BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8152
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6RFH5|WDR74_HUMAN WD repeat-containing protein 74 OS=Homo sapiens GN=WDR74 PE=1 SV=1
Length = 385
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 183/338 (54%), Gaps = 19/338 (5%)
Query: 8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
++++G+ TG KGVNL + + N + +V AL WG E+++L+ + + +
Sbjct: 10 HVWVGTETGILKGVNLQRKQA--ANFTAGGQPRREEAVSALCWGTGGETQMLVGCADRTV 67
Query: 68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK---TEPDQWTNF 124
K + T+ F GEG G+++ D ++T V SG +++W K T D
Sbjct: 68 KHFSTEDGIFQGQRHCPGGEGMFRGLAQADGTLITCVDSGILRVWHDKDKDTSSDPLLEL 127
Query: 125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
VGP + M+ + H +++ATGGKEN LK+WDL ++ +F AKNV + D
Sbjct: 128 RVGPGVCRMRQDPAHPHVVATGGKENALKIWDLQGSEEPVFRAKNVRN---------DWL 178
Query: 183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
DLR P+W I FLP S K+ C+ VRVYDP + QRRPVL+ + L+ +T T
Sbjct: 179 DLRVPIWDQDIQFLPGSQKLVTCTGYHQVRVYDPA-SPQRRPVLETTYGEYPLTAMTLTP 237
Query: 243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
+ VIVG+T G + +DLR +G+ KG AG V+ + C ++ L+ S LDR R+H
Sbjct: 238 GGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296
Query: 303 DFHSKKLL-RKDYMQSRLTSILVRSDFSLENETKKEEQ 339
+ + L K Y++S+L +L+ + E+E ++ ++
Sbjct: 297 RIQNPRGLEHKVYLKSQLNCLLLSGRDNWEDEPQEPQE 334
>sp|Q58D06|WDR74_BOVIN WD repeat-containing protein 74 OS=Bos taurus GN=WDR74 PE=2 SV=1
Length = 385
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 187/353 (52%), Gaps = 21/353 (5%)
Query: 8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
++++G+ TG KGVNL + + N + +V AL WG E+++L+ + +
Sbjct: 10 HVWVGTDTGILKGVNLQRKQA--ANFTASGQPRREEAVSALCWGAGGETQILVGCADGTV 67
Query: 68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK---TEPDQWTNF 124
K + T+ F GEG G+++ D ++T V SG +++W K D
Sbjct: 68 KHFSTEEGRFQGQRQCPGGEGTFRGLAQVDGTLITCVDSGILRVWTDKDKEASSDPVLEL 127
Query: 125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
VGP + M+ + +I+ATGGKEN LK+WDL ++ +F AKNV + D
Sbjct: 128 RVGPGVCRMRQDPARPHIVATGGKENALKVWDLQGSEEPLFRAKNVRN---------DWL 178
Query: 183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
DLR PVW I FLP S K+ C+ VRVYDP + QRRPVL+ + L+ +T T
Sbjct: 179 DLRVPVWDQDIQFLPESQKLVTCTGYHQVRVYDPA-SPQRRPVLEATYGEYPLTAVTLTP 237
Query: 243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
+ + VIVG+T G + +DLR +G+ KG AG V+ + C ++ L+ S LDR R+H
Sbjct: 238 EGNSVIVGNTHGQLAEIDLR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296
Query: 303 DFHSKKLL-RKDYMQSRLTSILV--RSDFSLENETKKEEQEHSEEKGDSDEKY 352
+ + L K Y++S+L +L+ R ++ E + +E + E ++DE +
Sbjct: 297 RIRNPRGLEHKVYLKSQLNCLLLSGRDNWEDEPQEPQEPNKVPSEDTETDELW 349
>sp|Q8VCG3|WDR74_MOUSE WD repeat-containing protein 74 OS=Mus musculus GN=Wdr74 PE=2 SV=1
Length = 384
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 188/353 (53%), Gaps = 21/353 (5%)
Query: 8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI 67
++++G+ TG KGVNL + N + +V AL WG E+++L+ + + +
Sbjct: 10 HVWVGTETGILKGVNLQRKH--AANFTPSGQPRREEAVNALCWGTGGETQILVGCADRTV 67
Query: 68 KIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWR---YKTEPDQWTNF 124
+ ++ + F + GEG G+++ D ++T V SG +++W + D
Sbjct: 68 RYFNAEEGTFLSQRYCPGGEGTFRGLAQADGTLITCVDSGILRVWCENDKEASSDPLLEL 127
Query: 125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKN-IFSAKNVSHRVLVYSVKPDEF 182
VGP + M+ + H++++AT GKEN LK+WDL ++ +F AKNV + D
Sbjct: 128 KVGPGVCRMRQDPTHTHVVATCGKENALKVWDLQGSEEPVFRAKNVRN---------DWL 178
Query: 183 DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242
DLR P+W FLP S K+ C+ VRVYDP ++ QRRPVL+ + L+ +T T
Sbjct: 179 DLRVPIWDQDTQFLPGSQKLVTCTGYHQVRVYDP-VSPQRRPVLEATYGEYPLTAMTLTP 237
Query: 243 QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVH 302
+ + VIVG+T G + +D R +G+ KG AG V+ + C ++ L+ S LDR R+H
Sbjct: 238 EGNSVIVGNTHGQLAEIDFR-QGRLLGCLKGLAGSVRGLQCHPSKPLLASCGLDRVLRIH 296
Query: 303 DFHSKKLL-RKDYMQSRLTSILV--RSDFSLENETKKEEQEHSEEKGDSDEKY 352
+ + L K Y++S+L +L+ R ++ E + +E + E ++DE +
Sbjct: 297 RIRNPRGLEHKVYLKSQLNCLLLSGRDNWEDEPQEPQEPNQVPSEDTETDELW 349
>sp|Q54FW9|Y0555_DICDI WD repeat-containing protein DDB_G0290555 OS=Dictyostelium
discoideum GN=DDB_G0290555 PE=4 SV=1
Length = 508
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 107/225 (47%), Gaps = 18/225 (8%)
Query: 120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKP 179
Q + NV L N ++ A GGK+ +L +WDL +SAK K
Sbjct: 154 QSFSLNVATNLSGFAMNPSNDKFAFGGKDVNLTIWDLEKQVKTYSAK----------FKH 203
Query: 180 DEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT 239
D +L+ PV +N + ++ N DK+ + S ++ YD + T R L V + I
Sbjct: 204 DFLNLQEPVSINVVKYM-NDDKILIGS-DFRIKAYDLRSKTNRSSFLDVSFSKHPIQSIQ 261
Query: 240 TTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRH 298
TNQ HY + G + D+R + +K AG VKDIA L+ +V LDRH
Sbjct: 262 YTNQKEHYFYASDSIGKVFCYDVRT-SRQVGSFKDSAGSVKDIAIHPTLPLLATVGLDRH 320
Query: 299 FRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSE 343
RV++ ++K+L K +++ RL+ +L FS E T + QE E
Sbjct: 321 LRVYNLDNRKMLHKIFLKQRLSCVL----FSKEEPTNEIAQEEEE 361
>sp|A5DKC4|NSA1_PICGU Ribosome biogenesis protein NSA1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=NSA1 PE=3 SV=2
Length = 398
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 46/220 (20%)
Query: 138 HSNIIATGGKENDLKLWD----------LNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP 187
+ A GGKENDL++ L + + +F+AKNV K D DLR P
Sbjct: 152 QPGVFAYGGKENDLRIVKMFEVGKKVKLLESVEVLFAAKNV---------KNDHLDLRVP 202
Query: 188 VWVNGISFLP--NSDKVAVCSKQGYVRVYD------PKITTQ--RRPVLKVDIPD----- 232
+W+ I F+ NS K+ ++ G +R+YD P Q P++ ++
Sbjct: 203 IWITKIRFISSKNSYKLITATRYGQLRIYDTNHGRKPAHDYQVCTNPIITLNFAGSNSDE 262
Query: 233 ---------VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC 283
VA + + ++ + +T GD++ R GK Y+ G G + ++C
Sbjct: 263 VIITDNRNMVARHSLVSIDKKAFKTNSATVGDIIKPVPRLLGK--YQEGGNTGAIFGVSC 320
Query: 284 PLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSIL 323
+ + + LDR+ RV+D +++++ K YM S++ IL
Sbjct: 321 -FKDTFVATGGLDRYLRVYDLETREMVSKVYMGSQIADIL 359
>sp|Q6CEC9|NSA1_YARLI Ribosome biogenesis protein NSA1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=NSA1 PE=3 SV=1
Length = 410
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 51/256 (19%)
Query: 127 GPQLECMKHNK--HSNIIATGGKENDLKLW------DLNTTKNIFSAKNVSHRVLVYSVK 178
GP L C ++ + IA GGKE DL+++ D T ++ F A+NV K
Sbjct: 142 GP-LACFALDRELYPGKIAVGGKERDLEVFGWAVKGDEVTVRSEFQARNV---------K 191
Query: 179 PDEFDLRRPVWVNGISFLPNSDK----VAVCSKQGYVRVYD------PK--ITTQRRPVL 226
+E D+R PVW++GI F SDK V ++ G +RVY+ PK + P L
Sbjct: 192 SNEIDMRVPVWISGILF-QASDKDGFRVITATRHGQIRVYETWHGKRPKWDFKVTKDP-L 249
Query: 227 KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK----------GKPCY--KYKGF 274
+ P + S + +++ +H D + L+ K PC K+ G
Sbjct: 250 RTLAPGMDASNVVSSD-AHSSTFKFNFADNEKIVLKNKDNNQNKEHNRKSPCVVEKFPGS 308
Query: 275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENET 334
G V + N L+ +V LDR+ R+ D + + K ++ ++++S+L ++ E
Sbjct: 309 LGAVLHLVTTDN-GLLATVGLDRYLRIFDLETTECTAKMFVGTQVSSLLF-----VDTER 362
Query: 335 KKEEQEHSEEKGDSDE 350
K +++H EE + ++
Sbjct: 363 KTAQEKHVEETAEKED 378
>sp|A5DX41|NSA1_LODEL Ribosome biogenesis protein NSA1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=NSA1 PE=3 SV=1
Length = 447
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 54/230 (23%)
Query: 135 HNKHSNIIATGGKENDLKLWDL-NTTKN----------------IFSAKNVSHRVLVYSV 177
H + N++A GGKE DL++ +L N++ N +F AKNVS+
Sbjct: 193 HPEQENVVAFGGKETDLQIAELYNSSVNSKIFKKDYKSAFVPKILFKAKNVSN------- 245
Query: 178 KPDEFDLRRPVWVNGISFLPNSD-----KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD 232
D +LR P+W+ I F N+ K+ ++ G +R+YD K R+PV +
Sbjct: 246 --DHLNLRVPIWITNILFFTNNVTNGQYKLITSTRYGQLRIYDTK--HGRKPVKDYPVST 301
Query: 233 VALSCITTTNQSHYVIVGSTTGDMMA------VD--------------LRGKGKPCYKYK 272
+ + N +V + T ++MA +D ++ K KY
Sbjct: 302 TPILTLLFGNDKETEVVLTDTQNLMAKYSLDIIDDKAFKTNSASAGDIIKPVPKLLGKYT 361
Query: 273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSI 322
G +A + E ++ LDR+ RV D S+++L K Y+ ++S+
Sbjct: 362 G-GNTGATLAQQVYEGIVAFAGLDRYLRVFDVESRQILAKVYLGVEVSSL 410
>sp|O94698|NSA1_SCHPO Ribosome biogenesis protein nsa1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nsa1 PE=3 SV=1
Length = 387
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 89/220 (40%), Gaps = 28/220 (12%)
Query: 127 GPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-------KNIFSAKNVSHRVLVYSVKP 179
GP H + IIA GGKEND+ L+ N T ++ +NV +VK
Sbjct: 128 GPLSAVELHPRIPGIIAAGGKENDVCLYSCNPTCKSNIDELELWRTENVVKVFQGKNVKN 187
Query: 180 DEFDLRRPVWVNGISFLPNSDKV---------------AVCSKQGYVRVYDPKITTQRRP 224
D +LR VW+ GI F + V A + G +R YD K RRP
Sbjct: 188 DSLNLRVRVWITGIVFTEDIINVIDGKSEDDESLCFHFATITHYGQLRFYDTK--HGRRP 245
Query: 225 VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP 284
V D+ LS + + + D K K +++G G I C
Sbjct: 246 VSTFDVSTSPLSHVGLLPSIKLLYFADKRAQISIFD-HSKKKVIGRFQGVKGAPSSIHCL 304
Query: 285 LNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILV 324
N++ LDR+ R+ D +K L Y+++ TSI+V
Sbjct: 305 --GNVVAITGLDRNVRIFD-ADRKPLANAYIKALPTSIIV 341
>sp|Q5A2T0|NSA1_CANAL Ribosome biogenesis protein NSA1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=NSA1 PE=3 SV=1
Length = 406
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 40/231 (17%)
Query: 124 FNVGPQLECMKHNKHSNIIATGGKENDLKLWDL---NTTKNIFSAKNVSHRV---LVY-- 175
F + PQ E NI+A GGKE+DL++ L N +F N + +++
Sbjct: 148 FAINPQAE--------NIVALGGKEHDLQILQLFNKNINSTVFKKNNYENEFKPQIIFKA 199
Query: 176 -SVKPDEFDLRRPVWVNGISFLPNSD--KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD 232
+V+ D +LR P+W+ I F + K+ ++ G +R+YD R+P + +
Sbjct: 200 KNVRNDHLELRVPIWITNILFAKAAKGYKLVTSTRYGQIRLYDT--AEGRKPRKDYKVTE 257
Query: 233 VALSCITTTNQSHYVIVGSTTGDMMA------VDLRGKG----------KPCYKYKG-FA 275
+ +T N I+ + T ++A VD + KP K G F
Sbjct: 258 KPIVTLTFANDEQTEIIVTDTHSLIAKYSLTQVDEKAFKTISASAGEIVKPVPKLLGKFT 317
Query: 276 G--CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILV 324
G E ++ LDR+ RV D S+++L K Y+ ++++L+
Sbjct: 318 GGNTGATFGVHAYERIVAFAGLDRYLRVFDLESREILAKVYLGVEVSALLI 368
>sp|Q6BUJ2|NSA1_DEBHA Ribosome biogenesis protein NSA1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=NSA1 PE=3 SV=1
Length = 430
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 130 LECMKHNKH-SNIIATGGKEND---LKLWDLNTTKNIFSAKNVSHRV---LVYS---VKP 179
+ +N H + + A GGKEND ++L++ TK++F A+N ++++ VK
Sbjct: 142 ISAFINNPHEAGVFACGGKENDARIIRLFEGEITKDVFEAENKQEFFQPDVIFTARNVKN 201
Query: 180 DEFDLRRPVWVNGISFLPNSD----KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVAL 235
D DLR P+W++ I F K ++ G VR+YD T +RP+ + + +
Sbjct: 202 DHLDLRPPIWISSILFFEEKPKDGYKFLTSTRYGQVRIYDT--THGKRPIQDYKVCEKPI 259
Query: 236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK-YKGFAGCVKDIACPL--------N 286
+ + VIV T + L +K + AG + L N
Sbjct: 260 VTLNFADSEEEVIVSDTHNLVAKYSLAQIDSKAFKTHSASAGEITKPVSKLLGKFSAGGN 319
Query: 287 ENLILSVS-----------LDRHFRVHDFHSKKLLRKDYMQSRLTSILV 324
I+ V+ LDR+ R +D S+++L K Y+ +++ +L+
Sbjct: 320 TGAIVGVNIFDDEIISTGGLDRYLRTYDISSREILAKVYLGVQISDVLM 368
>sp|A3LVX0|NSA1_PICST Ribosome biogenesis protein NSA1 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=NSA1 PE=3 SV=2
Length = 430
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 131 ECMKHNKHSNIIATGGKENDL---KLWDLNTTKNIFSAKNVSHRV---LVYS---VKPDE 181
E K+ I GG+END+ KL++ + T IF +NV + +V++ VK D
Sbjct: 152 EFSKNPSVEGIFGYGGEENDVRIVKLYESDITSEIFDTENVENNFKSEVVFTAKNVKNDH 211
Query: 182 FDLRRPVWVNGISFLPNSD----KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC 237
DLR PVW+ I F K + G +RVYD RRPV + +
Sbjct: 212 LDLRVPVWITKIRFFTEQPEKGYKFITATHYGQIRVYDT--NHGRRPVRDFTVCQKPILT 269
Query: 238 ITTTNQSHYVIVGSTTGDMMAVD--LRGKGKPCYKYKGFAG-CVKDIA------------ 282
+T N+ ++ S + +++A ++ K + AG +K +A
Sbjct: 270 LTFANEEESEVIISDSHNLIAKHSLIQVDDKASKTHSASAGDIIKPVAKLLGRFVDQFGA 329
Query: 283 ---CPLNENLILSVSLDRHFRVHDFHSKKLLRK 312
+ E L+++ LDR+ RV D S++++ K
Sbjct: 330 TYGVEVGEGLLVTGGLDRYLRVFDLASREIVAK 362
>sp|Q1HPW4|EIF3I_BOMMO Eukaryotic translation initiation factor 3 subunit I OS=Bombyx mori
PE=2 SV=1
Length = 329
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 20/228 (8%)
Query: 95 RYDECILTAVKSGDVKLWRYKTEPDQWTNFNV-GPQLECMKHNKHSNIIATGGKENDLKL 153
R + + +A K +W + ++ FN G + C+ + S + TGG ++ +L
Sbjct: 20 REGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRL 78
Query: 154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYV-- 211
WDL T KNI + K+ S SV+ F + +DK + +V
Sbjct: 79 WDLETGKNIATLKSNS------SVRTCNFSY------SAYQAAYTTDKAMGHPCEVFVID 126
Query: 212 -RVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK 270
R D ++ Q P+LK +I D ++ + + +I G GD++ DLR GK +
Sbjct: 127 TRTIDETVSGQ-APILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLR-TGKKIHS 184
Query: 271 YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSR 318
K + D+ + + ++ S D ++ D +S +LL K+Y R
Sbjct: 185 VKEHTHQITDMQLSRDGTMFVTASKDHTAKLFDTNSLELL-KEYKTER 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,235,722
Number of Sequences: 539616
Number of extensions: 8409910
Number of successful extensions: 136945
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1847
Number of HSP's successfully gapped in prelim test: 1997
Number of HSP's that attempted gapping in prelim test: 56203
Number of HSP's gapped (non-prelim): 35807
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)