Query psy8151
Match_columns 220
No_of_seqs 242 out of 1787
Neff 7.3
Searched_HMMs 46136
Date Fri Aug 16 19:55:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8151.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8151hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK09120 p-hydroxycinnamoyl Co 100.0 7.3E-34 1.6E-38 247.0 15.3 149 1-220 1-149 (275)
2 PRK05995 enoyl-CoA hydratase; 100.0 3.1E-33 6.8E-38 241.2 14.6 142 8-219 2-143 (262)
3 COG1024 CaiD Enoyl-CoA hydrata 100.0 3.2E-33 7E-38 240.5 14.5 140 8-219 3-142 (257)
4 PRK07327 enoyl-CoA hydratase; 100.0 5E-33 1.1E-37 240.8 15.7 143 7-219 8-150 (268)
5 PRK05674 gamma-carboxygeranoyl 100.0 2.5E-33 5.5E-38 242.4 13.7 143 8-219 3-145 (265)
6 PRK06142 enoyl-CoA hydratase; 100.0 4.6E-33 9.9E-38 241.4 14.1 150 8-219 4-153 (272)
7 PRK08139 enoyl-CoA hydratase; 100.0 7.5E-33 1.6E-37 239.6 15.3 140 8-219 9-148 (266)
8 PRK05862 enoyl-CoA hydratase; 100.0 6.6E-33 1.4E-37 238.6 14.9 138 8-220 2-139 (257)
9 PRK07468 enoyl-CoA hydratase; 100.0 6.4E-33 1.4E-37 239.4 14.5 142 9-219 3-144 (262)
10 PRK05809 3-hydroxybutyryl-CoA 100.0 1.1E-32 2.4E-37 237.5 15.5 140 7-219 1-141 (260)
11 PRK06143 enoyl-CoA hydratase; 100.0 1.4E-32 3.1E-37 236.6 14.6 137 10-218 6-143 (256)
12 PRK05980 enoyl-CoA hydratase; 100.0 1.4E-32 3E-37 236.9 14.4 140 11-219 4-144 (260)
13 PRK08140 enoyl-CoA hydratase; 100.0 1.8E-32 3.9E-37 236.4 15.1 142 8-219 2-143 (262)
14 TIGR03210 badI 2-ketocyclohexa 100.0 1.1E-32 2.3E-37 237.4 13.7 137 9-219 1-138 (256)
15 PRK05864 enoyl-CoA hydratase; 100.0 1.6E-32 3.5E-37 238.6 14.7 147 8-219 7-153 (276)
16 PRK08138 enoyl-CoA hydratase; 100.0 2.1E-32 4.5E-37 236.1 15.1 138 9-220 6-143 (261)
17 PLN02664 enoyl-CoA hydratase/d 100.0 1.5E-32 3.2E-37 238.7 14.2 142 17-219 14-155 (275)
18 PRK07260 enoyl-CoA hydratase; 100.0 1.6E-32 3.4E-37 236.1 14.0 142 9-219 1-142 (255)
19 PRK05870 enoyl-CoA hydratase; 100.0 2.1E-32 4.6E-37 234.6 14.2 137 11-220 4-140 (249)
20 PRK07509 enoyl-CoA hydratase; 100.0 2.9E-32 6.3E-37 235.1 15.1 145 9-219 2-146 (262)
21 PRK07657 enoyl-CoA hydratase; 100.0 2.6E-32 5.7E-37 235.3 14.8 139 10-220 3-142 (260)
22 PRK09674 enoyl-CoA hydratase-i 100.0 2.1E-32 4.6E-37 235.3 14.2 134 11-219 3-136 (255)
23 PRK08150 enoyl-CoA hydratase; 100.0 2.8E-32 6E-37 234.7 14.8 135 10-219 2-136 (255)
24 PRK06190 enoyl-CoA hydratase; 100.0 2.9E-32 6.3E-37 235.0 14.6 139 7-220 1-139 (258)
25 PRK06072 enoyl-CoA hydratase; 100.0 3.3E-32 7E-37 233.3 14.2 133 12-220 2-134 (248)
26 PRK07827 enoyl-CoA hydratase; 100.0 4.8E-32 1E-36 233.6 15.2 142 8-219 4-145 (260)
27 PRK07659 enoyl-CoA hydratase; 100.0 4.2E-32 9E-37 234.1 14.5 138 9-219 5-142 (260)
28 PRK08260 enoyl-CoA hydratase; 100.0 4.3E-32 9.4E-37 238.1 14.8 156 8-219 2-157 (296)
29 PRK05981 enoyl-CoA hydratase; 100.0 4E-32 8.6E-37 234.8 14.3 146 7-219 1-147 (266)
30 PRK06210 enoyl-CoA hydratase; 100.0 3.3E-32 7.1E-37 236.0 13.6 150 7-219 2-152 (272)
31 PRK05869 enoyl-CoA hydratase; 100.0 3.2E-32 6.9E-37 230.0 13.2 138 9-219 2-143 (222)
32 PRK07511 enoyl-CoA hydratase; 100.0 4.7E-32 1E-36 233.6 14.3 140 11-220 4-143 (260)
33 PRK06023 enoyl-CoA hydratase; 100.0 3.3E-32 7.2E-37 233.6 13.3 136 11-220 4-142 (251)
34 PRK08258 enoyl-CoA hydratase; 100.0 7.1E-32 1.5E-36 234.7 15.5 140 11-219 18-157 (277)
35 PRK06144 enoyl-CoA hydratase; 100.0 5.8E-32 1.3E-36 233.5 14.9 140 8-219 6-147 (262)
36 PRK08272 enoyl-CoA hydratase; 100.0 3.7E-32 8.1E-37 239.1 13.6 166 6-219 6-171 (302)
37 PRK09245 enoyl-CoA hydratase; 100.0 4.8E-32 1E-36 234.3 13.9 144 11-220 4-148 (266)
38 PRK09076 enoyl-CoA hydratase; 100.0 6.6E-32 1.4E-36 232.6 14.7 135 11-219 4-139 (258)
39 KOG1681|consensus 100.0 1.2E-32 2.7E-37 228.3 9.6 154 6-219 15-170 (292)
40 PLN02888 enoyl-CoA hydratase 100.0 5.3E-32 1.2E-36 234.2 14.0 139 6-219 5-143 (265)
41 PLN02600 enoyl-CoA hydratase 100.0 5.6E-32 1.2E-36 232.3 13.9 131 17-219 1-132 (251)
42 PRK06127 enoyl-CoA hydratase; 100.0 9.9E-32 2.1E-36 232.9 15.2 141 9-220 10-151 (269)
43 TIGR03189 dienoyl_CoA_hyt cycl 100.0 8.3E-32 1.8E-36 231.3 14.5 131 12-219 3-133 (251)
44 TIGR01929 menB naphthoate synt 100.0 7E-32 1.5E-36 232.6 14.0 140 9-219 1-141 (259)
45 PRK06495 enoyl-CoA hydratase; 100.0 8.5E-32 1.8E-36 231.8 14.5 140 8-219 2-141 (257)
46 TIGR02280 PaaB1 phenylacetate 100.0 5.2E-32 1.1E-36 232.9 13.1 136 13-219 2-137 (256)
47 PRK07658 enoyl-CoA hydratase; 100.0 8E-32 1.7E-36 231.7 14.3 136 11-219 3-138 (257)
48 PRK12478 enoyl-CoA hydratase; 100.0 6.5E-32 1.4E-36 237.3 14.0 154 8-219 3-157 (298)
49 PRK08290 enoyl-CoA hydratase; 100.0 1.3E-31 2.9E-36 234.3 15.5 161 7-218 1-161 (288)
50 PRK06563 enoyl-CoA hydratase; 100.0 5.4E-32 1.2E-36 232.7 12.7 135 13-219 2-136 (255)
51 PRK11423 methylmalonyl-CoA dec 100.0 1.2E-31 2.6E-36 231.5 14.3 139 7-220 1-141 (261)
52 PRK07799 enoyl-CoA hydratase; 100.0 1E-31 2.2E-36 232.0 13.7 142 8-219 3-144 (263)
53 PRK06494 enoyl-CoA hydratase; 100.0 1.3E-31 2.8E-36 230.9 14.3 136 8-219 2-138 (259)
54 PRK06688 enoyl-CoA hydratase; 100.0 1.2E-31 2.7E-36 230.7 13.8 137 10-220 5-141 (259)
55 PRK07938 enoyl-CoA hydratase; 100.0 1.5E-31 3.2E-36 229.5 14.1 136 12-219 3-138 (249)
56 PRK07854 enoyl-CoA hydratase; 100.0 1.7E-31 3.6E-36 228.4 14.4 129 12-219 2-130 (243)
57 PRK07112 polyketide biosynthes 100.0 2.1E-31 4.5E-36 229.2 14.0 139 8-219 2-140 (255)
58 PLN02157 3-hydroxyisobutyryl-C 100.0 2.1E-31 4.5E-36 241.9 14.5 141 10-219 37-177 (401)
59 PRK07396 dihydroxynaphthoic ac 100.0 2.3E-31 5E-36 231.1 14.2 140 8-219 11-151 (273)
60 PLN02874 3-hydroxyisobutyryl-C 100.0 2E-31 4.4E-36 241.1 14.3 144 5-219 6-149 (379)
61 PRK07110 polyketide biosynthes 100.0 3.5E-31 7.5E-36 227.1 13.7 135 9-219 4-138 (249)
62 PRK08252 enoyl-CoA hydratase; 100.0 4.2E-31 9.2E-36 227.1 14.0 134 10-220 3-136 (254)
63 PRK05617 3-hydroxyisobutyryl-C 100.0 6.7E-31 1.5E-35 234.8 14.2 141 11-220 4-145 (342)
64 PLN02921 naphthoate synthase 100.0 1.4E-30 3E-35 231.4 15.7 143 6-219 61-205 (327)
65 PLN03214 probable enoyl-CoA hy 100.0 1.4E-30 3E-35 226.8 15.1 148 1-219 1-152 (278)
66 PRK03580 carnitinyl-CoA dehydr 100.0 9.2E-31 2E-35 225.8 13.8 135 11-220 4-139 (261)
67 PRK08259 enoyl-CoA hydratase; 100.0 7.1E-31 1.5E-35 225.8 13.0 135 11-220 4-138 (254)
68 PLN02851 3-hydroxyisobutyryl-C 100.0 1.9E-30 4.2E-35 235.7 14.4 141 10-219 42-182 (407)
69 PLN02988 3-hydroxyisobutyryl-C 100.0 2E-30 4.3E-35 234.4 14.2 140 11-219 10-149 (381)
70 PRK08321 naphthoate synthase; 100.0 5.4E-30 1.2E-34 225.5 15.4 151 8-219 21-180 (302)
71 PLN02267 enoyl-CoA hydratase/i 100.0 1.1E-29 2.3E-34 216.8 14.3 136 12-219 2-140 (239)
72 PRK08788 enoyl-CoA hydratase; 100.0 1.3E-29 2.9E-34 221.5 15.0 148 6-219 11-165 (287)
73 PRK06213 enoyl-CoA hydratase; 100.0 1.3E-29 2.9E-34 214.7 14.0 132 11-219 4-136 (229)
74 TIGR03200 dearomat_oah 6-oxocy 100.0 8.6E-30 1.9E-34 226.6 13.3 130 21-219 38-168 (360)
75 PF00378 ECH: Enoyl-CoA hydrat 100.0 1.4E-29 2.9E-34 216.1 13.4 133 14-219 2-134 (245)
76 PRK11730 fadB multifunctional 100.0 1.7E-29 3.7E-34 244.5 15.2 140 11-219 7-146 (715)
77 TIGR02437 FadB fatty oxidation 100.0 4.9E-29 1.1E-33 241.1 15.0 140 11-219 7-146 (714)
78 KOG1680|consensus 100.0 1.7E-29 3.6E-34 215.1 9.2 137 10-220 36-172 (290)
79 PRK08184 benzoyl-CoA-dihydrodi 100.0 2.1E-28 4.6E-33 229.9 13.1 153 8-219 258-422 (550)
80 TIGR02441 fa_ox_alpha_mit fatt 100.0 5.8E-28 1.3E-32 234.2 15.6 142 6-219 9-154 (737)
81 TIGR03222 benzo_boxC benzoyl-C 100.0 9.8E-28 2.1E-32 224.9 15.5 146 5-219 6-166 (546)
82 PRK11154 fadJ multifunctional 99.9 1.6E-27 3.5E-32 230.6 15.4 137 12-219 7-147 (708)
83 TIGR03222 benzo_boxC benzoyl-C 99.9 2E-27 4.3E-32 222.9 14.6 140 8-219 254-418 (546)
84 PRK08184 benzoyl-CoA-dihydrodi 99.9 2.1E-26 4.6E-31 216.4 15.4 145 6-219 11-170 (550)
85 cd06558 crotonase-like Crotona 99.9 2.8E-26 6.1E-31 188.4 14.2 136 13-219 2-137 (195)
86 TIGR02440 FadJ fatty oxidation 99.9 4.5E-26 9.7E-31 220.2 15.5 136 13-219 3-142 (699)
87 KOG1679|consensus 99.9 5.6E-26 1.2E-30 187.3 9.6 132 16-219 36-168 (291)
88 COG0447 MenB Dihydroxynaphthoi 99.9 2.9E-24 6.2E-29 177.4 8.5 142 7-218 15-159 (282)
89 KOG1684|consensus 99.9 1E-22 2.3E-27 178.6 11.9 150 1-219 28-179 (401)
90 KOG0016|consensus 99.9 7.3E-22 1.6E-26 166.9 13.5 149 5-219 2-151 (266)
91 KOG1682|consensus 99.9 3E-22 6.4E-27 164.3 10.2 145 4-219 25-169 (287)
92 cd07014 S49_SppA Signal peptid 99.4 4.1E-13 8.9E-18 109.5 8.5 51 166-216 62-112 (177)
93 cd07019 S49_SppA_1 Signal pept 99.3 1.5E-11 3.3E-16 103.1 10.0 86 50-210 20-105 (211)
94 cd07022 S49_Sppa_36K_type Sign 99.2 1.3E-10 2.8E-15 97.6 10.7 45 168-213 67-111 (214)
95 cd07020 Clp_protease_NfeD_1 No 99.1 1.9E-10 4.2E-15 94.7 8.9 51 167-217 50-103 (187)
96 cd07023 S49_Sppa_N_C Signal pe 99.1 6.4E-10 1.4E-14 92.9 9.5 47 167-213 58-104 (208)
97 KOG1681|consensus 99.0 3.4E-11 7.5E-16 100.8 0.0 41 101-141 110-151 (292)
98 cd00394 Clp_protease_like Case 98.9 3.3E-09 7.2E-14 84.8 7.7 50 168-217 50-99 (161)
99 KOG1680|consensus 98.9 1.1E-09 2.3E-14 94.2 2.6 28 115-142 125-153 (290)
100 PF00378 ECH: Enoyl-CoA hydrat 98.7 6.5E-09 1.4E-13 88.6 2.3 31 111-141 84-115 (245)
101 TIGR00706 SppA_dom signal pept 98.7 7.7E-08 1.7E-12 80.5 8.4 44 170-213 54-99 (207)
102 cd07021 Clp_protease_NfeD_like 98.6 2.5E-07 5.5E-12 75.8 9.1 50 165-214 48-97 (178)
103 cd07016 S14_ClpP_1 Caseinolyti 98.6 9.9E-08 2.1E-12 76.4 5.4 52 167-218 50-101 (160)
104 cd07018 S49_SppA_67K_type Sign 98.5 1.7E-07 3.7E-12 79.1 6.7 46 167-213 70-115 (222)
105 TIGR02440 FadJ fatty oxidation 98.5 6.3E-08 1.4E-12 94.4 3.8 30 112-141 91-121 (699)
106 TIGR00705 SppA_67K signal pept 98.5 5.6E-07 1.2E-11 86.1 9.7 41 168-208 371-411 (584)
107 KOG1679|consensus 98.5 1.1E-07 2.5E-12 79.3 3.7 39 101-142 111-150 (291)
108 cd06558 crotonase-like Crotona 98.4 1.7E-07 3.7E-12 76.7 3.7 28 115-142 91-119 (195)
109 KOG1682|consensus 98.1 1.3E-06 2.9E-11 72.5 2.7 30 112-141 120-150 (287)
110 TIGR03133 malonate_beta malona 97.5 0.0013 2.7E-08 57.5 10.3 43 169-212 131-175 (274)
111 PRK07189 malonate decarboxylas 97.3 0.001 2.3E-08 58.7 8.6 43 169-212 140-184 (301)
112 KOG1683|consensus 97.3 0.00011 2.3E-09 66.1 1.5 121 10-204 56-179 (380)
113 KOG0016|consensus 97.3 0.00027 5.9E-09 60.6 3.7 34 105-141 98-132 (266)
114 PRK10949 protease 4; Provision 97.2 0.0035 7.6E-08 60.6 11.3 43 168-210 389-431 (618)
115 CHL00198 accA acetyl-CoA carbo 97.0 0.011 2.4E-07 52.6 11.8 136 50-210 76-227 (322)
116 TIGR00513 accA acetyl-CoA carb 96.9 0.0068 1.5E-07 53.9 9.2 49 162-210 176-224 (316)
117 PF01972 SDH_sah: Serine dehyd 96.9 0.0024 5.2E-08 55.5 5.9 53 167-219 110-162 (285)
118 PRK12319 acetyl-CoA carboxylas 96.8 0.0095 2E-07 51.6 9.1 88 99-210 83-171 (256)
119 PLN03230 acetyl-coenzyme A car 96.8 0.024 5.2E-07 52.1 11.9 48 163-210 247-294 (431)
120 PLN03229 acetyl-coenzyme A car 96.6 0.026 5.7E-07 55.1 11.7 49 162-210 267-315 (762)
121 COG0616 SppA Periplasmic serin 96.6 0.01 2.2E-07 52.9 8.2 48 168-216 122-169 (317)
122 PRK05724 acetyl-CoA carboxylas 96.6 0.03 6.5E-07 50.0 11.0 49 162-210 176-224 (319)
123 cd07015 Clp_protease_NfeD Nodu 96.6 0.0042 9E-08 50.7 5.2 47 168-214 51-100 (172)
124 PF01039 Carboxyl_trans: Carbo 96.6 0.021 4.6E-07 53.8 10.4 44 168-212 125-169 (493)
125 CHL00174 accD acetyl-CoA carbo 96.3 0.024 5.3E-07 50.0 8.5 41 173-213 205-246 (296)
126 cd07013 S14_ClpP Caseinolytic 96.3 0.022 4.9E-07 45.7 7.7 45 168-212 51-97 (162)
127 TIGR00515 accD acetyl-CoA carb 96.0 0.056 1.2E-06 47.5 9.4 46 168-213 186-232 (285)
128 PF00574 CLP_protease: Clp pro 95.8 0.083 1.8E-06 42.9 8.9 50 167-216 66-117 (182)
129 PRK05654 acetyl-CoA carboxylas 95.8 0.22 4.7E-06 44.0 12.1 45 168-212 187-232 (292)
130 PLN02820 3-methylcrotonyl-CoA 95.4 0.061 1.3E-06 51.6 8.0 41 171-211 201-242 (569)
131 cd07017 S14_ClpP_2 Caseinolyti 95.4 0.054 1.2E-06 43.8 6.5 49 168-216 60-110 (171)
132 TIGR01117 mmdA methylmalonyl-C 95.2 0.051 1.1E-06 51.6 6.7 39 173-211 152-191 (512)
133 TIGR03134 malonate_gamma malon 94.9 0.55 1.2E-05 40.3 11.5 45 166-210 98-143 (238)
134 COG1024 CaiD Enoyl-CoA hydrata 94.7 0.016 3.6E-07 49.7 1.7 35 107-141 88-123 (257)
135 PRK12553 ATP-dependent Clp pro 94.5 0.14 3E-06 42.9 6.8 46 168-213 86-133 (207)
136 TIGR01117 mmdA methylmalonyl-C 94.3 0.68 1.5E-05 44.0 11.7 51 161-211 374-428 (512)
137 PRK08150 enoyl-CoA hydratase; 94.1 0.022 4.7E-07 49.0 1.2 30 112-141 87-117 (255)
138 TIGR00705 SppA_67K signal pept 94.1 0.28 6.1E-06 47.3 8.8 44 167-211 118-161 (584)
139 PRK06143 enoyl-CoA hydratase; 94.0 0.027 5.8E-07 48.5 1.6 30 112-141 95-125 (256)
140 PRK08272 enoyl-CoA hydratase; 93.8 0.025 5.5E-07 49.8 1.0 31 111-141 121-152 (302)
141 PRK07327 enoyl-CoA hydratase; 93.8 0.036 7.7E-07 48.0 1.9 30 112-141 101-131 (268)
142 PRK09076 enoyl-CoA hydratase; 93.7 0.03 6.5E-07 48.2 1.3 30 112-141 90-120 (258)
143 COG1030 NfeD Membrane-bound se 93.7 0.45 9.6E-06 44.1 8.9 50 163-212 73-125 (436)
144 PRK00277 clpP ATP-dependent Cl 93.7 0.11 2.4E-06 43.2 4.6 45 168-212 82-128 (200)
145 PRK07938 enoyl-CoA hydratase; 93.6 0.033 7.3E-07 47.7 1.5 30 112-141 89-119 (249)
146 PRK05995 enoyl-CoA hydratase; 93.6 0.04 8.6E-07 47.4 1.9 30 112-141 94-124 (262)
147 PRK11778 putative inner membra 93.6 0.16 3.5E-06 45.6 5.7 45 169-213 148-192 (330)
148 PRK07827 enoyl-CoA hydratase; 93.5 0.041 8.8E-07 47.4 1.8 30 112-141 96-126 (260)
149 PRK05674 gamma-carboxygeranoyl 93.4 0.048 1.1E-06 47.1 2.0 30 112-141 96-126 (265)
150 PLN02664 enoyl-CoA hydratase/d 93.3 0.037 8E-07 48.1 1.3 30 112-141 106-136 (275)
151 PRK06023 enoyl-CoA hydratase; 93.3 0.048 1E-06 46.7 1.9 29 113-141 93-122 (251)
152 PRK12478 enoyl-CoA hydratase; 93.3 0.03 6.5E-07 49.4 0.6 30 113-142 108-138 (298)
153 TIGR03189 dienoyl_CoA_hyt cycl 93.3 0.04 8.7E-07 47.3 1.4 30 112-141 84-114 (251)
154 PRK08139 enoyl-CoA hydratase; 93.2 0.031 6.8E-07 48.3 0.7 30 112-141 99-129 (266)
155 PRK05870 enoyl-CoA hydratase; 93.2 0.043 9.4E-07 46.9 1.5 30 112-141 90-120 (249)
156 PRK09245 enoyl-CoA hydratase; 93.2 0.048 1E-06 47.0 1.8 29 113-141 99-128 (266)
157 PRK05980 enoyl-CoA hydratase; 93.2 0.044 9.4E-07 47.1 1.5 30 112-141 95-125 (260)
158 PLN02267 enoyl-CoA hydratase/i 93.2 0.036 7.9E-07 47.2 0.9 31 111-141 88-119 (239)
159 PRK07657 enoyl-CoA hydratase; 93.2 0.053 1.2E-06 46.6 2.0 30 112-141 92-122 (260)
160 PRK06144 enoyl-CoA hydratase; 93.2 0.056 1.2E-06 46.6 2.1 29 113-141 98-127 (262)
161 PRK11423 methylmalonyl-CoA dec 93.1 0.05 1.1E-06 46.9 1.8 29 113-141 92-121 (261)
162 PRK09120 p-hydroxycinnamoyl Co 93.1 0.057 1.2E-06 47.0 2.1 30 112-141 99-129 (275)
163 PRK05869 enoyl-CoA hydratase; 93.1 0.052 1.1E-06 45.8 1.7 31 112-142 94-125 (222)
164 PRK05981 enoyl-CoA hydratase; 93.0 0.051 1.1E-06 46.9 1.7 30 112-141 98-128 (266)
165 PRK06495 enoyl-CoA hydratase; 93.0 0.054 1.2E-06 46.6 1.8 30 112-141 92-122 (257)
166 PRK08258 enoyl-CoA hydratase; 93.0 0.052 1.1E-06 47.2 1.7 30 112-141 108-138 (277)
167 PRK07658 enoyl-CoA hydratase; 93.0 0.055 1.2E-06 46.4 1.8 29 113-141 90-119 (257)
168 PRK06142 enoyl-CoA hydratase; 92.9 0.044 9.6E-07 47.4 1.2 30 112-141 104-134 (272)
169 PRK05862 enoyl-CoA hydratase; 92.9 0.039 8.5E-07 47.4 0.8 30 112-141 89-119 (257)
170 PRK07468 enoyl-CoA hydratase; 92.9 0.057 1.2E-06 46.5 1.8 30 112-141 95-125 (262)
171 PLN02600 enoyl-CoA hydratase 92.9 0.059 1.3E-06 46.2 1.8 29 113-141 84-113 (251)
172 TIGR03210 badI 2-ketocyclohexa 92.9 0.055 1.2E-06 46.5 1.6 29 113-141 90-119 (256)
173 PRK05864 enoyl-CoA hydratase; 92.8 0.059 1.3E-06 46.8 1.8 30 112-141 104-134 (276)
174 PRK06190 enoyl-CoA hydratase; 92.8 0.059 1.3E-06 46.5 1.7 29 113-141 90-119 (258)
175 PRK07112 polyketide biosynthes 92.8 0.07 1.5E-06 45.8 2.1 29 113-141 92-121 (255)
176 PRK08260 enoyl-CoA hydratase; 92.8 0.057 1.2E-06 47.5 1.6 30 112-141 108-138 (296)
177 PRK07854 enoyl-CoA hydratase; 92.7 0.06 1.3E-06 46.0 1.6 28 114-141 83-111 (243)
178 PRK08140 enoyl-CoA hydratase; 92.6 0.065 1.4E-06 46.1 1.8 30 112-141 94-124 (262)
179 PRK08290 enoyl-CoA hydratase; 92.6 0.052 1.1E-06 47.6 1.2 31 111-141 112-143 (288)
180 PRK08138 enoyl-CoA hydratase; 92.6 0.068 1.5E-06 46.0 1.9 29 113-141 94-123 (261)
181 PRK06213 enoyl-CoA hydratase; 92.5 0.058 1.3E-06 45.5 1.3 31 112-142 86-117 (229)
182 PRK06210 enoyl-CoA hydratase; 92.5 0.045 9.8E-07 47.4 0.6 31 112-142 103-134 (272)
183 TIGR01929 menB naphthoate synt 92.5 0.063 1.4E-06 46.2 1.5 29 113-141 93-122 (259)
184 PRK07659 enoyl-CoA hydratase; 92.5 0.063 1.4E-06 46.2 1.5 30 112-141 93-123 (260)
185 PRK10949 protease 4; Provision 92.4 0.46 1E-05 46.2 7.5 45 166-211 136-180 (618)
186 TIGR02280 PaaB1 phenylacetate 92.4 0.071 1.5E-06 45.8 1.7 29 113-141 89-118 (256)
187 PRK06127 enoyl-CoA hydratase; 92.4 0.075 1.6E-06 46.0 1.9 30 112-141 101-131 (269)
188 PRK03580 carnitinyl-CoA dehydr 92.4 0.049 1.1E-06 46.9 0.7 29 113-141 90-119 (261)
189 PRK06688 enoyl-CoA hydratase; 92.4 0.074 1.6E-06 45.6 1.8 28 114-141 93-121 (259)
190 PRK07260 enoyl-CoA hydratase; 92.3 0.079 1.7E-06 45.4 1.9 30 112-141 93-123 (255)
191 PRK07799 enoyl-CoA hydratase; 92.3 0.067 1.4E-06 46.1 1.5 29 113-141 96-125 (263)
192 PRK05809 3-hydroxybutyryl-CoA 92.3 0.079 1.7E-06 45.5 1.9 29 113-141 93-122 (260)
193 PRK09674 enoyl-CoA hydratase-i 92.0 0.061 1.3E-06 46.2 0.8 29 113-141 88-117 (255)
194 PRK06563 enoyl-CoA hydratase; 92.0 0.056 1.2E-06 46.4 0.6 28 114-141 89-117 (255)
195 PRK06072 enoyl-CoA hydratase; 92.0 0.08 1.7E-06 45.3 1.6 29 113-141 85-114 (248)
196 PRK07511 enoyl-CoA hydratase; 92.0 0.075 1.6E-06 45.7 1.3 30 112-141 93-123 (260)
197 PRK07110 polyketide biosynthes 92.0 0.086 1.9E-06 45.1 1.7 29 113-141 90-119 (249)
198 PRK07509 enoyl-CoA hydratase; 91.9 0.086 1.9E-06 45.3 1.7 29 113-141 98-127 (262)
199 cd07019 S49_SppA_1 Signal pept 91.9 0.073 1.6E-06 44.5 1.2 26 115-140 68-94 (211)
200 PRK05617 3-hydroxyisobutyryl-C 91.9 0.082 1.8E-06 47.6 1.6 31 112-142 95-126 (342)
201 PRK08788 enoyl-CoA hydratase; 91.9 0.078 1.7E-06 46.6 1.4 27 115-141 119-146 (287)
202 TIGR03200 dearomat_oah 6-oxocy 91.9 0.076 1.6E-06 48.2 1.3 30 112-141 119-149 (360)
203 PLN03214 probable enoyl-CoA hy 91.8 0.087 1.9E-06 46.0 1.6 31 112-142 102-133 (278)
204 COG4799 Acetyl-CoA carboxylase 91.7 0.21 4.6E-06 47.3 4.1 36 175-210 163-199 (526)
205 PLN02888 enoyl-CoA hydratase 91.7 0.062 1.3E-06 46.5 0.6 28 114-141 96-124 (265)
206 PRK07396 dihydroxynaphthoic ac 91.7 0.081 1.7E-06 45.9 1.2 29 113-141 103-132 (273)
207 PRK06494 enoyl-CoA hydratase; 91.5 0.079 1.7E-06 45.6 1.0 27 115-141 92-119 (259)
208 PRK08321 naphthoate synthase; 91.2 0.071 1.5E-06 47.1 0.4 29 113-141 131-160 (302)
209 PLN02921 naphthoate synthase 90.9 0.09 2E-06 47.1 0.8 30 112-141 156-186 (327)
210 COG0777 AccD Acetyl-CoA carbox 90.6 2.4 5.2E-05 37.1 9.1 145 43-214 85-235 (294)
211 PRK14512 ATP-dependent Clp pro 90.5 0.47 1E-05 39.5 4.6 45 167-211 73-119 (197)
212 PRK08252 enoyl-CoA hydratase; 90.2 0.11 2.4E-06 44.5 0.7 27 115-141 89-116 (254)
213 PRK08259 enoyl-CoA hydratase; 90.1 0.12 2.6E-06 44.4 0.9 28 115-142 91-119 (254)
214 PLN02874 3-hydroxyisobutyryl-C 89.9 0.16 3.4E-06 46.4 1.5 30 112-141 100-130 (379)
215 PF01039 Carboxyl_trans: Carbo 89.3 2.4 5.1E-05 40.1 8.9 51 160-210 352-406 (493)
216 TIGR02441 fa_ox_alpha_mit fatt 89.0 0.19 4.1E-06 49.8 1.4 30 112-141 103-133 (737)
217 PRK11730 fadB multifunctional 88.7 0.19 4E-06 49.7 1.1 31 111-141 96-127 (715)
218 PRK11154 fadJ multifunctional 88.7 0.19 4.2E-06 49.5 1.2 30 112-141 96-126 (708)
219 cd07014 S49_SppA Signal peptid 88.2 0.64 1.4E-05 37.5 3.8 73 52-141 23-96 (177)
220 TIGR02437 FadB fatty oxidation 87.9 0.24 5.3E-06 48.9 1.3 30 112-141 97-127 (714)
221 PLN02820 3-methylcrotonyl-CoA 87.5 2.7 5.9E-05 40.5 8.1 51 160-210 424-478 (569)
222 PLN02157 3-hydroxyisobutyryl-C 86.8 0.33 7.1E-06 44.8 1.4 30 112-141 128-158 (401)
223 CHL00028 clpP ATP-dependent Cl 86.3 2.4 5.2E-05 35.3 6.3 48 167-214 80-129 (200)
224 PLN02988 3-hydroxyisobutyryl-C 85.7 0.38 8.3E-06 44.0 1.3 29 113-141 101-130 (381)
225 PLN02851 3-hydroxyisobutyryl-C 84.4 0.57 1.2E-05 43.3 1.8 30 112-141 133-163 (407)
226 cd07023 S49_Sppa_N_C Signal pe 82.3 0.72 1.6E-05 38.2 1.5 73 50-139 16-89 (208)
227 cd07020 Clp_protease_NfeD_1 No 82.0 0.37 8E-06 39.4 -0.4 71 50-141 12-86 (187)
228 COG0447 MenB Dihydroxynaphthoi 81.9 0.53 1.2E-05 40.0 0.5 28 115-142 114-142 (282)
229 TIGR00706 SppA_dom signal pept 80.8 0.73 1.6E-05 38.3 1.0 70 53-140 15-85 (207)
230 TIGR00493 clpP ATP-dependent C 80.4 3.5 7.5E-05 34.0 4.9 46 168-213 77-124 (191)
231 cd07016 S14_ClpP_1 Caseinolyti 79.3 0.68 1.5E-05 36.6 0.3 67 51-140 15-82 (160)
232 cd07018 S49_SppA_67K_type Sign 79.2 0.88 1.9E-05 38.2 1.0 72 50-139 28-100 (222)
233 PRK12551 ATP-dependent Clp pro 78.3 6.8 0.00015 32.5 6.0 46 168-213 76-123 (196)
234 PRK14514 ATP-dependent Clp pro 77.4 4.2 9.2E-05 34.5 4.6 47 167-213 104-152 (221)
235 COG1570 XseA Exonuclease VII, 73.6 13 0.00028 34.8 6.9 43 166-211 216-261 (440)
236 COG0825 AccA Acetyl-CoA carbox 73.5 3.1 6.7E-05 36.7 2.8 43 168-210 181-223 (317)
237 PRK14513 ATP-dependent Clp pro 72.9 7.3 0.00016 32.5 4.8 48 167-214 77-126 (201)
238 cd07022 S49_Sppa_36K_type Sign 63.6 11 0.00023 31.4 4.0 84 26-139 12-96 (214)
239 TIGR00237 xseA exodeoxyribonuc 63.4 14 0.0003 34.4 5.0 44 166-211 210-255 (432)
240 KOG1389|consensus 61.5 10 0.00022 34.2 3.5 37 28-64 363-399 (435)
241 cd00394 Clp_protease_like Case 61.0 1.8 3.8E-05 34.1 -1.1 70 50-139 10-80 (161)
242 PF02601 Exonuc_VII_L: Exonucl 59.5 16 0.00035 32.1 4.7 38 166-205 98-135 (319)
243 PF02803 Thiolase_C: Thiolase, 54.0 6.4 0.00014 30.2 1.0 36 28-63 65-100 (123)
244 cd07015 Clp_protease_NfeD Nodu 50.8 13 0.00029 30.2 2.4 70 50-140 12-85 (172)
245 PRK00286 xseA exodeoxyribonucl 49.9 31 0.00066 31.9 5.0 38 166-205 215-252 (438)
246 COG4799 Acetyl-CoA carboxylase 49.7 52 0.0011 31.6 6.5 54 157-210 379-436 (526)
247 KOG1390|consensus 47.5 21 0.00045 32.2 3.3 49 28-76 337-385 (396)
248 PF06833 MdcE: Malonate decarb 46.7 36 0.00078 29.2 4.5 51 157-207 87-138 (234)
249 PRK12552 ATP-dependent Clp pro 43.8 33 0.00071 29.1 3.8 46 168-213 100-147 (222)
250 COG0740 ClpP Protease subunit 43.7 27 0.00058 29.2 3.2 45 168-212 78-124 (200)
251 PF13607 Succ_CoA_lig: Succiny 40.7 37 0.0008 26.4 3.4 23 55-77 41-63 (138)
252 PF00549 Ligase_CoA: CoA-ligas 38.9 58 0.0013 25.9 4.4 24 55-78 60-83 (153)
253 PF03464 eRF1_2: eRF1 domain 2 34.4 80 0.0017 24.1 4.4 29 50-78 53-83 (133)
254 cd07021 Clp_protease_NfeD_like 33.5 9.8 0.00021 31.0 -0.9 70 50-140 12-82 (178)
255 COG0669 CoaD Phosphopantethein 33.3 53 0.0011 26.5 3.2 59 3-76 10-72 (159)
256 KOG0540|consensus 32.8 1.6E+02 0.0035 27.9 6.7 50 163-212 410-462 (536)
257 KOG1684|consensus 32.5 42 0.00091 30.7 2.8 33 105-137 72-105 (401)
258 PRK06366 acetyl-CoA acetyltran 29.0 49 0.0011 30.1 2.8 33 30-62 330-362 (388)
259 PRK00277 clpP ATP-dependent Cl 25.9 62 0.0013 26.7 2.6 70 50-139 42-112 (200)
260 PRK11778 putative inner membra 25.5 1.1E+02 0.0025 27.5 4.4 25 115-139 152-177 (330)
261 PRK08170 acetyl-CoA acetyltran 25.2 70 0.0015 29.5 3.1 38 29-66 368-405 (426)
262 PF09863 DUF2090: Uncharacteri 24.8 95 0.0021 27.7 3.6 33 44-78 214-246 (311)
263 PRK07189 malonate decarboxylas 23.4 3.6E+02 0.0077 24.0 7.0 80 50-141 86-172 (301)
264 PRK08242 acetyl-CoA acetyltran 23.4 68 0.0015 29.5 2.6 34 29-62 344-377 (402)
265 COG0528 PyrH Uridylate kinase 23.1 2.6E+02 0.0056 24.1 5.8 53 7-79 3-55 (238)
266 PRK03094 hypothetical protein; 22.9 1.1E+02 0.0023 21.8 2.9 21 67-87 34-54 (80)
267 COG0412 Dienelactone hydrolase 22.8 1E+02 0.0022 26.0 3.4 38 162-199 94-133 (236)
268 COG3892 Uncharacterized protei 22.5 3.9E+02 0.0084 23.6 6.8 26 50-77 212-237 (310)
269 COG0183 PaaJ Acetyl-CoA acetyl 20.9 74 0.0016 29.1 2.3 33 30-62 330-362 (392)
270 PF01738 DLH: Dienelactone hyd 20.3 1.2E+02 0.0027 24.5 3.4 41 159-199 77-119 (218)
No 1
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=7.3e-34 Score=247.00 Aligned_cols=149 Identities=30% Similarity=0.450 Sum_probs=123.4
Q ss_pred CCCCCCCCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCc
Q psy8151 1 MASFTPDTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKI 80 (220)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~ 80 (220)
|.+|+. |+++.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.|++
T Consensus 1 ~~~~~~--~~~i~~~~-~~~va~itlnrp~~~Nal~-------------~~m~~el~~al~~~~~d~~vr~vVl~g~g~~ 64 (275)
T PRK09120 1 MSYENR--WDTVKVEV-EDGIAWVTLNRPEKRNAMS-------------PTLNREMIDVLDALEFDDDAGVLVLTGAGDA 64 (275)
T ss_pred CCcccc--cccEEEEE-ECCEEEEEecCcccccCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEEcCCCc
Confidence 556666 88898887 6899999999999999999 9999999999999999999999999999999
Q ss_pred eecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHH
Q psy8151 81 FTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 160 (220)
Q Consensus 81 FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~ 160 (220)
||+|.|++++.... . .+.+ . ....+
T Consensus 65 F~aG~Dl~~~~~~~-----------------------------~-----~~~~-~--------------------~~~~~ 89 (275)
T PRK09120 65 WSAGMDLKEYFRET-----------------------------D-----AQPE-I--------------------LQERI 89 (275)
T ss_pred eecCcCHHHHhhcc-----------------------------c-----cchh-H--------------------HHHHH
Confidence 99999998542100 0 0000 0 00111
Q ss_pred HHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 161 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 161 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
...+++++.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 90 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~ 149 (275)
T PRK09120 90 RREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPG 149 (275)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCC
Confidence 123345677889999999999999999999999999999999999999999999999983
No 2
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.1e-33 Score=241.16 Aligned_cols=142 Identities=38% Similarity=0.611 Sum_probs=119.7
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.|+.+.++. +++|++||||||+++|++| .+|+.+|.+++++++.|+++|+|||+|+|++||+|.|+
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl 67 (262)
T PRK05995 2 MYETLEIEQ-RGQVATVTLNRPDVRNAFN-------------ETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADL 67 (262)
T ss_pred CCceEEEEe-eCCEEEEEEcCcccccCCC-------------HHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCH
Confidence 477788887 7899999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++.... ..+ ... . ......++++
T Consensus 68 ~~~~~~~------------------------------------~~~------~~~------~--------~~~~~~~~~~ 91 (262)
T PRK05995 68 NWMKKMA------------------------------------GYS------DDE------N--------RADARRLADM 91 (262)
T ss_pred HHHhhhc------------------------------------ccC------chh------h--------hhHHHHHHHH
Confidence 8643100 000 000 0 0011234566
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 92 ~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 143 (262)
T PRK05995 92 LRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIP 143 (262)
T ss_pred HHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCc
Confidence 7788999999999999999999999999999999999999999999999988
No 3
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=3.2e-33 Score=240.46 Aligned_cols=140 Identities=41% Similarity=0.649 Sum_probs=121.6
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.+..+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|+|++||+|.|+
T Consensus 3 ~~~~~~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl 68 (257)
T COG1024 3 TYETILVER-EDGIAVITLNRPEKLNALN-------------LEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADL 68 (257)
T ss_pred CCCeeEEEe-eCCEEEEEecCcccccCCC-------------HHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCH
Confidence 456677777 5669999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++.. .+.. .....+....+.+
T Consensus 69 ~~~~~---------------------------------------------~~~~-------------~~~~~~~~~~~~~ 90 (257)
T COG1024 69 KELLS---------------------------------------------PEDG-------------NAAENLMQPGQDL 90 (257)
T ss_pred HHHhc---------------------------------------------ccch-------------hHHHHHHhHHHHH
Confidence 86541 0000 0011345566778
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 91 ~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~P 142 (257)
T COG1024 91 LRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLP 142 (257)
T ss_pred HHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCC
Confidence 9999999999999999999999999999999999999999999999999998
No 4
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5e-33 Score=240.84 Aligned_cols=143 Identities=27% Similarity=0.451 Sum_probs=120.6
Q ss_pred CCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCC
Q psy8151 7 DTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLD 86 (220)
Q Consensus 7 ~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~D 86 (220)
..|+++.++.++++|++|+||||+++|+++ .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|
T Consensus 8 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~D 74 (268)
T PRK07327 8 ADYPALRFDRPPPGVLEIVLNGPGALNAAD-------------ARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGD 74 (268)
T ss_pred CCCCeEEEEecCCCEEEEEEcCCCccCCCC-------------HHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccC
Confidence 457888888756789999999999999999 9999999999999999999999999999999999999
Q ss_pred cccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q psy8151 87 LSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 166 (220)
Q Consensus 87 l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (220)
++++.... .. . .....++..+++
T Consensus 75 l~~~~~~~-----------------------------------~~----------~------------~~~~~~~~~~~~ 97 (268)
T PRK07327 75 LALVEEMA-----------------------------------DD----------F------------EVRARVWREARD 97 (268)
T ss_pred HHHHhhcc-----------------------------------Cc----------H------------HHHHHHHHHHHH
Confidence 98533100 00 0 000112233456
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
++.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 98 ~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 150 (268)
T PRK07327 98 LVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAA 150 (268)
T ss_pred HHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCC
Confidence 67788899999999999999999999999999999999999999999999987
No 5
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.5e-33 Score=242.38 Aligned_cols=143 Identities=29% Similarity=0.407 Sum_probs=119.3
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.|+++.++.+.++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|+|++||+|.|+
T Consensus 3 ~~~~l~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl 69 (265)
T PRK05674 3 DFQTIELIRDPRGFATLWLSRADKNNAFN-------------AQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADL 69 (265)
T ss_pred CcceEEEEEcCCCEEEEEecCcccccCCC-------------HHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCH
Confidence 37888888745789999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++.... + .+ ... . ......++++
T Consensus 70 ~~~~~~~-----------------------------~-------~~------~~~------~--------~~~~~~~~~~ 93 (265)
T PRK05674 70 AWMQQSA-----------------------------D-------LD------YNT------N--------LDDARELAEL 93 (265)
T ss_pred HHHhhcc-----------------------------c-------cc------chh------h--------hHHHHHHHHH
Confidence 8543100 0 00 000 0 0001123456
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 94 ~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p 145 (265)
T PRK05674 94 MYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAP 145 (265)
T ss_pred HHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCc
Confidence 7788899999999999999999999999999999999999999999999998
No 6
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-33 Score=241.43 Aligned_cols=150 Identities=41% Similarity=0.677 Sum_probs=122.6
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.|+.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|+
T Consensus 4 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl 69 (272)
T PRK06142 4 TYESFTVEL-ADHVAQVTLNRPGKGNAMN-------------PAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDL 69 (272)
T ss_pred CcceEEEEe-cCCEEEEEEcCCCccCCCC-------------HHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCH
Confidence 467788887 7899999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++..... ..... .. .. . ......+...++++
T Consensus 70 ~~~~~~~~-------------------------------~~~~~------~~-~~------~----~~~~~~~~~~~~~~ 101 (272)
T PRK06142 70 PAMAGVFG-------------------------------QLGKD------GL-AR------P----RTDLRREILRLQAA 101 (272)
T ss_pred HHHhhhcc-------------------------------ccccc------cc-cc------c----hHHHHHHHHHHHHH
Confidence 86531000 00000 00 00 0 01122334456677
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 102 ~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p 153 (272)
T PRK06142 102 INAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVA 153 (272)
T ss_pred HHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCC
Confidence 8889999999999999999999999999999999999999999999999988
No 7
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=7.5e-33 Score=239.55 Aligned_cols=140 Identities=30% Similarity=0.525 Sum_probs=118.6
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.-+.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.|++||+|.|+
T Consensus 9 ~~~~~~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl 74 (266)
T PRK08139 9 EAPLLLRED-RDGVATLTLNRPQAFNALS-------------EAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDL 74 (266)
T ss_pred cCCceEEEe-eCCEEEEEeCCcccccCCC-------------HHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCH
Confidence 345566666 7899999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++... . . . .....++..++++
T Consensus 75 ~~~~~~--------------------------------~----~----------~------------~~~~~~~~~~~~~ 96 (266)
T PRK08139 75 KEMRAA--------------------------------R----G----------L------------AYFRALFARCSRV 96 (266)
T ss_pred HHHhcc--------------------------------c----c----------h------------hHHHHHHHHHHHH
Confidence 753200 0 0 0 0011223445667
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 97 ~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 148 (266)
T PRK08139 97 MQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFC 148 (266)
T ss_pred HHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCC
Confidence 8889999999999999999999999999999999999999999999999987
No 8
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.6e-33 Score=238.63 Aligned_cols=138 Identities=31% Similarity=0.496 Sum_probs=116.8
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.|+.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|+
T Consensus 2 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl 67 (257)
T PRK05862 2 AYETILVET-RGRVGLITLNRPKALNALN-------------DALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADI 67 (257)
T ss_pred CCceEEEEe-eCCEEEEEEcCCcccCCCC-------------HHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcCh
Confidence 356688876 6889999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++... + ..+ .+...+.++
T Consensus 68 ~~~~~~---------------------------------------~------~~~----------------~~~~~~~~~ 86 (257)
T PRK05862 68 KEMADL---------------------------------------S------FMD----------------VYKGDYITN 86 (257)
T ss_pred HhHhcc---------------------------------------c------hhH----------------HHHHHHHHH
Confidence 853210 0 000 000112235
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
+.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 87 ~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~ 139 (257)
T PRK05862 87 WEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPG 139 (257)
T ss_pred HHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCC
Confidence 66788999999999999999999999999999999999999999999999983
No 9
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.4e-33 Score=239.41 Aligned_cols=142 Identities=32% Similarity=0.474 Sum_probs=118.2
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLS 88 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~ 88 (220)
|+.+.++...++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~ 69 (262)
T PRK07468 3 FETIRIAVDARGVATLTLNRPEKHNALS-------------ARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLG 69 (262)
T ss_pred cceEEEEEcCCcEEEEEEcCcccccCCC-------------HHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHH
Confidence 6678888744689999999999999999 999999999999999999999999999999999999998
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++.+.. ... .. . .......++.++
T Consensus 70 ~~~~~~----------------------------------~~~---------~~------~-------~~~~~~~~~~~~ 93 (262)
T PRK07468 70 WMRAQM----------------------------------TAD---------RA------T-------RIEEARRLAMML 93 (262)
T ss_pred HHHhhc----------------------------------ccc---------hh------h-------HHHHHHHHHHHH
Confidence 543100 000 00 0 000112345567
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.+|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 94 ~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p 144 (262)
T PRK07468 94 KALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIP 144 (262)
T ss_pred HHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCc
Confidence 788999999999999999999999999999999999999999999999988
No 10
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=1.1e-32 Score=237.53 Aligned_cols=140 Identities=34% Similarity=0.514 Sum_probs=119.6
Q ss_pred CCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCC
Q psy8151 7 DTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGL 85 (220)
Q Consensus 7 ~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~ 85 (220)
++|+.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|+| ++||+|.
T Consensus 1 ~~~~~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~ 66 (260)
T PRK05809 1 MELKNVILEK-EGHIAVVTINRPKALNALN-------------SETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGA 66 (260)
T ss_pred CCcceEEEEE-eCCEEEEEECCCcccCCCC-------------HHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCc
Confidence 4578888887 7899999999999999999 99999999999999999999999999999 9999999
Q ss_pred CcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q psy8151 86 DLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 165 (220)
Q Consensus 86 Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (220)
|++++.... . . + ...+....+
T Consensus 67 Dl~~~~~~~------------------------------------~----------~------~-------~~~~~~~~~ 87 (260)
T PRK05809 67 DISEMKDLN------------------------------------E----------E------E-------GRKFGLLGN 87 (260)
T ss_pred ChHhHhccC------------------------------------h----------H------H-------HHHHHHHHH
Confidence 998532100 0 0 0 001122234
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+++.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 88 ~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p 141 (260)
T PRK05809 88 KVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITP 141 (260)
T ss_pred HHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCC
Confidence 567788999999999999999999999999999999999999999999999988
No 11
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-32 Score=236.64 Aligned_cols=137 Identities=28% Similarity=0.488 Sum_probs=116.8
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCcc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLS 88 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~ 88 (220)
.++.++..+++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.| ++||+|.|++
T Consensus 6 ~~~~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~ 72 (256)
T PRK06143 6 AHAGVTRDDRGVATLTIRNAGSLNILG-------------TPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIK 72 (256)
T ss_pred ccceeeecCCCEEEEEEcCCcccCCCC-------------HHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHH
Confidence 346777667899999999999999999 99999999999999999999999999999 7999999998
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++... + . .....+...+++++
T Consensus 73 ~~~~~---------------------------------------------~--~------------~~~~~~~~~~~~~~ 93 (256)
T PRK06143 73 EMATL---------------------------------------------D--Q------------ASAEAFISRLRDLC 93 (256)
T ss_pred HHhhc---------------------------------------------C--h------------hhHHHHHHHHHHHH
Confidence 53210 0 0 00112234456677
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccc
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKW 218 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~ 218 (220)
.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++
T Consensus 94 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~p 143 (256)
T PRK06143 94 DAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGIP 143 (256)
T ss_pred HHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCCC
Confidence 88999999999999999999999999999999999999999999999983
No 12
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-32 Score=236.94 Aligned_cols=140 Identities=33% Similarity=0.537 Sum_probs=117.3
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSG 89 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~~ 89 (220)
.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.| ++||+|.|+++
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~ 69 (260)
T PRK05980 4 TVLIEI-RDGIALLTLNRPEKLNALN-------------YALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHE 69 (260)
T ss_pred eEEEEE-ECCEEEEEECCcccccCCC-------------HHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHH
Confidence 467776 7899999999999999999 99999999999999999999999999999 79999999985
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+..... .. . + .....+...+++++.
T Consensus 70 ~~~~~~----------------------------------~~----------~------~-----~~~~~~~~~~~~~~~ 94 (260)
T PRK05980 70 FSASVA----------------------------------AG----------A------D-----VALRDFVRRGQAMTA 94 (260)
T ss_pred Hhhhcc----------------------------------cc----------c------h-----hhHHHHHHHHHHHHH
Confidence 431000 00 0 0 001123334456777
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 95 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p 144 (260)
T PRK05980 95 RLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPP 144 (260)
T ss_pred HHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCC
Confidence 88999999999999999999999999999999999999999999999988
No 13
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-32 Score=236.45 Aligned_cols=142 Identities=35% Similarity=0.510 Sum_probs=117.5
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.|+.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++ |+++|+|||+|.|++||+|.|+
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl 66 (262)
T PRK08140 2 MYETILLAI-EAGVATLTLNRPDKLNSFT-------------REMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDL 66 (262)
T ss_pred CCceEEEEe-ECCEEEEEecCCcccCCCC-------------HHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcCh
Confidence 466788887 7899999999999999999 999999999999999 9999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++.... .+ ...+. ...+...++.+
T Consensus 67 ~~~~~~~-----------------------------~~----~~~~~----------------------~~~~~~~~~~~ 91 (262)
T PRK08140 67 ADRDVTP-----------------------------GG----AMPDL----------------------GESIETFYNPL 91 (262)
T ss_pred HHHhccc-----------------------------cc----cchhh----------------------HHHHHHHHHHH
Confidence 8532100 00 00000 00111223456
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 92 ~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p 143 (262)
T PRK08140 92 VRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVP 143 (262)
T ss_pred HHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCC
Confidence 7788899999999999999999999999999999999999999999999987
No 14
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=1.1e-32 Score=237.36 Aligned_cols=137 Identities=28% Similarity=0.428 Sum_probs=116.2
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDL 87 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl 87 (220)
|+++.++. +++|++||||||+++|++| .+|+.+|.++++.++.|+++|+|||+|+| ++||+|.|+
T Consensus 1 ~~~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl 66 (256)
T TIGR03210 1 YEDILYEK-RNGIAWIMINRPAKMNAFR-------------GQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQ 66 (256)
T ss_pred CCceEEEe-eCCEEEEEEcCCccccCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCh
Confidence 56788887 7899999999999999999 99999999999999999999999999999 799999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++... .+ .. . .+...++++
T Consensus 67 ~~~~~~--------------------------------------~~-------~~------~---------~~~~~~~~~ 86 (256)
T TIGR03210 67 STHDGG--------------------------------------YD-------GR------G---------TIGLPMEEL 86 (256)
T ss_pred HHHhcc--------------------------------------cc-------ch------h---------HHHHHHHHH
Confidence 853200 00 00 0 000123456
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 87 ~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~ 138 (256)
T TIGR03210 87 HSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVD 138 (256)
T ss_pred HHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccC
Confidence 7788899999999999999999999999999999999999999999999885
No 15
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-32 Score=238.57 Aligned_cols=147 Identities=30% Similarity=0.505 Sum_probs=119.9
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
+++.+.++..+++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|+
T Consensus 7 ~~~~v~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl 73 (276)
T PRK05864 7 TMSLVLVDHPRPEIALITLNRPERMNSMA-------------FDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADH 73 (276)
T ss_pred CCCceEEeeecCCEEEEEecCCccccCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcch
Confidence 45667777657899999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++... . . ..+. .. .. ........++++
T Consensus 74 ~~~~~~-----------------------~------~----~~~~--------~~-----~~------~~~~~~~~~~~~ 101 (276)
T PRK05864 74 KSAGVV-----------------------P------H----VEGL--------TR-----PT------YALRSMELLDDV 101 (276)
T ss_pred hhhhcc-----------------------c------c----cccc--------cc-----hh------HHHHHHHHHHHH
Confidence 854210 0 0 0000 00 00 001122345566
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 102 ~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p 153 (276)
T PRK05864 102 ILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTA 153 (276)
T ss_pred HHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCC
Confidence 7788899999999999999999999999999999999999999999999986
No 16
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-32 Score=236.09 Aligned_cols=138 Identities=31% Similarity=0.524 Sum_probs=116.7
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLS 88 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~ 88 (220)
.+++.++.++++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.|+.||+|.|++
T Consensus 6 ~~~~~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~ 72 (261)
T PRK08138 6 TDVVLLERPADGVALLRLNRPEARNALN-------------MEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIK 72 (261)
T ss_pred CCCEEEEEccCCEEEEEEcCCcccCCCC-------------HHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHH
Confidence 3446777657899999999999999999 999999999999999999999999999999999999997
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++... . . .. .+...+++++
T Consensus 73 ~~~~~------------------------------~------~---------~~----------------~~~~~~~~~~ 91 (261)
T PRK08138 73 EFATA------------------------------G------A---------IE----------------MYLRHTERYW 91 (261)
T ss_pred HHhcc------------------------------c------h---------hH----------------HHHHHHHHHH
Confidence 53210 0 0 00 0011234456
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 92 ~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~ 143 (261)
T PRK08138 92 EAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPG 143 (261)
T ss_pred HHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCC
Confidence 7788999999999999999999999999999999999999999999999883
No 17
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=1.5e-32 Score=238.72 Aligned_cols=142 Identities=43% Similarity=0.759 Sum_probs=116.1
Q ss_pred ecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchh
Q psy8151 17 PKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQE 96 (220)
Q Consensus 17 ~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~ 96 (220)
++++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++.+...
T Consensus 14 ~~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~- 79 (275)
T PLN02664 14 PNSSVFHLNLNRPSQRNALS-------------LDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISE- 79 (275)
T ss_pred CCCCEEEEEECCCCccCCCC-------------HHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhccc-
Confidence 37899999999999999999 9999999999999999999999999999999999999986431000
Q ss_pred hhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q psy8151 97 IAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPK 176 (220)
Q Consensus 97 ~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k 176 (220)
.. .+.+ .. ......+.+...+++++.+|.++||
T Consensus 80 ---------------------------~~----~~~~------~~----------~~~~~~~~~~~~~~~~~~~l~~~~k 112 (275)
T PLN02664 80 ---------------------------QS----SSGD------RG----------RSGERLRRKIKFLQDAITAIEQCRK 112 (275)
T ss_pred ---------------------------cc----cccc------ch----------hhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 00 0000 00 0001122334455677888999999
Q ss_pred cEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 177 PVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 177 p~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 113 PvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p 155 (275)
T PLN02664 113 PVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITA 155 (275)
T ss_pred CEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCC
Confidence 9999999999999999999999999999999999999999987
No 18
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-32 Score=236.06 Aligned_cols=142 Identities=28% Similarity=0.410 Sum_probs=119.3
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLS 88 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~ 88 (220)
|+++.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+||++|.|++||+|.|++
T Consensus 1 ~~~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~ 66 (255)
T PRK07260 1 FEHIIYEV-EDDLATLTLNRPEVSNGFN-------------IPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLV 66 (255)
T ss_pred CCceEEEE-ECCEEEEEeCCcccccCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHH
Confidence 45677877 6899999999999999999 999999999999999999999999999999999999998
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++.... + .+ +. .....+...+++++
T Consensus 67 ~~~~~~-----------------------------~-----~~-~~--------------------~~~~~~~~~~~~~~ 91 (255)
T PRK07260 67 EMKRAV-----------------------------D-----ED-DV--------------------QSLVKIAELVNEIS 91 (255)
T ss_pred HHHhhc-----------------------------c-----cc-ch--------------------hhHHHHHHHHHHHH
Confidence 643100 0 00 00 00112233456677
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 92 ~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p 142 (255)
T PRK07260 92 FAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAP 142 (255)
T ss_pred HHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCC
Confidence 889999999999999999999999999999999999999999999999987
No 19
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-32 Score=234.57 Aligned_cols=137 Identities=26% Similarity=0.439 Sum_probs=115.4
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~ 69 (249)
T PRK05870 4 PVLLDV-DDGVALITVNDPDRRNAVT-------------AEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTAL 69 (249)
T ss_pred cEEEEc-cCCEEEEEEcCCCccCCCC-------------HHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHH
Confidence 466776 7899999999999999999 99999999999999999999999999999999999999864
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
.+... .. . . +.+..+.+.+.+
T Consensus 70 ~~~~~-----------------------------~~-------~-------~----------------~~~~~~~~~~~~ 90 (249)
T PRK05870 70 GAAPG-----------------------------RP-------A-------E----------------DGLRRIYDGFLA 90 (249)
T ss_pred hcccc-----------------------------cc-------h-------H----------------HHHHHHHHHHHH
Confidence 31000 00 0 0 011223344667
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 91 l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~ 140 (249)
T PRK05870 91 VASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPG 140 (249)
T ss_pred HHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCC
Confidence 88999999999999999999999999999999999999999999999883
No 20
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-32 Score=235.07 Aligned_cols=145 Identities=32% Similarity=0.502 Sum_probs=119.1
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLS 88 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~ 88 (220)
++++.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++
T Consensus 2 ~~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~ 67 (262)
T PRK07509 2 MDRVSVTI-EDGIADVRLNRPDKMNALD-------------FAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVK 67 (262)
T ss_pred CceEEEEe-eCCEEEEEecCcccccCCC-------------HHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHH
Confidence 46788887 7899999999999999999 999999999999999999999999999999999999998
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++.... + . +.... ..........+++++
T Consensus 68 ~~~~~~------------------------------~-----~-~~~~~----------------~~~~~~~~~~~~~~~ 95 (262)
T PRK07509 68 SVASSP------------------------------G-----N-AVKLL----------------FKRLPGNANLAQRVS 95 (262)
T ss_pred HHhccc------------------------------c-----h-hhhhH----------------hhhhHHHHHHHHHHH
Confidence 643100 0 0 00000 000111122345567
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 96 ~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p 146 (262)
T PRK07509 96 LGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVP 146 (262)
T ss_pred HHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCC
Confidence 778899999999999999999999999999999999999999999999988
No 21
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-32 Score=235.27 Aligned_cols=139 Identities=31% Similarity=0.544 Sum_probs=117.9
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCcc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLS 88 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~ 88 (220)
+++.++..+++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.| ++||+|.|++
T Consensus 3 ~~v~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~ 69 (260)
T PRK07657 3 QNISVDYVTPHVVKITLNRPRAANALS-------------LALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLK 69 (260)
T ss_pred ceEEEEEccCCEEEEEEeCCcccCCCC-------------HHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChH
Confidence 467777657899999999999999999 99999999999999999999999999999 5999999997
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++... + . .+ ...+...+++++
T Consensus 70 ~~~~~---------------------------------------------~--~-----~~-------~~~~~~~~~~~~ 90 (260)
T PRK07657 70 ERAGM---------------------------------------------N--E-----EQ-------VRHAVSLIRTTM 90 (260)
T ss_pred hhhcC---------------------------------------------C--h-----hh-------HHHHHHHHHHHH
Confidence 53200 0 0 00 111223445677
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 91 ~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~ 142 (260)
T PRK07657 91 EMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPG 142 (260)
T ss_pred HHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCC
Confidence 8889999999999999999999999999999999999999999999999883
No 22
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=2.1e-32 Score=235.29 Aligned_cols=134 Identities=29% Similarity=0.455 Sum_probs=114.3
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
.+.++. +++|++||||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++
T Consensus 3 ~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~ 68 (255)
T PRK09674 3 ELLVSR-QQRVLLLTLNRPEARNALN-------------NALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEM 68 (255)
T ss_pred eEEEEe-ECCEEEEEEcCCCccCCCC-------------HHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhH
Confidence 456666 7899999999999999999 99999999999999999999999999999999999999853
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
... +.. . .+...+.+++.+
T Consensus 69 ~~~---------------------------------------~~~------~----------------~~~~~~~~~~~~ 87 (255)
T PRK09674 69 AEK---------------------------------------DLA------A----------------TLNDPRPQLWQR 87 (255)
T ss_pred hcc---------------------------------------chh------h----------------hHHHHHHHHHHH
Confidence 210 000 0 000112345667
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 88 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p 136 (255)
T PRK09674 88 LQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMP 136 (255)
T ss_pred HHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCC
Confidence 8899999999999999999999999999999999999999999999988
No 23
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-32 Score=234.71 Aligned_cols=135 Identities=31% Similarity=0.496 Sum_probs=114.2
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG 89 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~ 89 (220)
+.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++ +++|+|||+|.|++||+|.|+++
T Consensus 2 ~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~ 65 (255)
T PRK08150 2 SLVSYEL-DGGVATIGLNRPAKRNALN-------------DGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSE 65 (255)
T ss_pred ceEEEEe-eCCEEEEEEcCCccccCCC-------------HHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHH
Confidence 4567776 6889999999999999999 999999999999997 78999999999999999999985
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+... . . + . ...+...+++++.
T Consensus 66 ~~~~------------------------------~------~-~--------~--------------~~~~~~~~~~~~~ 86 (255)
T PRK08150 66 LRER------------------------------D------A-G--------E--------------GMHHSRRWHRVFD 86 (255)
T ss_pred Hhhc------------------------------c------c-h--------h--------------HHHHHHHHHHHHH
Confidence 4310 0 0 0 0 0011223455677
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 87 ~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p 136 (255)
T PRK08150 87 KIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFV 136 (255)
T ss_pred HHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCC
Confidence 88999999999999999999999999999999999999999999999987
No 24
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-32 Score=235.03 Aligned_cols=139 Identities=27% Similarity=0.378 Sum_probs=118.5
Q ss_pred CCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCC
Q psy8151 7 DTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLD 86 (220)
Q Consensus 7 ~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~D 86 (220)
++++.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|
T Consensus 1 ~~~~~v~~~~-~~~va~Itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~D 66 (258)
T PRK06190 1 MTEPILLVET-HDRVRTLTLNRPEARNALS-------------AALRRALFAALAEADADDDVDVVVLTGADPAFCAGLD 66 (258)
T ss_pred CCCceEEEEe-eCCEEEEEEcCCcccCCCC-------------HHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcC
Confidence 3566788887 7899999999999999999 9999999999999999999999999999999999999
Q ss_pred cccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q psy8151 87 LSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 166 (220)
Q Consensus 87 l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (220)
++++.+. ..+ . . . ...+++
T Consensus 67 l~~~~~~-------------------------------------~~~--------~------~-----~-----~~~~~~ 85 (258)
T PRK06190 67 LKELGGD-------------------------------------GSA--------Y------G-----A-----QDALPN 85 (258)
T ss_pred HHHHhcc-------------------------------------cch--------h------h-----H-----HHHHHH
Confidence 9854310 000 0 0 0 012344
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|.
T Consensus 86 ~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~ 139 (258)
T PRK06190 86 PSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPG 139 (258)
T ss_pred HHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCC
Confidence 567788999999999999999999999999999999999999999999999983
No 25
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=3.3e-32 Score=233.33 Aligned_cols=133 Identities=26% Similarity=0.409 Sum_probs=114.0
Q ss_pred EEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccccc
Q psy8151 12 LVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGML 91 (220)
Q Consensus 12 ~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~ 91 (220)
+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|+.||+|.|++++.
T Consensus 2 i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~ 67 (248)
T PRK06072 2 IKVES-REGYAIVTMSRPDKLNALN-------------LEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFA 67 (248)
T ss_pred eEEEE-ECCEEEEEECCcccccCCC-------------HHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHh
Confidence 34555 7899999999999999999 999999999999999999999999999999999999997432
Q ss_pred ccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8151 92 SLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL 171 (220)
Q Consensus 92 ~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (220)
. . . .. .+...++.++..+
T Consensus 68 ~----------------------~------------------~------~~----------------~~~~~~~~~~~~l 85 (248)
T PRK06072 68 P----------------------D------------------F------AI----------------DLRETFYPIIREI 85 (248)
T ss_pred h----------------------h------------------h------HH----------------HHHHHHHHHHHHH
Confidence 0 0 0 00 0112244567778
Q ss_pred hcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 172 ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 172 ~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 86 ~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~ 134 (248)
T PRK06072 86 RFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASD 134 (248)
T ss_pred HhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCC
Confidence 8999999999999999999999999999999999999999999999873
No 26
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=4.8e-32 Score=233.64 Aligned_cols=142 Identities=25% Similarity=0.345 Sum_probs=119.2
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
....+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.|++||+|.|+
T Consensus 4 ~~~~i~~~~-~~~v~~i~lnrp~~~Nal~-------------~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl 69 (260)
T PRK07827 4 VDTLVRYAV-DGGVATLTLDSPHNRNALS-------------ARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADL 69 (260)
T ss_pred CCcceEEEe-eCCEEEEEEcCccccCCCC-------------HHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcCh
Confidence 355677776 7899999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++... .. + . .+ ....+...+.++
T Consensus 70 ~~~~~~-------------------------------------~~------~--~-----~~------~~~~~~~~~~~~ 93 (260)
T PRK07827 70 SEAGGG-------------------------------------GG------D--P-----YD------AAVARAREMTAL 93 (260)
T ss_pred HHHhhc-------------------------------------cc------C--c-----hh------HHHHHHHHHHHH
Confidence 854310 00 0 0 00 001122345567
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.++||||||+|||+|+|||++++++||+||++++++|++||+++|++|
T Consensus 94 ~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 145 (260)
T PRK07827 94 LRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAP 145 (260)
T ss_pred HHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCC
Confidence 7889999999999999999999999999999999999999999999999988
No 27
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=4.2e-32 Score=234.09 Aligned_cols=138 Identities=28% Similarity=0.429 Sum_probs=118.1
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLS 88 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~ 88 (220)
++++.++. +++|++|+||||+++|++| .+|+.+|.++++++ .|+++|+|||+|.|++||+|.|++
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~ 69 (260)
T PRK07659 5 MESVVVKY-EGRVATIMLNRPEALNALD-------------EPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIK 69 (260)
T ss_pred CceEEEEe-eCCEEEEEeCCcccccCCC-------------HHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHH
Confidence 45688887 7899999999999999999 99999999999999 589999999999999999999998
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++... . + .. ....+...+++++
T Consensus 70 ~~~~~------------------------------~--------------~-~~-------------~~~~~~~~~~~~~ 91 (260)
T PRK07659 70 MMLSS------------------------------N--------------D-ES-------------KFDGVMNTISEIV 91 (260)
T ss_pred HHhhc------------------------------c--------------C-ch-------------hHHHHHHHHHHHH
Confidence 53210 0 0 00 0112334556778
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 92 ~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 142 (260)
T PRK07659 92 VTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIP 142 (260)
T ss_pred HHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCC
Confidence 889999999999999999999999999999999999999999999999998
No 28
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=4.3e-32 Score=238.11 Aligned_cols=156 Identities=32% Similarity=0.345 Sum_probs=120.1
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
+|+.+.++. +++|++|+||||+++|++| .+|+.+|.++|+.++.|+++|+|||+|.|++||+|.|+
T Consensus 2 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl 67 (296)
T PRK08260 2 TYETIRYDV-ADGIATITLNRPDKLNAFT-------------VTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADL 67 (296)
T ss_pred CcceEEEee-eCCEEEEEeCCCcccCCCC-------------HHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcCh
Confidence 467788887 7899999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++....... ....+. . ...+ ... + .....+...++++
T Consensus 68 ~~~~~~~~~~-----------------~~~~~~-------~-~~~~------~~~------~-----~~~~~~~~~~~~~ 105 (296)
T PRK08260 68 SAGGNTFDLD-----------------APRTPV-------E-ADEE------DRA------D-----PSDDGVRDGGGRV 105 (296)
T ss_pred HHhhhccccc-----------------cccccc-------c-cccc------ccc------c-----hhHHHHHHHHHHH
Confidence 8643100000 000000 0 0000 000 0 0001112234456
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.+|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 106 ~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p 157 (296)
T PRK08260 106 TLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVP 157 (296)
T ss_pred HHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCC
Confidence 7788999999999999999999999999999999999999999999999988
No 29
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=4e-32 Score=234.77 Aligned_cols=146 Identities=27% Similarity=0.431 Sum_probs=120.3
Q ss_pred CCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCC-cceEEEEecCCCceecCC
Q psy8151 7 DTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENE-ECRVIILSAAGKIFTAGL 85 (220)
Q Consensus 7 ~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~-~~rvvvl~g~G~~FsaG~ 85 (220)
++|+.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+ ++|+|||+|.|+.||+|.
T Consensus 1 ~~~~~v~~~~-~~~i~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~ 66 (266)
T PRK05981 1 MQFKKVTLDF-DGGVAILTLDHPEVMNAVS-------------IDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGA 66 (266)
T ss_pred CCcceEEEEe-ECCEEEEEecCcccccCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccccc
Confidence 4688898887 6899999999999999999 999999999999999876 599999999999999999
Q ss_pred CcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q psy8151 86 DLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 165 (220)
Q Consensus 86 Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (220)
|++++..... . ...+.+ ....+...++
T Consensus 67 Dl~~~~~~~~----------------------------~---~~~~~~----------------------~~~~~~~~~~ 93 (266)
T PRK05981 67 NLQGRGSGGR----------------------------E---SDSGGD----------------------AGAALETAYH 93 (266)
T ss_pred CHHhhhcccc----------------------------c---ccccch----------------------hHHHHHHHHH
Confidence 9986431000 0 000000 0011123345
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 94 ~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p 147 (266)
T PRK05981 94 PFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVP 147 (266)
T ss_pred HHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCC
Confidence 677889999999999999999999999999999999999999999999999998
No 30
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=3.3e-32 Score=235.99 Aligned_cols=150 Identities=30% Similarity=0.444 Sum_probs=120.5
Q ss_pred CCcceEEEEeecC-cEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCC
Q psy8151 7 DTYKTLVVHVPKQ-FVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGL 85 (220)
Q Consensus 7 ~~~~~~~~~~~~~-~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~ 85 (220)
++|+.+.++. ++ +|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.
T Consensus 2 ~~~~~i~~~~-~~~~v~~itlnrp~~~Nal~-------------~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~ 67 (272)
T PRK06210 2 MAYDAVLYEV-ADSGVAVITLNRPDRLNAWT-------------PVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGA 67 (272)
T ss_pred CCcceEEEEE-CCCCEEEEEeCCcccccCCC-------------HHHHHHHHHHHHHhccCCCeeEEEEECCCCCccccc
Confidence 5688898987 66 99999999999999999 999999999999999999999999999999999999
Q ss_pred CcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q psy8151 86 DLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 165 (220)
Q Consensus 86 Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (220)
|++++...... .. . ....... ........++
T Consensus 68 Dl~~~~~~~~~------------------~~--------~----~~~~~~~-------------------~~~~~~~~~~ 98 (272)
T PRK06210 68 DMGELQTIDPS------------------DG--------R----RDTDVRP-------------------FVGNRRPDYQ 98 (272)
T ss_pred CHHHHhccCcc------------------cc--------c----ccccchh-------------------hhhhhhhhHH
Confidence 99865421000 00 0 0000000 0000011234
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+++.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 99 ~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p 152 (272)
T PRK06210 99 TRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIA 152 (272)
T ss_pred HHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCC
Confidence 556788899999999999999999999999999999999999999999999987
No 31
>PRK05869 enoyl-CoA hydratase; Validated
Probab=99.98 E-value=3.2e-32 Score=229.99 Aligned_cols=138 Identities=25% Similarity=0.398 Sum_probs=115.6
Q ss_pred cceEEEEee----cCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecC
Q psy8151 9 YKTLVVHVP----KQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAG 84 (220)
Q Consensus 9 ~~~~~~~~~----~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG 84 (220)
|+++.++.. +++|++|+||||++ |++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG 67 (222)
T PRK05869 2 NEFVNVVVSDGSQDAGLATLLLSRPPT-NALT-------------RQVYREIVAAANELGRRDDVAAVILYGGHEIFSAG 67 (222)
T ss_pred ccchhhhcccCcccCCEEEEEECCCCC-CCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcC
Confidence 445555554 58999999999985 9999 99999999999999999999999999999999999
Q ss_pred CCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHH
Q psy8151 85 LDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 164 (220)
Q Consensus 85 ~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (220)
.|++++... ...+ ...+...+
T Consensus 68 ~Dl~~~~~~------------------------------------~~~~-----------------------~~~~~~~~ 88 (222)
T PRK05869 68 DDMPELRTL------------------------------------SAQE-----------------------ADTAARVR 88 (222)
T ss_pred cCHHHHhcc------------------------------------Chhh-----------------------HHHHHHHH
Confidence 999853210 0000 00111234
Q ss_pred HHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 165 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 165 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
++++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 89 ~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 143 (222)
T PRK05869 89 QQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAP 143 (222)
T ss_pred HHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCC
Confidence 5677889999999999999999999999999999999999999999999999987
No 32
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=4.7e-32 Score=233.63 Aligned_cols=140 Identities=29% Similarity=0.416 Sum_probs=118.4
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++
T Consensus 4 ~~~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~ 69 (260)
T PRK07511 4 ELLSRR-EGSTLVLTLSNPGARNALH-------------PDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRL 69 (260)
T ss_pred eeEEEe-ECCEEEEEECCcccccCCC-------------HHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHH
Confidence 366776 7899999999999999999 99999999999999999999999999999999999999854
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
.... . .. . .....+...+++++.+
T Consensus 70 ~~~~-----------------------------~-----~~----------~------------~~~~~~~~~~~~~~~~ 93 (260)
T PRK07511 70 LENR-----------------------------A-----KP----------P------------SVQAASIDGLHDWIRA 93 (260)
T ss_pred hhcc-----------------------------c-----cc----------c------------hhHHHHHHHHHHHHHH
Confidence 3100 0 00 0 0011233445667888
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 94 l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~ 143 (260)
T PRK07511 94 IRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPD 143 (260)
T ss_pred HHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCC
Confidence 99999999999999999999999999999999999999999999999983
No 33
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=3.3e-32 Score=233.59 Aligned_cols=136 Identities=23% Similarity=0.400 Sum_probs=114.4
Q ss_pred eEEEEeecC---cEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 11 TLVVHVPKQ---FVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 11 ~~~~~~~~~---~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.+.++. ++ +|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.|++||+|.|+
T Consensus 4 ~i~~~~-~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl 69 (251)
T PRK06023 4 HILVER-PGAHPGVQVIRFNRPEKKNAIT-------------RAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDM 69 (251)
T ss_pred eEEEEe-ecCcCcEEEEEecCcccccCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCH
Confidence 477776 44 59999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++.... .+ +.. +...++++
T Consensus 70 ~~~~~~~-----------------------------~~-----~~~--------------------------~~~~~~~~ 89 (251)
T PRK06023 70 QDFLAAA-----------------------------MG-----GTS--------------------------FGSEILDF 89 (251)
T ss_pred HHHhhcc-----------------------------cc-----chh--------------------------hHHHHHHH
Confidence 8543100 00 000 00123345
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
+.+|.++||||||+|||+|+|||++++++|||||++++++|++||+++|++|.
T Consensus 90 ~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~ 142 (251)
T PRK06023 90 LIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPE 142 (251)
T ss_pred HHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCC
Confidence 67788999999999999999999999999999999999999999999999883
No 34
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=7.1e-32 Score=234.69 Aligned_cols=140 Identities=24% Similarity=0.440 Sum_probs=117.8
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
.+.++. +++|++|+||||+++|+++ .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++
T Consensus 18 ~~~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~ 83 (277)
T PRK08258 18 HFLWEV-DDGVATITLNRPERKNPLT-------------FESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEI 83 (277)
T ss_pred ceEEEE-ECCEEEEEeCCcccccCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHH
Confidence 677777 7899999999999999999 99999999999999999999999999999999999999854
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
.... . +... .....+...+++++.+
T Consensus 84 ~~~~-----------------------------~--------------~~~~------------~~~~~~~~~~~~~~~~ 108 (277)
T PRK08258 84 IGPL-----------------------------T--------------KMDM------------PELLAFTRMTGDLVKA 108 (277)
T ss_pred hccc-----------------------------c--------------ccCh------------hHHHHHHHHHHHHHHH
Confidence 2100 0 0000 0011223334567888
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 109 l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p 157 (277)
T PRK08258 109 MRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAG 157 (277)
T ss_pred HHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCC
Confidence 9999999999999999999999999999999999999999999999985
No 35
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=5.8e-32 Score=233.48 Aligned_cols=140 Identities=28% Similarity=0.523 Sum_probs=117.7
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCC
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLD 86 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~D 86 (220)
..+.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|+| ++||+|.|
T Consensus 6 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~D 71 (262)
T PRK06144 6 STDELLLEV-RGGIARITFNRPAARNAMT-------------WAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTD 71 (262)
T ss_pred CCCceEEEe-eCCEEEEEecCCcccCCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcC
Confidence 356677887 7899999999999999999 99999999999999999999999999998 79999999
Q ss_pred cccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q psy8151 87 LSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 166 (220)
Q Consensus 87 l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (220)
++++... ... . + ...+...+++
T Consensus 72 l~~~~~~-----------------------------------~~~----------~------~-------~~~~~~~~~~ 93 (262)
T PRK06144 72 IAQFRAF-----------------------------------STA----------E------D-------AVAYERRIDR 93 (262)
T ss_pred HHHHhhc-----------------------------------cch----------h------H-------HHHHHHHHHH
Confidence 9753210 000 0 0 0011233456
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccce-ecccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVD-IGKWK 219 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~-~Gl~p 219 (220)
++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||++ +|++|
T Consensus 94 ~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p 147 (262)
T PRK06144 94 VLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCL 147 (262)
T ss_pred HHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCC
Confidence 677888999999999999999999999999999999999999999997 99987
No 36
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=3.7e-32 Score=239.14 Aligned_cols=166 Identities=26% Similarity=0.306 Sum_probs=122.2
Q ss_pred CCCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCC
Q psy8151 6 PDTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGL 85 (220)
Q Consensus 6 ~~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~ 85 (220)
-++|+++.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.
T Consensus 6 ~~~~~~v~~e~-~~~V~~Itlnrp~~~Nal~-------------~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~ 71 (302)
T PRK08272 6 LDNLKTMTYEV-TGRIARITLNRPEKGNAIT-------------ADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGY 71 (302)
T ss_pred cCCCCeEEEEe-ECCEEEEEecCccccCCCC-------------HHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCc
Confidence 34578888887 7899999999999999999 999999999999999999999999999999999999
Q ss_pred CcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q psy8151 86 DLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 165 (220)
Q Consensus 86 Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (220)
|++++......... ....+ ......... ... ..+ ......++..++
T Consensus 72 Dl~~~~~~~~~~~~---------------~~~~~------~~~~~~~~~------~~~---~~~----~~~~~~~~~~~~ 117 (302)
T PRK08272 72 DLSAYAEGSSSGGG---------------GGAYP------GKRQAVNHL------PDD---PWD----PMIDYQMMSRFV 117 (302)
T ss_pred CHHHHhhccccccc---------------ccccc------ccccccccc------ccc---ccc----chhhHHHHHHHH
Confidence 99876421100000 00000 000000000 000 000 000112234456
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|.+|
T Consensus 118 ~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~ 171 (302)
T PRK08272 118 RGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVP 171 (302)
T ss_pred HHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcccCC
Confidence 677888999999999999999999999999999999999999999999975444
No 37
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=4.8e-32 Score=234.29 Aligned_cols=144 Identities=26% Similarity=0.372 Sum_probs=116.8
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchH-HHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNH-TMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG 89 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~ 89 (220)
.+.++. +++|++|+||||+++|++| . +|+.+|.+++++++.|+++|+|||+|.|++||+|.|+++
T Consensus 4 ~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~ 69 (266)
T PRK09245 4 FLLVER-DGHIVTLTMNRPETRNALS-------------DNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKD 69 (266)
T ss_pred ceEEEE-ECCEEEEEECCcccccCCC-------------hHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHH
Confidence 367776 6899999999999999999 8 899999999999999999999999999999999999986
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+.+... + +... ... ....+...++.++.
T Consensus 70 ~~~~~~-----------------------------~--~~~~--~~~-------------------~~~~~~~~~~~~~~ 97 (266)
T PRK09245 70 MRARVG-----------------------------A--FGGS--PAD-------------------IRQGYRHGIQRIPL 97 (266)
T ss_pred Hhhccc-----------------------------c--cccc--chh-------------------HHHHHHHHHHHHHH
Confidence 531000 0 0000 000 00011223455677
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 98 ~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~ 148 (266)
T PRK09245 98 ALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPG 148 (266)
T ss_pred HHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCC
Confidence 888999999999999999999999999999999999999999999999883
No 38
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=6.6e-32 Score=232.62 Aligned_cols=135 Identities=24% Similarity=0.387 Sum_probs=114.5
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSG 89 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~~ 89 (220)
.+.++. +++|++||||||++ |++| .+|+.+|.+++++++.|+++|+|||+|.| +.||+|.|+++
T Consensus 4 ~v~~~~-~~~v~~itlnrp~~-Nal~-------------~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~ 68 (258)
T PRK09076 4 ELDLEI-DGHVAILTLNNPPA-NTWT-------------ADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNL 68 (258)
T ss_pred EEEEEE-ECCEEEEEECCCCc-CCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHH
Confidence 467776 78999999999986 9999 99999999999999999999999999999 78999999975
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+... + . . . ...+...++.++.
T Consensus 69 ~~~~---------------------------------------~------~-~------~-------~~~~~~~~~~~~~ 89 (258)
T PRK09076 69 FADG---------------------------------------D------K-A------V-------AREMARRFGEAFE 89 (258)
T ss_pred Hhhc---------------------------------------C------h-h------h-------HHHHHHHHHHHHH
Confidence 3200 0 0 0 0 0011233456678
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 90 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p 139 (258)
T PRK09076 90 ALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLP 139 (258)
T ss_pred HHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCC
Confidence 88999999999999999999999999999999999999999999999988
No 39
>KOG1681|consensus
Probab=99.98 E-value=1.2e-32 Score=228.29 Aligned_cols=154 Identities=55% Similarity=0.953 Sum_probs=134.1
Q ss_pred CCCcceEEEE--eecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceec
Q psy8151 6 PDTYKTLVVH--VPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTA 83 (220)
Q Consensus 6 ~~~~~~~~~~--~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~Fsa 83 (220)
...|+++.+. ..++.|.++.||||.|+|+++ ..||.|+.++++.+++||++|+|||.|+|++||+
T Consensus 15 ~~s~ksl~v~vk~~~~~V~hv~lnRPsk~Nal~-------------~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFca 81 (292)
T KOG1681|consen 15 DHSYKSLEVSVKSAQPFVYHVQLNRPSKLNALN-------------KVFWREFKECFDSLDRDPDCRAIILSGAGKHFCA 81 (292)
T ss_pred ccccceeeeeecCCCCeEEEEEecCcchhhhhh-------------HHHHHHHHHHHHhhccCCCceEEEEecCCcceec
Confidence 3458877766 557799999999999999999 9999999999999999999999999999999999
Q ss_pred CCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHH
Q psy8151 84 GLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITT 163 (220)
Q Consensus 84 G~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 163 (220)
|.|++.+..... .. .+..|..|.+..+++++..
T Consensus 82 GIDl~~~~~~~~--------------------------~~---------------------~~~dd~aR~g~~lrr~Ik~ 114 (292)
T KOG1681|consen 82 GIDLNDMASDRI--------------------------LQ---------------------PEGDDVARKGRSLRRIIKR 114 (292)
T ss_pred ccCcchhhhhhc--------------------------cc---------------------cccchHhhhhHHHHHHHHH
Confidence 999875441100 00 1123456777889999999
Q ss_pred HHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 164 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 164 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+|+.+..|++||||+|++|||+|+|+|+.|..+||+||+++||.|+..|+.+|+..
T Consensus 115 ~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaA 170 (292)
T KOG1681|consen 115 YQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAA 170 (292)
T ss_pred HHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhh
Confidence 99999999999999999999999999999999999999999999999999999864
No 40
>PLN02888 enoyl-CoA hydratase
Probab=99.98 E-value=5.3e-32 Score=234.17 Aligned_cols=139 Identities=29% Similarity=0.575 Sum_probs=116.4
Q ss_pred CCCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCC
Q psy8151 6 PDTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGL 85 (220)
Q Consensus 6 ~~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~ 85 (220)
|...+.+.++..+++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.
T Consensus 5 ~~~~~~i~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~ 71 (265)
T PLN02888 5 TVSENLILVPKSRNGIATITINRPKALNALT-------------RPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGV 71 (265)
T ss_pred cCCCCeEEEEeccCCEEEEEEcCCCcccCCC-------------HHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCC
Confidence 4445667777657899999999999999999 999999999999999999999999999999999999
Q ss_pred CcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q psy8151 86 DLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 165 (220)
Q Consensus 86 Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (220)
|++++.+. . .+ +.. . ..+
T Consensus 72 Dl~~~~~~----------------------------------~-~~-~~~------~--------------------~~~ 89 (265)
T PLN02888 72 DLTAAEEV----------------------------------F-KG-DVK------D--------------------VET 89 (265)
T ss_pred CHHHHHhh----------------------------------c-cc-hhh------H--------------------HHH
Confidence 99853210 0 00 000 0 012
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 90 ~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p 143 (265)
T PLN02888 90 DPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFP 143 (265)
T ss_pred HHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCC
Confidence 334567889999999999999999999999999999999999999999999988
No 41
>PLN02600 enoyl-CoA hydratase
Probab=99.98 E-value=5.6e-32 Score=232.26 Aligned_cols=131 Identities=28% Similarity=0.538 Sum_probs=112.2
Q ss_pred ecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecC-CCceecCCCcccccccch
Q psy8151 17 PKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAA-GKIFTAGLDLSGMLSLGQ 95 (220)
Q Consensus 17 ~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~-G~~FsaG~Dl~~~~~~~~ 95 (220)
++++|++||||||+++|++| .+|+.+|.+++++++.|+++|+|||+|. |++||+|.|++++...
T Consensus 1 ~~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~-- 65 (251)
T PLN02600 1 PDSGIVELRLDRPEAKNAIG-------------KEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM-- 65 (251)
T ss_pred CCCcEEEEEEcCCcccCCCC-------------HHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc--
Confidence 36789999999999999999 9999999999999999999999999998 4899999999753200
Q ss_pred hhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy8151 96 EIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCP 175 (220)
Q Consensus 96 ~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 175 (220)
.. .+ ...+...++.++.++.++|
T Consensus 66 ---------------------------------------------~~-----~~-------~~~~~~~~~~~~~~l~~~~ 88 (251)
T PLN02600 66 ---------------------------------------------SP-----SE-------VQKFVNSLRSTFSSLEALS 88 (251)
T ss_pred ---------------------------------------------Ch-----HH-------HHHHHHHHHHHHHHHHhCC
Confidence 00 00 1122334556777889999
Q ss_pred CcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 176 KPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 176 kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
|||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 89 kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p 132 (251)
T PLN02600 89 IPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIP 132 (251)
T ss_pred CCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCC
Confidence 99999999999999999999999999999999999999999987
No 42
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=9.9e-32 Score=232.86 Aligned_cols=141 Identities=26% Similarity=0.480 Sum_probs=117.4
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDL 87 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl 87 (220)
-+.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.| ++||+|.|+
T Consensus 10 ~~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl 75 (269)
T PRK06127 10 TGKLLAEK-TGGLGRITFNNPARHNAMS-------------LDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADI 75 (269)
T ss_pred CCceEEEE-ECCEEEEEecCCCccCCCC-------------HHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCH
Confidence 34477777 7899999999999999999 99999999999999999999999999998 799999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++.... . . . + ....+....+.+
T Consensus 76 ~~~~~~~-----------------------------~------~----------~------~------~~~~~~~~~~~~ 98 (269)
T PRK06127 76 SQFEESR-----------------------------S------D----------A------E------AVAAYEQAVEAA 98 (269)
T ss_pred HHHhhcc-----------------------------c------c----------h------H------HHHHHHHHHHHH
Confidence 7532100 0 0 0 0 001122234456
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
+.+|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 99 ~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~ 151 (269)
T PRK06127 99 QAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYG 151 (269)
T ss_pred HHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCC
Confidence 77889999999999999999999999999999999999999999999999873
No 43
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=99.98 E-value=8.3e-32 Score=231.29 Aligned_cols=131 Identities=22% Similarity=0.461 Sum_probs=112.7
Q ss_pred EEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccccc
Q psy8151 12 LVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGML 91 (220)
Q Consensus 12 ~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~ 91 (220)
+.++. +++|++|+||||+ .|++| .+|+.+|.++++.++.|+++|+|||+|+|++||+|.|++++.
T Consensus 3 v~~~~-~~~v~~itlnrp~-~Nal~-------------~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~ 67 (251)
T TIGR03189 3 VWLER-DGKLLRLRLARPK-ANIVD-------------AAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHM 67 (251)
T ss_pred EEEEe-eCCEEEEEeCCCC-cCCCC-------------HHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhC
Confidence 56666 6889999999997 59999 999999999999999999999999999999999999997421
Q ss_pred ccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8151 92 SLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL 171 (220)
Q Consensus 92 ~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (220)
. . . . ..+...+++++.++
T Consensus 68 ~-------------------------------------------~-----~------~--------~~~~~~~~~~~~~l 85 (251)
T TIGR03189 68 P-------------------------------------------D-----Q------C--------AAMLASLHKLVIAM 85 (251)
T ss_pred c-------------------------------------------h-----h------H--------HHHHHHHHHHHHHH
Confidence 0 0 0 0 00112345567788
Q ss_pred hcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 172 ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 172 ~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 86 ~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p 133 (251)
T TIGR03189 86 LDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFA 133 (251)
T ss_pred HhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCC
Confidence 999999999999999999999999999999999999999999999987
No 44
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=99.98 E-value=7e-32 Score=232.63 Aligned_cols=140 Identities=26% Similarity=0.425 Sum_probs=115.2
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDL 87 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl 87 (220)
|+.+.++..+++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.| ++||+|.|+
T Consensus 1 ~~~i~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl 67 (259)
T TIGR01929 1 FTDIRYEKSTDGIAKITINRPQVRNAFR-------------PLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQ 67 (259)
T ss_pred CceEEEEEcCCCEEEEEecCCccccCCC-------------HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcCh
Confidence 4567776536899999999999999999 99999999999999999999999999999 799999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++... +. . .. . .. . . ..+.++
T Consensus 68 ~~~~~~-------------------------------------~~--~-----~~------~-~~--~---~--~~~~~~ 89 (259)
T TIGR01929 68 KVRGDY-------------------------------------GY--I-----DD------S-GV--H---R--LNVLDV 89 (259)
T ss_pred HhHhhc-------------------------------------cc--c-----ch------h-hH--H---H--HHHHHH
Confidence 753200 00 0 00 0 00 0 0 012345
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 90 ~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p 141 (259)
T TIGR01929 90 QRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFD 141 (259)
T ss_pred HHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCC
Confidence 6678899999999999999999999999999999999999999999999987
No 45
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=8.5e-32 Score=231.80 Aligned_cols=140 Identities=34% Similarity=0.583 Sum_probs=116.7
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
-|+++.++. +++|++|+||||+ .|++| .+|+.+|.++++.++.|+++|+|||+|.|++||+|.|+
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~-~Nal~-------------~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl 66 (257)
T PRK06495 2 MMSQLKLEV-SDHVAVVTLDNPP-VNALS-------------RELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADL 66 (257)
T ss_pred CcceEEEEe-eCCEEEEEECCCc-cccCC-------------HHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCH
Confidence 366788887 7899999999997 59999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++... . ... . + ...+...++++
T Consensus 67 ~~~~~~-----------------------~-----------~~~----------~------~-------~~~~~~~~~~~ 89 (257)
T PRK06495 67 KGRPDV-----------------------I-----------KGP----------G------D-------LRAHNRRTREC 89 (257)
T ss_pred HhHhhc-----------------------c-----------CCc----------h------h-------HHHHHHHHHHH
Confidence 853210 0 000 0 0 01112334556
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+.+
T Consensus 90 ~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~ 141 (257)
T PRK06495 90 FHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLAG 141 (257)
T ss_pred HHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCccc
Confidence 7788899999999999999999999999999999999999999999999864
No 46
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=99.98 E-value=5.2e-32 Score=232.95 Aligned_cols=136 Identities=35% Similarity=0.515 Sum_probs=112.6
Q ss_pred EEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccc
Q psy8151 13 VVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS 92 (220)
Q Consensus 13 ~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~ 92 (220)
.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+ +|+|||+|.|++||+|.|++++..
T Consensus 2 ~~e~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~ 66 (256)
T TIGR02280 2 LSAL-EAGVARLTLNRPDKLNSFT-------------AEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNP 66 (256)
T ss_pred eEEE-ECCEEEEEecCcccccCCC-------------HHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhh
Confidence 4555 7899999999999999999 999999999999999999 999999999999999999985431
Q ss_pred cchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8151 93 LGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLE 172 (220)
Q Consensus 93 ~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (220)
. .. ...+. ...+...++.++.++.
T Consensus 67 ~------------------------------~~----~~~~~----------------------~~~~~~~~~~~~~~l~ 90 (256)
T TIGR02280 67 T------------------------------PG----GAPDL----------------------GRTIETFYNPLVRRLR 90 (256)
T ss_pred c------------------------------cc----cchhH----------------------HHHHHHHHHHHHHHHH
Confidence 0 00 00000 0001112345667788
Q ss_pred cCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 173 RCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 173 ~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 91 ~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p 137 (256)
T TIGR02280 91 ALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIP 137 (256)
T ss_pred hCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCC
Confidence 99999999999999999999999999999999999999999999987
No 47
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=8e-32 Score=231.70 Aligned_cols=136 Identities=32% Similarity=0.587 Sum_probs=115.5
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
.+.++. +++|++|+||||++ |++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++
T Consensus 3 ~i~~~~-~~~v~~itl~rp~~-Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~ 67 (257)
T PRK07658 3 FLSVRV-EDHVAVITLNHPPA-NALS-------------SQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEF 67 (257)
T ss_pred eEEEEe-eCCEEEEEECCCCC-CCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHH
Confidence 567776 78999999999986 9999 99999999999999999999999999999999999999853
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
... ... . + ...+....+.++.+
T Consensus 68 ~~~-----------------------------------~~~----------~------~-------~~~~~~~~~~~~~~ 89 (257)
T PRK07658 68 TSV-----------------------------------TEA----------E------Q-------ATELAQLGQVTFER 89 (257)
T ss_pred hcc-----------------------------------Cch----------h------h-------HHHHHHHHHHHHHH
Confidence 210 000 0 0 01122334566788
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 90 l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 138 (257)
T PRK07658 90 VEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIP 138 (257)
T ss_pred HHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCC
Confidence 8999999999999999999999999999999999999999999999998
No 48
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=99.98 E-value=6.5e-32 Score=237.27 Aligned_cols=154 Identities=29% Similarity=0.448 Sum_probs=115.5
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.|+++.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|+|++||+|.|+
T Consensus 3 ~~~~v~~~~-~~~Va~ItLnrP~~~NAl~-------------~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl 68 (298)
T PRK12478 3 DFQTLLYTT-AGPVATITLNRPEQLNTIV-------------PPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDF 68 (298)
T ss_pred CceEEEEec-cCCEEEEEecCCcccCCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCc
Confidence 466788886 7899999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
++....... .. ...+. .....++.. ........+..
T Consensus 69 ~~~~~~~~~------------------~~-----~~~~~-~~~~~~~~~--------------------~~~~~~~~~~~ 104 (298)
T PRK12478 69 GGGFQHWGE------------------AM-----MTDGR-WDPGKDFAM--------------------VTARETGPTQK 104 (298)
T ss_pred cccccccch------------------hc-----ccccc-cCchhhhhh--------------------hhhhhcchHHH
Confidence 752100000 00 00000 000000000 00000011233
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEeccccee-cccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI-GKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~-Gl~p 219 (220)
+.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++ |+++
T Consensus 105 ~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~ 157 (298)
T PRK12478 105 FMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL 157 (298)
T ss_pred HHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc
Confidence 556788999999999999999999999999999999999999999997 8864
No 49
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=1.3e-31 Score=234.30 Aligned_cols=161 Identities=30% Similarity=0.408 Sum_probs=121.5
Q ss_pred CCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCC
Q psy8151 7 DTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLD 86 (220)
Q Consensus 7 ~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~D 86 (220)
++|+.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|
T Consensus 1 ~~~~~v~~~~-~~~Va~ItlnrP~~~Nal~-------------~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~D 66 (288)
T PRK08290 1 MEYEYVRYEV-AGRIARITLNRPEARNAQN-------------RQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHD 66 (288)
T ss_pred CCCceEEEEe-eCCEEEEEecCccccCCCC-------------HHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCC
Confidence 4577888887 7899999999999999999 9999999999999999999999999999999999999
Q ss_pred cccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q psy8151 87 LSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 166 (220)
Q Consensus 87 l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (220)
++++......... .-+.|.+.-.+ .+ +... . .........+.+
T Consensus 67 l~~~~~~~~~~~~---------------~~~~~~~~~~~----~~-------~~~~------~-----~~~~~~~~~~~~ 109 (288)
T PRK08290 67 LGSGTPGRDRDPG---------------PDQHPTLWWDG----AT-------KPGV------E-----QRYAREWEVYLG 109 (288)
T ss_pred ccccccccccccc---------------ccccccccccc----cc-------ccch------h-----hHHHHHHHHHHH
Confidence 9975321000000 00011110000 00 0000 0 001112233456
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKW 218 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~ 218 (220)
++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+.
T Consensus 110 ~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl~ 161 (288)
T PRK08290 110 MCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGIP 161 (288)
T ss_pred HHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCcC
Confidence 6778899999999999999999999999999999999999999999999985
No 50
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=5.4e-32 Score=232.69 Aligned_cols=135 Identities=31% Similarity=0.419 Sum_probs=110.2
Q ss_pred EEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccc
Q psy8151 13 VVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS 92 (220)
Q Consensus 13 ~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~ 92 (220)
.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|+|++||+|.|++++..
T Consensus 2 ~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~ 67 (255)
T PRK06563 2 SRER-RGHVLLIGLDRPAKRNAFD-------------SAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAP 67 (255)
T ss_pred eEEE-ECCEEEEEECCcccccCCC-------------HHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhh
Confidence 3555 6899999999999999999 9999999999999999999999999999999999999986431
Q ss_pred cchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8151 93 LGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLE 172 (220)
Q Consensus 93 ~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (220)
... . ....+ ..... +.+...+.
T Consensus 68 ~~~----------------------------~-----~~~~~----------------------~~~~~---~~~~~~l~ 89 (255)
T PRK06563 68 KLA----------------------------A-----GGFPF----------------------PEGGI---DPWGTVGR 89 (255)
T ss_pred ccc----------------------------c-----chhhh----------------------hhhhh---HHHHHHHh
Confidence 000 0 00000 00000 11122467
Q ss_pred cCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 173 RCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 173 ~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 90 ~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p 136 (255)
T PRK06563 90 RLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILP 136 (255)
T ss_pred cCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCC
Confidence 89999999999999999999999999999999999999999999988
No 51
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=99.97 E-value=1.2e-31 Score=231.50 Aligned_cols=139 Identities=26% Similarity=0.426 Sum_probs=116.8
Q ss_pred CCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecC-C-CceecC
Q psy8151 7 DTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAA-G-KIFTAG 84 (220)
Q Consensus 7 ~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~-G-~~FsaG 84 (220)
+.|+.+.++. +++|++||||||+++|++| .+|+.+|.+++++++.|+ +|+|||+|. + ++||+|
T Consensus 1 ~~~~~~~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG 65 (261)
T PRK11423 1 MSMQYVNVVT-INKIATITFNNPAKRNALS-------------KVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAG 65 (261)
T ss_pred CCccceEEEe-ECCEEEEEEcCccccCCCC-------------HHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECC
Confidence 3567788887 7899999999999999999 999999999999999998 999999996 3 899999
Q ss_pred CCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHH
Q psy8151 85 LDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 164 (220)
Q Consensus 85 ~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (220)
.|++++... +.+. . .+...+
T Consensus 66 ~Dl~~~~~~-------------------------------------~~~~-------~----------------~~~~~~ 85 (261)
T PRK11423 66 HDIHELPSG-------------------------------------GRDP-------L----------------SYDDPL 85 (261)
T ss_pred cCHHHHhhc-------------------------------------cccH-------H----------------HHHHHH
Confidence 999853210 0000 0 011224
Q ss_pred HHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 165 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 165 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
++++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 86 ~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~ 141 (261)
T PRK11423 86 RQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYN 141 (261)
T ss_pred HHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCC
Confidence 55677888999999999999999999999999999999999999999999999873
No 52
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=1e-31 Score=231.97 Aligned_cols=142 Identities=27% Similarity=0.412 Sum_probs=115.5
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
.++.+.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|+
T Consensus 3 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl 68 (263)
T PRK07799 3 GGPHALVEQ-RGHTLIVTMNRPEARNALS-------------TEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDL 68 (263)
T ss_pred CCceEEEEE-ECCEEEEEECCCcccCCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCH
Confidence 467788887 7899999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++.... .+..+ .. . ... ...+..
T Consensus 69 ~~~~~~~-----------------------------~~~~~------~~-----~------------~~~---~~~~~~- 92 (263)
T PRK07799 69 KAATKKP-----------------------------PGDSF------KD-----G------------SYD---PSRIDA- 92 (263)
T ss_pred HHHhhcc-----------------------------ccchh------hh-----h------------hhh---hhHHHH-
Confidence 8643100 00000 00 0 000 011122
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 93 ~~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 144 (263)
T PRK07799 93 LLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFP 144 (263)
T ss_pred HHHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCC
Confidence 2346789999999999999999999999999999999999999999999988
No 53
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=1.3e-31 Score=230.92 Aligned_cols=136 Identities=34% Similarity=0.484 Sum_probs=113.0
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCC
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLD 86 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~D 86 (220)
+|+.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.| ++||+|.|
T Consensus 2 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~D 67 (259)
T PRK06494 2 ALPFSTVER-KGHVTIVTLNRPEVMNALH-------------LDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGND 67 (259)
T ss_pred CCceeEEEe-ECCEEEEEEcCccccCCCC-------------HHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceecccc
Confidence 567788887 7899999999999999999 99999999999999999999999999998 79999999
Q ss_pred cccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q psy8151 87 LSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 166 (220)
Q Consensus 87 l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (220)
++++.... . .+ . . .. .+..
T Consensus 68 l~~~~~~~-----------------------------~-----~~----~-----~-----------~~-------~~~~ 86 (259)
T PRK06494 68 LKEQAAGG-----------------------------K-----RG----W-----P-----------ES-------GFGG 86 (259)
T ss_pred HHhHhhcC-----------------------------c-----ch----h-----h-----------hH-------HHHH
Confidence 98532100 0 00 0 0 00 0011
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 87 -~~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 138 (259)
T PRK06494 87 -LTSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAA 138 (259)
T ss_pred -HHHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCC
Confidence 1223478999999999999999999999999999999999999999999988
No 54
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=1.2e-31 Score=230.66 Aligned_cols=137 Identities=28% Similarity=0.525 Sum_probs=117.6
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG 89 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~ 89 (220)
+.+.++. +++|++|+||||++.|++| .+++.+|.+++++++.|+++|+|||+|.|++||+|.|+++
T Consensus 5 ~~i~~~~-~~~v~~i~lnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~ 70 (259)
T PRK06688 5 TDLLVEL-EDGVLTITINRPDKKNALT-------------AAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKD 70 (259)
T ss_pred CceEEEE-ECCEEEEEecCcccccCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHH
Confidence 4577777 6899999999999999999 9999999999999999999999999999999999999985
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+.... .. . ..+...+++++.
T Consensus 71 ~~~~~-----------------------------~~-----~--------------------------~~~~~~~~~~~~ 90 (259)
T PRK06688 71 FPKAP-----------------------------PK-----P--------------------------PDELAPVNRFLR 90 (259)
T ss_pred HhccC-----------------------------cc-----h--------------------------HHHHHHHHHHHH
Confidence 43100 00 0 011233456677
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|.
T Consensus 91 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~ 141 (259)
T PRK06688 91 AIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPD 141 (259)
T ss_pred HHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCC
Confidence 889999999999999999999999999999999999999999999999983
No 55
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=1.5e-31 Score=229.47 Aligned_cols=136 Identities=30% Similarity=0.547 Sum_probs=113.0
Q ss_pred EEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccccc
Q psy8151 12 LVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGML 91 (220)
Q Consensus 12 ~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~ 91 (220)
++++..+++|++|+||||++ |+++ .+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++.
T Consensus 3 ~~~~~~~~~v~~itlnrp~~-Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~ 68 (249)
T PRK07938 3 ITSTTPEPGIAEVTVDYPPV-NALP-------------SAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQ 68 (249)
T ss_pred eeecccCCCEEEEEECCCCc-ccCC-------------HHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHh
Confidence 44555578999999999975 9999 999999999999999999999999999999999999997532
Q ss_pred ccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8151 92 SLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL 171 (220)
Q Consensus 92 ~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (220)
.. .+ . . ........+++++.+|
T Consensus 69 ~~------------------------------------~~----~-----~-------------~~~~~~~~~~~~~~~i 90 (249)
T PRK07938 69 AT------------------------------------PG----F-----T-------------ALIDANRGCFAAFRAV 90 (249)
T ss_pred hc------------------------------------cc----h-----h-------------HHHHHHHHHHHHHHHH
Confidence 10 00 0 0 0001112344567788
Q ss_pred hcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 172 ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 172 ~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+++
T Consensus 91 ~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~g 138 (249)
T PRK07938 91 YECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGALG 138 (249)
T ss_pred HhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCch
Confidence 899999999999999999999999999999999999999999999864
No 56
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=1.7e-31 Score=228.36 Aligned_cols=129 Identities=29% Similarity=0.519 Sum_probs=111.4
Q ss_pred EEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccccc
Q psy8151 12 LVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGML 91 (220)
Q Consensus 12 ~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~ 91 (220)
+.++. +++|++||||||+++|++| .+|+.+|.+++++++.+ ++|+|||+|.|++||+|.|+++..
T Consensus 2 ~~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~ 66 (243)
T PRK07854 2 IGVTR-DGQVLTIELQRPERRNALN-------------AELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDV 66 (243)
T ss_pred ceEEE-eCCEEEEEeCCCccccCCC-------------HHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccch
Confidence 45666 6899999999999999999 99999999999999865 899999999999999999996200
Q ss_pred ccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8151 92 SLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL 171 (220)
Q Consensus 92 ~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (220)
. . ..+...+++++.+|
T Consensus 67 --------------------------------------------~-----~---------------~~~~~~~~~~~~~l 82 (243)
T PRK07854 67 --------------------------------------------Y-----A---------------DDFPDALIEMLHAI 82 (243)
T ss_pred --------------------------------------------h-----H---------------HHHHHHHHHHHHHH
Confidence 0 0 00112344567778
Q ss_pred hcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 172 ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 172 ~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 83 ~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p 130 (243)
T PRK07854 83 DAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIAL 130 (243)
T ss_pred HhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCC
Confidence 899999999999999999999999999999999999999999999988
No 57
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=99.97 E-value=2.1e-31 Score=229.23 Aligned_cols=139 Identities=24% Similarity=0.357 Sum_probs=115.4
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCc
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl 87 (220)
+|+++.++. +++|++|+||||+++|++| .+|+.+|.+++++++ +++|+||++|.|++||+|.|+
T Consensus 2 ~~~~i~~~~-~~~i~~itlnrp~~~Nal~-------------~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl 65 (255)
T PRK07112 2 DYQTIRVRQ-QGDVCFLQLHRPEAQNTIN-------------DRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADF 65 (255)
T ss_pred CCceEEEEe-eCCEEEEEEcCCCccCCCC-------------HHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCH
Confidence 477888887 7899999999999999999 999999999999998 369999999999999999999
Q ss_pred ccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q psy8151 88 SGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 167 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
+++.+... . + . . . ......++++
T Consensus 66 ~~~~~~~~----------------------------~------~----~-----~-----------~---~~~~~~~~~~ 88 (255)
T PRK07112 66 SAIAEKPD----------------------------A------G----R-----A-----------D---LIDAEPLYDL 88 (255)
T ss_pred HHHhhccc----------------------------c------c----h-----h-----------h---hhhHHHHHHH
Confidence 85431000 0 0 0 0 0 0001223456
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 89 ~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p 140 (255)
T PRK07112 89 WHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIP 140 (255)
T ss_pred HHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCc
Confidence 7788899999999999999999999999999999999999999999999987
No 58
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=99.97 E-value=2.1e-31 Score=241.89 Aligned_cols=141 Identities=23% Similarity=0.375 Sum_probs=116.6
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG 89 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~ 89 (220)
..+.++. +++|++||||||+++|++| .+|+.+|.++++.++.|+++|+|||+|+|++||+|+|+++
T Consensus 37 ~~V~~e~-~g~v~~ItLNRP~~lNALs-------------~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~ 102 (401)
T PLN02157 37 YQVLVEG-SGCSRTAILNRPPALNALT-------------THMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVS 102 (401)
T ss_pred CceEEEE-ECCEEEEEECCCCccCCCC-------------HHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHH
Confidence 3466666 7899999999999999999 9999999999999999999999999999999999999986
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+.... ..+ . . . ....++.....++.
T Consensus 103 l~~~~----------------------------~~~-----~--~-~-------------------~~~~~~~~~~~l~~ 127 (401)
T PLN02157 103 LYHLR----------------------------KRG-----S--P-D-------------------AIREFFSSLYSFIY 127 (401)
T ss_pred HHhhc----------------------------ccc-----c--h-H-------------------HHHHHHHHHHHHHH
Confidence 43100 000 0 0 0 01122223334567
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 128 ~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~P 177 (401)
T PLN02157 128 LLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHP 177 (401)
T ss_pred HHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCC
Confidence 78899999999999999999999999999999999999999999999998
No 59
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=99.97 E-value=2.3e-31 Score=231.09 Aligned_cols=140 Identities=28% Similarity=0.448 Sum_probs=116.4
Q ss_pred CcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCC
Q psy8151 8 TYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLD 86 (220)
Q Consensus 8 ~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~D 86 (220)
+|+++.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.| +.||+|.|
T Consensus 11 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~D 76 (273)
T PRK07396 11 EYEDILYKS-ADGIAKITINRPEVRNAFR-------------PKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGD 76 (273)
T ss_pred CCcceEEEe-cCCEEEEEEcCCcccCCCC-------------HHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcC
Confidence 567888887 7899999999999999999 99999999999999999999999999999 69999999
Q ss_pred cccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q psy8151 87 LSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 166 (220)
Q Consensus 87 l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (220)
++++... + . ...+ . ...+ ...+
T Consensus 77 l~~~~~~-------------------------------~--~-~~~~--------~--------------~~~~--~~~~ 98 (273)
T PRK07396 77 QKVRGYG-------------------------------G--Y-VDDD--------G--------------VPRL--NVLD 98 (273)
T ss_pred hhhhhcc-------------------------------c--c-cchh--------h--------------hhhh--HHHH
Confidence 9853200 0 0 0000 0 0000 1223
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 99 ~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p 151 (273)
T PRK07396 99 LQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFD 151 (273)
T ss_pred HHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccC
Confidence 45678889999999999999999999999999999999999999999999987
No 60
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=99.97 E-value=2e-31 Score=241.08 Aligned_cols=144 Identities=22% Similarity=0.346 Sum_probs=119.3
Q ss_pred CCCCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecC
Q psy8151 5 TPDTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAG 84 (220)
Q Consensus 5 ~~~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG 84 (220)
..+.++.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|+|++||+|
T Consensus 6 ~~~~~~~v~~~~-~~~v~~ItLnrP~~~Nal~-------------~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG 71 (379)
T PLN02874 6 QNPAEEVVLGEE-KGRVRVITLNRPRQLNVIS-------------LSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAG 71 (379)
T ss_pred CCCCCCceEEEE-ECCEEEEEECCCccccCCC-------------HHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCc
Confidence 345567788886 7899999999999999999 99999999999999999999999999999999999
Q ss_pred CCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHH
Q psy8151 85 LDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 164 (220)
Q Consensus 85 ~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (220)
.|++++.... . .+ + . ...+...+
T Consensus 72 ~Dl~~~~~~~-----------------------------~-----~~-~--~--------------------~~~~~~~~ 94 (379)
T PLN02874 72 GDLKMFYDGR-----------------------------E-----SD-D--S--------------------CLEVVYRM 94 (379)
T ss_pred cCHHHHHhhc-----------------------------c-----cc-h--H--------------------HHHHHHHH
Confidence 9998532100 0 00 0 0 00111223
Q ss_pred HHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 165 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 165 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++.+|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 95 ~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p 149 (379)
T PLN02874 95 YWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHT 149 (379)
T ss_pred HHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCC
Confidence 3456678899999999999999999999999999999999999999999999998
No 61
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=99.97 E-value=3.5e-31 Score=227.10 Aligned_cols=135 Identities=26% Similarity=0.405 Sum_probs=115.6
Q ss_pred cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcc
Q psy8151 9 YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLS 88 (220)
Q Consensus 9 ~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~ 88 (220)
|+.+.++. +++|++|+||||+++|++| .+++.+|.+++++++.|+++|+|||+|.|++||+|.|++
T Consensus 4 ~~~~~~~~-~~~v~~i~ln~p~~~Nal~-------------~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~ 69 (249)
T PRK07110 4 KVVELREV-EEGIAQVTMQDRVNKNAFS-------------DELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQE 69 (249)
T ss_pred CceEEEEe-eCCEEEEEecCCCccCCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChH
Confidence 56667776 7899999999999999999 999999999999999999999999999999999999997
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++... . .+ + . .+. . ++++
T Consensus 70 ~~~~~------------------------------~-----~~-~--------~----------------~~~-~-~~~~ 87 (249)
T PRK07110 70 GLLSL------------------------------Q-----TG-K--------G----------------TFT-E-ANLY 87 (249)
T ss_pred HHhhc------------------------------c-----ch-h--------h----------------hHh-h-HHHH
Confidence 53210 0 00 0 0 000 1 3456
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 88 ~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p 138 (249)
T PRK07110 88 SLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTP 138 (249)
T ss_pred HHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCC
Confidence 778899999999999999999999999999999999999999999999987
No 62
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=4.2e-31 Score=227.10 Aligned_cols=134 Identities=30% Similarity=0.404 Sum_probs=110.9
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG 89 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~ 89 (220)
+++.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|+++
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~ 68 (254)
T PRK08252 3 DEVLVER-RGRVLIITINRPEARNAVN-------------AAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKA 68 (254)
T ss_pred ceEEEEE-ECCEEEEEECCCcccCCCC-------------HHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHH
Confidence 3577776 7899999999999999999 9999999999999999999999999999999999999985
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+... . . ... . . ..++.++
T Consensus 69 ~~~~------------------------------~------~--~~~-----~-----------~-------~~~~~~~- 86 (254)
T PRK08252 69 FARG------------------------------E------R--PSI-----P-----------G-------RGFGGLT- 86 (254)
T ss_pred Hhcc------------------------------c------c--hhh-----h-----------H-------HHHHHHH-
Confidence 4310 0 0 000 0 0 0011111
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
...+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 87 -~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~ 136 (254)
T PRK08252 87 -ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAA 136 (254)
T ss_pred -HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCC
Confidence 13689999999999999999999999999999999999999999999983
No 63
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=99.97 E-value=6.7e-31 Score=234.84 Aligned_cols=141 Identities=24% Similarity=0.420 Sum_probs=116.2
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSG 89 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~~ 89 (220)
.+.++. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.| ++||+|.|+++
T Consensus 4 ~v~~~~-~~~v~~itLnrP~~~Nal~-------------~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~ 69 (342)
T PRK05617 4 EVLAEV-EGGVGVITLNRPKALNALS-------------LEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRA 69 (342)
T ss_pred eEEEEE-ECCEEEEEECCCccccCCC-------------HHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHH
Confidence 467776 7899999999999999999 99999999999999999999999999999 99999999986
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+..... .+ ... . ...++....+++.
T Consensus 70 ~~~~~~----------------------------~~-----~~~--~--------------------~~~~~~~~~~~~~ 94 (342)
T PRK05617 70 LYEAAR----------------------------AG-----DPL--A--------------------ADRFFREEYRLNA 94 (342)
T ss_pred HHhhhc----------------------------cC-----Cch--h--------------------HHHHHHHHHHHHH
Confidence 431000 00 000 0 0011122334667
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|.
T Consensus 95 ~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~ 145 (342)
T PRK05617 95 LIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPD 145 (342)
T ss_pred HHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCC
Confidence 788999999999999999999999999999999999999999999999983
No 64
>PLN02921 naphthoate synthase
Probab=99.97 E-value=1.4e-30 Score=231.36 Aligned_cols=143 Identities=26% Similarity=0.423 Sum_probs=118.4
Q ss_pred CCCcceEEEEee-cCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-Cceec
Q psy8151 6 PDTYKTLVVHVP-KQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTA 83 (220)
Q Consensus 6 ~~~~~~~~~~~~-~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~Fsa 83 (220)
+.+|+.+.++.. +++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.| ++||+
T Consensus 61 ~~~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~-------------~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~Fca 127 (327)
T PLN02921 61 GKEFTDIIYEKAVGEGIAKITINRPERRNAFR-------------PRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCS 127 (327)
T ss_pred ccCCceEEEEEecCCCEEEEEECCCCCCCCCC-------------HHHHHHHHHHHHHHhhCCCceEEEEecCCCCceec
Confidence 346888888874 5899999999999999999 99999999999999999999999999999 89999
Q ss_pred CCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHH
Q psy8151 84 GLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITT 163 (220)
Q Consensus 84 G~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 163 (220)
|.|++++... +. .+. . . ...+ .
T Consensus 128 G~Dl~~~~~~-------------------------------~~---~~~---------~------~-------~~~~--~ 149 (327)
T PLN02921 128 GGDQAVRGKD-------------------------------GY---VGP---------D------D-------AGRL--N 149 (327)
T ss_pred CcChhhhhcc-------------------------------cc---cch---------h------H-------HHHH--H
Confidence 9999743210 00 000 0 0 0000 1
Q ss_pred HHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 164 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 164 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
..+++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 150 ~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p 205 (327)
T PLN02921 150 VLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFD 205 (327)
T ss_pred HHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCC
Confidence 22356678899999999999999999999999999999999999999999999987
No 65
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=99.97 E-value=1.4e-30 Score=226.78 Aligned_cols=148 Identities=22% Similarity=0.339 Sum_probs=119.4
Q ss_pred CCCCCCCC-cceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-
Q psy8151 1 MASFTPDT-YKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG- 78 (220)
Q Consensus 1 ~~~~~~~~-~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G- 78 (220)
||.-+|+. .+.+.++..+++|++|+||||+ .|++| .+|+.+|.+++++++.|+++|+|||+|.|
T Consensus 1 ~~~~~~~~~~~~i~~~~~~~~Va~itlnr~~-~Nal~-------------~~~~~eL~~al~~~~~d~~vr~vVltg~g~ 66 (278)
T PLN03214 1 MPAPSPPGATPGVRVDRRPGGIAVVWLAKEP-VNSMT-------------LAMWRSLDDALTALENDPTVRGVVFASGLR 66 (278)
T ss_pred CCCCCCCCCCCceEEEEcCCCEEEEEECCCC-CCCCC-------------HHHHHHHHHHHHHHHcCCCceEEEEeCCCC
Confidence 56666664 4667777645899999999985 69999 99999999999999999999999999998
Q ss_pred -CceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHH
Q psy8151 79 -KIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKIL 157 (220)
Q Consensus 79 -~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~ 157 (220)
++||+|.|++++... ... . + ..
T Consensus 67 ~~~FcaG~Dl~~~~~~-----------------------------------~~~----------~------~------~~ 89 (278)
T PLN03214 67 RDVFTAGNDIAELYAP-----------------------------------KTS----------A------A------RY 89 (278)
T ss_pred CCcccCccCHHHHhcc-----------------------------------ccc----------h------H------HH
Confidence 699999999753200 000 0 0 00
Q ss_pred HHHHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccc-c
Q psy8151 158 RKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKW-K 219 (220)
Q Consensus 158 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~-p 219 (220)
..+....+.++.+|.++||||||+|||+|+|||++++++|||||++++++|++||+++|++ |
T Consensus 90 ~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p 152 (278)
T PLN03214 90 AEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVP 152 (278)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCC
Confidence 1112223456778899999999999999999999999999999999999999999999994 6
No 66
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=99.97 E-value=9.2e-31 Score=225.84 Aligned_cols=135 Identities=30% Similarity=0.459 Sum_probs=111.4
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSG 89 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~~ 89 (220)
.+.++. +++|++|+||||+ .|++| .+|+.+|.+++++++.|+++|+|||+|.| ++||+|.|+++
T Consensus 4 ~i~~~~-~~~v~~itlnrp~-~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~ 68 (261)
T PRK03580 4 SLHTTR-NGSILEITLDRPK-ANAID-------------AKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKA 68 (261)
T ss_pred eEEEEE-ECCEEEEEECCcc-ccCCC-------------HHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHH
Confidence 367776 7899999999995 59999 99999999999999999999999999999 79999999986
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+..... . ..++ . ......+.
T Consensus 69 ~~~~~~----------------------------~------~~~~----------------------~----~~~~~~~~ 88 (261)
T PRK03580 69 AAEGEA----------------------------P------DADF----------------------G----PGGFAGLT 88 (261)
T ss_pred HhccCc----------------------------c------hhhh----------------------h----hhhhHHHH
Confidence 431000 0 0000 0 00112345
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 89 ~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~ 139 (261)
T PRK03580 89 EIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139 (261)
T ss_pred HHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCC
Confidence 677899999999999999999999999999999999999999999999883
No 67
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=99.97 E-value=7.1e-31 Score=225.82 Aligned_cols=135 Identities=30% Similarity=0.337 Sum_probs=110.2
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
++.++. +++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|+|++||+|.|++++
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~-------------~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~ 69 (254)
T PRK08259 4 SVRVER-NGPVTTVILNRPEVRNAVD-------------GPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAV 69 (254)
T ss_pred eEEEEE-ECCEEEEEecCCccccCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHH
Confidence 367776 7899999999999999999 99999999999999999999999999999999999999864
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
.+. ... +... . .... ....
T Consensus 70 ~~~------------------------------~~~------~~~~-----~-------------~~~~-------~~~~ 88 (254)
T PRK08259 70 GTG------------------------------RGN------RLHP-----S-------------GDGP-------MGPS 88 (254)
T ss_pred hcc------------------------------cch------hhhh-----h-------------hcch-------hhhH
Confidence 310 000 0000 0 0000 0011
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.
T Consensus 89 ~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~ 138 (254)
T PRK08259 89 RMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLI 138 (254)
T ss_pred HhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCC
Confidence 23689999999999999999999999999999999999999999999873
No 68
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=99.97 E-value=1.9e-30 Score=235.66 Aligned_cols=141 Identities=21% Similarity=0.356 Sum_probs=119.2
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG 89 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~ 89 (220)
+.+.++. ++++++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|+|++||+|+|+++
T Consensus 42 ~~v~~e~-~~~~~~ItLNRP~~lNALs-------------~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~ 107 (407)
T PLN02851 42 DQVLVEG-RAKSRAAILNRPSSLNALT-------------IPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVS 107 (407)
T ss_pred CCeEEEE-ECCEEEEEECCCCcCCCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHH
Confidence 4566776 7899999999999999999 9999999999999999999999999999999999999985
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+.+. .. .+ +. .....++...+++..
T Consensus 108 l~~~-----------------------------~~-----~~-~~--------------------~~~~~~f~~~~~l~~ 132 (407)
T PLN02851 108 LYHL-----------------------------IN-----EG-NV--------------------EECKLFFENLYKFVY 132 (407)
T ss_pred HHhh-----------------------------cc-----cc-ch--------------------HHHHHHHHHHHHHHH
Confidence 4310 00 00 00 011233445566777
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 133 ~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~P 182 (407)
T PLN02851 133 LQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHP 182 (407)
T ss_pred HHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCC
Confidence 88899999999999999999999999999999999999999999999988
No 69
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=99.97 E-value=2e-30 Score=234.44 Aligned_cols=140 Identities=24% Similarity=0.380 Sum_probs=114.2
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
.+.++. +++|++|+||||+++|++| .+|+.+|.++|++++.|+++|+|||+|+|++||+|+|++++
T Consensus 10 ~v~~~~-~~~i~~ItLnRP~~lNALs-------------~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l 75 (381)
T PLN02988 10 QVLVEE-KSSVRILTLNRPKQLNALS-------------FHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAV 75 (381)
T ss_pred ceEEEE-ECCEEEEEECCCCccCCCC-------------HHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHH
Confidence 466776 7899999999999999999 99999999999999999999999999999999999999854
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
... .. .+ +... ...++.....+...
T Consensus 76 ~~~-----------------------------~~-----~~-~~~~--------------------~~~~f~~~~~l~~~ 100 (381)
T PLN02988 76 VRD-----------------------------IE-----QG-NWRL--------------------GANFFSDEYMLNYV 100 (381)
T ss_pred Hhh-----------------------------hc-----cc-chhH--------------------HHHHHHHHHHHHHH
Confidence 210 00 00 0000 00111111223456
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 101 i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~P 149 (381)
T PLN02988 101 MATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFP 149 (381)
T ss_pred HHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCC
Confidence 7889999999999999999999999999999999999999999999988
No 70
>PRK08321 naphthoate synthase; Validated
Probab=99.97 E-value=5.4e-30 Score=225.51 Aligned_cols=151 Identities=24% Similarity=0.347 Sum_probs=115.7
Q ss_pred CcceEEEEee-cCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-------C
Q psy8151 8 TYKTLVVHVP-KQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-------K 79 (220)
Q Consensus 8 ~~~~~~~~~~-~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-------~ 79 (220)
.|.++.++.. +++|++||||||+++|++| .+|+.+|.++++.++.|+++|+|||+|+| +
T Consensus 21 ~~~~i~~~~~~~~~va~itlnrP~~~Nal~-------------~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~ 87 (302)
T PRK08321 21 DFTDITYHRAVDQGTVRIAFDRPEVRNAFR-------------PHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGW 87 (302)
T ss_pred CceeEEEEEecCCCEEEEEeCCcccccCCC-------------HHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCC
Confidence 3667777763 5789999999999999999 99999999999999999999999999998 5
Q ss_pred ceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHH
Q psy8151 80 IFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRK 159 (220)
Q Consensus 80 ~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~ 159 (220)
+||+|.|++++.... ..+..+ + + ... .+.. . ...
T Consensus 88 ~FcaG~Dl~~~~~~~-------------------------------~~~~~~-~-----~-~~~----~~~~---~-~~~ 121 (302)
T PRK08321 88 AFCSGGDQRIRGRDG-------------------------------YQYAEG-D-----E-ADT----VDPA---R-AGR 121 (302)
T ss_pred eeecCcChhhhcccc-------------------------------cccccc-c-----c-ccc----hhhh---H-HHH
Confidence 999999998542100 000000 0 0 000 0000 0 000
Q ss_pred HHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEe-CCceEecccceecccc
Q psy8151 160 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYAT-KDAWFTLKEVDIGKWK 219 (220)
Q Consensus 160 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~-~~a~f~~pe~~~Gl~p 219 (220)
....+++..+..+||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus 122 --~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p 180 (302)
T PRK08321 122 --LHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFD 180 (302)
T ss_pred --HHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCC
Confidence 012235567888999999999999999999999999999999 6899999999999986
No 71
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=99.97 E-value=1.1e-29 Score=216.77 Aligned_cols=136 Identities=21% Similarity=0.304 Sum_probs=110.1
Q ss_pred EEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcce-EEEEecCCCceecCCCcccc
Q psy8151 12 LVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 12 ~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~r-vvvl~g~G~~FsaG~Dl~~~ 90 (220)
+.++. +++|++|+||||++ |+++ .+|+.+|.+++++++.|+++| +||++|.|++||+|.|++++
T Consensus 2 ~~~~~-~~~v~~i~Lnrp~~-Nal~-------------~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~ 66 (239)
T PLN02267 2 CTLEK-RGNLFILTLTGDGE-HRLN-------------PTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWA 66 (239)
T ss_pred ceeEe-cCCEEEEEeCCCCc-CcCC-------------HHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHH
Confidence 34555 78999999999986 9999 999999999999999999875 77778888999999999743
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
... .. .. .....+...+++++.+
T Consensus 67 ~~~------------------------------------~~---------~~------------~~~~~~~~~~~~~~~~ 89 (239)
T PLN02267 67 QAA------------------------------------GS---------AP------------SRLHLMVAKLRPLVAD 89 (239)
T ss_pred hcc------------------------------------cc---------CH------------HHHHHHHHHHHHHHHH
Confidence 200 00 00 0001123345667888
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEe-CCceEecccceeccc-c
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYAT-KDAWFTLKEVDIGKW-K 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~-~~a~f~~pe~~~Gl~-p 219 (220)
|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++ |
T Consensus 90 l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p 140 (239)
T PLN02267 90 LISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLP 140 (239)
T ss_pred HhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCC
Confidence 999999999999999999999999999999998 568999999999996 5
No 72
>PRK08788 enoyl-CoA hydratase; Validated
Probab=99.97 E-value=1.3e-29 Score=221.48 Aligned_cols=148 Identities=16% Similarity=0.186 Sum_probs=111.7
Q ss_pred CCCcceEEEEee-cCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhccc-----CCcceEEEEecC-C
Q psy8151 6 PDTYKTLVVHVP-KQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSE-----NEECRVIILSAA-G 78 (220)
Q Consensus 6 ~~~~~~~~~~~~-~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----d~~~rvvvl~g~-G 78 (220)
+..|.++++..+ +++|++|+|| |+++|++| .+|+.+|.+++++++. |+++|+|||+|. |
T Consensus 11 ~~~~~~~~i~~e~~~~ia~itl~-p~~~Nal~-------------~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~g 76 (287)
T PRK08788 11 AGELSQLRVYYEEERNVMWMYMR-AQPRPCFN-------------LELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVP 76 (287)
T ss_pred ccccCceEEEEEccCCEEEEEEC-CCCCCCCC-------------HHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCC
Confidence 445666655543 5789999996 99999999 9999999999999998 899999999999 7
Q ss_pred CceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHH
Q psy8151 79 KIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILR 158 (220)
Q Consensus 79 ~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~ 158 (220)
++||+|.|++++.... . .+ +- ... .....
T Consensus 77 k~FcaG~Dl~~~~~~~-----------------------------~-----~~-~~-------------~~~---~~~~~ 105 (287)
T PRK08788 77 GVFNLGGDLALFAELI-----------------------------R-----AG-DR-------------DAL---LAYAR 105 (287)
T ss_pred CceEeCcCHHHHhhhc-----------------------------c-----cc-ch-------------HHH---HHHHH
Confidence 9999999997532100 0 00 00 000 00011
Q ss_pred HHHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 159 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 159 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.+...+..+...+ .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 106 ~~~~~~~~l~~~~-~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p 165 (287)
T PRK08788 106 ACVDGVHAFHRGF-GAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFP 165 (287)
T ss_pred HHHHHHHHHHHhc-CCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCC
Confidence 1122222222222 68999999999999999999999999999999999999999999987
No 73
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=99.96 E-value=1.3e-29 Score=214.69 Aligned_cols=132 Identities=29% Similarity=0.384 Sum_probs=110.9
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
.+.++. +++|++|+|||| +.|++| .+++.+|.++++.++ +++|+||++|.|++||+|.|++++
T Consensus 4 ~i~~~~-~~~v~~itln~~-~~Nal~-------------~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~ 66 (229)
T PRK06213 4 LVSYTL-EDGVATITLDDG-KVNALS-------------PAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVM 66 (229)
T ss_pred eEEEEe-cCCEEEEEeCCC-CCCCCC-------------HHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHH
Confidence 467776 789999999998 569999 999999999999998 557999999999999999999743
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
.. . .. ....++..+++++.+
T Consensus 67 ~~--------------------------------------~---------~~-------------~~~~~~~~~~~l~~~ 86 (229)
T PRK06213 67 TS--------------------------------------G---------AQ-------------AAIALLTAGSTLARR 86 (229)
T ss_pred hc--------------------------------------c---------hH-------------hHHHHHHHHHHHHHH
Confidence 20 0 00 011223445567788
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCC-ceEecccceecccc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGKWK 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~-a~f~~pe~~~Gl~p 219 (220)
+.++||||||+|||+|+|||++++++||+|||+++ ++|++||+++|++|
T Consensus 87 l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~ 136 (229)
T PRK06213 87 LLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTM 136 (229)
T ss_pred HHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcC
Confidence 99999999999999999999999999999999999 99999999999975
No 74
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.96 E-value=8.6e-30 Score=226.59 Aligned_cols=130 Identities=26% Similarity=0.377 Sum_probs=109.3
Q ss_pred EEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCcccccccchhhhh
Q psy8151 21 VVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAE 99 (220)
Q Consensus 21 v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~~~~~~~~~~~~ 99 (220)
+++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|.| ++||+|.|++++.+.
T Consensus 38 ~A~ItLNRP~k~NAls-------------~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~------ 98 (360)
T TIGR03200 38 NAWIILDNPKQYNSYT-------------TDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEY------ 98 (360)
T ss_pred EEEEEECCCCccCCCC-------------HHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhh------
Confidence 4569999999999999 99999999999999999999999999999 699999999754310
Q ss_pred hhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcEE
Q psy8151 100 QEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVI 179 (220)
Q Consensus 100 ~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I 179 (220)
..+ .. . ....+...+++++.++..+|||||
T Consensus 99 -----------------------------~~~---------~~-----~-------~~~~~~~~~~~l~~~i~~~pKPVI 128 (360)
T TIGR03200 99 -----------------------------YAG---------NP-----Q-------EYRQYMRLFNDMVSAILGCDKPVI 128 (360)
T ss_pred -----------------------------ccc---------Ch-----h-------HHHHHHHHHHHHHHHHHhCCCCEE
Confidence 000 00 0 011223334567788999999999
Q ss_pred EeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 180 SAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 180 aav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
|+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 129 AAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P 168 (360)
T TIGR03200 129 CRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAP 168 (360)
T ss_pred EEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCC
Confidence 9999999999999999999999999999999999999998
No 75
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=99.96 E-value=1.4e-29 Score=216.13 Aligned_cols=133 Identities=36% Similarity=0.613 Sum_probs=116.1
Q ss_pred EEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccccccc
Q psy8151 14 VHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSL 93 (220)
Q Consensus 14 ~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~ 93 (220)
++. +++|++|+||||++.|++| .+++.+|.++|+.++.|+++|+||++|.++.||+|.|++++..
T Consensus 2 ~~~-~~~v~~i~ln~p~~~N~l~-------------~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~- 66 (245)
T PF00378_consen 2 YEI-EDGVATITLNRPEKRNALN-------------PEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLN- 66 (245)
T ss_dssp EEE-ETTEEEEEEECGGGTTEBS-------------HHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHH-
T ss_pred EEE-ECCEEEEEECCCCCCCCCC-------------HHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhc-
Confidence 455 7899999999999999999 9999999999999999998888888888888888888765431
Q ss_pred chhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy8151 94 GQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLER 173 (220)
Q Consensus 94 ~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (220)
. ..+....+...+++++.++..
T Consensus 67 ----------------------------------------------~------------~~~~~~~~~~~~~~l~~~l~~ 88 (245)
T PF00378_consen 67 ----------------------------------------------S------------DEEEAREFFRRFQELLSRLAN 88 (245)
T ss_dssp ----------------------------------------------H------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------c------------ccccccccchhhccccccchh
Confidence 1 012244566778889999999
Q ss_pred CCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 174 CPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 174 ~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+||||||+|||+|+|||++++++||+||++++++|++||+++|++|
T Consensus 89 ~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p 134 (245)
T PF00378_consen 89 FPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFP 134 (245)
T ss_dssp SSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSS
T ss_pred hhhheeecccccccccccccccccceEEeecccceeeeecccCccc
Confidence 9999999999999999999999999999999999999999999998
No 76
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=99.96 E-value=1.7e-29 Score=244.47 Aligned_cols=140 Identities=27% Similarity=0.474 Sum_probs=118.5
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
++.++..+++|++|+||||+++|++| .+|+.+|.++++.++.|+++|+|||+|+|++||+|.|++++
T Consensus 7 ~i~~~~~~~~v~~itlnrp~~~Nal~-------------~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~ 73 (715)
T PRK11730 7 TLQVDWLEDGIAELVFDAPGSVNKLD-------------RATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEF 73 (715)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCCCCC-------------HHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHH
Confidence 57777557899999999999999999 99999999999999999999999999999999999999753
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
.+. .... . .....+...+++++.+
T Consensus 74 ~~~----------------------------------~~~~----------~------------~~~~~~~~~~~~~~~~ 97 (715)
T PRK11730 74 LSL----------------------------------FAAP----------E------------EELSQWLHFANSIFNR 97 (715)
T ss_pred hhh----------------------------------ccCC----------H------------HHHHHHHHHHHHHHHH
Confidence 210 0000 0 0011233445667788
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|
T Consensus 98 i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p 146 (715)
T PRK11730 98 LEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMP 146 (715)
T ss_pred HHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCC
Confidence 9999999999999999999999999999999999999999999999998
No 77
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=99.96 E-value=4.9e-29 Score=241.09 Aligned_cols=140 Identities=22% Similarity=0.417 Sum_probs=119.0
Q ss_pred eEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccc
Q psy8151 11 TLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGM 90 (220)
Q Consensus 11 ~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~ 90 (220)
.+.++..+++|++|+||||+++|++| .+|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++
T Consensus 7 ~i~~~~~~~gva~Itlnrp~~~Nal~-------------~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~ 73 (714)
T TIGR02437 7 TIQVTALEDGIAELKFDAPGSVNKFD-------------RATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEF 73 (714)
T ss_pred eEEEEEccCCEEEEEECCCCCCCCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHH
Confidence 67777667899999999999999999 99999999999999999999999999999999999999864
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
.+. ...+ . .....+....++++.+
T Consensus 74 ~~~----------------------------------~~~~----------~------------~~~~~~~~~~~~~~~~ 97 (714)
T TIGR02437 74 LGL----------------------------------FALP----------D------------AELIQWLLFANSIFNK 97 (714)
T ss_pred hhc----------------------------------ccCC----------H------------HHHHHHHHHHHHHHHH
Confidence 310 0000 0 0011223345667788
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|
T Consensus 98 i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~P 146 (714)
T TIGR02437 98 LEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMP 146 (714)
T ss_pred HHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCC
Confidence 9999999999999999999999999999999999999999999999998
No 78
>KOG1680|consensus
Probab=99.96 E-value=1.7e-29 Score=215.05 Aligned_cols=137 Identities=29% Similarity=0.466 Sum_probs=111.5
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCccc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG 89 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~ 89 (220)
..+.+...+++|+.|+||||.++|+++ ..++.||.+++..++.|+.++++||+|.|+.||||+|+.+
T Consensus 36 ~~~~~~~~d~~I~lItlNRP~~~Nal~-------------~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e 102 (290)
T KOG1680|consen 36 IKIELVGEDNGIALITLNRPKALNALC-------------RATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKE 102 (290)
T ss_pred ceeEEeecCCCeEEEEeCChHHhcccc-------------HHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHH
Confidence 344555558899999999999999999 9999999999999999999999999999999999999987
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+....-. .++-+. +...+.
T Consensus 103 ~~~~~~~-----------------------------~~~~~~--------------------------------~~~~~~ 121 (290)
T KOG1680|consen 103 MKKDEFQ-----------------------------DVSDGI--------------------------------FLRVWD 121 (290)
T ss_pred Hhhcccc-----------------------------cccccc--------------------------------ccchhh
Confidence 6521100 000000 011122
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccccC
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWKT 220 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p~ 220 (220)
.+.+.+||+||+|||+|+|||+||+++||+|||+++|+|+++|.++|++|-
T Consensus 122 ~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~ 172 (290)
T KOG1680|consen 122 LVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPS 172 (290)
T ss_pred hhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccC
Confidence 233689999999999999999999999999999999999999999999983
No 79
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=99.95 E-value=2.1e-28 Score=229.88 Aligned_cols=153 Identities=14% Similarity=0.202 Sum_probs=119.6
Q ss_pred CcceEEEEee-cCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhccc-CCcceEEEEecCC-CceecC
Q psy8151 8 TYKTLVVHVP-KQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSE-NEECRVIILSAAG-KIFTAG 84 (220)
Q Consensus 8 ~~~~~~~~~~-~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-d~~~rvvvl~g~G-~~FsaG 84 (220)
.|+++.++.+ +++|++||||||+++|+++..=..-+..|++|.+|+.+|.+++++++. |+++|+|||+|+| ++||+|
T Consensus 258 ~~~~~~v~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG 337 (550)
T PRK08184 258 RYRHVDVEIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLA 337 (550)
T ss_pred eeEEEEEEEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeC
Confidence 4666666654 578999999999999765433333445566669999999999999986 7999999999999 599999
Q ss_pred CCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHH
Q psy8151 85 LDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 164 (220)
Q Consensus 85 ~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (220)
.|++... .... . . . ......+
T Consensus 338 ~Dl~~~~------------------------------------~~~~-~--~-----~---------------~~~~~~~ 358 (550)
T PRK08184 338 ADATLLA------------------------------------HKDH-W--L-----V---------------RETRGYL 358 (550)
T ss_pred CChhhhc------------------------------------ccch-H--H-----H---------------HHHHHHH
Confidence 9986210 0000 0 0 0 0011234
Q ss_pred HHHHHhhhcCCCcEEEeec-Cccccch-hhhhhhccEEEEe-------CCceEecccceecccc
Q psy8151 165 QKSISSLERCPKPVISAVH-GACIGGG-MSLITAADIRYAT-------KDAWFTLKEVDIGKWK 219 (220)
Q Consensus 165 ~~~~~~l~~~~kp~Iaav~-G~a~GgG-~~lal~cD~rva~-------~~a~f~~pe~~~Gl~p 219 (220)
+.++.+|.++||||||+|| |+|+||| ++|+++||+|||+ ++++|++||+++|++|
T Consensus 359 ~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p 422 (550)
T PRK08184 359 RRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYP 422 (550)
T ss_pred HHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCC
Confidence 4567789999999999997 9999999 9999999999999 9999999999999998
No 80
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=99.95 E-value=5.8e-28 Score=234.20 Aligned_cols=142 Identities=28% Similarity=0.446 Sum_probs=118.7
Q ss_pred CCCcceEEEEeecCcEEEEEEcCCC-CCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEE-EEecCCCceec
Q psy8151 6 PDTYKTLVVHVPKQFVVHVELNRPD-KLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVI-ILSAAGKIFTA 83 (220)
Q Consensus 6 ~~~~~~~~~~~~~~~v~~i~ln~p~-~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvv-vl~g~G~~Fsa 83 (220)
.+.++++.++. +++|++|+||||+ +.|++| .+++.+|.+++++++.|+++|++ |++|.|++||+
T Consensus 9 ~~~~~~~~~~~-~~gVa~itlnrP~~~~Nal~-------------~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~a 74 (737)
T TIGR02441 9 LMARTHRHYEV-KGDVAVVKIDSPNSKVNTLS-------------KELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVA 74 (737)
T ss_pred CCCCCeEEEEE-ECCEEEEEEcCCCCCCCCCC-------------HHHHHHHHHHHHHHhhCCCCEEEEEEECCCCccee
Confidence 44667788887 7899999999998 589999 99999999999999999999975 56899999999
Q ss_pred CCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHH
Q psy8151 84 GLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITT 163 (220)
Q Consensus 84 G~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 163 (220)
|.|++++.+. . + .. ....+...
T Consensus 75 G~Dl~~~~~~-------------------------------------~-------~-~~-------------~~~~~~~~ 96 (737)
T TIGR02441 75 GADIQMIAAC-------------------------------------K-------T-AQ-------------EVTQLSQE 96 (737)
T ss_pred CcCHHHHhcc-------------------------------------C-------C-hH-------------HHHHHHHH
Confidence 9999864310 0 0 00 01122344
Q ss_pred HHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCC--ceEecccceecccc
Q psy8151 164 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGKWK 219 (220)
Q Consensus 164 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~--a~f~~pe~~~Gl~p 219 (220)
+++++.+|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|
T Consensus 97 ~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~P 154 (737)
T TIGR02441 97 GQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLP 154 (737)
T ss_pred HHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCC
Confidence 567788899999999999999999999999999999999987 58999999999998
No 81
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=99.95 E-value=9.8e-28 Score=224.94 Aligned_cols=146 Identities=21% Similarity=0.326 Sum_probs=115.9
Q ss_pred CCCCcceEEEEeecCcEEEEEEcCCC----------CCCcCCcCCCccchhhhchHHHHHHHHHHHHhcc-cCCcceEEE
Q psy8151 5 TPDTYKTLVVHVPKQFVVHVELNRPD----------KLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLS-ENEECRVII 73 (220)
Q Consensus 5 ~~~~~~~~~~~~~~~~v~~i~ln~p~----------~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~d~~~rvvv 73 (220)
.|+.|+++.++. +++|++|+||||+ |+|++| .+|+.+|.+++++++ .|+++|+||
T Consensus 6 ~~~~~~~v~~~~-~g~Va~ItLnrpe~~~~~p~~~~k~Nal~-------------~~~l~eL~~al~~~~~~d~~vRvVV 71 (546)
T TIGR03222 6 EPSQYRHWKLTF-DGPVATLTMDVDEDGGLRPGYKLKLNSYD-------------LGVDIELHDAVQRIRFEHPEVRTVV 71 (546)
T ss_pred CCCCCceEEEEe-eCCEEEEEEecccccccCccccccCCCCC-------------HHHHHHHHHHHHHHHhcCCCeeEEE
Confidence 467789999998 6899999999976 899999 999999999999999 799999999
Q ss_pred EecC-CCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHH
Q psy8151 74 LSAA-GKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVAR 152 (220)
Q Consensus 74 l~g~-G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~ 152 (220)
|+|. |++||+|.|++++... ... .. ...
T Consensus 72 Ltg~~Gk~FcaG~DL~~~~~~------------------------------~~~---~~---~~~--------------- 100 (546)
T TIGR03222 72 MTSGKDRVFCSGANIFMLGLS------------------------------THA---WK---VNF--------------- 100 (546)
T ss_pred EecCCCCCCcCCcCHHHHhcc------------------------------ccc---hh---hhH---------------
Confidence 9997 5999999999853210 000 00 000
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCC--ceEecccce-ecccc
Q psy8151 153 KSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVD-IGKWK 219 (220)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~--a~f~~pe~~-~Gl~p 219 (220)
.... ......+...++.+||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|
T Consensus 101 -~~~~---~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P 166 (546)
T TIGR03222 101 -CKFT---NETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLP 166 (546)
T ss_pred -HHHH---HHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCC
Confidence 0000 011122344567899999999999999999999999999999986 799999997 99998
No 82
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=99.95 E-value=1.6e-27 Score=230.56 Aligned_cols=137 Identities=26% Similarity=0.482 Sum_probs=114.7
Q ss_pred EEEEeecCcEEEEEEcCC-CCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCccc
Q psy8151 12 LVVHVPKQFVVHVELNRP-DKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSG 89 (220)
Q Consensus 12 ~~~~~~~~~v~~i~ln~p-~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~~ 89 (220)
+.++.++++|++|+|||| +++|++| .+|+.+|.+++++++.|+++|+|||+|.+ ++||+|.|+++
T Consensus 7 ~~~~~~~~~va~itlnrp~~~~Nal~-------------~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~ 73 (708)
T PRK11154 7 FTLNVREDNIAVITIDVPGEKMNTLK-------------AEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINM 73 (708)
T ss_pred EEEEEcCCCEEEEEECCCCCCCcCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHH
Confidence 556665789999999999 6899999 99999999999999999999999999875 89999999985
Q ss_pred ccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy8151 90 MLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 169 (220)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (220)
+.... .. . + ...+...+++++.
T Consensus 74 ~~~~~-----------------------------------~~----------~------~-------~~~~~~~~~~~~~ 95 (708)
T PRK11154 74 LAACK-----------------------------------TA----------Q------E-------AEALARQGQQLFA 95 (708)
T ss_pred hhccC-----------------------------------CH----------H------H-------HHHHHHHHHHHHH
Confidence 32100 00 0 0 0112234556778
Q ss_pred hhhcCCCcEEEeecCccccchhhhhhhccEEEEeCC--ceEecccceecccc
Q psy8151 170 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGKWK 219 (220)
Q Consensus 170 ~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~--a~f~~pe~~~Gl~p 219 (220)
+|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|
T Consensus 96 ~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p 147 (708)
T PRK11154 96 EIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLP 147 (708)
T ss_pred HHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCC
Confidence 899999999999999999999999999999999987 48999999999987
No 83
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=99.95 E-value=2e-27 Score=222.92 Aligned_cols=140 Identities=18% Similarity=0.278 Sum_probs=113.2
Q ss_pred CcceEEEEee-cCcEEEEEEcCCCCC-------------CcCCcCCCccchhhhchHHHHHHHHHHHHhccc-CCcceEE
Q psy8151 8 TYKTLVVHVP-KQFVVHVELNRPDKL-------------NAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSE-NEECRVI 72 (220)
Q Consensus 8 ~~~~~~~~~~-~~~v~~i~ln~p~~~-------------Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-d~~~rvv 72 (220)
.|.++.+... +++|++||||||+++ |+++ .+|+.+|.++++.++. |+++|+|
T Consensus 254 ~~~~~~v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~-------------~~~~~~L~~a~~~~~~~d~~vr~v 320 (546)
T TIGR03222 254 RYPTVDVAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWP-------------LKLARELDDAILHLRTNELDIGLW 320 (546)
T ss_pred ceeeEEEEEeccCCEEEEEecChhhcCccccccccccccCcCC-------------HHHHHHHHHHHHHHhhCCCCeEEE
Confidence 3555555432 678999999999999 7777 9999999999999984 5999999
Q ss_pred EEecCCCc-eecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHH
Q psy8151 73 ILSAAGKI-FTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVA 151 (220)
Q Consensus 73 vl~g~G~~-FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~ 151 (220)
||+|+|+. ||+|.|+..... . ....
T Consensus 321 Vl~g~G~~~F~aG~Dl~~~~~--------------------------------~----~~~~------------------ 346 (546)
T TIGR03222 321 VFRTQGDAELVLAADALLEAH--------------------------------K----DHWF------------------ 346 (546)
T ss_pred EEEcCCCCceecCcCcccccc--------------------------------c----cchh------------------
Confidence 99999987 999999962110 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcEEEee-cCccccch-hhhhhhccEEEE-------eCCceEecccceecccc
Q psy8151 152 RKSKILRKLITTYQKSISSLERCPKPVISAV-HGACIGGG-MSLITAADIRYA-------TKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav-~G~a~GgG-~~lal~cD~rva-------~~~a~f~~pe~~~Gl~p 219 (220)
....+..+++++.+|.++|||+||+| ||+|+||| ++|+++||+||+ +++++|++||+++|++|
T Consensus 347 -----~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p 418 (546)
T TIGR03222 347 -----VRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYP 418 (546)
T ss_pred -----HHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCC
Confidence 00111233556788999999999999 89999999 999999999999 89999999999999998
No 84
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=99.94 E-value=2.1e-26 Score=216.39 Aligned_cols=145 Identities=22% Similarity=0.355 Sum_probs=114.2
Q ss_pred CCCcceEEEEeecCcEEEEEEcCCC----------CCCcCCcCCCccchhhhchHHHHHHHHHHHHhcc-cCCcceEEEE
Q psy8151 6 PDTYKTLVVHVPKQFVVHVELNRPD----------KLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLS-ENEECRVIIL 74 (220)
Q Consensus 6 ~~~~~~~~~~~~~~~v~~i~ln~p~----------~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~d~~~rvvvl 74 (220)
++.|+++.++. +++|++|+||||+ ++|+++ .+|+.+|.+++++++ .|+++|+|||
T Consensus 11 ~~~~~~~~~e~-~~~Va~ItLnrpe~~~~rP~~~~~~Nal~-------------~~m~~eL~~al~~~~~~d~~vrvVVL 76 (550)
T PRK08184 11 PSQYRHWKLSF-DGPVATLTMDVDEDGGLRPGYKLKLNSYD-------------LGVDIELHDALQRIRFEHPEVRTVVV 76 (550)
T ss_pred CCCCceEEEEe-eCCEEEEEEcCccccccCcccccCCCCCC-------------HHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 45688999998 6899999999654 889999 999999999999999 7999999999
Q ss_pred ecCC-CceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHH
Q psy8151 75 SAAG-KIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARK 153 (220)
Q Consensus 75 ~g~G-~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~ 153 (220)
+|.+ ++||+|.|++++... ... . .. ..+
T Consensus 77 tg~ggk~FcaG~DL~~~~~~------------------------------~~~----~-~~-~~~--------------- 105 (550)
T PRK08184 77 TSAKDRVFCSGANIFMLGGS------------------------------SHA----W-KV-NFC--------------- 105 (550)
T ss_pred ecCCCCCCCCccCHHhHhcc------------------------------ccc----h-hh-hHH---------------
Confidence 9985 999999999854210 000 0 00 000
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCC--ceEecccce-ecccc
Q psy8151 154 SKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVD-IGKWK 219 (220)
Q Consensus 154 ~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~--a~f~~pe~~-~Gl~p 219 (220)
..... ....+...+.++||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|
T Consensus 106 -~~~~~---~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P 170 (550)
T PRK08184 106 -KFTNE---TRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLP 170 (550)
T ss_pred -HHHHH---HHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCC
Confidence 00001 1122334567899999999999999999999999999999987 899999997 99998
No 85
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=99.94 E-value=2.8e-26 Score=188.40 Aligned_cols=136 Identities=40% Similarity=0.608 Sum_probs=117.8
Q ss_pred EEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccc
Q psy8151 13 VVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS 92 (220)
Q Consensus 13 ~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~ 92 (220)
.++. +++|++|+||+|++.|++| .+++.+|.++++.++.|+++|+||++|.++.||+|.|+.++..
T Consensus 2 ~~~~-~~~i~~i~l~~~~~~N~~~-------------~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~ 67 (195)
T cd06558 2 LVER-DGGVATITLNRPEKRNALS-------------LEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAA 67 (195)
T ss_pred EEEE-ECCEEEEEECCccccCCCC-------------HHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhc
Confidence 3455 5789999999999899999 9999999999999999999999999999999999999986542
Q ss_pred cchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy8151 93 LGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLE 172 (220)
Q Consensus 93 ~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (220)
.... . + ...++...+++++.++.
T Consensus 68 ~~~~-----------------------------~------~----------------------~~~~~~~~~~~~~~~i~ 90 (195)
T cd06558 68 LSDA-----------------------------G------E----------------------EARAFIRELQELLRALL 90 (195)
T ss_pred cccc-----------------------------c------h----------------------hHHHHHHHHHHHHHHHH
Confidence 1000 0 0 12345566788889999
Q ss_pred cCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 173 RCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 173 ~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.+|||+||+|||+|.|+|++++++||+||++++++|++||+++|++|
T Consensus 91 ~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p 137 (195)
T cd06558 91 RLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVP 137 (195)
T ss_pred cCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCC
Confidence 99999999999999999999999999999999999999999999987
No 86
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=99.94 E-value=4.5e-26 Score=220.22 Aligned_cols=136 Identities=27% Similarity=0.454 Sum_probs=113.1
Q ss_pred EEEeecCcEEEEEEcCC-CCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEE-ecCCCceecCCCcccc
Q psy8151 13 VVHVPKQFVVHVELNRP-DKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIIL-SAAGKIFTAGLDLSGM 90 (220)
Q Consensus 13 ~~~~~~~~v~~i~ln~p-~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl-~g~G~~FsaG~Dl~~~ 90 (220)
.++..+++|++|+|||| +++|++| .+|+.+|.+++++++.|+++|+||| +|.|++||+|.|++++
T Consensus 3 ~~~~~~~~Va~itlnrp~~~~Nal~-------------~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~ 69 (699)
T TIGR02440 3 TLTVREDGIAILTIDVPGEKMNTLK-------------AEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISML 69 (699)
T ss_pred EEEEcCCCEEEEEECCCCCCCCCCC-------------HHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhh
Confidence 34555789999999999 6899999 9999999999999999999999986 5678999999999854
Q ss_pred cccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy8151 91 LSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 170 (220)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
... . + .. ....+...+++++.+
T Consensus 70 ~~~------------------------------~--------~-------~~-------------~~~~~~~~~~~~~~~ 91 (699)
T TIGR02440 70 AAC------------------------------Q--------T-------AG-------------EAKALAQQGQVLFAE 91 (699)
T ss_pred hcc------------------------------C--------C-------hh-------------HHHHHHHHHHHHHHH
Confidence 310 0 0 00 011223345667788
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCC--ceEecccceecccc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGKWK 219 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~--a~f~~pe~~~Gl~p 219 (220)
|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|
T Consensus 92 l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p 142 (699)
T TIGR02440 92 LEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLP 142 (699)
T ss_pred HHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCC
Confidence 99999999999999999999999999999999986 79999999999988
No 87
>KOG1679|consensus
Probab=99.93 E-value=5.6e-26 Score=187.34 Aligned_cols=132 Identities=29% Similarity=0.483 Sum_probs=116.7
Q ss_pred eecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCcccccccc
Q psy8151 16 VPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLG 94 (220)
Q Consensus 16 ~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~~~~~~~ 94 (220)
..+.+|..|-+|||.+.|+++ ..|+++|.++++++..|+.+|+|+++|-- ..||+|.||+|-.
T Consensus 36 g~~~GItvl~mNRpa~kNsl~-------------r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~--- 99 (291)
T KOG1679|consen 36 GKDEGITILNMNRPAKKNSLG-------------RVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERK--- 99 (291)
T ss_pred CCCCCeEEEecCChhhhccHH-------------HHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhh---
Confidence 347799999999999999999 99999999999999999999999998876 6777777776522
Q ss_pred hhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy8151 95 QEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERC 174 (220)
Q Consensus 95 ~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (220)
..+ +.....|++.++.++..+.++
T Consensus 100 --------------------------------------------~Ms------------~~Ev~~fV~~lR~~~~dIe~L 123 (291)
T KOG1679|consen 100 --------------------------------------------TMS------------PSEVTRFVNGLRGLFNDIERL 123 (291)
T ss_pred --------------------------------------------cCC------------HHHHHHHHHHHHHHHHHHHhC
Confidence 111 134567888889999999999
Q ss_pred CCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 175 PKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 175 ~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
|+||||+|+|.++|||+||+++||+|+|+++++|+++|++++|+|
T Consensus 124 p~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiP 168 (291)
T KOG1679|consen 124 PQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIP 168 (291)
T ss_pred Cccceehhcchhcccchhhhhhccceehhhhccccccccceeeec
Confidence 999999999999999999999999999999999999999999998
No 88
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=99.90 E-value=2.9e-24 Score=177.44 Aligned_cols=142 Identities=25% Similarity=0.375 Sum_probs=114.5
Q ss_pred CCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecC--C-Cceec
Q psy8151 7 DTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAA--G-KIFTA 83 (220)
Q Consensus 7 ~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~--G-~~Fsa 83 (220)
..|+.|.+++..++|+.|++|||+++|++. +.+..|+.+++..+..|+++-||+|||+ | .+||+
T Consensus 15 ~~y~dI~Y~~~~~giakItinRPevrNAfr-------------P~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCs 81 (282)
T COG0447 15 EGYEDITYEKSVDGIAKITINRPEVRNAFR-------------PKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCS 81 (282)
T ss_pred CCcceeEEeeccCceEEEEecChhhhccCC-------------CccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeec
Confidence 368999999966899999999999999999 9999999999999999999999999986 4 89999
Q ss_pred CCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHH
Q psy8151 84 GLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITT 163 (220)
Q Consensus 84 G~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 163 (220)
|+|-+- .+++..+.+.-. .. + + .
T Consensus 82 GGDQ~v--------------------------------Rg~~~gY~~d~~-------~~---------r----L-----n 104 (282)
T COG0447 82 GGDQKV--------------------------------RGDSGGYVDDDG-------IP---------R----L-----N 104 (282)
T ss_pred CCCcee--------------------------------cccCCCccCCcc-------Cc---------c----c-----c
Confidence 999762 222100100000 00 0 0 1
Q ss_pred HHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccc
Q psy8151 164 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKW 218 (220)
Q Consensus 164 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~ 218 (220)
.-++-+.|+.+||||||.|+|+++|||-.|-+.||+.||+++|+|+....++|-+
T Consensus 105 vLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSF 159 (282)
T COG0447 105 VLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSF 159 (282)
T ss_pred hhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccc
Confidence 1123346788999999999999999999999999999999999999999998853
No 89
>KOG1684|consensus
Probab=99.89 E-value=1e-22 Score=178.64 Aligned_cols=150 Identities=26% Similarity=0.372 Sum_probs=125.0
Q ss_pred CCCCCCCCc-ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-
Q psy8151 1 MASFTPDTY-KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG- 78 (220)
Q Consensus 1 ~~~~~~~~~-~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G- 78 (220)
|+++..... ..+.++. ++....|+||||..+||+| .+|...+.-.|...+.++.+++||+.|.+
T Consensus 28 ~~~~~~~~~~~~VL~e~-~~~~r~itLNRPKaLNAln-------------leMv~~~~~~L~~we~s~~~k~vIlkgs~~ 93 (401)
T KOG1684|consen 28 MASSVSTDSKDQVLVEG-KGCARVITLNRPKALNALN-------------LEMVLSIYPKLVEWEKSPLVKLVILKGSGG 93 (401)
T ss_pred cccccccccCCceEEec-CCceeEEEecCchhhcccc-------------HHHHHHHHHHHHhhccCCCceEEEEecCCC
Confidence 343444444 4566666 8899999999999999999 99999999999999999999999999995
Q ss_pred CceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHH
Q psy8151 79 KIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILR 158 (220)
Q Consensus 79 ~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~ 158 (220)
++||||+|+....+... | . .....+
T Consensus 94 raFCAGgDI~~~ae~~~-------------------------------------------d--~----------~~~~~~ 118 (401)
T KOG1684|consen 94 RAFCAGGDIKAVAESIK-------------------------------------------D--K----------ETPEVK 118 (401)
T ss_pred ceeecCccHHHHHHHhh-------------------------------------------c--C----------CchHHH
Confidence 99999988863221100 0 0 012356
Q ss_pred HHHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 159 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 159 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
.+++....+...|.+..||.||.+||..+|||++|...--||||+|++.|.+||+.||++|
T Consensus 119 ~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfP 179 (401)
T KOG1684|consen 119 KFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFP 179 (401)
T ss_pred HHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceeccccccccccc
Confidence 7778888889999999999999999999999999999999999999999999999999998
No 90
>KOG0016|consensus
Probab=99.88 E-value=7.3e-22 Score=166.88 Aligned_cols=149 Identities=25% Similarity=0.450 Sum_probs=123.5
Q ss_pred CCCCcceEEEEeecCcEEEEEEc-CCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceec
Q psy8151 5 TPDTYKTLVVHVPKQFVVHVELN-RPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTA 83 (220)
Q Consensus 5 ~~~~~~~~~~~~~~~~v~~i~ln-~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~Fsa 83 (220)
+.++|+.++++. ++++.+|.+| ||+|.|+++ .+++.++.++|+.+..|+.+..++++|.|..||+
T Consensus 2 ~~~~~~~~vv~~-~~g~~~I~~~~~Pkk~Nal~-------------~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~s 67 (266)
T KOG0016|consen 2 SAMRYREIVVTR-ENGPFFIALNIRPKKKNALN-------------REDYVYIQRALEEANDDDSVSITVLSSNGSYFCS 67 (266)
T ss_pred CcccccceEEEe-cCCcEEEEecCCCccccccc-------------HHHHHHHHHHHHHhhcccceEEEEEecCccEEee
Confidence 356788999998 7999999999 999999999 9999999999999999999999999999999999
Q ss_pred CCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHH
Q psy8151 84 GLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITT 163 (220)
Q Consensus 84 G~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 163 (220)
|.|++.+....+ +... ..+....++...
T Consensus 68 G~Df~~~~~~~~-----------------------------~d~~-----------------------~~~~~~~~~v~~ 95 (266)
T KOG0016|consen 68 GLDFSPFAKALD-----------------------------DDAN-----------------------EESDKASKFVKN 95 (266)
T ss_pred ccccchhhhcCC-----------------------------Cccc-----------------------ccchhhHHHHHH
Confidence 999985442111 0000 001122233334
Q ss_pred HHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 164 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 164 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+......+..+|||+||.|||+|+|.|..+.-.||+++|+|+++|..|++++|..|
T Consensus 96 ~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~P 151 (266)
T KOG0016|consen 96 VSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSP 151 (266)
T ss_pred HHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCC
Confidence 44567788899999999999999999999999999999999999999999999998
No 91
>KOG1682|consensus
Probab=99.87 E-value=3e-22 Score=164.28 Aligned_cols=145 Identities=27% Similarity=0.420 Sum_probs=119.1
Q ss_pred CCCCCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceec
Q psy8151 4 FTPDTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTA 83 (220)
Q Consensus 4 ~~~~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~Fsa 83 (220)
|+..........+.+++|..|+||+|.|+|.++ ..|+.+|.+.|..-....++|+||++..|+.||+
T Consensus 25 f~s~~p~~~g~~~~~~gvR~i~l~npKk~NtLS-------------LaM~~~Lq~~ll~d~d~~dlr~viita~GkifSa 91 (287)
T KOG1682|consen 25 FTSNGPSDLGLVKEHNGVREITLNNPKKLNTLS-------------LAMMCALQDALLKDKDNLDLRCVIITAQGKIFSA 91 (287)
T ss_pred HhhcCcccccccccccceeeeeecCccccchhh-------------HHHHHHHHHHHhhcccccceeEEEEecCCccccc
Confidence 444444445555557899999999999999999 9999999999999998887888888777777777
Q ss_pred CCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHH
Q psy8151 84 GLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITT 163 (220)
Q Consensus 84 G~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 163 (220)
|+||+|+-. ... ++.-.+.+..
T Consensus 92 GH~LKELt~-----------------------------------------------e~g-----------~d~haevFqt 113 (287)
T KOG1682|consen 92 GHNLKELTN-----------------------------------------------EPG-----------SDIHAEVFQT 113 (287)
T ss_pred cccHHHhhc-----------------------------------------------Ccc-----------chHHHHHHHH
Confidence 777765431 111 1123355677
Q ss_pred HHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 164 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 164 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
..+++.-|+++|+|||+.|||++.++||.|...||++||+++++|..|..++|++.
T Consensus 114 c~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFC 169 (287)
T KOG1682|consen 114 CTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFC 169 (287)
T ss_pred HHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEe
Confidence 88889999999999999999999999999999999999999999999999999974
No 92
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.44 E-value=4.1e-13 Score=109.50 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=45.3
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceec
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~G 216 (220)
+.+..+.+++|||||++||.|.|+|+.++++||+++++++++|+.+++..+
T Consensus 62 ~~i~~~~~~~kpVia~v~G~a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~ 112 (177)
T cd07014 62 AELAAARAAGKPVVASGGGNAASGGYWISTPANYIVANPSTLVGSIGIFGV 112 (177)
T ss_pred HHHHHHHhCCCCEEEEECCchhHHHHHHHHhCCEEEECCCCeEEEechHhh
Confidence 345667778999999999999999999999999999999999999876543
No 93
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.30 E-value=1.5e-11 Score=103.12 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEecCceee
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFT 129 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg 129 (220)
...+.+|.++|+++..|+++|+|+|+ .||+|+|+.
T Consensus 20 ~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~----------------------------------------- 54 (211)
T cd07019 20 NVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVT----------------------------------------- 54 (211)
T ss_pred ccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHH-----------------------------------------
Confidence 44578999999999999988888885 566665553
Q ss_pred eecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEe
Q psy8151 130 AGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFT 209 (220)
Q Consensus 130 ~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~ 209 (220)
... .+.+.+..++.++||+||.++|+|.|+|+.|+++||+++++++++|+
T Consensus 55 ------~~~------------------------~~~~~l~~~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~g 104 (211)
T cd07019 55 ------ASE------------------------VIRAELAAARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTG 104 (211)
T ss_pred ------HHH------------------------HHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEE
Confidence 110 11223456677899999999999999999999999999999999988
Q ss_pred c
Q psy8151 210 L 210 (220)
Q Consensus 210 ~ 210 (220)
.
T Consensus 105 s 105 (211)
T cd07019 105 S 105 (211)
T ss_pred E
Confidence 3
No 94
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.20 E-value=1.3e-10 Score=97.60 Aligned_cols=45 Identities=24% Similarity=0.225 Sum_probs=38.5
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 213 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~ 213 (220)
+..+.. +|||||+++|.|.|+|+.++++||++++++++.|+...+
T Consensus 67 l~~~~~-~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~iG~ 111 (214)
T cd07022 67 IRAARA-GKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSIGV 111 (214)
T ss_pred HHHHhc-CCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEeeeE
Confidence 334444 699999999999999999999999999999999876543
No 95
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.14 E-value=1.9e-10 Score=94.70 Aligned_cols=51 Identities=16% Similarity=0.129 Sum_probs=45.5
Q ss_pred HHHhhhcCCCcEEEeec---CccccchhhhhhhccEEEEeCCceEecccceecc
Q psy8151 167 SISSLERCPKPVISAVH---GACIGGGMSLITAADIRYATKDAWFTLKEVDIGK 217 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~---G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl 217 (220)
++..|..+|||||++|+ |+|.|||+.++++||++|++++++|+.+++..+.
T Consensus 50 i~~~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~ 103 (187)
T cd07020 50 IVQAILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIG 103 (187)
T ss_pred HHHHHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccC
Confidence 34456678999999999 9999999999999999999999999999987543
No 96
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.08 E-value=6.4e-10 Score=92.91 Aligned_cols=47 Identities=26% Similarity=0.318 Sum_probs=41.3
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 213 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~ 213 (220)
.+..+..++||+||+++|.|.|+|+.++++||.+++++.+.|+...+
T Consensus 58 ~i~~~~~~~kpvia~v~g~~~s~g~~lA~aaD~i~a~~~s~~g~iG~ 104 (208)
T cd07023 58 EIRRLRKAKKPVVASMGDVAASGGYYIAAAADKIVANPTTITGSIGV 104 (208)
T ss_pred HHHHHHhcCCcEEEEECCcchhHHHHHHhhCCEEEECCCCeEEeCcE
Confidence 35566778999999999999999999999999999999999876543
No 97
>KOG1681|consensus
Probab=99.04 E-value=3.4e-11 Score=100.83 Aligned_cols=41 Identities=27% Similarity=0.364 Sum_probs=36.5
Q ss_pred hhhHHHHhhhccccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 101 EDIGECFDSLSENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 101 ~~i~~~~~~~~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+.|..+++.+.++.+|+||||++ ||.|.|+|.||.-+||+.
T Consensus 110 r~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIR 151 (292)
T KOG1681|consen 110 RIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIR 151 (292)
T ss_pred HHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeeccee
Confidence 45667788888888999999999 999999999999999964
No 98
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=98.93 E-value=3.3e-09 Score=84.76 Aligned_cols=50 Identities=24% Similarity=0.235 Sum_probs=43.6
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGK 217 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl 217 (220)
...|..++||||+.++|.|.++|+.++++||.|++.+++.|++.++..+.
T Consensus 50 ~~~l~~~~kpvva~~~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~ 99 (161)
T cd00394 50 VDALQASRKPVIAYVGGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGY 99 (161)
T ss_pred HHHHHHhCCCEEEEECChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEec
Confidence 34456678999999999999999999999999999999999988776543
No 99
>KOG1680|consensus
Probab=98.86 E-value=1.1e-09 Score=94.17 Aligned_cols=28 Identities=25% Similarity=0.337 Sum_probs=25.8
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
..+||||++ +|.++|||++|.++||+.-
T Consensus 125 ~~~KPvIaainG~AlgGG~ELalmCDirv 153 (290)
T KOG1680|consen 125 RLKKPVIAAINGFALGGGLELALMCDIRV 153 (290)
T ss_pred hcccceeEeeeceeeccchhhhhhcceEe
Confidence 689999999 9999999999999999753
No 100
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=98.70 E-value=6.5e-09 Score=88.61 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=27.2
Q ss_pred ccccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 111 SENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 111 ~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 84 ~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ 115 (245)
T PF00378_consen 84 SRLANFPKPTIAAVNGHAVGGGFELALACDFR 115 (245)
T ss_dssp HHHHHSSSEEEEEESSEEETHHHHHHHHSSEE
T ss_pred ccchhhhhheeecccccccccccccccccceE
Confidence 3444899999999 999999999999999964
No 101
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=98.69 E-value=7.7e-08 Score=80.45 Aligned_cols=44 Identities=27% Similarity=0.338 Sum_probs=37.7
Q ss_pred hhhcCC--CcEEEeecCccccchhhhhhhccEEEEeCCceEecccc
Q psy8151 170 SLERCP--KPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 213 (220)
Q Consensus 170 ~l~~~~--kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~ 213 (220)
.|.+++ ||+||.++|.|.++|+.++++||.++|++++.++...+
T Consensus 54 ~i~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~iGv 99 (207)
T TIGR00706 54 KLKKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGSIGV 99 (207)
T ss_pred HHHHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEeeeE
Confidence 344444 99999999999999999999999999999998876444
No 102
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=98.61 E-value=2.5e-07 Score=75.80 Aligned_cols=50 Identities=22% Similarity=0.213 Sum_probs=44.4
Q ss_pred HHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccce
Q psy8151 165 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVD 214 (220)
Q Consensus 165 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~ 214 (220)
..++..|.++|+|||+.|+|.|.++|..++++||++++++++.|+.+++-
T Consensus 48 ~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v 97 (178)
T cd07021 48 LEIVDLILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEPI 97 (178)
T ss_pred HHHHHHHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCeeE
Confidence 34466677889999999999999999999999999999999999987653
No 103
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=98.56 E-value=9.9e-08 Score=76.39 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=45.9
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceeccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKW 218 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~ 218 (220)
++..|..+|||||+.++|.|.|+|+.++++||.|+++++++|++.+...+..
T Consensus 50 i~~~i~~~~~pvi~~v~g~a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~ 101 (160)
T cd07016 50 IYNALKRHKGKVTVKIDGLAASAASVIAMAGDEVEMPPNAMLMIHNPSTGAA 101 (160)
T ss_pred HHHHHHhcCCCEEEEEcchHHhHHHHHHhcCCeEEECCCcEEEEECCccccC
Confidence 4555677899999999999999999999999999999999999987766554
No 104
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=98.55 E-value=1.7e-07 Score=79.14 Aligned_cols=46 Identities=26% Similarity=0.342 Sum_probs=39.2
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 213 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~ 213 (220)
.+..+...+|||||.++| |.+||+.++++||.+++.+.+.|+...+
T Consensus 70 ~i~~~~~~~kpVia~~~~-~~sggy~lasaad~I~a~p~~~vg~iGv 115 (222)
T cd07018 70 ALERFRASGKPVIAYADG-YSQGQYYLASAADEIYLNPSGSVELTGL 115 (222)
T ss_pred HHHHHHHhCCeEEEEeCC-CCchhhhhhhhCCEEEECCCceEEeecc
Confidence 344555679999999998 8899999999999999999999887543
No 105
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.52 E-value=6.3e-08 Score=94.41 Aligned_cols=30 Identities=27% Similarity=0.282 Sum_probs=26.9
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|+++||+.
T Consensus 91 ~l~~~~kPvIAaVnG~a~GgG~~LaLacD~r 121 (699)
T TIGR02440 91 ELEALPIPVVAAIHGACLGGGLELALACHSR 121 (699)
T ss_pred HHHhCCCCEEEEECCEeecHHHHHHHhCCEE
Confidence 344899999999 999999999999999973
No 106
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=98.50 E-value=5.6e-07 Score=86.10 Aligned_cols=41 Identities=24% Similarity=0.317 Sum_probs=36.8
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceE
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWF 208 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f 208 (220)
+.++...+||||+.++|.|.+||..++++||.++|++.+.+
T Consensus 371 i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~ 411 (584)
T TIGR00705 371 LARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTIT 411 (584)
T ss_pred HHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCee
Confidence 44455678999999999999999999999999999999877
No 107
>KOG1679|consensus
Probab=98.48 E-value=1.1e-07 Score=79.30 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=31.7
Q ss_pred hhhHHHHhhhccccccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 101 EDIGECFDSLSENEECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 101 ~~i~~~~~~~~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
+.++..+..+. +.+.|+|++ +|.+.|||++|+.+||+..
T Consensus 111 ~~lR~~~~dIe---~Lp~P~IAAidG~ALGGGLElALACDiRv 150 (291)
T KOG1679|consen 111 NGLRGLFNDIE---RLPQPVIAAIDGAALGGGLELALACDIRV 150 (291)
T ss_pred HHHHHHHHHHH---hCCccceehhcchhcccchhhhhhcccee
Confidence 34455555555 899999999 9999999999999999754
No 108
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=98.43 E-value=1.7e-07 Score=76.68 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=25.5
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
.+++|+|+. +|.+.|+|+.+..+||..-
T Consensus 91 ~~~~p~Ia~v~G~a~g~G~~la~~~D~~i 119 (195)
T cd06558 91 RLPKPVIAAVNGAALGGGLELALACDIRI 119 (195)
T ss_pred cCCCCEEEEECCeeecHHHHHHHhCCEEE
Confidence 789999999 9999999999999999643
No 109
>KOG1682|consensus
Probab=98.14 E-value=1.3e-06 Score=72.46 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=26.5
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
-+++.++|||+. +|.+..+|+.|...||..
T Consensus 120 ~Irn~pVPVia~VNG~AaAAGcQLVaSCD~v 150 (287)
T KOG1682|consen 120 DIRNLPVPVIAKVNGYAAAAGCQLVASCDMV 150 (287)
T ss_pred HHhcCCCceEEEecchhhhccceEEEeeeEE
Confidence 344899999999 999999999999999864
No 110
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.45 E-value=0.0013 Score=57.50 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=36.7
Q ss_pred HhhhcCCCcEEEeecCc--cccchhhhhhhccEEEEeCCceEeccc
Q psy8151 169 SSLERCPKPVISAVHGA--CIGGGMSLITAADIRYATKDAWFTLKE 212 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~--a~GgG~~lal~cD~rva~~~a~f~~pe 212 (220)
..+... +|+|++|-|. |.||+..++..||++||++++++++..
T Consensus 131 ~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aG 175 (274)
T TIGR03133 131 LDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSG 175 (274)
T ss_pred HHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccC
Confidence 334444 9999999999 899999999999999999999887743
No 111
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.35 E-value=0.001 Score=58.71 Aligned_cols=43 Identities=21% Similarity=0.345 Sum_probs=37.0
Q ss_pred HhhhcCCCcEEEeecCc--cccchhhhhhhccEEEEeCCceEeccc
Q psy8151 169 SSLERCPKPVISAVHGA--CIGGGMSLITAADIRYATKDAWFTLKE 212 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~--a~GgG~~lal~cD~rva~~~a~f~~pe 212 (220)
..++.. +|+|++|-|. |+||+...+.+||++||++++++++..
T Consensus 140 ~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~iglaG 184 (301)
T PRK07189 140 VDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLSG 184 (301)
T ss_pred HHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEeccC
Confidence 334444 9999999999 999999999999999999999888754
No 112
>KOG1683|consensus
Probab=97.27 E-value=0.00011 Score=66.07 Aligned_cols=121 Identities=13% Similarity=0.084 Sum_probs=92.1
Q ss_pred ceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-CceecCCCcc
Q psy8151 10 KTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-KIFTAGLDLS 88 (220)
Q Consensus 10 ~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-~~FsaG~Dl~ 88 (220)
.+++-..+..++..+.++ |+. |..| .++..+|...|+++..+.-+++...++.. ..|++|.|..
T Consensus 56 ~~L~~~~Dy~~~~~~dmv-iea-v~ed-------------l~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~ 120 (380)
T KOG1683|consen 56 SNLVETLDYTGFANADMV-IEA-VFED-------------LELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRP 120 (380)
T ss_pred hhccccccccccccccee-ccc-hhhh-------------HHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCch
Confidence 334333334477788887 654 8888 99999999999999999877888888776 6777776665
Q ss_pred cccccchhhhhhhhhHHHHhhhccccccceEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy8151 89 GMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSI 168 (220)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (220)
++- -..+ ......+-++++++
T Consensus 121 e~v-----------------------------------------------vg~h------------~fspa~~m~LlEii 141 (380)
T KOG1683|consen 121 EMV-----------------------------------------------VGMH------------FFSPAHWMQLLEII 141 (380)
T ss_pred hhh-----------------------------------------------cccc------------ccCHHHHHHHHHHH
Confidence 421 1111 11233456788999
Q ss_pred HhhhcCCCcEEEeecCccccch--hhhhhhccEEEEeC
Q psy8151 169 SSLERCPKPVISAVHGACIGGG--MSLITAADIRYATK 204 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG--~~lal~cD~rva~~ 204 (220)
..+.+++.|+.+++||.+-.|+ +-++.+|+||+...
T Consensus 142 ~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~ 179 (380)
T KOG1683|consen 142 LALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRL 179 (380)
T ss_pred HhcCCCchHHHHHHhcccccCCccEEeccCCceEEEec
Confidence 9999999999999999999999 88999999999974
No 113
>KOG0016|consensus
Probab=97.25 E-value=0.00027 Score=60.63 Aligned_cols=34 Identities=6% Similarity=0.058 Sum_probs=28.4
Q ss_pred HHHhhhccccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 105 ECFDSLSENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 105 ~~~~~~~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.+...+. ..+||+|++ +|++.|-|..+.-+||+-
T Consensus 98 ~~v~~fi---~f~Kplia~vNGPAIGlgasil~lcD~V 132 (266)
T KOG0016|consen 98 CFVNTFI---NFPKPLVALVNGPAIGLGASILPLCDYV 132 (266)
T ss_pred HHHHHHh---cCCCCEEEEecCCccchhhHHhhhhheE
Confidence 3455555 889999999 999999999999999853
No 114
>PRK10949 protease 4; Provisional
Probab=97.21 E-value=0.0035 Score=60.63 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=36.5
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEec
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTL 210 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~ 210 (220)
+.+++...|||||.+.+.|.-||.-++++||.++|.+.+..+-
T Consensus 389 i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGS 431 (618)
T PRK10949 389 LAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGS 431 (618)
T ss_pred HHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceee
Confidence 3445556899999999999999999999999999998766554
No 115
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=97.03 E-value=0.011 Score=52.64 Aligned_cols=136 Identities=13% Similarity=0.003 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHhcccCCc---ceEEEEecCC-----CceecCCCcc----cc---cccchhhhhhhhhHHHHhhhcccc
Q psy8151 50 HTMWLEIGECFDSLSENEE---CRVIILSAAG-----KIFTAGLDLS----GM---LSLGQEIAEQEDIGECFDSLSENE 114 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~---~rvvvl~g~G-----~~FsaG~Dl~----~~---~~~~~~~~~~~~i~~~~~~~~~~~ 114 (220)
.+.+..|.+.+-++..|.. -+. +++|-| ++..-|.|-. +- ......+...++..+..+...
T Consensus 76 ~d~i~~l~d~f~El~gd~~~~dd~a-vV~Glgri~GrpV~VIa~dkg~~~~e~~~~~~G~~~p~g~rKa~Rlm~lA~--- 151 (322)
T CHL00198 76 LDYIPYILDEWIELHGDRGGSDDPA-LVGGIGKINGRTIVFLGHQRGRNTKENVLRNFGMPSPGGYRKALRLMKHAN--- 151 (322)
T ss_pred HHHHHHHhHHHHHHccccccCCCCc-eEEEEEEECCEEEEEEEecCCccchhhhhhcCCCCCHHHHHHHHHHHHHHH---
Confidence 6666666666666665531 122 224432 3334444431 10 111123334466666666666
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEeecCccccchhhh
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSL 193 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~l 193 (220)
+...|||+- +. .|+.+.... + .+-....+.+.+..+.+..+|+|++|-|.|.|||.-.
T Consensus 152 ~f~lPIItlvDT----pGA~~G~~A-------E----------~~G~~~aiar~l~~~a~~~VP~IsVViGeggsGGAla 210 (322)
T CHL00198 152 KFGLPILTFIDT----PGAWAGVKA-------E----------KLGQGEAIAVNLREMFSFEVPIICTIIGEGGSGGALG 210 (322)
T ss_pred HcCCCEEEEEeC----CCcCcCHHH-------H----------HHhHHHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHh
Confidence 677888876 43 222221100 0 0011233444555667889999999999998888655
Q ss_pred hhhccEEEEeCCceEec
Q psy8151 194 ITAADIRYATKDAWFTL 210 (220)
Q Consensus 194 al~cD~rva~~~a~f~~ 210 (220)
...||+++|.++++++.
T Consensus 211 l~~aD~V~m~e~a~~sV 227 (322)
T CHL00198 211 IGIGDSIMMLEYAVYTV 227 (322)
T ss_pred hhcCCeEEEeCCeEEEe
Confidence 55699999999999875
No 116
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=96.89 E-value=0.0068 Score=53.92 Aligned_cols=49 Identities=20% Similarity=0.276 Sum_probs=39.3
Q ss_pred HHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEec
Q psy8151 162 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTL 210 (220)
Q Consensus 162 ~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~ 210 (220)
..+.+.+..+.+..+|+|++|-|.|.|||......||++++.+++.++.
T Consensus 176 ~aia~~l~a~s~~~VP~IsVViGeggsGGAla~~~aD~v~m~~~a~~sV 224 (316)
T TIGR00513 176 EAIARNLREMARLGVPVICTVIGEGGSGGALAIGVGDKVNMLEYSTYSV 224 (316)
T ss_pred HHHHHHHHHHHcCCCCEEEEEecccccHHHhhhccCCEEEEecCceEEe
Confidence 3345556667788999999999999777765445699999999998875
No 117
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=96.86 E-value=0.0024 Score=55.51 Aligned_cols=53 Identities=21% Similarity=0.199 Sum_probs=47.4
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceecccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGKWK 219 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~Gl~p 219 (220)
+...|.+.+.++++.|+.+|+.+|.-+|++||-.+|.+.+.+|--+..+|-.|
T Consensus 110 I~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~p 162 (285)
T PF01972_consen 110 IARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYP 162 (285)
T ss_pred HHHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCC
Confidence 34556678999999999999999999999999999999999999888888766
No 118
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=96.78 E-value=0.0095 Score=51.60 Aligned_cols=88 Identities=13% Similarity=0.115 Sum_probs=59.9
Q ss_pred hhhhhHHHHhhhccccccceEEEEe-cCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q psy8151 99 EQEDIGECFDSLSENEECRVIVLSA-AGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKP 177 (220)
Q Consensus 99 ~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp 177 (220)
..+++.+..+... +...|||.- +. .|+.+..... ..-....+.+.+..+...++|
T Consensus 83 g~rKa~R~~~lA~---~~~lPvV~lvDt----pGa~~g~~aE-----------------~~G~~~~ia~~~~~~s~~~VP 138 (256)
T PRK12319 83 GYRKALRLMKQAE---KFGRPVVTFINT----AGAYPGVGAE-----------------ERGQGEAIARNLMEMSDLKVP 138 (256)
T ss_pred HHHHHHHHHHHHH---HcCCCEEEEEEC----CCcCCCHhHH-----------------hccHHHHHHHHHHHHhCCCCC
Confidence 4456666666666 777888876 43 2322211000 011223455566777888999
Q ss_pred EEEeecCccccchhhhhhhccEEEEeCCceEec
Q psy8151 178 VISAVHGACIGGGMSLITAADIRYATKDAWFTL 210 (220)
Q Consensus 178 ~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~ 210 (220)
+|++|-|.|.|||......||+++|.+++.++.
T Consensus 139 ~IsVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v 171 (256)
T PRK12319 139 IIAIIIGEGGSGGALALAVADQVWMLENTMYAV 171 (256)
T ss_pred EEEEEeCCcCcHHHHHhhcCCEEEEecCceEEE
Confidence 999999999999888778999999999998875
No 119
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=96.76 E-value=0.024 Score=52.11 Aligned_cols=48 Identities=17% Similarity=0.211 Sum_probs=38.1
Q ss_pred HHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEec
Q psy8151 163 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTL 210 (220)
Q Consensus 163 ~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~ 210 (220)
.+.+.+..+....+|+|++|-|.+.+||.....+||+++|.++++++.
T Consensus 247 aIAr~l~ams~l~VPiISVViGeGgSGGAlalg~aD~VlMle~A~ysV 294 (431)
T PLN03230 247 AIAFNLREMFGLRVPIIATVIGEGGSGGALAIGCGNRMLMMENAVYYV 294 (431)
T ss_pred HHHHHHHHHhcCCCCEEEEEeCCCCcHHHHHhhcCCEEEEecCCEEEe
Confidence 345556677889999999999999666654445689999999998775
No 120
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=96.64 E-value=0.026 Score=55.09 Aligned_cols=49 Identities=20% Similarity=0.255 Sum_probs=40.4
Q ss_pred HHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEec
Q psy8151 162 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTL 210 (220)
Q Consensus 162 ~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~ 210 (220)
..+.+.+..+....+|+|++|-|.|.|||.-....||+++|.++++++.
T Consensus 267 ~aIArnl~amasl~VP~ISVViGeggSGGAlA~g~aD~VlMle~A~~sV 315 (762)
T PLN03229 267 EAIAHNLRTMFGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVFYV 315 (762)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhcCCEEEEecCCeEEe
Confidence 3345556677789999999999999888877777799999999998775
No 121
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.59 E-value=0.01 Score=52.87 Aligned_cols=48 Identities=27% Similarity=0.260 Sum_probs=38.3
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccceec
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 216 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~~~G 216 (220)
+.++..-. ||++.++++|.-||.-++++||.+||++.+..|--.+..+
T Consensus 122 l~~l~~~~-PV~v~v~~~AASGGY~IA~aAd~I~a~p~si~GSIGVi~~ 169 (317)
T COG0616 122 LKRLRAKK-PVVVSVGGYAASGGYYIALAADKIVADPSSITGSIGVISG 169 (317)
T ss_pred HHHHhhcC-CEEEEECCeecchhhhhhccCCEEEecCCceeeeceeEEe
Confidence 34444434 9999999999999999999999999999988775444433
No 122
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=96.58 E-value=0.03 Score=49.96 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=39.9
Q ss_pred HHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEec
Q psy8151 162 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTL 210 (220)
Q Consensus 162 ~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~ 210 (220)
..+.+.+..+.+..+|+|++|-|.|.|||......||+++|.+++.++.
T Consensus 176 ~aia~~l~~~a~~~VP~IsVIiGeg~sGGAla~~~aD~v~m~~~A~~sv 224 (319)
T PRK05724 176 EAIARNLREMARLKVPIICTVIGEGGSGGALAIGVGDRVLMLEYSTYSV 224 (319)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCccHHHHHHHhccCeeeeecCceEee
Confidence 3445566777889999999999999888765555699999999999874
No 123
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=96.58 E-value=0.0042 Score=50.68 Aligned_cols=47 Identities=11% Similarity=0.096 Sum_probs=41.5
Q ss_pred HHhhhcCCCcEEEeec---CccccchhhhhhhccEEEEeCCceEecccce
Q psy8151 168 ISSLERCPKPVISAVH---GACIGGGMSLITAADIRYATKDAWFTLKEVD 214 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~---G~a~GgG~~lal~cD~rva~~~a~f~~pe~~ 214 (220)
+..|...++||++.|+ |.|..+|.-++++||.+++.+++.++.-..-
T Consensus 51 ~~~i~~~~~pvv~~v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi 100 (172)
T cd07015 51 VQRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPI 100 (172)
T ss_pred HHHHHhcCcCEEEEEecCCCeehhHHHHHHHhcCceEECCCCEEEEcccc
Confidence 4455667999999999 9999999999999999999999999876653
No 124
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=96.55 E-value=0.021 Score=53.85 Aligned_cols=44 Identities=36% Similarity=0.505 Sum_probs=37.2
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCC-ceEeccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKE 212 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~-a~f~~pe 212 (220)
..++.. .+|+|+++.|.|.|||..++..||++|++++ +.+.+..
T Consensus 125 ~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~G 169 (493)
T PF01039_consen 125 IARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLAG 169 (493)
T ss_dssp HHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESST
T ss_pred HHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEEecc
Confidence 344555 9999999999999999999999999999998 8888743
No 125
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=96.29 E-value=0.024 Score=49.98 Aligned_cols=41 Identities=20% Similarity=0.129 Sum_probs=34.5
Q ss_pred cCCCcEEEeecCccccchhhh-hhhccEEEEeCCceEecccc
Q psy8151 173 RCPKPVISAVHGACIGGGMSL-ITAADIRYATKDAWFTLKEV 213 (220)
Q Consensus 173 ~~~kp~Iaav~G~a~GgG~~l-al~cD~rva~~~a~f~~pe~ 213 (220)
...+|.|+++-|+|.||+... ++.||++|+.++|.+++...
T Consensus 205 ~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGP 246 (296)
T CHL00174 205 NKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGK 246 (296)
T ss_pred cCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCH
Confidence 457999999999999999776 56699999988998877543
No 126
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=96.27 E-value=0.022 Score=45.73 Aligned_cols=45 Identities=13% Similarity=0.260 Sum_probs=37.7
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhcc--EEEEeCCceEeccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKE 212 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD--~rva~~~a~f~~pe 212 (220)
+..|...++|+++.+.|.|.++|.-++++|| .|++.++++|.+..
T Consensus 51 ~~~i~~~~~~v~~~~~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~ 97 (162)
T cd07013 51 YDTIKFIKADVVTIIDGLAASMGSVIAMAGAKGKRFILPNAMMMIHQ 97 (162)
T ss_pred HHHHHhcCCCceEEEEeehhhHHHHHHHcCCCCcEEEecCEEEEEcc
Confidence 4455567889999999999999999999999 68888888887543
No 127
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=96.00 E-value=0.056 Score=47.55 Aligned_cols=46 Identities=17% Similarity=0.252 Sum_probs=37.5
Q ss_pred HHhhhcCCCcEEEeecCccccchhh-hhhhccEEEEeCCceEecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMS-LITAADIRYATKDAWFTLKEV 213 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~-lal~cD~rva~~~a~f~~pe~ 213 (220)
+.++....+|.|+++-|.|.||+.. +++.+|++||.++|.+++...
T Consensus 186 ~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGp 232 (285)
T TIGR00515 186 LAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGP 232 (285)
T ss_pred HHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCH
Confidence 4455667899999999999999655 567999999999998887543
No 128
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=95.76 E-value=0.083 Score=42.88 Aligned_cols=50 Identities=22% Similarity=0.403 Sum_probs=40.6
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccE--EEEeCCceEecccceec
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIG 216 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~--rva~~~a~f~~pe~~~G 216 (220)
++..|..++.|+++.+.|.|.+.|.-++++|+. |++.+++.|.+-+...+
T Consensus 66 i~~~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~ 117 (182)
T PF00574_consen 66 IYDAIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTG 117 (182)
T ss_dssp HHHHHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEE
T ss_pred HHHHHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceee
Confidence 355566789999999999999999999999999 89999999988766544
No 129
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=95.75 E-value=0.22 Score=44.04 Aligned_cols=45 Identities=22% Similarity=0.279 Sum_probs=36.7
Q ss_pred HHhhhcCCCcEEEeecCccccchhh-hhhhccEEEEeCCceEeccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMS-LITAADIRYATKDAWFTLKE 212 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~-lal~cD~rva~~~a~f~~pe 212 (220)
+.++....+|.|+++-|.|.||+.. +++.+|++||.++|.+++-.
T Consensus 187 ~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aG 232 (292)
T PRK05654 187 LKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAG 232 (292)
T ss_pred HHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecC
Confidence 4445667899999999999999755 56779999999999887654
No 130
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=95.44 E-value=0.061 Score=51.64 Aligned_cols=41 Identities=27% Similarity=0.366 Sum_probs=35.0
Q ss_pred hhcCCCcEEEeecCccccchhhhhhhccEEEEeCC-ceEecc
Q psy8151 171 LERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLK 211 (220)
Q Consensus 171 l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~-a~f~~p 211 (220)
+....+|.|++|-|.|.|||.....+||++|++++ +.+.+.
T Consensus 201 ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~a 242 (569)
T PLN02820 201 MSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLA 242 (569)
T ss_pred HhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEec
Confidence 45567999999999999999999999999999864 666654
No 131
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=95.39 E-value=0.054 Score=43.82 Aligned_cols=49 Identities=20% Similarity=0.275 Sum_probs=41.0
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhcc--EEEEeCCceEecccceec
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIG 216 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD--~rva~~~a~f~~pe~~~G 216 (220)
+..|...+.|+++.+.|.|.++|.-+++++| -|++.++++|.+-+...+
T Consensus 60 ~~~l~~~~~~v~t~~~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~ 110 (171)
T cd07017 60 YDTMQYIKPPVSTICLGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGG 110 (171)
T ss_pred HHHHHhcCCCEEEEEEeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCcc
Confidence 3345556899999999999999999999999 799999999887665443
No 132
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=95.23 E-value=0.051 Score=51.55 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=32.8
Q ss_pred cCCCcEEEeecCccccchhhhhhhccEEEEeCC-ceEecc
Q psy8151 173 RCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLK 211 (220)
Q Consensus 173 ~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~-a~f~~p 211 (220)
+-.+|.|++|-|.|.||+......||++|++++ +.+.+.
T Consensus 152 s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~a 191 (512)
T TIGR01117 152 SGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFIT 191 (512)
T ss_pred cCCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEec
Confidence 345899999999999999888789999999986 455553
No 133
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=94.90 E-value=0.55 Score=40.27 Aligned_cols=45 Identities=24% Similarity=0.244 Sum_probs=35.3
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhh-hhhhccEEEEeCCceEec
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMS-LITAADIRYATKDAWFTL 210 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~-lal~cD~rva~~~a~f~~ 210 (220)
..+....+.+.|+|+.|-|.++|||+. +.+.+|.++|.+++.++.
T Consensus 98 ~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A~i~v 143 (238)
T TIGR03134 98 KALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGAMVHV 143 (238)
T ss_pred HHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCcEEEe
Confidence 445556677799999999999988864 444589999999988774
No 134
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=94.69 E-value=0.016 Score=49.68 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=29.5
Q ss_pred HhhhccccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 107 FDSLSENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 107 ~~~~~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.+.+.++..++||||+. +|.++|+|++|.+.||+.
T Consensus 88 ~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~r 123 (257)
T COG1024 88 QDLLRALADLPKPVIAAVNGYALGGGLELALACDIR 123 (257)
T ss_pred HHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeE
Confidence 33444555999999999 999999999999999964
No 135
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=94.47 E-value=0.14 Score=42.86 Aligned_cols=46 Identities=17% Similarity=0.281 Sum_probs=39.4
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhcc--EEEEeCCceEecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEV 213 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD--~rva~~~a~f~~pe~ 213 (220)
+..|...+.|+++.+.|.|.+.|.-++++|| .|++.+++.|.+-..
T Consensus 86 ~d~i~~~~~~v~t~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p 133 (207)
T PRK12553 86 YDTIQFIRPDVQTVCTGQAASAGAVLLAAGTPGKRFALPNARILIHQP 133 (207)
T ss_pred HHHHHhcCCCcEEEEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCc
Confidence 4455667889999999999999999999999 599999999887554
No 136
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=94.29 E-value=0.68 Score=44.04 Aligned_cols=51 Identities=20% Similarity=0.237 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhhcCCCcEEEeecCccccchhhhhh----hccEEEEeCCceEecc
Q psy8151 161 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLK 211 (220)
Q Consensus 161 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal----~cD~rva~~~a~f~~p 211 (220)
+....+++..+....+|.|+.|-|.|.|||..-.. .+|+++|.++++++.-
T Consensus 374 ~~~~a~~~~a~~~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~v~ 428 (512)
T TIGR01117 374 IRHGAKVLYAYSEATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIAVM 428 (512)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEeec
Confidence 34455667778888999999999999888754333 2899999999998753
No 137
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=94.10 E-value=0.022 Score=49.04 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|+.+||+.
T Consensus 87 ~l~~~~kPvIaav~G~a~GgG~~lalacD~~ 117 (255)
T PRK08150 87 KIQYGRVPVIAALHGAVVGGGLELASAAHIR 117 (255)
T ss_pred HHHhCCCCEEEEECCEEEcHHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 138
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=94.09 E-value=0.28 Score=47.31 Aligned_cols=44 Identities=20% Similarity=0.143 Sum_probs=34.8
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLK 211 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~p 211 (220)
.+..+....|||||..++++ -+|.-++.+||-+++.+...+++.
T Consensus 118 ai~~fk~sgKpVvA~~~~~~-s~~YylAs~AD~I~~~p~G~v~~~ 161 (584)
T TIGR00705 118 ALSEFKDSGKPVYAYGTNYS-QGQYYLASFADEIILNPMGSVDLH 161 (584)
T ss_pred HHHHHHhcCCeEEEEEcccc-chhhhhhhhCCEEEECCCceEEee
Confidence 34445567899999988876 678889999999999987766543
No 139
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=94.04 E-value=0.027 Score=48.46 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 95 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ 125 (256)
T PRK06143 95 AVRHFPVPVIARIPGWCLGGGLELAAACDLR 125 (256)
T ss_pred HHHhCCCCEEEEECCEEeehhHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 140
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=93.80 E-value=0.025 Score=49.82 Aligned_cols=31 Identities=10% Similarity=-0.026 Sum_probs=27.3
Q ss_pred ccccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 111 SENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 111 ~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.++..++||+|+. +|.|+|+|++|.++||+.
T Consensus 121 ~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ 152 (302)
T PRK08272 121 MSLWHAHKPTVAKVHGYCVAGGTDIALHCDQV 152 (302)
T ss_pred HHHHhCCCCEEEEEccEeehhhHHHHHhCCEE
Confidence 3444899999999 999999999999999974
No 141
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=93.77 E-value=0.036 Score=48.00 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|+.+||+.
T Consensus 101 ~l~~~~kPvIAav~G~a~GgG~~lalacD~r 131 (268)
T PRK07327 101 NVINCDKPIVSAIHGPAVGAGLVAALLADIS 131 (268)
T ss_pred HHHcCCCCEEEEEcCeeeehhhHHHHhCCEE
Confidence 344899999999 999999999999999964
No 142
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=93.73 E-value=0.03 Score=48.18 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|||+. +|.++|+|++|..+||+.
T Consensus 90 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ 120 (258)
T PRK09076 90 ALSAFRGVSIAAINGYAMGGGLECALACDIR 120 (258)
T ss_pred HHHhCCCCEEEEECCEEecHHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 143
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=93.72 E-value=0.45 Score=44.11 Aligned_cols=50 Identities=16% Similarity=0.243 Sum_probs=41.8
Q ss_pred HHHHHHHhhhcCCCcEEEeec---CccccchhhhhhhccEEEEeCCceEeccc
Q psy8151 163 TYQKSISSLERCPKPVISAVH---GACIGGGMSLITAADIRYATKDAWFTLKE 212 (220)
Q Consensus 163 ~~~~~~~~l~~~~kp~Iaav~---G~a~GgG~~lal~cD~rva~~~a~f~~pe 212 (220)
.+.++++++.+.|+|++..|. ++|.-+|.-++++||+..|++.+.++-..
T Consensus 73 sm~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~ 125 (436)
T COG1030 73 SMRQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAAT 125 (436)
T ss_pred HHHHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccc
Confidence 456678889999999777764 36999999999999999999998887543
No 144
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=93.65 E-value=0.11 Score=43.22 Aligned_cols=45 Identities=16% Similarity=0.236 Sum_probs=35.2
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhc--cEEEEeCCceEeccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAA--DIRYATKDAWFTLKE 212 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~c--D~rva~~~a~f~~pe 212 (220)
+..|...+.|+++.+.|.|.+.|..+++++ +.|++.++++|.+-.
T Consensus 82 ~d~i~~~~~~v~t~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~ 128 (200)
T PRK00277 82 YDTMQFIKPDVSTICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQ 128 (200)
T ss_pred HHHHHhcCCCEEEEEEeEeccHHHHHHhcCCCCCEEEcCCceEEecc
Confidence 344556678999999999999999998875 368888888777644
No 145
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=93.63 E-value=0.033 Score=47.68 Aligned_cols=30 Identities=30% Similarity=0.406 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..++||+|+. +|.++|+|++|...||+.
T Consensus 89 ~i~~~~kPvIAav~G~a~GgG~~Lal~cD~r 119 (249)
T PRK07938 89 AVYECAVPVIAAVHGFCLGGGIGLVGNADVI 119 (249)
T ss_pred HHHhCCCCEEEEEcCEEeehHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 146
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=93.62 E-value=0.04 Score=47.43 Aligned_cols=30 Identities=17% Similarity=0.381 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 94 ~l~~~~kPvIaav~G~a~GgG~~lalacD~r 124 (262)
T PRK05995 94 AIYRCPKPVIARVHGDAYAGGMGLVAACDIA 124 (262)
T ss_pred HHHcCCCCEEEEECCEEEhhHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 147
>PRK11778 putative inner membrane peptidase; Provisional
Probab=93.57 E-value=0.16 Score=45.56 Aligned_cols=45 Identities=24% Similarity=0.187 Sum_probs=38.8
Q ss_pred HhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecccc
Q psy8151 169 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 213 (220)
Q Consensus 169 ~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~pe~ 213 (220)
.+++...||+++.+++.|.-||.-++++||-++|.+.+.++.-.+
T Consensus 148 ~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGV 192 (330)
T PRK11778 148 QRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGV 192 (330)
T ss_pred HHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeee
Confidence 345567899999999999999999999999999999888776544
No 148
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=93.51 E-value=0.041 Score=47.36 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|.++||+.
T Consensus 96 ~l~~~~kPvIaav~G~a~GgG~~lalacD~r 126 (260)
T PRK07827 96 AIVELPKPVIAAIDGHVRAGGFGLVGACDIV 126 (260)
T ss_pred HHHhCCCCEEEEEcCeeecchhhHHHhCCEE
Confidence 444899999999 999999999999999964
No 149
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=93.35 E-value=0.048 Score=47.12 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=26.7
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 96 ~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ 126 (265)
T PRK05674 96 NLYRLKIPTLAVVQGAAFGGALGLISCCDMA 126 (265)
T ss_pred HHHcCCCCEEEEEcCEEEechhhHhhhcCEE
Confidence 344899999999 999999999999999964
No 150
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=93.33 E-value=0.037 Score=48.08 Aligned_cols=30 Identities=27% Similarity=0.475 Sum_probs=27.0
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|.++||+.
T Consensus 106 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ 136 (275)
T PLN02664 106 AIEQCRKPVIAAIHGACIGGGVDIVTACDIR 136 (275)
T ss_pred HHHhCCCCEEEEECCccccchHHHHHhCCEE
Confidence 445899999999 999999999999999964
No 151
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=93.28 E-value=0.048 Score=46.70 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=26.4
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 93 l~~~~kPvIAav~G~a~GgG~~la~acD~r 122 (251)
T PRK06023 93 LAEAEKPIVSGVDGLAIGIGTTIHLHCDLT 122 (251)
T ss_pred HHhCCCCEEEEeCCceecHHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 152
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=93.26 E-value=0.03 Score=49.35 Aligned_cols=30 Identities=10% Similarity=-0.076 Sum_probs=26.9
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
+..++||||+. +|.|+|+|++|+++||+.-
T Consensus 108 l~~~~kPvIAaV~G~a~GgG~~LalacD~ri 138 (298)
T PRK12478 108 IWRASKPVIAQVHGWCVGGASDYALCADIVI 138 (298)
T ss_pred HHhCCCCEEEEEccEEehhHHHHHHHCCEEE
Confidence 44899999999 9999999999999999743
No 153
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=93.25 E-value=0.04 Score=47.28 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=26.7
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 84 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ 114 (251)
T TIGR03189 84 AMLDSPVPILVAVRGQCLGGGLEVAAAGNLM 114 (251)
T ss_pred HHHhCCCCEEEEecCeeeeHHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 154
>PRK08139 enoyl-CoA hydratase; Validated
Probab=93.25 E-value=0.031 Score=48.33 Aligned_cols=30 Identities=20% Similarity=0.122 Sum_probs=26.9
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 99 ~l~~~~kPvIAav~G~a~GgG~~lalacD~r 129 (266)
T PRK08139 99 AIVALPQPVIARVHGIATAAGCQLVASCDLA 129 (266)
T ss_pred HHHhCCCCEEEEECceeeHHHHHHHHhCCEE
Confidence 444899999999 999999999999999964
No 155
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=93.24 E-value=0.043 Score=46.92 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+...+++|+|+. +|.++|+|++|..+||+.
T Consensus 90 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~r 120 (249)
T PRK05870 90 AVASCPLPTIAAVNGAAVGAGLNLALAADVR 120 (249)
T ss_pred HHHhCCCCEEEEECCEeEchhHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 156
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=93.24 E-value=0.048 Score=47.00 Aligned_cols=29 Identities=31% Similarity=0.344 Sum_probs=26.2
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
...+++|+|+. +|.|+|+|++|..+||+.
T Consensus 99 l~~~~kpvIaav~G~a~GgG~~lalacD~r 128 (266)
T PRK09245 99 LYNLEVPVIAAVNGPAIGAGCDLACMCDIR 128 (266)
T ss_pred HHcCCCCEEEEECCEeecHHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 157
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=93.20 E-value=0.044 Score=47.13 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=26.7
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..++||+|+. +|.++|+|++|..+||+.
T Consensus 95 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~r 125 (260)
T PRK05980 95 RLEAFPKPVIAAVNGLAFGGGCEITEAVHLA 125 (260)
T ss_pred HHHhCCCCEEEEEcCEEEhhhhHHhHhCCEE
Confidence 344899999999 999999999999999964
No 158
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=93.17 E-value=0.036 Score=47.24 Aligned_cols=31 Identities=16% Similarity=0.086 Sum_probs=27.3
Q ss_pred ccccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 111 SENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 111 ~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.++..+++|+|+. +|.++|+|++|+++||+.
T Consensus 88 ~~l~~~~kPvIAaV~G~a~GgG~~lalacD~r 119 (239)
T PLN02267 88 ADLISLPMPTIAAVTGHASAAGFILALSHDYV 119 (239)
T ss_pred HHHhcCCCCEEEEECCcchHHHHHHHHHCCEE
Confidence 3444899999999 999999999999999964
No 159
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=93.16 E-value=0.053 Score=46.62 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|.++||+.
T Consensus 92 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ 122 (260)
T PRK07657 92 MVEQLPQPVIAAINGIALGGGLELALACDFR 122 (260)
T ss_pred HHHhCCCCEEEEEcCEeechHHHHHHhCCEE
Confidence 334899999999 999999999999999964
No 160
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=93.15 E-value=0.056 Score=46.60 Aligned_cols=29 Identities=28% Similarity=0.351 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 98 l~~~~kPvIaav~G~a~GgG~~lala~D~~ 127 (262)
T PRK06144 98 LEQLRVPTIAAIAGACVGGGAAIAAACDLR 127 (262)
T ss_pred HHhCCCCEEEEECCeeeehHHHHHHhCCEE
Confidence 33889999999 999999999999999974
No 161
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=93.14 E-value=0.05 Score=46.94 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=26.1
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|.++||+.
T Consensus 92 i~~~~kPvIaav~G~a~GgG~~lalacD~~ 121 (261)
T PRK11423 92 IQKFPKPVIAMVEGSVWGGAFELIMSCDLI 121 (261)
T ss_pred HHhCCCCEEEEEecEEechHHHHHHhCCEE
Confidence 33899999999 999999999999999964
No 162
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=93.09 E-value=0.057 Score=46.97 Aligned_cols=30 Identities=13% Similarity=0.066 Sum_probs=26.7
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|||+. +|.++|+|++|.++||+.
T Consensus 99 ~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ 129 (275)
T PRK09120 99 RLRWYQKPTIAMVNGWCFGGGFSPLVACDLA 129 (275)
T ss_pred HHHhCCCCEEEEEcCEEechhHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 163
>PRK05869 enoyl-CoA hydratase; Validated
Probab=93.05 E-value=0.052 Score=45.76 Aligned_cols=31 Identities=19% Similarity=0.122 Sum_probs=27.2
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
++..+++|+|+. +|.++|+|++|.++||+.-
T Consensus 94 ~i~~~~kPvIAav~G~a~GgG~~lalacD~ri 125 (222)
T PRK05869 94 AVAAIPKPTVAAITGYALGAGLTLALAADWRV 125 (222)
T ss_pred HHHhCCCCEEEEEcCEeecHHHHHHHhCCEEE
Confidence 344899999999 9999999999999999743
No 164
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=93.03 E-value=0.051 Score=46.87 Aligned_cols=30 Identities=17% Similarity=0.142 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 98 ~l~~~~kpvIaav~G~a~GgG~~lalacD~~ 128 (266)
T PRK05981 98 RLRNLPCPIVTAVNGPAAGVGMSFALMGDLI 128 (266)
T ss_pred HHHhCCCCEEEEECCEeehHHHHHHHhCCEE
Confidence 334899999999 999999999999999964
No 165
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=93.02 E-value=0.054 Score=46.55 Aligned_cols=30 Identities=30% Similarity=0.399 Sum_probs=26.9
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 92 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ 122 (257)
T PRK06495 92 AIRECAKPVIAAVNGPALGAGLGLVASCDII 122 (257)
T ss_pred HHHhCCCCEEEEECCeeehhHHHHHHhCCEE
Confidence 344899999999 999999999999999974
No 166
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=92.98 E-value=0.052 Score=47.18 Aligned_cols=30 Identities=23% Similarity=0.230 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 108 ~l~~~~kPvIAaV~G~a~GgG~~LalacD~r 138 (277)
T PRK08258 108 AMRACPQPIIAAVDGVCAGAGAILAMASDLR 138 (277)
T ss_pred HHHhCCCCEEEEECCeeehHHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 167
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=92.96 E-value=0.055 Score=46.37 Aligned_cols=29 Identities=24% Similarity=0.307 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|...||+.
T Consensus 90 l~~~~kpvIAav~G~a~GgG~~lalacD~r 119 (257)
T PRK07658 90 VEKFSKPVIAAIHGAALGGGLELAMSCHIR 119 (257)
T ss_pred HHhCCCCEEEEEcCeeeeHHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 168
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=92.93 E-value=0.044 Score=47.43 Aligned_cols=30 Identities=27% Similarity=0.447 Sum_probs=26.9
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|.++||+.
T Consensus 104 ~i~~~~kpvIAav~G~a~GgG~~lalacD~~ 134 (272)
T PRK06142 104 AVADCRKPVIAAVQGWCIGGGVDLISACDMR 134 (272)
T ss_pred HHHhCCCCEEEEecCccccchHHHHHhCCEE
Confidence 445899999999 999999999999999964
No 169
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=92.93 E-value=0.039 Score=47.37 Aligned_cols=30 Identities=27% Similarity=0.300 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|.++||+.
T Consensus 89 ~l~~~~kpvIaav~G~a~GgG~~lalacD~~ 119 (257)
T PRK05862 89 KVARIRKPVIAAVAGYALGGGCELAMMCDII 119 (257)
T ss_pred HHHhCCCCEEEEEccEEeHHHHHHHHHCCEE
Confidence 344899999999 999999999999999964
No 170
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=92.91 E-value=0.057 Score=46.52 Aligned_cols=30 Identities=13% Similarity=0.288 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..++||+|+. +|.++|+|++|..+||+.
T Consensus 95 ~l~~~~kPvIaav~G~a~GgG~~lala~D~r 125 (262)
T PRK07468 95 ALNDLPKPLIGRIQGQAFGGGVGLISVCDVA 125 (262)
T ss_pred HHHcCCCCEEEEECCEEEhHHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 171
>PLN02600 enoyl-CoA hydratase
Probab=92.88 E-value=0.059 Score=46.19 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|...||+.
T Consensus 84 l~~~~kPvIAav~G~a~GgG~~lala~D~~ 113 (251)
T PLN02600 84 LEALSIPTIAVVEGAALGGGLELALSCDLR 113 (251)
T ss_pred HHhCCCCEEEEecCeecchhHHHHHhCCEE
Confidence 34889999999 999999999999999964
No 172
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=92.87 E-value=0.055 Score=46.50 Aligned_cols=29 Identities=17% Similarity=0.148 Sum_probs=26.1
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 90 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ 119 (256)
T TIGR03210 90 IRDVPKPVIARVQGYAIGGGNVLVTICDLT 119 (256)
T ss_pred HHhCCCCEEEEECCEEehhhHHHHHhCCEE
Confidence 33889999999 999999999999999964
No 173
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=92.81 E-value=0.059 Score=46.84 Aligned_cols=30 Identities=20% Similarity=0.183 Sum_probs=26.7
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 104 ~l~~~~kPvIaav~G~a~GgG~~LalacD~r 134 (276)
T PRK05864 104 ALRRLHQPVIAAVNGPAIGGGLCLALAADIR 134 (276)
T ss_pred HHHhCCCCEEEEECCEeehhHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 174
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=92.80 E-value=0.059 Score=46.51 Aligned_cols=29 Identities=28% Similarity=0.269 Sum_probs=26.2
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 90 i~~~~kPvIAaV~G~a~GgG~~lalacD~~ 119 (258)
T PRK06190 90 WPAMRKPVIGAINGAAVTGGLELALACDIL 119 (258)
T ss_pred HHhCCCCEEEEECCEeecHHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 175
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=92.77 E-value=0.07 Score=45.84 Aligned_cols=29 Identities=10% Similarity=0.204 Sum_probs=26.2
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
...+++|+|+. +|.++|+|++|.+.||+.
T Consensus 92 l~~~~kPvIaav~G~a~GgG~~lala~D~~ 121 (255)
T PRK07112 92 LATGPYVTIAHVRGKVNAGGIGFVAASDIV 121 (255)
T ss_pred HHcCCCCEEEEEecEEEcchhHHHHcCCEE
Confidence 34889999999 999999999999999964
No 176
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=92.76 E-value=0.057 Score=47.46 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=26.7
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|||+. +|.|+|+|++|+++||+.
T Consensus 108 ~l~~~pkPvIAav~G~a~GgG~~LalacD~r 138 (296)
T PRK08260 108 RIFDSLKPVIAAVNGPAVGVGATMTLAMDIR 138 (296)
T ss_pred HHHhCCCCEEEEECCeeehHhHHHHHhCCEE
Confidence 344889999999 999999999999999964
No 177
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=92.70 E-value=0.06 Score=45.95 Aligned_cols=28 Identities=32% Similarity=0.411 Sum_probs=25.7
Q ss_pred cccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 114 EECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 114 ~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
..+++|+|+. +|.++|+|++|.+.||+.
T Consensus 83 ~~~~kP~Iaav~G~a~GgG~~lal~cD~~ 111 (243)
T PRK07854 83 DAAPVPVIAAINGPAIGAGLQLAMACDLR 111 (243)
T ss_pred HhCCCCEEEEecCcccccHHHHHHhCCEE
Confidence 3889999999 999999999999999964
No 178
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=92.64 E-value=0.065 Score=46.12 Aligned_cols=30 Identities=20% Similarity=0.149 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 94 ~l~~~~kPvIaav~G~a~GgG~~lalacD~r 124 (262)
T PRK08140 94 RLRALPLPVIAAVNGVAAGAGANLALACDIV 124 (262)
T ss_pred HHHhCCCCEEEEECCeeehhHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 179
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=92.64 E-value=0.052 Score=47.62 Aligned_cols=31 Identities=16% Similarity=0.136 Sum_probs=27.4
Q ss_pred ccccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 111 SENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 111 ~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.++..+++|+|+. +|.++|+|++|.++||+.
T Consensus 112 ~~l~~~pkPvIAaVnG~a~GgG~~lalacD~r 143 (288)
T PRK08290 112 RRWRDLPKPTIAQVQGACIAGGLMLAWVCDLI 143 (288)
T ss_pred HHHHhCCCCEEEEECCEeeHHHHHHHHhCCEE
Confidence 3445899999999 999999999999999974
No 180
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=92.62 E-value=0.068 Score=46.02 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=26.2
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
...++||+|+. +|.++|+|++|..+||+.
T Consensus 94 l~~~~kPvIaav~G~a~GgG~~lalacD~r 123 (261)
T PRK08138 94 IAQCPKPVIAAVNGYALGGGCELAMHADII 123 (261)
T ss_pred HHhCCCCEEEEEccEEEcHHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 181
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=92.54 E-value=0.058 Score=45.49 Aligned_cols=31 Identities=16% Similarity=-0.024 Sum_probs=27.2
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
++..+++|+|+. +|.++|+|+.|...||+.-
T Consensus 86 ~l~~~~kPvIAav~G~a~GgG~~lal~~D~rv 117 (229)
T PRK06213 86 RLLSHPKPVIVACTGHAIAKGAFLLLSADYRI 117 (229)
T ss_pred HHHcCCCCEEEEEcCeeeHHHHHHHHhCCeee
Confidence 344889999999 9999999999999999743
No 182
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=92.52 E-value=0.045 Score=47.35 Aligned_cols=31 Identities=23% Similarity=0.100 Sum_probs=27.2
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
++..+++|||+. +|.++|+|++|..+||+.-
T Consensus 103 ~l~~~~kPvIaav~G~a~GgG~~lala~D~~i 134 (272)
T PRK06210 103 FLTALRKPVIAAINGACAGIGLTHALMCDVRF 134 (272)
T ss_pred HHHhCCCCEEEEECCeeehHHHHHHHhCCEEE
Confidence 344899999999 9999999999999999743
No 183
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=92.51 E-value=0.063 Score=46.23 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=26.2
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|.++||+.
T Consensus 93 l~~~~kPvIAav~G~a~GgG~~lalacD~~ 122 (259)
T TIGR01929 93 IRTCPKPVIAMVNGYAIGGGHVLHVVCDLT 122 (259)
T ss_pred HHhCCCCEEEEEcCEEehHHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 184
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=92.50 E-value=0.063 Score=46.22 Aligned_cols=30 Identities=17% Similarity=0.076 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|..+||+.
T Consensus 93 ~l~~~~~pvIaav~G~a~GgG~~lalacD~r 123 (260)
T PRK07659 93 TLYTMPKLTISAIHGPAAGLGLSIALTADYV 123 (260)
T ss_pred HHHhCCCCEEEEecCceecHHHHHHHhCCEE
Confidence 444899999999 999999999999999964
No 185
>PRK10949 protease 4; Provisional
Probab=92.44 E-value=0.46 Score=46.20 Aligned_cols=45 Identities=20% Similarity=0.238 Sum_probs=33.3
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEecc
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLK 211 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~p 211 (220)
+.+..+....||+||.-+.+ --++.-+|.+||-+++.+...+++.
T Consensus 136 ~ai~~fk~sGKpVvA~~~~~-~s~~YyLASaAD~I~l~P~G~v~~~ 180 (618)
T PRK10949 136 KALREFRDSGKPVYAVGDSY-SQGQYYLASFANKIYLSPQGVVDLH 180 (618)
T ss_pred HHHHHHHHhCCeEEEEecCc-cchhhhhhhhCCEEEECCCceEEEe
Confidence 33445556789999864444 4678889999999999988766544
No 186
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=92.41 E-value=0.071 Score=45.76 Aligned_cols=29 Identities=21% Similarity=0.126 Sum_probs=26.4
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 89 l~~~~kPvIaav~G~a~GgG~~lala~D~r 118 (256)
T TIGR02280 89 LRALPLPVVCAVNGVAAGAGANLALACDIV 118 (256)
T ss_pred HHhCCCCEEEEECCeeehHHHHHHHhCCEE
Confidence 44899999999 999999999999999964
No 187
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=92.41 E-value=0.075 Score=46.02 Aligned_cols=30 Identities=7% Similarity=0.124 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|||+. +|.++|+|++|..+||+.
T Consensus 101 ~i~~~~kPvIaav~G~a~GgG~~LalacD~~ 131 (269)
T PRK06127 101 ALADYAKPTIACIRGYCIGGGMGIALACDIR 131 (269)
T ss_pred HHHhCCCCEEEEECCEEecHHHHHHHhCCEE
Confidence 344899999999 999999999999999964
No 188
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=92.40 E-value=0.049 Score=46.90 Aligned_cols=29 Identities=21% Similarity=0.203 Sum_probs=26.2
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 90 l~~~~kPvIaav~G~a~GgG~~lalacD~~ 119 (261)
T PRK03580 90 IFDLDKPVIAAVNGYAFGGGFELALAADFI 119 (261)
T ss_pred HHhCCCCEEEEECCeeehHHHHHHHHCCEE
Confidence 34899999999 999999999999999964
No 189
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=92.40 E-value=0.074 Score=45.57 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=25.9
Q ss_pred cccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 114 EECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 114 ~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
..+++|+|+. +|.++|+|++|..+||+.
T Consensus 93 ~~~~kp~Iaav~G~a~GgG~~lal~cD~r 121 (259)
T PRK06688 93 AALPKPVVAAVNGPAVGVGVSLALACDLV 121 (259)
T ss_pred HcCCCCEEEEECCeeecHHHHHHHhCCEE
Confidence 3899999999 999999999999999964
No 190
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=92.34 E-value=0.079 Score=45.43 Aligned_cols=30 Identities=10% Similarity=0.085 Sum_probs=26.9
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|++|.++||+.
T Consensus 93 ~l~~~~kPvIaav~G~a~GgG~~lala~D~r 123 (255)
T PRK07260 93 AIKQLPKPVIMCVDGAVAGAAANMAVAADFC 123 (255)
T ss_pred HHHcCCCCEEEEecCeeehhhHHHHHhCCEE
Confidence 444899999999 999999999999999964
No 191
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=92.33 E-value=0.067 Score=46.09 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
...+++|+|+. +|.++|+|++|..+||+.
T Consensus 96 ~~~~~kpvIaav~G~a~GgG~~lalacD~r 125 (263)
T PRK07799 96 GRRLTKPLIAAVEGPAIAGGTEILQGTDIR 125 (263)
T ss_pred HhcCCCCEEEEECCeEeccHHHHHHhCCEE
Confidence 34789999999 999999999999999964
No 192
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=92.27 E-value=0.079 Score=45.52 Aligned_cols=29 Identities=24% Similarity=0.224 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 93 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ 122 (260)
T PRK05809 93 LENLDKPVIAAINGFALGGGCELSMACDIR 122 (260)
T ss_pred HHcCCCCEEEEEcCeeecHHHHHHHhCCEE
Confidence 44899999999 999999999999999964
No 193
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=92.03 E-value=0.061 Score=46.18 Aligned_cols=29 Identities=17% Similarity=0.214 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 88 l~~~~kPvIAav~G~a~GgG~~lalacD~~ 117 (255)
T PRK09674 88 LQAFNKPLIAAVNGYALGAGCELALLCDIV 117 (255)
T ss_pred HHhCCCCEEEEECCEeehHHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 194
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=92.01 E-value=0.056 Score=46.37 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=25.7
Q ss_pred cccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 114 EECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 114 ~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
..+++|||+. +|.++|+|++|.++||+.
T Consensus 89 ~~~~kPvIAav~G~a~GgG~~lal~cD~r 117 (255)
T PRK06563 89 RRLSKPLVVAVQGYCLTLGIELMLAADIV 117 (255)
T ss_pred hcCCCCEEEEEcCeeecHHHHHHHhCCEE
Confidence 3789999999 999999999999999964
No 195
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=92.01 E-value=0.08 Score=45.26 Aligned_cols=29 Identities=17% Similarity=0.051 Sum_probs=26.1
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|.+.||+.
T Consensus 85 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ 114 (248)
T PRK06072 85 IRFSDKIYISAINGVTAGACIGIALSTDFK 114 (248)
T ss_pred HHhCCCCEEEEECCeeehHHHHHHHhCCEE
Confidence 34889999999 999999999999999964
No 196
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=91.95 E-value=0.075 Score=45.67 Aligned_cols=30 Identities=23% Similarity=0.151 Sum_probs=26.6
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.++|+|+.|..+||+.
T Consensus 93 ~l~~~~kpvIAav~G~a~GgG~~lala~D~~ 123 (260)
T PRK07511 93 AIRAFPKPVIAAVEGAAAGAGFSLALACDLL 123 (260)
T ss_pred HHHcCCCCEEEEECCeeehHHHHHHHhCCEE
Confidence 334899999999 999999999999999964
No 197
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=91.95 E-value=0.086 Score=45.10 Aligned_cols=29 Identities=24% Similarity=0.363 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
...+++|+|+. +|.++|+|++|+.+||+.
T Consensus 90 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ 119 (249)
T PRK07110 90 ALNCPIPVIAAMQGHAIGGGLVLGLYADIV 119 (249)
T ss_pred HHcCCCCEEEEecCceechHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 198
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=91.94 E-value=0.086 Score=45.30 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|..+||+.
T Consensus 98 ~~~~~kpvIaav~G~a~GgG~~lalacD~~ 127 (262)
T PRK07509 98 WRRLPVPVIAALEGVCFGGGLQIALGADIR 127 (262)
T ss_pred HHhCCCCEEEEECCeeecchHHHHHhCCEE
Confidence 34789999999 999999999999999964
No 199
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=91.93 E-value=0.073 Score=44.46 Aligned_cols=26 Identities=15% Similarity=0.114 Sum_probs=23.5
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhc
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSL 140 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~ 140 (220)
..+|||++. +|.+.++|..|+.+||.
T Consensus 68 ~~~kpVia~v~g~a~s~gy~la~~aD~ 94 (211)
T cd07019 68 AAGKPVVVSAGGAAASGGYWISTPANY 94 (211)
T ss_pred hCCCCEEEEECCeehhHHHHHHHhCCE
Confidence 678999998 99999999999999983
No 200
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=91.90 E-value=0.082 Score=47.56 Aligned_cols=31 Identities=13% Similarity=0.053 Sum_probs=27.2
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
++..+++|+|+. +|.++|+|++|+++||+.-
T Consensus 95 ~i~~~~kPvIAaVnG~a~GgG~~LalacD~ri 126 (342)
T PRK05617 95 LIARYPKPYIALMDGIVMGGGVGISAHGSHRI 126 (342)
T ss_pred HHHhCCCCEEEEEcCEEEccHhHHhhhCCEEE
Confidence 344889999999 9999999999999999753
No 201
>PRK08788 enoyl-CoA hydratase; Validated
Probab=91.86 E-value=0.078 Score=46.60 Aligned_cols=27 Identities=11% Similarity=0.119 Sum_probs=25.2
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.+++|+|+. +|.|+|+|++|+++||+.
T Consensus 119 ~~pkPvIAaV~G~a~GgG~~LalacD~r 146 (287)
T PRK08788 119 GAGAISIALVQGDALGGGFEAALSHHTI 146 (287)
T ss_pred CCCCCEEEEECCeeehHHHHHHHhCCEE
Confidence 689999999 999999999999999964
No 202
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=91.85 E-value=0.076 Score=48.15 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=27.0
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|||+. +|.++|+|++|.++||+.
T Consensus 119 ~i~~~pKPVIAAVnG~AiGGGleLALaCDlr 149 (360)
T TIGR03200 119 AILGCDKPVICRVNGMRIGGGQEIGMAADFT 149 (360)
T ss_pred HHHhCCCCEEEEECCEeeeHHHHHHHhCCEE
Confidence 445899999999 999999999999999974
No 203
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=91.79 E-value=0.087 Score=45.96 Aligned_cols=31 Identities=16% Similarity=0.075 Sum_probs=27.2
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
++..+++|+|+. +|.++|+|++|+++||+.-
T Consensus 102 ~l~~~~kPvIAaV~G~a~GgG~~lalacD~ri 133 (278)
T PLN03214 102 RLLRSRLATVCAIRGACPAGGCAVSLCCDYRL 133 (278)
T ss_pred HHHcCCCCEEEEEcCcccchHHHHHHhCCEEE
Confidence 344899999999 9999999999999999743
No 204
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=91.75 E-value=0.21 Score=47.34 Aligned_cols=36 Identities=33% Similarity=0.547 Sum_probs=32.5
Q ss_pred CCcEEEeecCccccchhhhhhhccEEEEeCC-ceEec
Q psy8151 175 PKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTL 210 (220)
Q Consensus 175 ~kp~Iaav~G~a~GgG~~lal~cD~rva~~~-a~f~~ 210 (220)
-+|.|++|-|.|.|||..+-..||++|+.++ +++.+
T Consensus 163 ~IPqIsvv~G~c~gGgaY~pal~D~~imv~~~~~mfl 199 (526)
T COG4799 163 VIPQISVVMGPCAGGGAYSPALTDFVIMVRDQSYMFL 199 (526)
T ss_pred CCCEEEEEEecCcccccccccccceEEEEcCCccEEe
Confidence 3999999999999999999999999999988 65544
No 205
>PLN02888 enoyl-CoA hydratase
Probab=91.73 E-value=0.062 Score=46.48 Aligned_cols=28 Identities=29% Similarity=0.479 Sum_probs=25.9
Q ss_pred cccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 114 EECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 114 ~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
..+++|+|+. +|.++|+|++|+.+||+.
T Consensus 96 ~~~~kPvIaav~G~a~GgG~~lal~cD~r 124 (265)
T PLN02888 96 ERCRKPIIGAINGFAITAGFEIALACDIL 124 (265)
T ss_pred HhCCCCEEEEECCeeechHHHHHHhCCEE
Confidence 4889999999 999999999999999964
No 206
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=91.69 E-value=0.081 Score=45.95 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|.++||+.
T Consensus 103 l~~~~kPvIAav~G~a~GgG~~lalacD~r 132 (273)
T PRK07396 103 IRTCPKPVIAMVAGYAIGGGHVLHLVCDLT 132 (273)
T ss_pred HHhCCCCEEEEECCEEehHHHHHHHhCCEE
Confidence 34899999999 999999999999999964
No 207
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=91.54 E-value=0.079 Score=45.56 Aligned_cols=27 Identities=19% Similarity=0.256 Sum_probs=25.3
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.+++|+|+. +|.++|+|++|..+||+.
T Consensus 92 ~~~kPvIaav~G~a~GgG~~lalacD~r 119 (259)
T PRK06494 92 DLDKPIIAAVNGVAMGGGFELALACDLI 119 (259)
T ss_pred cCCCCEEEEECCEEecHHHHHHHhCCEE
Confidence 789999999 999999999999999964
No 208
>PRK08321 naphthoate synthase; Validated
Probab=91.17 E-value=0.071 Score=47.06 Aligned_cols=29 Identities=17% Similarity=0.113 Sum_probs=26.3
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..+++|+|+. +|.++|+|++|.++||+.
T Consensus 131 l~~~pkP~IAaV~G~a~GgG~~lalacD~r 160 (302)
T PRK08321 131 IRFMPKVVIAVVPGWAAGGGHSLHVVCDLT 160 (302)
T ss_pred HHcCCCCEEEEEcCeeehHHHHHHHhCCEE
Confidence 44889999999 999999999999999964
No 209
>PLN02921 naphthoate synthase
Probab=90.94 E-value=0.09 Score=47.07 Aligned_cols=30 Identities=20% Similarity=0.112 Sum_probs=26.7
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|||+. +|.++|+|++|..+||+.
T Consensus 156 ~l~~~~kPvIAaVnG~a~GGG~~LalacD~r 186 (327)
T PLN02921 156 QIRRLPKPVIAMVAGYAVGGGHILHMVCDLT 186 (327)
T ss_pred HHHhCCCCEEEEECCEEecHHHHHHHhCCEE
Confidence 334899999999 999999999999999964
No 210
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=90.62 E-value=2.4 Score=37.13 Aligned_cols=145 Identities=17% Similarity=0.214 Sum_probs=81.9
Q ss_pred chhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC-----CceecCCCcccccccchhhhhhhhhHHHHhhhccccccc
Q psy8151 43 DKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG-----KIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECR 117 (220)
Q Consensus 43 ~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G-----~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 117 (220)
|||+.-+.+-+. +-|++.....+..=-|++|.| +.--+=.|.+.+.+.... ..-++|.+.++.... .+++
T Consensus 85 dPL~F~d~k~Y~---~rL~~a~~~tg~~davvtg~g~i~G~pvv~av~df~FmgGSmGs-VvGeki~ra~E~A~e-~k~P 159 (294)
T COG0777 85 DPLKFPDSKKYK---DRLEAARKKTGLDDAVVTGEGTINGLPVVLAVMDFAFMGGSMGS-VVGEKITRAIERAIE-DKLP 159 (294)
T ss_pred CcccCCcchhhH---HHHHHHHhhcCCCcceEEEeeEECCeEEEEEEEeccccccchhH-HHHHHHHHHHHHHHH-hCCC
Confidence 344444444444 555555555555556777776 333333444433322221 122444444444431 1244
Q ss_pred eEEEEecCceeeeecchhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcEEEeecCccccch-hhhhhh
Q psy8151 118 VIVLSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGG-MSLITA 196 (220)
Q Consensus 118 ~pvi~~~G~~fg~G~dL~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG-~~lal~ 196 (220)
.+++++ +||.-+.+.. -.+.++ ......+.++.....|.|+.+..+..||= ..+++.
T Consensus 160 ~v~f~a-----SGGARMQEg~----------------lSLMQM-aktsaAl~~l~ea~lpyIsVLt~PTtGGVsASfA~l 217 (294)
T COG0777 160 LVLFSA-----SGGARMQEGI----------------LSLMQM-AKTSAALKRLSEAGLPYISVLTDPTTGGVSASFAML 217 (294)
T ss_pred EEEEec-----CcchhHhHHH----------------HHHHHH-HHHHHHHHHHHhcCCceEEEecCCCccchhHhHHhc
Confidence 444443 3455444321 011122 22344566777889999999999998875 458889
Q ss_pred ccEEEEeCCceEecccce
Q psy8151 197 ADIRYATKDAWFTLKEVD 214 (220)
Q Consensus 197 cD~rva~~~a~f~~pe~~ 214 (220)
-|+.||.+.|.+++...+
T Consensus 218 GDi~iAEP~AlIGFAGpR 235 (294)
T COG0777 218 GDIIIAEPGALIGFAGPR 235 (294)
T ss_pred cCeeecCcccccccCcch
Confidence 999999999999987654
No 211
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=90.48 E-value=0.47 Score=39.46 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=37.9
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccE--EEEeCCceEecc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLK 211 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~--rva~~~a~f~~p 211 (220)
++..|...+.||++.+.|.|.+.|.-++++||- |++.++++|.+-
T Consensus 73 I~d~i~~~~~~V~t~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiH 119 (197)
T PRK14512 73 IFNMIRFVKPKVFTIGVGLVASAAALIFLAAKKESRFSLPNARYLLH 119 (197)
T ss_pred HHHHHHhCCCCEEEEEEeeeHhHHHHHHhcCCcCceeECCCCcEEEE
Confidence 344556678999999999999999999999985 999999887643
No 212
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=90.19 E-value=0.11 Score=44.48 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=25.2
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.+++|+|+. +|.++|+|++|..+||+.
T Consensus 89 ~~~kPvIaav~G~a~GgG~~lalacD~~ 116 (254)
T PRK08252 89 PPRKPLIAAVEGYALAGGFELALACDLI 116 (254)
T ss_pred cCCCCEEEEECCEEehHHHHHHHhCCEE
Confidence 689999999 999999999999999964
No 213
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=90.12 E-value=0.12 Score=44.37 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=25.5
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
.++||+|+. +|.++|+|++|...||+.-
T Consensus 91 ~~~kPvIaav~G~a~GgG~~lalacD~~i 119 (254)
T PRK08259 91 RLSKPVIAAVSGYAVAGGLELALWCDLRV 119 (254)
T ss_pred cCCCCEEEEECCEEEhHHHHHHHhCCEEE
Confidence 679999999 9999999999999999643
No 214
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=89.89 E-value=0.16 Score=46.42 Aligned_cols=30 Identities=10% Similarity=0.137 Sum_probs=26.7
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..++||+|+. +|.++|+|+.|.+.||+.
T Consensus 100 ~i~~~~kPvIAaV~G~a~GgG~~LalacD~r 130 (379)
T PLN02874 100 HIHTYKKTQVALVHGLVMGGGAGLMVPMKFR 130 (379)
T ss_pred HHHhCCCCEEEEecCeEEecHHHHHHhCCeE
Confidence 344889999999 999999999999999964
No 215
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=89.29 E-value=2.4 Score=40.12 Aligned_cols=51 Identities=18% Similarity=0.257 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhhhc----cEEEEeCCceEec
Q psy8151 160 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAA----DIRYATKDAWFTL 210 (220)
Q Consensus 160 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~c----D~rva~~~a~f~~ 210 (220)
.+....+++.++..+.+|+|..|=|.+.|||....... |+++|.++++++.
T Consensus 352 ~~~~ga~~~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~~v 406 (493)
T PF01039_consen 352 IIRAGARLLYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEIGV 406 (493)
T ss_dssp HHHHHHHHHHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EEES
T ss_pred hHHHHHHHHHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcceeee
Confidence 44556777888888999999999999999887555555 8999999998885
No 216
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=88.98 E-value=0.19 Score=49.79 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=27.0
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.|+|+|++|+++||+.
T Consensus 103 ~i~~~~kPvIAav~G~a~GgG~eLALacD~r 133 (737)
T TIGR02441 103 RIEKSQKPIVAAISGSCLGGGLELALACHYR 133 (737)
T ss_pred HHHhCCCCEEEEECCEeecHHHHHHHhCCEE
Confidence 444899999999 999999999999999964
No 217
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=88.73 E-value=0.19 Score=49.66 Aligned_cols=31 Identities=16% Similarity=0.126 Sum_probs=27.2
Q ss_pred ccccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 111 SENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 111 ~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.++..++||+|+. +|.++|+|++|+++||+.
T Consensus 96 ~~i~~~~kPvIAav~G~a~GgG~~LAlacD~r 127 (715)
T PRK11730 96 NRLEDLPVPTVAAINGYALGGGCECVLATDYR 127 (715)
T ss_pred HHHHcCCCCEEEEECCEeehHHHHHHHhCCEE
Confidence 3445899999999 999999999999999964
No 218
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=88.67 E-value=0.19 Score=49.50 Aligned_cols=30 Identities=27% Similarity=0.307 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..+++|+|+. +|.|+|+|++|+++||+.
T Consensus 96 ~i~~~~kPvIAaV~G~a~GgG~~LalacD~r 126 (708)
T PRK11154 96 EIEALPIPVVAAIHGACLGGGLELALACHYR 126 (708)
T ss_pred HHHhCCCCEEEEECCeeechHHHHHHhCCEE
Confidence 444899999999 999999999999999964
No 219
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=88.22 E-value=0.64 Score=37.52 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-cCceeee
Q psy8151 52 MWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-AGKIFTA 130 (220)
Q Consensus 52 ~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~fg~ 130 (220)
...+|.+++++++.|+++|+|||++ ||+|.|+.... .+.+.++.+ .+++||||+. +|.+.++
T Consensus 23 ~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~----------~~~~~i~~~---~~~~kpVia~v~G~a~g~ 85 (177)
T cd07014 23 SGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE----------VIRAELAAA---RAAGKPVVASGGGNAASG 85 (177)
T ss_pred CHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH----------HHHHHHHHH---HhCCCCEEEEECCchhHH
Confidence 4679999999999999999999986 68888876421 223333333 3789999998 9999999
Q ss_pred ecchhhhhhcc
Q psy8151 131 GLDLSGMLSLG 141 (220)
Q Consensus 131 G~dL~~~~d~~ 141 (220)
|..|+.+||..
T Consensus 86 g~~la~a~D~i 96 (177)
T cd07014 86 GYWISTPANYI 96 (177)
T ss_pred HHHHHHhCCEE
Confidence 99999999953
No 220
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=87.86 E-value=0.24 Score=48.85 Aligned_cols=30 Identities=17% Similarity=0.151 Sum_probs=26.8
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
++..++||+|+. +|.|+|+|++|+++||+.
T Consensus 97 ~i~~~pkPvIAai~G~alGGGleLalacD~r 127 (714)
T TIGR02437 97 KLEDLPVPTVAAINGIALGGGCECVLATDFR 127 (714)
T ss_pred HHHhCCCCEEEEECCeeecHHHHHHHhCCEE
Confidence 444899999999 999999999999999963
No 221
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=87.53 E-value=2.7 Score=40.54 Aligned_cols=51 Identities=14% Similarity=0.233 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhhhcCCCcEEEeecCccccchhhhhh----hccEEEEeCCceEec
Q psy8151 160 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTL 210 (220)
Q Consensus 160 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal----~cD~rva~~~a~f~~ 210 (220)
......+++..+....+|.|++|=|.|+|+|..-.. ..|+++|.++|+++.
T Consensus 424 ~~~~~a~l~~A~a~~~VP~isvi~g~a~G~g~~aM~g~~~~~d~~~awp~A~i~v 478 (569)
T PLN02820 424 IAKAGAKMVMAVACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGV 478 (569)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEECCcchHHHHHhcCcCCCCCEEEECCCCeEEe
Confidence 456677788888899999999999999998754332 578999998888874
No 222
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=86.83 E-value=0.33 Score=44.77 Aligned_cols=30 Identities=10% Similarity=-0.086 Sum_probs=26.6
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.+..++||+|+. +|.++|||+.|...||+.
T Consensus 128 ~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~r 158 (401)
T PLN02157 128 LLGTYLKPHVAILNGVTMGGGTGVSIPGTFR 158 (401)
T ss_pred HHHhCCCCEEEEEeCeEeehhHHHHHhCCEE
Confidence 344899999999 999999999999999864
No 223
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=86.31 E-value=2.4 Score=35.32 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=40.2
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhcc--EEEEeCCceEecccce
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVD 214 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD--~rva~~~a~f~~pe~~ 214 (220)
++..|...+.||...+-|.|.+.|.-+++++| -|++.++++|.+-...
T Consensus 80 Iyd~m~~~~~~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~ 129 (200)
T CHL00028 80 IYDTMQFVKPDVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPA 129 (200)
T ss_pred HHHHHHhcCCCEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCc
Confidence 34556677899999999999999999999998 6999999998865543
No 224
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=85.69 E-value=0.38 Score=44.00 Aligned_cols=29 Identities=14% Similarity=0.069 Sum_probs=26.1
Q ss_pred ccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 113 NEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 113 ~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
+..++||+|+. +|.+.|||+.|...||+.
T Consensus 101 i~~~pKPvIa~v~G~a~GGG~~Lal~~D~r 130 (381)
T PLN02988 101 MATYSKAQVSILNGIVMGGGAGVSVHGRFR 130 (381)
T ss_pred HHHCCCCEEEEecCeEeehhhHHhhcCCeE
Confidence 34799999999 999999999999999864
No 225
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=84.35 E-value=0.57 Score=43.29 Aligned_cols=30 Identities=10% Similarity=-0.072 Sum_probs=26.4
Q ss_pred cccccceEEEEe-cCceeeeecchhhhhhcc
Q psy8151 112 ENEECRVIVLSA-AGKIFTAGLDLSGMLSLG 141 (220)
Q Consensus 112 ~~~~~~~pvi~~-~G~~fg~G~dL~~~~d~~ 141 (220)
.+..++||+|+. +|.++|||+.|...||+.
T Consensus 133 ~i~~~pKPvIA~v~G~amGGG~gLal~~D~r 163 (407)
T PLN02851 133 LQGTYLKPNVAIMDGITMGCGAGISIPGMFR 163 (407)
T ss_pred HHHhCCCCEEEEEcCEEeeHHHHHHHhCCEE
Confidence 344889999999 999999999999999863
No 226
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=82.33 E-value=0.72 Score=38.21 Aligned_cols=73 Identities=11% Similarity=0.117 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-cCcee
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-AGKIF 128 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~f 128 (220)
..++.+|.++|+.++.|+++|+|+|.+ +|.|+|+... ..+.+. +.....++|||++. +|.+.
T Consensus 16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~----------~~i~~~---i~~~~~~~kpvia~v~g~~~ 78 (208)
T cd07023 16 GIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVAS----------EEIYRE---IRRLRKAKKPVVASMGDVAA 78 (208)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHH----------HHHHHH---HHHHHhcCCcEEEEECCcch
Confidence 567889999999999999999999988 5788887642 122222 33333678999998 99999
Q ss_pred eeecchhhhhh
Q psy8151 129 TAGLDLSGMLS 139 (220)
Q Consensus 129 g~G~dL~~~~d 139 (220)
++|..++..||
T Consensus 79 s~g~~lA~aaD 89 (208)
T cd07023 79 SGGYYIAAAAD 89 (208)
T ss_pred hHHHHHHhhCC
Confidence 99999999997
No 227
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=81.98 E-value=0.37 Score=39.42 Aligned_cols=71 Identities=15% Similarity=0.094 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-c---C
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-A---G 125 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~---G 125 (220)
..+...+.+.++.++.++ ++.|+|. .-|.|+++.... +.++.+ ..+++|||+. + |
T Consensus 12 ~~~~~~l~~~l~~a~~~~-~~~vvl~----InSpGG~v~~~~-------------~i~~~l---~~~~kPvia~v~~~~G 70 (187)
T cd07020 12 PATADYLERAIDQAEEGG-ADALIIE----LDTPGGLLDSTR-------------EIVQAI---LASPVPVVVYVYPSGA 70 (187)
T ss_pred hHHHHHHHHHHHHHHhCC-CCEEEEE----EECCCCCHHHHH-------------HHHHHH---HhCCCCEEEEEecCCC
Confidence 667778889999988665 7877774 345555554322 112222 2789999998 7 9
Q ss_pred ceeeeecchhhhhhcc
Q psy8151 126 KIFTAGLDLSGMLSLG 141 (220)
Q Consensus 126 ~~fg~G~dL~~~~d~~ 141 (220)
.+.++|..+.++||..
T Consensus 71 ~AasgG~~iala~D~i 86 (187)
T cd07020 71 RAASAGTYILLAAHIA 86 (187)
T ss_pred CchhHHHHHHHhCCce
Confidence 9999999999999953
No 228
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=81.91 E-value=0.53 Score=39.98 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=25.6
Q ss_pred ccceEEEEe-cCceeeeecchhhhhhccc
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLSLGQ 142 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d~~~ 142 (220)
.++||||+. .|++.|||.-|...||++-
T Consensus 114 ~~PKpViA~V~G~AiGGGhvlhvvCDLTi 142 (282)
T COG0447 114 TMPKPVIAMVAGYAIGGGHVLHVVCDLTI 142 (282)
T ss_pred hCCcceEEEEeeEeccCccEEEEEeeeee
Confidence 899999999 9999999999999998753
No 229
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=80.81 E-value=0.73 Score=38.30 Aligned_cols=70 Identities=10% Similarity=0.195 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-cCceeeee
Q psy8151 53 WLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-AGKIFTAG 131 (220)
Q Consensus 53 ~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~fg~G 131 (220)
..+|.++|+.+..|+++|+|+|+.. |.|+++.... +..+.+...+ ..+||++- +|.+.++|
T Consensus 15 ~~~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~~-------------~l~~~i~~~~-~~kpvia~v~g~a~s~g 76 (207)
T TIGR00706 15 PEDFDKKIKRIKDDKSIKALLLRIN----SPGGTVVASE-------------EIYEKLKKLK-AKKPVVASMGGVAASGG 76 (207)
T ss_pred HHHHHHHHHHHhhCCCccEEEEEec----CCCCCHHHHH-------------HHHHHHHHhc-CCCCEEEEECCccchHH
Confidence 4578899999999999999999875 6777665321 1222222111 24899987 99999999
Q ss_pred cchhhhhhc
Q psy8151 132 LDLSGMLSL 140 (220)
Q Consensus 132 ~dL~~~~d~ 140 (220)
..++..||.
T Consensus 77 ~~la~aaD~ 85 (207)
T TIGR00706 77 YYIAMAADE 85 (207)
T ss_pred HHHHhcCCE
Confidence 999999973
No 230
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=80.41 E-value=3.5 Score=34.00 Aligned_cols=46 Identities=13% Similarity=0.212 Sum_probs=35.1
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhcc--EEEEeCCceEecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEV 213 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD--~rva~~~a~f~~pe~ 213 (220)
+..|...+.|+...+.|.|.+.|.-+++++| .|++.++++|.+-+.
T Consensus 77 ~d~l~~~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p 124 (191)
T TIGR00493 77 YDTMQFIKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQP 124 (191)
T ss_pred HHHHHhcCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecC
Confidence 3344555667777778999999988888655 699999999887554
No 231
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=79.35 E-value=0.68 Score=36.64 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-cCceee
Q psy8151 51 TMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-AGKIFT 129 (220)
Q Consensus 51 ~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~fg 129 (220)
.+..++.+.|+.++.+..+ .+.+.+.| +++..-. ...+.+. .+++||++. .|.+.+
T Consensus 15 ~~~~~~~~~l~~~~~~~~i-~l~inspG------G~~~~~~-------------~i~~~i~---~~~~pvi~~v~g~a~s 71 (160)
T cd07016 15 VTAKEFKDALDALGDDSDI-TVRINSPG------GDVFAGL-------------AIYNALK---RHKGKVTVKIDGLAAS 71 (160)
T ss_pred cCHHHHHHHHHhccCCCCE-EEEEECCC------CCHHHHH-------------HHHHHHH---hcCCCEEEEEcchHHh
Confidence 3456788888888887433 34444444 3332111 1122222 678899988 999999
Q ss_pred eecchhhhhhc
Q psy8151 130 AGLDLSGMLSL 140 (220)
Q Consensus 130 ~G~dL~~~~d~ 140 (220)
+|..+...||.
T Consensus 72 ~g~~ia~a~d~ 82 (160)
T cd07016 72 AASVIAMAGDE 82 (160)
T ss_pred HHHHHHhcCCe
Confidence 99999999984
No 232
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=79.20 E-value=0.88 Score=38.23 Aligned_cols=72 Identities=13% Similarity=0.145 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-cCcee
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-AGKIF 128 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~f 128 (220)
...+.+|.+.|+++..|+.+|+|+|+..++.| ++.++.++. ...+.++ +.+|||++- ++ +.
T Consensus 28 ~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el~-------------~~i~~~~---~~~kpVia~~~~-~~ 89 (222)
T cd07018 28 ELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEELR-------------QALERFR---ASGKPVIAYADG-YS 89 (222)
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHHH-------------HHHHHHH---HhCCeEEEEeCC-CC
Confidence 67788999999999999999999999999887 666665542 2222222 567899887 65 78
Q ss_pred eeecchhhhhh
Q psy8151 129 TAGLDLSGMLS 139 (220)
Q Consensus 129 g~G~dL~~~~d 139 (220)
++|..++.+||
T Consensus 90 sggy~lasaad 100 (222)
T cd07018 90 QGQYYLASAAD 100 (222)
T ss_pred chhhhhhhhCC
Confidence 89989999887
No 233
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=78.33 E-value=6.8 Score=32.54 Aligned_cols=46 Identities=13% Similarity=0.195 Sum_probs=37.7
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccE--EEEeCCceEecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEV 213 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~--rva~~~a~f~~pe~ 213 (220)
+..|...+.||...+.|.|.+.|.-+++++|- |++.++++|.+-..
T Consensus 76 yd~m~~~~~~V~t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP 123 (196)
T PRK12551 76 FDTMQHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQP 123 (196)
T ss_pred HHHHHhcCCCEEEEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecC
Confidence 44556678889999999999999999999885 88999999876543
No 234
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=77.39 E-value=4.2 Score=34.46 Aligned_cols=47 Identities=13% Similarity=0.121 Sum_probs=39.3
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccE--EEEeCCceEecccc
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEV 213 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~--rva~~~a~f~~pe~ 213 (220)
++..|...+-||...+-|.|.+.|.-+++++|. |++.++++|.+-..
T Consensus 104 Iyd~m~~~~~~V~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP 152 (221)
T PRK14514 104 IYDTMQFISSDVATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQP 152 (221)
T ss_pred HHHHHHhcCCCEEEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccC
Confidence 345566678899999999999999999999996 99999999876544
No 235
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=73.58 E-value=13 Score=34.80 Aligned_cols=43 Identities=30% Similarity=0.302 Sum_probs=26.3
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhh-hhhccEEEEeCC--ceEecc
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSL-ITAADIRYATKD--AWFTLK 211 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~l-al~cD~rva~~~--a~f~~p 211 (220)
.+.+++..+++|+|++| ||-.- +.| =..+|+|-.|+. |.+..|
T Consensus 216 ~vaRAi~~s~iPvISAV-GHEtD--~tL~DfVAD~RApTPTaAAE~~vP 261 (440)
T COG1570 216 IVARAIAASRIPVISAV-GHETD--FTLADFVADLRAPTPTAAAELVVP 261 (440)
T ss_pred HHHHHHHhCCCCeEeec-ccCCC--ccHHHhhhhccCCCchHHHHHhCC
Confidence 46788999999999988 33221 111 134677777754 334444
No 236
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=73.53 E-value=3.1 Score=36.74 Aligned_cols=43 Identities=26% Similarity=0.363 Sum_probs=34.9
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCCceEec
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTL 210 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~a~f~~ 210 (220)
+..+.++++|+||.|=|---+||.--...+|-+.|-++++++.
T Consensus 181 L~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV 223 (317)
T COG0825 181 LREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV 223 (317)
T ss_pred HHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee
Confidence 4556789999999999998777765555679999999998874
No 237
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=72.88 E-value=7.3 Score=32.53 Aligned_cols=48 Identities=19% Similarity=0.263 Sum_probs=39.6
Q ss_pred HHHhhhcCCCcEEEeecCccccchhhhhhhccE--EEEeCCceEecccce
Q psy8151 167 SISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVD 214 (220)
Q Consensus 167 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~--rva~~~a~f~~pe~~ 214 (220)
++..|...+-||...+.|.|.+.+.-+++++|- |++.++|++-+-...
T Consensus 77 Iyd~m~~~~~~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~ 126 (201)
T PRK14513 77 IYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGS 126 (201)
T ss_pred HHHHHHhcCCCEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCC
Confidence 345566678899999999999999999999995 999999998765443
No 238
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=63.63 E-value=11 Score=31.44 Aligned_cols=84 Identities=14% Similarity=0.220 Sum_probs=61.9
Q ss_pred EcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHH
Q psy8151 26 LNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGE 105 (220)
Q Consensus 26 ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~ 105 (220)
.++|...|++. +..++.+|.++|++++.|+++|+|+|+. +|.|.++... +.+..
T Consensus 12 ~~~~~~~~~~~------------~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~----------~~l~~ 65 (214)
T cd07022 12 VPRGSWLEASS------------GLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGV----------FELAD 65 (214)
T ss_pred eCCCCcccCCC------------CcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHH----------HHHHH
Confidence 46676667543 2788999999999999999999999974 5666654322 12222
Q ss_pred HHhhhccccccceEEEEe-cCceeeeecchhhhhh
Q psy8151 106 CFDSLSENEECRVIVLSA-AGKIFTAGLDLSGMLS 139 (220)
Q Consensus 106 ~~~~~~~~~~~~~pvi~~-~G~~fg~G~dL~~~~d 139 (220)
.+...++ +|||++. +|.+.++|..++..||
T Consensus 66 ---~l~~~~~-~KpViA~v~g~a~s~gy~lA~~aD 96 (214)
T cd07022 66 ---AIRAARA-GKPIVAFVNGLAASAAYWIASAAD 96 (214)
T ss_pred ---HHHHHhc-CCCEEEEECCchhhHHHHHHhcCC
Confidence 2332224 6999998 9999999999999998
No 239
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=63.37 E-value=14 Score=34.43 Aligned_cols=44 Identities=27% Similarity=0.129 Sum_probs=27.4
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCC--ceEecc
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLK 211 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~--a~f~~p 211 (220)
.+.+++..+|+|||++| ||-.--- -.=+.+|.|..|+. |.+..|
T Consensus 210 ~~~rai~~~~~Pvis~i-GHe~D~t-i~D~vAd~ra~TPtaaae~~~p 255 (432)
T TIGR00237 210 KVARAIFLSKIPIISAV-GHETDFT-ISDFVADLRAPTPSAAAEIVSP 255 (432)
T ss_pred HHHHHHHcCCCCEEEec-CcCCCcc-HHHHhhhccCCCcHHHHHHhCc
Confidence 45778899999999987 3322111 12346788888764 334444
No 240
>KOG1389|consensus
Probab=61.45 E-value=10 Score=34.17 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=31.1
Q ss_pred CCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcc
Q psy8151 28 RPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLS 64 (220)
Q Consensus 28 ~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 64 (220)
.|+|.|...|++.++|||+++.......|...+.+=.
T Consensus 363 d~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrg 399 (435)
T KOG1389|consen 363 DPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRG 399 (435)
T ss_pred CHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhc
Confidence 5889999999999999999999988877766665533
No 241
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=61.05 E-value=1.8 Score=34.08 Aligned_cols=70 Identities=16% Similarity=0.205 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-cCcee
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-AGKIF 128 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~f 128 (220)
..++.+|.+.|+.++.|++++.|+|.. +|.|.|+.... +..+.+. .+++||++. +|.+.
T Consensus 10 ~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~~-------------~i~~~l~---~~~kpvva~~~g~~~ 69 (161)
T cd00394 10 DVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAGM-------------NIVDALQ---ASRKPVIAYVGGQAA 69 (161)
T ss_pred cchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHHH-------------HHHHHHH---HhCCCEEEEECChhH
Confidence 677889999999999999999999965 56777665322 1122222 556899988 99999
Q ss_pred eeecchhhhhh
Q psy8151 129 TAGLDLSGMLS 139 (220)
Q Consensus 129 g~G~dL~~~~d 139 (220)
++|..|...||
T Consensus 70 s~g~~la~~~d 80 (161)
T cd00394 70 SAGYYIATAAN 80 (161)
T ss_pred HHHHHHHhCCC
Confidence 99999999998
No 242
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=59.49 E-value=16 Score=32.12 Aligned_cols=38 Identities=29% Similarity=0.291 Sum_probs=24.6
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCC
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD 205 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~ 205 (220)
.+.+++..+|.|||++| ||-.=- .-.=+.+|.|..|+.
T Consensus 98 ~varai~~~~~PvisaI-GHe~D~-ti~D~vAd~ra~TPt 135 (319)
T PF02601_consen 98 EVARAIAASPIPVISAI-GHETDF-TIADFVADLRAPTPT 135 (319)
T ss_pred HHHHHHHhCCCCEEEec-CCCCCc-hHHHHHHHhhCCCHH
Confidence 45778889999999987 333221 112345777777764
No 243
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=54.04 E-value=6.4 Score=30.22 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=28.6
Q ss_pred CCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhc
Q psy8151 28 RPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSL 63 (220)
Q Consensus 28 ~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 63 (220)
.+++.|...|.+.++||+.++...++.++...|+.-
T Consensus 65 ~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~~ 100 (123)
T PF02803_consen 65 DPEKVNPNGGALALGHPLGASGARLVVELAHQLRRR 100 (123)
T ss_dssp GGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHHH
T ss_pred cccccCcccccccccccccccccchhhhhHHHHHHh
Confidence 457899999999999999999999999888888763
No 244
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=50.81 E-value=13 Score=30.16 Aligned_cols=70 Identities=11% Similarity=0.112 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-c---C
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-A---G 125 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~---G 125 (220)
..+...|.+.++.++++ ..+.|+|. .-|.|+++.... ..++.+. ..++||++- . |
T Consensus 12 ~~~~~~l~~~l~~A~~~-~~~~i~l~----inSPGG~v~~~~-------------~I~~~i~---~~~~pvv~~v~p~g~ 70 (172)
T cd07015 12 SYTYDQFDRYITIAEQD-NAEAIIIE----LDTPGGRADAAG-------------NIVQRIQ---QSKIPVIIYVYPPGA 70 (172)
T ss_pred HhHHHHHHHHHHHHhcC-CCCeEEEE----EECCCCCHHHHH-------------HHHHHHH---hcCcCEEEEEecCCC
Confidence 66777888899988775 46776663 445555554322 1122222 456666654 4 7
Q ss_pred ceeeeecchhhhhhc
Q psy8151 126 KIFTAGLDLSGMLSL 140 (220)
Q Consensus 126 ~~fg~G~dL~~~~d~ 140 (220)
.+.++|.-+.+.+|.
T Consensus 71 ~AaSag~~I~~a~~~ 85 (172)
T cd07015 71 SAASAGTYIALGSHL 85 (172)
T ss_pred eehhHHHHHHHhcCc
Confidence 888888888887763
No 245
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=49.95 E-value=31 Score=31.94 Aligned_cols=38 Identities=29% Similarity=0.205 Sum_probs=25.2
Q ss_pred HHHHhhhcCCCcEEEeecCccccchhhhhhhccEEEEeCC
Q psy8151 166 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD 205 (220)
Q Consensus 166 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~rva~~~ 205 (220)
.+..++..+|+|||++| ||-.=- .-.=+.+|.|..|+.
T Consensus 215 ~v~~ai~~~~~Pvis~I-GHE~D~-tl~D~vAd~ra~TPt 252 (438)
T PRK00286 215 AVARAIAASRIPVISAV-GHETDF-TIADFVADLRAPTPT 252 (438)
T ss_pred HHHHHHHcCCCCEEEec-cCCCCc-cHHHHhhhccCCChH
Confidence 45778899999999987 333211 112346788888765
No 246
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=49.70 E-value=52 Score=31.55 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCcEEEeecCccccchhhh----hhhccEEEEeCCceEec
Q psy8151 157 LRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSL----ITAADIRYATKDAWFTL 210 (220)
Q Consensus 157 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~l----al~cD~rva~~~a~f~~ 210 (220)
....+++..+++.++.+..+|.|..|-|.+.|||... ++..|+.+|..+|+++.
T Consensus 379 ~~giik~Gakl~~A~aeatVPkitvI~rkayGga~~~M~~~~~~~~~~~AwP~a~iaV 436 (526)
T COG4799 379 YGGIIKHGAKLLYAVAEATVPKITVITRKAYGGAYYVMGGKALGPDFNYAWPTAEIAV 436 (526)
T ss_pred hChHHHhhhHHHhhHhhccCCeEEEEecccccceeeeecCccCCCceeEecCcceeee
Confidence 3455677788899999999999999999999999654 34578888888877764
No 247
>KOG1390|consensus
Probab=47.52 E-value=21 Score=32.24 Aligned_cols=49 Identities=12% Similarity=0.129 Sum_probs=40.9
Q ss_pred CCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEec
Q psy8151 28 RPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSA 76 (220)
Q Consensus 28 ~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g 76 (220)
.|+|.|.-.|+..|+|||+.-...++..|...|++-....++-.|.--|
T Consensus 337 dP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~~g~~GvAaiCnGG 385 (396)
T KOG1390|consen 337 DPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQKGGKIGVAAICNGG 385 (396)
T ss_pred CHhhccCCCceeecCCCcCCcchhHHHHHHHHHHhhCCceeEEEEecCC
Confidence 6999999999999999999999999999999998866666555554433
No 248
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=46.72 E-value=36 Score=29.16 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCcEEEeecCccccchhh-hhhhccEEEEeCCce
Q psy8151 157 LRKLITTYQKSISSLERCPKPVISAVHGACIGGGMS-LITAADIRYATKDAW 207 (220)
Q Consensus 157 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~-lal~cD~rva~~~a~ 207 (220)
+.+.+....+.+..-+...-|+|+.|-|.+++|||- -.+.+|-.||-+++.
T Consensus 87 i~~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~GlqA~rl~AL~ga~ 138 (234)
T PF06833_consen 87 INQALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQANRLIALPGAM 138 (234)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHHhcchhcCCCCe
Confidence 445556677778888889999999999999999964 667888888877654
No 249
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=43.79 E-value=33 Score=29.13 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=37.7
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccE--EEEeCCceEecccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEV 213 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~--rva~~~a~f~~pe~ 213 (220)
+..+...+-+|...+-|.|.+.+.-+++++|- |++.++++|-+-..
T Consensus 100 yD~m~~ik~~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP 147 (222)
T PRK12552 100 CDTMRYIKPPVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQP 147 (222)
T ss_pred HHHHHhcCCCeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccC
Confidence 44555667789999999999999999999995 99999999876544
No 250
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=43.67 E-value=27 Score=29.21 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=36.7
Q ss_pred HHhhhcCCCcEEEeecCccccchhhhhhhccEE--EEeCCceEeccc
Q psy8151 168 ISSLERCPKPVISAVHGACIGGGMSLITAADIR--YATKDAWFTLKE 212 (220)
Q Consensus 168 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~r--va~~~a~f~~pe 212 (220)
+..+...+.||...+-|.|..-|.-|++++|-. ++.++|+|-+-.
T Consensus 78 ydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHq 124 (200)
T COG0740 78 YDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQ 124 (200)
T ss_pred HHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEec
Confidence 344556799999999999999999999999885 888888876543
No 251
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=40.73 E-value=37 Score=26.45 Aligned_cols=23 Identities=26% Similarity=0.535 Sum_probs=15.5
Q ss_pred HHHHHHHhcccCCcceEEEEecC
Q psy8151 55 EIGECFDSLSENEECRVIILSAA 77 (220)
Q Consensus 55 ~l~~~l~~~~~d~~~rvvvl~g~ 77 (220)
.+.+.++.+.+||++|+|++=-.
T Consensus 41 ~~~d~l~~~~~D~~t~~I~ly~E 63 (138)
T PF13607_consen 41 DFADLLEYLAEDPDTRVIVLYLE 63 (138)
T ss_dssp -HHHHHHHHCT-SS--EEEEEES
T ss_pred CHHHHHHHHhcCCCCCEEEEEcc
Confidence 45678888999999999999544
No 252
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=38.86 E-value=58 Score=25.92 Aligned_cols=24 Identities=21% Similarity=0.412 Sum_probs=19.9
Q ss_pred HHHHHHHhcccCCcceEEEEecCC
Q psy8151 55 EIGECFDSLSENEECRVIILSAAG 78 (220)
Q Consensus 55 ~l~~~l~~~~~d~~~rvvvl~g~G 78 (220)
...++|..+..||++++|++..-+
T Consensus 60 ~~~~~l~~~~~Dp~v~vIlvd~~~ 83 (153)
T PF00549_consen 60 TRNEALEIEAADPEVKVILVDIVG 83 (153)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEES
T ss_pred HHHHHHHHHhcCCCccEEEEEecc
Confidence 455788888899999999998765
No 253
>PF03464 eRF1_2: eRF1 domain 2; InterPro: IPR005141 This domain is found in the release factor eRF1 which terminates protein biosynthesis by recognizing stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known []. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site []. This domain is also found in other proteins which may also be involved in translation termination ; PDB: 3AGK_A 2VGN_A 2VGM_A 3J16_A 3IZQ 3IR9_A 3OBW_A 3MCA_B 2QI2_A 3E1Y_D ....
Probab=34.35 E-value=80 Score=24.06 Aligned_cols=29 Identities=21% Similarity=0.491 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhc--ccCCcceEEEEecCC
Q psy8151 50 HTMWLEIGECFDSL--SENEECRVIILSAAG 78 (220)
Q Consensus 50 ~~~~~~l~~~l~~~--~~d~~~rvvvl~g~G 78 (220)
...+.++.+.+.+. ...+.+++||+.|.|
T Consensus 53 ~~f~~~i~~~l~~~f~~~~~~~~~iIiaGPG 83 (133)
T PF03464_consen 53 EKFFKEIAEALKKYFLVNFDDVKCIIIAGPG 83 (133)
T ss_dssp HHHHHHHHHHHHHHCCCHTTTCSEEEEEEST
T ss_pred HHHHHHHHHHHHHHhhhccccccEEEEECCH
Confidence 36677788888887 777889999999987
No 254
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=33.46 E-value=9.8 Score=30.98 Aligned_cols=70 Identities=14% Similarity=0.144 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-cCcee
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-AGKIF 128 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~f 128 (220)
+.+...+.+.|+++++++ ++.|++. .-|.|+++.... ...+.+. ..++|+++- .|.+.
T Consensus 12 ~~~~~~l~~~l~~a~~~~-~~~ivl~----inspGG~v~~~~-------------~I~~~l~---~~~~pvva~V~g~Aa 70 (178)
T cd07021 12 PGLAAFVERALKEAKEEG-ADAVVLD----IDTPGGRVDSAL-------------EIVDLIL---NSPIPTIAYVNDRAA 70 (178)
T ss_pred HHHHHHHHHHHHHHHhCC-CCeEEEE----EECcCCCHHHHH-------------HHHHHHH---hCCCCEEEEECCchH
Confidence 677778899999998886 6666663 234444443221 1222222 677899888 99999
Q ss_pred eeecchhhhhhc
Q psy8151 129 TAGLDLSGMLSL 140 (220)
Q Consensus 129 g~G~dL~~~~d~ 140 (220)
++|.-+.+.||.
T Consensus 71 SaG~~ia~a~d~ 82 (178)
T cd07021 71 SAGALIALAADE 82 (178)
T ss_pred HHHHHHHHhCCe
Confidence 999999999984
No 255
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism]
Probab=33.28 E-value=53 Score=26.46 Aligned_cols=59 Identities=19% Similarity=0.066 Sum_probs=39.6
Q ss_pred CCCCCCcceEEEEee----cCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEec
Q psy8151 3 SFTPDTYKTLVVHVP----KQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSA 76 (220)
Q Consensus 3 ~~~~~~~~~~~~~~~----~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g 76 (220)
||+|.++.++.+-.+ =+.|.....++|.|.-.++ .+-..+|.+.. ...-++++++.+.|
T Consensus 10 SFDPiTnGHlDii~RA~~~Fd~viVaV~~np~K~plFs-------------leER~~l~~~~--~~~l~nV~V~~f~~ 72 (159)
T COG0669 10 SFDPITNGHLDIIKRASALFDEVIVAVAINPSKKPLFS-------------LEERVELIREA--TKHLPNVEVVGFSG 72 (159)
T ss_pred CCCCCccchHHHHHHHHHhccEEEEEEEeCCCcCCCcC-------------HHHHHHHHHHH--hcCCCceEEEeccc
Confidence 799999988754432 3567788888999988888 66555554433 33446666665543
No 256
>KOG0540|consensus
Probab=32.79 E-value=1.6e+02 Score=27.89 Aligned_cols=50 Identities=22% Similarity=0.291 Sum_probs=39.1
Q ss_pred HHHHHHHhhhcCCCcEEEeecCccccchhh---hhhhccEEEEeCCceEeccc
Q psy8151 163 TYQKSISSLERCPKPVISAVHGACIGGGMS---LITAADIRYATKDAWFTLKE 212 (220)
Q Consensus 163 ~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~---lal~cD~rva~~~a~f~~pe 212 (220)
.-.+++.......+|-|..|-|.+.||-.. .++.-|+.++.+.|++++-.
T Consensus 410 ~gAklv~a~a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~IavmG 462 (536)
T KOG0540|consen 410 HGAKLVYAVACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAVMG 462 (536)
T ss_pred hhhhhhhhhhhccCceEEEEecCccCCcccccccccCCceeEEcccceeeecc
Confidence 344566677778999999999999997654 55678999999998887643
No 257
>KOG1684|consensus
Probab=32.51 E-value=42 Score=30.72 Aligned_cols=33 Identities=18% Similarity=0.399 Sum_probs=25.1
Q ss_pred HHHhhhccccccceEEEEe-cCceeeeecchhhh
Q psy8151 105 ECFDSLSENEECRVIVLSA-AGKIFTAGLDLSGM 137 (220)
Q Consensus 105 ~~~~~~~~~~~~~~pvi~~-~G~~fg~G~dL~~~ 137 (220)
..+..++.....+++|+-+ .|++||+|.|++..
T Consensus 72 ~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ 105 (401)
T KOG1684|consen 72 PKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAV 105 (401)
T ss_pred HHHHhhccCCCceEEEEecCCCceeecCccHHHH
Confidence 3455566666777888888 68999999999853
No 258
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=28.97 E-value=49 Score=30.11 Aligned_cols=33 Identities=3% Similarity=0.157 Sum_probs=30.3
Q ss_pred CCCCcCCcCCCccchhhhchHHHHHHHHHHHHh
Q psy8151 30 DKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDS 62 (220)
Q Consensus 30 ~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 62 (220)
++.|...|.+.++||+.++...++.++...|+.
T Consensus 330 ~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~ 362 (388)
T PRK06366 330 ERFNVNGGAVAIGHPIGNSGSRIIVTLINALKT 362 (388)
T ss_pred CccCCCCchhhhCCCcCCCHHHHHHHHHHHHHh
Confidence 588999999999999999999999988888876
No 259
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=25.92 E-value=62 Score=26.71 Aligned_cols=70 Identities=19% Similarity=0.093 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-cCcee
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-AGKIF 128 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~G~~f 128 (220)
..+...+...|..++.++..+-|.+- .-|.|+|+.+-. ..++.+. ..+.++.+. .|.+.
T Consensus 42 ~~~~~~i~~~L~~l~~~~~~~~I~l~----InSpGG~v~~g~-------------~I~d~i~---~~~~~v~t~~~G~aa 101 (200)
T PRK00277 42 DHMANLIVAQLLFLEAEDPDKDIYLY----INSPGGSVTAGL-------------AIYDTMQ---FIKPDVSTICIGQAA 101 (200)
T ss_pred HHHHHHHHHHHHHhhccCCCCCEEEE----EECCCCcHHHHH-------------HHHHHHH---hcCCCEEEEEEeEec
Confidence 78888888888888765433333321 234444443211 1122222 334455555 78888
Q ss_pred eeecchhhhhh
Q psy8151 129 TAGLDLSGMLS 139 (220)
Q Consensus 129 g~G~dL~~~~d 139 (220)
+.|.-+.++.+
T Consensus 102 S~a~~I~~ag~ 112 (200)
T PRK00277 102 SMGAFLLAAGA 112 (200)
T ss_pred cHHHHHHhcCC
Confidence 88887777543
No 260
>PRK11778 putative inner membrane peptidase; Provisional
Probab=25.48 E-value=1.1e+02 Score=27.50 Aligned_cols=25 Identities=8% Similarity=0.093 Sum_probs=18.1
Q ss_pred ccceEEEEe-cCceeeeecchhhhhh
Q psy8151 115 ECRVIVLSA-AGKIFTAGLDLSGMLS 139 (220)
Q Consensus 115 ~~~~pvi~~-~G~~fg~G~dL~~~~d 139 (220)
+..+||++. .+.+.++|.-+++.+|
T Consensus 152 ~~~kpVva~v~~~AASggY~iAsaAD 177 (330)
T PRK11778 152 DAGIPLTVAVDKVAASGGYMMACVAD 177 (330)
T ss_pred hcCCCEEEEECCchhhHHHHHHHhCC
Confidence 456787776 6677788877777775
No 261
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=25.17 E-value=70 Score=29.54 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=33.6
Q ss_pred CCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccC
Q psy8151 29 PDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSEN 66 (220)
Q Consensus 29 p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d 66 (220)
+.+.|.-.|.+..+||++++...++.++.++|+.....
T Consensus 368 ~~pvN~~GG~la~GHP~GAtG~~~~~~l~~~l~~~~~~ 405 (426)
T PRK08170 368 RERLNVDGGAIALGHPVGASGARIVLHLLHALKRRGTK 405 (426)
T ss_pred cceecCCCCHHHhCCCccCccHHHHHHHHHHHHhhCCC
Confidence 35889999999999999999999999999999886543
No 262
>PF09863 DUF2090: Uncharacterized protein conserved in bacteria (DUF2090); InterPro: IPR018659 This domain, found in various prokaryotic carbohydrate kinases, has no known function.
Probab=24.75 E-value=95 Score=27.74 Aligned_cols=33 Identities=18% Similarity=0.476 Sum_probs=26.8
Q ss_pred hhhhchHHHHHHHHHHHHhcccCCcceEEEEecCC
Q psy8151 44 KLNAMNHTMWLEIGECFDSLSENEECRVIILSAAG 78 (220)
Q Consensus 44 ~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G 78 (220)
||-.++.+-|..+.+.+++ .||.+|.||+.|-+
T Consensus 214 KLep~s~~~W~~i~~~I~~--~Dp~crGvVvLGLd 246 (311)
T PF09863_consen 214 KLEPLSAAAWQAIEALIEE--RDPYCRGVVVLGLD 246 (311)
T ss_pred ccCCCCHHHHHHHHHHHHH--hCCCceeEEEecCC
Confidence 5555669999999888875 79999999998754
No 263
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=23.44 E-value=3.6e+02 Score=24.01 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhcccCC----cceEEEEecCCCceecCCCcccccccchhhhhhhhhHHHHhhhccccccceEEEEe-c
Q psy8151 50 HTMWLEIGECFDSLSENE----ECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDIGECFDSLSENEECRVIVLSA-A 124 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~----~~rvvvl~g~G~~FsaG~Dl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pvi~~-~ 124 (220)
......+..+++.+.++. -+.+|.|.-.|. .-+.+-. ..+..+.+.+..+...+.. +|+|+. .
T Consensus 86 ~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSGG-----aRlqEg~------~~L~~~a~i~~~~~~ls~~-VP~I~vv~ 153 (301)
T PRK07189 86 EVHGAKLAGALELAAEDNRNGIPTAVLLLFETGG-----VRLQEAN------AGLAAIAEIMRAIVDLRAA-VPVIGLIG 153 (301)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCCC-----cCccchH------HHHHHHHHHHHHHHHHhCC-CCEEEEEc
Confidence 666777778887776654 266777765443 2222110 1111222334333333344 888877 7
Q ss_pred Cc--eeeeecchhhhhhcc
Q psy8151 125 GK--IFTAGLDLSGMLSLG 141 (220)
Q Consensus 125 G~--~fg~G~dL~~~~d~~ 141 (220)
|+ |||++.-...+||..
T Consensus 154 G~~gc~GG~a~~a~l~D~i 172 (301)
T PRK07189 154 GRVGCFGGMGIAAALCSYL 172 (301)
T ss_pred CCCCCcHHHHHHHhcCCEE
Confidence 77 999998888888854
No 264
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=23.38 E-value=68 Score=29.53 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=30.4
Q ss_pred CCCCCcCCcCCCccchhhhchHHHHHHHHHHHHh
Q psy8151 29 PDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDS 62 (220)
Q Consensus 29 p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 62 (220)
+++.|.-.|.+.++||++++...++.++...|++
T Consensus 344 ~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~ 377 (402)
T PRK08242 344 HDKVNVNGGAIAMGHPLGATGAMILGTVLDELER 377 (402)
T ss_pred CcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999988888875
No 265
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=23.11 E-value=2.6e+02 Score=24.08 Aligned_cols=53 Identities=9% Similarity=0.182 Sum_probs=39.4
Q ss_pred CCcceEEEEeecCcEEEEEEcCCCCCCcCCcCCCccchhhhchHHHHHHHHHHHHhcccCCcceEEEEecCCC
Q psy8151 7 DTYKTLVVHVPKQFVVHVELNRPDKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDSLSENEECRVIILSAAGK 79 (220)
Q Consensus 7 ~~~~~~~~~~~~~~v~~i~ln~p~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~d~~~rvvvl~g~G~ 79 (220)
+.|+.+.+.. .|.++ .+++.+-+| .+.+..+.+.+.++... ++++.|+.|.|.
T Consensus 3 ~~~~rillkL-sGe~l-----~g~~~~gid-------------~~~i~~~a~~i~~~~~~-g~eV~iVvGGGn 55 (238)
T COG0528 3 PKYMRILLKL-SGEAL-----AGEQGFGID-------------PEVLDRIANEIKELVDL-GVEVAVVVGGGN 55 (238)
T ss_pred cceEEEEEEe-eccee-----cCCCCCCCC-------------HHHHHHHHHHHHHHHhc-CcEEEEEECCCH
Confidence 4466666665 44443 354447788 99999999999999866 789989999884
No 266
>PRK03094 hypothetical protein; Provisional
Probab=22.90 E-value=1.1e+02 Score=21.84 Aligned_cols=21 Identities=10% Similarity=0.205 Sum_probs=15.9
Q ss_pred CcceEEEEecCCCceecCCCc
Q psy8151 67 EECRVIILSAAGKIFTAGLDL 87 (220)
Q Consensus 67 ~~~rvvvl~g~G~~FsaG~Dl 87 (220)
..+.|+|++|....|..-.|.
T Consensus 34 ~~~Da~VitG~d~n~mgi~d~ 54 (80)
T PRK03094 34 QGCDCCVVTGQDSNVMGIADT 54 (80)
T ss_pred CCcCEEEEeCCCcceeccccc
Confidence 568899999988777765444
No 267
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.84 E-value=1e+02 Score=26.04 Aligned_cols=38 Identities=32% Similarity=0.634 Sum_probs=26.4
Q ss_pred HHHHHHHHhhhcCC--CcEEEeecCccccchhhhhhhccE
Q psy8151 162 TTYQKSISSLERCP--KPVISAVHGACIGGGMSLITAADI 199 (220)
Q Consensus 162 ~~~~~~~~~l~~~~--kp~Iaav~G~a~GgG~~lal~cD~ 199 (220)
......+..|.+.+ .+.=..+-|.|+||++.+..++..
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 33444455555555 333356779999999999999887
No 268
>COG3892 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.45 E-value=3.9e+02 Score=23.56 Aligned_cols=26 Identities=23% Similarity=0.571 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhcccCCcceEEEEecC
Q psy8151 50 HTMWLEIGECFDSLSENEECRVIILSAA 77 (220)
Q Consensus 50 ~~~~~~l~~~l~~~~~d~~~rvvvl~g~ 77 (220)
.+-|.++..++.+ +||.||.||+.|-
T Consensus 212 ~~aW~~i~~~I~~--~DP~cRGiViLGL 237 (310)
T COG3892 212 PDAWAEIEAAIER--RDPHCRGIVILGL 237 (310)
T ss_pred hHHHHHHHHHHHh--cCcccceeEEecc
Confidence 7888888888865 7999999999874
No 269
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=20.86 E-value=74 Score=29.12 Aligned_cols=33 Identities=12% Similarity=0.160 Sum_probs=30.5
Q ss_pred CCCCcCCcCCCccchhhhchHHHHHHHHHHHHh
Q psy8151 30 DKLNAMNHTMWLPDKLNAMNHTMWLEIGECFDS 62 (220)
Q Consensus 30 ~~~Na~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 62 (220)
.+.|.-.|.+.++||++++...++.++...|+.
T Consensus 330 ~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~ 362 (392)
T COG0183 330 LPVNPSGGAIALGHPIGATGARILVELARQLRG 362 (392)
T ss_pred ceeCCCcchhhcCCCccchHHHHHHHHHHHHhh
Confidence 678999999999999999999999999888887
No 270
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=20.35 E-value=1.2e+02 Score=24.45 Aligned_cols=41 Identities=29% Similarity=0.458 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhhhcCC--CcEEEeecCccccchhhhhhhccE
Q psy8151 159 KLITTYQKSISSLERCP--KPVISAVHGACIGGGMSLITAADI 199 (220)
Q Consensus 159 ~~~~~~~~~~~~l~~~~--kp~Iaav~G~a~GgG~~lal~cD~ 199 (220)
.....+...+..+...+ .+--..+=|+|.||.+.+.+++..
T Consensus 77 ~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~ 119 (218)
T PF01738_consen 77 QVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD 119 (218)
T ss_dssp HHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc
Confidence 33444556677777777 345566779999999999888764
Done!