EnsemblMetazoa:FBtr0078146 EnsemblMetazoa:FBtr0308246 GeneID:33183
            KEGG:dme:Dmel_CG11617 UCSC:CG11617-RA FlyBase:FBgn0031232
            InParanoid:Q9VPL4 OMA:SSEDSIW OrthoDB:EOG4ZCRMB GenomeRNAi:33183
            NextBio:782313 Uniprot:Q9VPL4
        Length = 294

 Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
 Identities = 23/64 (35%), Positives = 40/64 (62%)

Query:   285 KNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRNALKECYDKNRYP 344
             +N YP+ +EK+QL+  TGLT TQ+ NWF N R++ +  ++   ++S   L + Y+ N   
Sbjct:    52 ENPYPSREEKKQLAAETGLTYTQICNWFANWRRKLKNSEREKAKKSWGHLIKNYNHNARG 111

Query:   345 NPDE 348
             N ++
Sbjct:   112 NVEQ 115


>UNIPROTKB|F1NEV7 [details] [associations]
            symbol:IRX6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00550000074365
            EMBL:AADN02038207 IPI:IPI00883107 Ensembl:ENSGALT00000039720
            Uniprot:F1NEV7
        Length = 65

 Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
 Identities = 20/34 (58%), Positives = 23/34 (67%)

Query:   285 KNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    25 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 58

 Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
 Identities = 20/34 (58%), Positives = 23/34 (67%)

Query:   340 KNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    25 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 58


>UNIPROTKB|F1NHU5 [details] [associations]
            symbol:IRX6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00550000074365
            EMBL:AADN02038207 IPI:IPI00813255 Ensembl:ENSGALT00000030986
            OMA:KIMLAIM Uniprot:F1NHU5
        Length = 67

 Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
 Identities = 20/34 (58%), Positives = 23/34 (67%)

Query:   285 KNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 318
             KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    22 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 55

 Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
 Identities = 20/34 (58%), Positives = 23/34 (67%)

Query:   340 KNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQR 373
             KN YP   EK  L+ IT +TLTQVS WF N R+R
Sbjct:    22 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 55


>WB|WBGene00018022 [details] [associations]
            symbol:ceh-87 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:FO081204 PIR:T32346 RefSeq:NP_494332.2
            ProteinModelPortal:O17184 SMR:O17184 EnsemblMetazoa:F34D6.2
            GeneID:185241 KEGG:cel:CELE_F34D6.2 UCSC:F34D6.2 CTD:185241
            WormBase:F34D6.2 eggNOG:NOG313776 GeneTree:ENSGT00530000068111
            InParanoid:O17184 OMA:NSERITE NextBio:927548 Uniprot:O17184
        Length = 186

 Score = 111 (44.1 bits), Expect = 0.00032, P = 0.00032
 Identities = 31/116 (26%), Positives = 54/116 (46%)

Query:   273 ERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT-----PQQRSI 327
             + S N L++ YD   +     K +L  +TG++  Q+    +  R+ D+      P+    
Sbjct:    22 KNSSNVLRDYYDMGNFKISGNKEKLVALTGMSDRQIELHLQKYRREDKKNGVIIPKSVYT 81

Query:   328 QRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWF-KNRRQRDRTPQQRAK 382
                   L+E ++   + +     +L+  +GLT TQVS WF K RR R     +R+K
Sbjct:    82 PEQHAVLREGFEHCSWLSKSTLNKLASESGLTRTQVSTWFSKERRVRAGKKSKRSK 137


>ZFIN|ZDB-GENE-000128-11 [details] [associations]
            symbol:dbx1b "developing brain homeobox 1b"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0021515 "cell
            differentiation in spinal cord" evidence=IGI] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000128-11 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 HOGENOM:HOG000112172
            HOVERGEN:HBG005454 GO:GO:0021515 EMBL:AF030285 IPI:IPI00508605
            RefSeq:NP_571253.1 UniGene:Dr.81310 HSSP:P23441
            ProteinModelPortal:Q9PTU0 PRIDE:Q9PTU0 GeneID:30416 KEGG:dre:30416
            CTD:30416 eggNOG:NOG257690 InParanoid:Q9PTU0 OrthoDB:EOG4T4CW6
            NextBio:20806822 ArrayExpress:Q9PTU0 Uniprot:Q9PTU0
        Length = 322

 Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
 Identities = 23/77 (29%), Positives = 42/77 (54%)

Query:   271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRS 330
             F +  R AL++ + K +Y +  ++++L+   GL  +QV  WF+NRR + R  ++R +  S
Sbjct:   186 FSDVQRKALEKMFQKQKYISKPDRKKLATKLGLKDSQVKIWFQNRRMKWRNSKERELLSS 245

Query:   331 RNALKECYDKNRYPNPD 347
                 ++       PNPD
Sbjct:   246 GGCREQTLPTKMNPNPD 262


>UNIPROTKB|E1BR86 [details] [associations]
            symbol:ZHX1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR007087
            InterPro:IPR009057 InterPro:IPR015880 Pfam:PF00046 PROSITE:PS50071
            PROSITE:PS50157 SMART:SM00355 SMART:SM00389 GO:GO:0005634
            GO:GO:0003714 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
            GeneTree:ENSGT00530000063149 CTD:11244 OMA:KHKFLNE
            EMBL:AADN02022501 IPI:IPI00596933 RefSeq:XP_418454.2
            UniGene:Gga.11033 Ensembl:ENSGALT00000026417 GeneID:420347
            KEGG:gga:420347 NextBio:20823267 Uniprot:E1BR86
        Length = 873

 Score = 87 (35.7 bits), Expect = 0.00048, Sum P(3) = 0.00048
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDR 320
             LK  Y KN++P   E  +L +ITGLT  ++  WF + R   R
Sbjct:   479 LKVSYLKNQFPQDSEISRLMKITGLTKGEIKKWFSDTRYNQR 520

 Score = 76 (31.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
 Identities = 13/38 (34%), Positives = 25/38 (65%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR 371
             LK  + + ++P+P E  +L+E TGL  +++ +WF + R
Sbjct:   677 LKSSFVRTQWPSPQEYNKLAEETGLPRSEIVSWFGDTR 714

 Score = 46 (21.3 bits), Expect = 0.00048, Sum P(3) = 0.00048
 Identities = 19/86 (22%), Positives = 36/86 (41%)

Query:   113 PVLYETNAHDFNKHYLEIQQKAQEYLNMKKLNPNMSFTPEQIDCLCEAMQQSGDFDKLAM 172
             P + E         Y E Q K   + + ++L   +S+TPE+++      Q +G    +  
Sbjct:   310 PTMSEITVLSTQAKYTEEQIKI--WFSAQRLKHGVSWTPEEVE-EARRKQFNGTVHTVPQ 366

Query:   173 FLWSLPPQ--EAIRGQESVLRARAVV 196
              +  +P     A  G  S+L+   +V
Sbjct:   367 TITVIPAHISAASSGLPSILQTCQIV 392


>UNIPROTKB|H0YKK4 [details] [associations]
            symbol:MEIS3 "Homeobox protein Meis3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HGNC:HGNC:29537 ChiTaRS:MEIS3 EMBL:AC073548
            ProteinModelPortal:H0YKK4 SMR:H0YKK4 PRIDE:H0YKK4
            Ensembl:ENST00000560253 Bgee:H0YKK4 Uniprot:H0YKK4
        Length = 204

 Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query:   343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             YP+ ++K+QL++ TGLT+ QV+NWF N R+R   P     NRT
Sbjct:    88 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRT 130


>UNIPROTKB|H0YMV2 [details] [associations]
            symbol:MEIS3 "Homeobox protein Meis3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HGNC:HGNC:29537 ChiTaRS:MEIS3 EMBL:AC073548
            ProteinModelPortal:H0YMV2 SMR:H0YMV2 Ensembl:ENST00000560245
            Bgee:H0YMV2 Uniprot:H0YMV2
        Length = 207

 Score = 111 (44.1 bits), Expect = 0.00051, P = 0.00051
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query:   343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             YP+ ++K+QL++ TGLT+ QV+NWF N R+R   P     NRT
Sbjct:   121 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRT 163


>UNIPROTKB|F1P169 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104097 EMBL:AADN02010005
            EMBL:AADN02010006 IPI:IPI00822985 Ensembl:ENSGALT00000015650
            ArrayExpress:F1P169 Uniprot:F1P169
        Length = 156

 Score = 105 (42.0 bits), Expect = 0.00053, P = 0.00053
 Identities = 22/71 (30%), Positives = 42/71 (59%)

Query:   271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRS 330
             F E  R AL++ + K +Y +  ++++L+   GL  +QV  WF+NRR + R  +++ +  +
Sbjct:    16 FSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKEVLSN 75

Query:   331 RNALKECYDKN 341
             R  L+E   +N
Sbjct:    76 R-CLQEGLQEN 85


>TAIR|locus:2154724 [details] [associations]
            symbol:HB52 "homeobox protein 52" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
            to blue light" evidence=IEP] [GO:0009646 "response to absence of
            light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
            EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
            RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
            SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
            KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
            HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
            ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
            Uniprot:Q9FN29
        Length = 156

 Score = 105 (42.0 bits), Expect = 0.00053, P = 0.00053
 Identities = 23/73 (31%), Positives = 39/73 (53%)

Query:   313 KNRRQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQ 372
             +N + + +  ++R  Q     L++C+  N+   PD K QLS   GL   QV+ WF+N+R 
Sbjct:     2 ENSQSQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRA 61

Query:   373 RDRTPQQRAKNRT 385
             R +T     ++ T
Sbjct:    62 RFKTQSLEVQHCT 74


>UNIPROTKB|Q91975 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG270330 HOGENOM:HOG000112172
            HOVERGEN:HBG104467 OrthoDB:EOG4MPHQG EMBL:X59548 EMBL:X59549
            IPI:IPI00822533 PIR:A56566 UniGene:Gga.12249
            ProteinModelPortal:Q91975 SMR:Q91975 ArrayExpress:Q91975
            Uniprot:Q91975
        Length = 157

 Score = 105 (42.0 bits), Expect = 0.00057, P = 0.00057
 Identities = 22/71 (30%), Positives = 42/71 (59%)

Query:   271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRS 330
             F E  R AL++ + K +Y +  ++++L+   GL  +QV  WF+NRR + R  +++ +  +
Sbjct:    16 FSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKEVLSN 75

Query:   331 RNALKECYDKN 341
             R  L+E   +N
Sbjct:    76 R-CLQEGLQEN 85


>ASPGD|ASPL0000051137 [details] [associations]
            symbol:AN2020 species:162425 "Emericella nidulans"
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR008422
            InterPro:IPR009057 Pfam:PF05920 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 EMBL:BN001307 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 ProteinModelPortal:C8VLE8
            SMR:C8VLE8 EnsemblFungi:CADANIAT00008688 HOGENOM:HOG000190406
            OMA:MAISYAS Uniprot:C8VLE8
        Length = 293

 Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query:   313 KNRRQRDRTPQQRSIQRSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQ 372
             +NRR+R   P  + +     A    +  + YP+ ++K+ L   TGLT+ Q+SNWF N R+
Sbjct:   197 RNRRRRGNLP--KPVTEILKAWFHAHLDHPYPSEEDKQMLMSRTGLTINQISNWFINARR 254

Query:   373 RDRTPQQRAKNRT 385
             R   P  R + RT
Sbjct:   255 R-HLPALRNQRRT 266


>UNIPROTKB|F1P4T4 [details] [associations]
            symbol:HOXD13 "Homeobox protein Hox-D13" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00670000097683
            IPI:IPI00598090 EMBL:AADN02020034 Ensembl:ENSGALT00000015092
            OMA:CANDQTQ Uniprot:F1P4T4
        Length = 111

 Score = 94 (38.1 bits), Expect = 0.00063, P = 0.00063
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query:   320 RTPQQRSIQRSRNALKEC---YDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT 376
             R  +++ +  ++  LKE    Y  N++ N D++R++S  T L+  QV+ WF+NRR +D+ 
Sbjct:    42 RRGRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKK 101

Query:   377 PQQRAKN 383
                + K+
Sbjct:   102 IVSKLKD 108


>ZFIN|ZDB-GENE-030131-5486 [details] [associations]
            symbol:nanog "nanog homeobox" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA;IGI] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001706 "endoderm formation" evidence=IMP]
            [GO:0007369 "gastrulation" evidence=IGI;IMP] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-5486
            GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001706 eggNOG:NOG297592
            CTD:79923 EMBL:CABZ01072215 EMBL:BC162315 EMBL:BC162318
            EMBL:EF550998 EMBL:JN809237 EMBL:JN615142 IPI:IPI00851709
            RefSeq:NP_001091862.1 UniGene:Dr.46544 STRING:A5JNG8
            Ensembl:ENSDART00000114762 GeneID:792333 KEGG:dre:792333
            GeneTree:ENSGT00520000059940 HOGENOM:HOG000206497
            HOVERGEN:HBG105733 OrthoDB:EOG4RBQKF NextBio:20931014
            Uniprot:A5JNG8
        Length = 384

 Score = 117 (46.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
 Identities = 34/94 (36%), Positives = 45/94 (47%)

Query:   266 ETVYCFKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQR 325
             +T   F E   NAL   ++  RY  P E + L+  TGLT  QV  WF+NRR +      +
Sbjct:   197 KTRAAFSEEQMNALVNRFNVQRYLTPAEMKTLAGATGLTYKQVKTWFQNRRMK-----LK 251

Query:   326 SIQRSRNALKECYDKNRYPN-PDEKRQL-SEITG 357
               QR  + + E Y  N  PN P  + Q  SE  G
Sbjct:   252 RHQRDSSWMTERYVVNAVPNTPASQSQFQSEPPG 285

 Score = 39 (18.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query:    73 SHNFDSKYHAELQQLWMRGHYKEH 96
             S+NF+  YHA    L M     EH
Sbjct:     9 SYNFNPSYHAYAYGL-MYPQVSEH 31

 Score = 39 (18.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query:   212 SHNFDSKYHAELQQLWMRGHYKEH 235
             S+NF+  YHA    L M     EH
Sbjct:     9 SYNFNPSYHAYAYGL-MYPQVSEH 31


>UNIPROTKB|F1NXJ0 [details] [associations]
            symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104097 IPI:IPI00822533
            EMBL:AADN02010005 EMBL:AADN02010006 Ensembl:ENSGALT00000038779
            ArrayExpress:F1NXJ0 Uniprot:F1NXJ0
        Length = 160

 Score = 105 (42.0 bits), Expect = 0.00069, P = 0.00069
 Identities = 22/71 (30%), Positives = 42/71 (59%)

Query:   271 FKERSRNALKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRS 330
             F E  R AL++ + K +Y +  ++++L+   GL  +QV  WF+NRR + R  +++ +  +
Sbjct:    19 FSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKEVLSN 78

Query:   331 RNALKECYDKN 341
             R  L+E   +N
Sbjct:    79 R-CLQEGLQEN 88


>UNIPROTKB|J9P2Q9 [details] [associations]
            symbol:ZHX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR015880
            Pfam:PF00046 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00530000063149 CTD:11244 OMA:KHKFLNE
            EMBL:AAEX03008782 RefSeq:XP_532322.1 Ensembl:ENSCAFT00000001543
            GeneID:475089 KEGG:cfa:475089 Uniprot:J9P2Q9
        Length = 873

 Score = 87 (35.7 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRN 332
             LK  Y KN++P+  E  +L +ITGLT  ++  WF + R   R  +        N
Sbjct:   479 LKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNN 532

 Score = 76 (31.8 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 13/38 (34%), Positives = 25/38 (65%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR 371
             LK  + + ++P+P+E  +L+E +GL  T + +WF + R
Sbjct:   675 LKSAFVRTQWPSPEEYDKLAEESGLARTDIVSWFGDTR 712

 Score = 44 (20.5 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query:   113 PVLYETNAHDFNKHYLEIQQKAQEYLNMKKLNPNMSFTPEQID 155
             P + E         Y E Q K   + + ++L   +S+TPE+++
Sbjct:   309 PTMSEITVLSAQAKYTEEQIKI--WFSAQRLKHGVSWTPEEVE 349


>RGD|620010 [details] [associations]
            symbol:Zhx1 "zinc fingers and homeoboxes 1" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IEA;ISO;ISS] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0003714
            "transcription corepressor activity" evidence=IEA;ISO] [GO:0005634
            "nucleus" evidence=IEA;ISO;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO;ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA;ISO;ISS]
            InterPro:IPR001356 InterPro:IPR007087 InterPro:IPR009057
            InterPro:IPR015880 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
            PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
            RGD:620010 GO:GO:0005634 GO:GO:0003714 GO:GO:0046872 GO:GO:0003677
            GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0046982
            CTD:11244 eggNOG:NOG39488 HOGENOM:HOG000013231 HOVERGEN:HBG007920
            OrthoDB:EOG4KWJS7 EMBL:AB072439 IPI:IPI00201087 RefSeq:NP_598304.1
            UniGene:Rn.16902 ProteinModelPortal:Q8R515 SMR:Q8R515
            MINT:MINT-1790457 STRING:Q8R515 PhosphoSite:Q8R515 PRIDE:Q8R515
            GeneID:171159 KEGG:rno:171159 UCSC:RGD:620010 InParanoid:Q8R515
            NextBio:622000 Genevestigator:Q8R515 GermOnline:ENSRNOG00000006412
            Uniprot:Q8R515
        Length = 873

 Score = 87 (35.7 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRN 332
             LK  Y KN++P+  E  +L +ITGLT  ++  WF + R   R  +        N
Sbjct:   479 LKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNN 532

 Score = 76 (31.8 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 13/38 (34%), Positives = 25/38 (65%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR 371
             LK  + + ++P+P+E  +L+E +GL  T + +WF + R
Sbjct:   675 LKSAFVRTQWPSPEEYDKLAEESGLARTDIVSWFGDTR 712

 Score = 44 (20.5 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query:   113 PVLYETNAHDFNKHYLEIQQKAQEYLNMKKLNPNMSFTPEQID 155
             P + E         Y E Q K   + + ++L   +S+TPE+++
Sbjct:   309 PTMSEITVLSAQAKYTEEQIKI--WFSAQRLKHGVSWTPEEVE 349


>UNIPROTKB|Q8R515 [details] [associations]
            symbol:Zhx1 "Zinc fingers and homeoboxes protein 1"
            species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR007087
            InterPro:IPR009057 InterPro:IPR015880 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
            SMART:SM00389 RGD:620010 GO:GO:0005634 GO:GO:0003714 GO:GO:0046872
            GO:GO:0003677 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0046982 CTD:11244 eggNOG:NOG39488 HOGENOM:HOG000013231
            HOVERGEN:HBG007920 OrthoDB:EOG4KWJS7 EMBL:AB072439 IPI:IPI00201087
            RefSeq:NP_598304.1 UniGene:Rn.16902 ProteinModelPortal:Q8R515
            SMR:Q8R515 MINT:MINT-1790457 STRING:Q8R515 PhosphoSite:Q8R515
            PRIDE:Q8R515 GeneID:171159 KEGG:rno:171159 UCSC:RGD:620010
            InParanoid:Q8R515 NextBio:622000 Genevestigator:Q8R515
            GermOnline:ENSRNOG00000006412 Uniprot:Q8R515
        Length = 873

 Score = 87 (35.7 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query:   279 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRSIQRSRN 332
             LK  Y KN++P+  E  +L +ITGLT  ++  WF + R   R  +        N
Sbjct:   479 LKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNN 532

 Score = 76 (31.8 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 13/38 (34%), Positives = 25/38 (65%)

Query:   334 LKECYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRR 371
             LK  + + ++P+P+E  +L+E +GL  T + +WF + R
Sbjct:   675 LKSAFVRTQWPSPEEYDKLAEESGLARTDIVSWFGDTR 712

 Score = 44 (20.5 bits), Expect = 0.00076, Sum P(3) = 0.00076
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query:   113 PVLYETNAHDFNKHYLEIQQKAQEYLNMKKLNPNMSFTPEQID 155
             P + E         Y E Q K   + + ++L   +S+TPE+++
Sbjct:   309 PTMSEITVLSAQAKYTEEQIKI--WFSAQRLKHGVSWTPEEVE 349


>UNIPROTKB|E9PBY5 [details] [associations]
            symbol:MEIS1 "Homeobox protein Meis1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AC007392 EMBL:AC092669 EMBL:AC093641 HGNC:HGNC:7000
            ChiTaRS:MEIS1 IPI:IPI00917897 ProteinModelPortal:E9PBY5 SMR:E9PBY5
            Ensembl:ENST00000450027 ArrayExpress:E9PBY5 Bgee:E9PBY5
            Uniprot:E9PBY5
        Length = 179

 Score = 107 (42.7 bits), Expect = 0.00082, P = 0.00082
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query:   343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRTFD---PYS 390
             YP+ ++K+QL++ TGLT+ QV+NWF N R+R   P     NR      PY+
Sbjct:   111 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGTPYN 161


>UNIPROTKB|H0YLG9 [details] [associations]
            symbol:MEIS3 "Homeobox protein Meis3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HGNC:HGNC:29537 ChiTaRS:MEIS3 EMBL:AC073548 SMR:H0YLG9
            Ensembl:ENST00000559688 Ensembl:ENST00000561204 Uniprot:H0YLG9
        Length = 243

 Score = 111 (44.1 bits), Expect = 0.00084, P = 0.00084
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query:   343 YPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRTPQQRAKNRT 385
             YP+ ++K+QL++ TGLT+ QV+NWF N R+R   P     NRT
Sbjct:   157 YPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRT 199


>UNIPROTKB|E9PGG2 [details] [associations]
            symbol:ANHX "Anomalous homeobox protein" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 EMBL:AK057223 EMBL:AC226150 IPI:IPI00387132
            RefSeq:NP_001177983.1 UniGene:Hs.703008 ProteinModelPortal:E9PGG2
            SMR:E9PGG2 Ensembl:ENST00000419717 Ensembl:ENST00000545940
            GeneID:647589 KEGG:hsa:647589 UCSC:uc010tci.2 CTD:647589
            GeneCards:GC12M133796 HGNC:HGNC:40024 neXtProt:NX_E9PGG2
            eggNOG:NOG289143 OMA:RNFPREV OrthoDB:EOG4P8FJ8 NextBio:120209
            Bgee:E9PGG2 Uniprot:E9PGG2
        Length = 379

 Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
 Identities = 37/105 (35%), Positives = 47/105 (44%)

Query:   222 ELQQLWMRGHYKEHAKIRG-RDLGAVDKYRIRKKFPLPKTIWDGEETVYCFKERSRNALK 280
             EL QLW   HY+   +  G   L  V K+R RK+ P P ++         F    R  L 
Sbjct:    93 ELVQLWNDIHYRLVMRRLGVAALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLH 152

Query:   281 E-CYDKNRYPNPDEKRQLSEITGLTLTQVSNWFKNRRQRDRT-PQ 323
                   N  P+  E+  L+  T LT  QV NWF N R+R R  PQ
Sbjct:   153 NFAVGVNTNPSKAERENLALETSLTPEQVYNWFANYRRRQRALPQ 197


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      390       390   0.00094  117 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  119
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  273 KB (2138 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.90u 0.15s 36.05t   Elapsed:  00:00:02
  Total cpu time:  35.91u 0.15s 36.06t   Elapsed:  00:00:02
  Start:  Thu Aug 15 15:06:51 2013   End:  Thu Aug 15 15:06:53 2013
WARNINGS ISSUED:  1
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with Six4 Six4 Six4	protein from Drosophila melanogaster	6.3e-69
BLAST match view associations BLAST with six4a six4a six4a sine oculis homeobox homolog 4a	gene_product from Danio rerio	8.5e-65
BLAST match view associations BLAST with Six4 Six4 Six4 sine oculis-related homeobox 4	protein from Mus musculus	1.4e-64
BLAST match view associations BLAST with Six4 Six4 Six4 SIX homeobox 4	gene from Rattus norvegicus	1.4e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Homeobox protein SIX4	protein from Homo sapiens	3.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Homeobox protein SIX4	protein from Homo sapiens	3.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Canis lupus familiaris	4.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Canis lupus familiaris	4.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Canis lupus familiaris	4.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Canis lupus familiaris	4.7e-64
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Sus scrofa	4.7e-64
BLAST match view associations BLAST with six4b six4b six4b sine oculis homeobox homolog 4b	gene_product from Danio rerio	5.4e-63
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Uncharacterized protein	protein from Gallus gallus	1.6e-61
BLAST match view associations BLAST with LOC100525814 LOC100525814 LOC100525814 Uncharacterized protein	protein from Sus scrofa	5.5e-61
BLAST match view associations BLAST with Six2 Six2 Six2 sine oculis-related homeobox 2	protein from Mus musculus	5.5e-61
BLAST match view associations BLAST with Six2 Six2 Six2 SIX homeobox 2	gene from Rattus norvegicus	5.5e-61
BLAST match view associations BLAST with six4.3 six4.3 six4.3 sine oculis homeobox homolog 4.3	gene_product from Danio rerio	8.3e-61
BLAST match view associations BLAST with SIX2 SIX2 SIX2 Homeobox protein SIX2	protein from Homo sapiens	1.2e-60
BLAST match view associations BLAST with six1b six1b six1b sine oculis homeobox homolog 1b	gene_product from Danio rerio	1.5e-60
BLAST match view associations BLAST with SIX2 SIX2 SIX2 Uncharacterized protein	protein from Bos taurus	3.1e-60
BLAST match view associations BLAST with SIX2 SIX2 SIX2 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Uncharacterized protein	protein from Bos taurus	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Homeobox protein SIX1	protein from Homo sapiens	3.1e-60
BLAST match view associations BLAST with Six1 Six1 Six1 Six homeobox 1	protein from Sus scrofa	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Homeobox protein SIX1	protein from Gorilla gorilla gorilla	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Homeobox protein SIX1	protein from Lagothrix lagotricha	3.1e-60
BLAST match view associations BLAST with SIX1 SIX1 SIX1 Uncharacterized protein	protein from Ailuropoda melanoleuca	3.1e-60
BLAST match view associations BLAST with D3U1G0 D3U1G0 D3U1G0 Six1	protein from Ovis aries	3.1e-60
BLAST match view associations BLAST with Six1 Six1 Six1 sine oculis-related homeobox 1	protein from Mus musculus	3.1e-60
BLAST match view associations BLAST with six2a six2a six2a sine oculis-related homeobox 2a	gene_product from Danio rerio	3.1e-60
BLAST match view associations BLAST with SIX5 SIX5 SIX5 Uncharacterized protein	protein from Bos taurus	3.1e-60
BLAST match view associations BLAST with SIX5 SIX5 SIX5 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-60
BLAST match view associations BLAST with SIX5 SIX5 SIX5 Homeobox protein SIX5	protein from Homo sapiens	3.1e-60
BLAST match view associations BLAST with Six5 Six5 Six5 sine oculis-related homeobox 5	protein from Mus musculus	3.1e-60
BLAST match view associations BLAST with six1a six1a six1a sine oculis homeobox homolog 1a	gene_product from Danio rerio	1.0e-59
BLAST match view associations BLAST with Six1 Six1 Six1 SIX homeobox 1	gene from Rattus norvegicus	2.2e-59
BLAST match view associations BLAST with six2b six2b six2b sine oculis-related homeobox 2b	gene_product from Danio rerio	3.5e-59
BLAST match view associations BLAST with so so so sine oculis	protein from Drosophila melanogaster	4.5e-59
BLAST match view associations BLAST with SIX3 SIX3 SIX3 Homeobox protein SIX3	protein from Gallus gallus	3.3e-56
BLAST match view associations BLAST with SIX3 SIX3 SIX3 Uncharacterized protein	protein from Bos taurus	3.3e-56
BLAST match view associations BLAST with SIX3 SIX3 SIX3 Uncharacterized protein	protein from Canis lupus familiaris	3.3e-56
BLAST match view associations BLAST with SIX3 SIX3 SIX3 Homeobox protein SIX3	protein from Homo sapiens	3.3e-56
BLAST match view associations BLAST with Six3 Six3 Six3 sine oculis-related homeobox 3	protein from Mus musculus	3.3e-56
BLAST match view associations BLAST with Six3 Six3 Six3 SIX homeobox 3	gene from Rattus norvegicus	3.3e-56
BLAST match view associations BLAST with six3a six3a six3a sine oculis homeobox homolog 3a	gene_product from Danio rerio	4.2e-56
BLAST match view associations BLAST with SIX6 SIX6 SIX6 Uncharacterized protein	protein from Canis lupus familiaris	8.6e-56
BLAST match view associations BLAST with LOC100519236 LOC100519236 LOC100519236 Uncharacterized protein	protein from Sus scrofa	1.8e-55
BLAST match view associations BLAST with six6b six6b six6b sine oculis-related homeobox 6b	gene_product from Danio rerio	1.8e-55
BLAST match view associations BLAST with SIX6 SIX6 SIX6 Homeobox protein SIX6	protein from Homo sapiens	2.3e-55
BLAST match view associations BLAST with Six6 Six6 Six6 sine oculis-related homeobox 6	protein from Mus musculus	2.3e-55
BLAST match view associations BLAST with Six6 Six6 Six6 SIX homeobox 6	gene from Rattus norvegicus	2.3e-55
BLAST match view associations BLAST with SIX6 SIX6 SIX6 Homeobox protein SIX6	protein from Gallus gallus	3.7e-55
BLAST match view associations BLAST with six3b six3b six3b sine oculis homeobox homolog 3b	gene_product from Danio rerio	6.1e-55
BLAST match view associations BLAST with six6a six6a six6a sine oculis-related homeobox 6a	gene_product from Danio rerio	7.8e-55
BLAST match view associations BLAST with SIX4 SIX4 SIX4 Uncharacterized protein	protein from Gallus gallus	7.8e-55
BLAST match view associations BLAST with Optix Optix Optix	protein from Drosophila melanogaster	3.0e-53
BLAST match view associations BLAST with six7 six7 six7 sine oculis homeobox homolog 7	gene_product from Danio rerio	1.3e-52
BLAST match view associations BLAST with six9 six9 six9 sine oculis homeobox homolog 9	gene_product from Danio rerio	1.7e-52
BLAST match view associations BLAST with ceh-33 ceh-33 ceh-33	gene from Caenorhabditis elegans	8.3e-51
BLAST match view associations BLAST with ceh-32 ceh-32 ceh-32	gene from Caenorhabditis elegans	9.5e-50
BLAST match view associations BLAST with ceh-34 ceh-34 ceh-34	gene from Caenorhabditis elegans	5.0e-44
BLAST match view associations BLAST with Six5 Six5 Six5 SIX homeobox 5	gene from Rattus norvegicus	5.9e-35
BLAST match view associations BLAST with unc-39 unc-39 unc-39	gene from Caenorhabditis elegans	1.3e-34
BLAST match view associations BLAST with unc-39 unc-39 unc-39 Protein UNC-39	protein from Caenorhabditis elegans	1.3e-34
BLAST match view associations BLAST with ceh-88 ceh-88 ceh-88	gene from Caenorhabditis elegans	1.1e-06
BLAST match view associations BLAST with DUX1 DUX1 DUX1 Double homeobox protein 1	protein from Homo sapiens	1.9e-06
BLAST match view associations BLAST with DUX5 DUX5 DUX5 Double homeobox protein 5	protein from Homo sapiens	5.0e-06
BLAST match view associations BLAST with MEIS1 MEIS1 MEIS1 Homeobox protein Meis1	protein from Homo sapiens	9.1e-06
BLAST match view associations BLAST with E2QZ93 E2QZ93 E2QZ93 Uncharacterized protein	protein from Canis lupus familiaris	9.5e-06
BLAST match view associations BLAST with ANHX ANHX ANHX Uncharacterized protein	protein from Canis lupus familiaris	9.6e-06
BLAST match view associations BLAST with DUX3 DUX3 DUX3 Putative double homeobox protein 3	protein from Homo sapiens	1.8e-05
BLAST match view associations BLAST with ceh-28 ceh-28 ceh-28	gene from Caenorhabditis elegans	4.8e-05
BLAST match view associations BLAST with ceh-28 ceh-28 ceh-28 Protein CEH-28	protein from Caenorhabditis elegans	4.8e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with TGIF1 TGIF1 TGIF1 Homeobox protein TGIF1	protein from Homo sapiens	5.3e-05
BLAST match view associations BLAST with MTLA1 MTLA1 MTLA1	gene_product from Candida albicans	5.9e-05
BLAST match view associations BLAST with MTLA1 MTLA1 MTLA1 Mating-type-like protein A1	protein from Candida albicans SC5314	5.9e-05
BLAST match view associations BLAST with Duxbl1 Duxbl1 Duxbl1 double homeobox B-like 1	gene from Rattus norvegicus	0.00011
BLAST match view associations BLAST with ceh-100 ceh-100 ceh-100	gene from Caenorhabditis elegans	0.00012
BLAST match view associations BLAST with ANHX ANHX ANHX Uncharacterized protein	protein from Bos taurus	0.00016
BLAST match view associations BLAST with PKNOX1 PKNOX1 PKNOX1 Homeobox protein PKNOX1	protein from Homo sapiens	0.00018
BLAST match view associations BLAST with PKNOX1 PKNOX1 PKNOX1 Homeobox protein PKNOX1	protein from Homo sapiens	0.00018
BLAST match view associations BLAST with PITX2 PITX2 PITX2 Pituitary homeobox 2	protein from Homo sapiens	0.00018
BLAST match view associations BLAST with CG11617 CG11617 CG11617	protein from Drosophila melanogaster	0.00021