BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8151
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q13011|ECH1_HUMAN Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo
sapiens GN=ECH1 PE=1 SV=2
Length = 328
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 114/214 (53%), Gaps = 66/214 (30%)
Query: 6 PD-TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLS 64
PD +Y++L V ++ V+HV+LNRP+K NAM N W E+ E
Sbjct: 51 PDHSYESLRVTSAQKHVLHVQLNRPNKRNAM-------------NKVFWREMVE------ 91
Query: 65 ENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAA 124
CF+ +S + +CR +V+S A
Sbjct: 92 -----------------------------------------CFNKISRDADCRAVVISGA 110
Query: 125 GKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRKLITTYQKSISSLERCPKPVISAV 182
GK+FTAG+DL M S +I + +DVAR S LR +IT YQ++ + +ERCPKPVI+AV
Sbjct: 111 GKMFTAGIDLMDMAS---DILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAV 167
Query: 183 HGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
HG CIGGG+ L+TA DIRY +DA+F +KEVD+G
Sbjct: 168 HGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVG 201
>sp|Q5RFG0|ECH1_PONAB Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo
abelii GN=ECH1 PE=2 SV=1
Length = 328
Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 114/214 (53%), Gaps = 66/214 (30%)
Query: 6 PD-TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLS 64
PD +Y++L V ++ V+HV+LNRP+K NAM N W E+ E
Sbjct: 51 PDHSYESLRVTSAQKHVLHVQLNRPNKRNAM-------------NKVFWREMVE------ 91
Query: 65 ENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAA 124
CF+ +S + +CR +V+S A
Sbjct: 92 -----------------------------------------CFNKISRDADCRAVVISGA 110
Query: 125 GKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRKLITTYQKSISSLERCPKPVISAV 182
GK+FTAG+DL M S +I + +DVAR S LR +IT YQ++ + +E+CPKPVI+AV
Sbjct: 111 GKMFTAGVDLMDMAS---DILQPKGDDVARISWYLRDIITRYQETFNVIEKCPKPVIAAV 167
Query: 183 HGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
HG CIGGG+ L+TA DIRY +DA+F +KEVD+G
Sbjct: 168 HGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVG 201
>sp|Q62651|ECH1_RAT Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
OS=Rattus norvegicus GN=Ech1 PE=1 SV=2
Length = 327
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 65/211 (30%)
Query: 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENE 67
Y+++ V ++ V+HV+LNRP+K NAM N W E+ E
Sbjct: 53 NYESIQVTSAQKHVLHVQLNRPEKRNAM-------------NRAFWRELVE--------- 90
Query: 68 ECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKI 127
CF +S++ +CR +V+S AGK+
Sbjct: 91 --------------------------------------CFQKISKDSDCRAVVVSGAGKM 112
Query: 128 FTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGA 185
FT+G+DL M S +I + +DVAR + LR LI+ YQK+ + +E+CPKPVI+A+HG
Sbjct: 113 FTSGIDLMDMAS---DILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGG 169
Query: 186 CIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
CIGGG+ LI+A DIRY T+DA+F +KEVD+G
Sbjct: 170 CIGGGVDLISACDIRYCTQDAFFQVKEVDVG 200
>sp|O35459|ECH1_MOUSE Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus
musculus GN=Ech1 PE=2 SV=1
Length = 327
Score = 137 bits (344), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 111/211 (52%), Gaps = 65/211 (30%)
Query: 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENE 67
Y+++ V ++ V+HV+LNRP+K NAM N W E+ E
Sbjct: 53 NYESIQVTSAQKHVLHVQLNRPEKRNAM-------------NRAFWRELVE--------- 90
Query: 68 ECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKI 127
CF +S++ +CR +V+S AGK+
Sbjct: 91 --------------------------------------CFQKISKDSDCRAVVVSGAGKM 112
Query: 128 FTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGA 185
FT+G+DL M S E+ + +D AR + LR LI+ YQK+ + +E+CPKPVI+A+HG
Sbjct: 113 FTSGIDLMDMAS---ELMQPSGDDAARIAWYLRDLISKYQKTFTVIEKCPKPVIAAIHGG 169
Query: 186 CIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
CIGGG+ L++A DIRY T+DA+F +KEVD+G
Sbjct: 170 CIGGGVDLVSACDIRYCTQDAFFQIKEVDMG 200
>sp|Q54SS0|ECH1_DICDI Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
OS=Dictyostelium discoideum GN=ech1 PE=3 SV=1
Length = 293
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 107 FDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILR--KLITTY 164
+D + + + R ++L GK TAGL+L + L I +V++ L K+I +
Sbjct: 61 YDEIQNDSKIRCVILRGEGKGLTAGLNLGKIAPL---ITGDSEVSQSQNNLDLFKMIRRW 117
Query: 165 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI 215
Q S+ + +C KP I+ +HGACIGGG+ +ITA DIR + DA F+++E +
Sbjct: 118 QASLDKINKCSKPTIALIHGACIGGGVDMITACDIRLCSSDAKFSIRETKL 168
>sp|P94549|FADB_BACSU Probable enoyl-CoA hydratase OS=Bacillus subtilis (strain 168)
GN=fadB PE=2 SV=1
Length = 258
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 101 EDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 160
E++ C D + R I++ G+ F+AG D+ SL ED + L
Sbjct: 31 EELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSL----KGNEDSSL-------L 79
Query: 161 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
Q+ + +E PKP+I+A+HGA +GGG+ L A IR A +DA L E+++G
Sbjct: 80 AERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLG 135
>sp|Q7U004|ECH12_MYCBO Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA12 PE=3 SV=1
Length = 285
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 105 ECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 164
E +S + RV+VL+ AG+ F++G D S G + E++ R + LR +
Sbjct: 53 EALAQVSYDNSVRVVVLTGAGRGFSSGADHK---SAGV-VPHVENLTRPTYALRSM-ELL 107
Query: 165 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
I L R +PVI+AV+G IGGG+ L AADIR A+ A+F ++ G
Sbjct: 108 DDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNG 159
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENE 67
T ++V P+ + + LNRP+++N+M + +P K E +S +
Sbjct: 16 TVSLVLVEHPRPEIAQITLNRPERMNSMAFDVMVPLK-------------EALAQVSYDN 62
Query: 68 ECRVIILSAAGKIFTAGLD 86
RV++L+ AG+ F++G D
Sbjct: 63 SVRVVVLTGAGRGFSSGAD 81
>sp|O53163|ECH12_MYCTU Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis
GN=echA12 PE=3 SV=1
Length = 285
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 105 ECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 164
E +S + RV+VL+ AG+ F+ G D S G + E++ R + LR +
Sbjct: 53 EALAQVSYDNSVRVVVLTGAGRGFSPGADHK---SAGV-VPHVENLTRPTYALRSM-ELL 107
Query: 165 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
I L R +PVI+AV+G IGGG+ L AADIR A+ A+F ++ G
Sbjct: 108 DDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNG 159
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENE 67
T ++V P+ + + LNRP+++N+M + +P K E +S +
Sbjct: 16 TVSLVLVEHPRPEIAQITLNRPERMNSMAFDVMVPLK-------------EALAQVSYDN 62
Query: 68 ECRVIILSAAGKIFTAGLD 86
RV++L+ AG+ F+ G D
Sbjct: 63 SVRVVVLTGAGRGFSPGAD 81
>sp|P53526|ECH12_MYCLE Probable enoyl-CoA hydratase echA12 OS=Mycobacterium leprae (strain
TN) GN=echA12 PE=3 SV=1
Length = 294
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Query: 68 ECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKI 127
E +I L+ G++ + LDL M SL Q ++ + RV+VL+ AG+
Sbjct: 30 EVALITLNRPGRMNSMALDL--MKSLKQ----------VLKRITYDHSVRVVVLTGAGRG 77
Query: 128 FTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACI 187
F +G D + + E + + + LR + ++ I +L R +PVI+A++G I
Sbjct: 78 FCSGADQK----FTAPVPQVEGLTQPVRALRAM-ELLEEVILALRRLHQPVIAAINGPAI 132
Query: 188 GGGMSLITAADIRYATKDAWFTLKEVDIG 216
GGG+ L AAD+R A+ A+F ++ G
Sbjct: 133 GGGLCLALAADVRVASTRAYFRAAGINNG 161
>sp|Q869N6|CRTL_DICDI 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial
OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1
Length = 299
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 102 DIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 161
D + D+L+E+++ + +VL+ GK F+AG DL ++ ++ E ++++
Sbjct: 66 DYKKVVDTLAEDKDLKCVVLTGEGKAFSAGGDLDFLIERTKDTPENN---------QRIM 116
Query: 162 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
+ ++ + P P+ISA++GA IG G L A DIR + A L +G
Sbjct: 117 ERFYRTFLYIRSLPVPIISAINGAAIGAGFCLALATDIRVVSNKAPVGLTFTKLG 171
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEVLARQG----------QQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T DA L EV +G
Sbjct: 128 CTDDAKTVLGLPEVQLG 144
>sp|Q31YB7|FADJ_SHIBS Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 4 (strain Sb227) GN=fadJ PE=3 SV=1
Length = 714
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 90 MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQE 148
M +L E A Q + L EN+E R V+ +SA F AG D++ M+ + + E E
Sbjct: 28 MNTLKAEFASQ--VRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTVQEAE 84
Query: 149 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA-- 206
+AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D
Sbjct: 85 ALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKT 134
Query: 207 WFTLKEVDIG 216
L EV +G
Sbjct: 135 VLGLPEVQLG 144
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEVLARQG----------QQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T DA L EV +G
Sbjct: 128 CTDDAKTVLGLPEVQLG 144
>sp|Q32DJ4|FADJ_SHIDS Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1
Length = 714
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQD----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D +L EV +G
Sbjct: 128 CTDDPKTVLSLPEVQLG 144
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQG----------QQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRM 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|B7LBJ5|FADJ_ECO55 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain 55989 / EAEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|A7ZPF8|FADJ_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|B5YXY4|FADJ_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|B7LLD0|FADJ_ESCF3 Fatty acid oxidation complex subunit alpha OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=fadJ PE=3 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + + EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFAAQ--VRAILKEIRENKEIRGVVFISAKADNFIAGADIN-MIDHC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 NTAMEAETLARQG----------QQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRI 127
Query: 202 ATKD--AWFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTILGLPEVQLG 144
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN++ R V+ +SA F AG D++ M++
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKDLRGVVFISAKPDNFIAGADIN-MIANC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEALARQG----------QQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|Q0TFA6|FADJ_ECOL5 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEVLARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|B1IXA5|FADJ_ECOLC Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 90 MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQE 148
M +L E A Q + L EN+E R V+ +SA F AG D++ M+ + E E
Sbjct: 28 MNTLKAEFASQ--VRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAE 84
Query: 149 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA-- 206
+AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D
Sbjct: 85 ALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKT 134
Query: 207 WFTLKEVDIG 216
L EV +G
Sbjct: 135 VLGLPEVQLG 144
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 90 MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQE 148
M +L E A Q + L EN+E R V+ +SA F AG D++ M+ + E E
Sbjct: 28 MNTLKAEFASQ--VRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAE 84
Query: 149 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA-- 206
+AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D
Sbjct: 85 ALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKT 134
Query: 207 WFTLKEVDIG 216
L EV +G
Sbjct: 135 VLGLPEVQLG 144
>sp|Q83QQ0|FADJ_SHIFL Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
GN=fadJ PE=3 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 90 MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQE 148
M +L E A Q + L EN+E R V+ +SA F AG D++ M+ + E E
Sbjct: 28 MNTLKAEFASQ--VRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAE 84
Query: 149 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA-- 206
+AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D
Sbjct: 85 ALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKT 134
Query: 207 WFTLKEVDIG 216
L EV +G
Sbjct: 135 VLGLPEVQLG 144
>sp|B2TWV4|FADJ_SHIB3 Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3
SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 90 MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQE 148
M +L E A Q + L EN+E R V+ +SA F AG D++ M+ + E E
Sbjct: 28 MNTLKAEFASQ--VRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAE 84
Query: 149 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA-- 206
+AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D
Sbjct: 85 ALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKT 134
Query: 207 WFTLKEVDIG 216
L EV +G
Sbjct: 135 VLGLPEVQLG 144
>sp|A7MQP0|FADB_CROS8 Fatty acid oxidation complex subunit alpha OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=fadB PE=3 SV=1
Length = 729
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 103 IGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLIT 162
+G D L + + + ++L + F G D++ LSL Q AEQ L + +
Sbjct: 39 LGHALDVLEKQHDLKALLLRSEKAAFIVGADITEFLSLFQVPAEQ---------LSQWLH 89
Query: 163 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
+ LE P P + A++G +GGG + A D R AT DA L E +G
Sbjct: 90 FANSVFNRLEDLPVPTLCAINGYALGGGCECVLATDFRLATPDARIGLPETKLG 143
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 42 PDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ 100
P +N ++ +G D L + + + ++L + F G D++ LSL Q AEQ
Sbjct: 25 PGSVNKLDTATVASLGHALDVLEKQHDLKALLLRSEKAAFIVGADITEFLSLFQVPAEQ 83
>sp|Q0T2E6|FADJ_SHIF8 Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
serotype 5b (strain 8401) GN=fadJ PE=3 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 90 MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQE 148
M +L E A Q + L EN+E R V+ +SA F AG D++ M+ + E E
Sbjct: 28 MNTLKAEFASQ--VRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAE 84
Query: 149 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA-- 206
+AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D
Sbjct: 85 ALARQG----------QQLMAEINALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKT 134
Query: 207 WFTLKEVDIG 216
L EV +G
Sbjct: 135 VLGLPEVQLG 144
>sp|B7MY16|FADJ_ECO81 Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81
(strain ED1a) GN=fadJ PE=3 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + L EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEVLARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O9:H4 (strain HS) GN=fadJ PE=3 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 90 MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQE 148
M +L E A Q + L EN+E R V+ +SA F AG D++ M+ + E E
Sbjct: 28 MNTLKAEFASQ--VRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAE 84
Query: 149 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA-- 206
+AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D
Sbjct: 85 ALARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKT 134
Query: 207 WFTLKEVDIG 216
L EV +G
Sbjct: 135 VLGLPEVQLG 144
>sp|B7MGV7|FADJ_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + + EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQIRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEVLARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 113 NEECRVIVLSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL 171
N R ++L+ G K F AG DL + L +ED +S ++ Q++ + L
Sbjct: 46 NSNIRCVILTGTGEKAFCAGADLKERIKL------KEDQVLES------VSLIQRTAALL 93
Query: 172 ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI 215
+ P+PVI+A++G+ +GGG+ L A D+R AT+ A L E +
Sbjct: 94 DALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETGL 137
>sp|Q1R972|FADJ_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + + EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQIRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEVLARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|A1ADI8|FADJ_ECOK1 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O1:K1 / APEC GN=fadJ PE=3 SV=1
Length = 714
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + + EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQIRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEVLARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|B7UFZ8|FADJ_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 85 LDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLG 141
+D+ G M +L E A Q + + EN+E R V+ +SA F AG D++ M+
Sbjct: 21 IDVPGEKMNTLKAEFASQ--VRAIIKQIRENKELRGVVFVSAKPDNFIAGADIN-MIGNC 77
Query: 142 QEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRY 201
+ E E +AR+ Q+ ++ + P PVI+A+HGAC+GGG+ L A R
Sbjct: 78 KTAQEAEVLARQG----------QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRV 127
Query: 202 ATKDA--WFTLKEVDIG 216
T D L EV +G
Sbjct: 128 CTDDPKTVLGLPEVQLG 144
>sp|C6DAL7|FADJ_PECCP Fatty acid oxidation complex subunit alpha OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=fadJ PE=3
SV=1
Length = 727
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 84 GLDLSG--MLSLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSL 140
G+D+ G + +L E A+Q I F+ ++ R +I++S+ F AG D++ ML+
Sbjct: 30 GIDVPGEKVNTLKSEFAQQ--ILSVFEQARQHATLRGLILISSKPDSFIAGADIT-MLNQ 86
Query: 141 GQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIR 200
+ + E++A++ Q++ + P PV++A+HGAC+GGG+ L A D R
Sbjct: 87 CRSAEQAENLAKQG----------QETFEQIAALPFPVVAAIHGACLGGGLELALACDYR 136
Query: 201 YATKD--AWFTLKEVDIG 216
+ D L EV +G
Sbjct: 137 VCSLDEKTVLGLPEVQLG 154
>sp|Q64428|ECHA_RAT Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus
norvegicus GN=Hadha PE=1 SV=2
Length = 763
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 92 SLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDV 150
+L +E+ Q + E + + N++ R +++S+ F AG D++ + S ++
Sbjct: 63 TLNKEV--QSEFVEVMNEIWANDQIRSAVLISSKPGCFVAGADINMLAS----CTTPQEA 116
Query: 151 ARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD 205
AR S+ QK LE+ PKPV++A+ G+C+GGG+ L A R ATKD
Sbjct: 117 ARISQ-------EGQKMFEKLEKSPKPVVAAISGSCLGGGLELAIACQYRIATKD 164
>sp|A8G8D1|FADB_SERP5 Fatty acid oxidation complex subunit alpha OS=Serratia
proteamaculans (strain 568) GN=fadB PE=3 SV=1
Length = 729
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 103 IGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLIT 162
+GE L + E + ++L + F G D++ LSL AE+ L++ +
Sbjct: 39 LGEALAVLEKQTELKGLLLRSTKAAFIVGADITEFLSLFAAPAEK---------LQEWLN 89
Query: 163 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
+ LE P P ISA++G +GGG I A D R A+ DA L E +G
Sbjct: 90 FANAIFNRLEDLPVPTISAINGYALGGGCECILATDFRVASPDARIGLPETKLG 143
>sp|A1JIG4|FADB_YERE8 Fatty acid oxidation complex subunit alpha OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=fadB PE=3 SV=1
Length = 729
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 102 DIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 161
++GE L + E + ++L +A F G D++ LSL E E+ L + +
Sbjct: 38 NLGEALVVLEKQSELKGLLLRSAKAAFIVGADITEFLSLFNEPPEK---------LHQWL 88
Query: 162 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
+ LE P P I+A++G +GGG I A D R A+ +A L E +G
Sbjct: 89 VFANDIFNRLEDLPVPTIAAINGYALGGGCECILATDFRVASPEARIGLPETKLG 143
>sp|O69762|HCHL_PSEFL Hydroxycinnamoyl-CoA hydratase-lyase OS=Pseudomonas fluorescens
PE=1 SV=1
Length = 276
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 105 ECFDSLSENEECRVIVLSAAGKIFTAGLDLSGML---SLGQEIAEQEDVARKSKILRKLI 161
+ ++L ++ V+VL+ AG+ +TAG+DL G EI +++ S+ KL+
Sbjct: 43 DVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWKLL 102
Query: 162 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
Y KP I+ V+G C GGG S + A D+ +A F L E++ G
Sbjct: 103 RMY----------AKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWG 147
>sp|A4WFX4|FADB_ENT38 Fatty acid oxidation complex subunit alpha OS=Enterobacter sp.
(strain 638) GN=fadB PE=3 SV=1
Length = 729
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 103 IGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLIT 162
+G D L + + + ++L + F G D++ LSL Q EQ L + +
Sbjct: 39 LGHALDVLEKQSDLKGLLLRSEKAAFIVGADITEFLSLFQVPEEQ---------LSQWLH 89
Query: 163 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
+ LE P P ISAV+G +GGG + A D R AT D L E +G
Sbjct: 90 FANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLG 143
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 101 EDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 160
E++ + E RVI+++ GK F AG D++ L AE ++K + +
Sbjct: 34 EELDRAVSQAESDPEIRVIIITGKGKAFCAGADITQFNQLTP--AEAWKFSKKGREI--- 88
Query: 161 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
+ +E KP I+ ++G +GGG+ L A DIR A ++A L E+++G
Sbjct: 89 -------MDKIEALSKPTIAMINGYALGGGLELALACDIRIAAEEAQLGLPEINLG 137
>sp|Q6DAP5|FADB_ERWCT Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=fadB PE=3 SV=1
Length = 729
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 53 WLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSE 112
WLE D ++E ++ SA G + T LD + SLG+ D L+E
Sbjct: 12 WLE-----DGIAE------LVFSAPGSVNT--LDTRTVASLGK----------ALDVLAE 48
Query: 113 NEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLE 172
+ ++L + F G D++ LSL AE+ L + + + LE
Sbjct: 49 QPNLKGLLLRSDKPAFIVGADITEFLSLFAAPAEK---------LHEWLVFANSIFNRLE 99
Query: 173 RCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216
P P +SA++ +GGG + A D R AT DA L E +G
Sbjct: 100 DLPVPTLSAINSYALGGGCECVLATDFRLATPDARIGLPETKLG 143
>sp|B5R3R9|FADJ_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1
Length = 715
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 92 SLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDV 150
+L E A Q + + EN+ + V+ +SA F AG D++ M+ Q E E +
Sbjct: 30 TLKAEFAAQ--VRAILKQIRENKALQGVVFISAKADNFIAGADIN-MIGHCQNAQEAETL 86
Query: 151 ARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWF 208
AR+ Q+ ++ ++ P PVI+A+HGAC+GGG+ + A R T D
Sbjct: 87 ARQG----------QQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVL 136
Query: 209 TLKEVDIG 216
L EV +G
Sbjct: 137 GLPEVQLG 144
>sp|B5RCL3|FADJ_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1
Length = 715
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 92 SLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDV 150
+L E A Q + + EN+ + V+ +SA F AG D++ M+ Q E E +
Sbjct: 30 TLKAEFAAQ--VRAILKQIRENKALQGVVFISAKADNFIAGADIN-MIGHCQNAQEAETL 86
Query: 151 ARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWF 208
AR+ Q+ ++ ++ P PVI+A+HGAC+GGG+ + A R T D
Sbjct: 87 ARQG----------QQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVL 136
Query: 209 TLKEVDIG 216
L EV +G
Sbjct: 137 GLPEVQLG 144
>sp|B4TCA8|FADJ_SALHS Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg
(strain SL476) GN=fadJ PE=3 SV=1
Length = 715
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 92 SLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDV 150
+L E A Q + + EN+ + V+ +SA F AG D++ M+ Q E E +
Sbjct: 30 TLKAEFAAQ--VRAILKQIRENKALQGVVFISAKADNFIAGADIN-MIGHCQNAQEAETL 86
Query: 151 ARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWF 208
AR+ Q+ ++ ++ P PVI+A+HGAC+GGG+ + A R T D
Sbjct: 87 ARQG----------QQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVL 136
Query: 209 TLKEVDIG 216
L EV +G
Sbjct: 137 GLPEVQLG 144
>sp|B5FPN1|FADJ_SALDC Fatty acid oxidation complex subunit alpha OS=Salmonella dublin
(strain CT_02021853) GN=fadJ PE=3 SV=1
Length = 715
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 92 SLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDV 150
+L E A Q + + EN+ + V+ +SA F AG D++ M+ Q E E +
Sbjct: 30 TLKAEFAAQ--VRAILKQIRENKALQGVVFISAKADNFIAGADIN-MIGHCQNAQEAETL 86
Query: 151 ARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWF 208
AR+ Q+ ++ ++ P PVI+A+HGAC+GGG+ + A R T D
Sbjct: 87 ARQG----------QQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVL 136
Query: 209 TLKEVDIG 216
L EV +G
Sbjct: 137 GLPEVQLG 144
>sp|B5EZR9|FADJ_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadJ PE=3 SV=1
Length = 715
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 92 SLGQEIAEQEDIGECFDSLSENEECR-VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDV 150
+L E A Q + + EN+ + V+ +SA F AG D++ M+ Q E E +
Sbjct: 30 TLKAEFAAQ--VRAILKQIRENKALQGVVFISAKADNFIAGADIN-MIGHCQNAQEAETL 86
Query: 151 ARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWF 208
AR+ Q+ ++ ++ P PVI+A+HGAC+GGG+ + A R T D
Sbjct: 87 ARQG----------QQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVL 136
Query: 209 TLKEVDIG 216
L EV +G
Sbjct: 137 GLPEVQLG 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,583,019
Number of Sequences: 539616
Number of extensions: 2862463
Number of successful extensions: 8630
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 7894
Number of HSP's gapped (non-prelim): 621
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)