Query psy8152
Match_columns 444
No_of_seqs 808 out of 3177
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 19:57:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8152.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8152hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.4E-48 4.8E-53 353.9 36.0 284 40-354 30-319 (321)
2 1vyh_C Platelet-activating fac 100.0 1.6E-48 5.5E-53 365.9 35.5 281 40-354 106-409 (410)
3 3ow8_A WD repeat-containing pr 100.0 6.4E-47 2.2E-51 343.0 37.4 274 5-305 47-320 (321)
4 1nr0_A Actin interacting prote 100.0 6.9E-47 2.4E-51 372.9 38.3 330 6-354 160-609 (611)
5 1got_B GT-beta; complex (GTP-b 100.0 2.6E-46 9E-51 342.2 38.6 279 40-353 53-340 (340)
6 2ynn_A Coatomer subunit beta'; 100.0 2.8E-46 9.6E-51 336.5 37.3 283 40-355 11-301 (304)
7 1vyh_C Platelet-activating fac 100.0 3.3E-46 1.1E-50 350.2 35.8 271 4-305 118-410 (410)
8 4g56_B MGC81050 protein; prote 100.0 5.4E-46 1.9E-50 342.0 33.3 307 8-356 18-343 (357)
9 2pbi_B Guanine nucleotide-bind 100.0 3.9E-45 1.3E-49 336.0 38.9 282 40-353 62-354 (354)
10 4gqb_B Methylosome protein 50; 100.0 2E-45 6.7E-50 335.7 35.1 286 40-358 28-333 (344)
11 1nr0_A Actin interacting prote 100.0 5.5E-45 1.9E-49 359.4 39.3 313 4-358 28-399 (611)
12 3iz6_a 40S ribosomal protein R 100.0 1E-45 3.5E-50 343.5 31.7 292 40-357 64-376 (380)
13 1erj_A Transcriptional repress 100.0 1.2E-44 4.3E-49 337.8 37.1 311 17-356 41-389 (393)
14 2ymu_A WD-40 repeat protein; u 100.0 2.5E-44 8.6E-49 353.2 40.4 303 4-353 272-577 (577)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 9E-45 3.1E-49 332.6 34.2 293 40-360 13-339 (345)
16 1got_B GT-beta; complex (GTP-b 100.0 5.2E-44 1.8E-48 327.0 37.4 271 4-303 65-340 (340)
17 3frx_A Guanine nucleotide-bind 100.0 2.7E-44 9.3E-49 325.8 35.1 281 40-356 15-317 (319)
18 2pm9_A Protein WEB1, protein t 100.0 1.8E-44 6.1E-49 339.6 31.5 319 6-356 25-414 (416)
19 2hes_X YDR267CP; beta-propelle 100.0 6.2E-44 2.1E-48 325.0 33.9 286 40-356 12-328 (330)
20 4gqb_B Methylosome protein 50; 100.0 4E-44 1.4E-48 327.1 32.4 282 4-309 40-334 (344)
21 4ery_A WD repeat-containing pr 100.0 2.6E-43 9E-48 318.6 34.7 282 40-355 21-311 (312)
22 2pbi_B Guanine nucleotide-bind 100.0 8.3E-43 2.8E-47 320.6 37.5 271 4-303 74-354 (354)
23 2xzm_R RACK1; ribosome, transl 100.0 3.4E-43 1.2E-47 322.0 34.9 284 40-357 19-341 (343)
24 4g56_B MGC81050 protein; prote 100.0 1.6E-43 5.4E-48 325.6 31.7 280 3-307 51-344 (357)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.6E-43 2.6E-47 319.8 35.9 286 4-312 26-341 (345)
26 2ymu_A WD-40 repeat protein; u 100.0 1.9E-42 6.6E-47 339.8 40.4 306 4-356 231-539 (577)
27 1r5m_A SIR4-interacting protei 100.0 8.4E-43 2.9E-47 328.8 35.5 314 5-355 56-424 (425)
28 3frx_A Guanine nucleotide-bind 100.0 1.4E-42 4.6E-47 314.6 35.4 274 4-307 28-318 (319)
29 2ynn_A Coatomer subunit beta'; 100.0 2.7E-42 9.3E-47 310.5 35.9 272 4-306 23-302 (304)
30 1gxr_A ESG1, transducin-like e 100.0 1.9E-42 6.6E-47 316.1 35.3 310 4-354 19-335 (337)
31 2xzm_R RACK1; ribosome, transl 100.0 5.1E-42 1.8E-46 314.2 36.7 276 5-307 38-341 (343)
32 3iz6_a 40S ribosomal protein R 100.0 8E-43 2.7E-47 324.1 31.2 276 4-308 76-377 (380)
33 4ery_A WD repeat-containing pr 100.0 3.4E-41 1.2E-45 304.8 37.2 272 4-305 33-311 (312)
34 2hes_X YDR267CP; beta-propelle 100.0 1.8E-41 6.3E-46 308.7 34.1 272 7-306 25-328 (330)
35 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7.8E-41 2.7E-45 317.7 39.6 302 5-356 128-442 (445)
36 4aow_A Guanine nucleotide-bind 100.0 7E-41 2.4E-45 306.3 36.0 286 40-358 36-339 (340)
37 1erj_A Transcriptional repress 100.0 5.9E-41 2E-45 312.9 35.4 285 4-306 74-389 (393)
38 1sq9_A Antiviral protein SKI8; 100.0 3E-41 1E-45 315.6 33.0 297 40-357 14-396 (397)
39 3vl1_A 26S proteasome regulato 100.0 1E-40 3.4E-45 314.5 34.5 333 4-356 66-419 (420)
40 4aez_A CDC20, WD repeat-contai 100.0 2.6E-40 8.9E-45 309.6 36.4 278 6-314 103-388 (401)
41 3zwl_B Eukaryotic translation 100.0 4.4E-40 1.5E-44 304.2 36.5 297 39-359 29-349 (369)
42 4aow_A Guanine nucleotide-bind 100.0 6.4E-40 2.2E-44 299.9 37.0 279 3-308 48-339 (340)
43 3dm0_A Maltose-binding peripla 100.0 1.1E-40 3.9E-45 333.8 34.8 286 40-355 380-692 (694)
44 3sfz_A APAF-1, apoptotic pepti 100.0 2.6E-40 9E-45 352.3 39.3 336 4-362 625-1080(1249)
45 2j04_B YDR362CP, TAU91; beta p 100.0 1.9E-41 6.5E-46 324.5 25.6 318 7-356 174-517 (524)
46 3ei3_B DNA damage-binding prot 100.0 2.2E-40 7.5E-45 308.3 32.1 282 40-356 71-382 (383)
47 3v7d_B Cell division control p 100.0 1.3E-39 4.5E-44 311.0 37.6 300 5-352 131-459 (464)
48 1sq9_A Antiviral protein SKI8; 100.0 3.4E-40 1.2E-44 308.5 32.6 274 7-308 27-397 (397)
49 4gga_A P55CDC, cell division c 100.0 1.9E-39 6.4E-44 305.7 37.7 276 6-312 116-401 (420)
50 1gxr_A ESG1, transducin-like e 100.0 3.8E-39 1.3E-43 294.2 38.6 273 4-304 61-335 (337)
51 4e54_B DNA damage-binding prot 100.0 5.6E-41 1.9E-45 317.5 26.9 290 40-359 117-433 (435)
52 3k26_A Polycomb protein EED; W 100.0 8.1E-41 2.8E-45 308.9 27.3 283 40-355 16-365 (366)
53 3vl1_A 26S proteasome regulato 100.0 1E-40 3.5E-45 314.4 28.5 281 43-357 57-366 (420)
54 1k8k_C P40, ARP2/3 complex 41 100.0 9.8E-41 3.4E-45 309.2 27.5 288 40-358 6-363 (372)
55 2oaj_A Protein SNI1; WD40 repe 100.0 4.9E-40 1.7E-44 335.6 34.8 337 6-360 69-668 (902)
56 1r5m_A SIR4-interacting protei 100.0 6.7E-40 2.3E-44 308.9 32.7 318 15-358 24-363 (425)
57 3odt_A Protein DOA1; ubiquitin 100.0 6.5E-39 2.2E-43 289.6 37.5 278 40-361 16-301 (313)
58 3k26_A Polycomb protein EED; W 100.0 6.2E-40 2.1E-44 303.0 31.3 288 5-306 33-366 (366)
59 3i2n_A WD repeat-containing pr 100.0 1E-39 3.5E-44 300.6 32.4 275 4-309 29-356 (357)
60 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-39 4E-44 332.8 34.8 327 4-359 27-608 (902)
61 3dwl_C Actin-related protein 2 100.0 1.3E-41 4.4E-46 315.9 18.4 286 40-354 9-377 (377)
62 3odt_A Protein DOA1; ubiquitin 100.0 6.6E-39 2.3E-43 289.6 35.6 277 4-318 27-308 (313)
63 1pgu_A Actin interacting prote 100.0 3.9E-39 1.3E-43 318.5 37.2 325 7-356 174-614 (615)
64 4h5i_A Guanine nucleotide-exch 100.0 1.4E-39 4.6E-44 300.2 31.5 281 42-356 14-343 (365)
65 4e54_B DNA damage-binding prot 100.0 3.9E-40 1.3E-44 311.7 27.8 281 2-310 128-434 (435)
66 2pm9_A Protein WEB1, protein t 100.0 3E-40 1E-44 310.8 26.9 290 40-360 10-341 (416)
67 3zwl_B Eukaryotic translation 100.0 1.1E-38 3.7E-43 294.9 36.4 274 4-310 42-350 (369)
68 2pm7_B Protein transport prote 100.0 9.3E-39 3.2E-43 286.4 34.6 244 40-306 7-285 (297)
69 1k8k_C P40, ARP2/3 complex 41 100.0 5.8E-39 2E-43 297.3 33.2 279 4-309 18-364 (372)
70 3dm0_A Maltose-binding peripla 100.0 6.4E-39 2.2E-43 321.1 35.8 274 3-305 392-692 (694)
71 3gre_A Serine/threonine-protei 100.0 6.5E-40 2.2E-44 310.7 26.9 283 40-353 61-437 (437)
72 3ei3_B DNA damage-binding prot 100.0 7.9E-39 2.7E-43 297.8 33.7 268 7-306 87-382 (383)
73 4ggc_A P55CDC, cell division c 100.0 2.4E-38 8.2E-43 286.6 36.0 272 6-308 36-317 (318)
74 3i2n_A WD repeat-containing pr 100.0 1.8E-39 6E-44 299.0 28.7 288 40-357 16-354 (357)
75 3sfz_A APAF-1, apoptotic pepti 100.0 4.7E-38 1.6E-42 335.0 39.3 337 4-363 667-1123(1249)
76 1p22_A F-BOX/WD-repeat protein 100.0 3.1E-38 1.1E-42 298.8 32.8 279 5-324 142-432 (435)
77 1p22_A F-BOX/WD-repeat protein 100.0 4.4E-38 1.5E-42 297.8 33.3 275 40-360 131-418 (435)
78 3bg1_A Protein SEC13 homolog; 100.0 6.5E-39 2.2E-43 290.0 26.4 247 40-306 11-293 (316)
79 3mkq_A Coatomer beta'-subunit; 100.0 6.7E-38 2.3E-42 319.9 36.7 286 40-358 11-304 (814)
80 4aez_A CDC20, WD repeat-contai 100.0 1.2E-37 4.2E-42 291.5 35.0 284 40-361 89-385 (401)
81 3v7d_B Cell division control p 100.0 1.3E-37 4.3E-42 297.3 35.3 298 40-361 119-426 (464)
82 3mkq_A Coatomer beta'-subunit; 100.0 8.4E-38 2.9E-42 319.2 35.9 273 4-306 23-302 (814)
83 1pgu_A Actin interacting prote 100.0 1.7E-37 5.8E-42 306.8 36.3 292 4-324 28-347 (615)
84 4gga_A P55CDC, cell division c 100.0 2.1E-37 7E-42 291.7 35.2 282 44-359 107-398 (420)
85 4a11_B DNA excision repair pro 100.0 1.1E-37 3.9E-42 292.1 33.3 330 5-355 55-404 (408)
86 3gre_A Serine/threonine-protei 100.0 2.6E-38 9E-43 299.6 27.9 271 5-303 75-437 (437)
87 1yfq_A Cell cycle arrest prote 100.0 1.3E-37 4.6E-42 284.8 31.6 276 40-354 9-322 (342)
88 3dwl_C Actin-related protein 2 100.0 1.2E-38 3.9E-43 296.0 24.6 273 4-304 21-377 (377)
89 3dw8_B Serine/threonine-protei 100.0 5.5E-38 1.9E-42 298.2 29.7 278 40-353 26-443 (447)
90 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-37 1.5E-41 291.8 35.6 276 40-361 116-396 (445)
91 4h5i_A Guanine nucleotide-exch 100.0 1.3E-37 4.4E-42 287.0 30.9 278 4-306 24-343 (365)
92 2pm7_B Protein transport prote 100.0 1.4E-37 4.7E-42 278.8 29.7 243 84-355 6-284 (297)
93 4a11_B DNA excision repair pro 100.0 9.2E-38 3.1E-42 292.8 29.8 309 15-361 22-370 (408)
94 3f3f_A Nucleoporin SEH1; struc 100.0 4.5E-37 1.5E-41 281.5 31.6 266 40-313 9-344 (351)
95 4ggc_A P55CDC, cell division c 100.0 3.2E-36 1.1E-40 272.6 35.0 280 44-357 27-316 (318)
96 2aq5_A Coronin-1A; WD40 repeat 100.0 4.6E-37 1.6E-41 287.8 30.1 276 8-311 49-347 (402)
97 3mmy_A MRNA export factor; mRN 100.0 1.4E-36 4.9E-41 280.5 32.1 278 40-355 37-345 (368)
98 3jrp_A Fusion protein of prote 100.0 5.1E-36 1.7E-40 278.1 32.2 247 40-309 9-290 (379)
99 2aq5_A Coronin-1A; WD40 repeat 100.0 8.5E-36 2.9E-40 279.2 33.1 285 43-361 35-347 (402)
100 3bg1_A Protein SEC13 homolog; 100.0 4.9E-37 1.7E-41 277.7 22.1 244 84-355 10-292 (316)
101 1yfq_A Cell cycle arrest prote 100.0 3.9E-35 1.3E-39 268.4 32.9 264 5-303 22-321 (342)
102 2j04_B YDR362CP, TAU91; beta p 100.0 1.9E-36 6.5E-41 290.0 24.1 244 40-307 131-429 (524)
103 2xyi_A Probable histone-bindin 100.0 6.3E-35 2.2E-39 275.5 33.7 251 34-307 120-411 (430)
104 3dw8_B Serine/threonine-protei 100.0 3.4E-35 1.2E-39 279.0 31.2 285 4-305 38-445 (447)
105 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.3E-34 7.7E-39 273.5 33.0 280 42-355 4-390 (450)
106 3jrp_A Fusion protein of prote 100.0 5.5E-35 1.9E-39 271.1 27.9 250 77-357 3-288 (379)
107 3vu4_A KMHSV2; beta-propeller 100.0 7.1E-35 2.4E-39 267.8 27.0 275 40-358 17-338 (355)
108 1l0q_A Surface layer protein; 100.0 4.1E-33 1.4E-37 259.9 38.7 318 6-358 2-344 (391)
109 3mmy_A MRNA export factor; mRN 100.0 2.5E-34 8.4E-39 265.5 29.8 272 6-306 54-346 (368)
110 3lrv_A PRE-mRNA-splicing facto 100.0 8E-35 2.7E-39 266.5 25.7 265 53-355 46-332 (343)
111 2xyi_A Probable histone-bindin 100.0 3.6E-34 1.2E-38 270.3 29.2 247 84-357 125-411 (430)
112 3f3f_A Nucleoporin SEH1; struc 100.0 2.7E-34 9.2E-39 263.0 27.6 246 84-360 8-341 (351)
113 3jro_A Fusion protein of prote 100.0 1.4E-34 4.7E-39 291.5 27.5 248 40-307 7-286 (753)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-34 3.9E-39 271.0 24.7 263 40-354 13-295 (588)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.1E-33 1.7E-37 264.1 35.0 241 40-306 100-391 (450)
116 3bws_A Protein LP49; two-domai 100.0 1.5E-33 5.1E-38 266.6 31.2 305 11-355 94-431 (433)
117 2j04_A TAU60, YPL007P, hypothe 100.0 1.9E-34 6.4E-39 269.6 23.1 280 3-358 24-323 (588)
118 4gq1_A NUP37; propeller, trans 100.0 7.7E-34 2.6E-38 264.6 26.1 293 7-304 31-387 (393)
119 2w18_A PALB2, fancn, partner a 100.0 8E-32 2.7E-36 236.8 32.5 270 9-304 57-355 (356)
120 3jro_A Fusion protein of prote 100.0 2.6E-33 8.9E-38 282.2 26.0 244 84-356 6-285 (753)
121 1l0q_A Surface layer protein; 100.0 2E-31 6.8E-36 248.5 34.1 272 56-363 3-282 (391)
122 3bws_A Protein LP49; two-domai 100.0 3.2E-31 1.1E-35 250.6 35.8 273 5-306 133-432 (433)
123 3vu4_A KMHSV2; beta-propeller 100.0 1.9E-31 6.5E-36 245.0 31.4 263 4-307 29-337 (355)
124 4gq1_A NUP37; propeller, trans 100.0 1.6E-32 5.5E-37 255.7 23.3 229 95-355 99-388 (393)
125 3lrv_A PRE-mRNA-splicing facto 100.0 2.5E-31 8.7E-36 243.2 21.3 237 94-357 45-293 (343)
126 2w18_A PALB2, fancn, partner a 100.0 1.1E-29 3.6E-34 223.4 30.4 273 44-354 41-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.6E-29 1.2E-33 234.4 31.0 287 7-327 76-408 (415)
128 1nir_A Nitrite reductase; hemo 100.0 5.5E-29 1.9E-33 240.2 33.1 319 5-364 148-522 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.8E-28 6.3E-33 229.6 25.7 285 42-362 62-393 (415)
130 1ri6_A Putative isomerase YBHE 100.0 1.2E-26 4E-31 212.0 31.7 296 7-327 6-333 (343)
131 1nir_A Nitrite reductase; hemo 100.0 6.8E-26 2.3E-30 218.6 33.6 289 3-315 187-523 (543)
132 3u4y_A Uncharacterized protein 100.0 2.5E-25 8.5E-30 202.3 34.1 277 4-309 8-307 (331)
133 2ecf_A Dipeptidyl peptidase IV 100.0 3.3E-26 1.1E-30 231.0 29.4 295 4-327 46-435 (741)
134 3u4y_A Uncharacterized protein 99.9 4E-25 1.4E-29 200.9 31.7 280 49-359 4-307 (331)
135 2ojh_A Uncharacterized protein 99.9 9.2E-26 3.2E-30 201.3 25.8 255 11-297 17-293 (297)
136 1pby_B Quinohemoprotein amine 99.9 8.7E-26 3E-30 205.7 25.8 273 7-314 2-318 (337)
137 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-25 6E-30 224.5 29.6 317 6-358 35-437 (706)
138 3vgz_A Uncharacterized protein 99.9 2.3E-24 8E-29 197.6 34.6 262 40-327 38-324 (353)
139 2ecf_A Dipeptidyl peptidase IV 99.9 1.6E-25 5.5E-30 226.0 27.3 293 42-355 36-412 (741)
140 3scy_A Hypothetical bacterial 99.9 2.4E-23 8E-28 191.7 36.6 296 6-325 13-360 (361)
141 1pby_B Quinohemoprotein amine 99.9 7.6E-25 2.6E-29 199.4 25.3 269 56-361 2-315 (337)
142 3hfq_A Uncharacterized protein 99.9 2.1E-23 7E-28 191.0 34.9 283 7-311 3-324 (347)
143 1k32_A Tricorn protease; prote 99.9 1.4E-24 4.7E-29 226.7 28.4 324 7-361 25-466 (1045)
144 2ojh_A Uncharacterized protein 99.9 1.5E-24 5.1E-29 193.4 23.1 254 60-346 17-292 (297)
145 1ri6_A Putative isomerase YBHE 99.9 1.1E-23 3.8E-28 192.1 29.3 271 56-355 5-307 (343)
146 1k32_A Tricorn protease; prote 99.9 6.8E-24 2.3E-28 221.5 30.9 278 40-356 201-502 (1045)
147 1xfd_A DIP, dipeptidyl aminope 99.9 3.2E-24 1.1E-28 216.0 26.5 298 5-327 27-420 (723)
148 2z3z_A Dipeptidyl aminopeptida 99.9 1.2E-23 4E-28 211.2 29.6 274 7-308 93-437 (706)
149 3vgz_A Uncharacterized protein 99.9 4.4E-23 1.5E-27 189.1 30.6 264 5-297 51-335 (353)
150 1xfd_A DIP, dipeptidyl aminope 99.9 2.2E-24 7.5E-29 217.2 20.8 295 43-356 17-393 (723)
151 1jmx_B Amine dehydrogenase; ox 99.9 2.9E-22 9.8E-27 183.3 30.1 297 4-316 9-335 (349)
152 3o4h_A Acylamino-acid-releasin 99.9 6E-23 2.1E-27 201.3 24.7 268 41-356 20-315 (582)
153 3hfq_A Uncharacterized protein 99.9 1.9E-21 6.5E-26 177.9 30.4 287 57-362 4-325 (347)
154 1jmx_B Amine dehydrogenase; ox 99.9 4E-22 1.4E-26 182.3 25.2 280 47-361 4-330 (349)
155 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.9E-21 6.4E-26 179.1 28.9 278 7-307 3-342 (365)
156 1z68_A Fibroblast activation p 99.9 7.3E-22 2.5E-26 198.6 26.8 314 8-363 28-450 (719)
157 2oit_A Nucleoporin 214KDA; NH2 99.9 2.7E-22 9.3E-27 188.4 21.1 212 65-307 23-279 (434)
158 3o4h_A Acylamino-acid-releasin 99.9 1.1E-21 3.8E-26 192.3 24.4 259 4-306 31-315 (582)
159 2oiz_A Aromatic amine dehydrog 99.9 3.2E-20 1.1E-24 170.2 32.3 297 3-327 12-358 (361)
160 3scy_A Hypothetical bacterial 99.9 4E-20 1.4E-24 170.0 31.1 288 54-361 12-344 (361)
161 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-21 5.3E-26 183.2 21.2 198 42-263 36-278 (434)
162 1z68_A Fibroblast activation p 99.9 4.8E-22 1.7E-26 199.9 18.9 292 46-355 19-390 (719)
163 3pe7_A Oligogalacturonate lyas 99.9 4.9E-20 1.7E-24 171.2 25.0 274 48-355 41-381 (388)
164 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.4E-19 4.6E-24 166.7 25.6 278 57-357 4-342 (365)
165 4a5s_A Dipeptidyl peptidase 4 99.9 6.6E-20 2.3E-24 184.5 24.2 271 42-322 16-369 (740)
166 3pe7_A Oligogalacturonate lyas 99.9 2.4E-19 8.3E-24 166.4 25.9 273 4-304 45-380 (388)
167 4a5s_A Dipeptidyl peptidase 4 99.8 3.3E-18 1.1E-22 172.2 31.0 297 4-327 26-426 (740)
168 3azo_A Aminopeptidase; POP fam 99.8 1E-18 3.5E-23 174.0 26.2 288 40-362 21-375 (662)
169 1q7f_A NHL, brain tumor CG1071 99.8 7.7E-18 2.6E-22 149.4 28.8 241 40-307 27-281 (286)
170 3dsm_A Uncharacterized protein 99.8 1.1E-17 3.8E-22 151.3 30.2 282 14-327 15-322 (328)
171 3fvz_A Peptidyl-glycine alpha- 99.8 5.2E-18 1.8E-22 153.7 27.6 249 42-306 23-322 (329)
172 3c5m_A Oligogalacturonate lyas 99.8 3.8E-19 1.3E-23 165.5 19.6 277 42-355 35-381 (396)
173 3c5m_A Oligogalacturonate lyas 99.8 2E-18 6.9E-23 160.6 20.0 273 4-309 45-387 (396)
174 3azo_A Aminopeptidase; POP fam 99.8 6.1E-17 2.1E-21 161.2 29.1 267 13-310 44-373 (662)
175 2gop_A Trilobed protease; beta 99.8 5.1E-17 1.8E-21 148.3 26.1 259 42-355 14-330 (347)
176 2gop_A Trilobed protease; beta 99.8 9.3E-17 3.2E-21 146.6 26.4 242 15-308 42-332 (347)
177 2oiz_A Aromatic amine dehydrog 99.8 1.3E-16 4.5E-21 146.1 27.3 265 4-288 59-360 (361)
178 2xdw_A Prolyl endopeptidase; a 99.8 4.1E-16 1.4E-20 156.2 32.4 246 40-308 122-416 (710)
179 3fvz_A Peptidyl-glycine alpha- 99.8 6.7E-17 2.3E-21 146.3 23.8 226 107-356 69-322 (329)
180 3e5z_A Putative gluconolactona 99.8 4.3E-16 1.5E-20 138.8 28.0 241 40-309 25-289 (296)
181 1q7f_A NHL, brain tumor CG1071 99.8 3.7E-16 1.3E-20 138.5 27.3 230 91-356 35-280 (286)
182 1qks_A Cytochrome CD1 nitrite 99.8 1.9E-15 6.4E-20 145.5 33.5 281 7-314 168-546 (567)
183 2dg1_A DRP35, lactonase; beta 99.8 1.6E-15 5.6E-20 137.5 31.4 255 7-297 18-301 (333)
184 3no2_A Uncharacterized protein 99.8 7.1E-16 2.4E-20 135.4 27.7 238 55-314 5-260 (276)
185 1rwi_B Serine/threonine-protei 99.8 3.3E-16 1.1E-20 137.6 25.3 242 44-309 25-267 (270)
186 2bkl_A Prolyl endopeptidase; m 99.8 2.4E-16 8.3E-21 157.5 26.7 247 40-309 118-400 (695)
187 3sjl_D Methylamine dehydrogena 99.7 2.3E-15 7.9E-20 136.1 28.7 294 3-327 41-384 (386)
188 2dg1_A DRP35, lactonase; beta 99.7 4.8E-16 1.6E-20 141.0 24.6 260 42-327 5-290 (333)
189 3dsm_A Uncharacterized protein 99.7 1.7E-15 5.9E-20 136.9 27.9 267 63-360 15-305 (328)
190 2mad_H Methylamine dehydrogena 99.7 4.6E-14 1.6E-18 129.3 36.2 291 3-322 29-367 (373)
191 2xdw_A Prolyl endopeptidase; a 99.7 2.1E-15 7.3E-20 151.0 28.5 275 53-358 81-416 (710)
192 3e5z_A Putative gluconolactona 99.7 3.3E-15 1.1E-19 133.1 25.9 212 90-325 32-264 (296)
193 2z2n_A Virginiamycin B lyase; 99.7 3.9E-14 1.3E-18 126.1 32.6 265 8-308 27-297 (299)
194 2z2n_A Virginiamycin B lyase; 99.7 7.2E-14 2.5E-18 124.4 34.1 255 40-324 12-274 (299)
195 3no2_A Uncharacterized protein 99.7 6.1E-15 2.1E-19 129.4 25.4 236 4-274 3-262 (276)
196 1rwi_B Serine/threonine-protei 99.7 5.9E-15 2E-19 129.5 23.3 236 91-358 29-266 (270)
197 3c75_H MADH, methylamine dehyd 99.7 2.4E-14 8E-19 131.9 27.4 284 2-314 80-410 (426)
198 2bkl_A Prolyl endopeptidase; m 99.7 5.9E-15 2E-19 147.4 23.4 272 53-359 77-400 (695)
199 1yr2_A Prolyl oligopeptidase; 99.7 2.8E-14 9.5E-19 143.6 27.7 246 40-309 160-444 (741)
200 1qks_A Cytochrome CD1 nitrite 99.7 1.3E-13 4.3E-18 132.8 29.7 250 54-316 166-438 (567)
201 2qc5_A Streptogramin B lactona 99.7 6.1E-13 2.1E-17 118.4 31.6 264 6-304 31-298 (300)
202 3sjl_D Methylamine dehydrogena 99.6 5.4E-14 1.9E-18 127.1 24.4 279 48-361 38-368 (386)
203 2qc5_A Streptogramin B lactona 99.6 1.1E-12 3.7E-17 116.7 32.9 257 40-325 17-280 (300)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.9E-13 6.6E-18 122.6 28.1 241 42-306 17-299 (314)
205 2mad_H Methylamine dehydrogena 99.6 1.1E-12 3.6E-17 120.2 31.1 273 53-361 30-355 (373)
206 3hrp_A Uncharacterized protein 99.6 3.5E-13 1.2E-17 125.3 28.2 240 43-304 131-408 (409)
207 1kb0_A Quinohemoprotein alcoho 99.6 1.2E-12 4.1E-17 129.4 29.8 293 6-317 77-518 (677)
208 1mda_H Methylamine dehydrogena 99.6 3.8E-13 1.3E-17 121.9 24.0 282 6-325 31-365 (368)
209 1yr2_A Prolyl oligopeptidase; 99.6 2.4E-13 8.1E-18 136.8 24.3 274 53-359 116-444 (741)
210 3c75_H MADH, methylamine dehyd 99.6 3.8E-13 1.3E-17 123.9 22.1 275 50-361 79-407 (426)
211 3q7m_A Lipoprotein YFGL, BAMB; 99.6 8.5E-12 2.9E-16 115.0 31.0 309 5-353 52-375 (376)
212 3g4e_A Regucalcin; six bladed 99.6 1.3E-12 4.6E-17 116.2 24.6 229 42-295 12-261 (297)
213 1yiq_A Quinohemoprotein alcoho 99.6 4.6E-12 1.6E-16 125.5 29.5 292 6-316 70-515 (689)
214 1xip_A Nucleoporin NUP159; bet 99.5 2E-13 6.9E-18 123.9 17.8 173 87-294 39-232 (388)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 4.8E-12 1.6E-16 113.4 26.7 226 12-263 42-299 (314)
216 1xip_A Nucleoporin NUP159; bet 99.5 4.6E-13 1.6E-17 121.6 18.5 173 43-249 38-230 (388)
217 3g4e_A Regucalcin; six bladed 99.5 1.7E-11 5.8E-16 109.0 28.1 213 91-325 18-249 (297)
218 3iuj_A Prolyl endopeptidase; h 99.5 3.8E-12 1.3E-16 126.9 26.3 243 40-309 126-408 (693)
219 3hxj_A Pyrrolo-quinoline quino 99.5 3.2E-12 1.1E-16 115.5 21.8 294 5-355 29-323 (330)
220 3hrp_A Uncharacterized protein 99.5 7.4E-12 2.5E-16 116.3 24.6 227 91-353 136-407 (409)
221 3dr2_A Exported gluconolactona 99.5 1.3E-11 4.4E-16 110.2 25.2 227 40-297 42-298 (305)
222 1yiq_A Quinohemoprotein alcoho 99.5 5.4E-12 1.9E-16 125.0 24.8 293 55-360 70-509 (689)
223 2ghs_A AGR_C_1268P; regucalcin 99.5 4.9E-11 1.7E-15 107.5 28.7 222 44-296 50-292 (326)
224 1kb0_A Quinohemoprotein alcoho 99.5 4.8E-12 1.7E-16 125.1 23.1 292 55-360 77-511 (677)
225 2hz6_A Endoplasmic reticulum t 99.4 1.3E-13 4.5E-18 126.5 6.0 196 96-321 8-207 (369)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.5E-10 1.2E-14 104.1 28.9 268 55-360 53-341 (376)
227 2ece_A 462AA long hypothetical 99.4 5.1E-10 1.7E-14 101.9 28.5 223 54-294 94-399 (462)
228 2qe8_A Uncharacterized protein 99.4 2.3E-11 7.9E-16 110.5 19.3 266 43-353 17-318 (343)
229 1kv9_A Type II quinohemoprotei 99.4 2.5E-10 8.5E-15 112.8 27.3 293 6-317 66-499 (668)
230 2hz6_A Endoplasmic reticulum t 99.4 3.1E-13 1E-17 124.0 5.3 223 54-308 8-238 (369)
231 2qe8_A Uncharacterized protein 99.4 9.5E-11 3.2E-15 106.4 21.5 229 40-302 64-317 (343)
232 2ghs_A AGR_C_1268P; regucalcin 99.4 8E-10 2.7E-14 99.5 26.7 212 5-252 60-291 (326)
233 1mda_H Methylamine dehydrogena 99.3 2.3E-11 7.9E-16 110.2 16.4 254 66-361 47-351 (368)
234 3iuj_A Prolyl endopeptidase; h 99.3 7.1E-11 2.4E-15 117.7 21.5 234 91-360 134-409 (693)
235 2ad6_A Methanol dehydrogenase 99.3 1E-09 3.6E-14 106.1 28.9 294 6-319 62-507 (571)
236 3dr2_A Exported gluconolactona 99.3 3.2E-10 1.1E-14 101.2 23.2 210 91-327 50-287 (305)
237 1w6s_A Methanol dehydrogenase 99.3 5.1E-09 1.8E-13 101.2 30.3 295 6-317 62-514 (599)
238 3hxj_A Pyrrolo-quinoline quino 99.3 4.2E-10 1.4E-14 101.4 21.5 254 6-307 70-325 (330)
239 1fwx_A Nitrous oxide reductase 99.3 1.7E-09 5.8E-14 102.0 24.3 223 95-345 99-407 (595)
240 1kv9_A Type II quinohemoprotei 99.3 1.4E-09 4.8E-14 107.4 24.8 293 55-360 66-492 (668)
241 1flg_A Protein (quinoprotein e 99.2 1.5E-08 5.2E-13 98.1 30.6 294 6-320 68-530 (582)
242 1npe_A Nidogen, entactin; glyc 99.2 5.8E-08 2E-12 84.6 30.9 245 56-327 2-261 (267)
243 2ece_A 462AA long hypothetical 99.2 1.6E-08 5.6E-13 92.1 27.1 237 5-251 95-399 (462)
244 1npe_A Nidogen, entactin; glyc 99.2 6.6E-08 2.3E-12 84.2 29.7 251 8-288 3-263 (267)
245 2ad6_A Methanol dehydrogenase 99.2 5.4E-09 1.8E-13 101.1 24.0 290 55-360 62-498 (571)
246 1fwx_A Nitrous oxide reductase 99.1 2.8E-09 9.5E-14 100.5 19.4 234 5-263 100-431 (595)
247 2iwa_A Glutamine cyclotransfer 99.1 2.6E-08 9E-13 85.2 23.6 208 34-263 10-237 (266)
248 1w6s_A Methanol dehydrogenase 99.1 2.5E-08 8.7E-13 96.4 24.9 289 55-360 62-507 (599)
249 3nol_A Glutamine cyclotransfer 99.1 7.5E-08 2.6E-12 81.4 23.6 199 32-253 30-245 (262)
250 1flg_A Protein (quinoprotein e 99.1 6.9E-08 2.4E-12 93.5 25.6 292 55-360 68-520 (582)
251 2fp8_A Strictosidine synthase; 99.0 9.5E-08 3.3E-12 85.7 24.5 237 43-306 19-313 (322)
252 4a2l_A BT_4663, two-component 99.0 1.7E-06 5.9E-11 87.6 35.1 276 6-310 183-484 (795)
253 3nol_A Glutamine cyclotransfer 99.0 7E-08 2.4E-12 81.6 20.6 175 125-327 38-235 (262)
254 2iwa_A Glutamine cyclotransfer 99.0 6E-08 2.1E-12 83.0 20.4 198 125-355 16-236 (266)
255 4a2l_A BT_4663, two-component 99.0 3E-06 1E-10 85.9 36.2 273 6-310 273-575 (795)
256 3nok_A Glutaminyl cyclase; bet 98.9 2.2E-07 7.4E-12 78.5 20.0 182 130-353 57-257 (268)
257 3nok_A Glutaminyl cyclase; bet 98.9 1.7E-07 5.9E-12 79.1 19.0 178 88-294 55-253 (268)
258 3mbr_X Glutamine cyclotransfer 98.9 7.3E-07 2.5E-11 74.7 21.7 187 125-353 16-226 (243)
259 3v65_B Low-density lipoprotein 98.9 5.3E-06 1.8E-10 76.2 28.7 238 15-283 95-337 (386)
260 3mbr_X Glutamine cyclotransfer 98.9 1.8E-06 6E-11 72.4 23.0 181 88-295 21-223 (243)
261 3v9f_A Two-component system se 98.8 1.4E-05 4.8E-10 80.8 33.5 275 5-309 267-571 (781)
262 3v64_C Agrin; beta propeller, 98.8 1.7E-05 5.7E-10 71.7 30.7 236 16-282 53-293 (349)
263 2p4o_A Hypothetical protein; p 98.8 8.4E-06 2.9E-10 72.3 28.1 237 43-297 32-279 (306)
264 3v9f_A Two-component system se 98.8 3.4E-05 1.2E-09 78.0 36.0 274 6-309 221-527 (781)
265 2fp8_A Strictosidine synthase; 98.8 2.3E-06 7.7E-11 76.6 24.5 232 91-355 24-312 (322)
266 1ijq_A LDL receptor, low-densi 98.8 3.3E-05 1.1E-09 68.7 31.4 227 16-272 10-246 (316)
267 1k3i_A Galactose oxidase precu 98.8 2.9E-07 1E-11 91.0 19.4 275 5-295 197-530 (656)
268 3p5b_L Low density lipoprotein 98.8 3.6E-05 1.2E-09 71.0 31.0 240 14-282 90-338 (400)
269 3tc9_A Hypothetical hydrolase; 98.7 5.5E-06 1.9E-10 77.2 25.4 238 44-305 138-429 (430)
270 3v64_C Agrin; beta propeller, 98.7 2.8E-05 9.7E-10 70.2 29.4 254 43-324 34-294 (349)
271 3v65_B Low-density lipoprotein 98.7 3.3E-05 1.1E-09 70.9 28.9 252 46-324 80-337 (386)
272 1k3i_A Galactose oxidase precu 98.7 1.5E-06 5.2E-11 85.9 20.5 245 47-309 190-500 (656)
273 4hw6_A Hypothetical protein, I 98.6 2.4E-05 8.2E-10 72.8 26.3 241 43-305 139-432 (433)
274 1ijq_A LDL receptor, low-densi 98.6 0.00016 5.4E-09 64.3 30.4 231 57-314 3-246 (316)
275 3sov_A LRP-6, low-density lipo 98.6 0.00023 7.8E-09 63.2 30.9 231 15-273 12-247 (318)
276 3sov_A LRP-6, low-density lipo 98.6 0.00018 6.2E-09 63.9 29.5 232 57-314 6-246 (318)
277 2xe4_A Oligopeptidase B; hydro 98.6 4E-05 1.4E-09 76.9 27.5 240 44-308 175-460 (751)
278 3qqz_A Putative uncharacterize 98.5 6E-05 2.1E-09 64.0 23.5 203 40-261 24-251 (255)
279 3kya_A Putative phosphatase; s 98.5 6.3E-05 2.2E-09 70.3 25.3 246 44-309 140-478 (496)
280 3p5b_L Low density lipoprotein 98.5 0.00074 2.5E-08 62.1 32.3 241 56-324 84-339 (400)
281 3m0c_C LDL receptor, low-densi 98.5 0.00028 9.5E-09 70.5 30.3 229 15-272 403-640 (791)
282 2xe4_A Oligopeptidase B; hydro 98.5 2.4E-05 8.3E-10 78.5 22.6 193 90-304 178-398 (751)
283 3ei3_A DNA damage-binding prot 98.5 0.00048 1.6E-08 71.9 32.7 309 6-358 523-915 (1158)
284 3tc9_A Hypothetical hydrolase; 98.5 6.2E-05 2.1E-09 70.0 23.5 150 90-263 141-301 (430)
285 3qqz_A Putative uncharacterize 98.5 0.0004 1.4E-08 58.9 26.4 203 89-304 28-251 (255)
286 2p4o_A Hypothetical protein; p 98.5 0.00019 6.5E-09 63.5 25.8 215 6-253 43-278 (306)
287 2xbg_A YCF48-like protein; pho 98.4 0.00077 2.6E-08 60.1 31.5 271 42-353 35-319 (327)
288 3amr_A 3-phytase; beta-propell 98.4 0.00015 5.3E-09 63.9 23.5 204 96-314 39-272 (355)
289 4a0p_A LRP6, LRP-6, low-densit 98.4 0.0012 4.2E-08 64.3 31.6 232 7-270 7-243 (628)
290 1n7d_A LDL receptor, low-densi 98.4 2.4E-06 8.1E-11 84.7 12.6 240 15-283 385-633 (699)
291 2vpj_A Kelch-like protein 12; 98.3 0.00012 4.1E-09 64.6 21.2 230 55-309 15-281 (301)
292 2vpj_A Kelch-like protein 12; 98.3 0.00015 5E-09 64.0 21.7 230 5-263 14-278 (301)
293 2xbg_A YCF48-like protein; pho 98.3 0.0018 6.1E-08 57.8 31.9 228 42-303 79-319 (327)
294 3ii7_A Kelch-like protein 7; p 98.3 0.00023 7.9E-09 62.9 22.3 229 6-263 12-272 (306)
295 4hw6_A Hypothetical protein, I 98.3 0.00059 2E-08 63.4 25.6 237 6-262 152-432 (433)
296 3m0c_C LDL receptor, low-densi 98.2 0.0022 7.6E-08 64.1 30.0 230 57-314 397-640 (791)
297 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0051 1.7E-07 60.0 31.9 232 56-313 7-244 (628)
298 3amr_A 3-phytase; beta-propell 98.2 0.00047 1.6E-08 60.9 21.5 189 138-355 39-262 (355)
299 2xn4_A Kelch-like protein 2; s 98.2 0.00064 2.2E-08 59.9 22.7 228 6-263 16-276 (302)
300 2p9w_A MAL S 1 allergenic prot 98.2 0.0014 4.7E-08 57.4 23.5 202 92-306 19-265 (334)
301 1n7d_A LDL receptor, low-densi 98.1 2.8E-05 9.7E-10 77.0 14.3 226 65-314 386-622 (699)
302 3ii7_A Kelch-like protein 7; p 98.1 0.00041 1.4E-08 61.3 20.5 229 56-309 13-275 (306)
303 3kya_A Putative phosphatase; s 98.1 0.0028 9.5E-08 59.3 26.4 242 7-263 152-475 (496)
304 2xn4_A Kelch-like protein 2; s 98.1 0.00039 1.3E-08 61.3 19.9 230 55-309 16-279 (302)
305 2ism_A Putative oxidoreductase 98.1 0.0028 9.6E-08 57.1 24.8 234 43-294 31-333 (352)
306 2xzh_A Clathrin heavy chain 1; 98.1 0.0047 1.6E-07 53.6 28.6 266 16-310 49-336 (365)
307 1zgk_A Kelch-like ECH-associat 98.1 0.0009 3.1E-08 59.1 21.0 230 5-263 24-287 (308)
308 3s94_A LRP-6, low-density lipo 98.0 0.0033 1.1E-07 61.3 26.0 227 13-268 15-247 (619)
309 4asc_A Kelch repeat and BTB do 98.0 0.0011 3.7E-08 58.8 20.8 227 7-263 6-277 (315)
310 2xzh_A Clathrin heavy chain 1; 98.0 0.006 2E-07 53.0 28.1 243 55-322 36-307 (365)
311 1zgk_A Kelch-like ECH-associat 98.0 0.00084 2.9E-08 59.4 19.1 231 54-309 24-290 (308)
312 2woz_A Kelch repeat and BTB do 97.9 0.003 1E-07 56.1 21.5 227 7-263 17-287 (318)
313 3a9g_A Putative uncharacterize 97.9 0.011 3.8E-07 53.2 25.3 229 43-294 29-330 (354)
314 4asc_A Kelch repeat and BTB do 97.9 0.0015 5.2E-08 57.8 19.4 224 57-309 7-280 (315)
315 1bpo_A Protein (clathrin); cla 97.8 0.017 5.7E-07 52.3 29.9 268 16-312 48-337 (494)
316 3s94_A LRP-6, low-density lipo 97.8 0.029 1E-06 54.6 36.4 308 6-327 96-489 (619)
317 3pbp_A Nucleoporin NUP82; beta 97.8 0.002 6.8E-08 58.2 18.1 160 93-259 28-208 (452)
318 3ei3_A DNA damage-binding prot 97.8 0.058 2E-06 56.5 32.0 325 7-355 618-998 (1158)
319 2p9w_A MAL S 1 allergenic prot 97.7 0.0041 1.4E-07 54.4 18.7 164 129-306 14-215 (334)
320 2ism_A Putative oxidoreductase 97.7 0.012 4.3E-07 52.8 22.5 234 7-251 42-333 (352)
321 2uvk_A YJHT; unknown function, 97.7 0.0031 1.1E-07 56.9 18.7 238 54-312 19-348 (357)
322 3sbq_A Nitrous-oxide reductase 97.7 0.035 1.2E-06 51.9 24.7 237 58-307 73-409 (638)
323 1bpo_A Protein (clathrin); cla 97.7 0.032 1.1E-06 50.6 30.8 235 55-314 35-297 (494)
324 2uvk_A YJHT; unknown function, 97.6 0.014 4.6E-07 52.7 22.0 242 5-272 19-350 (357)
325 2woz_A Kelch repeat and BTB do 97.6 0.0067 2.3E-07 53.7 18.8 224 57-309 18-290 (318)
326 3sre_A PON1, serum paraoxonase 97.5 0.029 9.8E-07 50.2 21.8 193 45-262 52-297 (355)
327 3pbp_A Nucleoporin NUP82; beta 97.4 0.03 1E-06 50.6 20.1 146 138-302 31-208 (452)
328 2be1_A Serine/threonine-protei 97.4 0.00061 2.1E-08 60.4 9.2 113 55-168 10-140 (339)
329 2be1_A Serine/threonine-protei 97.4 0.0011 3.9E-08 58.7 10.3 201 98-319 11-245 (339)
330 2g8s_A Glucose/sorbosone dehyd 97.3 0.084 2.9E-06 47.4 25.3 60 233-293 271-340 (353)
331 1tl2_A L10, protein (tachylect 97.3 0.034 1.2E-06 45.4 17.4 181 97-298 4-202 (236)
332 3a9g_A Putative uncharacterize 97.2 0.12 4E-06 46.4 22.8 230 7-251 40-330 (354)
333 3sre_A PON1, serum paraoxonase 97.1 0.13 4.5E-06 45.9 21.7 189 105-314 81-308 (355)
334 1xi4_A Clathrin heavy chain; a 97.1 0.13 4.5E-06 53.9 22.8 242 50-311 73-336 (1630)
335 3ott_A Two-component system se 97.0 0.32 1.1E-05 48.7 32.3 260 5-302 31-303 (758)
336 2zwa_A Leucine carboxyl methyl 96.9 0.074 2.5E-06 52.6 19.8 196 54-263 397-635 (695)
337 3s25_A Hypothetical 7-bladed b 96.9 0.19 6.4E-06 43.9 25.4 182 48-272 58-262 (302)
338 3ott_A Two-component system se 96.9 0.43 1.5E-05 47.8 31.7 257 6-306 73-352 (758)
339 3s25_A Hypothetical 7-bladed b 96.9 0.2 6.8E-06 43.7 22.1 207 54-306 24-255 (302)
340 3das_A Putative oxidoreductase 96.8 0.27 9.1E-06 43.7 27.8 230 42-294 31-326 (347)
341 3das_A Putative oxidoreductase 96.7 0.29 9.8E-06 43.5 23.4 227 88-327 34-318 (347)
342 3qhy_B Beta-lactamase inhibito 96.7 0.27 9.2E-06 42.4 22.0 223 43-307 24-247 (282)
343 3sbq_A Nitrous-oxide reductase 96.5 0.48 1.6E-05 44.5 20.0 115 128-251 323-453 (638)
344 2zwa_A Leucine carboxyl methyl 96.5 0.15 5.1E-06 50.5 18.0 197 95-310 396-639 (695)
345 1xi4_A Clathrin heavy chain; a 96.3 0.33 1.1E-05 51.0 19.6 235 7-263 78-331 (1630)
346 1tl2_A L10, protein (tachylect 96.3 0.033 1.1E-06 45.5 10.2 109 189-304 42-161 (236)
347 1cru_A Protein (soluble quinop 96.3 0.42 1.4E-05 44.5 18.9 112 128-251 27-162 (454)
348 2g8s_A Glucose/sorbosone dehyd 96.0 0.79 2.7E-05 41.0 23.3 65 189-256 272-347 (353)
349 3b7f_A Glycosyl hydrolase, BNR 95.4 1.5 5.1E-05 39.8 30.1 305 6-325 22-391 (394)
350 3uc1_A DNA gyrase subunit A; D 94.7 2 7E-05 37.7 25.7 245 6-263 3-279 (327)
351 3l6v_A GYRA, DNA gyrase subuni 94.1 3.1 0.0001 37.3 28.2 151 5-158 6-180 (370)
352 3qhy_B Beta-lactamase inhibito 93.6 3.1 0.00011 35.6 24.2 221 15-285 41-263 (282)
353 1cru_A Protein (soluble quinop 93.2 5.2 0.00018 37.0 30.3 104 43-147 27-163 (454)
354 1zi0_A DNA gyrase subunit A; b 93.2 4 0.00014 35.5 28.6 245 5-263 2-277 (307)
355 3q6k_A 43.2 kDa salivary prote 90.1 10 0.00035 34.0 21.7 155 108-263 124-306 (381)
356 1suu_A DNA gyrase subunit A; t 89.3 10 0.00035 32.9 28.4 200 5-217 7-230 (312)
357 1suu_A DNA gyrase subunit A; t 88.3 12 0.00041 32.5 28.8 198 53-263 6-231 (312)
358 2wg3_C Hedgehog-interacting pr 88.3 16 0.00054 33.9 25.9 30 43-73 14-44 (463)
359 3no0_A DNA gyrase subunit A; D 88.1 12 0.00039 31.9 23.8 207 42-263 23-246 (276)
360 3b7f_A Glycosyl hydrolase, BNR 87.2 16 0.00055 32.8 24.7 47 236-284 344-391 (394)
361 1wp5_A Topoisomerase IV; broke 85.6 18 0.0006 31.6 26.5 244 5-263 4-277 (323)
362 4gq2_M Nucleoporin NUP120; bet 85.5 35 0.0012 35.0 18.8 38 234-272 237-274 (950)
363 4gq2_M Nucleoporin NUP120; bet 84.7 25 0.00085 36.1 15.6 38 277-314 237-274 (950)
364 1wp5_A Topoisomerase IV; broke 84.3 20 0.0007 31.2 27.5 199 53-263 3-225 (323)
365 1zi0_A DNA gyrase subunit A; b 82.3 24 0.00081 30.5 28.1 196 54-262 2-225 (307)
366 4fhn_B Nucleoporin NUP120; pro 75.5 37 0.0013 35.6 13.6 38 277-314 239-276 (1139)
367 3no0_A DNA gyrase subunit A; D 74.9 38 0.0013 28.7 23.5 152 96-263 34-196 (276)
368 3uc1_A DNA gyrase subunit A; D 71.9 50 0.0017 28.8 26.9 195 55-263 3-228 (327)
369 3f7f_A Nucleoporin NUP120; nuc 71.7 13 0.00044 36.4 8.2 37 44-83 223-259 (729)
370 3l6v_A GYRA, DNA gyrase subuni 70.4 59 0.002 29.0 29.6 197 53-263 5-265 (370)
371 1zvt_A Topoisomerase IV subuni 70.4 46 0.0016 27.8 17.0 155 99-263 4-163 (256)
372 2wg3_C Hedgehog-interacting pr 69.0 72 0.0025 29.4 25.6 97 8-106 28-159 (463)
373 4hvt_A Ritya.17583.B, post-pro 68.3 95 0.0033 30.5 23.6 236 45-305 131-429 (711)
374 3mvd_K Regulator of chromosome 67.8 71 0.0024 28.9 33.0 287 9-306 36-374 (423)
375 3zwu_A Alkaline phosphatase PH 67.0 19 0.00066 34.4 8.3 58 235-293 478-548 (592)
376 3kci_A Probable E3 ubiquitin-p 62.8 85 0.0029 28.0 27.2 244 8-263 64-345 (389)
377 4fhn_B Nucleoporin NUP120; pro 61.3 31 0.0011 36.2 9.4 38 189-229 239-276 (1139)
378 3q6k_A 43.2 kDa salivary prote 59.4 98 0.0033 27.6 21.2 166 42-217 86-305 (381)
379 4a9v_A PHOX; hydrolase, beta-p 58.7 47 0.0016 31.6 9.0 58 235-293 478-548 (592)
380 3f7f_A Nucleoporin NUP120; nuc 58.2 17 0.00057 35.6 6.2 38 276-315 222-259 (729)
381 3kci_A Probable E3 ubiquitin-p 54.9 1.2E+02 0.004 27.1 28.8 284 6-306 10-345 (389)
382 1sqj_A OXG-RCBH, oligoxylogluc 52.8 1.9E+02 0.0064 28.9 23.3 139 3-148 24-190 (789)
383 1q47_A Semaphorin 3A; beta pro 52.1 37 0.0013 31.7 7.3 62 7-69 422-487 (495)
384 3zwu_A Alkaline phosphatase PH 50.7 55 0.0019 31.3 8.3 59 130-205 478-548 (592)
385 1olz_A Semaphorin 4D; developm 44.3 65 0.0022 31.4 7.9 60 7-69 416-477 (663)
386 3al9_A Plexin-A2; beta-propell 44.3 33 0.0011 32.5 5.7 62 7-69 414-476 (539)
387 1q47_A Semaphorin 3A; beta pro 42.4 1.4E+02 0.0048 27.8 9.6 68 234-301 405-487 (495)
388 4gz8_A Semaphorin-3A; multi-do 42.1 1.6E+02 0.0055 28.6 10.1 67 234-301 413-495 (667)
389 2cn3_A Xyloglucanase, beta-1,4 41.8 2.7E+02 0.0091 27.5 24.1 29 43-71 23-51 (737)
390 1sqj_A OXG-RCBH, oligoxylogluc 41.6 2.8E+02 0.0095 27.6 25.1 30 42-71 14-43 (789)
391 4a9v_A PHOX; hydrolase, beta-p 41.6 1.3E+02 0.0044 28.6 9.1 61 128-205 476-548 (592)
392 4gz8_A Semaphorin-3A; multi-do 38.0 78 0.0027 30.8 7.3 62 7-69 430-495 (667)
393 4hvt_A Ritya.17583.B, post-pro 36.4 3.2E+02 0.011 26.8 21.3 193 92-308 136-383 (711)
394 3nvq_A Semaphorin-7A; beta-pro 34.3 1.1E+02 0.0039 29.1 7.6 63 7-70 381-445 (590)
395 3of7_A Regulator of chromosome 32.7 2.9E+02 0.01 25.3 31.8 204 88-306 148-405 (473)
396 3oky_A Plexin-A2; transmembran 30.8 87 0.003 30.5 6.4 63 7-70 413-476 (681)
397 3mvd_K Regulator of chromosome 28.7 3.2E+02 0.011 24.4 29.7 239 7-263 85-374 (423)
398 1xks_A Nuclear pore complex pr 28.4 3.5E+02 0.012 24.8 18.5 99 15-115 56-171 (450)
399 3al9_A Plexin-A2; beta-propell 28.2 1.6E+02 0.0055 27.8 7.6 69 190-258 402-476 (539)
400 3oky_B Putative uncharacterize 28.1 1.4E+02 0.0048 28.3 7.0 63 7-70 421-496 (565)
401 2zux_A YESW protein; beta-prop 25.9 4.3E+02 0.015 25.1 22.9 202 66-306 293-532 (591)
402 1zvu_A Topoisomerase IV subuni 25.8 4.8E+02 0.016 25.5 15.9 90 189-284 555-649 (716)
403 1zvt_A Topoisomerase IV subuni 25.5 2.9E+02 0.0098 22.9 16.5 149 56-217 3-162 (256)
404 3ol2_B Plexin-B1; beta-propell 24.4 1.3E+02 0.0046 28.2 6.2 61 7-70 401-462 (528)
405 2zd7_A VPS75, vacuolar protein 22.5 20 0.0007 30.1 0.3 36 396-431 222-257 (264)
406 1a12_A RCC1, regulator of chro 21.8 4.2E+02 0.014 23.5 31.3 283 10-306 21-365 (413)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-48 Score=353.87 Aligned_cols=284 Identities=13% Similarity=0.216 Sum_probs=259.3
Q ss_pred CcccceEEEeeecc---CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152 40 TNKASVLALNWGNV---EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY 114 (444)
Q Consensus 40 ~h~~~v~~~~~~~~---~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~ 114 (444)
+|.+.|++++|+|. ++.+|++|+.|++|+||++..++........+|...|.++ ++++.++++++.|++|++||+
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~ 109 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDL 109 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 89999999999941 4679999999999999999877665555566888888776 578899999999999999999
Q ss_pred CCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 115 KTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
.+++++..+..|...+.+++|+|++++|++|+.++.|++|++.+++....+..+.. .|.+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~------------------~v~~~~ 171 (321)
T 3ow8_A 110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK------------------FILSIA 171 (321)
T ss_dssp TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSS------------------CEEEEE
T ss_pred CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCc------------------eEEEEE
Confidence 99998877778889999999999999999999999999999999988888877766 799999
Q ss_pred EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152 195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF 274 (444)
Q Consensus 195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h 274 (444)
|+|++++|++++.|+.|++||++ ..+.+..+.+|..+|.+++|+|++++|++|+.|+.|++||++. ++++..+.+|
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h 247 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIA---TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-ANLAGTLSGH 247 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-CCEEEEECCC
T ss_pred ECCCCCEEEEEcCCCeEEEEECC---CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-cceeEEEcCC
Confidence 99999999999999999999999 7888899999999999999999999999999999999999999 9999999999
Q ss_pred cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
...|++++|+|++++|++++.|++|++||+.+++++..+. |...|.+++|+++ +.++++++.|+.|++|+
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~---------g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN---------GSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT---------SSEEEEEETTCCEEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC---------CCEEEEEeCCCeEEEEe
Confidence 9999999999999999999999999999999999988875 8899999999854 57899999999999998
Q ss_pred C
Q psy8152 354 P 354 (444)
Q Consensus 354 ~ 354 (444)
.
T Consensus 319 ~ 319 (321)
T 3ow8_A 319 C 319 (321)
T ss_dssp C
T ss_pred C
Confidence 5
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-48 Score=365.89 Aligned_cols=281 Identities=15% Similarity=0.235 Sum_probs=261.7
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
+|..+|++++|+ |++.+|++|+.||+|+|||+.+++....+. +|...|.++ +|++++|++|+.|++|++||+.++
T Consensus 106 gh~~~V~~~~~~-p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~--~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 106 GHRSPVTRVIFH-PVFSVMVSASEDATIKVWDYETGDFERTLK--GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp CCSSCEEEEEEC-SSSSEEEEEESSSCEEEEETTTCCCCEEEC--CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred ccCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEEe--ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 899999999999 799999999999999999999999888775 677777665 678999999999999999999999
Q ss_pred CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152 118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP 197 (444)
Q Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 197 (444)
+++..+.+|...|.+++|+|++++|++|+.|++|++||++++.++..+.+|.. +|.+++|+|
T Consensus 183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~------------------~v~~~~~~~ 244 (410)
T 1vyh_C 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE------------------WVRMVRPNQ 244 (410)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS------------------CEEEEEECT
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc------------------cEEEEEECC
Confidence 98888889999999999999999999999999999999999999999888877 899999999
Q ss_pred CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC--------------------CCEEEEEcCCCcEE
Q psy8152 198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ--------------------SHYVIVGSTTGDMM 257 (444)
Q Consensus 198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~dg~i~ 257 (444)
++.+|++|+.|++|++||++ ...+...+..|...|.+++|+|+ +.+|++|+.|+.|+
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~ 321 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVA---TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321 (410)
T ss_dssp TSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred CCCEEEEEcCCCeEEEEECC---CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEE
Confidence 99999999999999999999 77788889999999999999996 67899999999999
Q ss_pred EEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchh
Q psy8152 258 AVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKK 336 (444)
Q Consensus 258 iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 336 (444)
+||+++ +.++..+.+|...|++++|+|++++|++++.||.|++||+.+++++..+. |...|++++|+++
T Consensus 322 iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~--------- 391 (410)
T 1vyh_C 322 MWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT--------- 391 (410)
T ss_dssp EEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSS---------
T ss_pred EEECCC-CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCC---------
Confidence 999999 99999999999999999999999999999999999999999999888876 8889999999855
Q ss_pred hhhccccccCCCccccCC
Q psy8152 337 EEQEHSEEKGDSDEKYDP 354 (444)
Q Consensus 337 ~~~~~s~~~d~~i~~W~~ 354 (444)
+.++++++.|++|++|+.
T Consensus 392 ~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 392 APYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSCEEEEETTSEEEEEC-
T ss_pred CCEEEEEeCCCcEEEEeC
Confidence 568999999999999985
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.4e-47 Score=342.96 Aligned_cols=274 Identities=12% Similarity=0.161 Sum_probs=247.6
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
++.+|++|+.|++|++|++..++. .....+. +|...|.+++|+ +++.++++++.|++|++||+.+++.+..+..+
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~~--~~~~~l~--gh~~~v~~~~~~-~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~ 121 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDERL--DLQWSLE--GHQLGVVSVDIS-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAG 121 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTEE--EEEEEEC--CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEcCCCCEEEEECCCCCe--eeeeeec--cCCCCEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCC
Confidence 456899999999999999987652 1111222 899999999999 79999999999999999999999988877644
Q ss_pred cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152 85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS 164 (444)
Q Consensus 85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 164 (444)
.......+++|++++|++++.++.|++|++.+++....+..|...|.+++|+|++++|++|+.|+.|++||+++++.+..
T Consensus 122 ~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 122 PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp TTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 33444577789999999999999999999999988877778899999999999999999999999999999999999998
Q ss_pred eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152 165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS 244 (444)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 244 (444)
+..|.. +|++++|+|++++|++++.|++|++||++ ....+..+.+|...|.+++|+|++
T Consensus 202 ~~~h~~------------------~v~~l~~spd~~~l~s~s~dg~i~iwd~~---~~~~~~~~~~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 202 LEGHAM------------------PIRSLTFSPDSQLLVTASDDGYIKIYDVQ---HANLAGTLSGHASWVLNVAFCPDD 260 (321)
T ss_dssp ECCCSS------------------CCCEEEECTTSCEEEEECTTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTS
T ss_pred EcccCC------------------ceeEEEEcCCCCEEEEEcCCCeEEEEECC---CcceeEEEcCCCCceEEEEECCCC
Confidence 888777 79999999999999999999999999999 777888899999999999999999
Q ss_pred CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC
Q psy8152 245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH 305 (444)
Q Consensus 245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~ 305 (444)
++|++++.|+.|+|||+.+ ++++.++.+|...|++++|+|++++|++++.||.|+|||+.
T Consensus 261 ~~l~s~s~D~~v~iwd~~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 261 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CEEEEEeCCCcEEEEeCCC-CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999 99999999999999999999999999999999999999974
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.9e-47 Score=372.91 Aligned_cols=330 Identities=11% Similarity=0.108 Sum_probs=262.4
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee--
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV-- 83 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~-- 83 (444)
...|++|+.|+.|++|+..+.+. ...+. +|...|++++|+ |++.+|++|+.|++|++|++.+++....+..
T Consensus 160 ~~~l~s~s~D~~v~lwd~~~~~~----~~~l~--~H~~~V~~v~fs-pdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~ 232 (611)
T 1nr0_A 160 PFRIISGSDDNTVAIFEGPPFKF----KSTFG--EHTKFVHSVRYN-PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS 232 (611)
T ss_dssp SCEEEEEETTSCEEEEETTTBEE----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEECBCTT
T ss_pred CeEEEEEeCCCeEEEEECCCCeE----eeeec--cccCceEEEEEC-CCCCEEEEEECCCcEEEEECCCCcEeeeecccc
Confidence 34699999999999999876653 22233 899999999999 7999999999999999999998887766531
Q ss_pred ---ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc-------------------------------------
Q psy8152 84 ---SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW------------------------------------- 121 (444)
Q Consensus 84 ---~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~------------------------------------- 121 (444)
.+|...|.++ +|++++|++++.|++|++||+.+++++.
T Consensus 233 ~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~ 312 (611)
T 1nr0_A 233 LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 312 (611)
T ss_dssp SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCC
Confidence 1577777665 6899999999999999999998765432
Q ss_pred ------cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeee-ecccceeeEeee-----------------
Q psy8152 122 ------TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSA-KNVSHRVLVYSV----------------- 177 (444)
Q Consensus 122 ------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~~----------------- 177 (444)
.+.+|...|++++|+|++++|++++.|+.|++||+.+++....+ ..|...+..+.+
T Consensus 313 ~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~ 392 (611)
T 1nr0_A 313 LGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV 392 (611)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred CCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEE
Confidence 23468899999999999999999999999999999987665443 223333333332
Q ss_pred ---------------------------CCCcc-------------------cccCccceeEEEEecCCCEEEEEeCCceE
Q psy8152 178 ---------------------------KPDEF-------------------DLRRPVWVNGISFLPNSDKVAVCSKQGYV 211 (444)
Q Consensus 178 ---------------------------~~~~~-------------------~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 211 (444)
+|++. ...+...+.+++|+|++++|++|+.|++|
T Consensus 393 w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v 472 (611)
T 1nr0_A 393 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV 472 (611)
T ss_dssp ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred eecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeE
Confidence 23320 00123457899999999999999999999
Q ss_pred EEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE--eccccCceeEEEecCCCCE
Q psy8152 212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK--YKGFAGCVKDIACPLNENL 289 (444)
Q Consensus 212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~h~~~i~~~~~s~~~~~ 289 (444)
++||+. ......+.. ..|...|++++|+|++++|++++.|++|++|++.+.++++.. +.+|...|++++|+|++++
T Consensus 473 ~lwd~~-~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~ 550 (611)
T 1nr0_A 473 HVYKLS-GASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR 550 (611)
T ss_dssp EEEEEE-TTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSE
T ss_pred EEEEcc-CCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCE
Confidence 999998 222222333 678999999999999999999999999999999862344443 3459999999999999999
Q ss_pred EEEEECCCcEEEEEcCCCc-eE-EEe-ec-CCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152 290 ILSVSLDRHFRVHDFHSKK-LL-RKD-YM-QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP 354 (444)
Q Consensus 290 l~s~~~dg~i~vw~~~~~~-~~-~~~-~~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~ 354 (444)
|++++.|++|++|++.++. .+ ..+ .| ...|.+++|+++ +. +++++.|++|++|++
T Consensus 551 lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d---------~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 551 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE---------TT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEET---------TE-EEEEETTSCEEEEEC
T ss_pred EEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCC---------CE-EEEecCCCCEEEEec
Confidence 9999999999999998865 33 333 36 788999999854 45 999999999999986
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.6e-46 Score=342.23 Aligned_cols=279 Identities=14% Similarity=0.150 Sum_probs=250.7
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
+|...|++++|+ |++.+|++|+.||+|+||++.+++.+..+. .|...|. +++|++++|++++.|+.|++|++.+.
T Consensus 53 gH~~~v~~~~~s-~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 53 GHLAKIYAMHWG-TDSRLLLSASQDGKLIIWDSYTTNKVHAIP--LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp CCSSCEEEEEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred CCCCceEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCcceEee--cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence 899999999999 799999999999999999999998887776 4555554 45789999999999999999999876
Q ss_pred C----ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152 118 P----DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI 193 (444)
Q Consensus 118 ~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (444)
. ....+.+|...|.++.|++++ .+++++.|+.|++||+.+++++..+.+|.. .|+++
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~------------------~v~~~ 190 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTG------------------DVMSL 190 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSS------------------CEEEE
T ss_pred CCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCC------------------ceEEE
Confidence 4 233466799999999999876 488999999999999999999998888877 79999
Q ss_pred EEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc
Q psy8152 194 SFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG 273 (444)
Q Consensus 194 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 273 (444)
+|+|++++|++|+.|++|++||++ ...++..+.+|...|++++|+|++++|++|+.||.|++||++. ++.+..+..
T Consensus 191 ~~~~~~~~l~sg~~d~~v~~wd~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~ 266 (340)
T 1got_B 191 SLAPDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQELMTYSH 266 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETT---TCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECC
T ss_pred EECCCCCEEEEEeCCCcEEEEECC---CCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-CcEEEEEcc
Confidence 999999999999999999999999 7788888999999999999999999999999999999999998 888777752
Q ss_pred --ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152 274 --FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE 350 (444)
Q Consensus 274 --h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~ 350 (444)
+...|++++|+|++++|++|+.|+.|++||+.+++.+..+. |..+|.+++|+++ +.+++|++.|+.|+
T Consensus 267 ~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~d---------g~~l~s~s~D~~i~ 337 (340)
T 1got_B 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD---------GMAVATGSWDSFLK 337 (340)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT---------SSCEEEEETTSCEE
T ss_pred CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCC---------CCEEEEEcCCccEE
Confidence 34579999999999999999999999999999998888775 8899999998854 67899999999999
Q ss_pred ccC
Q psy8152 351 KYD 353 (444)
Q Consensus 351 ~W~ 353 (444)
||+
T Consensus 338 iWd 340 (340)
T 1got_B 338 IWN 340 (340)
T ss_dssp EEC
T ss_pred ecC
Confidence 996
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.8e-46 Score=336.53 Aligned_cols=283 Identities=12% Similarity=0.121 Sum_probs=246.8
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
+|...|++++|+ |++.+|++|+.||.|++||+.++..+..+. .|..+|. .++|++++|++|+.|++|++||+.++
T Consensus 11 ~h~~~V~~~~fs-p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 11 NRSDRVKGIDFH-PTEPWVLTTLYSGRVELWNYETQVEVRSIQ--VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EECSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEE--CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred CCCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCceeEEee--ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 899999999999 799999999999999999999998888776 4555555 45789999999999999999999999
Q ss_pred CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152 118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL 196 (444)
Q Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 196 (444)
+++..+.+|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|.. .|++++|+
T Consensus 88 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~------------------~v~~v~~~ 149 (304)
T 2ynn_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH------------------FVMCVAFN 149 (304)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS------------------CEEEEEEC
T ss_pred cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC------------------cEEEEEEC
Confidence 998888899999999999999999999999999999999886 45566677766 79999999
Q ss_pred c-CCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEcc--CCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152 197 P-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTN--QSHYVIVGSTTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 197 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
| ++.+|++|+.|++|++||++ ...+...+. .+...+..+.|+| ++.+|++|+.|+.|++||+++ ++++.++.
T Consensus 150 p~~~~~l~sgs~D~~v~iwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-~~~~~~~~ 225 (304)
T 2ynn_A 150 PKDPSTFASGCLDRTVKVWSLG---QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLE 225 (304)
T ss_dssp TTCTTEEEEEETTSEEEEEETT---CSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT-TEEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECC---CCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC-CccceeeC
Confidence 9 56899999999999999998 555555544 5567899999987 678999999999999999999 99999999
Q ss_pred cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccc
Q psy8152 273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEK 351 (444)
Q Consensus 273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~ 351 (444)
+|...|++++|+|++++|++++.||+|++||+.+++++..+. +...+.++++.+.- ...++++++. +.+.+
T Consensus 226 ~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~asg~~-~g~~~ 297 (304)
T 2ynn_A 226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG-------RKNYIASGFD-NGFTV 297 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTC-------GGGCEEEEET-TEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCC-------CceEEEEecC-CceEE
Confidence 999999999999999999999999999999999999998886 67889999988652 2234666654 45666
Q ss_pred cCCC
Q psy8152 352 YDPE 355 (444)
Q Consensus 352 W~~~ 355 (444)
|++.
T Consensus 298 ~~~~ 301 (304)
T 2ynn_A 298 LSLG 301 (304)
T ss_dssp EECC
T ss_pred EEec
Confidence 7654
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-46 Score=350.25 Aligned_cols=271 Identities=13% Similarity=0.156 Sum_probs=245.6
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++|+.||.|++|++.+++.. ..+. +|...|++++|+ |++.+|++|+.|++|+|||+.+++++..+.
T Consensus 118 p~~~~l~s~s~Dg~i~vwd~~~~~~~----~~l~--~h~~~V~~v~~~-~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~- 189 (410)
T 1vyh_C 118 PVFSVMVSASEDATIKVWDYETGDFE----RTLK--GHTDSVQDISFD-HSGKLLASCSADMTIKLWDFQGFECIRTMH- 189 (410)
T ss_dssp SSSSEEEEEESSSCEEEEETTTCCCC----EEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCCCEEETTSSCEEECCC-
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEE----EEEe--ccCCcEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeEEEc-
Confidence 34678999999999999999988751 2333 899999999999 799999999999999999999988888775
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
+|...|.++ +|++++|++|+.|++|++||+.++.++..+.+|...|.+++|+|++.+|++|+.|+.|++||+.++++
T Consensus 190 -~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 190 -GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp -CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred -CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 566666654 68899999999999999999999999888889999999999999999999999999999999999999
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecC--------------------CCEEEEEeCCceEEEEEcCCCCC
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--------------------SDKVAVCSKQGYVRVYDPKITTQ 221 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~d~~i~i~d~~~~~~ 221 (444)
...+..|.. .|.+++|+|+ +.+|++|+.|++|++||++ .
T Consensus 269 ~~~~~~h~~------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~---~ 327 (410)
T 1vyh_C 269 KAELREHRH------------------VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS---T 327 (410)
T ss_dssp EEEECCCSS------------------CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT---T
T ss_pred eeEecCCCc------------------eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC---C
Confidence 988888887 5777777764 6799999999999999999 7
Q ss_pred ccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEE
Q psy8152 222 RRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRV 301 (444)
Q Consensus 222 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~v 301 (444)
..++..+.+|...|++++|+|++++|++|+.||.|++||+.+ ++++.++.+|...|++++|+|++++|++|+.||+|+|
T Consensus 328 ~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~v 406 (410)
T 1vyh_C 328 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406 (410)
T ss_dssp TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT-SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 888999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EEcC
Q psy8152 302 HDFH 305 (444)
Q Consensus 302 w~~~ 305 (444)
|+++
T Consensus 407 W~~r 410 (410)
T 1vyh_C 407 WECR 410 (410)
T ss_dssp EC--
T ss_pred EeCC
Confidence 9863
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.4e-46 Score=342.04 Aligned_cols=307 Identities=16% Similarity=0.187 Sum_probs=237.5
Q ss_pred cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc------CCeEEEEeCCCCccccce
Q psy8152 8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS------GQKIKIYDTDFKNFNTNT 81 (444)
Q Consensus 8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~------d~~i~vw~~~~~~~~~~~ 81 (444)
.++.++.+.....|++..... ..|...|++++|+ |++.+|++|+. |+.|++|+..++.....+
T Consensus 18 ~~~~~~g~~~~~~w~~p~~~p----------~~H~~~V~~v~fS-pDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~ 86 (357)
T 4g56_B 18 LYFQSNGSSKGSAWGRPVTAP----------ACMEVQIGAVRYR-RDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL 86 (357)
T ss_dssp --------------------------------CCCSEEEEEEEC-SSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG
T ss_pred eEEecCCCccccccCCCCCCc----------ccccCCEEEEEEC-CCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE
Confidence 344445555667776543221 1699999999999 79999999997 788999998877654333
Q ss_pred --eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152 82 --DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGKENDLKL 153 (444)
Q Consensus 82 --~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 153 (444)
....|...|.++ +|++ .+++++.+|+|+|||+.+++... ...+|...|++++|+|++++|++|+.|+.|++
T Consensus 87 ~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i 165 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSEK-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV 165 (357)
T ss_dssp CSEEEECSSCEEEEEEETTT-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ecccCCCCCCEEEEEEcCCC-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 223566777665 5665 45668899999999998876543 23468999999999999999999999999999
Q ss_pred EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEE--EeC
Q psy8152 154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLK--VDI 230 (444)
Q Consensus 154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~ 230 (444)
||+++++++..+..|.. .|++++|+|++ .+|++++.|++|++||++ ..+++.. +..
T Consensus 166 wd~~~~~~~~~~~~h~~------------------~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~---~~~~~~~~~~~~ 224 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSS------------------EVNCVAACPGKDTIFLSCGEDGRILLWDTR---KPKPATRIDFCA 224 (357)
T ss_dssp EETTTTEEEEEECCCSS------------------CEEEEEECTTCSSCEEEEETTSCEEECCTT---SSSCBCBCCCTT
T ss_pred EECCCCcEEEEEcCCCC------------------CEEEEEEccCCCceeeeeccCCceEEEECC---CCceeeeeeecc
Confidence 99999999999988877 79999999988 588999999999999999 4444443 445
Q ss_pred CCCCeeEEEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCc
Q psy8152 231 PDVALSCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKK 308 (444)
Q Consensus 231 ~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~ 308 (444)
+...+.+++|+|+ +.+|++|+.|+.|++||+++ ++++..+.+|...|++++|+|++ ++|++++.|++|+|||+.+++
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 6778999999997 57899999999999999999 99999999999999999999987 689999999999999999999
Q ss_pred eEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 309 LLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 309 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
++..+.|...|++++|+|. ++.+++|++.|++|++|++..
T Consensus 304 ~~~~~~H~~~V~~vafsP~--------d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 304 VFRDLSHRDFVTGVAWSPL--------DHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEECCCSSCEEEEEECSS--------STTEEEEEETTSCEEEEECC-
T ss_pred EeEECCCCCCEEEEEEeCC--------CCCEEEEEcCCCeEEEEECCC
Confidence 9988889999999999852 246899999999999999864
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.9e-45 Score=336.04 Aligned_cols=282 Identities=12% Similarity=0.116 Sum_probs=251.3
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC-
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP- 118 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~- 118 (444)
+|...|++++|+ |++.+|++|+.|++|+|||..+++....+..+.......+++|++.+|++++.|+.+++|++....
T Consensus 62 gH~~~V~~~~~s-~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 62 GHGNKVLCMDWC-KDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred CCCCeEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence 899999999999 799999999999999999999888887776544444556678999999999999999999986542
Q ss_pred -----ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152 119 -----DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI 193 (444)
Q Consensus 119 -----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (444)
....+..|...|.+++|+|++..|++++.|++|++||+.+++++..+.+|.. .|.++
T Consensus 141 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~------------------~v~~~ 202 (354)
T 2pbi_B 141 ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA------------------DVLCL 202 (354)
T ss_dssp CCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS------------------CEEEE
T ss_pred ccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC------------------CeEEE
Confidence 2224557999999999999999999999999999999999999999988877 79999
Q ss_pred EEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152 194 SFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY 271 (444)
Q Consensus 194 ~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 271 (444)
+|+| ++++|++|+.|++|++||++ ...++..+..|...|++++|+|++.+|++|+.|++|++||++. .+.+..+
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~-~~~~~~~ 278 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMR---SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA-DREVAIY 278 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEE
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECC---CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEE
Confidence 9987 46899999999999999999 7788888999999999999999999999999999999999998 8777776
Q ss_pred ccc--cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCC
Q psy8152 272 KGF--AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDS 348 (444)
Q Consensus 272 ~~h--~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~ 348 (444)
..+ ...+++++|+|++++|++++.|+.|++||+.+++.+..+. |...|.+++|+++ +.++++++.|++
T Consensus 279 ~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd---------g~~l~sgs~D~~ 349 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD---------GTAFCSGSWDHT 349 (354)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT---------SSCEEEEETTSE
T ss_pred cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC---------CCEEEEEcCCCC
Confidence 643 4578999999999999999999999999999998887765 8999999999854 679999999999
Q ss_pred ccccC
Q psy8152 349 DEKYD 353 (444)
Q Consensus 349 i~~W~ 353 (444)
|++|+
T Consensus 350 v~vW~ 354 (354)
T 2pbi_B 350 LRVWA 354 (354)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99995
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=335.71 Aligned_cols=286 Identities=15% Similarity=0.156 Sum_probs=235.7
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC-------cc--ccceeeccccccEEEE--EeCCCeEEEEecCCc
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK-------NF--NTNTDVSFGEGDIVGV--SRYDECILTAVKSGD 108 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-------~~--~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~ 108 (444)
.|...|.+++|+ |++.+|++++ |+++++|+.... .. ........+...|.++ +++ +.|++|+.||+
T Consensus 28 ~~~~~v~~~~fs-~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYR-SDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSGA 104 (344)
T ss_dssp SCCSEEEEEEEC-TTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTSE
T ss_pred cccCCEEEEEEC-CCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCCE
Confidence 567889999999 7999998887 678888863211 00 0111112345567665 555 57889999999
Q ss_pred EEEEEcCCCCcccc----ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccc
Q psy8152 109 VKLWRYKTEPDQWT----NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDL 184 (444)
Q Consensus 109 i~iw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (444)
|+|||+.+++.... ..+|...|++++|+|++++|++|+.|++|++||+.+++++..+.+|..
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~-------------- 170 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA-------------- 170 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--------------
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC--------------
Confidence 99999999876542 347999999999999999999999999999999999999999998887
Q ss_pred cCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEEccC-CCEEEEEcCCCcEEEEE
Q psy8152 185 RRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITTTNQ-SHYVIVGSTTGDMMAVD 260 (444)
Q Consensus 185 ~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd 260 (444)
.|++++|+|++ .+|++++.|++|++||++ ..+++..+. .+...+.+++|+|+ +++|++|+.||.|+|||
T Consensus 171 ----~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 171 ----QVTCVAASPHKDSVFLSCSEDNRILLWDTR---CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp ----CEEEEEECSSCTTEEEEEETTSCEEEEETT---SSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred ----ceEEEEecCCCCCceeeecccccccccccc---ccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 89999999998 688999999999999999 666666553 45567899999995 67889999999999999
Q ss_pred cCCCCcceeEeccccCceeEEEecCCC-CEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhh
Q psy8152 261 LRGKGKPCYKYKGFAGCVKDIACPLNE-NLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQ 339 (444)
Q Consensus 261 ~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 339 (444)
+++ ++++.++.+|...|++++|+|++ ++|++|+.|++|+|||+.+++++....|...|++++|+++-. .+
T Consensus 244 ~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~--------~l 314 (344)
T 4gqb_B 244 TKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNH--------SL 314 (344)
T ss_dssp SCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSST--------TE
T ss_pred CCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCC--------eE
Confidence 999 99999999999999999999998 589999999999999999999877667999999999986521 45
Q ss_pred ccccccCCCccccCCCccc
Q psy8152 340 EHSEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 340 ~~s~~~d~~i~~W~~~~~~ 358 (444)
++|++.|++|++|++....
T Consensus 315 las~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 315 LTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEETTSCEEEEECCC--
T ss_pred EEEEcCCCeEEEEECCCCC
Confidence 7799999999999987543
No 11
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.5e-45 Score=359.36 Aligned_cols=313 Identities=11% Similarity=0.061 Sum_probs=265.0
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
++++.|++++ ++.|++|++.+++. ...+. +|...|++++|+ |++++||+|+.|++|+|||+.+++.......
T Consensus 28 pdg~~l~~~~-~~~v~l~~~~~~~~----~~~~~--~h~~~v~~~~~s-pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~ 99 (611)
T 1nr0_A 28 PAGDKIQYCN-GTSVYTVPVGSLTD----TEIYT--EHSHQTTVAKTS-PSGYYCASGDVHGNVRIWDTTQTTHILKTTI 99 (611)
T ss_dssp TTSSEEEEEE-TTEEEEEETTCSSC----CEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred CCCCEEEeCC-CCEEEEecCCCccc----CeEec--CCCCceEEEEEC-CCCcEEEEEeCCCCEEEeECCCCcceeeEee
Confidence 4567888877 56999999986653 12233 899999999999 7999999999999999999976655444444
Q ss_pred ccccccEEEE--EeCCCeEEEEecC----CcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEc
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKS----GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDL 156 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~ 156 (444)
.+|..+|.++ +|++++|++++.+ +.|++|+ .++....+.+|...|++++|+|++. .|++|+.|++|++||.
T Consensus 100 ~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~ 177 (611)
T 1nr0_A 100 PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 177 (611)
T ss_dssp ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEET
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence 5777777665 7889999988865 3677777 4556666888999999999999876 6999999999999999
Q ss_pred CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-------
Q psy8152 157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD------- 229 (444)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------- 229 (444)
.+++++..+.+|.. .|++++|+|++++|++++.|++|++||+. ....+..+.
T Consensus 178 ~~~~~~~~l~~H~~------------------~V~~v~fspdg~~las~s~D~~i~lwd~~---~g~~~~~~~~~~~~~~ 236 (611)
T 1nr0_A 178 PPFKFKSTFGEHTK------------------FVHSVRYNPDGSLFASTGGDGTIVLYNGV---DGTKTGVFEDDSLKNV 236 (611)
T ss_dssp TTBEEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---TCCEEEECBCTTSSSC
T ss_pred CCCeEeeeeccccC------------------ceEEEEECCCCCEEEEEECCCcEEEEECC---CCcEeeeecccccccc
Confidence 99998888888887 89999999999999999999999999998 666666663
Q ss_pred CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee----------------------------------------
Q psy8152 230 IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY---------------------------------------- 269 (444)
Q Consensus 230 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~---------------------------------------- 269 (444)
+|...|.+++|+|++++|++++.|++|++||+.+ ++++.
T Consensus 237 ~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~ 315 (611)
T 1nr0_A 237 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGS 315 (611)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTE
T ss_pred ccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC-CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC
Confidence 7999999999999999999999999999999987 65443
Q ss_pred ---EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe--ecCCceeEEEEcCCCcccccchhhhhccccc
Q psy8152 270 ---KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD--YMQSRLTSILVRSDFSLENETKKEEQEHSEE 344 (444)
Q Consensus 270 ---~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~ 344 (444)
.+.+|...|++++|+|++++|++++.|++|++||+.++++...+ .|...|.+++|+++ ..+++++
T Consensus 316 ~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~----------~~l~s~s 385 (611)
T 1nr0_A 316 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK----------GDLFTVS 385 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT----------SCEEEEE
T ss_pred cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC----------CcEEEEE
Confidence 34578999999999999999999999999999999999887664 37888999998854 4688999
Q ss_pred cCCCccccCCCccc
Q psy8152 345 KGDSDEKYDPEHFE 358 (444)
Q Consensus 345 ~d~~i~~W~~~~~~ 358 (444)
.|+.+++|+.....
T Consensus 386 ~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 386 WDDHLKVVPAGGSG 399 (611)
T ss_dssp TTTEEEEECSSSSS
T ss_pred cCCceEEeecCCcc
Confidence 99999999987543
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1e-45 Score=343.51 Aligned_cols=292 Identities=12% Similarity=0.104 Sum_probs=248.4
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC-
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP- 118 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~- 118 (444)
+|.+.|++++|+ |++++|++|+.|++|+|||+.+++....+..+.......+++|++++|++|+.|+.|++|++.+..
T Consensus 64 gH~~~V~~~~~s-p~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 64 GHSGKVYSLDWT-PEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp CCSSCEEEEEEC-TTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred ccccEEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 899999999999 799999999999999999999998888776433333335678999999999999999999987532
Q ss_pred ------ccccccccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152 119 ------DQWTNFNVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN 191 (444)
Q Consensus 119 ------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (444)
....+.+|...|.++.|+|+ +..|++|+.|++|++||+.+++.+..+..... ..+...|.
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~-------------~~h~~~v~ 209 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP-------------SGHTADVL 209 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS-------------SSCCSCEE
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC-------------CCCccCeE
Confidence 23356789999999999994 66799999999999999999988776621100 01223799
Q ss_pred EEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152 192 GISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK 270 (444)
Q Consensus 192 ~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 270 (444)
+++|+| ++++|++|+.|++|++||++ ....++..+.+|...|++++|+|++++|++|+.||+|++||+++ ++++..
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~ 286 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLR--ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQV 286 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETT--TTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEEEE
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECC--CCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEEEE
Confidence 999987 77999999999999999998 34467788899999999999999999999999999999999999 888888
Q ss_pred ecccc-------CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe-----ecCCceeEEEEcCCCcccccchhhh
Q psy8152 271 YKGFA-------GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD-----YMQSRLTSILVRSDFSLENETKKEE 338 (444)
Q Consensus 271 ~~~h~-------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~ 338 (444)
+..+. ..|++++|+|++++|++|+.||.|++||+..++.+..+ .|...|++++|+++ +.
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~d---------g~ 357 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSD---------GS 357 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSS---------SS
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCC---------CC
Confidence 76543 24899999999999999999999999999998887765 37889999999854 67
Q ss_pred hccccccCCCccccCCCcc
Q psy8152 339 QEHSEEKGDSDEKYDPEHF 357 (444)
Q Consensus 339 ~~~s~~~d~~i~~W~~~~~ 357 (444)
++++++.|++|++|++...
T Consensus 358 ~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 358 ALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEEEECTTSCEEEEECCSS
T ss_pred EEEEeeCCCCEEEEecCCC
Confidence 8999999999999998754
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-44 Score=337.77 Aligned_cols=311 Identities=15% Similarity=0.148 Sum_probs=256.7
Q ss_pred cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc-----------
Q psy8152 17 AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF----------- 85 (444)
Q Consensus 17 ~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~----------- 85 (444)
...+|+....+. ........++|...|++++|+ |++.+|++|+ ++.++||++.+++.+..+..+.
T Consensus 41 ~~~~~~~~~~~~--~~~~~~~~~~h~~~V~~v~fs-pdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~ 116 (393)
T 1erj_A 41 YYILYNPALPRE--IDVELHKSLDHTSVVCCVKFS-NDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNT 116 (393)
T ss_dssp CEEEECTTSCCC--EEEEEEEEEECSSCCCEEEEC-TTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------
T ss_pred eEEEECCCCCcc--cCceeEEecCCCCEEEEEEEC-CCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccc
Confidence 344666544432 122223334799999999999 7999999987 6899999999988776654221
Q ss_pred -----ccccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC
Q psy8152 86 -----GEGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT 158 (444)
Q Consensus 86 -----~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~ 158 (444)
+...| .+++|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||+++
T Consensus 117 ~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 117 SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp ----CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence 11124 45578999999999999999999999988877888999999999999999999999999999999999
Q ss_pred ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEE-------eC
Q psy8152 159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-------DI 230 (444)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~ 230 (444)
+++...+.... .+.+++|+| ++++|++|+.|+.|++||++ ....+..+ .+
T Consensus 197 ~~~~~~~~~~~-------------------~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~---~~~~~~~~~~~~~~~~~ 254 (393)
T 1erj_A 197 GQCSLTLSIED-------------------GVTTVAVSPGDGKYIAAGSLDRAVRVWDSE---TGFLVERLDSENESGTG 254 (393)
T ss_dssp TEEEEEEECSS-------------------CEEEEEECSTTCCEEEEEETTSCEEEEETT---TCCEEEEEC------CC
T ss_pred CeeEEEEEcCC-------------------CcEEEEEECCCCCEEEEEcCCCcEEEEECC---CCcEEEeecccccCCCC
Confidence 98877765443 499999999 88999999999999999998 55555555 57
Q ss_pred CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCC-----------CcceeEeccccCceeEEEecCCCCEEEEEECCCcE
Q psy8152 231 PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGK-----------GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHF 299 (444)
Q Consensus 231 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i 299 (444)
|...|.+++|+|++++|++|+.|+.|++||++.. +.+...+.+|...|.+++|+|++.+|++|+.|+.|
T Consensus 255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 334 (393)
T 1erj_A 255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 334 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE
Confidence 8889999999999999999999999999999751 23456777899999999999999999999999999
Q ss_pred EEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 300 RVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 300 ~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
++||+.+++++..+. |...|.+++|.+..+ ..|++.++++++.|++|+||++..
T Consensus 335 ~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~---~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 335 LFWDKKSGNPLLMLQGHRNSVISVAVANGSS---LGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSCT---TCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEECCCCeEEEEECCCCCCEEEEEecCCcC---cCCCCCEEEEECCCCcEEECcccc
Confidence 999999999888776 889999999987421 115678999999999999998764
No 14
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.5e-44 Score=353.20 Aligned_cols=303 Identities=15% Similarity=0.203 Sum_probs=264.7
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++..|++++.++.|++|+..... +..+. +|...|++++|+ |++.+|++++.|+.|++|++.... +..+.
T Consensus 272 ~d~~~l~~~~~d~~i~~w~~~~~~-----~~~~~--~h~~~v~~~~~~-~~~~~l~t~~~d~~i~~w~~~~~~-~~~~~- 341 (577)
T 2ymu_A 272 PDGQTIASASDDKTVKLWNRNGQL-----LQTLT--GHSSSVWGVAFS-PDGQTIASASDDKTVKLWNRNGQH-LQTLT- 341 (577)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCE-----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSCE-EEEEC-
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcE-----EEEEe--cCCCCeEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCe-eEEEe-
Confidence 456789999999999999965432 23333 899999999999 799999999999999999986544 33443
Q ss_pred ccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 84 SFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 84 ~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
+|...+.+ ++|++++|++++.++.|++|+. +++.+..+..|...|.+++|+|++++|++++.|+.|++|+. +++.
T Consensus 342 -~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~ 418 (577)
T 2ymu_A 342 -GHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL 418 (577)
T ss_dssp -CCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCE
T ss_pred -CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCE
Confidence 56666655 5789999999999999999996 45666677889999999999999999999999999999995 4677
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 241 (444)
+..+..|.. .|++++|+|++++|++++.|+.|++|++. .+.+..+.+|...|++++|+
T Consensus 419 ~~~~~~~~~------------------~v~~~~~s~d~~~l~~~~~d~~v~~w~~~----~~~~~~~~~~~~~v~~~~~s 476 (577)
T 2ymu_A 419 LQTLTGHSS------------------SVWGVAFSPDDQTIASASDDKTVKLWNRN----GQLLQTLTGHSSSVRGVAFS 476 (577)
T ss_dssp EEEEECCSS------------------CEEEEEECTTSSEEEEEETTSEEEEEETT----SCEEEEEECCSSCEEEEEEC
T ss_pred EEEecCCCC------------------CeEEEEECCCCCEEEEEcCCCEEEEEECC----CCEEEEEcCCCCCEEEEEEc
Confidence 777777776 79999999999999999999999999976 56778889999999999999
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCcee
Q psy8152 242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLT 320 (444)
Q Consensus 242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~ 320 (444)
|++++|++++.|+.|++|+. + ++++..+.+|...|++++|+|++++|++++.||.|+|||. +++++..+. |...|+
T Consensus 477 pd~~~las~~~d~~i~iw~~-~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~ 553 (577)
T 2ymu_A 477 PDGQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW 553 (577)
T ss_dssp TTSCEEEEEETTSEEEEEET-T-SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCEEEEEcC-C-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEE
Confidence 99999999999999999995 5 7899999999999999999999999999999999999996 567777765 899999
Q ss_pred EEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
+++|+++ +++++|++.|++|++||
T Consensus 554 ~~~fs~d---------g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 554 GVAFSPD---------GQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECTT---------SSCEEEEETTSCEEEEC
T ss_pred EEEEcCC---------CCEEEEEeCCCEEEEeC
Confidence 9999854 67899999999999997
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9e-45 Score=332.63 Aligned_cols=293 Identities=12% Similarity=0.102 Sum_probs=240.9
Q ss_pred Cccc-ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce-eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152 40 TNKA-SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT-DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 40 ~h~~-~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~-~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~ 115 (444)
+|.. .|++++|+ |++.+|++|+.|++|+||++.++...... ...+|...|.++ +|++++|++++.|++|++|++.
T Consensus 13 ~h~~~~v~~l~~s-p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 13 AHPDSRCWFLAWN-PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp CSTTSCEEEEEEC-TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred CCCCCcEEEEEEC-CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 7887 99999999 79999999999999999999877644322 224777778665 6889999999999999999998
Q ss_pred CCC--ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce---eeeeeecccceeeEeeeCCCcccccCccce
Q psy8152 116 TEP--DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK---NIFSAKNVSHRVLVYSVKPDEFDLRRPVWV 190 (444)
Q Consensus 116 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (444)
.+. ++..+.+|...|.+++|+|++++|++|+.|+.|++||+..+. ++..+..|.. .|
T Consensus 92 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~------------------~v 153 (345)
T 3fm0_A 92 QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ------------------DV 153 (345)
T ss_dssp CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS------------------CE
T ss_pred CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC------------------Ce
Confidence 764 445677899999999999999999999999999999998753 3455555555 79
Q ss_pred eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC-----
Q psy8152 191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG----- 265 (444)
Q Consensus 191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----- 265 (444)
.+++|+|++++|++++.|++|++|+++ .....+...+.+|...|.+++|+|++++|++|+.|++|+||++..++
T Consensus 154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~-~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 154 KHVVWHPSQELLASASYDDTVKLYREE-EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEec-CCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccc
Confidence 999999999999999999999999998 22334567888999999999999999999999999999999974311
Q ss_pred ---------cceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc--------eEEEe--ecCCceeEEEEc
Q psy8152 266 ---------KPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK--------LLRKD--YMQSRLTSILVR 325 (444)
Q Consensus 266 ---------~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~--------~~~~~--~~~~~i~~~~~~ 325 (444)
+++..+.+ |...|.+++|+|++.+|++++.|+.|++|+...+. +.... .|...|++++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 312 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN 312 (345)
T ss_dssp CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence 23344554 88899999999999999999999999999987642 11111 378899999998
Q ss_pred CCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152 326 SDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 326 ~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
++- ..+++|++.|++|++|++...+..
T Consensus 313 p~~--------~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 313 PKE--------PGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp SSS--------TTEEEEEETTSCEEEEEECC----
T ss_pred CCC--------ceEEEEcCCCCcEEEEEecCCCCc
Confidence 652 147999999999999998865543
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.2e-44 Score=326.98 Aligned_cols=271 Identities=13% Similarity=0.157 Sum_probs=237.3
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc--ccce
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF--NTNT 81 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~ 81 (444)
+++.+|++|+.||.|++|++.+++. +..+. .|...|.+++|+ |++.+|++|+.|+.|++|++.+... ....
T Consensus 65 ~d~~~l~s~s~Dg~v~iWd~~~~~~----~~~~~--~~~~~v~~~~~s-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~ 137 (340)
T 1got_B 65 TDSRLLLSASQDGKLIIWDSYTTNK----VHAIP--LRSSWVMTCAYA-PSGNYVACGGLDNICSIYNLKTREGNVRVSR 137 (340)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCE----EEEEE--CSSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTCSBSCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCc----ceEee--cCCccEEEEEEC-CCCCEEEEEeCCCeEEEEECccCCCcceeEE
Confidence 4568999999999999999988764 22222 789999999999 7999999999999999999986542 1222
Q ss_pred eeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce
Q psy8152 82 DVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK 160 (444)
Q Consensus 82 ~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~ 160 (444)
...+|...|.++.+ .+..+++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++||++++.
T Consensus 138 ~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 138 ELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp EEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred EecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 33477778876632 23458999999999999999999888788899999999999999999999999999999999999
Q ss_pred eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC--CCCCeeEE
Q psy8152 161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI--PDVALSCI 238 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~i~~~ 238 (444)
++..+..|.. .|++++|+|++++|++|+.|++|++||++ ....+..+.. +...|+++
T Consensus 218 ~~~~~~~h~~------------------~v~~v~~~p~~~~l~s~s~d~~v~iwd~~---~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 218 CRQTFTGHES------------------DINAICFFPNGNAFATGSDDATCRLFDLR---ADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp EEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCTTCCSCEEEE
T ss_pred eEEEEcCCcC------------------CEEEEEEcCCCCEEEEEcCCCcEEEEECC---CCcEEEEEccCCcccceEEE
Confidence 9988888877 79999999999999999999999999999 5666665543 23479999
Q ss_pred EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152 239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD 303 (444)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~ 303 (444)
+|+|++++|++|+.|+.|++||+.+ ++.+..+.+|...|++++|+|++.+|++|+.|+.|+||+
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCCCEEEEECCCCeEEEEEccc-CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999 999999999999999999999999999999999999996
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.7e-44 Score=325.76 Aligned_cols=281 Identities=12% Similarity=0.165 Sum_probs=243.6
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----cccceeeccccccEEE--EEeCCCeEEEEecCCcEEEE
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----FNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLW 112 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw 112 (444)
+|.+.|++++|+|..+++|++|+.|++|++|++.... .+..+ .+|...|.+ ++|++++|++++.|++|++|
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~--~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF--KGHSHIVQDCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEE--ECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEE--eCCcccEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 8999999999994345899999999999999986432 23334 467777765 57899999999999999999
Q ss_pred EcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152 113 RYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG 192 (444)
Q Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (444)
|+.+++++..+.+|...|.+++|+|++.+|++|+.|++|++||++ ++++..+.+|.. +|.+
T Consensus 93 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~------------------~v~~ 153 (319)
T 3frx_A 93 DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND------------------WVSQ 153 (319)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSS------------------CEEE
T ss_pred ECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCC------------------cEEE
Confidence 999999888888999999999999999999999999999999997 456667777766 7899
Q ss_pred EEEecC------CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc
Q psy8152 193 ISFLPN------SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK 266 (444)
Q Consensus 193 ~~~~~~------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 266 (444)
++|+|. +.+|++++.|+.|++||++ .......+.+|...|.+++|+|++++|++|+.||.|+|||+.+ ++
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~---~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~-~~ 229 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLN---QFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA-KK 229 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETT---TTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TE
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECC---cchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-Cc
Confidence 999885 3589999999999999999 7788888999999999999999999999999999999999999 99
Q ss_pred ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee---------cCCceeEEEEcCCCcccccchhh
Q psy8152 267 PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY---------MQSRLTSILVRSDFSLENETKKE 337 (444)
Q Consensus 267 ~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~ 337 (444)
++..+.. ...|.+++|+|++.+|++++.+ .+++|++..+.++..+. +...+.+++|+ |++
T Consensus 230 ~~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---------pdg 298 (319)
T 3frx_A 230 AMYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWS---------ADG 298 (319)
T ss_dssp EEEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEEC---------TTS
T ss_pred EEEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEEC---------CCC
Confidence 9988885 4689999999999999888755 59999999877766543 34567888887 446
Q ss_pred hhccccccCCCccccCCCc
Q psy8152 338 EQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 338 ~~~~s~~~d~~i~~W~~~~ 356 (444)
+++++++.|+.|+||++.+
T Consensus 299 ~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 299 QTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp SEEEEEETTSCEEEEEEEE
T ss_pred CEEEEeecCceEEEEEEee
Confidence 8999999999999999764
No 18
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-44 Score=339.60 Aligned_cols=319 Identities=10% Similarity=0.172 Sum_probs=262.9
Q ss_pred cccEEEe----------cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-
Q psy8152 6 DYNIYIG----------SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF- 74 (444)
Q Consensus 6 ~~~l~~g----------~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~- 74 (444)
..+|++| +.+|.|++|++.++... +.+..+.|...|++++|+ |++.+|++|+.||.|++|++.+
T Consensus 25 ~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~v~vw~~~~~ 99 (416)
T 2pm9_A 25 IPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE----KPIASLQVDSKFNDLDWS-HNNKIIAGALDNGSLELYSTNEA 99 (416)
T ss_dssp SCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC----SCSCCCCCSSCEEEEEEC-SSSSCEEEEESSSCEEEECCSST
T ss_pred CCEEEEEecCcccccccCCCCeEEEEEccCCCCC----cEEEEEecCCceEEEEEC-CCCCeEEEEccCCeEEEeecccc
Confidence 3589999 88999999999887631 233334789999999999 7999999999999999999987
Q ss_pred ---CccccceeeccccccEEE--EEeC-CCeEEEEecCCcEEEEEcCCCC------ccc---cccccCCCeEEEEEecc-
Q psy8152 75 ---KNFNTNTDVSFGEGDIVG--VSRY-DECILTAVKSGDVKLWRYKTEP------DQW---TNFNVGPQLECMKHNKH- 138 (444)
Q Consensus 75 ---~~~~~~~~~~~~~~~v~~--~s~~-~~~l~~~~~dg~i~iw~~~~~~------~~~---~~~~~~~~v~~~~~~~~- 138 (444)
.+....+. +|...|.+ ++|+ +++|++++.|+.|++|++.+++ ... ....|...|.+++|+|+
T Consensus 100 ~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 177 (416)
T 2pm9_A 100 NNAINSMARFS--NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL 177 (416)
T ss_dssp TSCCCEEEECC--CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC
T ss_pred cccccchhhcc--CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC
Confidence 23444443 66666655 4676 8899999999999999999876 322 23568999999999997
Q ss_pred CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCc---eEEEE
Q psy8152 139 SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQG---YVRVY 214 (444)
Q Consensus 139 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~---~i~i~ 214 (444)
+.+|++++.|+.|++||+++++.+..+..+.. ...+...|++++|+|++ .+|++++.++ .|++|
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSP------------NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCC------------SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEecccc------------ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 78999999999999999999988887766521 00012269999999997 7999999999 99999
Q ss_pred EcCCCCCc-cceEEEe-CCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC-CEE
Q psy8152 215 DPKITTQR-RPVLKVD-IPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE-NLI 290 (444)
Q Consensus 215 d~~~~~~~-~~~~~~~-~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~-~~l 290 (444)
|++ .. .++..+. +|...|.+++|+| ++++|++++.||.|++||+++ ++++..+.+|...|++++|+|++ .+|
T Consensus 246 d~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 246 DLR---NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp ETT---STTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEE
T ss_pred eCC---CCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEE
Confidence 999 43 5666777 8999999999999 899999999999999999999 99999999999999999999999 899
Q ss_pred EEEECCCcEEEEEcCCCceEEEee------------------------------------cCCceeEEEEcCCCcccccc
Q psy8152 291 LSVSLDRHFRVHDFHSKKLLRKDY------------------------------------MQSRLTSILVRSDFSLENET 334 (444)
Q Consensus 291 ~s~~~dg~i~vw~~~~~~~~~~~~------------------------------------~~~~i~~~~~~~~~~~~~~~ 334 (444)
++++.|+.|++|++.+........ +..++.+++|+
T Consensus 322 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------- 392 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWA--------- 392 (416)
T ss_dssp EECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEE---------
T ss_pred EEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEe---------
Confidence 999999999999998765322110 33445556655
Q ss_pred hhhhhccccccCCCccccCCCc
Q psy8152 335 KKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 335 ~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
|+++++++++.|+.|+||++..
T Consensus 393 ~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 393 FGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp TTTEEECBCTTSSCBCCBCCCC
T ss_pred eCCeEEEEeCCCCeEEEEEecc
Confidence 5678999999999999999874
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-44 Score=324.98 Aligned_cols=286 Identities=13% Similarity=0.108 Sum_probs=228.1
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc--ccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF--NTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~ 115 (444)
+|..+|++++|+ ++ +|++|+.|++|++|++.++.. ...+...+|...|.++ +|++++|++++.|++|++|++.
T Consensus 12 ~h~~~v~~~~~s-~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~ 88 (330)
T 2hes_X 12 LYKEKIWSFDFS-QG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKE 88 (330)
T ss_dssp CCSSCEEEEEEE-TT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-
T ss_pred cCCCceeeeccC-CC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcc
Confidence 899999999999 44 999999999999999987542 3333222377777665 6889999999999999999985
Q ss_pred CC-------CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC----ceeeeeeecccceeeEeeeCCCcccc
Q psy8152 116 TE-------PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT----TKNIFSAKNVSHRVLVYSVKPDEFDL 184 (444)
Q Consensus 116 ~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (444)
.. +++..+.+|...|.+++|+|++++|++|+.|++|++||++. .+++..+..|..
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~-------------- 154 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ-------------- 154 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS--------------
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC--------------
Confidence 32 33445678999999999999999999999999999999953 245666777766
Q ss_pred cCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC--CCEEEEEcCCCcEEEEEcC
Q psy8152 185 RRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ--SHYVIVGSTTGDMMAVDLR 262 (444)
Q Consensus 185 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~ 262 (444)
.|++++|+|++.+|++++.|++|++|++. .....++..+.+|...|.+++|+|+ +.+|++|+.|++|++|++.
T Consensus 155 ----~v~~v~~~p~~~~l~s~s~D~~i~iW~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 155 ----DVKHVIWHPSEALLASSSYDDTVRIWKDY-DDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp ----CEEEEEECSSSSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred ----ceEEEEECCCCCEEEEEcCCCeEEEEECC-CCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 79999999999999999999999999987 2233678889999999999999998 7789999999999999997
Q ss_pred CCC--------cceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc--eEEEe--ecCC-ceeEEEEcCCC
Q psy8152 263 GKG--------KPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK--LLRKD--YMQS-RLTSILVRSDF 328 (444)
Q Consensus 263 ~~~--------~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~--~~~~~--~~~~-~i~~~~~~~~~ 328 (444)
. + .++..+.+ |...|++++|++++ +|++++.||.|+||+..+++ ++... .|.. .|++++|++.
T Consensus 230 ~-~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~- 306 (330)
T 2hes_X 230 G-DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLEL- 306 (330)
T ss_dssp E-ECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred C-CCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecC-
Confidence 6 4 34455555 89999999999765 89999999999999998874 33333 2665 8999998863
Q ss_pred cccccchhhhhccccccCCCccccCCCc
Q psy8152 329 SLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
.++.++++++.|++|+||++..
T Consensus 307 ------~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 307 ------NGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ---------CCEEEEETTSEEEEEEC--
T ss_pred ------CCceEEEEecCCCcEEEEEecc
Confidence 2457899999999999999763
No 20
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=327.06 Aligned_cols=282 Identities=14% Similarity=0.152 Sum_probs=225.2
Q ss_pred CCcccEEEecCCCcEEEEEcCCC-----ccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKD-----KCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN 78 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~-----~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~ 78 (444)
.++..|++++ ++++++|+.... ......-.......|...|++++|+ ++ +.|++|+.||+|+|||+.+++..
T Consensus 40 ~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~d-~~l~~~s~dg~v~lWd~~~~~~~ 116 (344)
T 4gqb_B 40 SDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWV-GE-RGILVASDSGAVELWELDENETL 116 (344)
T ss_dssp TTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEE-TT-TEEEEEETTSEEEEEEECTTSSC
T ss_pred CCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEe-CC-CeEEEEECCCEEEEEeccCCCce
Confidence 3455566555 778888863211 0000000011112467889999999 55 67889999999999999988876
Q ss_pred ccee--eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccC-CEEEEeeCCCeEEE
Q psy8152 79 TNTD--VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDLKL 153 (444)
Q Consensus 79 ~~~~--~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v 153 (444)
..+. ..+|...|.++ +|++++|++|+.|++|++||+.+++++..+.+|...|++++|+|++ .+|++++.|++|++
T Consensus 117 ~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~i 196 (344)
T 4gqb_B 117 IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILL 196 (344)
T ss_dssp EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred eEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccc
Confidence 5443 45788888765 6899999999999999999999999998888999999999999976 57899999999999
Q ss_pred EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC
Q psy8152 154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD 232 (444)
Q Consensus 154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 232 (444)
||+++++++..+..... ...+++++|+|++ ++|++|+.|++|++||++ ..+++.++.+|.
T Consensus 197 wd~~~~~~~~~~~~~~~----------------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~---~~~~~~~~~~h~ 257 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAP----------------GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK---STSCVLSSAVHS 257 (344)
T ss_dssp EETTSSSCEEECC--------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESC---C--CCEEEECCS
T ss_pred ccccccceeeeeeccee----------------eccceeeeecCCCCcceEEeccCCcEEEEECC---CCcEEEEEcCCC
Confidence 99999988877654332 2258999999965 789999999999999999 788899999999
Q ss_pred CCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCce
Q psy8152 233 VALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKKL 309 (444)
Q Consensus 233 ~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~~ 309 (444)
..|++++|+|++ ++|++|+.|++|+|||+.+ +++ ..+.+|...|++++|+|+++ +|++++.|++|++|++.+..+
T Consensus 258 ~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~-~~~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 258 QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL-SEL-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SCEEEEEECSSSSCCEEEEETTSCEEEECTTC-CEE-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCEEEEEEccCCCeEEEEEeCCCeEEEEECCC-CcE-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 999999999997 5799999999999999998 664 46789999999999999986 677999999999999987543
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.6e-43 Score=318.60 Aligned_cols=282 Identities=16% Similarity=0.212 Sum_probs=249.3
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
+|...|++++|+ |++++|++|+.|+.|++|++.+++....+. +|...|.++ +|++++|++++.|+.|++|++.++
T Consensus 21 gh~~~v~~~~~s-~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 21 GHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred ccCCcEEEEEEC-CCCCEEEEeeCCCeEEEEeCCCcccchhhc--cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence 899999999999 799999999999999999999888877765 667777655 688999999999999999999999
Q ss_pred CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152 118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP 197 (444)
Q Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 197 (444)
+++..+..|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|.. +|.+++|+|
T Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------------------~v~~~~~~~ 159 (312)
T 4ery_A 98 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD------------------PVSAVHFNR 159 (312)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS------------------CEEEEEECT
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC------------------cEEEEEEcC
Confidence 98888888999999999999999999999999999999999998888887776 799999999
Q ss_pred CCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152 198 NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG 276 (444)
Q Consensus 198 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~ 276 (444)
++++|++++.|+.|++||++ ..+.+..+. .+...+..++|+|++++|++++.|+.|++||+++ ++++..+.+|..
T Consensus 160 ~~~~l~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~ 235 (312)
T 4ery_A 160 DGSLIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GKCLKTYTGHKN 235 (312)
T ss_dssp TSSEEEEEETTSCEEEEETT---TCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT-TEEEEEECSSCC
T ss_pred CCCEEEEEeCCCcEEEEECC---CCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEEecCC
Confidence 99999999999999999999 666666554 4566899999999999999999999999999999 999999998876
Q ss_pred ceeE--EEec-CCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccc--cCCCcc
Q psy8152 277 CVKD--IACP-LNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEE--KGDSDE 350 (444)
Q Consensus 277 ~i~~--~~~s-~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~--~d~~i~ 350 (444)
.+.+ ..++ +++.+|++|+.||.|++|++.+++++..+. |...|.+++|++. +.++++++ .|++|+
T Consensus 236 ~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~---------~~~l~s~~~~~d~~i~ 306 (312)
T 4ery_A 236 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT---------ENIIASAALENDKTIK 306 (312)
T ss_dssp SSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSS---------SSEEEEEECTTTCCEE
T ss_pred ceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCc---------CCceEEEEccCCccEE
Confidence 5433 2343 678899999999999999999999988876 8889999999865 46777775 699999
Q ss_pred ccCCC
Q psy8152 351 KYDPE 355 (444)
Q Consensus 351 ~W~~~ 355 (444)
+|+..
T Consensus 307 ~W~~d 311 (312)
T 4ery_A 307 LWKSD 311 (312)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 99853
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.3e-43 Score=320.56 Aligned_cols=271 Identities=18% Similarity=0.220 Sum_probs=235.9
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc----ccc
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN----FNT 79 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~----~~~ 79 (444)
+++.+|++|+.||.|++|+..+++. ...+. .|...|.+++|+ |++.+|++|+.|+.+++|++.... ...
T Consensus 74 ~d~~~l~s~s~Dg~v~vWd~~~~~~----~~~~~--~~~~~v~~~~~s-p~g~~lasg~~d~~i~v~~~~~~~~~~~~~~ 146 (354)
T 2pbi_B 74 KDKRRIVSSSQDGKVIVWDSFTTNK----EHAVT--MPCTWVMACAYA-PSGCAIACGGLDNKCSVYPLTFDKNENMAAK 146 (354)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCE----EEEEE--CSSSCCCEEEEC-TTSSEEEEESTTSEEEEEECCCCTTCCSGGG
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCc----ceEEe--cCCCCEEEEEEC-CCCCEEEEeeCCCCEEEEEEecccccccccc
Confidence 4568999999999999999887764 12222 678899999999 799999999999999999986432 112
Q ss_pred ceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEE
Q psy8152 80 NTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWD 155 (444)
Q Consensus 80 ~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd 155 (444)
......|...|.++ +|++..|++++.|++|++||+.+++++..+.+|...|.+++|+| ++++|++|+.||.|++||
T Consensus 147 ~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd 226 (354)
T 2pbi_B 147 KKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 226 (354)
T ss_dssp CEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEE
T ss_pred ceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 22334667777654 67889999999999999999999999888888999999999988 578999999999999999
Q ss_pred cCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC--CC
Q psy8152 156 LNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP--DV 233 (444)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~ 233 (444)
+++++++..+..|.. .|++++|+|++.+|++++.|++|++||++ ....+..+..+ ..
T Consensus 227 ~~~~~~~~~~~~h~~------------------~v~~v~~~p~~~~l~s~s~D~~v~lwd~~---~~~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 227 MRSGQCVQAFETHES------------------DVNSVRYYPSGDAFASGSDDATCRLYDLR---ADREVAIYSKESIIF 285 (354)
T ss_dssp TTTCCEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCTTCCS
T ss_pred CCCCcEEEEecCCCC------------------CeEEEEEeCCCCEEEEEeCCCeEEEEECC---CCcEEEEEcCCCccc
Confidence 999999988888777 79999999999999999999999999999 55555555433 34
Q ss_pred CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152 234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHD 303 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~ 303 (444)
.+.+++|+|++++|++|+.|+.|++||+.+ ++++..+.+|...|++++|+|++++|++|+.|++|+||+
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLK-GSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCC-CceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 688999999999999999999999999999 999999999999999999999999999999999999995
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.4e-43 Score=322.02 Aligned_cols=284 Identities=12% Similarity=0.180 Sum_probs=233.6
Q ss_pred CcccceEEEee-----eccCCcEEEEEEcCCeEEEEeCCCCccc-----cceeeccccccEEEE--EeCCCeEEEEecCC
Q psy8152 40 TNKASVLALNW-----GNVEESELLIAYSGQKIKIYDTDFKNFN-----TNTDVSFGEGDIVGV--SRYDECILTAVKSG 107 (444)
Q Consensus 40 ~h~~~v~~~~~-----~~~~~~~l~~~~~d~~i~vw~~~~~~~~-----~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg 107 (444)
+|...|++++| +++++.+|++|+.|++|++|++...+.. ....+.+|...|.++ +|++.+|++++.|+
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~ 98 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDK 98 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTS
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCC
Confidence 89999999999 6348999999999999999998754321 112234777777665 67899999999999
Q ss_pred cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeee---cccceeeEeeeCCCcccc
Q psy8152 108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAK---NVSHRVLVYSVKPDEFDL 184 (444)
Q Consensus 108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 184 (444)
+|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.... ..... .|..
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~-------------- 163 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSD-------------- 163 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSS--------------
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCc--------------
Confidence 99999999999888888999999999999999999999999999999998433 32222 2333
Q ss_pred cCccceeEEEEecCC----------CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152 185 RRPVWVNGISFLPNS----------DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG 254 (444)
Q Consensus 185 ~~~~~i~~~~~~~~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 254 (444)
+|.+++|+|++ .+|++++.|+.|++||.. ......+.+|...|.+++|+|++++|++|+.||
T Consensus 164 ----~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg 235 (343)
T 2xzm_R 164 ----WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----FQIRYTFKAHESNVNHLSISPNGKYIATGGKDK 235 (343)
T ss_dssp ----CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTC
T ss_pred ----eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC----CceeEEEcCccccceEEEECCCCCEEEEEcCCC
Confidence 78999999886 789999999999999955 566778889999999999999999999999999
Q ss_pred cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEE--Ee------------ecCCcee
Q psy8152 255 DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR--KD------------YMQSRLT 320 (444)
Q Consensus 255 ~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~--~~------------~~~~~i~ 320 (444)
.|++||+.....+...+. +...|++++|+|++++|++ +.|+.|++|++.+++... .+ .|...+.
T Consensus 236 ~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 313 (343)
T 2xzm_R 236 KLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCT 313 (343)
T ss_dssp EEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEE
T ss_pred eEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceE
Confidence 999999965244555553 5567999999999987765 467889999998866543 22 2556788
Q ss_pred EEEEcCCCcccccchhhhhccccccCCCccccCCCcc
Q psy8152 321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHF 357 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~ 357 (444)
+++|+++ +.++++++.||.|++|++..+
T Consensus 314 ~~~~sp~---------g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 314 SLAWNAL---------GKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEEECSS---------SCCEEEEETTSEEEEEEEEEE
T ss_pred EEEECCC---------CCeEEEecCCceEEEEEEEcc
Confidence 9998854 578999999999999997654
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.6e-43 Score=325.59 Aligned_cols=280 Identities=13% Similarity=0.140 Sum_probs=226.3
Q ss_pred CCCcccEEEecC------CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc
Q psy8152 3 LADDYNIYIGSS------TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN 76 (444)
Q Consensus 3 ~~~~~~l~~g~~------dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~ 76 (444)
++++.+|++|+. |+.|++|+..++....... ....+|...|++++|+ |++ .+++++.||+|+|||+.+++
T Consensus 51 SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~--~~~~~~~~~V~~~~~s-~d~-~~l~~s~dg~v~lWd~~~~~ 126 (357)
T 4g56_B 51 RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC--TAGVQTEAGVTDVAWV-SEK-GILVASDSGAVELWEILEKE 126 (357)
T ss_dssp CSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC--SEEEECSSCEEEEEEE-TTT-EEEEEETTSCEEEC------
T ss_pred CCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe--cccCCCCCCEEEEEEc-CCC-CEEEEECCCEEEEeeccccc
Confidence 357789999987 7789999887665311111 1122789999999999 565 56678889999999998877
Q ss_pred cccc--eeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccC-CEEEEeeCCCeE
Q psy8152 77 FNTN--TDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDL 151 (444)
Q Consensus 77 ~~~~--~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 151 (444)
.... +...+|...|.++ +|++++|++++.|+.|++||+.+++++..+..|...|++++|+|++ .++++++.|+.|
T Consensus 127 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v 206 (357)
T 4g56_B 127 SLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRI 206 (357)
T ss_dssp --CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCE
T ss_pred eeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCce
Confidence 5543 3445778888765 6899999999999999999999999888888899999999999966 588999999999
Q ss_pred EEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeC
Q psy8152 152 KLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDI 230 (444)
Q Consensus 152 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 230 (444)
++||+++++++..+..... ...+++++|+|++ .+|++|+.|+.|++||++ ..+++..+.+
T Consensus 207 ~~wd~~~~~~~~~~~~~~~----------------~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~---~~~~~~~~~~ 267 (357)
T 4g56_B 207 LLWDTRKPKPATRIDFCAS----------------DTIPTSVTWHPEKDDTFACGDETGNVSLVNIK---NPDSAQTSAV 267 (357)
T ss_dssp EECCTTSSSCBCBCCCTTC----------------CSCEEEEEECTTSTTEEEEEESSSCEEEEESS---CGGGCEEECC
T ss_pred EEEECCCCceeeeeeeccc----------------cccccchhhhhcccceEEEeecccceeEEECC---CCcEeEEEec
Confidence 9999999887765543332 2369999999985 789999999999999999 7888999999
Q ss_pred CCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecC-CCCEEEEEECCCcEEEEEcCCC
Q psy8152 231 PDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL-NENLILSVSLDRHFRVHDFHSK 307 (444)
Q Consensus 231 ~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~ 307 (444)
|...|++++|+|++ ++|++|+.|++|+|||+++ ++++..+ +|...|++|+|+| ++.+|++++.||+|++|++.+.
T Consensus 268 ~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 268 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-SEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-CEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-CcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999999987 6799999999999999998 8777655 7999999999998 7899999999999999999763
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.6e-43 Score=319.83 Aligned_cols=286 Identities=13% Similarity=0.141 Sum_probs=230.0
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++|+.||.|+||++..+.... ......+|...|++++|+ |++++|++|+.|++|+||++..+.......+
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~---~~~~~~~h~~~v~~~~~s-p~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWIC---KSVLSEGHQRTVRKVAWS-PCGNYLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEE---EEEECSSCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCccee---eeeeccccCCcEEEEEEC-CCCCEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 467899999999999999998775311 111112899999999999 7999999999999999999987754433444
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc---cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD---QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT 158 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~ 158 (444)
.+|...|.++ +|++++|++++.|++|++|++..+.. +..+..|...|.+++|+|++.+|++|+.|+.|++|++..
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence 5788888665 68899999999999999999987643 335667999999999999999999999999999999988
Q ss_pred ce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC------------ccc
Q psy8152 159 TK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ------------RRP 224 (444)
Q Consensus 159 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~~~ 224 (444)
+. +...+.+|.. .|++++|+|++++|++++.|++|++|+...... ..+
T Consensus 182 ~~~~~~~~~~~h~~------------------~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 182 DDWVCCATLEGHES------------------TVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp TEEEEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred CCEEEEEEecCCCC------------------ceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 65 4456666666 799999999999999999999999999741111 123
Q ss_pred eEEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc----c-----eeEeccccCceeEEEecCCC-CEEEEE
Q psy8152 225 VLKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK----P-----CYKYKGFAGCVKDIACPLNE-NLILSV 293 (444)
Q Consensus 225 ~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~-----~~~~~~h~~~i~~~~~s~~~-~~l~s~ 293 (444)
+..+.+ |...|.+++|+|++.+|++++.|+.|++|+... .. + ...+.+|...|++++|+|++ .+||++
T Consensus 244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 244 ICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDP-NSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp EEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECT-TSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred eEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC-CCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 344444 788999999999999999999999999999875 32 1 12335799999999999998 599999
Q ss_pred ECCCcEEEEEcCCCceEEE
Q psy8152 294 SLDRHFRVHDFHSKKLLRK 312 (444)
Q Consensus 294 ~~dg~i~vw~~~~~~~~~~ 312 (444)
+.||+|++|++.+++.+..
T Consensus 323 s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 323 SDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp ETTSCEEEEEECC------
T ss_pred CCCCcEEEEEecCCCCccc
Confidence 9999999999998776543
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.9e-42 Score=339.77 Aligned_cols=306 Identities=16% Similarity=0.212 Sum_probs=266.3
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++..|++++.+|.|++|+..... +..+. +|...|++++|+ |++.+|++++.|+.|++|+.. ++....+.
T Consensus 231 ~dg~~l~~~~~d~~i~~w~~~~~~-----~~~~~--~~~~~v~~v~~~-~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~- 300 (577)
T 2ymu_A 231 PDGQTIASASDDKTVKLWNRNGQL-----LQTLT--GHSSSVNGVAFR-PDGQTIASASDDKTVKLWNRN-GQLLQTLT- 300 (577)
T ss_dssp TTSSCEEEEETTSCEEEECTTSCE-----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETT-SCEEEEEC-
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCE-----EEEEe--cCCCCEEEEEEc-CCCCEEEEEeCCCEEEEEeCC-CcEEEEEe-
Confidence 456789999999999999964332 23333 799999999999 799999999999999999974 55555554
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
+|...|.++ +|++++|++++.|+.|++|++...... .+..|...|.+++|+|++++|++++.++.|++|+. +++.
T Consensus 301 -~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~ 377 (577)
T 2ymu_A 301 -GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ-TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQL 377 (577)
T ss_dssp -CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCE
T ss_pred -cCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE-EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCE
Confidence 667777654 788999999999999999998765544 57789999999999999999999999999999995 5677
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 241 (444)
+..+..|.. .|++++|+|++++|++++.|+.|++|+.. .+.+..+..|...|++++|+
T Consensus 378 ~~~~~~~~~------------------~v~~~~~s~dg~~l~~~~~d~~v~~~~~~----~~~~~~~~~~~~~v~~~~~s 435 (577)
T 2ymu_A 378 LQTLTGHSS------------------SVRGVAFSPDGQTIASASDDKTVKLWNRN----GQLLQTLTGHSSSVWGVAFS 435 (577)
T ss_dssp EEEEECCSS------------------CEEEEEECTTSSCEEEEETTSEEEEECTT----CCEEEEEECCSSCEEEEEEC
T ss_pred EEEecCCCC------------------CeEEEEECCCCCEEEEEeCCCEEEEEeCC----CCEEEEecCCCCCeEEEEEC
Confidence 777777776 79999999999999999999999999965 56778889999999999999
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCcee
Q psy8152 242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLT 320 (444)
Q Consensus 242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~ 320 (444)
|++++|++++.|+.|++|++ + ++.+..+.+|...|++++|+|++++|++++.|+.|++|+. +++++..+. |...|+
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~-~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR 512 (577)
T ss_dssp TTSSEEEEEETTSEEEEEET-T-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEE
T ss_pred CCCCEEEEEcCCCEEEEEEC-C-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEE
Confidence 99999999999999999996 4 6888999999999999999999999999999999999996 567767665 889999
Q ss_pred EEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
+++|+++ +++|++++.|+.|++|+...
T Consensus 513 ~l~~s~d---------g~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 513 GVAFSPD---------GQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EEEECTT---------SSCEEEEETTSEEEEECTTS
T ss_pred EEEEcCC---------CCEEEEEECcCEEEEEeCCC
Confidence 9999854 67899999999999999753
No 27
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-43 Score=328.81 Aligned_cols=314 Identities=10% Similarity=0.032 Sum_probs=264.0
Q ss_pred Ccc-cEEEecCCCcEEEEEc----CCCcc-----ceeeeeeecc-----cCcccceEEEeeeccCCcEEEEEEcCCeEEE
Q psy8152 5 DDY-NIYIGSSTGAFKGVNL----SKDKC-----IIKNIQNVKY-----ITNKASVLALNWGNVEESELLIAYSGQKIKI 69 (444)
Q Consensus 5 ~~~-~l~~g~~dg~i~i~~~----~~~~~-----~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~v 69 (444)
++. +|++|+.+|.|++|++ .+++. ....+..... .+|...|++++|+ |++.+|++|+.||.|++
T Consensus 56 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~i 134 (425)
T 1r5m_A 56 LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS-HDGNSIVTGVENGELRL 134 (425)
T ss_dssp SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC-TTSSEEEEEETTSCEEE
T ss_pred CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc-CCCCEEEEEeCCCeEEE
Confidence 445 8999999999999999 77662 1111111000 0268899999999 79999999999999999
Q ss_pred EeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCC---------------eEE
Q psy8152 70 YDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQ---------------LEC 132 (444)
Q Consensus 70 w~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~---------------v~~ 132 (444)
|+ .+++....+. .|...|.++ +|++++|++++.++.|++|++.+++.+..+..+... +.+
T Consensus 135 ~~-~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (425)
T 1r5m_A 135 WN-KTGALLNVLN--FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVD 211 (425)
T ss_dssp EE-TTSCEEEEEC--CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSC
T ss_pred Ee-CCCCeeeecc--CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeE
Confidence 99 5566666664 667777665 678999999999999999999998887766666665 999
Q ss_pred EEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEE
Q psy8152 133 MKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVR 212 (444)
Q Consensus 133 ~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 212 (444)
++|+|++ .+++++.++.|++||+.+++.+..+..+.. .|++++|+|++++|++++.|+.|+
T Consensus 212 ~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~------------------~i~~~~~~~~~~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 212 VEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHG------------------PISVLEFNDTNKLLLSASDDGTLR 272 (425)
T ss_dssp CEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSS------------------CEEEEEEETTTTEEEEEETTSCEE
T ss_pred EEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCC------------------ceEEEEECCCCCEEEEEcCCCEEE
Confidence 9999874 688899999999999999888888877766 799999999999999999999999
Q ss_pred EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEE
Q psy8152 213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILS 292 (444)
Q Consensus 213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s 292 (444)
+||++ ....+..+..|...|.+++|+|++ +|++++.++.|++||+++ ++++..+..|...|++++|+|++++|++
T Consensus 273 i~d~~---~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 273 IWHGG---NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQKYAV 347 (425)
T ss_dssp EECSS---SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSSEEEE
T ss_pred EEECC---CCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCCEEEE
Confidence 99999 778888888999999999999999 999999999999999999 9999999999999999999999999999
Q ss_pred EECCCcEEEEEcCCCc--------------------eEEEee-cCC--ceeEEEEcCCCcccccchhhhhccccccCCCc
Q psy8152 293 VSLDRHFRVHDFHSKK--------------------LLRKDY-MQS--RLTSILVRSDFSLENETKKEEQEHSEEKGDSD 349 (444)
Q Consensus 293 ~~~dg~i~vw~~~~~~--------------------~~~~~~-~~~--~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i 349 (444)
++.||.|++|++.+++ ++..+. |.. .|.+++|+++ +.++++++.|+.|
T Consensus 348 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~~~~~dg~i 418 (425)
T 1r5m_A 348 AFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA---------GNKISVAYSLQEG 418 (425)
T ss_dssp EETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT---------SSEEEEEESSSCC
T ss_pred EECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC---------CceEEEEecCceE
Confidence 9999999999999888 777665 544 8999999854 5789999999999
Q ss_pred cccCCC
Q psy8152 350 EKYDPE 355 (444)
Q Consensus 350 ~~W~~~ 355 (444)
++|++.
T Consensus 419 ~iw~~~ 424 (425)
T 1r5m_A 419 SVVAIP 424 (425)
T ss_dssp EEEECC
T ss_pred EEEeec
Confidence 999975
No 28
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.4e-42 Score=314.60 Aligned_cols=274 Identities=12% Similarity=0.147 Sum_probs=233.9
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccc-eeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCI-IKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
..+++|++|+.|+.|++|++...... ...+..+. +|...|++++|+ |++.+|++|+.|++|+|||+.+++.+..+.
T Consensus 28 ~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s-~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~ 104 (319)
T 3frx_A 28 GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK--GHSHIVQDCTLT-ADGAYALSASWDKTLRLWDVATGETYQRFV 104 (319)
T ss_dssp SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCccEEEEecCCccEEEecCCCCCccccccceEEe--CCcccEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCCeeEEEc
Confidence 34578999999999999998754321 11122222 899999999999 799999999999999999999999888775
Q ss_pred eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEecc------CCEEEEeeCCCeEEEE
Q psy8152 83 VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH------SNIIATGGKENDLKLW 154 (444)
Q Consensus 83 ~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~vw 154 (444)
+|...|.++ +|++.+|++++.|++|++|++.. +++..+.+|...|.+++|+|. +.+|++++.|+.|++|
T Consensus 105 --~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~w 181 (319)
T 3frx_A 105 --GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAW 181 (319)
T ss_dssp --CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEE
T ss_pred --cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEE
Confidence 677777765 67889999999999999999974 455568889999999999984 4589999999999999
Q ss_pred EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC
Q psy8152 155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA 234 (444)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (444)
|+++.+....+.+|.. .|++++|+|++++|++++.|++|++||+. ..+++..+..+ ..
T Consensus 182 d~~~~~~~~~~~~h~~------------------~v~~~~~sp~g~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~-~~ 239 (319)
T 3frx_A 182 NLNQFQIEADFIGHNS------------------NINTLTASPDGTLIASAGKDGEIMLWNLA---AKKAMYTLSAQ-DE 239 (319)
T ss_dssp ETTTTEEEEEECCCCS------------------CEEEEEECTTSSEEEEEETTCEEEEEETT---TTEEEEEEECC-SC
T ss_pred ECCcchhheeecCCCC------------------cEEEEEEcCCCCEEEEEeCCCeEEEEECC---CCcEEEEecCC-Cc
Confidence 9999988888888877 79999999999999999999999999999 77788877754 57
Q ss_pred eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec--------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK--------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
|.+++|+|++.+|++++.+ .+++|++.. ...+..+. .|...+.+++|+|+|++|++|+.||.|+||++.+
T Consensus 240 v~~~~~sp~~~~la~~~~~-~i~v~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAATAT-GIKVFSLDP-QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEEEECSSSSEEEEEETT-EEEEEEETT-EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-CcEEEEeCc-CeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 9999999999999988755 599999987 66666554 3466799999999999999999999999999875
Q ss_pred C
Q psy8152 307 K 307 (444)
Q Consensus 307 ~ 307 (444)
+
T Consensus 318 ~ 318 (319)
T 3frx_A 318 A 318 (319)
T ss_dssp C
T ss_pred c
Confidence 4
No 29
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.7e-42 Score=310.48 Aligned_cols=272 Identities=14% Similarity=0.144 Sum_probs=234.3
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++|+.||.|++|++.++.. +..+. .|..+|.+++|+ |++++|++|+.|++|++||+.+++.+..+.
T Consensus 23 p~~~~l~s~~~dg~v~lWd~~~~~~----~~~~~--~~~~~v~~~~~~-~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~- 94 (304)
T 2ynn_A 23 PTEPWVLTTLYSGRVELWNYETQVE----VRSIQ--VTETPVRAGKFI-ARKNWIIVGSDDFRIRVFNYNTGEKVVDFE- 94 (304)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEE----EEEEE--CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred CCCCEEEEEcCCCcEEEEECCCCce----eEEee--ccCCcEEEEEEe-CCCCEEEEECCCCEEEEEECCCCcEEEEEe-
Confidence 4678999999999999999988764 22233 789999999999 799999999999999999999999888775
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT 159 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~ 159 (444)
+|...|.++ +|++++|++|+.|++|++||+.++.. ...+.+|...|.+++|+| ++.+|++|+.|+.|++||++++
T Consensus 95 -~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~ 173 (304)
T 2ynn_A 95 -AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (304)
T ss_dssp -CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred -CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 667777655 68899999999999999999987743 345678999999999999 7899999999999999999887
Q ss_pred eeeeeeecccceeeEeeeCCCcccccCccceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152 160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC 237 (444)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 237 (444)
.+...+..+.. ..+..+.|+| ++.+|++++.|++|++||++ ...++..+.+|...|.+
T Consensus 174 ~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~---~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 174 TPNFTLTTGQE-----------------RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ---TKSCVATLEGHMSNVSF 233 (304)
T ss_dssp SCSEEEECCCT-----------------TCEEEEEECCSTTCCEEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEE
T ss_pred CccceeccCCc-----------------CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC---CCccceeeCCCCCCEEE
Confidence 76655543321 2588888886 66899999999999999999 78889999999999999
Q ss_pred EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC--EEEEEECCCcEEEEEcCC
Q psy8152 238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN--LILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~--~l~s~~~dg~i~vw~~~~ 306 (444)
++|+|++++|++|+.||.|++||+.+ ++++.++..|...+.+++|+|++. ++++|+.+| +.+|++..
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSST-YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTT-CCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCC-CceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 99999999999999999999999999 999999999999999999999875 577766554 77887754
No 30
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.9e-42 Score=316.07 Aligned_cols=310 Identities=11% Similarity=0.144 Sum_probs=261.9
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce--
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT-- 81 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~-- 81 (444)
+++..++++..++.+.+|...... ..+...+|...|++++|+ |++.+|++++ ||.|++|++.++.....+
T Consensus 19 ~dg~~~~~~~~~~~~~~~~~~~~~------~~~~~~~h~~~v~~~~~~-~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~ 90 (337)
T 1gxr_A 19 ADGQMQPVPFPPDALIGPGIPRHA------RQINTLNHGEVVCAVTIS-NPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ 90 (337)
T ss_dssp SSSCEEECCCCTTSSSSTTCCSEE------EEEEEECCSSCCCEEEEC-SSSSEEEEEC-BSEEEEEETTSTTCCSCSEE
T ss_pred CCCCEEEeecCCCcEeccccCCcc------ccceeccCCCceEEEEEe-cCCcEEEEcC-CCeEEEEECCCCCceeeeec
Confidence 455666666666665555332222 233334899999999999 7999999999 999999999877644333
Q ss_pred -eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCC--ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152 82 -DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEP--DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL 156 (444)
Q Consensus 82 -~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~ 156 (444)
....|...+.++ +|++++|++++.++.|++|++.+++ ....+..|...|.+++|+|++++|++++.++.|++||+
T Consensus 91 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 91 LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp EECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 223567777655 6789999999999999999999887 44456678999999999999999999999999999999
Q ss_pred CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152 157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236 (444)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~ 236 (444)
++++.+..+..+.. .|.+++|+|++++|++++.|+.|++||++ ....+..+. +...+.
T Consensus 171 ~~~~~~~~~~~~~~------------------~i~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~~~~~~~-~~~~v~ 228 (337)
T 1gxr_A 171 HNQTLVRQFQGHTD------------------GASCIDISNDGTKLWTGGLDNTVRSWDLR---EGRQLQQHD-FTSQIF 228 (337)
T ss_dssp TTTEEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSEEEEEETT---TTEEEEEEE-CSSCEE
T ss_pred CCCceeeeeecccC------------------ceEEEEECCCCCEEEEEecCCcEEEEECC---CCceEeeec-CCCceE
Confidence 99998888887776 79999999999999999999999999999 666666654 677899
Q ss_pred EEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC
Q psy8152 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ 316 (444)
Q Consensus 237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~ 316 (444)
+++|+|++++|++++.++.|++|+++. .+. ..+..|...|++++|+|++++|++++.||.|++|++.+++.+....+.
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~-~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~ 306 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNK-PDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES 306 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTS-SCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCC-CCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCC
Confidence 999999999999999999999999997 554 567789999999999999999999999999999999999998777899
Q ss_pred CceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152 317 SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP 354 (444)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~ 354 (444)
..+.+++|+++ +.++++++.|+.|++|++
T Consensus 307 ~~v~~~~~s~~---------~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 307 SSVLSCDISVD---------DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SCEEEEEECTT---------SCEEEEEETTSCEEEEEE
T ss_pred CcEEEEEECCC---------CCEEEEecCCCeEEEEEE
Confidence 99999998854 578999999999999986
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.1e-42 Score=314.22 Aligned_cols=276 Identities=17% Similarity=0.153 Sum_probs=224.1
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
++.+|++|+.|++|++|++...............+ +|...|++++|+ |++.+|++|+.|++|++||+.+++.+..+.
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~-~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~- 115 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALS-QENCFAISSSWDKTLRLWDLRTGTTYKRFV- 115 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEEC-SSTTEEEEEETTSEEEEEETTSSCEEEEEE-
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCcEEEEEc-
Confidence 67899999999999999997654211111112222 899999999999 799999999999999999999998887775
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc--cccccCCCeEEEEEeccC----------CEEEEeeCCC
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW--TNFNVGPQLECMKHNKHS----------NIIATGGKEN 149 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~----------~~l~~~~~d~ 149 (444)
+|...|.++ +|++++|++++.|++|++||+....... ....|...|.+++|+|++ .+|++++.|+
T Consensus 116 -~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 194 (343)
T 2xzm_R 116 -GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG 194 (343)
T ss_dssp -CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS
T ss_pred -CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC
Confidence 667777655 7899999999999999999997433221 123688999999999976 7899999999
Q ss_pred eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152 150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD 229 (444)
Q Consensus 150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 229 (444)
.|++||. ..+....+..|.. .|++++|+|++++|++|+.|+.|++||+. ....+...+.
T Consensus 195 ~i~iwd~-~~~~~~~~~~h~~------------------~v~~~~~s~~g~~l~sgs~dg~v~iwd~~--~~~~~~~~~~ 253 (343)
T 2xzm_R 195 RLKVWNT-NFQIRYTFKAHES------------------NVNHLSISPNGKYIATGGKDKKLLIWDIL--NLTYPQREFD 253 (343)
T ss_dssp EEEEEET-TTEEEEEEECCSS------------------CEEEEEECTTSSEEEEEETTCEEEEEESS--CCSSCSEEEE
T ss_pred EEEEEcC-CCceeEEEcCccc------------------cceEEEECCCCCEEEEEcCCCeEEEEECC--CCcccceeec
Confidence 9999994 4566677777776 79999999999999999999999999995 1333444443
Q ss_pred CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee--Eec-----------cccCceeEEEecCCCCEEEEEECC
Q psy8152 230 IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY--KYK-----------GFAGCVKDIACPLNENLILSVSLD 296 (444)
Q Consensus 230 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~-----------~h~~~i~~~~~s~~~~~l~s~~~d 296 (444)
+...|.+++|+|++.+|+++ .|+.|++|++.+ ++... .+. +|...|++++|+|++++|++|+.|
T Consensus 254 -~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 254 -AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMT-QSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp -CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSS-CCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred -CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCC-CCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 45569999999999887755 578899999987 55443 443 678899999999999999999999
Q ss_pred CcEEEEEcCCC
Q psy8152 297 RHFRVHDFHSK 307 (444)
Q Consensus 297 g~i~vw~~~~~ 307 (444)
|.|++|++.++
T Consensus 331 g~v~~w~~~~g 341 (343)
T 2xzm_R 331 GVIRTFSFETS 341 (343)
T ss_dssp SEEEEEEEEEE
T ss_pred ceEEEEEEEcc
Confidence 99999998654
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8e-43 Score=324.07 Aligned_cols=276 Identities=12% Similarity=0.202 Sum_probs=234.5
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----cc
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----FN 78 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----~~ 78 (444)
+++.+|++|+.||.|++|++.+++. ...+. .|...|.+++|+ |++.+|++|+.|+.|++|++.+.. ..
T Consensus 76 p~~~~l~s~s~D~~v~iWd~~~~~~----~~~~~--~h~~~v~~~~~s-~~g~~las~~~d~~v~iw~~~~~~~~~~~~~ 148 (380)
T 3iz6_a 76 PEKNWIVSASQDGRLIVWNALTSQK----THAIK--LHCPWVMECAFA-PNGQSVACGGLDSACSIFNLSSQADRDGNMP 148 (380)
T ss_dssp TTSSCEEEEETTSEEEEEETTTTEE----EEEEE--CCCTTCCCCEEC-TTSSEEEECCSSSCCEEEECCCCSSCCCSST
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcc----ceEEe--cCCCCEEEEEEC-CCCCEEEEeeCCCcEEEEECCCCccccCCcc
Confidence 4668999999999999999988764 12233 799999999999 799999999999999999986532 11
Q ss_pred cceeeccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCCCCccccc-----cccCCCeEEEEEec-cCCEEEEeeCCC
Q psy8152 79 TNTDVSFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKTEPDQWTN-----FNVGPQLECMKHNK-HSNIIATGGKEN 149 (444)
Q Consensus 79 ~~~~~~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~ 149 (444)
......+|...+.++ .|+ +.+|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++++|++|+.|+
T Consensus 149 ~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~ 228 (380)
T 3iz6_a 149 VSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT 228 (380)
T ss_dssp TCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS
T ss_pred ceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC
Confidence 122234777777655 454 467999999999999999999877543 56899999999988 899999999999
Q ss_pred eEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE
Q psy8152 150 DLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV 228 (444)
Q Consensus 150 ~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 228 (444)
.|++||++. ++.+..+.+|.. .|++++|+|++++|++|+.|++|++||++ ...++..+
T Consensus 229 ~v~~wd~~~~~~~~~~~~~h~~------------------~v~~v~~~p~~~~l~s~s~D~~i~lwd~~---~~~~~~~~ 287 (380)
T 3iz6_a 229 TVRLWDLRITSRAVRTYHGHEG------------------DINSVKFFPDGQRFGTGSDDGTCRLFDMR---TGHQLQVY 287 (380)
T ss_dssp CEEEEETTTTCCCCEEECCCSS------------------CCCEEEECTTSSEEEEECSSSCEEEEETT---TTEEEEEE
T ss_pred eEEEEECCCCCcceEEECCcCC------------------CeEEEEEecCCCeEEEEcCCCeEEEEECC---CCcEEEEe
Confidence 999999984 567777877777 79999999999999999999999999999 66677666
Q ss_pred eCCC-------CCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe----ccccCceeEEEecCCCCEEEEEECCC
Q psy8152 229 DIPD-------VALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY----KGFAGCVKDIACPLNENLILSVSLDR 297 (444)
Q Consensus 229 ~~~~-------~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~h~~~i~~~~~s~~~~~l~s~~~dg 297 (444)
..+. ..|++++|+|+|++|++|+.||.|++||+.. ++.+..+ .+|.+.|++++|+|++++|++|+.|+
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC-CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 5432 2489999999999999999999999999998 8887777 57999999999999999999999999
Q ss_pred cEEEEEcCCCc
Q psy8152 298 HFRVHDFHSKK 308 (444)
Q Consensus 298 ~i~vw~~~~~~ 308 (444)
+|+||++...+
T Consensus 367 ~i~iW~~~~~~ 377 (380)
T 3iz6_a 367 NLKIWAFSGHR 377 (380)
T ss_dssp CEEEEECCSSS
T ss_pred CEEEEecCCCc
Confidence 99999998654
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.4e-41 Score=304.75 Aligned_cols=272 Identities=14% Similarity=0.200 Sum_probs=237.0
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++|+.||.|++|++..++. ...+. +|...|.+++|+ |++++|++|+.|+.|++|++.+++.+..+.
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~~~~~----~~~~~--~h~~~v~~~~~~-~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~- 104 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAYDGKF----EKTIS--GHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLK- 104 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCE----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred CCCCEEEEeeCCCeEEEEeCCCccc----chhhc--cCCCceEEEEEc-CCCCEEEEECCCCEEEEEECCCCcEEEEEc-
Confidence 4567899999999999999987764 12222 799999999999 799999999999999999999998888775
Q ss_pred ccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 84 SFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 84 ~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
+|...|.+ ++|++++|++++.|+.|++||+.+++.+..+..|..+|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 105 -~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 105 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp -CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred -CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 56666655 578899999999999999999999998877888999999999999999999999999999999999887
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE--EE
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC--IT 239 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~--~~ 239 (444)
+..+..... ..+.+++|+|++++|++++.|+.|++||++ ..+.+..+.+|...+.+ ..
T Consensus 184 ~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~ 243 (312)
T 4ery_A 184 LKTLIDDDN-----------------PPVSFVKFSPNGKYILAATLDNTLKLWDYS---KGKCLKTYTGHKNEKYCIFAN 243 (312)
T ss_dssp EEEECCSSC-----------------CCEEEEEECTTSSEEEEEETTTEEEEEETT---TTEEEEEECSSCCSSSCCCEE
T ss_pred eeEEeccCC-----------------CceEEEEECCCCCEEEEEcCCCeEEEEECC---CCcEEEEEEecCCceEEEEEE
Confidence 766543222 268999999999999999999999999999 77888888887665433 23
Q ss_pred E-ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE--CCCcEEEEEcC
Q psy8152 240 T-TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS--LDRHFRVHDFH 305 (444)
Q Consensus 240 ~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~ 305 (444)
+ .+++.+|++|+.||.|++||+.+ ++.+..+.+|...|.+++|+|++++|++++ .|++|++|+..
T Consensus 244 ~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 244 FSVTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EECSSSCEEEECCTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEeCCCcEEEEECCCCEEEEEECCC-chhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 3 36788999999999999999999 999999999999999999999999999997 69999999864
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-41 Score=308.67 Aligned_cols=272 Identities=11% Similarity=0.081 Sum_probs=214.8
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC-------cccc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK-------NFNT 79 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~-------~~~~ 79 (444)
.+|++|+.||.|++|++..+.. .....+...+|...|++++|+ |++.+|++|+.|++|+||++... +.+.
T Consensus 25 ~~las~~~D~~i~lw~~~~~~~--~~~~~~~~~~h~~~v~~v~~s-p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~ 101 (330)
T 2hes_X 25 GILATGSTDRKIKLVSVKYDDF--TLIDVLDETAHKKAIRSVAWR-PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLA 101 (330)
T ss_dssp TEEEEEESSSCEEEEECSSSCC--EEEEEECTTCCCSCEEEEEEC-TTSSEEEEEETTSCEEEEEC-------CCCEEEE
T ss_pred CEEEEEcCCCEEEEEEecCCCe--EEEEEEecCCccCCEEEEEEC-CCCCEEEEEeCCCcEEEEEcccCcCccccceeEE
Confidence 3899999999999999987642 112223222499999999999 79999999999999999998532 2233
Q ss_pred ceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC----CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152 80 NTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE----PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKL 153 (444)
Q Consensus 80 ~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 153 (444)
.+ .+|...|.++ +|++++|++|+.|++|++|++... +++..+.+|...|.+++|+|++.+|++|+.|++|++
T Consensus 102 ~~--~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~i 179 (330)
T 2hes_X 102 II--EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRI 179 (330)
T ss_dssp EE--C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred EE--cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 33 4777777665 688999999999999999999432 344456789999999999999999999999999999
Q ss_pred EEcCCc--eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCc-------
Q psy8152 154 WDLNTT--KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQR------- 222 (444)
Q Consensus 154 wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~------- 222 (444)
|++.++ +++..+.+|.. .|.+++|+|+ +.+|++++.|++|++|+++ ..
T Consensus 180 W~~~~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~---~~~~~~~~~ 238 (330)
T 2hes_X 180 WKDYDDDWECVAVLNGHEG------------------TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM---GDDEDDQQE 238 (330)
T ss_dssp EEEETTEEEEEEEECCCSS------------------CEEEEEECCSSSSCEEEEEETTSCEEEEEEE---EECTTSCEE
T ss_pred EECCCCCeeEEEEccCCCC------------------cEEEEEecCCCCeeEEEEEeCCCeEEEEEec---CCCccccce
Confidence 999875 57777877777 7999999998 6789999999999999997 22
Q ss_pred -cceEEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc--ceeE-eccccC-ceeEEEecC--CCCEEEEEE
Q psy8152 223 -RPVLKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK--PCYK-YKGFAG-CVKDIACPL--NENLILSVS 294 (444)
Q Consensus 223 -~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~-~~~h~~-~i~~~~~s~--~~~~l~s~~ 294 (444)
.....+.. |...|.+++|++++ +|++++.||.|+||++.. +. ++.. +.+|.. .|++++|+| ++++|++|+
T Consensus 239 ~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 239 WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD-GEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET-TEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC-CceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 33344444 88899999999765 889999999999999987 63 3333 357877 899999999 688999999
Q ss_pred CCCcEEEEEcCC
Q psy8152 295 LDRHFRVHDFHS 306 (444)
Q Consensus 295 ~dg~i~vw~~~~ 306 (444)
.||+|+||++..
T Consensus 317 ~Dg~v~~W~~~~ 328 (330)
T 2hes_X 317 DDGIVNFWSLEK 328 (330)
T ss_dssp TTSEEEEEEC--
T ss_pred CCCcEEEEEecc
Confidence 999999999864
No 35
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=7.8e-41 Score=317.68 Aligned_cols=302 Identities=12% Similarity=0.191 Sum_probs=270.6
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
++++|++|+.||.|++|++.+++. +..+. +|...|++++|+ +++|++|+.||.|++|++.+++.+..+.
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~----~~~~~--~h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~-- 196 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKC----LRTLV--GHTGGVWSSQMR---DNIIISGSTDRTLKVWNAETGECIHTLY-- 196 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCE----EEECC--CCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEEC--
T ss_pred cCCEEEEEECCCcEEEEECCCCcE----EEEEc--CCCCCEEEEEec---CCEEEEEeCCCeEEEEECCcCcEEEEEC--
Confidence 467899999999999999988774 22233 899999999998 5799999999999999999998887765
Q ss_pred cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152 85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS 164 (444)
Q Consensus 85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 164 (444)
+|...|.++.+++++|++++.||.|++|++.+++.+..+..|...|.+++| ++.+|++|+.||.|++||+++++++..
T Consensus 197 ~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~ 274 (445)
T 2ovr_B 197 GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 274 (445)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEE
T ss_pred CCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEE
Confidence 788999999999999999999999999999999988888889999999999 788999999999999999999999988
Q ss_pred eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152 165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS 244 (444)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 244 (444)
+..|.. .|.+++| ++.+|++++.|+.|++||++ ...++..+.+|...+.++.++ +
T Consensus 275 ~~~~~~------------------~v~~~~~--~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~~v~~~~~~--~ 329 (445)
T 2ovr_B 275 LQGHTN------------------RVYSLQF--DGIHVVSGSLDTSIRVWDVE---TGNCIHTLTGHQSLTSGMELK--D 329 (445)
T ss_dssp ECCCSS------------------CEEEEEE--CSSEEEEEETTSCEEEEETT---TCCEEEEECCCCSCEEEEEEE--T
T ss_pred ecCCCC------------------ceEEEEE--CCCEEEEEeCCCeEEEEECC---CCCEEEEEcCCcccEEEEEEe--C
Confidence 887776 7999999 77999999999999999999 788888899999989888774 6
Q ss_pred CEEEEEcCCCcEEEEEcCCCCcceeEecc---ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe------ec
Q psy8152 245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKG---FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD------YM 315 (444)
Q Consensus 245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~------~~ 315 (444)
++|++|+.||.|++||+++ ++++..+.+ |...|++++|+ +++|++++.||.|++|++.+++.+..+ .+
T Consensus 330 ~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 406 (445)
T 2ovr_B 330 NILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 406 (445)
T ss_dssp TEEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGG
T ss_pred CEEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCC
Confidence 7999999999999999999 999999986 88899999996 579999999999999999999998887 36
Q ss_pred CCceeEEEEcCCCcccccchhhhhccccccCCC----ccccCCCc
Q psy8152 316 QSRLTSILVRSDFSLENETKKEEQEHSEEKGDS----DEKYDPEH 356 (444)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~----i~~W~~~~ 356 (444)
...|++++|+++ +.++++++.||+ +.+|++..
T Consensus 407 ~~~v~~~~~s~~---------~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 407 GGVVWRIRASNT---------KLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp TCEEEEEEECSS---------EEEEEEECSSSSSCCEEEEEECCC
T ss_pred CceEEEEEecCC---------EEEEEEcccCCCCccEEEEEECCC
Confidence 678999998844 678999999998 99999874
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7e-41 Score=306.27 Aligned_cols=286 Identities=16% Similarity=0.203 Sum_probs=241.5
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc---ceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT---NTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY 114 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~---~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~ 114 (444)
+|.+.|++|+|+|..+++|+||+.|++|+||++.+.+... ...+.+|...|.++ +|++++|++++.|+.|++|+.
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~ 115 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL 115 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEee
Confidence 8999999999994346899999999999999997655322 22234677777665 688999999999999999999
Q ss_pred CCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee-eeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152 115 KTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI-FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI 193 (444)
Q Consensus 115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (444)
...........+...+..+.+++.+.+|++++.|+.+++||+...... .....+.. .+..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~------------------~v~~~ 177 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE------------------WVSCV 177 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS------------------CEEEE
T ss_pred cccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC------------------cccce
Confidence 988877767778889999999999999999999999999999875433 33344444 68999
Q ss_pred EEecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152 194 SFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY 271 (444)
Q Consensus 194 ~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 271 (444)
+|++++ .++++++.|+.|++||++ ....+..+.+|...|++++|+|++++|++|+.||.|++||+++ .+++..+
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~ 253 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLA---NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE-GKHLYTL 253 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TEEEEEE
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECC---CCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc-Cceeeee
Confidence 998875 678899999999999999 7888889999999999999999999999999999999999999 8998888
Q ss_pred ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----------cCCceeEEEEcCCCcccccchhhhhcc
Q psy8152 272 KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----------MQSRLTSILVRSDFSLENETKKEEQEH 341 (444)
Q Consensus 272 ~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~~~~~~~~ 341 (444)
.. ...|++++|+|++. +++++.|+.|++|++.++.++..+. |...|++++|+++ +++++
T Consensus 254 ~~-~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d---------g~~l~ 322 (340)
T 4aow_A 254 DG-GDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD---------GQTLF 322 (340)
T ss_dssp EC-SSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT---------SSEEE
T ss_pred cC-CceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC---------CCEEE
Confidence 75 46899999999876 4566679999999999887765542 6678999998744 67899
Q ss_pred ccccCCCccccCCCccc
Q psy8152 342 SEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 342 s~~~d~~i~~W~~~~~~ 358 (444)
+++.||.|+||++.++.
T Consensus 323 sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 323 AGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEETTSCEEEEEEEC--
T ss_pred EEeCCCEEEEEeCCCcC
Confidence 99999999999988654
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.9e-41 Score=312.90 Aligned_cols=285 Identities=14% Similarity=0.188 Sum_probs=231.1
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeec-------------ccCcccceEEEeeeccCCcEEEEEEcCCeEEEE
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK-------------YITNKASVLALNWGNVEESELLIAYSGQKIKIY 70 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~-------------~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw 70 (444)
+++.+|++|+ ++.+++|++.+++.. ..+.... ...+...|++++|+ |++++|++|+.|+.|+||
T Consensus 74 pdg~~la~g~-~~~v~i~~~~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s-~dg~~l~s~~~d~~i~iw 150 (393)
T 1erj_A 74 NDGEYLATGC-NKTTQVYRVSDGSLV-ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS-PDGKFLATGAEDRLIRIW 150 (393)
T ss_dssp TTSSEEEEEC-BSCEEEEETTTCCEE-EEECC-----------------CCCCBEEEEEEC-TTSSEEEEEETTSCEEEE
T ss_pred CCCCEEEEEc-CCcEEEEEecCCCEE-EEecCccccccccccccccccCCCceeEEEEEEC-CCCCEEEEEcCCCeEEEE
Confidence 4567788876 689999999887741 1111000 00233459999999 799999999999999999
Q ss_pred eCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeC
Q psy8152 71 DTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGK 147 (444)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 147 (444)
|+.+++.+..+. +|...|.++ +|++++|++++.|++|++||+.++++.. ...+...+.+++|+| ++++|++|+.
T Consensus 151 d~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 151 DIENRKIVMILQ--GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL-TLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp ETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEECSTTCCEEEEEET
T ss_pred ECCCCcEEEEEc--cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE-EEEcCCCcEEEEEECCCCCEEEEEcC
Confidence 999988877765 677777665 6789999999999999999999988774 455777899999999 8999999999
Q ss_pred CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC-------
Q psy8152 148 ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT------- 220 (444)
Q Consensus 148 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------- 220 (444)
|+.|++||+++++.+..+..... ....+...|++++|+|++++|++++.|++|++||++...
T Consensus 228 d~~v~iwd~~~~~~~~~~~~~~~-----------~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENE-----------SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC-----------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCcEEEEECCCCcEEEeeccccc-----------CCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 99999999999887766531110 001123379999999999999999999999999997210
Q ss_pred --CccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecC------CCCEEEE
Q psy8152 221 --QRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL------NENLILS 292 (444)
Q Consensus 221 --~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~------~~~~l~s 292 (444)
...+...+.+|...|.+++|+|++.+|++|+.|+.|++||+.+ ++++..+.+|...|.+++|++ ++++|++
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~-~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~s 375 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFAT 375 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCC-CeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEE
Confidence 1234567789999999999999999999999999999999999 999999999999999999876 6789999
Q ss_pred EECCCcEEEEEcCC
Q psy8152 293 VSLDRHFRVHDFHS 306 (444)
Q Consensus 293 ~~~dg~i~vw~~~~ 306 (444)
|+.||+|+||++..
T Consensus 376 gs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 376 GSGDCKARIWKYKK 389 (393)
T ss_dssp EETTSEEEEEEEEE
T ss_pred ECCCCcEEECcccc
Confidence 99999999999864
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3e-41 Score=315.58 Aligned_cols=297 Identities=10% Similarity=0.093 Sum_probs=246.8
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc------cccceeeccccccEEEE--EeC----C---CeEEEEe
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN------FNTNTDVSFGEGDIVGV--SRY----D---ECILTAV 104 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~------~~~~~~~~~~~~~v~~~--s~~----~---~~l~~~~ 104 (444)
+|...|++++|+ | ++|++|+.||.|++|++.+++ ....+ ..|...|.++ +|+ + ++|++++
T Consensus 14 ~h~~~i~~~~~~-~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 14 AHDADIFSVSAC-N--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH--FVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp CSSSCEEEEEEC-S--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE--ECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhcCeEEEEec-C--CeEEEEcCCCEEEEEECCCcccccCCCcceEE--ecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 899999999999 5 899999999999999999887 44444 4677777665 677 8 8999999
Q ss_pred cCCcEEEEEcCCCCc-----ccccccc-----CCCeEEEEEe----ccCCE-EEEeeCCCeEEEEEcCC------ceeee
Q psy8152 105 KSGDVKLWRYKTEPD-----QWTNFNV-----GPQLECMKHN----KHSNI-IATGGKENDLKLWDLNT------TKNIF 163 (444)
Q Consensus 105 ~dg~i~iw~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~vwd~~~------~~~~~ 163 (444)
.++.|++|++.+++. ...+..| ...|.+++|+ |++.+ |++++.||.|++||+.+ ++.+.
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence 999999999998886 6566777 4899999999 99999 99999999999999998 66554
Q ss_pred -----eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC---C---C
Q psy8152 164 -----SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI---P---D 232 (444)
Q Consensus 164 -----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~---~ 232 (444)
.+.... .....+...|++++|+|++ +|++++.|+.|++||++ ...++..+.. | .
T Consensus 169 ~~~~~~~~~~~-----------~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 169 WSPTLELQGTV-----------ESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS---TLRPLYNFESQHSMINNS 233 (397)
T ss_dssp CCCEEEEEEEE-----------CCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT---TTEEEEEEECCC---CCC
T ss_pred ccCcceeeeee-----------ccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC---CCceeEEEeccccccccC
Confidence 443200 0000112379999999999 99999999999999999 7888888888 8 9
Q ss_pred CCeeEEEEccCCCEEEEEcCC---CcEEEEEcCCCCcceeEecc-------------ccCceeEEEecCCCCEEEEEECC
Q psy8152 233 VALSCITTTNQSHYVIVGSTT---GDMMAVDLRGKGKPCYKYKG-------------FAGCVKDIACPLNENLILSVSLD 296 (444)
Q Consensus 233 ~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~-------------h~~~i~~~~~s~~~~~l~s~~~d 296 (444)
..|.+++|+|++++|++++.+ |.|++||+++ ++++..+.+ |...|++++|+|++++|++++.|
T Consensus 234 ~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 234 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred CccceEEECCCCCEEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 999999999999999999999 9999999999 999999998 99999999999999999999999
Q ss_pred CcEEEEEcCCCceEEEee-------c---------------CCceeEEEEcCCCccccc-chhhhhccccccCCCccccC
Q psy8152 297 RHFRVHDFHSKKLLRKDY-------M---------------QSRLTSILVRSDFSLENE-TKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 297 g~i~vw~~~~~~~~~~~~-------~---------------~~~i~~~~~~~~~~~~~~-~~~~~~~~s~~~d~~i~~W~ 353 (444)
|.|++|++.+++++..+. | ...|.+++|+++-...+. ..++.++++++.|+.|++|+
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 999999999999988876 4 788999999866200000 01125899999999999999
Q ss_pred CCcc
Q psy8152 354 PEHF 357 (444)
Q Consensus 354 ~~~~ 357 (444)
+..+
T Consensus 393 ~~~g 396 (397)
T 1sq9_A 393 EAGG 396 (397)
T ss_dssp EEC-
T ss_pred cCCC
Confidence 8754
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1e-40 Score=314.49 Aligned_cols=333 Identities=12% Similarity=0.110 Sum_probs=265.0
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++|+.+|.|++|++.+.+.. ..+. .| ..+....|+ +++++|++|+.|+.|++|++.+++....+.
T Consensus 66 ~~g~~l~~~~~d~~v~i~d~~~~~~~----~~~~--~~-~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~- 136 (420)
T 3vl1_A 66 KVGSHLYKARLDGHDFLFNTIIRDGS----KMLK--RA-DYTAVDTAK-LQMRRFILGTTEGDIKVLDSNFNLQREIDQ- 136 (420)
T ss_dssp EEETTEEEEEETTEEEEEECCSEETT----TTSC--SC-CEEEEEEEC-SSSCEEEEEETTSCEEEECTTSCEEEEETT-
T ss_pred ecCCeEEEEEcCCcEEEEEeccccee----eEEe--cC-CceEEEEEe-cCCCEEEEEECCCCEEEEeCCCcceeeecc-
Confidence 35678999999999999998876631 1111 33 444445677 799999999999999999999888776654
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
+|...|.++ +|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 137 -~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 137 -AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp -SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred -cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 667777665 67899999999999999999999998887888999999999999999999999999999999999998
Q ss_pred eeeeec---ccceeeEeeeCCCcc---cccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCC
Q psy8152 162 IFSAKN---VSHRVLVYSVKPDEF---DLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVA 234 (444)
Q Consensus 162 ~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~ 234 (444)
+..+.. +...+..+.+.|... .......+.+++|+|++++|++++.||.|++||++ ....+..+. .|...
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF---SKEQTIQLPSKFTCS 292 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT---TCCEEEEECCTTSSC
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC---CCceeEEcccccCCC
Confidence 888875 334445555543321 12223467888899999999999999999999999 566665554 47889
Q ss_pred eeEEEEccCCC-EEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC-----
Q psy8152 235 LSCITTTNQSH-YVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK----- 307 (444)
Q Consensus 235 i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~----- 307 (444)
|.+++|+|++. +|++|+.||.|++||+++...++..+.+ |...|+++.| +++++|++++.|+.|++|++...
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~ 371 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERP 371 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSC
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCcc
Confidence 99999999998 9999999999999999982345778876 6778888866 57889999999999999998873
Q ss_pred -----ceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 308 -----KLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 308 -----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
.......+...|.+++|+++.. .++ .+++.+.+|.+.+|++..
T Consensus 372 ~~~~~~~~~~~~~~~~v~~~~~s~~~~-----~~g-~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 372 AIEFETPTFLVSNDDAVSQFCYVSDDE-----SNG-EVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EECTTSCEEECCSSCCCCEEEEECCSS-----SSC-EEEEEETTTEEEEEESCC
T ss_pred ceeccCccEEccCCcceEEEEEccCCC-----Ccc-eEEEEcCCceEEEEeccC
Confidence 1222234778899999997743 111 456667789999998764
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-40 Score=309.62 Aligned_cols=278 Identities=12% Similarity=0.158 Sum_probs=237.6
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF 85 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~ 85 (444)
+..+++++.+|.|++|++.+++. .......|...|++++|+ |++.+|++|+.||.|++|++.+++.+..+. +
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~-----~~~~~~~~~~~v~~v~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~ 174 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSV-----SALAETDESTYVASVKWS-HDGSFLSVGLGNGLVDIYDVESQTKLRTMA--G 174 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCE-----EEEEECCTTCCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEEC--C
T ss_pred CCCEEEEECCCeEEEeeCCCCcE-----eEeeecCCCCCEEEEEEC-CCCCEEEEECCCCeEEEEECcCCeEEEEec--C
Confidence 46688999999999999998874 122222589999999999 799999999999999999999998887775 7
Q ss_pred ccccEEEEEeCCCeEEEEecCCcEEEEEcC-CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152 86 GEGDIVGVSRYDECILTAVKSGDVKLWRYK-TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS 164 (444)
Q Consensus 86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 164 (444)
|...|.++++++.+|++++.+|.|++|++. ....+..+..|...|.+++|+|++++|++|+.|+.|++||+++++++..
T Consensus 175 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 175 HQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred CCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 899999999999999999999999999998 4555556778999999999999999999999999999999999998888
Q ss_pred eecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEe--CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152 165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCS--KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241 (444)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 241 (444)
+..+.. .|.+++|+|++ .++++++ .|+.|++||++ ...++..+. +...|.+++|+
T Consensus 255 ~~~~~~------------------~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~---~~~~~~~~~-~~~~v~~~~~s 312 (401)
T 4aez_A 255 KTNHNA------------------AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA---TGARVNTVD-AGSQVTSLIWS 312 (401)
T ss_dssp ECCCSS------------------CCCEEEECTTSTTEEEEECCTTTCEEEEEETT---TCCEEEEEE-CSSCEEEEEEC
T ss_pred ecCCcc------------------eEEEEEECCCCCCEEEEecCCCCCEEEEEECC---CCCEEEEEe-CCCcEEEEEEC
Confidence 877776 79999999977 6666665 79999999999 677777776 56679999999
Q ss_pred cCCCEEEE--EcCCCcEEEEEcCCCCcceeE--eccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 242 NQSHYVIV--GSTTGDMMAVDLRGKGKPCYK--YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 242 ~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~--~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
|++++|++ |+.+|.|++|++.+ +..... +.+|...|++++|+|++++|++++.||.|++|++.+++.+....
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~-~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSS-SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEET-TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred CCCCeEEEEeecCCCcEEEEecCC-ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 99999999 55899999999998 665544 56899999999999999999999999999999999988776543
No 41
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-40 Score=304.21 Aligned_cols=297 Identities=10% Similarity=0.075 Sum_probs=254.2
Q ss_pred cCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCC
Q psy8152 39 ITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKT 116 (444)
Q Consensus 39 ~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~ 116 (444)
.+|...|++++|+ |++++|++|+.||.|++|++.+++.+..+. +|...|.++ +|++++|++++.||.|++|++.+
T Consensus 29 ~~h~~~v~~~~~s-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 29 TGHERPLTQVKYN-KEGDLLFSCSKDSSASVWYSLNGERLGTLD--GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp ECCSSCEEEEEEC-TTSCEEEEEESSSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EEeeceEEEEEEc-CCCCEEEEEeCCCEEEEEeCCCchhhhhhh--hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 3899999999999 799999999999999999999998888775 667777665 67899999999999999999999
Q ss_pred CCccccccccCCCeEEEEEeccCCEEEEeeCC-----CeEEEEEcCCceeeeeeecccc-eeeEeeeCCCcccccCccce
Q psy8152 117 EPDQWTNFNVGPQLECMKHNKHSNIIATGGKE-----NDLKLWDLNTTKNIFSAKNVSH-RVLVYSVKPDEFDLRRPVWV 190 (444)
Q Consensus 117 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i 190 (444)
++.+. ...+...|.+++|+|++++|++++.+ +.|++|++........+..... .+..+.... ....+
T Consensus 106 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 178 (369)
T 3zwl_B 106 GQCVA-TWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE------GLDAA 178 (369)
T ss_dssp CCEEE-EEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT------TCCCE
T ss_pred CcEEE-EeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc------Cccce
Confidence 98886 44489999999999999999999998 9999999987543322221111 011111000 01269
Q ss_pred eEEEEecCCCEEEEEeCCceEEEEEcCCCCC-ccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152 191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQ-RRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY 269 (444)
Q Consensus 191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 269 (444)
.+++|+|++++|++++.+|.|++||++ . ...+..+..|...|.+++|+|++++|++++.|+.|++||+++ ++.+.
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~ 254 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISKYDVS---NNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST-LQVLK 254 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETT---TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEE
T ss_pred eEEEEcCCCCEEEEEcCCCEEEEEECC---CCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC-Cceee
Confidence 999999999999999999999999999 5 678888899999999999999999999999999999999999 89888
Q ss_pred EeccccCceeEEEecCCCCEEEEEECCC--------------cEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccc
Q psy8152 270 KYKGFAGCVKDIACPLNENLILSVSLDR--------------HFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENET 334 (444)
Q Consensus 270 ~~~~h~~~i~~~~~s~~~~~l~s~~~dg--------------~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 334 (444)
.+. +...+.+++|+|+++++++++.++ .|++|++.+++++..+. |...|.+++|+++
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~------- 326 (369)
T 3zwl_B 255 KYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQ------- 326 (369)
T ss_dssp EEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTT-------
T ss_pred eec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCC-------
Confidence 887 778999999999999999999988 89999999999988876 8899999999854
Q ss_pred hhhhhccccccCCCccccCCCcccc
Q psy8152 335 KKEEQEHSEEKGDSDEKYDPEHFEM 359 (444)
Q Consensus 335 ~~~~~~~s~~~d~~i~~W~~~~~~~ 359 (444)
+.++++++.|+.|++|++..+..
T Consensus 327 --~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 327 --GTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp --SSEEEEEETTSEEEEEEECHHHH
T ss_pred --CCEEEEEcCCCeEEEEECccccc
Confidence 57899999999999999986554
No 42
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.4e-40 Score=299.91 Aligned_cols=279 Identities=13% Similarity=0.128 Sum_probs=233.2
Q ss_pred CCCcccEEEecCCCcEEEEEcCCCccce-eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152 3 LADDYNIYIGSSTGAFKGVNLSKDKCII-KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT 81 (444)
Q Consensus 3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~ 81 (444)
+..+++|++|+.||+|+||++...+... .....+. +|...|++++|+ |++.+|++|+.|+.|++|+..........
T Consensus 48 p~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~--~h~~~V~~~~~s-~dg~~l~s~~~d~~i~~~~~~~~~~~~~~ 124 (340)
T 4aow_A 48 PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR--GHSHFVSDVVIS-SDGQFALSGSWDGTLRLWDLTTGTTTRRF 124 (340)
T ss_dssp TTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe--CCCCCEEEEEEC-CCCCEEEEEcccccceEEeecccceeeee
Confidence 4456789999999999999998765311 1122222 899999999999 79999999999999999999888777766
Q ss_pred eeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCC
Q psy8152 82 DVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNT 158 (444)
Q Consensus 82 ~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~ 158 (444)
...........+++.+.+|++++.|+.+++|++....... ....|...+.+++|+++ ..++++++.|+.|++||+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~ 204 (340)
T 4aow_A 125 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 204 (340)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT
T ss_pred cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC
Confidence 5444444455567889999999999999999987654432 45568999999999884 46788999999999999999
Q ss_pred ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152 159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI 238 (444)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~ 238 (444)
++.+..+.+|.. .|++++|+|++++|++|+.|+.|++||++ ...++..+..+ ..|.++
T Consensus 205 ~~~~~~~~~h~~------------------~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~---~~~~~~~~~~~-~~v~~~ 262 (340)
T 4aow_A 205 CKLKTNHIGHTG------------------YLNTVTVSPDGSLCASGGKDGQAMLWDLN---EGKHLYTLDGG-DIINAL 262 (340)
T ss_dssp TEEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTCEEEEEETT---TTEEEEEEECS-SCEEEE
T ss_pred CceeeEecCCCC------------------cEEEEEECCCCCEEEEEeCCCeEEEEEec---cCceeeeecCC-ceEEee
Confidence 999998888877 79999999999999999999999999999 77788777754 579999
Q ss_pred EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec---------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152 239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK---------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK 308 (444)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 308 (444)
+|+|++.++ +++.|+.|++||++. +..+..+. +|...|++++|+|++++|++|+.||.|+||++.+|.
T Consensus 263 ~~~~~~~~~-~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 263 CFSPNRYWL-CAATGPSIKIWDLEG-KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EECSSSSEE-EEEETTEEEEEETTT-TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ecCCCCcee-eccCCCEEEEEECCC-CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 999987654 566799999999998 76665553 688899999999999999999999999999998875
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-40 Score=333.82 Aligned_cols=286 Identities=13% Similarity=0.168 Sum_probs=237.9
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc---cceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN---TNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY 114 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~---~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~ 114 (444)
+|.+.|++|+|+|.++++|++|+.|++|++|++.+.... ....+.+|...|.++ +|++++|++|+.|++|+|||+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 899999999999545689999999999999999764322 112334777777655 789999999999999999999
Q ss_pred CCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 115 KTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 115 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
.+++....+.+|...|.+++|+|++++|++|+.|++|++||+............. .+..+|.+++
T Consensus 460 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~---------------~h~~~v~~~~ 524 (694)
T 3dm0_A 460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGE---------------GHRDWVSCVR 524 (694)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTT---------------SCSSCEEEEE
T ss_pred CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCC---------------CCCCcEEEEE
Confidence 9998888888999999999999999999999999999999987543332221111 1233799999
Q ss_pred EecCC--CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152 195 FLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 195 ~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
|+|++ ..|++++.|++|++||++ .......+.+|...|++++|+|++++|++|+.||.|+|||+++ ++++..+.
T Consensus 525 ~~~~~~~~~l~s~s~d~~v~vwd~~---~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~-~~~~~~~~ 600 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWDKTVKVWNLS---NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE-GKKLYSLE 600 (694)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT-TEEEECCB
T ss_pred EeCCCCcceEEEEeCCCeEEEEECC---CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CceEEEec
Confidence 99987 689999999999999999 7778888999999999999999999999999999999999999 88888887
Q ss_pred cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--------------------CceeEEEEcCCCcccc
Q psy8152 273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--------------------SRLTSILVRSDFSLEN 332 (444)
Q Consensus 273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--------------------~~i~~~~~~~~~~~~~ 332 (444)
. ...|++++|+|++.+|++++ ++.|+|||+.+++++..+... ..+++++|+
T Consensus 601 ~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s------- 671 (694)
T 3dm0_A 601 A-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWS------- 671 (694)
T ss_dssp C-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEEC-------
T ss_pred C-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEc-------
Confidence 4 56899999999998887765 566999999999887765411 124566665
Q ss_pred cchhhhhccccccCCCccccCCC
Q psy8152 333 ETKKEEQEHSEEKGDSDEKYDPE 355 (444)
Q Consensus 333 ~~~~~~~~~s~~~d~~i~~W~~~ 355 (444)
|++.+|++++.||.|++|++.
T Consensus 672 --pdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 672 --ADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --TTSSEEEEEETTSEEEEEEC-
T ss_pred --CCCCEEEEEcCCCeEEEEecc
Confidence 557899999999999999975
No 44
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.6e-40 Score=352.29 Aligned_cols=336 Identities=13% Similarity=0.133 Sum_probs=283.6
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++|+.+|.|++|++.+++. +..+. +|...|++++|+ |++++|++|+.|+.|+|||+.+++.+..+.
T Consensus 625 ~~~~~l~s~~~d~~i~vw~~~~~~~----~~~~~--~h~~~v~~~~~s-~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~- 696 (1249)
T 3sfz_A 625 QDGQRIASCGADKTLQVFKAETGEK----LLDIK--AHEDEVLCCAFS-SDDSYIATCSADKKVKIWDSATGKLVHTYD- 696 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCE----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCE----EEEec--cCCCCEEEEEEe-cCCCEEEEEeCCCeEEEEECCCCceEEEEc-
Confidence 4678999999999999999988874 22333 899999999999 799999999999999999999999888876
Q ss_pred ccccccEEEE--Ee--CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc
Q psy8152 84 SFGEGDIVGV--SR--YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT 159 (444)
Q Consensus 84 ~~~~~~v~~~--s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 159 (444)
+|...|.++ +| ++.++++++.|+.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.++
T Consensus 697 -~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 697 -EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp -CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred -CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 667777665 55 4558999999999999999999988888899999999999999999999999999999999988
Q ss_pred eeeeeeeccc-------------ceeeEeeeCCCcc------------------------cccCccceeEEEEecCCCEE
Q psy8152 160 KNIFSAKNVS-------------HRVLVYSVKPDEF------------------------DLRRPVWVNGISFLPNSDKV 202 (444)
Q Consensus 160 ~~~~~~~~~~-------------~~~~~~~~~~~~~------------------------~~~~~~~i~~~~~~~~~~~l 202 (444)
+....+.... ..+..++++|++. ...+...|.+++|+|++.++
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 855 (1249)
T 3sfz_A 776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLA 855 (1249)
T ss_dssp EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEE
T ss_pred cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEE
Confidence 7665543211 1233444555431 12455679999999999999
Q ss_pred EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC--------------------
Q psy8152 203 AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR-------------------- 262 (444)
Q Consensus 203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~-------------------- 262 (444)
++++.++.|++|++. ....+..+.+|...|++++|+|++++|++++.||.|++|++.
T Consensus 856 ~~~~~dg~v~vwd~~---~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 932 (1249)
T 3sfz_A 856 VIALSQYCVELWNID---SRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE 932 (1249)
T ss_dssp EEECSSSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred EEEeCCCeEEEEEcC---CCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence 999999999999999 788888889999999999999999999999888888888743
Q ss_pred -----------------------------------------------------------CCCcceeEeccccCceeEEEe
Q psy8152 263 -----------------------------------------------------------GKGKPCYKYKGFAGCVKDIAC 283 (444)
Q Consensus 263 -----------------------------------------------------------~~~~~~~~~~~h~~~i~~~~~ 283 (444)
+ ++.+..+.+|...|++++|
T Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~-~~~~~~~~~h~~~v~~l~~ 1011 (1249)
T 3sfz_A 933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN-NRVFSSGVGHKKAVRHIQF 1011 (1249)
T ss_dssp TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT-TSCEEECCCCSSCCCCEEE
T ss_pred CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC-CceeeecccCCCceEEEEE
Confidence 2 3445556689999999999
Q ss_pred cCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccccc
Q psy8152 284 PLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQV 362 (444)
Q Consensus 284 s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~ 362 (444)
+|++++|++++.||.|++|++.+++.+....|...+.+++|.++ ..+++++.|+.+++|++..++....
T Consensus 1012 s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~----------~~l~~~~~dg~v~vwd~~~~~~~~~ 1080 (1249)
T 3sfz_A 1012 TADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQD----------SRLLSWSFDGTVKVWNVITGRIERD 1080 (1249)
T ss_dssp CSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSS----------SEEEEEESSSEEEEEETTTTCCCEE
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCC----------CcEEEEECCCcEEEEECCCCceeEE
Confidence 99999999999999999999999998877779999999999865 4578899999999999987765543
No 45
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-41 Score=324.54 Aligned_cols=318 Identities=8% Similarity=0.013 Sum_probs=232.5
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-----CCcEEEEEEcCCeEEEEeCCCCccc---
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-----EESELLIAYSGQKIKIYDTDFKNFN--- 78 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~~l~~~~~d~~i~vw~~~~~~~~--- 78 (444)
..|++++.|++|+||++.+++........+. .|.+.|++|+|+|. ++.+||+|+.||+|+||++.++...
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~--~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~ 251 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV--HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV 251 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEE--ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEE--ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence 4566678899999999987763211111122 57889999999942 2579999999999999999876432
Q ss_pred ------cceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEE--EEeccC-CEEEEeeC
Q psy8152 79 ------TNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECM--KHNKHS-NIIATGGK 147 (444)
Q Consensus 79 ------~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~ 147 (444)
....+.+|...|.++++ .+..|++|+.||+|++||+.++.. ...+..|...|+++ +|+|++ .+||+|+.
T Consensus 252 ~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 252 FKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp EECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred ceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 11234577888888864 346899999999999999987643 33467899999999 567787 89999999
Q ss_pred CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152 148 ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK 227 (444)
Q Consensus 148 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 227 (444)
|++|+|||+++++++..+.++.. ...|.+++|+|+++.|++++.|++|++||++ ...++.+
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~----------------~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~---~~~~~~~ 392 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFR----------------GSNLVPVVYCPQIYSYIYSDGASSLRAVPSR---AAFAVHP 392 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECS----------------CCSCCCEEEETTTTEEEEECSSSEEEEEETT---CTTCCEE
T ss_pred CCeEEEEECCCCCcccccccccc----------------cCcccceEeCCCcCeEEEeCCCCcEEEEECc---cccccee
Confidence 99999999999877666655432 1137899999999999999999999999999 6777778
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-----ccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152 228 VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-----FAGCVKDIACPLNENLILSVSLDRHFRVH 302 (444)
Q Consensus 228 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----h~~~i~~~~~s~~~~~l~s~~~dg~i~vw 302 (444)
+.+|...|++|+|+|++++|++|+.||+|++|++.. . .+..+.. +...|.+++|+|++..+. ... .+++|
T Consensus 393 l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~-~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~ 467 (524)
T 2j04_B 393 LVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR-R-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVY 467 (524)
T ss_dssp EEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS-S-TTTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCC
T ss_pred eecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH-h-hccccccCccceeeeEEEEeccCCCCCeEE-ccC--Cceec
Confidence 889999999999999999999999999999999875 3 4433321 122577999999998552 222 33344
Q ss_pred EcC-CCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 303 DFH-SKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 303 ~~~-~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
... ++.++..+. |..+|++++|+++. +.+..+++++.+|.||||++..
T Consensus 468 ~~~~~g~~~~~l~gh~~~V~~Vafsp~~------~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 468 PLTVNDVSKAKIDAHGINITCTKWNETS------AGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp C-------------CCCSCCCEEECCST------TTTTEEEEECTTSEEEEEECSC
T ss_pred ccccCCcceeeecCCCceEEEEECCCCC------CccHHHHhhccCceEEEEEccc
Confidence 433 355555554 88999999999772 1245899999999999999764
No 46
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.2e-40 Score=308.32 Aligned_cols=282 Identities=14% Similarity=0.113 Sum_probs=235.1
Q ss_pred CcccceEEEeeeccCC-cEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcC
Q psy8152 40 TNKASVLALNWGNVEE-SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~-~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~ 115 (444)
+|...|++++|+ |++ .+|++|+.||.|+||++.+++....+...+|...|.++ +| ++++|++++.|+.|++|++.
T Consensus 71 ~h~~~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 71 PFDRRVTSLEWH-PTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCSSCEEEEEEC-SSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred CCCCCEEEEEEC-CCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 899999999999 677 89999999999999999988888877666788888776 56 56899999999999999998
Q ss_pred CCCccccccc---cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152 116 TEPDQWTNFN---VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG 192 (444)
Q Consensus 116 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (444)
+.. +..+.. |...|.+++|+|++++|++|+.|+.|++||+ .++++..+..|.. .|.+
T Consensus 150 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~------------------~v~~ 209 (383)
T 3ei3_B 150 GSV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA------------------KVTH 209 (383)
T ss_dssp SCE-EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS------------------CEEE
T ss_pred CCc-eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC------------------cEEE
Confidence 643 333433 4478999999999999999999999999999 5777888887777 7999
Q ss_pred EEEecCCC-EEEEEeCCceEEEEEcCCCCC-ccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152 193 ISFLPNSD-KVAVCSKQGYVRVYDPKITTQ-RRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPCY 269 (444)
Q Consensus 193 ~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~ 269 (444)
++|+|+++ +|++++.|+.|++||++.... ...+..+ .|...|.+++|+| ++++|++++.|+.|++||+++ ++.+.
T Consensus 210 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~-~~~~~ 287 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD-WSKPD 287 (383)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB-TTSCS
T ss_pred EEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC-Ccccc
Confidence 99999998 999999999999999992111 3444444 6899999999999 999999999999999999998 88777
Q ss_pred Eecccc-----------------CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee---cCCceeEEEEcCCCc
Q psy8152 270 KYKGFA-----------------GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY---MQSRLTSILVRSDFS 329 (444)
Q Consensus 270 ~~~~h~-----------------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---~~~~i~~~~~~~~~~ 329 (444)
.+.+|. ..+..++|+|++++ +++.|+.|++||+.+++++..+. +...+..++|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~-- 363 (383)
T 3ei3_B 288 QIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPT-- 363 (383)
T ss_dssp EEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTT--
T ss_pred ccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecC--
Confidence 776543 23344666666665 67789999999999999988876 4566777788854
Q ss_pred ccccchhhhhccccccCCCccccCCCc
Q psy8152 330 LENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 330 ~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
+.++++++ |+.|++|++..
T Consensus 364 -------g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 364 -------GDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp -------SSEEEEEE-TTEEEEEECC-
T ss_pred -------ccEEEEec-CCcEEEEecCC
Confidence 57888886 89999999864
No 47
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-39 Score=310.99 Aligned_cols=300 Identities=12% Similarity=0.221 Sum_probs=255.4
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
++++|++|+.||.|++|++.+++. +..+. +|...|++++|+ +++ +|++|+.||+|++|++.+++.+..+.
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~----~~~~~--~h~~~V~~l~~~-~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~-- 200 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKF----LLQLS--GHDGGVWALKYA-HGG-ILVSGSTDRTVRVWDIKKGCCTHVFE-- 200 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEE----EEEEC--CCSSCEEEEEEC-STT-EEEEEETTSCEEEEETTTTEEEEEEC--
T ss_pred CCCEEEEEcCCCcEEEEECCCCcE----EEEEe--CCCcCEEEEEEc-CCC-EEEEEeCCCCEEEEECCCCcEEEEEC--
Confidence 457899999999999999988874 22233 899999999999 555 99999999999999999998887775
Q ss_pred cccccEEEE--E--eCCCeEEEEecCCcEEEEEcCCCCcc-----------------------ccccccCCCeEEEEEec
Q psy8152 85 FGEGDIVGV--S--RYDECILTAVKSGDVKLWRYKTEPDQ-----------------------WTNFNVGPQLECMKHNK 137 (444)
Q Consensus 85 ~~~~~v~~~--s--~~~~~l~~~~~dg~i~iw~~~~~~~~-----------------------~~~~~~~~~v~~~~~~~ 137 (444)
+|...|.++ + +++.+|++++.|+.|++|++.++... ....+|...|.++ ++
T Consensus 201 ~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 278 (464)
T 3v7d_B 201 GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG 278 (464)
T ss_dssp CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE
T ss_pred CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC
Confidence 667777665 4 46689999999999999999876532 2355677778777 56
Q ss_pred cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152 138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK 217 (444)
Q Consensus 138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 217 (444)
++++|++|+.|+.|++||+++++++..+.+|.. .|++++|+|++++|++|+.|+.|++||++
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD------------------RIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSS------------------CEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC------------------CEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 889999999999999999999999999888777 79999999999999999999999999999
Q ss_pred CCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152 218 ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDR 297 (444)
Q Consensus 218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg 297 (444)
...++..+.+|...|.+++|+ +.+|++++.||.|++||+.+ +.....+. |...+..++|+|++++|++++ ||
T Consensus 341 ---~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg 412 (464)
T 3v7d_B 341 ---NGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND-YSRKFSYH-HTNLSAITTFYVSDNILVSGS-EN 412 (464)
T ss_dssp ---TTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT-CCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TT
T ss_pred ---CCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC-Cceeeeec-CCCCccEEEEEeCCCEEEEec-CC
Confidence 788999999999999999997 57999999999999999998 77666654 667788889999999999988 89
Q ss_pred cEEEEEcCCCceEEEe--ecCCceeEEEEcCCCcccccchhhhhccccccCCCcccc
Q psy8152 298 HFRVHDFHSKKLLRKD--YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKY 352 (444)
Q Consensus 298 ~i~vw~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W 352 (444)
.|++|++.+++++... .+...|.+++|+.. .++++++.++.+.+|
T Consensus 413 ~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~----------~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 413 QFNIYNLRSGKLVHANILKDADQIWSVNFKGK----------TLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEEEEETTTCCEEESCTTTTCSEEEEEEEETT----------EEEEEEEETTEEEEE
T ss_pred eEEEEECCCCcEEehhhccCCCcEEEEEecCC----------EEEEEEEeCCeEEEE
Confidence 9999999999998863 37888999998633 456666677766555
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.4e-40 Score=308.46 Aligned_cols=274 Identities=11% Similarity=0.124 Sum_probs=235.3
Q ss_pred ccEEEecCCCcEEEEEcCCCccce--eeeeeecccCcccceEEEeeeccC----C---cEEEEEEcCCeEEEEeCCCCcc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCII--KNIQNVKYITNKASVLALNWGNVE----E---SELLIAYSGQKIKIYDTDFKNF 77 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~----~---~~l~~~~~d~~i~vw~~~~~~~ 77 (444)
.+|++|+.||.|++|++..++... .....+. +|...|++++|+ |+ + .+|++++.|+.|++|++.+++.
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~-~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~ 103 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF--VHKSGLHHVDVL-QAIERDAFELCLVATTSFSGDLLFYRITREDE 103 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE--CCTTCEEEEEEE-EEEETTTEEEEEEEEEETTSCEEEEEEEECTT
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEe--cCCCcEEEEEEe-cccccCCccccEEEEEcCCCCEEEEEccCCcc
Confidence 789999999999999998876200 0112222 899999999999 67 8 9999999999999999998876
Q ss_pred -----ccceeeccc-----cccEEE--EE----eCCCe-EEEEecCCcEEEEEcCC------CCccc-----cc------
Q psy8152 78 -----NTNTDVSFG-----EGDIVG--VS----RYDEC-ILTAVKSGDVKLWRYKT------EPDQW-----TN------ 123 (444)
Q Consensus 78 -----~~~~~~~~~-----~~~v~~--~s----~~~~~-l~~~~~dg~i~iw~~~~------~~~~~-----~~------ 123 (444)
...+. .| ...|.+ ++ |++++ |++++.+|.|++|++.+ ++.+. .+
T Consensus 104 ~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (397)
T 1sq9_A 104 TKKVIFEKLD--LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES 181 (397)
T ss_dssp TCCEEEEEEC--CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECC
T ss_pred cccccceeec--ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecc
Confidence 55554 44 356654 57 78999 99999999999999998 66664 45
Q ss_pred -cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeec---c---cceeeEeeeCCCcccccCccceeEEEEe
Q psy8152 124 -FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN---V---SHRVLVYSVKPDEFDLRRPVWVNGISFL 196 (444)
Q Consensus 124 -~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 196 (444)
..|...|.+++|+|++ +|++++.++.|++||+++++++..+.. | .. .|++++|+
T Consensus 182 ~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~------------------~i~~i~~~ 242 (397)
T 1sq9_A 182 PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN------------------SIRSVKFS 242 (397)
T ss_dssp SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCC------------------CEEEEEEC
T ss_pred ccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCC------------------ccceEEEC
Confidence 3488999999999999 999999999999999999999988887 5 55 79999999
Q ss_pred cCCCEEEEEeCC---ceEEEEEcCCCCCccceEEEeC-------------CCCCeeEEEEccCCCEEEEEcCCCcEEEEE
Q psy8152 197 PNSDKVAVCSKQ---GYVRVYDPKITTQRRPVLKVDI-------------PDVALSCITTTNQSHYVIVGSTTGDMMAVD 260 (444)
Q Consensus 197 ~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 260 (444)
|++++|++++.| +.|++||++ ...++..+.. |...|.+++|+|++++|++++.||.|++||
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETE---FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETT---TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEecCCCCceEEEEECC---CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 999999999999 999999999 7788888888 899999999999999999999999999999
Q ss_pred cCCCCcceeEec------cc---------------cCceeEEEecCCC----------CEEEEEECCCcEEEEEcCCCc
Q psy8152 261 LRGKGKPCYKYK------GF---------------AGCVKDIACPLNE----------NLILSVSLDRHFRVHDFHSKK 308 (444)
Q Consensus 261 ~~~~~~~~~~~~------~h---------------~~~i~~~~~s~~~----------~~l~s~~~dg~i~vw~~~~~~ 308 (444)
+++ ++++..+. +| ...|++++|+|++ ++|++++.||.|++|++.+++
T Consensus 320 ~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 320 VKT-KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTT-TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cCC-CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 999 99999999 88 9999999999998 799999999999999998763
No 49
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-39 Score=305.65 Aligned_cols=276 Identities=12% Similarity=0.152 Sum_probs=234.4
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF 85 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~ 85 (444)
++.|++|. |++|+||++.+++. .+.+...+|...|++|+|+ |++++|++|+.||.|+||++.+++.+..+. +
T Consensus 116 ~n~lAvgl-d~tV~lWd~~tg~~----~~~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~v~iWd~~~~~~~~~~~--~ 187 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSASSGDI----LQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEVQLWDVQQQKRLRNMT--S 187 (420)
T ss_dssp TSEEEEEE-TTEEEEEETTTCCE----EEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEEC--C
T ss_pred CCEEEEEe-CCEEEEEECCCCCE----EEEEEecCCCCcEEEEEEC-CCCCEEEEEECCCeEEEEEcCCCcEEEEEe--C
Confidence 45677665 89999999999874 1233333788999999999 799999999999999999999999888775 7
Q ss_pred ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee---
Q psy8152 86 GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN--- 161 (444)
Q Consensus 86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~--- 161 (444)
|...+.++++++.+|++|+.++.+++|+...... +..+..|...+..+.|+|++.++++++.|+.|++|++..++.
T Consensus 188 h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~ 267 (420)
T 4gga_A 188 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 267 (420)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC
T ss_pred CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce
Confidence 8999999999999999999999999999876543 345678999999999999999999999999999999987653
Q ss_pred -eeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEE--EeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152 162 -IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAV--CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC 237 (444)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 237 (444)
+.....+.. .|.+++|+|.+ .++++ |+.|++|++||+. ...++..+..+ ..+.+
T Consensus 268 ~~~~~~~~~~------------------~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~---t~~~~~~~~~~-~~v~~ 325 (420)
T 4gga_A 268 PLQTFTQHQG------------------AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC---SGACLSAVDAH-SQVCS 325 (420)
T ss_dssp CSEEECCCSS------------------CEEEEEECTTCTTEEEEEECTTTCEEEEEETT---TTEEEEEEECS-SCEEE
T ss_pred eeeeecccCC------------------ceeeeeeCCCcccEEEEEeecCCCEEEEEeCC---ccccceeeccc-cceee
Confidence 333444444 79999999977 56655 4579999999999 77777777755 45889
Q ss_pred EEEccCCCEEEEEc--CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152 238 ITTTNQSHYVIVGS--TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK 312 (444)
Q Consensus 238 ~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 312 (444)
+.|+|+++.|++++ .|+.|+|||+.+ ++++.++.+|.+.|++++|+|++++|+||+.|++|+||++....+..+
T Consensus 326 ~~~~~~~~~lv~~sg~~d~~I~iwd~~~-~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 326 ILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred eeecCCCCeEEEEEecCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 99999999888754 799999999999 999999999999999999999999999999999999999987655443
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.8e-39 Score=294.22 Aligned_cols=273 Identities=11% Similarity=0.204 Sum_probs=234.6
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++++ +|.|++|++.++.. ...+..+...+|...|++++|+ |++++|++++.|+.|++|++.+++.......
T Consensus 61 ~~~~~l~~~~-dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 137 (337)
T 1gxr_A 61 NPTRHVYTGG-KGCVKVWDISHPGN-KSPVSQLDCLNRDNYIRSCKLL-PDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137 (337)
T ss_dssp SSSSEEEEEC-BSEEEEEETTSTTC-CSCSEEEECSCTTSBEEEEEEC-TTSSEEEEEESSSEEEEEECCCC--EEEEEE
T ss_pred cCCcEEEEcC-CCeEEEEECCCCCc-eeeeecccccCCCCcEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCCcceeeec
Confidence 4567788888 99999999987764 2223333333789999999999 7999999999999999999998875444444
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
..|...+.++ +|++++|++++.++.|++|++.+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 138 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 217 (337)
T 1gxr_A 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ 217 (337)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce
Confidence 5677777655 67899999999999999999999988877778999999999999999999999999999999999888
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 241 (444)
+..+... . .+.+++|+|++++|++++.++.|++|+++ ... ...+..|...|.+++|+
T Consensus 218 ~~~~~~~-~------------------~v~~~~~s~~~~~l~~~~~~~~i~~~~~~---~~~-~~~~~~~~~~v~~~~~~ 274 (337)
T 1gxr_A 218 LQQHDFT-S------------------QIFSLGYCPTGEWLAVGMESSNVEVLHVN---KPD-KYQLHLHESCVLSLKFA 274 (337)
T ss_dssp EEEEECS-S------------------CEEEEEECTTSSEEEEEETTSCEEEEETT---SSC-EEEECCCSSCEEEEEEC
T ss_pred EeeecCC-C------------------ceEEEEECCCCCEEEEEcCCCcEEEEECC---CCC-eEEEcCCccceeEEEEC
Confidence 7776432 3 59999999999999999999999999999 333 45678899999999999
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
|++++|++++.+|.|++|++.+ ++.+... .|...|++++|+|++++|++++.||.|++|++
T Consensus 275 ~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 275 YCGKWFVSTGKDNLLNAWRTPY-GASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTT-CCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEecCCCcEEEEECCC-CeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999999999999999999998 8777554 48889999999999999999999999999996
No 51
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.6e-41 Score=317.47 Aligned_cols=290 Identities=13% Similarity=0.120 Sum_probs=231.1
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKT 116 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~ 116 (444)
+|...|+||+|+|.++++||+|+.||.|+|||+.+++....+...+|...|.++ +| ++.+|++|+.||+|++||+.+
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 688899999999546789999999999999999988777666666888888776 55 578999999999999999987
Q ss_pred CCcccccc--ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 117 EPDQWTNF--NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 117 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
+....... .+...+.+++|+|++.+|++|+.||.|++||++ ++.+..+..|.. .|++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~------------------~v~~v~ 257 (435)
T 4e54_B 197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKK------------------KVTHVA 257 (435)
T ss_dssp CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSS------------------CEEEEE
T ss_pred CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccc------------------eEEeee
Confidence 65442222 234567899999999999999999999999986 456667777766 799999
Q ss_pred EecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc
Q psy8152 195 FLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG 273 (444)
Q Consensus 195 ~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 273 (444)
|+|++ .+|++++.|+.|++||++.......+....+|...|++++|+|++++|++++.||.|+|||+.+ +.....+..
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~-~~~~~~~~~ 336 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ-WDCPLGLIP 336 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS-SSSEEEECC
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCC-CccceEEec
Confidence 99998 5788999999999999982222223334457889999999999999999999999999999999 888777766
Q ss_pred ccC------ceeEEEecCCCCEEEEEEC------------CCcEEEEEcCCCceEEEee--cCCceeEE-EEcCCCcccc
Q psy8152 274 FAG------CVKDIACPLNENLILSVSL------------DRHFRVHDFHSKKLLRKDY--MQSRLTSI-LVRSDFSLEN 332 (444)
Q Consensus 274 h~~------~i~~~~~s~~~~~l~s~~~------------dg~i~vw~~~~~~~~~~~~--~~~~i~~~-~~~~~~~~~~ 332 (444)
|.. .+..+.|+|++.++++++. ++.|++|++.+++++..+. |...|.++ +|+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fs------- 409 (435)
T 4e54_B 337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFN------- 409 (435)
T ss_dssp CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEEC-------
T ss_pred ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEEC-------
Confidence 542 2345577887777776642 3579999999999988875 66778877 466
Q ss_pred cchhhhhccccccCCCccccCCCcccc
Q psy8152 333 ETKKEEQEHSEEKGDSDEKYDPEHFEM 359 (444)
Q Consensus 333 ~~~~~~~~~s~~~d~~i~~W~~~~~~~ 359 (444)
|++.+|++++ |+.|+||++..++.
T Consensus 410 --pdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 410 --PMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp --TTSSCEEEEC-SSEEEECCCC----
T ss_pred --CCCCEEEEEc-CCcEEEEECCcCee
Confidence 4467888776 78999999987654
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.1e-41 Score=308.89 Aligned_cols=283 Identities=9% Similarity=0.097 Sum_probs=239.3
Q ss_pred CcccceEEEeeecc---CCcEEEEEEcCCeEEEEeCCCCccccceeecc---ccccEEE--EEeC----CCeEEEEecCC
Q psy8152 40 TNKASVLALNWGNV---EESELLIAYSGQKIKIYDTDFKNFNTNTDVSF---GEGDIVG--VSRY----DECILTAVKSG 107 (444)
Q Consensus 40 ~h~~~v~~~~~~~~---~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~---~~~~v~~--~s~~----~~~l~~~~~dg 107 (444)
+|..+|++++|+|. ....+++++.++.|++|++.+++.+..+..+. |...|.+ ++|+ +.+|++++.||
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 79999999999941 35667777778899999999888776665332 4455655 5677 56899999999
Q ss_pred cEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeee---ecccceeeEeeeCCCccc
Q psy8152 108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSA---KNVSHRVLVYSVKPDEFD 183 (444)
Q Consensus 108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 183 (444)
.|++|++.+++.+..+..|...|.+++|+| ++.+|++++.||.|++||+++++.+..+ ..+..
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~------------- 162 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD------------- 162 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS-------------
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC-------------
Confidence 999999999998887778999999999999 9999999999999999999999888877 44555
Q ss_pred ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceE----------------------------EEeCCCCCe
Q psy8152 184 LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVL----------------------------KVDIPDVAL 235 (444)
Q Consensus 184 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------------------------~~~~~~~~i 235 (444)
.|++++|+|++++|++++.|+.|++||++ ....+. ....|...|
T Consensus 163 -----~v~~~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 234 (366)
T 3k26_A 163 -----EVLSADYDLLGEKIMSCGMDHSLKLWRIN---SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYV 234 (366)
T ss_dssp -----CEEEEEECTTSSEEEEEETTSCEEEEESC---SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCC
T ss_pred -----ceeEEEECCCCCEEEEecCCCCEEEEECC---CCccccccceeEEecCCCCcccccceeeccCccccccCCcceE
Confidence 79999999999999999999999999998 443332 223488999
Q ss_pred eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc--------------eeEeccccCceeEEEecCC--CCEEEEEECCCcE
Q psy8152 236 SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP--------------CYKYKGFAGCVKDIACPLN--ENLILSVSLDRHF 299 (444)
Q Consensus 236 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--------------~~~~~~h~~~i~~~~~s~~--~~~l~s~~~dg~i 299 (444)
.+++|+ +++|++++.++.|++||+.+ ... +..+.+|...|++++|+|+ +++|++++.||.|
T Consensus 235 ~~~~~~--~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i 311 (366)
T 3k26_A 235 DCVRWL--GDLILSKSCENAIVCWKPGK-MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL 311 (366)
T ss_dssp CEEEEE--TTEEEEECSSSEEEEEEESS-TTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCE
T ss_pred EEEEEc--CCEEEEEecCCEEEEEeCCC-ccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcE
Confidence 999998 77999999999999999987 543 7778889999999999999 9999999999999
Q ss_pred EEEEcCCCceE----EEee-c--CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152 300 RVHDFHSKKLL----RKDY-M--QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE 355 (444)
Q Consensus 300 ~vw~~~~~~~~----~~~~-~--~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~ 355 (444)
++|++.+++++ ..+. | ...|.+++|+++ +.++++++.|+.|++|++.
T Consensus 312 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 312 YVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD---------SSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTT---------SSEEEEEETTSEEEEEEC-
T ss_pred EEEECCCCCCccccceEEcccccCCceEEEEeCCC---------CCeEEEEeCCCEEEEEEec
Confidence 99999987543 2443 4 688999999854 5789999999999999975
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1e-40 Score=314.42 Aligned_cols=281 Identities=11% Similarity=0.078 Sum_probs=240.8
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT 122 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 122 (444)
..+++++|+ |++++|++++.|+.|++|++.+++....+..+ ....+..+++++++|++++.+|.|++|++.+++....
T Consensus 57 ~~~~~~~~s-~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 134 (420)
T 3vl1_A 57 DAGKGNTFE-KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREI 134 (420)
T ss_dssp BCCTTCEEE-EEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEE
T ss_pred ccccceeee-ecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeee
Confidence 445689999 79999999999999999999988887776532 1223334578999999999999999999999888876
Q ss_pred ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE
Q psy8152 123 NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV 202 (444)
Q Consensus 123 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 202 (444)
+..|...|++++|+|++++|++|+.|+.|++||+.+++.+..+..|.. .|++++|+|++++|
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA------------------TVTDIAIIDRGRNV 196 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS------------------CEEEEEEETTTTEE
T ss_pred cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC------------------cEEEEEEcCCCCEE
Confidence 678999999999999999999999999999999999998888888777 89999999999999
Q ss_pred EEEeCCceEEEEEcCCCCCccceEEEeCC------------------------CCCeeEEEEccCCCEEEEEcCCCcEEE
Q psy8152 203 AVCSKQGYVRVYDPKITTQRRPVLKVDIP------------------------DVALSCITTTNQSHYVIVGSTTGDMMA 258 (444)
Q Consensus 203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------------------------~~~i~~~~~~~~~~~l~~~~~dg~i~i 258 (444)
++++.|+.|++||++ ..+.+..+..+ ...+.+++|+|++++|++|+.+|.|++
T Consensus 197 ~s~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 273 (420)
T 3vl1_A 197 LSASLDGTIRLWECG---TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV 273 (420)
T ss_dssp EEEETTSCEEEEETT---TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred EEEcCCCcEEEeECC---CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence 999999999999999 67777777642 244555666889999999999999999
Q ss_pred EEcCCCCcceeEec-cccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCce-EEEee--cCCceeEEEEcCCCccccc
Q psy8152 259 VDLRGKGKPCYKYK-GFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKKL-LRKDY--MQSRLTSILVRSDFSLENE 333 (444)
Q Consensus 259 wd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~~-~~~~~--~~~~i~~~~~~~~~~~~~~ 333 (444)
||+++ ++.+..+. .|...|++++|+|+++ +|++++.||.|++||+.+++. +..+. +...+.++.+.+
T Consensus 274 ~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~------- 345 (420)
T 3vl1_A 274 HNVFS-KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAA------- 345 (420)
T ss_dssp EETTT-CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEET-------
T ss_pred EECCC-CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCC-------
Confidence 99999 77777665 5889999999999998 999999999999999998754 55544 667788886542
Q ss_pred chhhhhccccccCCCccccCCCcc
Q psy8152 334 TKKEEQEHSEEKGDSDEKYDPEHF 357 (444)
Q Consensus 334 ~~~~~~~~s~~~d~~i~~W~~~~~ 357 (444)
+.++++++.|+.|++|++...
T Consensus 346 ---~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 346 ---GALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp ---TEEEEEETTTEEEEEEEECCT
T ss_pred ---CCEEEEecCCccEEEEeccCC
Confidence 368999999999999998763
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.8e-41 Score=309.21 Aligned_cols=288 Identities=13% Similarity=0.120 Sum_probs=242.8
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc--cccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN--FNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~ 115 (444)
.|..+|++++|+ |++++|++|+.++.|++|++.+++ ....+. +|...|.++ +|++++|++++.|+.|++|++.
T Consensus 6 ~~~~~i~~~~~s-~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 6 FLVEPISCHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp SCSSCCCEEEEC-TTSSEEEEECSSSEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ccCCCeEEEEEC-CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 488999999999 799999999999999999999887 555554 677777655 7889999999999999999998
Q ss_pred CCCccc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee---eeee-ecccceeeEeeeCCCcccccCccc
Q psy8152 116 TEPDQW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN---IFSA-KNVSHRVLVYSVKPDEFDLRRPVW 189 (444)
Q Consensus 116 ~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 189 (444)
+++... ....|...|.+++|+|++++|++++.++.|++|++..+.. ...+ ..|.. .
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~------------------~ 144 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS------------------T 144 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS------------------C
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC------------------C
Confidence 886443 3466899999999999999999999999999999988653 2222 23333 7
Q ss_pred eeEEEEecCCCEEEEEeCCceEEEEEcCC---------------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152 190 VNGISFLPNSDKVAVCSKQGYVRVYDPKI---------------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG 254 (444)
Q Consensus 190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 254 (444)
|++++|+|++++|++++.|+.|++||++. .....++..+..|...|.+++|+|++++|++++.|+
T Consensus 145 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 224 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 224 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT
T ss_pred eeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC
Confidence 99999999999999999999999999641 014567777888999999999999999999999999
Q ss_pred cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC--Cce-----------------------
Q psy8152 255 DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS--KKL----------------------- 309 (444)
Q Consensus 255 ~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~--~~~----------------------- 309 (444)
.|++||+++ ++++..+..|..+|++++|+|++.+|+++ .|+.|++|++.+ ++.
T Consensus 225 ~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (372)
T 1k8k_C 225 TVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 302 (372)
T ss_dssp EEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHH
T ss_pred EEEEEECCC-CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhh
Confidence 999999999 99999999999999999999999988877 999999999987 421
Q ss_pred ---------E------EEe--ecCCceeEEEEcCCCcccccchhh---hhccccccCCCccccCCCccc
Q psy8152 310 ---------L------RKD--YMQSRLTSILVRSDFSLENETKKE---EQEHSEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 310 ---------~------~~~--~~~~~i~~~~~~~~~~~~~~~~~~---~~~~s~~~d~~i~~W~~~~~~ 358 (444)
. ..+ .|..+|++++|.+. ++ .+++|++.||.|++|++...+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--------~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 303 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSG--------GKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp HHCCCCC---------CCCSSSSSSCEEEEEEEES--------TTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred hhcccccccccCccccccccccccCCcceeEEecC--------CCcceeeEEEecCCCceEEEEecChh
Confidence 0 122 47889999987532 23 689999999999999987644
No 55
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-40 Score=335.60 Aligned_cols=337 Identities=12% Similarity=0.075 Sum_probs=253.3
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc-----
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN----- 80 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~----- 80 (444)
+.+|++++.|+.|++|++.+++. +..+ .|...|++++|+ |++++|++|+.||.|++||+.++++...
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~----~~~~---~~~~~V~~v~~s-p~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~ 140 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKV----LTTV---FVPGKITSIDTD-ASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNL 140 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSE----EEEE---ECSSCEEEEECC-TTCSEEEEEETTSCEEEEETTTTEEEEEEECCH
T ss_pred CCEEEEEECcCeEEEEECCCCcE----EEEE---cCCCCEEEEEEC-CCCCEEEEEcCCCcEEEEECCCCccccceeccc
Confidence 45799999999999999988764 1222 367899999999 7999999999999999999988775310
Q ss_pred ----eeeccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCCCCcccccccc------------------CCCeEEEEE
Q psy8152 81 ----TDVSFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKTEPDQWTNFNV------------------GPQLECMKH 135 (444)
Q Consensus 81 ----~~~~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------------------~~~v~~~~~ 135 (444)
....+|..+|.++ +|+ +.+|++|+.++.| +||+.+++++..+..| ...|++++|
T Consensus 141 ~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 141 QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp HHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred cccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 1124566777665 564 4689999999999 9999988776544433 578999999
Q ss_pred eccCCEEEEeeCCCeEEEEEcCCceeeee--ee---cc-------------cceeeEeee----CCC-------------
Q psy8152 136 NKHSNIIATGGKENDLKLWDLNTTKNIFS--AK---NV-------------SHRVLVYSV----KPD------------- 180 (444)
Q Consensus 136 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~--~~---~~-------------~~~~~~~~~----~~~------------- 180 (444)
+|++.+|++|+.||.|++||+++++++.. +. .+ ...+..+++ +|+
T Consensus 220 spdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~ 299 (902)
T 2oaj_A 220 HPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISR 299 (902)
T ss_dssp CTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTT
T ss_pred cCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCC
Confidence 99999999999999999999988765432 10 00 111111111 000
Q ss_pred --------------------------------------------------------------------------c----c
Q psy8152 181 --------------------------------------------------------------------------E----F 182 (444)
Q Consensus 181 --------------------------------------------------------------------------~----~ 182 (444)
+ +
T Consensus 300 ~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~ 379 (902)
T 2oaj_A 300 GDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETM 379 (902)
T ss_dssp SSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEE
T ss_pred CCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEE
Confidence 0 0
Q ss_pred cc------c-----------CccceeEE----------------------------------EEecCCCEEEEEeCCceE
Q psy8152 183 DL------R-----------RPVWVNGI----------------------------------SFLPNSDKVAVCSKQGYV 211 (444)
Q Consensus 183 ~~------~-----------~~~~i~~~----------------------------------~~~~~~~~l~~~~~d~~i 211 (444)
+. . +...|+++ +|+|++++|++|+.|++|
T Consensus 380 ~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtV 459 (902)
T 2oaj_A 380 LYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSV 459 (902)
T ss_dssp ETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEE
T ss_pred ECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcE
Confidence 00 0 00123333 346788899999999999
Q ss_pred EEEEcCCCCCcc--ceEEE--e-----CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC-----------------
Q psy8152 212 RVYDPKITTQRR--PVLKV--D-----IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG----------------- 265 (444)
Q Consensus 212 ~i~d~~~~~~~~--~~~~~--~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----------------- 265 (444)
++||+. ..... ....+ . +|...|.+++|+|++++||+|+.||+|+||++.+ +
T Consensus 460 rlWd~~-~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~-~~~~~~~~~~~~~~~~~~ 537 (902)
T 2oaj_A 460 RIYDAS-HGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEV-NQFYSVENRPESGDLEMN 537 (902)
T ss_dssp EEEESS-CCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEE-CCC---------------
T ss_pred EEEECC-CccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecC-ccccCccccCCCccccee
Confidence 999998 22211 11221 1 7888999999999999999999999999999986 4
Q ss_pred ----------------------------cceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE-----
Q psy8152 266 ----------------------------KPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK----- 312 (444)
Q Consensus 266 ----------------------------~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~----- 312 (444)
+++..+.+|.+.|++|+|+|+| +||+|+.|++|+|||+.++.++..
T Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~ 616 (902)
T 2oaj_A 538 FRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIRE 616 (902)
T ss_dssp CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG
T ss_pred eeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhH
Confidence 2367788999999999999999 999999999999999988877642
Q ss_pred e--ecCCceeEEEEc-----CCCcccccchhhhhccccccCCCccccCC---Cccccc
Q psy8152 313 D--YMQSRLTSILVR-----SDFSLENETKKEEQEHSEEKGDSDEKYDP---EHFEMN 360 (444)
Q Consensus 313 ~--~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~s~~~d~~i~~W~~---~~~~~~ 360 (444)
+ .|...|++++|+ ++- +++.++++++.|++|++|++ .+++..
T Consensus 617 ~~~gh~~~V~sv~Fs~~~~~~Dg------~~~~~l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 617 ISGAQSACVTCIEFVIMEYGDDG------YSSILMVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp TCSSCCCCEEEEEEEEEECTTSS------SEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred hccccccceEEEEEEEEecCCCC------CcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence 1 467779999998 441 22478999999999999998 454443
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-40 Score=308.94 Aligned_cols=318 Identities=14% Similarity=0.142 Sum_probs=249.5
Q ss_pred CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCc-EEEEEEcCCeEEEEeC----CCCc------cccceee
Q psy8152 15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEES-ELLIAYSGQKIKIYDT----DFKN------FNTNTDV 83 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~----~~~~------~~~~~~~ 83 (444)
...+.+|++.... ..+....|...|++++|+ |++. +|++|+.|+.|++|++ .+++ ....+..
T Consensus 24 ~~~~~~~~~~~~~------~~~~~~~~~~~v~~~~~s-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 1r5m_A 24 NSIDSSDDLDGFV------KILKEIVKLDNIVSSTWN-PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH 96 (425)
T ss_dssp ----------CCC------EECEEEEECSCCSEEEEC-SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC
T ss_pred ccccccccchhhh------hheeeeeccCceEEEEEC-CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccc
Confidence 3345667665443 333333678999999999 7888 9999999999999999 8777 2333321
Q ss_pred --c------cccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152 84 --S------FGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKL 153 (444)
Q Consensus 84 --~------~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 153 (444)
. +|...|.++ +|++++|++++.+|.|++|+ .+++.+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus 97 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 175 (425)
T 1r5m_A 97 PFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTIL 175 (425)
T ss_dssp CCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred cccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEE
Confidence 1 145566655 68899999999999999999 566666677889999999999999999999999999999
Q ss_pred EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152 154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV 233 (444)
Q Consensus 154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 233 (444)
||+.+++.+..+..+........... .......+.+++|+|+ ..+++++.++.|++||++ ...++..+..|..
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~---~~~~~~~~~~~~~ 248 (425)
T 1r5m_A 176 WNVISGTVMQHFELKETGGSSINAEN---HSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQIT---EKTPTGKLIGHHG 248 (425)
T ss_dssp EETTTTEEEEEECCC------------------CCCBSCCEEEET-TEEEEECGGGCEEEEETT---CSSCSEEECCCSS
T ss_pred EECCCCcEEEEeeccccCccceeecc---ccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcC---CCceeeeeccCCC
Confidence 99999988887766554100000000 0000112889999997 568899999999999999 7788888889999
Q ss_pred CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe
Q psy8152 234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD 313 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~ 313 (444)
.|.+++|+|++++|++++.++.|++||+++ ++++..+.+|...|.+++|+|++ +|++++.|+.|++|++.+++++..+
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 999999999999999999999999999999 99999999999999999999999 9999999999999999999988887
Q ss_pred e-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152 314 Y-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 314 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~ 358 (444)
. |...+.+++|+++ +.++++++.|+.|++|++....
T Consensus 327 ~~~~~~i~~~~~s~~---------~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 327 IVDGVPIFAGRISQD---------GQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp ECTTCCEEEEEECTT---------SSEEEEEETTSCEEEEECHHHH
T ss_pred ccCCccEEEEEEcCC---------CCEEEEEECCCeEEEEECCCCc
Confidence 6 7889999998854 5789999999999999998765
No 57
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-39 Score=289.60 Aligned_cols=278 Identities=14% Similarity=0.149 Sum_probs=241.7
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
+|...|++++| +++.+|++|+.||.|++|++.+++....+. .|...|.+ ++|++++|++++.++.|++|++...
T Consensus 16 ~h~~~v~~~~~--~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 16 GHDQDVRDVVA--VDDSKVASVSRDGTVRLWSKDDQWLGTVVY--TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp CCSSCEEEEEE--EETTEEEEEETTSEEEEEEESSSEEEEEEE--ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC
T ss_pred CCCCCcEEEEe--cCCCEEEEEEcCCcEEEEECCCCEEEEEee--cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec
Confidence 89999999999 378899999999999999999888777776 44556654 5789999999999999999998765
Q ss_pred ---CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 118 ---PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 118 ---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
+....+..|...|.+++| ++++|++++.|+.|++|| .++.+..+..+.. .+.+++
T Consensus 92 ~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~------------------~v~~~~ 149 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA------------------SVWDAK 149 (313)
T ss_dssp TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS------------------CEEEEE
T ss_pred CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC------------------ceeEEE
Confidence 445467779999999999 578999999999999999 6677777777776 799999
Q ss_pred Eec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152 195 FLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 195 ~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
|+| ++++|++++.|+.|++||.. .....+.. |...+.+++|+|++. |++++.+|.|++||+++ ++++..+.
T Consensus 150 ~~~~~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~-~~~~~~~~ 222 (313)
T 3odt_A 150 VVSFSENKFLTASADKTIKLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT-GDVLRTYE 222 (313)
T ss_dssp EEETTTTEEEEEETTSCEEEEETT-----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT-CCEEEEEE
T ss_pred EccCCCCEEEEEECCCCEEEEecC-----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc-hhhhhhhh
Confidence 998 88999999999999999954 45555666 888999999999998 89999999999999999 99999999
Q ss_pred cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccc
Q psy8152 273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEK 351 (444)
Q Consensus 273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~ 351 (444)
+|...|++++|+|++ .|++++.||.|++|++.+++++..+. +...|.+++|+++ +. +++++.|+.|++
T Consensus 223 ~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~---------~~-~~~~~~dg~i~i 291 (313)
T 3odt_A 223 GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN---------GD-IIVGSSDNLVRI 291 (313)
T ss_dssp CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT---------SC-EEEEETTSCEEE
T ss_pred cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC---------CC-EEEEeCCCcEEE
Confidence 999999999999999 68999999999999999999988876 6778999999865 33 667999999999
Q ss_pred cCCCcccccc
Q psy8152 352 YDPEHFEMNQ 361 (444)
Q Consensus 352 W~~~~~~~~~ 361 (444)
|++..++...
T Consensus 292 w~~~~~~~~~ 301 (313)
T 3odt_A 292 FSQEKSRWAS 301 (313)
T ss_dssp EESCGGGCCC
T ss_pred EeCCCCceee
Confidence 9998766543
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.2e-40 Score=303.00 Aligned_cols=288 Identities=13% Similarity=0.167 Sum_probs=233.2
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccC----CcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVE----ESELLIAYSGQKIKIYDTDFKNFNTN 80 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~~l~~~~~d~~i~vw~~~~~~~~~~ 80 (444)
....+++++.++.|++|++.+++. ...++......|...|++++|+ |+ +.+|++|+.||.|++|++.+++.+..
T Consensus 33 ~~~~~~~~~~~~~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 110 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQGE-IRLLQSYVDADADENFYTCAWT-YDSNTSHPLLAVAGSRGIIRIINPITMQCIKH 110 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEE-ECTTTCCEEEEEEETTCEEEEECTTTCCEEEE
T ss_pred CCceEEEECCCCEEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEec-cCCCCCCCEEEEecCCCEEEEEEchhceEeee
Confidence 345677888888999999987765 3344444433588999999999 56 67999999999999999999988887
Q ss_pred eeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCCCCccccc---cccCCCeEEEEEeccCCEEEEeeCCCeEEEE
Q psy8152 81 TDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKTEPDQWTN---FNVGPQLECMKHNKHSNIIATGGKENDLKLW 154 (444)
Q Consensus 81 ~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 154 (444)
+. +|...|.++ +| ++.+|++++.||.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||.|++|
T Consensus 111 ~~--~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 188 (366)
T 3k26_A 111 YV--GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188 (366)
T ss_dssp EE--SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ec--CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence 75 667777665 56 7899999999999999999998887655 5799999999999999999999999999999
Q ss_pred EcCCceeeeeeecccceeeEeeeCCC----------------cccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC
Q psy8152 155 DLNTTKNIFSAKNVSHRVLVYSVKPD----------------EFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI 218 (444)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 218 (444)
|+++++.+..+.... .+.|+ .....+...|.+++|+ +++|++++.|+.|++||++
T Consensus 189 d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~- 259 (366)
T 3k26_A 189 RINSKRMMNAIKESY------DYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPG- 259 (366)
T ss_dssp ESCSHHHHHHHHHHH------TCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEES-
T ss_pred ECCCCccccccceeE------EecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCC-
Confidence 999876554433200 00000 0011134579999998 6899999999999999998
Q ss_pred CCCc------------cceEEEeCCCCCeeEEEEccC--CCEEEEEcCCCcEEEEEcCCCCccee----Eeccc--cCce
Q psy8152 219 TTQR------------RPVLKVDIPDVALSCITTTNQ--SHYVIVGSTTGDMMAVDLRGKGKPCY----KYKGF--AGCV 278 (444)
Q Consensus 219 ~~~~------------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~h--~~~i 278 (444)
.... ..+..+..|...|++++|+|+ +++|++|+.||.|++||+.. ++++. .+.+| ...|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v 338 (366)
T 3k26_A 260 KMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV-EDPHKAKCTTLTHHKCGAAI 338 (366)
T ss_dssp STTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS-SSGGGCEEEEECCTTCCSCE
T ss_pred CccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC-CCCccccceEEcccccCCce
Confidence 2111 347778889999999999999 99999999999999999998 76443 67777 7899
Q ss_pred eEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 279 KDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 279 ~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
++++|+|++++|++++.||.|++|++.+
T Consensus 339 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 339 RQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999999999999999999999853
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=300.57 Aligned_cols=275 Identities=14% Similarity=0.162 Sum_probs=225.9
Q ss_pred CCcccEEEecC---CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccC---CcEEEEEEcCCeEEEEeCCCCc-
Q psy8152 4 ADDYNIYIGSS---TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVE---ESELLIAYSGQKIKIYDTDFKN- 76 (444)
Q Consensus 4 ~~~~~l~~g~~---dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~~l~~~~~d~~i~vw~~~~~~- 76 (444)
....++++|+. +|.|++|++.+++. ......+|...|++++|+ |+ +.+|++|+.||.|++|++.+++
T Consensus 29 ~~~~l~~~~s~~~~d~~v~iw~~~~~~~-----~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 102 (357)
T 3i2n_A 29 CSAKFVTMGNFARGTGVIQLYEIQHGDL-----KLLREIEKAKPIKCGTFG-ATSLQQRYLATGDFGGNLHIWNLEAPEM 102 (357)
T ss_dssp TSSEEEEEEC--CCCEEEEEEEECSSSE-----EEEEEEEESSCEEEEECT-TCCTTTCCEEEEETTSCEEEECTTSCSS
T ss_pred CCceEEEecCccCCCcEEEEEeCCCCcc-----cceeeecccCcEEEEEEc-CCCCCCceEEEecCCCeEEEEeCCCCCc
Confidence 34456677776 99999999998773 222233789999999999 56 6999999999999999999887
Q ss_pred cccceeeccccccEEEE--------EeCCCeEEEEecCCcEEEEEcCCCC-ccccccccCC----CeEEEE----EeccC
Q psy8152 77 FNTNTDVSFGEGDIVGV--------SRYDECILTAVKSGDVKLWRYKTEP-DQWTNFNVGP----QLECMK----HNKHS 139 (444)
Q Consensus 77 ~~~~~~~~~~~~~v~~~--------s~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~----~v~~~~----~~~~~ 139 (444)
....+. +|...|.++ +|++++|++++.|+.|++|++.+++ .+..+..|.. .|.+++ |+|++
T Consensus 103 ~~~~~~--~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 180 (357)
T 3i2n_A 103 PVYSVK--GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE 180 (357)
T ss_dssp CSEEEC--CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC
T ss_pred cEEEEE--ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC
Confidence 665554 778888776 5788999999999999999999886 4544444443 899998 67899
Q ss_pred CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec---CCCEEEEEeCCceEEEEEc
Q psy8152 140 NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP---NSDKVAVCSKQGYVRVYDP 216 (444)
Q Consensus 140 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~ 216 (444)
++|++++.++.|++||+++++.... ..+.. .|.+++|+| ++.+|++++.|+.|++||+
T Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~------------------~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 181 RVVCAGYDNGDIKLFDLRNMALRWE-TNIKN------------------GVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEE-EECSS------------------CEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CEEEEEccCCeEEEEECccCceeee-cCCCC------------------ceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 9999999999999999999887544 33444 699999999 8999999999999999999
Q ss_pred CCCCCccceEEE-----eCCCCCeeEEEEccCCC-EEEEEcCCCcEEEEEcCCCC-------------------cceeEe
Q psy8152 217 KITTQRRPVLKV-----DIPDVALSCITTTNQSH-YVIVGSTTGDMMAVDLRGKG-------------------KPCYKY 271 (444)
Q Consensus 217 ~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~-------------------~~~~~~ 271 (444)
+ ...++..+ ..|...|++++|+|+++ +|++++.||.|++||++. + +++..+
T Consensus 242 ~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 242 R---TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY-PIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp E---EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC-CSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred c---CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC-CcccccccCCCCccccccccceeecc
Confidence 8 45444444 38999999999999998 899999999999999986 3 356778
Q ss_pred ccccCceeEEEecCCCCEEE-EEECCCcEEEEEcCCCce
Q psy8152 272 KGFAGCVKDIACPLNENLIL-SVSLDRHFRVHDFHSKKL 309 (444)
Q Consensus 272 ~~h~~~i~~~~~s~~~~~l~-s~~~dg~i~vw~~~~~~~ 309 (444)
.+|...|++++|+|++++|+ +++.||.|++|++.+.++
T Consensus 318 ~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 318 TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 89999999999999999888 899999999999987654
No 60
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=332.82 Aligned_cols=327 Identities=10% Similarity=0.042 Sum_probs=248.1
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+||+|+.||.|++|+....+. +..+.|..+|++++|+ | +.+|++++.|++|+|||+.+++++..+.
T Consensus 27 pdg~~lAsgs~Dg~I~lw~~~~~~~-------~~~~~~~~~V~~l~fs-p-g~~L~S~s~D~~v~lWd~~~~~~~~~~~- 96 (902)
T 2oaj_A 27 FTQNLLAIATVTGEVHIYGQQQVEV-------VIKLEDRSAIKEMRFV-K-GIYLVVINAKDTVYVLSLYSQKVLTTVF- 96 (902)
T ss_dssp TTTTEEEEEETTSEEEEECSTTCEE-------EEECSSCCCEEEEEEE-T-TTEEEEEETTCEEEEEETTTCSEEEEEE-
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcEE-------EEEcCCCCCEEEEEEc-C-CCEEEEEECcCeEEEEECCCCcEEEEEc-
Confidence 4568999999999999999766542 2223688999999999 5 7799999999999999999998887774
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcc-----------ccccccCCCeEEEEEec-cCCEEEEeeCCC
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQ-----------WTNFNVGPQLECMKHNK-HSNIIATGGKEN 149 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~ 149 (444)
|...|.++ +|++++|++|+.||.|++||+.++++. ....+|..+|.+++|+| ++.+|++|+.|+
T Consensus 97 --~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg 174 (902)
T 2oaj_A 97 --VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV 174 (902)
T ss_dssp --CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC
T ss_pred --CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC
Confidence 44556555 689999999999999999999987653 23456899999999999 467999999999
Q ss_pred eEEEEEcCCceeeeeeecccceeeEeeeCCCc-----ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC---
Q psy8152 150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE-----FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ--- 221 (444)
Q Consensus 150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--- 221 (444)
.| +||+++++++..+..+... ..|.+ ....+...|++++|+|++++|++++.|++|++||+++...
T Consensus 175 ~v-lWd~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 175 TL-TYSLVENEIKQSFIYELPP-----FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp EE-EEETTTTEEEEEECCCBCT-----TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred cE-EEECCCCceEEEEecccCC-----cCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 99 9999999888777654110 00000 0011234699999999999999999999999999862100
Q ss_pred ----------------------ccceE-------------------------------EEe-------------------
Q psy8152 222 ----------------------RRPVL-------------------------------KVD------------------- 229 (444)
Q Consensus 222 ----------------------~~~~~-------------------------------~~~------------------- 229 (444)
...+. .+.
T Consensus 249 r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~ 328 (902)
T 2oaj_A 249 RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYY 328 (902)
T ss_dssp ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHH
T ss_pred EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhh
Confidence 00000 000
Q ss_pred -----------CC-----------------------------------------------------------CCCeeE--
Q psy8152 230 -----------IP-----------------------------------------------------------DVALSC-- 237 (444)
Q Consensus 230 -----------~~-----------------------------------------------------------~~~i~~-- 237 (444)
.+ ...|++
T Consensus 329 ~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~ 408 (902)
T 2oaj_A 329 ANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSM 408 (902)
T ss_dssp HSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEE
T ss_pred cCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEE
Confidence 00 001111
Q ss_pred --------------------------------EEEccCCCEEEEEcCCCcEEEEEcCCCCcce--eEe----c-----cc
Q psy8152 238 --------------------------------ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC--YKY----K-----GF 274 (444)
Q Consensus 238 --------------------------------~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~----~-----~h 274 (444)
++|+|++++|++|+.|++|++||+.. +... ..+ . +|
T Consensus 409 ~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~-g~~~~~~~~~~~l~~~~~~~h 487 (902)
T 2oaj_A 409 AASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASH-GDIQDNASFEVNLSRTLNKAK 487 (902)
T ss_dssp EEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSC-CTTTTTBCEEEEHHHHTTCSS
T ss_pred EEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCC-ccccCCceEEeechhhcCCCC
Confidence 22356778899999999999999887 5422 111 1 78
Q ss_pred cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc---------------------------------------------e
Q psy8152 275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK---------------------------------------------L 309 (444)
Q Consensus 275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~---------------------------------------------~ 309 (444)
...|++++|+|++++||+|+.||+|+||++.+++ +
T Consensus 488 ~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 567 (902)
T 2oaj_A 488 ELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMP 567 (902)
T ss_dssp SCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEE
T ss_pred CCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccce
Confidence 8899999999999999999999999999998662 2
Q ss_pred EEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccc
Q psy8152 310 LRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEM 359 (444)
Q Consensus 310 ~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~ 359 (444)
+..+. |.+.|++++|++ ++ +|++++.|++|+|||+.....
T Consensus 568 ~~~l~~h~~~V~svafSp---------dG-~lAsgs~D~tv~lwd~~~~~~ 608 (902)
T 2oaj_A 568 STAVHANKGKTSAINNSN---------IG-FVGIAYAAGSLMLIDRRGPAI 608 (902)
T ss_dssp EEEECCCSCSEEEEEECB---------TS-EEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEcCCCcEEEEEecC---------Cc-EEEEEeCCCcEEEEECCCCeE
Confidence 44444 889999999884 46 899999999999999876544
No 61
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-41 Score=315.90 Aligned_cols=286 Identities=6% Similarity=0.017 Sum_probs=223.5
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC--ccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK--NFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~ 115 (444)
.|..+|++++|+ |++++|++|+.|+.|+||++.++ +....+. +|...|.++ +|++++|++++.|+.|++|++.
T Consensus 9 ~~~~~v~~~~~s-~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 9 ILPKPSYEHAFN-SQRTEFVTTTATNQVELYEQDGNGWKHARTFS--DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp ECSSCCSCCEEC-SSSSEEECCCSSSCBCEEEEETTEEEECCCBC--CCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred cCCCcEEEEEEC-CCCCEEEEecCCCEEEEEEccCCceEEEEEEe--cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 356899999999 79999999999999999999987 5555554 677777665 6789999999999999999999
Q ss_pred CCC---ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee---eeeeec-ccceeeEeeeCCCcccccCcc
Q psy8152 116 TEP---DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN---IFSAKN-VSHRVLVYSVKPDEFDLRRPV 188 (444)
Q Consensus 116 ~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 188 (444)
+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. |..
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~------------------ 147 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS------------------ 147 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS------------------
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC------------------
Confidence 877 4445778999999999999999999999999999999998763 555555 555
Q ss_pred ceeEEEEecCCCEEEEEeCCceEEEEEcCCC---------------CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC
Q psy8152 189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKIT---------------TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT 253 (444)
Q Consensus 189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 253 (444)
.|++++|+|++++|++++.|+.|++||+... ....++..+ .|...|.+++|+|++++|++++.|
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC
Confidence 7999999999999999999999999998510 023455555 899999999999999999999999
Q ss_pred CcEEEEEcCCCCcc----eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc--eE-----------------
Q psy8152 254 GDMMAVDLRGKGKP----CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK--LL----------------- 310 (444)
Q Consensus 254 g~i~iwd~~~~~~~----~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~--~~----------------- 310 (444)
|.|++||+.+ ++. +..+.+|..+|++++|+|++++|++++.++.+ +|+..... ..
T Consensus 227 ~~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T 3dwl_C 227 SSVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGN 304 (377)
T ss_dssp TEEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSS
T ss_pred CcEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccc
Confidence 9999999999 777 88889999999999999999999988766655 66654211 00
Q ss_pred -----------------EE-----------------eecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152 311 -----------------RK-----------------DYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP 354 (444)
Q Consensus 311 -----------------~~-----------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~ 354 (444)
.. ..|...|+++.+.+... .....++|++.||.|++|++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~-----~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 305 TGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTP-----GNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp BCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEET-----TEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCC-----CceEEEEeecCCCcEEEecC
Confidence 00 01777888888654311 11136999999999999985
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-39 Score=289.57 Aligned_cols=277 Identities=14% Similarity=0.129 Sum_probs=235.3
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---cccc
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---FNTN 80 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~ 80 (444)
.++.+|++|+.+|.|++|++.++.. ...+. .|...|.+++|+ |++.+|++++.|+.|++|++.... ....
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~----~~~~~--~~~~~v~~~~~~-~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~ 99 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWL----GTVVY--TGQGFLNSVCYD-SEKELLLFGGKDTMINGVPLFATSGEDPLYT 99 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEE----EEEEE--ECSSCEEEEEEE-TTTTEEEEEETTSCEEEEETTCCTTSCC-CE
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEE----EEEee--cCCccEEEEEEC-CCCCEEEEecCCCeEEEEEeeecCCCCcccc
Confidence 3567899999999999999977653 12222 789999999999 799999999999999999987543 3333
Q ss_pred eeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152 81 TDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT 159 (444)
Q Consensus 81 ~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~ 159 (444)
...|...|.++++++++|++++.++.|++|+ .++....+..|...+.+++|+| ++++|++++.++.|++||. .
T Consensus 100 --~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~ 173 (313)
T 3odt_A 100 --LIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--D 173 (313)
T ss_dssp --ECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--T
T ss_pred --hhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--C
Confidence 3578999999999999999999999999999 5556656778999999999999 9999999999999999993 4
Q ss_pred eeeeeeec-ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152 160 KNIFSAKN-VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI 238 (444)
Q Consensus 160 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~ 238 (444)
+....+.. +.. .|.+++|+|++. |++++.++.|++||++ ...++..+..|...|+++
T Consensus 174 ~~~~~~~~~~~~------------------~i~~~~~~~~~~-~~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~i~~~ 231 (313)
T 3odt_A 174 KVIKTFSGIHND------------------VVRHLAVVDDGH-FISCSNDGLIKLVDMH---TGDVLRTYEGHESFVYCI 231 (313)
T ss_dssp EEEEEECSSCSS------------------CEEEEEEEETTE-EEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEE
T ss_pred ceEEEEeccCcc------------------cEEEEEEcCCCe-EEEccCCCeEEEEECC---chhhhhhhhcCCceEEEE
Confidence 45555554 444 799999999988 9999999999999999 788889999999999999
Q ss_pred EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCc
Q psy8152 239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSR 318 (444)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~ 318 (444)
+|+|++ .|++++.||.|++||+++ ++++..+..|...|++++|+|+++ +++++.||.|++|++.+++.+........
T Consensus 232 ~~~~~~-~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 308 (313)
T 3odt_A 232 KLLPNG-DIVSCGEDRTVRIWSKEN-GSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDEIKGE 308 (313)
T ss_dssp EECTTS-CEEEEETTSEEEEECTTT-CCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-------
T ss_pred EEecCC-CEEEEecCCEEEEEECCC-CceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhhhhhh
Confidence 999999 588999999999999999 999999999999999999999998 66799999999999999887665544433
No 63
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.9e-39 Score=318.54 Aligned_cols=325 Identities=13% Similarity=0.110 Sum_probs=266.8
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCccc---ceEEEeeeccC-CcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA---SVLALNWGNVE-ESELLIAYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
..|++++.+|.|++|++.+++. +..+. +|.. .|++++|+ |+ +.+|++++.|+.|++|++.+++.+..+.
T Consensus 174 ~~l~~~~~d~~v~vwd~~~~~~----~~~~~--~~~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 246 (615)
T 1pgu_A 174 MRSMTVGDDGSVVFYQGPPFKF----SASDR--THHKQGSFVRDVEFS-PDSGEFVITVGSDRKISCFDGKSGEFLKYIE 246 (615)
T ss_dssp CEEEEEETTTEEEEEETTTBEE----EEEEC--SSSCTTCCEEEEEEC-STTCCEEEEEETTCCEEEEETTTCCEEEECC
T ss_pred cEEEEEeCCCcEEEEeCCCcce----eeeec--ccCCCCceEEEEEEC-CCCCCEEEEEeCCCeEEEEECCCCCEeEEec
Confidence 4799999999999999887764 22232 6888 99999999 78 9999999999999999999998877763
Q ss_pred ec--cccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCcccccccc----CCCeEEEEEeccCCEEEEeeCCCeEEEEE
Q psy8152 83 VS--FGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNV----GPQLECMKHNKHSNIIATGGKENDLKLWD 155 (444)
Q Consensus 83 ~~--~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~vwd 155 (444)
.. .|...|.++.+ ++++|++++.++.|++|++.+++.+..+..+ ...+.++.|. ++.++++++.++.|++||
T Consensus 247 ~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 247 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYE 325 (615)
T ss_dssp BTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEE
T ss_pred ccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEE
Confidence 11 56777777644 8899999999999999999998877655544 3678888886 889999999999999999
Q ss_pred cCCceeeeeeecccceeeEeeeCCC----------------------------------cc-------------cc----
Q psy8152 156 LNTTKNIFSAKNVSHRVLVYSVKPD----------------------------------EF-------------DL---- 184 (444)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~-------------~~---- 184 (444)
+.+++++..+..|...+..+.+ |+ .. +.
T Consensus 326 ~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~ 404 (615)
T 1pgu_A 326 LGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE 404 (615)
T ss_dssp TTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEE
T ss_pred CCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCc
Confidence 9998888888777666655555 32 00 00
Q ss_pred ---------------------------------------cCccceeEEEEecCCCEEEEEeC-CceEEEEEcCCCCCccc
Q psy8152 185 ---------------------------------------RRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKITTQRRP 224 (444)
Q Consensus 185 ---------------------------------------~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~ 224 (444)
.+...+.+++|+ +++|++++. ++.|++|++. ....
T Consensus 405 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~---~~~~ 479 (615)
T 1pgu_A 405 FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLS---DLEV 479 (615)
T ss_dssp CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETT---EEEE
T ss_pred ccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECC---Cccc
Confidence 112335555555 667778888 8888888888 4333
Q ss_pred e-EEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecC----------CCCEEEE
Q psy8152 225 V-LKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPL----------NENLILS 292 (444)
Q Consensus 225 ~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~----------~~~~l~s 292 (444)
. ..+..|...|++++|+|++++|++++.||.|++|++.+ ++++..+.+ |...|++++|+| ++++|++
T Consensus 480 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~ 558 (615)
T 1pgu_A 480 SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT 558 (615)
T ss_dssp EEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEE
T ss_pred cccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC-CcceeEeecCCCCceeEEEEcCccccccccccCCCEEEE
Confidence 3 55678899999999999999999999999999999999 999999988 999999999999 9999999
Q ss_pred EECCCcEEEEEcCCC-ceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 293 VSLDRHFRVHDFHSK-KLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 293 ~~~dg~i~vw~~~~~-~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
++.||.|++|++.++ +++..+. |...|++++|+++ +. +++++.|+.|++|++..
T Consensus 559 ~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~---------~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 559 GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP---------ST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET---------TE-EEEEETTSCEEEEEEC-
T ss_pred EcCCCcEEEEECCCCceechhhhcCccceEEEEEcCC---------CC-eEEecCCceEEEEeeec
Confidence 999999999999997 6666654 8899999999854 56 99999999999999763
No 64
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.4e-39 Score=300.19 Aligned_cols=281 Identities=10% Similarity=0.095 Sum_probs=225.4
Q ss_pred ccceEEEeeeccCCcEEEEEEcC-------CeEEEEeCCCCccc--------cceeeccccccEEEEEeCCCeEEEEe--
Q psy8152 42 KASVLALNWGNVEESELLIAYSG-------QKIKIYDTDFKNFN--------TNTDVSFGEGDIVGVSRYDECILTAV-- 104 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d-------~~i~vw~~~~~~~~--------~~~~~~~~~~~v~~~s~~~~~l~~~~-- 104 (444)
..+|++++|+ |++.+|++|+.+ +.|++|++...... ..+.+..|...+++++++++.+++++
T Consensus 14 g~PV~sv~fs-~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~ 92 (365)
T 4h5i_A 14 GYPAYGAKFL-NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNE 92 (365)
T ss_dssp SSCEEEEEEE-ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCC
T ss_pred CCCEEEEEEe-CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECC
Confidence 4689999999 799999998754 35999998755432 12334567788899999998888765
Q ss_pred ---------cCCcEEEEEcCCCCccc---------cccccCCCeEEEEEeccCCEEEE--eeCCCeEEEEEcCCceeeee
Q psy8152 105 ---------KSGDVKLWRYKTEPDQW---------TNFNVGPQLECMKHNKHSNIIAT--GGKENDLKLWDLNTTKNIFS 164 (444)
Q Consensus 105 ---------~dg~i~iw~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~vwd~~~~~~~~~ 164 (444)
.++.+++|++....... ....+...+.+++|+|+|++|++ ++.|++|+|||+.+++++..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 46789999987654221 11224456899999999999765 44789999999999999888
Q ss_pred eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccce--EEEeCCCCCeeEEEEcc
Q psy8152 165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPV--LKVDIPDVALSCITTTN 242 (444)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~i~~~~~~~ 242 (444)
+. +.. .|++++|+|++++|++++.+ .+++|+.. ....+ .....|...|.+++|+|
T Consensus 173 ~~-~~~------------------~V~~v~fspdg~~l~s~s~~-~~~~~~~~---~~~~~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 173 IE-TRG------------------EVKDLHFSTDGKVVAYITGS-SLEVISTV---TGSCIARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp EE-CSS------------------CCCEEEECTTSSEEEEECSS-CEEEEETT---TCCEEEEECCCCTTEEEEEEEEEE
T ss_pred eC-CCC------------------ceEEEEEccCCceEEeccce-eEEEEEec---cCcceeeeecCCCCCCEEEEEEcC
Confidence 75 334 59999999999999999865 55666665 33333 33456788899999999
Q ss_pred CCCEEEEEcCCC----cEEEEEcCCCCcc----eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 243 QSHYVIVGSTTG----DMMAVDLRGKGKP----CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 243 ~~~~l~~~~~dg----~i~iwd~~~~~~~----~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
+++++++++.++ .+++|++.. ... ...+.+|...|++++|+|+|++||+|+.|++|+|||+.+++++..+.
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~ 308 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKS-GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK 308 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEET-TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET
T ss_pred CCCEEEEEecCCcceeEEeeccccc-ceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec
Confidence 999999998887 688899876 432 35567899999999999999999999999999999999999998863
Q ss_pred --cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 315 --MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 315 --~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
|..+|++++|+| ++++|+|++.|++||||++..
T Consensus 309 ~gH~~~V~~v~fSp---------dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 309 QAHSFAITEVTISP---------DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TSSSSCEEEEEECT---------TSCEEEEEETTSEEEEEECCT
T ss_pred CcccCCEEEEEECC---------CCCEEEEEeCCCeEEEEEcCC
Confidence 899999999985 468999999999999999863
No 65
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.9e-40 Score=311.71 Aligned_cols=281 Identities=15% Similarity=0.147 Sum_probs=219.9
Q ss_pred CCCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152 2 TLADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT 81 (444)
Q Consensus 2 s~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~ 81 (444)
++.+++.||+|+.||.|+||++..+... ..+...+|.+.|++|+|+|.++.+|++|+.||+|+|||+.++......
T Consensus 128 ~P~~~~~lasGs~dg~i~lWd~~~~~~~----~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 128 HPTHPSTVAVGSKGGDIMLWNFGIKDKP----TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA 203 (435)
T ss_dssp CSSCTTCEEEEETTSCEEEECSSCCSCC----EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE
T ss_pred eCCCCCEEEEEeCCCEEEEEECCCCCce----eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe
Confidence 3456789999999999999999877631 222333899999999999547899999999999999999876554443
Q ss_pred eeccccccE--EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCC
Q psy8152 82 DVSFGEGDI--VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDLNT 158 (444)
Q Consensus 82 ~~~~~~~~v--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~ 158 (444)
..+.+...+ .+++|++.+|++|+.+|.|++||+... .+..+..|...|++++|+|++. +|++|+.|+.|++||+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 204 SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 333333334 556889999999999999999999754 4556888999999999999664 788999999999999988
Q ss_pred ceeeeee---ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC--
Q psy8152 159 TKNIFSA---KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV-- 233 (444)
Q Consensus 159 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-- 233 (444)
.+....+ ..|.. .|++++|+|++++|++++.|+.|++||+. .......+..|..
T Consensus 283 ~~~~~~~~~~~~h~~------------------~v~~~~~spdg~~l~s~~~D~~i~iwd~~---~~~~~~~~~~~~~~~ 341 (435)
T 4e54_B 283 VRGKASFLYSLPHRH------------------PVNAACFSPDGARLLTTDQKSEIRVYSAS---QWDCPLGLIPHPHRH 341 (435)
T ss_dssp CCSSSCCSBCCBCSS------------------CEEECCBCTTSSEEEEEESSSCEEEEESS---SSSSEEEECCCCCCC
T ss_pred ccccceEEEeeeccc------------------cccceeECCCCCeeEEEcCCCEEEEEECC---CCccceEEecccccc
Confidence 6544332 33444 79999999999999999999999999999 6666666655532
Q ss_pred ----CeeEEEEccCCCEEEEEc------------CCCcEEEEEcCCCCcceeEec-cccCceeEE-EecCCCCEEEEEEC
Q psy8152 234 ----ALSCITTTNQSHYVIVGS------------TTGDMMAVDLRGKGKPCYKYK-GFAGCVKDI-ACPLNENLILSVSL 295 (444)
Q Consensus 234 ----~i~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~-~~s~~~~~l~s~~~ 295 (444)
.+..+.|+|++.++++++ .++.|++||..+ ++++..+. +|...|.++ +|+|+|++|++|+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~-g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~- 419 (435)
T 4e54_B 342 FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS-GKMMCQLYDPESSGISSLNEFNPMGDTLASAM- 419 (435)
T ss_dssp CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS-CCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-
T ss_pred cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC-CcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-
Confidence 234567788777777664 335799999999 99888875 688889887 6999999999876
Q ss_pred CCcEEEEEcCCCceE
Q psy8152 296 DRHFRVHDFHSKKLL 310 (444)
Q Consensus 296 dg~i~vw~~~~~~~~ 310 (444)
|+.|+||++.+++..
T Consensus 420 d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 420 GYHILIWSQQEARTR 434 (435)
T ss_dssp SSEEEECCCC-----
T ss_pred CCcEEEEECCcCeee
Confidence 889999999988763
No 66
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-40 Score=310.78 Aligned_cols=290 Identities=13% Similarity=0.201 Sum_probs=245.5
Q ss_pred CcccceEEEeeeccCCc-EEEEE----------EcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecC
Q psy8152 40 TNKASVLALNWGNVEES-ELLIA----------YSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKS 106 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~-~l~~~----------~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~d 106 (444)
.+...|.+++|+ |++. +|++| +.|+.|+||++.++.....+....|...|.++ +|++++|++++.+
T Consensus 10 ~~~~~v~~~~~s-p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 88 (416)
T 2pm9_A 10 AEFSRTATFAWS-HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN 88 (416)
T ss_dssp CEEEESCBCCBC-SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS
T ss_pred hhhhhcceEeeC-CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC
Confidence 345678999999 6776 89999 88999999999987643222223566677655 6889999999999
Q ss_pred CcEEEEEcCC----CCccccccccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCce------eeeee---eccccee
Q psy8152 107 GDVKLWRYKT----EPDQWTNFNVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTK------NIFSA---KNVSHRV 172 (444)
Q Consensus 107 g~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~------~~~~~---~~~~~~~ 172 (444)
|.|++|++.+ .+.+..+..|...|.+++|+|+ +++|++++.|+.|++||+.+++ ....+ ..+..
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-- 166 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD-- 166 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC--
T ss_pred CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC--
Confidence 9999999987 3456567789999999999997 8999999999999999999876 33222 23333
Q ss_pred eEeeeCCCcccccCccceeEEEEecC-CCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------CCCeeEEEEccCC-
Q psy8152 173 LVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------DVALSCITTTNQS- 244 (444)
Q Consensus 173 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~- 244 (444)
.|++++|+|+ +.+|++++.|+.|++||++ ....+..+..+ ...|.+++|+|++
T Consensus 167 ----------------~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (416)
T 2pm9_A 167 ----------------EVISLAWNQSLAHVFASAGSSNFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNS 227 (416)
T ss_dssp ----------------CCCEEEECSSCTTEEEEESSSSCEEEEETT---TTEEEEEECCCCCSSCCCCCEEEEEECSSCT
T ss_pred ----------------CeeEEEeCCCCCcEEEEEcCCCCEEEEECC---CCCcceEEeccccccccCCceEEEEECCCCC
Confidence 7999999999 6899999999999999999 77778877766 7889999999997
Q ss_pred CEEEEEcCCC---cEEEEEcCCCCcceeEec-cccCceeEEEecC-CCCEEEEEECCCcEEEEEcCCCceEEEee-cCCc
Q psy8152 245 HYVIVGSTTG---DMMAVDLRGKGKPCYKYK-GFAGCVKDIACPL-NENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSR 318 (444)
Q Consensus 245 ~~l~~~~~dg---~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~ 318 (444)
.+|++++.++ .|++||+++...++..+. +|...|++++|+| ++++|++++.|+.|++|++.+++++..+. |...
T Consensus 228 ~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 307 (416)
T 2pm9_A 228 TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW 307 (416)
T ss_dssp TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC
T ss_pred CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc
Confidence 6899999998 999999998237788888 8999999999999 89999999999999999999999988876 7889
Q ss_pred eeEEEEcCCCcccccchhh-hhccccccCCCccccCCCccccc
Q psy8152 319 LTSILVRSDFSLENETKKE-EQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 319 i~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
|.+++|+++ + .++++++.|+.|++|++......
T Consensus 308 v~~~~~s~~---------~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 308 CFKTKFAPE---------APDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp CCCEEECTT---------CTTEEEECCSSSEEEEEESCCCCCS
T ss_pred eEEEEECCC---------CCCEEEEEecCCcEEEEEccCCCCC
Confidence 999999865 3 68999999999999999876543
No 67
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-38 Score=294.85 Aligned_cols=274 Identities=11% Similarity=0.130 Sum_probs=240.1
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
.++.+|++|+.+|.|++|++.+++. +..+. +|...|++++|+ |++++|++++.||.|++|++.+++.+..+.
T Consensus 42 ~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~--~h~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~- 113 (369)
T 3zwl_B 42 KEGDLLFSCSKDSSASVWYSLNGER----LGTLD--GHTGTIWSIDVD-CFTKYCVTGSADYSIKLWDVSNGQCVATWK- 113 (369)
T ss_dssp TTSCEEEEEESSSCEEEEETTTCCE----EEEEC--CCSSCEEEEEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEE-
T ss_pred CCCCEEEEEeCCCEEEEEeCCCchh----hhhhh--hcCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEee-
Confidence 3668999999999999999988764 22233 799999999999 799999999999999999999999888875
Q ss_pred ccccccEE--EEEeCCCeEEEEecC-----CcEEEEEcCCCCcc-----------ccccccCC--CeEEEEEeccCCEEE
Q psy8152 84 SFGEGDIV--GVSRYDECILTAVKS-----GDVKLWRYKTEPDQ-----------WTNFNVGP--QLECMKHNKHSNIIA 143 (444)
Q Consensus 84 ~~~~~~v~--~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~-----------~~~~~~~~--~v~~~~~~~~~~~l~ 143 (444)
+...+. +++|++++|++++.+ +.|++|++...... ..+..|.. .+.+++|+|++++|+
T Consensus 114 --~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (369)
T 3zwl_B 114 --SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYII 191 (369)
T ss_dssp --CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred --cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEE
Confidence 344554 557899999999998 99999998876432 23344555 899999999999999
Q ss_pred EeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc
Q psy8152 144 TGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR 222 (444)
Q Consensus 144 ~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 222 (444)
+++.+|.|++||+++ .+.+..+..+.. .|.+++|+|++++|++++.|+.|++||++ ..
T Consensus 192 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~~d~~i~v~d~~---~~ 250 (369)
T 3zwl_B 192 AGHKDGKISKYDVSNNYEYVDSIDLHEK------------------SISDMQFSPDLTYFITSSRDTNSFLVDVS---TL 250 (369)
T ss_dssp EEETTSEEEEEETTTTTEEEEEEECCSS------------------CEEEEEECTTSSEEEEEETTSEEEEEETT---TC
T ss_pred EEcCCCEEEEEECCCCcEeEEEEecCCC------------------ceeEEEECCCCCEEEEecCCceEEEEECC---CC
Confidence 999999999999998 778888877776 79999999999999999999999999999 67
Q ss_pred cceEEEeCCCCCeeEEEEccCCCEEEEEcCCC--------------cEEEEEcCCCCcceeEeccccCceeEEEecCCCC
Q psy8152 223 RPVLKVDIPDVALSCITTTNQSHYVIVGSTTG--------------DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN 288 (444)
Q Consensus 223 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~ 288 (444)
..+..+. +...+.+++|+|+++++++++.++ .+++||+.+ ++++..+.+|...|++++|+|+++
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~ 328 (369)
T 3zwl_B 251 QVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHFGPLNTVAISPQGT 328 (369)
T ss_dssp CEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSS
T ss_pred ceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC-CcchhheecccCcEEEEEECCCCC
Confidence 7777776 677899999999999999999888 899999999 999999999999999999999999
Q ss_pred EEEEEECCCcEEEEEcCCCceE
Q psy8152 289 LILSVSLDRHFRVHDFHSKKLL 310 (444)
Q Consensus 289 ~l~s~~~dg~i~vw~~~~~~~~ 310 (444)
+|++++.||.|++|++..+...
T Consensus 329 ~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 329 SYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp EEEEEETTSEEEEEEECHHHHT
T ss_pred EEEEEcCCCeEEEEECccccch
Confidence 9999999999999999876543
No 68
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.3e-39 Score=286.41 Aligned_cols=244 Identities=10% Similarity=0.115 Sum_probs=203.5
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCC--ccccceeeccccccEEEEE--e--CCCeEEEEecCCcEEEEE
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFK--NFNTNTDVSFGEGDIVGVS--R--YDECILTAVKSGDVKLWR 113 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~~~v~~~s--~--~~~~l~~~~~dg~i~iw~ 113 (444)
+|...|++++|+ |++++|++|+.|++|+||++... +.+..+ .+|..+|.++. + ++++|++|+.|++|++|+
T Consensus 7 ~h~~~V~~~~~s-~~g~~las~s~D~~v~iw~~~~~~~~~~~~l--~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 7 AHNEMIHDAVMD-YYGKRMATCSSDKTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp SCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEBCSSCBCCCEEE--CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred CCcCceEEEEEC-CCCCEEEEEeCCCEEEEEecCCCCcEEEEEE--ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 899999999999 79999999999999999999754 444444 58888998775 3 378999999999999999
Q ss_pred cCCCC--ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCcee--eeeeecccceeeEeeeCCCcccccCc
Q psy8152 114 YKTEP--DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTKN--IFSAKNVSHRVLVYSVKPDEFDLRRP 187 (444)
Q Consensus 114 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (444)
+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++.+.. ...+..|..
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~----------------- 146 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI----------------- 146 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS-----------------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC-----------------
Confidence 98874 33345679999999999996 89999999999999999987532 344555555
Q ss_pred cceeEEEEecC-------------CCEEEEEeCCceEEEEEcCCCCC--ccceEEEeCCCCCeeEEEEccCC---CEEEE
Q psy8152 188 VWVNGISFLPN-------------SDKVAVCSKQGYVRVYDPKITTQ--RRPVLKVDIPDVALSCITTTNQS---HYVIV 249 (444)
Q Consensus 188 ~~i~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~---~~l~~ 249 (444)
.|++++|+|+ +++|++|+.|++|++||++ ... ......+.+|...|.+++|+|++ .+|++
T Consensus 147 -~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~-~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 147 -GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN-SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp -CEEEEEECCCC------------CCEEEEEETTSCEEEEEEE-TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred -ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc-CCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence 6888888886 4799999999999999998 111 12556788999999999999984 89999
Q ss_pred EcCCCcEEEEEcCCCCc---ceeEe--ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 250 GSTTGDMMAVDLRGKGK---PCYKY--KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 250 ~~~dg~i~iwd~~~~~~---~~~~~--~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
++.|++|+|||+.. .. ....+ ..|...|.+++|+|++++|++++.|+.|+||+...
T Consensus 225 ~s~D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 225 VSQDRTCIIWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EETTSCEEEEEESS-TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EECCCcEEEEEeCC-CCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99999999999986 43 12233 46788999999999999999999999999999863
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.8e-39 Score=297.31 Aligned_cols=279 Identities=13% Similarity=0.188 Sum_probs=234.1
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++|+.+|.|++|++.+++. ..+..+. +|...|++++|+ |++.+|++++.|+.|++|++.+++....+..
T Consensus 18 ~~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~--~h~~~v~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 18 KDRTQIAICPNNHEVHIYEKSGNKW--VQVHELK--EHNGQVTGVDWA-PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp TTSSEEEEECSSSEEEEEEEETTEE--EEEEEEE--CCSSCEEEEEEE-TTTTEEEEEETTSCEEEEEEETTEEEEEEEC
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCcE--Eeeeeec--CCCCcccEEEEe-CCCCEEEEEcCCCeEEEEECCCCeeeeeEEe
Confidence 4668899999999999999988751 1123333 799999999999 7999999999999999999988876666655
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc----cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD----QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLN 157 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~ 157 (444)
..|...|.++ +|++++|++++.++.|++|++..+.. ......|...|.+++|+|++++|++++.|+.|++||++
T Consensus 93 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 5677777665 67899999999999999999998763 22335689999999999999999999999999999964
Q ss_pred ------------------CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC
Q psy8152 158 ------------------TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT 219 (444)
Q Consensus 158 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 219 (444)
.++.+..+..+.. .|++++|+|++++|++++.|+.|++||++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-- 232 (372)
T 1k8k_C 173 IKEVEERPAPTPWGSKMPFGELMFESSSSCG------------------WVHGVCFSANGSRVAWVSHDSTVCLADAD-- 232 (372)
T ss_dssp CTTTSCCCCCBTTBSCCCTTCEEEECCCCSS------------------CEEEEEECSSSSEEEEEETTTEEEEEEGG--
T ss_pred cccccccccccccccccchhhheEecCCCCC------------------eEEEEEECCCCCEEEEEeCCCEEEEEECC--
Confidence 4666666666655 79999999999999999999999999999
Q ss_pred CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc---------------------------------
Q psy8152 220 TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK--------------------------------- 266 (444)
Q Consensus 220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------------------------- 266 (444)
...++..+..|..+|.+++|+|++++|++| .++.|++|++..+..
T Consensus 233 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
T 1k8k_C 233 -KKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKAS 310 (372)
T ss_dssp -GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-
T ss_pred -CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccc
Confidence 778888999999999999999999988888 899999999875101
Q ss_pred ce------eEe-ccccCceeEEEec-CCC---CEEEEEECCCcEEEEEcCCCce
Q psy8152 267 PC------YKY-KGFAGCVKDIACP-LNE---NLILSVSLDRHFRVHDFHSKKL 309 (444)
Q Consensus 267 ~~------~~~-~~h~~~i~~~~~s-~~~---~~l~s~~~dg~i~vw~~~~~~~ 309 (444)
.. ..+ .+|..+|++++|+ +++ ++|++++.||.|++|++.+++.
T Consensus 311 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 311 SEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp --------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred cccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 10 333 3899999999966 666 8999999999999999977543
No 70
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.4e-39 Score=321.14 Aligned_cols=274 Identities=14% Similarity=0.149 Sum_probs=228.6
Q ss_pred CCCcccEEEecCCCcEEEEEcCCCcccee-eeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccce
Q psy8152 3 LADDYNIYIGSSTGAFKGVNLSKDKCIIK-NIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNT 81 (444)
Q Consensus 3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~ 81 (444)
+.+..+|++|+.||.|++|++........ ....+. +|...|++++|+ |++++|++|+.|++|+|||+.++.....+
T Consensus 392 ~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~--~h~~~v~~v~~s-~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~ 468 (694)
T 3dm0_A 392 IDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT--GHSHFVEDVVLS-SDGQFALSGSWDGELRLWDLAAGVSTRRF 468 (694)
T ss_dssp TTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE--CCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEEccCCCcccccccceec--CCCCcEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCcceeEE
Confidence 34457899999999999999976543111 111222 899999999999 79999999999999999999999888777
Q ss_pred eeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc---cccccCCCeEEEEEeccC--CEEEEeeCCCeEEEE
Q psy8152 82 DVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW---TNFNVGPQLECMKHNKHS--NIIATGGKENDLKLW 154 (444)
Q Consensus 82 ~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~vw 154 (444)
. +|...|.++ +|++++|++++.|++|++|++....... ...+|...|.+++|+|++ ..|++++.|+.|++|
T Consensus 469 ~--~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw 546 (694)
T 3dm0_A 469 V--GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 546 (694)
T ss_dssp E--CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred e--CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEE
Confidence 5 677777665 6889999999999999999986543322 124688899999999965 689999999999999
Q ss_pred EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCC
Q psy8152 155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVA 234 (444)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (444)
|+++++....+.+|.. .|++++|+|++++|++|+.|++|++||++ ..+.+..+.. ...
T Consensus 547 d~~~~~~~~~~~~h~~------------------~v~~v~~spdg~~l~sg~~Dg~i~iwd~~---~~~~~~~~~~-~~~ 604 (694)
T 3dm0_A 547 NLSNCKLRSTLAGHTG------------------YVSTVAVSPDGSLCASGGKDGVVLLWDLA---EGKKLYSLEA-NSV 604 (694)
T ss_dssp ETTTCCEEEEECCCSS------------------CEEEEEECTTSSEEEEEETTSBCEEEETT---TTEEEECCBC-SSC
T ss_pred ECCCCcEEEEEcCCCC------------------CEEEEEEeCCCCEEEEEeCCCeEEEEECC---CCceEEEecC-CCc
Confidence 9999999888888877 89999999999999999999999999999 6777776654 457
Q ss_pred eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-------------------CceeEEEecCCCCEEEEEEC
Q psy8152 235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------------------GCVKDIACPLNENLILSVSL 295 (444)
Q Consensus 235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------------------~~i~~~~~s~~~~~l~s~~~ 295 (444)
|.+++|+|++.+|++++ ++.|+|||+++ +..+..+..+. ..+++++|+|++++|++|+.
T Consensus 605 v~~~~~sp~~~~l~~~~-~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 605 IHALCFSPNRYWLCAAT-EHGIKIWDLES-KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp EEEEEECSSSSEEEEEE-TTEEEEEETTT-TEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEcCCCcEEEEEc-CCCEEEEECCC-CCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 99999999998887765 56699999999 88877765321 13788999999999999999
Q ss_pred CCcEEEEEcC
Q psy8152 296 DRHFRVHDFH 305 (444)
Q Consensus 296 dg~i~vw~~~ 305 (444)
||+|+||++.
T Consensus 683 Dg~i~iW~i~ 692 (694)
T 3dm0_A 683 DGVIRVWGIG 692 (694)
T ss_dssp TSEEEEEEC-
T ss_pred CCeEEEEecc
Confidence 9999999985
No 71
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-40 Score=310.67 Aligned_cols=283 Identities=11% Similarity=0.099 Sum_probs=233.6
Q ss_pred CcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCC---CccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEE
Q psy8152 40 TNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDF---KNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWR 113 (444)
Q Consensus 40 ~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~---~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~ 113 (444)
+|.+.|++++|+ | ++.+|++|+.||+|+||++.+ +..........|...|.++ +|++++|++++.||.|++|+
T Consensus 61 ~h~~~V~~~~~s-~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd 139 (437)
T 3gre_A 61 NEPNSITSSAVS-PGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK 139 (437)
T ss_dssp TTTSCEEEEEEE-CSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCCceEEEEEC-CCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 789999999999 7 899999999999999999876 4422211212577778766 57889999999999999999
Q ss_pred cC---CCCcccccc----------c--cCCCeEEEE--EeccCCEEEEeeCCCeEEEEEcCCceeeeeeec--ccceeeE
Q psy8152 114 YK---TEPDQWTNF----------N--VGPQLECMK--HNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN--VSHRVLV 174 (444)
Q Consensus 114 ~~---~~~~~~~~~----------~--~~~~v~~~~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~ 174 (444)
+. +++...... . +...+.++. +++++.+|++|+.|+.|++||+++++++..+.. |..
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~---- 215 (437)
T 3gre_A 140 VNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG---- 215 (437)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC----
T ss_pred eccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC----
Confidence 94 454433111 1 556677777 456899999999999999999999999988887 445
Q ss_pred eeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEcc----CCCEEEE
Q psy8152 175 YSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTN----QSHYVIV 249 (444)
Q Consensus 175 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~----~~~~l~~ 249 (444)
.|++++|+|++++|++|+.||.|++||++ ...++..+. .|..+|++++|+| ++.+|++
T Consensus 216 --------------~v~~~~~s~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s 278 (437)
T 3gre_A 216 --------------AVSSICIDEECCVLILGTTRGIIDIWDIR---FNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVG 278 (437)
T ss_dssp --------------CEEEEEECTTSCEEEEEETTSCEEEEETT---TTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEE
T ss_pred --------------ceEEEEECCCCCEEEEEcCCCeEEEEEcC---CccEEEEEecCCCCceEEEEeccccCCCccEEEE
Confidence 79999999999999999999999999999 778888776 7778999996665 5789999
Q ss_pred EcCCCcEEEEEcCCCCcceeEecc--------------------------ccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152 250 GSTTGDMMAVDLRGKGKPCYKYKG--------------------------FAGCVKDIACPLNENLILSVSLDRHFRVHD 303 (444)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~--------------------------h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~ 303 (444)
|+.||.|++||+++ ++++..+.+ |...|++++|+ ++++|++++.|+.|++|+
T Consensus 279 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd 356 (437)
T 3gre_A 279 GSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFS 356 (437)
T ss_dssp ESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEE
T ss_pred EcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEE
Confidence 99999999999998 887776664 45568888998 678999999999999999
Q ss_pred cCCCceEEEee--------------------------------------cCCceeEEEEcCCCcccccchhhhhcccccc
Q psy8152 304 FHSKKLLRKDY--------------------------------------MQSRLTSILVRSDFSLENETKKEEQEHSEEK 345 (444)
Q Consensus 304 ~~~~~~~~~~~--------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~ 345 (444)
+.+++++..+. |...|++++|.+. +...++++++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~-------~~~~~l~s~~~ 429 (437)
T 3gre_A 357 LNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV-------DETPLLVACDN 429 (437)
T ss_dssp TTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES-------SSSEEEEEEET
T ss_pred CCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc-------CCceEEEEEcC
Confidence 99988766554 6778899988765 33578999999
Q ss_pred CCCccccC
Q psy8152 346 GDSDEKYD 353 (444)
Q Consensus 346 d~~i~~W~ 353 (444)
||.|+||+
T Consensus 430 dG~I~iw~ 437 (437)
T 3gre_A 430 SGLIGIFQ 437 (437)
T ss_dssp TSCEEEEC
T ss_pred CceEEEeC
Confidence 99999995
No 72
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.9e-39 Score=297.82 Aligned_cols=268 Identities=13% Similarity=0.120 Sum_probs=216.4
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee-ecc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD-VSF 85 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~-~~~ 85 (444)
.+|++|+.||.|++|++.+++.. ..+...+|...|++++|+|.++.+|++++.|+.|++|++.+. ....+. ...
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~ 161 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKT----SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDS 161 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCE----EEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCC
T ss_pred CEEEEEcCCCeEEEEeCCCcccc----eeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCC
Confidence 79999999999999999987741 222223799999999999327899999999999999999863 333333 223
Q ss_pred ccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCC----
Q psy8152 86 GEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDLNT---- 158 (444)
Q Consensus 86 ~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~---- 158 (444)
+...|.+ ++|++++|++++.++.|++||+ +++.+..+..|...|.+++|+|++. +|++++.|+.|++||+++
T Consensus 162 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 240 (383)
T 3ei3_B 162 WDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK 240 (383)
T ss_dssp SSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST
T ss_pred CCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc
Confidence 3455554 5789999999999999999999 4666667888999999999999888 999999999999999998
Q ss_pred ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------
Q psy8152 159 TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------ 231 (444)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------ 231 (444)
+.++..+ .+.. .|++++|+| ++++|++++.|+.|++||++ .......+..|
T Consensus 241 ~~~~~~~-~~~~------------------~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 241 NSYIAEM-PHEK------------------PVNAAYFNPTDSTKLLTTDQRNEIRVYSSY---DWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp TCEEEEE-ECSS------------------CEEEEEECTTTSCEEEEEESSSEEEEEETT---BTTSCSEEEECCBCCCT
T ss_pred cceEEEe-cCCC------------------ceEEEEEcCCCCCEEEEEcCCCcEEEEECC---CCccccccccccccccc
Confidence 5555555 4444 799999999 99999999999999999999 54444444433
Q ss_pred -CC----------CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc--ccCceeEEEecCCCCEEEEEECCCc
Q psy8152 232 -DV----------ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--FAGCVKDIACPLNENLILSVSLDRH 298 (444)
Q Consensus 232 -~~----------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--h~~~i~~~~~s~~~~~l~s~~~dg~ 298 (444)
.. .+..++|+|++++ +++.|+.|++||+.+ ++++..+.+ |...+..++|+|++++|++++ |+.
T Consensus 299 ~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~-~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~ 374 (383)
T 3ei3_B 299 HLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANS-GGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN 374 (383)
T ss_dssp TSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTT-CCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE
T ss_pred cccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCC-CceeeeecCCCCCceEEEEEEecCccEEEEec-CCc
Confidence 22 2334556666655 677899999999999 999999986 567788889999999999997 999
Q ss_pred EEEEEcCC
Q psy8152 299 FRVHDFHS 306 (444)
Q Consensus 299 i~vw~~~~ 306 (444)
|+||++.+
T Consensus 375 i~iw~~~~ 382 (383)
T 3ei3_B 375 ILIWNRED 382 (383)
T ss_dssp EEEEECC-
T ss_pred EEEEecCC
Confidence 99999864
No 73
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=286.61 Aligned_cols=272 Identities=11% Similarity=0.114 Sum_probs=228.4
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF 85 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~ 85 (444)
++.|++| .|++|+|||+.+++. ++.+...+|...|++++|+ |++++|++|+.||+|++|++.+++.+..+. +
T Consensus 36 ~~~lAvg-~D~tV~iWd~~tg~~----~~~~~~~~~~~~V~~v~~~-~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~--~ 107 (318)
T 4ggc_A 36 GNVLAVA-LDNSVYLWSASSGDI----LQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEVQLWDVQQQKRLRNMT--S 107 (318)
T ss_dssp TSEEEEE-ETTEEEEEETTTCCE----EEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE--C
T ss_pred CCEEEEE-eCCEEEEEECCCCCE----EEEEEecCCCCeEEEEEEC-CCCCEEEEEECCCcEEEeecCCceeEEEec--C
Confidence 3466665 599999999999875 2333333789999999999 799999999999999999999999888775 7
Q ss_pred ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc-cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee--
Q psy8152 86 GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD-QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI-- 162 (444)
Q Consensus 86 ~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-- 162 (444)
|...+.++++++.++++++.++.+++|+...... +..+..|...+.++.+++++++|++++.|+.|++||+++++..
T Consensus 108 h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 187 (318)
T 4ggc_A 108 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 187 (318)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC
T ss_pred ccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc
Confidence 8899999999999999999999999999877644 3456779999999999999999999999999999999886532
Q ss_pred --eeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EE--EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152 163 --FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KV--AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC 237 (444)
Q Consensus 163 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l--~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 237 (444)
.....+.. .|.+++++|.+. .+ ++++.+++|++|+.. ....... ..+...+..
T Consensus 188 ~~~~~~~~~~------------------~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~---~~~~~~~-~~~~~~v~~ 245 (318)
T 4ggc_A 188 PLQTFTQHQG------------------AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC---SGACLSA-VDAHSQVCS 245 (318)
T ss_dssp CSEEECCCCS------------------CEEEEEECTTSTTEEEEEECTTTCEEEEEETT---TCCEEEE-EECSSCEEE
T ss_pred ceeeecccCC------------------ceEEEEecCCCCcEEEEEecCCCCEEEEEecc---ccccccc-ccceeeeee
Confidence 22222233 689999999874 33 466789999999998 4444443 346677999
Q ss_pred EEEccCCCEEEEE--cCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152 238 ITTTNQSHYVIVG--STTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK 308 (444)
Q Consensus 238 ~~~~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 308 (444)
+.|+|.+..++++ +.|+.|+|||+++ ++++.++.+|.+.|++++|+|++++|+||+.||+|+|||+....
T Consensus 246 ~~~~~~~~~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 246 ILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred eeecccccceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 9999999888764 4799999999999 99999999999999999999999999999999999999997643
No 74
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=298.97 Aligned_cols=288 Identities=10% Similarity=0.152 Sum_probs=235.7
Q ss_pred CcccceEEEeeeccCCcEE-EEEEc---CCeEEEEeCCCCccccceeeccccccEEEE--EeC---CCeEEEEecCCcEE
Q psy8152 40 TNKASVLALNWGNVEESEL-LIAYS---GQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRY---DECILTAVKSGDVK 110 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l-~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~---~~~l~~~~~dg~i~ 110 (444)
+|...|++++|+ |++..| ++|+. |+.|+||++.+++....... .|...|.++ +|+ +.+|++++.+|.|+
T Consensus 16 ~h~~~v~~~~~~-p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 16 GFNYTVFDCKWV-PCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-EKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp ECSSCEEEEEEC-TTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-EESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred CCCCceEEEEEc-CCCceEEEecCccCCCcEEEEEeCCCCcccceeee-cccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 799999999999 677554 56665 89999999998887655432 667778776 455 68999999999999
Q ss_pred EEEcCCCC-ccccccccCCCeEEEEE------eccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcc
Q psy8152 111 LWRYKTEP-DQWTNFNVGPQLECMKH------NKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEF 182 (444)
Q Consensus 111 iw~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 182 (444)
+|++.+++ .+..+..|...|.+++| +|++++|++++.|+.|++||+.+++ ++..+..+..
T Consensus 94 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~------------ 161 (357)
T 3i2n_A 94 IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG------------ 161 (357)
T ss_dssp EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT------------
T ss_pred EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC------------
Confidence 99999887 67677889999999965 6789999999999999999999876 5666554332
Q ss_pred cccCccceeEEE----EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc---CCCEEEEEcCCCc
Q psy8152 183 DLRRPVWVNGIS----FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN---QSHYVIVGSTTGD 255 (444)
Q Consensus 183 ~~~~~~~i~~~~----~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~ 255 (444)
.....|.+++ |+|++++|++++.++.|++||++ ...... ...|...|.+++|+| ++.+|++++.+|.
T Consensus 162 --~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 235 (357)
T 3i2n_A 162 --ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR---NMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGK 235 (357)
T ss_dssp --SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETT---TTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTE
T ss_pred --CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECc---cCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCe
Confidence 0122578888 77899999999999999999999 555443 456788999999999 8999999999999
Q ss_pred EEEEEcCCCCcceeEec-----cccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCCc-------------------eE
Q psy8152 256 MMAVDLRGKGKPCYKYK-----GFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSKK-------------------LL 310 (444)
Q Consensus 256 i~iwd~~~~~~~~~~~~-----~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~-------------------~~ 310 (444)
|++||+++ ++++..+. +|...|++++|+|+++ +|++++.||.|++|++..+. ++
T Consensus 236 i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (357)
T 3i2n_A 236 FHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLL 314 (357)
T ss_dssp EEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEE
T ss_pred EEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccccee
Confidence 99999998 77776665 8999999999999998 89999999999999997642 34
Q ss_pred EEee-cCCceeEEEEcCCCcccccchhhhhcc-ccccCCCccccCCCcc
Q psy8152 311 RKDY-MQSRLTSILVRSDFSLENETKKEEQEH-SEEKGDSDEKYDPEHF 357 (444)
Q Consensus 311 ~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~-s~~~d~~i~~W~~~~~ 357 (444)
..+. |...|.+++|+++ +.+++ +++.|+.|++|++...
T Consensus 315 ~~~~~~~~~v~~~~~s~~---------~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 315 QNVTLSTQPISSLDWSPD---------KRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEECCSSCEEEEEECSS---------STTEEEEEETTSEEEEEEECC-
T ss_pred eccccCCCCeeEEEEcCC---------CCeEEEEecCCCcEEEEECCCc
Confidence 4443 8889999999855 56777 8999999999998754
No 75
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.7e-38 Score=335.00 Aligned_cols=337 Identities=15% Similarity=0.159 Sum_probs=286.6
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
+++.+|++|+.||.|++|++.+++. +..+. +|...|.+++|+|. +..++++|+.|+.|++||+.++++...+.
T Consensus 667 ~~~~~l~s~~~d~~v~vwd~~~~~~----~~~~~--~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~ 740 (1249)
T 3sfz_A 667 SDDSYIATCSADKKVKIWDSATGKL----VHTYD--EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF 740 (1249)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCE----EEEEE--CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred cCCCEEEEEeCCCeEEEEECCCCce----EEEEc--CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence 4568999999999999999998874 22233 79999999999932 45689999999999999999999887775
Q ss_pred eccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCcccc--------------------------------------
Q psy8152 83 VSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWT-------------------------------------- 122 (444)
Q Consensus 83 ~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-------------------------------------- 122 (444)
+|...|.+ ++|++++|++++.||.|++|++.+++....
T Consensus 741 --~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 818 (1249)
T 3sfz_A 741 --GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK 818 (1249)
T ss_dssp --CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred --CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence 66777765 478999999999999999999876532211
Q ss_pred -----------------ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc---
Q psy8152 123 -----------------NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF--- 182 (444)
Q Consensus 123 -----------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 182 (444)
...|...|.+++|+|++.++++++.++.|++|++.++..+..+.+|...+..+.++|++.
T Consensus 819 ~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 819 NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp TEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEE
Confidence 115778899999999999999999999999999999999999999999899999988742
Q ss_pred ----cc------------------------------------------------------cCccceeEEEEecCCCEEEE
Q psy8152 183 ----DL------------------------------------------------------RRPVWVNGISFLPNSDKVAV 204 (444)
Q Consensus 183 ----~~------------------------------------------------------~~~~~i~~~~~~~~~~~l~~ 204 (444)
+. .....+.+++|+|+++++++
T Consensus 899 s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~ 978 (1249)
T 3sfz_A 899 TASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAF 978 (1249)
T ss_dssp EEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEE
T ss_pred EEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEE
Confidence 00 01235889999999999999
Q ss_pred EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec
Q psy8152 205 CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP 284 (444)
Q Consensus 205 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s 284 (444)
|+.+|.|++|++. ....+..+.+|...|++++|+|++++|++++.||.|++|++.+ +..+. +..|...|.+++|+
T Consensus 979 g~~~g~i~i~d~~---~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~-~~~~~-~~~~~~~v~~~~~~ 1053 (1249)
T 3sfz_A 979 GDEDGAIKIIELP---NNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT-GDYVF-LQAHQETVKDFRLL 1053 (1249)
T ss_dssp EETTSCCEEEETT---TTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT-TEEEC-CBCCSSCEEEEEEC
T ss_pred EcCCCCEEEEEcC---CCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CceEE-EecCCCcEEEEEEc
Confidence 9999999999999 7778888889999999999999999999999999999999998 76664 55799999999999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccccc
Q psy8152 285 LNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQVT 363 (444)
Q Consensus 285 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~~~ 363 (444)
|++ .+++++.||.|++|++.+++++..+. |...|.+++|+++ +.++++++.|++|++|++..+......
T Consensus 1054 ~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d---------~~~l~s~s~d~~v~iwd~~~~~~~~~l 1123 (1249)
T 3sfz_A 1054 QDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSD---------ATKFSSTSADKTAKIWSFDLLSPLHEL 1123 (1249)
T ss_dssp SSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSS---------SSSCEEECCSSCCCEECSSSSSCSBCC
T ss_pred CCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCC---------CCEEEEEcCCCcEEEEECCCcceeeee
Confidence 965 67889999999999999999888876 8889999998854 578999999999999999876654433
No 76
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.1e-38 Score=298.82 Aligned_cols=279 Identities=15% Similarity=0.219 Sum_probs=232.1
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
++.+|++|+.+|.|++|++.+++. ...+. +|...|++++|. +++|++|+.||.|++|++.+++.+..+.
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~----~~~~~--~h~~~v~~l~~~---~~~l~sg~~dg~i~vwd~~~~~~~~~~~-- 210 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLEC----KRILT--GHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEMLNTLI-- 210 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCE----EEEEC--CCSSCEEEEECC---SSEEEEEETTSCEEEEESSSCCEEEEEC--
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeE----EEEEc--CCCCcEEEEEEC---CCEEEEEcCCCeEEEEECCCCcEEEEEc--
Confidence 567899999999999999988774 12222 799999999995 7899999999999999999999887775
Q ss_pred cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcc---ccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQ---WTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
+|...|.++.+++.+|++|+.||.|++||+.++... ..+.+|...|.+++| ++++|++|+.||.|++||+++++.
T Consensus 211 ~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 211 HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 778999999999999999999999999999988765 456779999999999 788999999999999999999999
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 241 (444)
+..+..|.. .|.+++|+ +.+|++|+.||.|++||++ ...++..+.+|...|.+++|
T Consensus 289 ~~~~~~~~~------------------~v~~~~~~--~~~l~~g~~dg~i~iwd~~---~~~~~~~~~~h~~~v~~~~~- 344 (435)
T 1p22_A 289 VRTLNGHKR------------------GIACLQYR--DRLVVSGSSDNTIRLWDIE---CGACLRVLEGHEELVRCIRF- 344 (435)
T ss_dssp EEEEECCSS------------------CEEEEEEE--TTEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEC-
T ss_pred EEEEcCCCC------------------cEEEEEeC--CCEEEEEeCCCeEEEEECC---CCCEEEEEeCCcCcEEEEEe-
Confidence 999888777 79999984 5899999999999999999 78889999999999999999
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCCc---------ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152 242 NQSHYVIVGSTTGDMMAVDLRGKGK---------PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK 312 (444)
Q Consensus 242 ~~~~~l~~~~~dg~i~iwd~~~~~~---------~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 312 (444)
++.+|++|+.||.|++||+.. +. ++..+.+|.+.|++++| ++.+|++++.||.|++|++.+......
T Consensus 345 -~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 345 -DNKRIVSGAYDGKIKVWDLVA-ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp -CSSEEEEEETTSCEEEEEHHH-HTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred -cCCEEEEEeCCCcEEEEECCC-CCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 788999999999999999976 54 78889999999999999 678899999999999999988766555
Q ss_pred eecCCceeEEEE
Q psy8152 313 DYMQSRLTSILV 324 (444)
Q Consensus 313 ~~~~~~i~~~~~ 324 (444)
.....+..++.|
T Consensus 421 ~~~~~~~~~~~~ 432 (435)
T 1p22_A 421 EPPRSPSRTYTY 432 (435)
T ss_dssp ------------
T ss_pred CCCCCCccceee
Confidence 444444444443
No 77
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.4e-38 Score=297.78 Aligned_cols=275 Identities=17% Similarity=0.241 Sum_probs=239.9
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD 119 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 119 (444)
+|...|+++.|. +++|++|+.||.|++||+.+++....+. +|...|.++++++++|++|+.||.|++|++.+++.
T Consensus 131 ~~~~~v~~~~~d---~~~l~~g~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 131 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILT--GHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp SSCCCEEEEECC---SSEEEEEESSSCEEEEESSSCCEEEEEC--CCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCE
T ss_pred CCCCcEEEEEEC---CCEEEEEeCCCeEEEEeCCCCeEEEEEc--CCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcE
Confidence 577889998875 8999999999999999999998887765 78999999999999999999999999999999999
Q ss_pred cccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee---eeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152 120 QWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI---FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL 196 (444)
Q Consensus 120 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 196 (444)
+..+..|...|.+++|+ +.+|++|+.||.|++||+.++..+ ..+.+|.. .|.+++|
T Consensus 206 ~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~------------------~v~~~~~- 264 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA------------------AVNVVDF- 264 (435)
T ss_dssp EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS------------------CEEEEEE-
T ss_pred EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC------------------cEEEEEe-
Confidence 88888899999999996 469999999999999999987654 44555555 7999999
Q ss_pred cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152 197 PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG 276 (444)
Q Consensus 197 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~ 276 (444)
++++|++|+.|+.|++||++ ....+..+..|...|.+++|+ +++|++|+.||.|++||+++ ++++..+.+|..
T Consensus 265 -~~~~l~s~~~dg~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~ 337 (435)
T 1p22_A 265 -DDKYIVSASGDRTIKVWNTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEE 337 (435)
T ss_dssp -ETTEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT-CCEEEEECCCSS
T ss_pred -CCCEEEEEeCCCeEEEEECC---cCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCC-CCEEEEEeCCcC
Confidence 56899999999999999999 788899999999999999994 67999999999999999999 999999999999
Q ss_pred ceeEEEecCCCCEEEEEECCCcEEEEEcCCCc---------eEEEee-cCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152 277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKK---------LLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKG 346 (444)
Q Consensus 277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~---------~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d 346 (444)
.|++++| ++.+|++|+.||.|++||+.+++ ++..+. |...|.+++|. +.++++++.|
T Consensus 338 ~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-----------~~~l~s~s~D 404 (435)
T 1p22_A 338 LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-----------EFQIVSSSHD 404 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC-----------SSCEEECCSS
T ss_pred cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeC-----------CCEEEEEeCC
Confidence 9999999 68899999999999999997765 666654 88899999982 2579999999
Q ss_pred CCccccCCCccccc
Q psy8152 347 DSDEKYDPEHFEMN 360 (444)
Q Consensus 347 ~~i~~W~~~~~~~~ 360 (444)
|.|++|++......
T Consensus 405 g~i~iwd~~~~~~~ 418 (435)
T 1p22_A 405 DTILIWDFLNDPAA 418 (435)
T ss_dssp SEEEEEC-------
T ss_pred CEEEEEECCCCCCc
Confidence 99999999865543
No 78
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.5e-39 Score=290.02 Aligned_cols=247 Identities=12% Similarity=0.141 Sum_probs=202.1
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe----CCCeEEEEecCCcEEEEEcC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR----YDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~----~~~~l~~~~~dg~i~iw~~~ 115 (444)
+|...|++++|+ |++++|++|+.|++|+|||+.++.......+.+|...|.++.+ ++++|++|+.|++|++||+.
T Consensus 11 ~H~~~V~~v~~s-~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 11 SHEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ---CCEEEEEEC-GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred cccCeEEEeeEc-CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 899999999999 7999999999999999999987754333344588888987753 37899999999999999998
Q ss_pred CCC--ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCcee---eeeeecccceeeEeeeCCCcccccCcc
Q psy8152 116 TEP--DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTKN---IFSAKNVSHRVLVYSVKPDEFDLRRPV 188 (444)
Q Consensus 116 ~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (444)
+++ ....+.+|...|.+++|+|+ +.+|++|+.|+.|++|+++.+.. ...+..|..
T Consensus 90 ~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~------------------ 151 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI------------------ 151 (316)
T ss_dssp SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS------------------
T ss_pred CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC------------------
Confidence 874 34356679999999999996 78999999999999999987532 233344444
Q ss_pred ceeEEEEecC-----------------CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC----CEE
Q psy8152 189 WVNGISFLPN-----------------SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS----HYV 247 (444)
Q Consensus 189 ~i~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l 247 (444)
.|.+++|+|+ +++|++|+.|++|++||++......++..+.+|...|.+++|+|++ ++|
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceE
Confidence 5777778776 4689999999999999997111225667788999999999999986 899
Q ss_pred EEEcCCCcEEEEEcCCCCc----ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 248 IVGSTTGDMMAVDLRGKGK----PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 248 ~~~~~dg~i~iwd~~~~~~----~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
++++.|++|+||++.. .. ....+..|...|.+++|+|++++|++++.|++|+||+...
T Consensus 232 as~s~D~~v~iw~~~~-~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDD-ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEETTCEEEEEECSS-TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEccC-ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 9999999999999875 21 2345567889999999999999999999999999999763
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.7e-38 Score=319.88 Aligned_cols=286 Identities=12% Similarity=0.120 Sum_probs=252.4
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
+|...|++++|+ |++.+|++|+.+|.|+||++.+++.+..+. .|..+|.+ ++|++++|++++.+|.|++|++.++
T Consensus 11 ~h~~~v~~i~~s-p~~~~la~~~~~g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 11 NRSDRVKGIDFH-PTEPWVLTTLYSGRVEIWNYETQVEVRSIQ--VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp EECSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEE--CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred cCCCceEEEEEC-CCCCEEEEEeCCCEEEEEECCCCceEEEEe--cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 899999999999 799999999999999999999998888876 55666655 5789999999999999999999999
Q ss_pred CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152 118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL 196 (444)
Q Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 196 (444)
+.+..+..|...|++++|+|++++|++++.||.|++|++.++ .....+..|.. .|++++|+
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~------------------~v~~~~~~ 149 (814)
T 3mkq_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH------------------FVMCVAFN 149 (814)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS------------------CEEEEEEE
T ss_pred cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC------------------cEEEEEEE
Confidence 988878889999999999999999999999999999999986 66677777766 79999999
Q ss_pred c-CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-CCeeEEEEcc--CCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152 197 P-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-VALSCITTTN--QSHYVIVGSTTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 197 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
| ++.+|++++.||.|++||+. ...+...+..+. ..+.+++|+| ++.+|++++.+|.|++||+.+ ++++..+.
T Consensus 150 p~~~~~l~~~~~dg~v~vwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~ 225 (814)
T 3mkq_A 150 PKDPSTFASGCLDRTVKVWSLG---QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLE 225 (814)
T ss_dssp TTEEEEEEEEETTSEEEEEETT---CSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-TEEEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECC---CCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC-CcEEEEEc
Confidence 9 78999999999999999998 566666666554 8899999999 899999999999999999999 99999999
Q ss_pred cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccc
Q psy8152 273 GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEK 351 (444)
Q Consensus 273 ~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~ 351 (444)
+|...|++++|+|++++|++++.||.|++|++.+++.+..+. +...+.+++|+++.. ..+++.+.++.+.+
T Consensus 226 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~~~~ 297 (814)
T 3mkq_A 226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGR--------KNYIASGFDNGFTV 297 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCG--------GGEEEEEETTEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCC--------ceEEEEEeCCCEEE
Confidence 999999999999999999999999999999999999888876 678899999986621 23345556777888
Q ss_pred cCCCccc
Q psy8152 352 YDPEHFE 358 (444)
Q Consensus 352 W~~~~~~ 358 (444)
|++....
T Consensus 298 ~~~~~~~ 304 (814)
T 3mkq_A 298 LSLGNDE 304 (814)
T ss_dssp EECSCCS
T ss_pred EEcCCCC
Confidence 8876543
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-37 Score=291.49 Aligned_cols=284 Identities=11% Similarity=0.175 Sum_probs=239.7
Q ss_pred Ccccc--eEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC
Q psy8152 40 TNKAS--VLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 40 ~h~~~--v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~ 115 (444)
+|... +.++.|+ +..+++++.|+.|++|++.+++....+.. .|...|.++ +|++++|++++.+|.|++|++.
T Consensus 89 ~~~~~~~~~~~~~s---~~~l~~~~~d~~v~lw~~~~~~~~~~~~~-~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 89 GIIDDYYLNLLDWS---NLNVVAVALERNVYVWNADSGSVSALAET-DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TCCCCTTCBCEEEC---TTSEEEEEETTEEEEEETTTCCEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCcCCceEEEEeec---CCCEEEEECCCeEEEeeCCCCcEeEeeec-CCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 44444 3445565 46688899999999999999998877664 366677665 6789999999999999999999
Q ss_pred CCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 116 TEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 116 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
+++.+..+..|...|.+++| ++.+|++++.||.|++||++. ...+..+..|.. .|.+++
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------~v~~~~ 224 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS------------------EVCGLA 224 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS------------------CEEEEE
T ss_pred CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC------------------CeeEEE
Confidence 99988888899999999999 467999999999999999994 666777777776 799999
Q ss_pred EecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC-CEEEEEc--CCCcEEEEEcCCCCcceeEe
Q psy8152 195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS-HYVIVGS--TTGDMMAVDLRGKGKPCYKY 271 (444)
Q Consensus 195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~ 271 (444)
|+|++++|++++.|+.|++||++ ...++..+..|...|.+++|+|++ .++++++ .|+.|++||+.+ ++++..+
T Consensus 225 ~~~~~~~l~s~~~d~~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~ 300 (401)
T 4aez_A 225 WRSDGLQLASGGNDNVVQIWDAR---SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTV 300 (401)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT---CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEccCC---CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEE
Confidence 99999999999999999999999 788888888999999999999976 5666654 799999999999 9998888
Q ss_pred ccccCceeEEEecCCCCEEEEEE--CCCcEEEEEcCCCceEEEe---ecCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152 272 KGFAGCVKDIACPLNENLILSVS--LDRHFRVHDFHSKKLLRKD---YMQSRLTSILVRSDFSLENETKKEEQEHSEEKG 346 (444)
Q Consensus 272 ~~h~~~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d 346 (444)
. |...|++++|+|++++|++++ .||.|++|++.+++..... .|...|.+++|+++ +.++++++.|
T Consensus 301 ~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d---------g~~l~s~~~d 370 (401)
T 4aez_A 301 D-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD---------GRILSTAASD 370 (401)
T ss_dssp E-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT---------SSEEEEECTT
T ss_pred e-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC---------CCEEEEEeCC
Confidence 6 667899999999999999954 8999999999997665543 37889999998854 5789999999
Q ss_pred CCccccCCCcccccc
Q psy8152 347 DSDEKYDPEHFEMNQ 361 (444)
Q Consensus 347 ~~i~~W~~~~~~~~~ 361 (444)
+.|++|++..++...
T Consensus 371 g~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 371 ENLKFWRVYDGDHVK 385 (401)
T ss_dssp SEEEEEECCC-----
T ss_pred CcEEEEECCCCcccc
Confidence 999999998766543
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-37 Score=297.25 Aligned_cols=298 Identities=14% Similarity=0.158 Sum_probs=243.4
Q ss_pred Ccccce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~ 117 (444)
+|...| +++.|. +++|++|+.||.|++|++.+++.+..+. +|...|.++... +.+|++|+.||+|++|++.++
T Consensus 119 ~h~~~v~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~ 193 (464)
T 3v7d_B 119 GHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLS--GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKG 193 (464)
T ss_dssp CCSSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEECSTTEEEEEETTSCEEEEETTTT
T ss_pred CCCCCcEEEEEEC---CCEEEEEcCCCcEEEEECCCCcEEEEEe--CCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCC
Confidence 788775 666665 6899999999999999999999888775 788888887542 239999999999999999999
Q ss_pred CccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc------ccccCccc
Q psy8152 118 PDQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE------FDLRRPVW 189 (444)
Q Consensus 118 ~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 189 (444)
+++..+.+|...|.+++|++ ++.+|++|+.|+.|++||+.++........... .......|.. ....+...
T Consensus 194 ~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 194 CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHD-YPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CC-SSEEESCGGGCTTEEEEECCCSSC
T ss_pred cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCC-cceEeeccCCCeEEEEEccCccce
Confidence 98887888999999999995 778999999999999999998654332211110 0000011100 01112235
Q ss_pred eeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCccee
Q psy8152 190 VNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCY 269 (444)
Q Consensus 190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 269 (444)
|.++ ++++++|++++.|+.|++||++ ...++..+.+|...|.+++|+|++++|++|+.||.|++||+++ ++++.
T Consensus 273 v~~~--~~~~~~l~~~~~d~~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~ 346 (464)
T 3v7d_B 273 VRTV--SGHGNIVVSGSYDNTLIVWDVA---QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN-GELMY 346 (464)
T ss_dssp EEEE--EEETTEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEE
T ss_pred EEEE--cCCCCEEEEEeCCCeEEEEECC---CCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CcEEE
Confidence 6665 6778999999999999999999 8888999999999999999999999999999999999999999 99999
Q ss_pred EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCc
Q psy8152 270 KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSD 349 (444)
Q Consensus 270 ~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i 349 (444)
++.+|...|++++|+ +.+|++++.||.|++|++.++.......+...+..++|.++ +.++++++ |+.|
T Consensus 347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~-dg~i 414 (464)
T 3v7d_B 347 TLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVS---------DNILVSGS-ENQF 414 (464)
T ss_dssp EECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEEC---------SSEEEEEE-TTEE
T ss_pred EEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeC---------CCEEEEec-CCeE
Confidence 999999999999997 57999999999999999999888777777788888888754 56788777 8999
Q ss_pred cccCCCcccccc
Q psy8152 350 EKYDPEHFEMNQ 361 (444)
Q Consensus 350 ~~W~~~~~~~~~ 361 (444)
++|++..++...
T Consensus 415 ~iwd~~~g~~~~ 426 (464)
T 3v7d_B 415 NIYNLRSGKLVH 426 (464)
T ss_dssp EEEETTTCCEEE
T ss_pred EEEECCCCcEEe
Confidence 999999877654
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.4e-38 Score=319.17 Aligned_cols=273 Identities=14% Similarity=0.158 Sum_probs=238.1
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
+++.+|++|+.+|.|++|++.+++. +..+. +|..+|++++|+ |++++|++|+.||.|++|++.+++.+..+.
T Consensus 23 p~~~~la~~~~~g~v~iwd~~~~~~----~~~~~--~~~~~v~~~~~s-~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~- 94 (814)
T 3mkq_A 23 PTEPWVLTTLYSGRVEIWNYETQVE----VRSIQ--VTETPVRAGKFI-ARKNWIIVGSDDFRIRVFNYNTGEKVVDFE- 94 (814)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEE----EEEEE--CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred CCCCEEEEEeCCCEEEEEECCCCce----EEEEe--cCCCcEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEe-
Confidence 4678999999999999999988764 22233 799999999999 799999999999999999999999888775
Q ss_pred ccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC-CccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc
Q psy8152 84 SFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE-PDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT 159 (444)
Q Consensus 84 ~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~ 159 (444)
+|...|.+ ++|++++|++++.||.|++|++.++ .....+..|...|.+++|+| ++..|++++.||.|++||+.++
T Consensus 95 -~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 95 -AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (814)
T ss_dssp -CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred -cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 56666655 5788999999999999999999887 45556677999999999999 8999999999999999999988
Q ss_pred eeeeeeecccceeeEeeeCCCcccccCccceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE
Q psy8152 160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC 237 (444)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 237 (444)
.....+..+.. ..+.+++|+| ++.+|++++.+|.|++||+. ...++..+..|...|++
T Consensus 174 ~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~~~~~~~~~~~~v~~ 233 (814)
T 3mkq_A 174 TPNFTLTTGQE-----------------RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ---TKSCVATLEGHMSNVSF 233 (814)
T ss_dssp SCSEEEECCCT-----------------TCCCEEEECCSTTCCEEEEECTTSEEEEEETT---TTEEEEEEECCSSCEEE
T ss_pred cceeEEecCCC-----------------CCEEEEEEEECCCCCEEEEEeCCCEEEEEECC---CCcEEEEEcCCCCCEEE
Confidence 77766655441 2699999999 88999999999999999999 77888889999999999
Q ss_pred EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCE-EEEEECCCcEEEEEcCC
Q psy8152 238 ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENL-ILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 238 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~-l~s~~~dg~i~vw~~~~ 306 (444)
++|+|++++|++++.||.|++||+.+ ++.+..+..|...|.+++|+|++.. +++++.++.+.+|++..
T Consensus 234 ~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGTLKIWNSST-YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTT-CSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 99999999999999999999999999 9999999999999999999999863 34455577788898764
No 83
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.7e-37 Score=306.83 Aligned_cols=292 Identities=12% Similarity=0.116 Sum_probs=244.4
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccc-eEEEeeecc--CCcEEEEEEcCCeEEEEeCCCC-----
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKAS-VLALNWGNV--EESELLIAYSGQKIKIYDTDFK----- 75 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~--~~~~l~~~~~d~~i~vw~~~~~----- 75 (444)
+++.+|++++ ++.|++|++.++.........+. +|... |++++|+ | ++++|++|+.||.|++|++.++
T Consensus 28 pdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~--~h~~~~v~~~~~s-p~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 103 (615)
T 1pgu_A 28 PTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFT--GHGSSVVTTVKFS-PIKGSQYLCSGDESGKVIVWGWTFDKESNS 103 (615)
T ss_dssp TTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEEC--TTTTSCEEEEEEC-SSTTCCEEEEEETTSEEEEEEEEEEGGGTE
T ss_pred CCCCEEEEec-CCeEEEEECCCCCCccccceEEe--cCCCceEEEEEEC-cCCCCCEEEEecCCCEEEEEeCCCCccccc
Confidence 3556777777 88999999987711001123333 89999 9999999 8 9999999999999999999755
Q ss_pred ---ccccceeeccccccEEEE--EeCCCeEEEEecC----CcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEe
Q psy8152 76 ---NFNTNTDVSFGEGDIVGV--SRYDECILTAVKS----GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATG 145 (444)
Q Consensus 76 ---~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 145 (444)
+....+ ..|...|.++ +|++++|++++.+ +.|++|+ .++.+..+..|...|.+++|+|++. +|+++
T Consensus 104 ~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 179 (615)
T 1pgu_A 104 VEVNVKSEF--QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTV 179 (615)
T ss_dssp EEEEEEEEE--ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred ccccccchh--hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEE
Confidence 344444 4566677655 7899999999987 6888888 5566667888999999999999887 89999
Q ss_pred eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEeCCceEEEEEcCCCCCccc
Q psy8152 146 GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSKQGYVRVYDPKITTQRRP 224 (444)
Q Consensus 146 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~ 224 (444)
+.|+.|++||+.+++.+..+..|.. ....|++++|+|+ +++|++++.|+.|++||++ ..+.
T Consensus 180 ~~d~~v~vwd~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~ 241 (615)
T 1pgu_A 180 GDDGSVVFYQGPPFKFSASDRTHHK---------------QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK---SGEF 241 (615)
T ss_dssp ETTTEEEEEETTTBEEEEEECSSSC---------------TTCCEEEEEECSTTCCEEEEEETTCCEEEEETT---TCCE
T ss_pred eCCCcEEEEeCCCcceeeeecccCC---------------CCceEEEEEECCCCCCEEEEEeCCCeEEEEECC---CCCE
Confidence 9999999999999998888765542 0115999999999 9999999999999999999 7778
Q ss_pred eEEE-e---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc----cCceeEEEecCCCCEEEEEECC
Q psy8152 225 VLKV-D---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF----AGCVKDIACPLNENLILSVSLD 296 (444)
Q Consensus 225 ~~~~-~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h----~~~i~~~~~s~~~~~l~s~~~d 296 (444)
+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++ ++.+..+..+ ...+.++.|+ ++.+|++++.+
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~ 318 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLD 318 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETT
T ss_pred eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECC
Confidence 8887 5 899999999999 999999999999999999999 9999888866 4678888885 88999999999
Q ss_pred CcEEEEEcCCCceEEEee-cCCceeEEEE
Q psy8152 297 RHFRVHDFHSKKLLRKDY-MQSRLTSILV 324 (444)
Q Consensus 297 g~i~vw~~~~~~~~~~~~-~~~~i~~~~~ 324 (444)
+.|++|++.+++++..+. |...|.+++|
T Consensus 319 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 347 (615)
T 1pgu_A 319 GTLNFYELGHDEVLKTISGHNKGITALTV 347 (615)
T ss_dssp SCEEEEETTEEEEEEEECCCSSCEEEEET
T ss_pred CCEEEEECCCCcEEEEEeCCCCCEEEEEe
Confidence 999999999988877765 7788888887
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.1e-37 Score=291.72 Aligned_cols=282 Identities=11% Similarity=0.163 Sum_probs=240.9
Q ss_pred ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152 44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW 121 (444)
Q Consensus 44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 121 (444)
.+..|+|+ + ++.|++|. |++|+|||+.++++...+..++|...|.++ +|+|++|++|+.||.|+||++.+++++.
T Consensus 107 y~~~l~wS-~-~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWS-S-GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEEC-T-TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEEC-C-CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 45779999 4 46777765 899999999999999988888888778765 6889999999999999999999999998
Q ss_pred cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152 122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD 200 (444)
Q Consensus 122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 200 (444)
.+.+|...+.++++ ++.+|++|+.|+.+++|+... ...+..+.+|.. .+..+.|+|+++
T Consensus 184 ~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~------------------~~~~~~~~~~g~ 243 (420)
T 4gga_A 184 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ------------------EVCGLRWAPDGR 243 (420)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS------------------CEEEEEECTTSS
T ss_pred EEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEeccccc------------------ceeeeeecCCCC
Confidence 88899999999887 468999999999999999987 445666777776 799999999999
Q ss_pred EEEEEeCCceEEEEEcCCC-CCccceEEEeCCCCCeeEEEEccCC-CEEEE--EcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152 201 KVAVCSKQGYVRVYDPKIT-TQRRPVLKVDIPDVALSCITTTNQS-HYVIV--GSTTGDMMAVDLRGKGKPCYKYKGFAG 276 (444)
Q Consensus 201 ~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~h~~ 276 (444)
++++++.|+.|++|+.... .....+.....|...|.+++|+|.+ .++++ |+.|++|++||+.+ ++++..+..| .
T Consensus 244 ~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~~~-~ 321 (420)
T 4gga_A 244 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDAH-S 321 (420)
T ss_dssp EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEEEEECS-S
T ss_pred eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccceeeccc-c
Confidence 9999999999999999821 1223556677899999999999975 45554 56899999999999 9999888854 5
Q ss_pred ceeEEEecCCCCEEEEEE--CCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 277 CVKDIACPLNENLILSVS--LDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 277 ~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
.+.++.|+|+++.|++++ .|+.|+||++.+++++..+. |..+|++++|+++ +.+++|++.|++|+||+
T Consensus 322 ~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spd---------g~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 322 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD---------GATVASAAADETLRLWR 392 (420)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT---------SSCEEEEETTTEEEEEC
T ss_pred ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC---------CCEEEEEecCCeEEEEE
Confidence 788999999999888765 78999999999999999886 8999999999854 67899999999999999
Q ss_pred CCcccc
Q psy8152 354 PEHFEM 359 (444)
Q Consensus 354 ~~~~~~ 359 (444)
+.....
T Consensus 393 v~~~~~ 398 (420)
T 4gga_A 393 CFELDP 398 (420)
T ss_dssp CSCSSC
T ss_pred CCCCCc
Confidence 875443
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=292.14 Aligned_cols=330 Identities=12% Similarity=0.103 Sum_probs=224.1
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeec--------ccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK--------YITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN 76 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~--------~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~ 76 (444)
++.+|++|+.+|.|++|++.++.... .+.... ..+|...|++++|+|.++.+|++++.|+.|++|++.+++
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 133 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQS-YYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ 133 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSS-CEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccc-eEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc
Confidence 67899999999999999998876421 111000 015999999999994378899999999999999999988
Q ss_pred cccceeeccccccEEE--EEe---CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCe
Q psy8152 77 FNTNTDVSFGEGDIVG--VSR---YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKEND 150 (444)
Q Consensus 77 ~~~~~~~~~~~~~v~~--~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~ 150 (444)
....+. +...+.+ +++ ++.++++++.++.|++|++.+++.+..+..|...|.+++|+|++. +|++++.||.
T Consensus 134 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~ 210 (408)
T 4a11_B 134 TADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSR 210 (408)
T ss_dssp EEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred cceecc---CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc
Confidence 887775 3344444 444 455999999999999999999988887888999999999999887 5899999999
Q ss_pred EEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152 151 LKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD 229 (444)
Q Consensus 151 i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 229 (444)
|++||++++. ++..+..+..... .........+...|++++|+|++++|++++.|+.|++||+. .......+.
T Consensus 211 i~i~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~ 284 (408)
T 4a11_B 211 VKLWDVRRASGCLITLDQHNGKKS---QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS---NGENTLVNY 284 (408)
T ss_dssp EEEEETTCSSCCSEECCTTTTCSC---CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT---TCCBCCCCC
T ss_pred EEEEECCCCCcccccccccccccc---eeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC---CCccceecc
Confidence 9999998865 4444322211000 00001112234579999999999999999999999999999 443333222
Q ss_pred CC-----CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 230 IP-----DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 230 ~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
.+ ...+........+..+++++.++.|++||+.+ ++++..+.+|...|++++|+|++++|++++.||.|++|++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 285 GKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS-GEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp CCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT-CCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ccccccccccceeEEecCCCceEEEEecCCEEEEEECcC-CcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 21 11222222233455677778899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152 305 HSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE 355 (444)
Q Consensus 305 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~ 355 (444)
.+++++.......... .+.+. ......+.+.++.+++|+..
T Consensus 364 ~~~~~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 364 SLYEPVPDDDETTTKS--QLNPA--------FEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp CC-------------------------------------------------
T ss_pred CCCCccCCCCceEecc--ccccc--------cceeecccCccCceeecCCc
Confidence 9988776543222221 11111 12345567788999999765
No 86
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-38 Score=299.62 Aligned_cols=271 Identities=11% Similarity=0.079 Sum_probs=223.2
Q ss_pred CcccEEEecCCCcEEEEEcCC---CccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC---CCccc
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSK---DKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD---FKNFN 78 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~---~~~~~ 78 (444)
++.+|++|+.||.|++|++.+ +.. +.....+.|...|++++|+ |++.+|++|+.||.|++|++. +++..
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~----~~~~~~~~h~~~v~~~~~~-~~~~~l~s~s~dg~i~vwd~~~~~~~~~~ 149 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEV----YSSSLTYDCSSTVTQITMI-PNFDAFAVSSKDGQIIVLKVNHYQQESEV 149 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCC----CSCSEEEECSSCEEEEEEC-TTSSEEEEEETTSEEEEEEEEEEEETTEE
T ss_pred CCCEEEEecCCceEEEeECcccccCcc----cceeeeccCCCCEEEEEEe-CCCCEEEEEeCCCEEEEEEeccccCCcee
Confidence 678999999999999999976 331 1112222689999999999 799999999999999999994 45444
Q ss_pred ccee--------ecc--ccccEEEE----EeCCCeEEEEecCCcEEEEEcCCCCccccccc--cCCCeEEEEEeccCCEE
Q psy8152 79 TNTD--------VSF--GEGDIVGV----SRYDECILTAVKSGDVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHSNII 142 (444)
Q Consensus 79 ~~~~--------~~~--~~~~v~~~----s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l 142 (444)
..+. ... +...+.++ ++++.+|++++.|+.|++||+.+++++..+.. |...|++++|+|++++|
T Consensus 150 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 229 (437)
T 3gre_A 150 KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVL 229 (437)
T ss_dssp EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEE
T ss_pred eccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEE
Confidence 4332 111 34445554 36788999999999999999999998877776 88999999999999999
Q ss_pred EEeeCCCeEEEEEcCCceeeeeee-cccceeeEeeeCCCcccccCccceeEEEEec----CCCEEEEEeCCceEEEEEcC
Q psy8152 143 ATGGKENDLKLWDLNTTKNIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLP----NSDKVAVCSKQGYVRVYDPK 217 (444)
Q Consensus 143 ~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~d~~i~i~d~~ 217 (444)
++|+.||.|++||+++++++..+. .+.. .|++++|+| ++.+|++++.|+.|++||++
T Consensus 230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 230 ILGTTRGIIDIWDIRFNVLIRSWSFGDHA------------------PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEBCTTCE------------------EEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred EEEcCCCeEEEEEcCCccEEEEEecCCCC------------------ceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 999999999999999999888775 4444 689996665 56799999999999999998
Q ss_pred CCCCccceEEEeC--------------------------CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152 218 ITTQRRPVLKVDI--------------------------PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY 271 (444)
Q Consensus 218 ~~~~~~~~~~~~~--------------------------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 271 (444)
....+..+.. |...|++++|+ ++++|++|+.|+.|++||+.+ ++.+..+
T Consensus 292 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~-~~~~~~~ 366 (437)
T 3gre_A 292 ---KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE-LSSSKAV 366 (437)
T ss_dssp ---TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC-GGGCEEE
T ss_pred ---CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC-cccceEE
Confidence 6666665553 44568889999 778999999999999999999 8877777
Q ss_pred cc-------------------------------------ccCceeEEEecCC--CCEEEEEECCCcEEEEE
Q psy8152 272 KG-------------------------------------FAGCVKDIACPLN--ENLILSVSLDRHFRVHD 303 (444)
Q Consensus 272 ~~-------------------------------------h~~~i~~~~~s~~--~~~l~s~~~dg~i~vw~ 303 (444)
.+ |...|++++|+++ +.+|++|+.||.|+||+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 367 ISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 65 8889999999988 77999999999999995
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-37 Score=284.76 Aligned_cols=276 Identities=9% Similarity=0.051 Sum_probs=235.4
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---cccceeeccccccEEEE--EeCCC-eEEEEecCCcEEEEE
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---FNTNTDVSFGEGDIVGV--SRYDE-CILTAVKSGDVKLWR 113 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~~~~~~v~~~--s~~~~-~l~~~~~dg~i~iw~ 113 (444)
+|...|++++|+ |++.+|++++.|+.|++|++.++. ....+ ..|...|.++ +|+++ +|++++.+|.|++|+
T Consensus 9 ~h~~~v~~~~~s-~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 9 APKDYISDIKII-PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS--LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEEEETTTTEEEEEEE--EECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred CCCCcEEEEEEc-CCCCEEEEEcCCCeEEEEEeCCCCccccceee--eecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 799999999999 799999999999999999998776 12222 2666677655 78999 999999999999999
Q ss_pred c-CCCCccccccc--cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC---------ceeeeeeecccceeeEeeeCCCc
Q psy8152 114 Y-KTEPDQWTNFN--VGPQLECMKHNKHSNIIATGGKENDLKLWDLNT---------TKNIFSAKNVSHRVLVYSVKPDE 181 (444)
Q Consensus 114 ~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 181 (444)
+ .+++.. .+.. |...|.+++|+| +.+|++++.|+.|++||+++ ++++..+. +..
T Consensus 86 ~~~~~~~~-~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~----------- 151 (342)
T 1yfq_A 86 LIGSPSFQ-ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN----------- 151 (342)
T ss_dssp SSSSSSEE-ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC-----------
T ss_pred eccCCceE-eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC-----------
Confidence 9 877664 5777 999999999999 99999999999999999987 55555544 333
Q ss_pred ccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC-CCccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEE
Q psy8152 182 FDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT-TQRRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAV 259 (444)
Q Consensus 182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw 259 (444)
.|.+++|+|++ |++++.++.|++||++ . ...........+...+.+++|+| ++++|++++.+|.|++|
T Consensus 152 -------~v~~~~~~~~~--l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 152 -------KIFTMDTNSSR--LIVGMNNSQVQWFRLP-LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221 (342)
T ss_dssp -------CEEEEEECSSE--EEEEESTTEEEEEESS-CCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred -------ceEEEEecCCc--EEEEeCCCeEEEEECC-ccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEE
Confidence 69999999876 9999999999999999 2 22333444557788999999999 99999999999999999
Q ss_pred EcCCCC------cceeEeccccC---------ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-c-CCceeEE
Q psy8152 260 DLRGKG------KPCYKYKGFAG---------CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-M-QSRLTSI 322 (444)
Q Consensus 260 d~~~~~------~~~~~~~~h~~---------~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~-~~~i~~~ 322 (444)
++.. . +++..+..|.. .|++++|+|++++|++++.||.|++||+.+++++..+. | ..+|.++
T Consensus 222 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~ 300 (342)
T 1yfq_A 222 FFDD-QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300 (342)
T ss_dssp ECCT-TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEE
T ss_pred EEcC-CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEe
Confidence 9988 6 88888888865 99999999999999999999999999999999988876 5 8889988
Q ss_pred EEcCCCcccccchhhhhccccccCCC-ccccCC
Q psy8152 323 LVRSDFSLENETKKEEQEHSEEKGDS-DEKYDP 354 (444)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~s~~~d~~-i~~W~~ 354 (444)
+ + ++.++++++.|+. .+.|..
T Consensus 301 ~--~---------~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 301 A--C---------SDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp E--E---------CSSEEEEEEECTHHHHCSSS
T ss_pred c--C---------CCCeEEEEecCCcccccccc
Confidence 7 2 2478999999999 777764
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-38 Score=296.03 Aligned_cols=273 Identities=10% Similarity=0.151 Sum_probs=208.3
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-ccccee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-FNTNTD 82 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~ 82 (444)
+++.+|++|+.+|.|++|++.++.. .....+. +|...|++++|+ |++++|++++.|+.|++|++.+++ ......
T Consensus 21 ~~g~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~--~h~~~v~~~~~s-~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 21 SQRTEFVTTTATNQVELYEQDGNGW--KHARTFS--DHDKIVTCVDWA-PKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp SSSSEEECCCSSSCBCEEEEETTEE--EECCCBC--CCSSCEEEEEEC-TTTCCEEEEETTSSEEEC------CCCCEEE
T ss_pred CCCCEEEEecCCCEEEEEEccCCce--EEEEEEe--cCCceEEEEEEe-CCCCEEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence 3668899999999999999987731 1122222 899999999999 799999999999999999999877 333334
Q ss_pred eccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCc---cccccc-cCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152 83 VSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPD---QWTNFN-VGPQLECMKHNKHSNIIATGGKENDLKLWDL 156 (444)
Q Consensus 83 ~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~ 156 (444)
...|...|.++ +|++++|++++.|+.|++|++.+++. ...+.. |...|.+++|+|++++|++++.|+.|++||+
T Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 45778888776 57899999999999999999998763 445556 9999999999999999999999999999999
Q ss_pred CC------------------ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC
Q psy8152 157 NT------------------TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI 218 (444)
Q Consensus 157 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 218 (444)
.. ++++..+ .|.. .|++++|+|++++|++++.|+.|++||+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------~v~~~~~sp~~~~l~~~~~d~~i~iwd~~- 235 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG------------------WVHAVGFSPSGNALAYAGHDSSVTIAYPS- 235 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS------------------SEEEEEECTTSSCEEEEETTTEEC-CEEC-
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCc------------------eEEEEEECCCCCEEEEEeCCCcEEEEECC-
Confidence 63 3334333 3333 79999999999999999999999999999
Q ss_pred CCCccc----eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC-cc-------------------------e
Q psy8152 219 TTQRRP----VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG-KP-------------------------C 268 (444)
Q Consensus 219 ~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~-------------------------~ 268 (444)
.... +..+..|...|.+++|+|++++|++|+.++.+ +|+....+ +. .
T Consensus 236 --~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (377)
T 3dwl_C 236 --APEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEE 312 (377)
T ss_dssp --STTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-
T ss_pred --CCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccc
Confidence 5554 77788999999999999999999999876655 66654201 00 0
Q ss_pred ---------eEe----------------ccccCceeEEEecCCC-C---EEEEEECCCcEEEEEc
Q psy8152 269 ---------YKY----------------KGFAGCVKDIACPLNE-N---LILSVSLDRHFRVHDF 304 (444)
Q Consensus 269 ---------~~~----------------~~h~~~i~~~~~s~~~-~---~l~s~~~dg~i~vw~~ 304 (444)
..+ ..|...|+++++.+.. . .|+|++.||.|+||++
T Consensus 313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 313 GPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 011 1389999999976543 3 6999999999999985
No 89
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=298.19 Aligned_cols=278 Identities=13% Similarity=0.207 Sum_probs=221.1
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-----------cccceeecccc------------ccEEE--EE
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-----------FNTNTDVSFGE------------GDIVG--VS 94 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-----------~~~~~~~~~~~------------~~v~~--~s 94 (444)
.|.+.|++++|+ |++.+||+|+.||.|+||++.+++ +...+. +|. ..|.+ ++
T Consensus 26 ~~~~~V~~v~~s-~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~--~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 26 AEADIISTVEFN-HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ--SHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp CGGGSEEEEEEC-SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE--CCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cccCcEEEEEEC-CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc--cccccccccccccccCceEEEEEc
Confidence 578999999999 799999999999999999998776 344444 565 55654 56
Q ss_pred eCC--CeEEEEecCCcEEEEEcCCCCcc----------------------------------------ccccccCCCeEE
Q psy8152 95 RYD--ECILTAVKSGDVKLWRYKTEPDQ----------------------------------------WTNFNVGPQLEC 132 (444)
Q Consensus 95 ~~~--~~l~~~~~dg~i~iw~~~~~~~~----------------------------------------~~~~~~~~~v~~ 132 (444)
|++ .+|++++.|+.|++|++.++... ....+|...|.+
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 776 78999999999999998764331 113569999999
Q ss_pred EEEeccCCEEEEeeCCCeEEEEEcCC-ceeeee-------eecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEE
Q psy8152 133 MKHNKHSNIIATGGKENDLKLWDLNT-TKNIFS-------AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVA 203 (444)
Q Consensus 133 ~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~ 203 (444)
++|+|++++|++| .|+.|++||+++ ++.+.. +..|.. .|++++|+|++ ++|+
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~p~~~~~l~ 243 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE------------------VITAAEFHPNSCNTFV 243 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC------------------CEEEEEECSSCTTEEE
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc------------------ceEEEEECCCCCcEEE
Confidence 9999999999998 799999999995 434332 223333 79999999998 9999
Q ss_pred EEeCCceEEEEEcCCCCCccc----eEEEeCCCC------------CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc
Q psy8152 204 VCSKQGYVRVYDPKITTQRRP----VLKVDIPDV------------ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP 267 (444)
Q Consensus 204 ~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 267 (444)
+++.|+.|++||++ .... +..+..|.. .|.+++|+|++++|++++. +.|++||++..+++
T Consensus 244 s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~ 319 (447)
T 3dw8_B 244 YSSSKGTIRLCDMR---ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP 319 (447)
T ss_dssp EEETTSCEEEEETT---TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC
T ss_pred EEeCCCeEEEEECc---CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc
Confidence 99999999999999 4444 677787775 8999999999999999998 99999999864788
Q ss_pred eeEeccccCc---------------eeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEe-------------------
Q psy8152 268 CYKYKGFAGC---------------VKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKD------------------- 313 (444)
Q Consensus 268 ~~~~~~h~~~---------------i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~------------------- 313 (444)
+..+.+|... +..++|+|++++|++++.||.|++|++.+++.+...
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (447)
T 3dw8_B 320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCA 399 (447)
T ss_dssp SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEEC
T ss_pred cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccc
Confidence 8888888642 234899999999999999999999999998876422
Q ss_pred --------------ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 314 --------------YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 314 --------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
.+...|..++|+|+ +.++++++.++ +.+|.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~i~~~~~~p~---------~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 400 SGKRKKDEISVDSLDFNKKILHTAWHPK---------ENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp SSCCCTTCEEGGGCCTTSCCCEEEECSS---------SSEEEEECSSC-EEEEE
T ss_pred cCCcccccccccccccCCceeEEEECCC---------CCEEEEEecce-eeeec
Confidence 22345777887754 56777776654 66775
No 90
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.5e-37 Score=291.80 Aligned_cols=276 Identities=14% Similarity=0.224 Sum_probs=248.7
Q ss_pred Ccccce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152 40 TNKASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP 118 (444)
Q Consensus 40 ~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 118 (444)
+|...| +++.+ ++++|++|+.||.|++|++.+++.+..+. +|...|.++.+++++|++++.||+|++|++.+++
T Consensus 116 ~h~~~v~~~~~~---~g~~l~sg~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 190 (445)
T 2ovr_B 116 GHDDHVITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLV--GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGE 190 (445)
T ss_dssp CSTTSCEEEEEE---ETTEEEEEETTSCEEEEETTTCCEEEECC--CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred ccCCCcEEEEEE---cCCEEEEEECCCcEEEEECCCCcEEEEEc--CCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCc
Confidence 788865 55554 48999999999999999999999887775 7899999998889999999999999999999999
Q ss_pred ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152 119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN 198 (444)
Q Consensus 119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 198 (444)
.+..+..|...|.+++|+ ++.|++|+.||.|++||+.+++.+..+..+.. .|.+++| +
T Consensus 191 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~------------------~v~~~~~--~ 248 (445)
T 2ovr_B 191 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVA------------------AVRCVQY--D 248 (445)
T ss_dssp EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSS------------------CEEEEEE--C
T ss_pred EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc------------------cEEEEEE--C
Confidence 888888899999999995 57899999999999999999999988888777 7999998 6
Q ss_pred CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCce
Q psy8152 199 SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCV 278 (444)
Q Consensus 199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i 278 (444)
+++|++++.|+.|++||++ ...++..+.+|...|.+++| ++.+|++++.||.|++||+++ ++++..+.+|...+
T Consensus 249 ~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v 322 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLT 322 (445)
T ss_dssp SSCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT-CCEEEEECCCCSCE
T ss_pred CCEEEEEcCCCEEEEEECC---CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC-CCEEEEEcCCcccE
Confidence 7899999999999999999 78888999999999999999 788999999999999999999 99999999999999
Q ss_pred eEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152 279 KDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP 354 (444)
Q Consensus 279 ~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~ 354 (444)
.++.++ +++|++++.||.|++||+.+++++..+. |...|.+++|.+ .++++++.||.|++|++
T Consensus 323 ~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-----------~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 323 SGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-----------NFVITSSDDGTVKLWDL 389 (445)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-----------SEEEEEETTSEEEEEET
T ss_pred EEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC-----------CEEEEEeCCCeEEEEEC
Confidence 988874 6799999999999999999999988875 677899998852 47999999999999999
Q ss_pred Ccccccc
Q psy8152 355 EHFEMNQ 361 (444)
Q Consensus 355 ~~~~~~~ 361 (444)
..++...
T Consensus 390 ~~~~~~~ 396 (445)
T 2ovr_B 390 KTGEFIR 396 (445)
T ss_dssp TTCCEEE
T ss_pred CCCceee
Confidence 9776554
No 91
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-37 Score=286.97 Aligned_cols=278 Identities=10% Similarity=0.112 Sum_probs=213.2
Q ss_pred CCcccEEEecCC-------CcEEEEEcCCCccc----eeeeeeecccCcccceEEEeeeccCCcEEEEE-----------
Q psy8152 4 ADDYNIYIGSST-------GAFKGVNLSKDKCI----IKNIQNVKYITNKASVLALNWGNVEESELLIA----------- 61 (444)
Q Consensus 4 ~~~~~l~~g~~d-------g~i~i~~~~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~----------- 61 (444)
+++.+|++|+.+ +.|++|++...... ......+...+|...|.+++++ ++.+++|
T Consensus 24 ~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~---~~~~~~g~~~~~~~l~s~ 100 (365)
T 4h5i_A 24 NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS---KGIILVGCNENSTKITQG 100 (365)
T ss_dssp ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE---TTEEEEECCCCHHHHHHT
T ss_pred CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC---CCEEEEEECCCccEEEEe
Confidence 456788888643 35999999766531 1111222222788899999877 5566665
Q ss_pred EcCCeEEEEeCCCCccccce-------eeccc--cccEEEEEeCCCeEEEEe--cCCcEEEEEcCCCCccccccccCCCe
Q psy8152 62 YSGQKIKIYDTDFKNFNTNT-------DVSFG--EGDIVGVSRYDECILTAV--KSGDVKLWRYKTEPDQWTNFNVGPQL 130 (444)
Q Consensus 62 ~~d~~i~vw~~~~~~~~~~~-------~~~~~--~~~v~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~v 130 (444)
+.|+.+++|++.+......+ ....+ ...+++|+|+|+++++++ .|++|+|||+.+++++. ...|...|
T Consensus 101 ~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~-~~~~~~~V 179 (365)
T 4h5i_A 101 KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF-EIETRGEV 179 (365)
T ss_dssp SCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE-EEECSSCC
T ss_pred cCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE-EeCCCCce
Confidence 45788999998654322111 11111 234678899999987654 68999999999998886 45688899
Q ss_pred EEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeee--ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC
Q psy8152 131 ECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSA--KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ 208 (444)
Q Consensus 131 ~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 208 (444)
.+++|+|++++|++++.+ .+++|+..+++.+... ..+.. .|++++|+|+++++++++.+
T Consensus 180 ~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~v~fspdg~~l~~~s~d 240 (365)
T 4h5i_A 180 KDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNW------------------SLSKINFIADDTVLIAASLK 240 (365)
T ss_dssp CEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTE------------------EEEEEEEEETTEEEEEEEES
T ss_pred EEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCC------------------CEEEEEEcCCCCEEEEEecC
Confidence 999999999999999855 5677777776655433 23333 69999999999999999888
Q ss_pred c----eEEEEEcCCCCCc--cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe-ccccCceeEE
Q psy8152 209 G----YVRVYDPKITTQR--RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY-KGFAGCVKDI 281 (444)
Q Consensus 209 ~----~i~i~d~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~h~~~i~~~ 281 (444)
+ .+++|++. .... .....+..|...|++++|+|+|++||+|+.|++|+|||+++ ++++.++ .+|..+|++|
T Consensus 241 ~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 241 KGKGIVLTKISIK-SGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAITEV 318 (365)
T ss_dssp SSCCEEEEEEEEE-TTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEETTSSSSCEEEE
T ss_pred CcceeEEeecccc-cceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC-CcEEEEecCcccCCEEEE
Confidence 7 68899987 1111 22455778999999999999999999999999999999999 9999885 6899999999
Q ss_pred EecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 282 ACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 282 ~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
+|+|++++||||+.|++|+||++..
T Consensus 319 ~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 319 TISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EECTTSCEEEEEETTSEEEEEECCT
T ss_pred EECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999999999965
No 92
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.4e-37 Score=278.79 Aligned_cols=243 Identities=14% Similarity=0.118 Sum_probs=203.3
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC--CccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcC
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE--PDQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLN 157 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~ 157 (444)
.+|...|.++ +|++++|++|+.|++|+||++... +++..+.+|..+|++++|+| ++++|++|+.|++|++||+.
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 4778888654 688999999999999999999743 55667788999999999986 48999999999999999998
Q ss_pred Cce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152 158 TTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV 233 (444)
Q Consensus 158 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 233 (444)
+++ .+..+..|.. .|++++|+|+ +.+|++++.|++|++||++ .........+.+|..
T Consensus 86 ~~~~~~~~~~~~h~~------------------~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~-~~~~~~~~~~~~h~~ 146 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSA------------------SVNSVQWAPHEYGPMLLVASSDGKVSVVEFK-ENGTTSPIIIDAHAI 146 (297)
T ss_dssp SSCBCCCEEECCCSS------------------CEEEEEECCGGGCSEEEEEETTSEEEEEEBC-SSSCBCCEEEECCSS
T ss_pred CCceEEEEEeecCCC------------------ceeEEEeCcCCCCcEEEEEECCCcEEEEEec-CCCceeeeeeecccC
Confidence 864 4455555555 7999999997 7899999999999999998 222223456789999
Q ss_pred CeeEEEEccC-------------CCEEEEEcCCCcEEEEEcCCCCc----ceeEeccccCceeEEEecCCC---CEEEEE
Q psy8152 234 ALSCITTTNQ-------------SHYVIVGSTTGDMMAVDLRGKGK----PCYKYKGFAGCVKDIACPLNE---NLILSV 293 (444)
Q Consensus 234 ~i~~~~~~~~-------------~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~h~~~i~~~~~s~~~---~~l~s~ 293 (444)
.|.+++|+|+ +++|++|+.|+.|+|||++. +. ++..+.+|...|++++|+|++ .+|+++
T Consensus 147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~-~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS-DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp CEEEEEECCCC------------CCEEEEEETTSCEEEEEEET-TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC-CCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 9999999997 57999999999999999987 65 567888999999999999985 799999
Q ss_pred ECCCcEEEEEcCCCc--eEE-Ee---ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152 294 SLDRHFRVHDFHSKK--LLR-KD---YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE 355 (444)
Q Consensus 294 ~~dg~i~vw~~~~~~--~~~-~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~ 355 (444)
+.|++|+||++.+.. ... .+ .+...|.+++|+++ +.++++++.|+.|+||+..
T Consensus 226 s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS---------SCCEEEEETTSCEEEEEEC
T ss_pred ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCC---------CCEEEEEcCCCcEEEEEEC
Confidence 999999999998743 111 22 36678999998854 5789999999999999865
No 93
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.2e-38 Score=292.78 Aligned_cols=309 Identities=13% Similarity=0.093 Sum_probs=247.4
Q ss_pred CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCccccceee----------
Q psy8152 15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFKNFNTNTDV---------- 83 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~---------- 83 (444)
++.+++|++...+. ...+. +|.+.|++++|+ | ++++|++|+.||.|++|++.++.....+..
T Consensus 22 ~~~~~v~~~~~~~~----~~~~~--~h~~~v~~~~~s-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 94 (408)
T 4a11_B 22 ESTRRVLGLELNKD----RDVER--IHGGGINTLDIE-PVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDH 94 (408)
T ss_dssp HHHHHHHTEEECTT----EEECC--CCSSCEEEEEEC-TTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTC
T ss_pred cCcceeeccccCcc----eeeee--ccCCcEEEEEEe-cCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccc
Confidence 44566777665553 12222 799999999999 7 999999999999999999998877766542
Q ss_pred -ccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEc
Q psy8152 84 -SFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK---HSNIIATGGKENDLKLWDL 156 (444)
Q Consensus 84 -~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~ 156 (444)
.+|...|.++ +| ++.+|++++.+|.|++|++.+++... ...+...+.+++|+| ++.++++++.++.|++||+
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTAD-VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccce-eccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 1377778776 45 66799999999999999999988875 556888999999998 4459999999999999999
Q ss_pred CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceEEE-------
Q psy8152 157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVLKV------- 228 (444)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~------- 228 (444)
++++.+..+..|.. .|++++|+|++. +|++++.||.|++||++ ....++..+
T Consensus 174 ~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~ 233 (408)
T 4a11_B 174 KSGSCSHILQGHRQ------------------EILAVSWSPRYDYILATASADSRVKLWDVR--RASGCLITLDQHNGKK 233 (408)
T ss_dssp SSSCCCEEECCCCS------------------CEEEEEECSSCTTEEEEEETTSCEEEEETT--CSSCCSEECCTTTTCS
T ss_pred CCcceeeeecCCCC------------------cEEEEEECCCCCcEEEEEcCCCcEEEEECC--CCCccccccccccccc
Confidence 99998888887776 799999999997 68999999999999998 122233333
Q ss_pred --------eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-----CceeEEEecCCCCEEEEEEC
Q psy8152 229 --------DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-----GCVKDIACPLNENLILSVSL 295 (444)
Q Consensus 229 --------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-----~~i~~~~~s~~~~~l~s~~~ 295 (444)
..|...|.+++|+|++++|++++.||.|++||+.+ ++.+..+..+. ..+........+..+++++.
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN-GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY 312 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE
T ss_pred ceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC-CccceeccccccccccccceeEEecCCCceEEEEec
Confidence 56888999999999999999999999999999998 77665554321 22222233334566777788
Q ss_pred CCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152 296 DRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ 361 (444)
Q Consensus 296 dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~ 361 (444)
++.|++|++.+++++..+. |...|.+++|+++ +.++++++.||.|++|++...+...
T Consensus 313 ~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 313 GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN---------FQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp TTEEEEEETTTCCEEEEECCCSSCEEEEEEETT---------TTEEEEEETTSCEEEEEECC-----
T ss_pred CCEEEEEECcCCcceeeeccCCCeEEEEEEcCC---------CCEEEEECCCCeEEEEeCCCCCccC
Confidence 9999999999999998887 8899999999854 5789999999999999998776544
No 94
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.5e-37 Score=281.53 Aligned_cols=266 Identities=17% Similarity=0.167 Sum_probs=217.2
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc--cceeeccccccEEEEE--e--CCCeEEEEecCCcEEEEE
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN--TNTDVSFGEGDIVGVS--R--YDECILTAVKSGDVKLWR 113 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~--~~~~~~~~~~~v~~~s--~--~~~~l~~~~~dg~i~iw~ 113 (444)
+|...|++++|+ |++.+|++|+.||.|++|++.++... ......+|...|.++. | ++++|++++.||.|++|+
T Consensus 9 gH~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 9 GHDDLVHDVVYD-FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ccccceeEEEEc-CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 899999999999 79999999999999999999876422 1222347788887764 5 589999999999999999
Q ss_pred cCCCC---------ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc
Q psy8152 114 YKTEP---------DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF 182 (444)
Q Consensus 114 ~~~~~---------~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (444)
+.+++ .+..+..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+.... ......+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~--- 163 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS-EMKVLSIPP--- 163 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE-EEESCSCCC---
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc-ccccccccc---
Confidence 98873 34456679999999999998 9999999999999999999877654443211 111111111
Q ss_pred cccCccceeEEEEecC---CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC----CEEEEEcCCCc
Q psy8152 183 DLRRPVWVNGISFLPN---SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS----HYVIVGSTTGD 255 (444)
Q Consensus 183 ~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~ 255 (444)
..+...+.+++|+|+ +.+|++++.++.+.+|+.. ......+..+.+|...|++++|+|++ ++|++|+.||.
T Consensus 164 -~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 164 -ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK-DGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp -SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT-TSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred -CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC-CCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 123346999999997 7999999999999888877 33334577788899999999999998 89999999999
Q ss_pred EEEEEcCCCC----------------------------------------------cceeEeccccCceeEEEecCCCCE
Q psy8152 256 MMAVDLRGKG----------------------------------------------KPCYKYKGFAGCVKDIACPLNENL 289 (444)
Q Consensus 256 i~iwd~~~~~----------------------------------------------~~~~~~~~h~~~i~~~~~s~~~~~ 289 (444)
|++||++. + +++..+.+|...|++++|+|++++
T Consensus 242 i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 320 (351)
T 3f3f_A 242 IRIFKITE-KLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTI 320 (351)
T ss_dssp EEEEEEEE-CC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCC
T ss_pred EEEEeCCC-CcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCE
Confidence 99999986 4 567778899999999999999999
Q ss_pred EEEEECCCcEEEEEcCCCceEEEe
Q psy8152 290 ILSVSLDRHFRVHDFHSKKLLRKD 313 (444)
Q Consensus 290 l~s~~~dg~i~vw~~~~~~~~~~~ 313 (444)
|++++.||.|+||++.+++.+..+
T Consensus 321 l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 321 LSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEecCCCcEEEEecCcCcchhhe
Confidence 999999999999999987665543
No 95
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=272.65 Aligned_cols=280 Identities=11% Similarity=0.147 Sum_probs=234.3
Q ss_pred ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152 44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQW 121 (444)
Q Consensus 44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 121 (444)
.+.+|+|| ++ ++|++| .|++|+|||+.+++++..+..++|...|.++ +|++++|++|+.||+|++|++.+++++.
T Consensus 27 y~~~l~WS-~~-~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 27 YLNLVDWS-SG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp TCBCEEEC-TT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred cceEEEEC-CC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 35789999 45 466665 5899999999999999998888888888765 6889999999999999999999999988
Q ss_pred cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152 122 TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD 200 (444)
Q Consensus 122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 200 (444)
.+..|...+.++.+ ++.++++++.++.+++|+.... ..+..+..|.. .+..+.++++++
T Consensus 104 ~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~ 163 (318)
T 4ggc_A 104 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ------------------EVCGLRWAPDGR 163 (318)
T ss_dssp EEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS------------------CEEEEEECTTSS
T ss_pred EecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccC------------------ceEEEEEcCCCC
Confidence 88889888877655 5689999999999999999874 45566666666 799999999999
Q ss_pred EEEEEeCCceEEEEEcCCCC-CccceEEEeCCCCCeeEEEEccCCCE---EEEEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152 201 KVAVCSKQGYVRVYDPKITT-QRRPVLKVDIPDVALSCITTTNQSHY---VIVGSTTGDMMAVDLRGKGKPCYKYKGFAG 276 (444)
Q Consensus 201 ~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~---l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~ 276 (444)
+|++++.|+.|++||+++.. ..........+...|.+++++|.+.. +++++.++.|++|+... ........ +..
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~-~~~~~~~~-~~~ 241 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVD-AHS 241 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT-CCEEEEEE-CSS
T ss_pred EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc-cccccccc-cee
Confidence 99999999999999998211 12334556678889999999997643 34678899999999998 66655544 677
Q ss_pred ceeEEEecCCCCEEEEEE--CCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 277 CVKDIACPLNENLILSVS--LDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 277 ~i~~~~~s~~~~~l~s~~--~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
.+..+.|+|.+..+++++ .|+.|+|||+.+++++.++. |...|++++|+++ +.+++|++.|++|+||+
T Consensus 242 ~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd---------g~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 242 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD---------GATVASAAADETLRLWR 312 (318)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT---------SSCEEEEETTTEEEEEC
T ss_pred eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC---------CCEEEEEecCCeEEEEE
Confidence 899999999999887765 79999999999999999886 8999999999854 67899999999999999
Q ss_pred CCcc
Q psy8152 354 PEHF 357 (444)
Q Consensus 354 ~~~~ 357 (444)
+...
T Consensus 313 ~~~~ 316 (318)
T 4ggc_A 313 CFEL 316 (318)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 8653
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.6e-37 Score=287.77 Aligned_cols=276 Identities=12% Similarity=0.100 Sum_probs=224.5
Q ss_pred cEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCc-------ccc
Q psy8152 8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-EESELLIAYSGQKIKIYDTDFKN-------FNT 79 (444)
Q Consensus 8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~-------~~~ 79 (444)
.+++++.+|.|++|++.........+..+. +|...|++++|+ | ++.+|++|+.||.|+||++.++. .+.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~--~h~~~V~~~~~~-p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~ 125 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVC--GHTAPVLDIAWC-PHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVI 125 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBC--CCSSCEEEEEEC-TTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEe--cCCCCEEEEEeC-CCCCCEEEEEeCCCeEEEEEccCCCCccccCCceE
Confidence 445578999999999966532112222222 899999999999 6 89999999999999999998873 344
Q ss_pred ceeeccccccEEEE--EeCC-CeEEEEecCCcEEEEEcCCCCccccc--cccCCCeEEEEEeccCCEEEEeeCCCeEEEE
Q psy8152 80 NTDVSFGEGDIVGV--SRYD-ECILTAVKSGDVKLWRYKTEPDQWTN--FNVGPQLECMKHNKHSNIIATGGKENDLKLW 154 (444)
Q Consensus 80 ~~~~~~~~~~v~~~--s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 154 (444)
.+ .+|...|.++ +|++ .+|++++.|+.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.|+.|++|
T Consensus 126 ~~--~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 203 (402)
T 2aq5_A 126 TL--EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVI 203 (402)
T ss_dssp EE--ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred Ee--cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEE
Confidence 44 4677777665 6776 68999999999999999999888766 6799999999999999999999999999999
Q ss_pred EcCCceeeeee-ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE---eCCceEEEEEcCCCCCcc-ceEEEe
Q psy8152 155 DLNTTKNIFSA-KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC---SKQGYVRVYDPKITTQRR-PVLKVD 229 (444)
Q Consensus 155 d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~-~~~~~~ 229 (444)
|+++++.+..+ ..+.. ..+.+++|+|++.+|++| +.++.|++||++ ... ++....
T Consensus 204 d~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~---~~~~~~~~~~ 263 (402)
T 2aq5_A 204 EPRKGTVVAEKDRPHEG-----------------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTK---HLEEPLSLQE 263 (402)
T ss_dssp ETTTTEEEEEEECSSCS-----------------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETT---BCSSCSEEEE
T ss_pred eCCCCceeeeeccCCCC-----------------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCc---cccCCceEEe
Confidence 99999988887 55554 138899999999999999 799999999999 322 233332
Q ss_pred -CCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcc-eeEecc--ccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 230 -IPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKP-CYKYKG--FAGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 230 -~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~-~~~~~~--h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
.+...+.+++|+|++++|+ +|+.||.|++|++.+ +++ +..+.. |..+|++++|+|++.++++ .++.+++|++
T Consensus 264 ~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~-~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 264 LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS-EAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS-STTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC-CCcceEeecccccCCcccceEEeccccccee--cceeEEEEEc
Confidence 5677899999999999986 566899999999998 764 555554 4589999999999988775 5679999999
Q ss_pred CCCceEE
Q psy8152 305 HSKKLLR 311 (444)
Q Consensus 305 ~~~~~~~ 311 (444)
.++++..
T Consensus 341 ~~~~~~~ 347 (402)
T 2aq5_A 341 HERKCEP 347 (402)
T ss_dssp ETTEEEE
T ss_pred CCCcEEE
Confidence 9876543
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=280.50 Aligned_cols=278 Identities=12% Similarity=0.173 Sum_probs=231.3
Q ss_pred CcccceEEEeeeccC---CcEEEEEEcCCeEEEEeCCC-Cccc-cceeeccccccEEEE--EeCCCeEEEEecCCcEEEE
Q psy8152 40 TNKASVLALNWGNVE---ESELLIAYSGQKIKIYDTDF-KNFN-TNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLW 112 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~---~~~l~~~~~d~~i~vw~~~~-~~~~-~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw 112 (444)
+|...|++++|+ |+ +.+|++|+.||.|+||++.+ +... ..+ .+|...|.++ +|++++|++++.||.|++|
T Consensus 37 ~h~~~v~~~~~~-~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 37 SPDDSIGCLSFS-PPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ--QMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CCSSCEEEEEEC-CTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE--EECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCCceEEEEEc-CCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe--ccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 899999999999 66 69999999999999999987 4443 333 4677777665 6789999999999999999
Q ss_pred EcCCCCccccccccCCCeEEEEE--eccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152 113 RYKTEPDQWTNFNVGPQLECMKH--NKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV 190 (444)
Q Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (444)
++.+++.+. ...|...|.+++| +|++.+|++++.|+.|++||+++++++..+..+.. +
T Consensus 114 d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-------------------~ 173 (368)
T 3mmy_A 114 DLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER-------------------C 173 (368)
T ss_dssp ETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC-------------------E
T ss_pred EcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC-------------------c
Confidence 999988775 7789999999999 78999999999999999999999988888776554 6
Q ss_pred eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc-eEEE-eCCCCCeeEEEEccCCCE----EEEEcCCCcEEEEEcCCC
Q psy8152 191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP-VLKV-DIPDVALSCITTTNQSHY----VIVGSTTGDMMAVDLRGK 264 (444)
Q Consensus 191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~-~~~~~~i~~~~~~~~~~~----l~~~~~dg~i~iwd~~~~ 264 (444)
.++.+.+ ..+++++.++.+++|+++ .... ...+ ..+...+.++++.+.... +++++.+|.|++|+++.
T Consensus 174 ~~~~~~~--~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~- 247 (368)
T 3mmy_A 174 YCADVIY--PMAVVATAERGLIVYQLE---NQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINP- 247 (368)
T ss_dssp EEEEEET--TEEEEEEGGGCEEEEECS---SSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSC-
T ss_pred eEEEecC--CeeEEEeCCCcEEEEEec---cccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCC-
Confidence 7777765 588889999999999998 3222 2222 233455667777665544 99999999999999998
Q ss_pred C---cceeEeccccC------------ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCC
Q psy8152 265 G---KPCYKYKGFAG------------CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDF 328 (444)
Q Consensus 265 ~---~~~~~~~~h~~------------~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~ 328 (444)
. ..+..+.+|.. +|++++|+|++++|++++.||.|++|++.+++++..+. |..+|.+++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~- 326 (368)
T 3mmy_A 248 PNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHN- 326 (368)
T ss_dssp SCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTT-
T ss_pred CCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCC-
Confidence 6 56778888776 79999999999999999999999999999999988876 7889999999854
Q ss_pred cccccchhhhhccccccCCCccccCCC
Q psy8152 329 SLENETKKEEQEHSEEKGDSDEKYDPE 355 (444)
Q Consensus 329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~ 355 (444)
+.++++++.|+..+.|++.
T Consensus 327 --------g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 327 --------GNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp --------SSCEEEEECCCSTTCGGGC
T ss_pred --------CCeEEEEeccccccccccc
Confidence 6789999988876666654
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-36 Score=278.06 Aligned_cols=247 Identities=11% Similarity=0.112 Sum_probs=208.6
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC--CccccceeeccccccEEEEE--eC--CCeEEEEecCCcEEEEE
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF--KNFNTNTDVSFGEGDIVGVS--RY--DECILTAVKSGDVKLWR 113 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~--~~~~~~~~~~~~~~~v~~~s--~~--~~~l~~~~~dg~i~iw~ 113 (444)
+|...|++++|+ |++.+|++|+.||.|+||++.. ++....+ .+|...|.++. ++ +++|++++.||.|++|+
T Consensus 9 ~h~~~v~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 9 AHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp ECCCCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred CCcccEEEEEEc-CCCCEEEEEECCCcEEEEecCCCcceeeeEe--cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 899999999999 7999999999999999999984 4444444 47788887775 44 89999999999999999
Q ss_pred cCCCC--ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCce--eeeeeecccceeeEeeeCCCcccccCc
Q psy8152 114 YKTEP--DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRRP 187 (444)
Q Consensus 114 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (444)
+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++.+. ....+..+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~----------------- 148 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI----------------- 148 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT-----------------
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC-----------------
Confidence 99886 55566779999999999998 9999999999999999999863 3334445554
Q ss_pred cceeEEEEec-------------CCCEEEEEeCCceEEEEEcCCCCC--ccceEEEeCCCCCeeEEEEccC---CCEEEE
Q psy8152 188 VWVNGISFLP-------------NSDKVAVCSKQGYVRVYDPKITTQ--RRPVLKVDIPDVALSCITTTNQ---SHYVIV 249 (444)
Q Consensus 188 ~~i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~i~~~~~~~~---~~~l~~ 249 (444)
.|++++|+| ++.+|++++.|+.|++||++ ... ...+..+..|...|.+++|+|+ +++|++
T Consensus 149 -~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 149 -GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN-SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp -CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE-TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred -ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec-CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE
Confidence 799999999 68999999999999999998 212 2355677889999999999999 899999
Q ss_pred EcCCCcEEEEEcCCCCc-----ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152 250 GSTTGDMMAVDLRGKGK-----PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL 309 (444)
Q Consensus 250 ~~~dg~i~iwd~~~~~~-----~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~ 309 (444)
++.||.|++||++. +. .+.....|...|++++|+|++++|++++.||.|++|++.....
T Consensus 227 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~ 290 (379)
T 3jrp_A 227 VSQDRTCIIWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 290 (379)
T ss_dssp EETTSCEEEEEESS-TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTE
T ss_pred EeCCCEEEEEeCCC-CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCc
Confidence 99999999999998 53 2222234888999999999999999999999999999986443
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=8.5e-36 Score=279.16 Aligned_cols=285 Identities=11% Similarity=0.076 Sum_probs=229.5
Q ss_pred cceEEEeeeccCCc-EEEEEEcCCeEEEEeCCCC-ccccc-eeeccccccEEEE--Ee-CCCeEEEEecCCcEEEEEcCC
Q psy8152 43 ASVLALNWGNVEES-ELLIAYSGQKIKIYDTDFK-NFNTN-TDVSFGEGDIVGV--SR-YDECILTAVKSGDVKLWRYKT 116 (444)
Q Consensus 43 ~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~-~~~~~-~~~~~~~~~v~~~--s~-~~~~l~~~~~dg~i~iw~~~~ 116 (444)
.....++++ |+.. ++++++.+|.|+||++... +.... ....+|...|.++ +| ++++|++|+.||.|++|++.+
T Consensus 35 ~~~~~~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 35 WDSGFCAVN-PKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp CSSCSEEEC-SSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred cCCCcEEEC-CCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 344567888 4444 3445788999999998653 22121 1234788888776 56 789999999999999999998
Q ss_pred C-------CccccccccCCCeEEEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeee--ecccceeeEeeeCCCcccccC
Q psy8152 117 E-------PDQWTNFNVGPQLECMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSA--KNVSHRVLVYSVKPDEFDLRR 186 (444)
Q Consensus 117 ~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 186 (444)
+ +.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++.+..+ ..|..
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------------- 177 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD---------------- 177 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS----------------
T ss_pred CCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC----------------
Confidence 7 4555677899999999999987 79999999999999999999988888 56666
Q ss_pred ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE-eCCCCC-eeEEEEccCCCEEEEE---cCCCcEEEEEc
Q psy8152 187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-DIPDVA-LSCITTTNQSHYVIVG---STTGDMMAVDL 261 (444)
Q Consensus 187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~---~~dg~i~iwd~ 261 (444)
.|++++|+|++++|++++.|+.|++||++ ....+..+ ..|... +.+++|+|++++|++| +.++.|++||+
T Consensus 178 --~v~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 178 --TIYSVDWSRDGALICTSCRDKRVRVIEPR---KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp --CEEEEEECTTSSCEEEEETTSEEEEEETT---TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred --ceEEEEECCCCCEEEEEecCCcEEEEeCC---CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 79999999999999999999999999999 77788887 677765 8999999999999999 89999999999
Q ss_pred CCCCcc-eeEec-cccCceeEEEecCCCCEEEE-EECCCcEEEEEcCCCce-EEE---eecCCceeEEEEcCCCcccccc
Q psy8152 262 RGKGKP-CYKYK-GFAGCVKDIACPLNENLILS-VSLDRHFRVHDFHSKKL-LRK---DYMQSRLTSILVRSDFSLENET 334 (444)
Q Consensus 262 ~~~~~~-~~~~~-~h~~~i~~~~~s~~~~~l~s-~~~dg~i~vw~~~~~~~-~~~---~~~~~~i~~~~~~~~~~~~~~~ 334 (444)
++ ... +.... .|...|.+++|+|++++|++ ++.||.|++|++.+++. +.. ..+..++.+++|+++
T Consensus 253 ~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~------- 324 (402)
T 2aq5_A 253 KH-LEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPK------- 324 (402)
T ss_dssp TB-CSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCG-------
T ss_pred cc-ccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecc-------
Confidence 98 554 44443 57788999999999998875 45799999999999873 333 335688999999854
Q ss_pred hhhhhccccccCCCccccCCCcccccc
Q psy8152 335 KKEEQEHSEEKGDSDEKYDPEHFEMNQ 361 (444)
Q Consensus 335 ~~~~~~~s~~~d~~i~~W~~~~~~~~~ 361 (444)
+.++++ .++.+++|++..+....
T Consensus 325 --~~~~~s--~~~~~~~~~l~~~~~~~ 347 (402)
T 2aq5_A 325 --RGLEVN--KCEIARFYKLHERKCEP 347 (402)
T ss_dssp --GGSCGG--GTEEEEEEEEETTEEEE
T ss_pred --ccccee--cceeEEEEEcCCCcEEE
Confidence 456665 45689999998765443
No 100
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.9e-37 Score=277.70 Aligned_cols=244 Identities=11% Similarity=0.051 Sum_probs=199.6
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCC--ccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcC
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEP--DQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLN 157 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~ 157 (444)
.+|...|.++ +|++++|++|+.|++|+|||+.++. .+..+.+|..+|.+++|+| ++++|++|+.|++|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 4778888765 6889999999999999999998774 3445778999999999975 58999999999999999999
Q ss_pred Cce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152 158 TTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV 233 (444)
Q Consensus 158 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 233 (444)
+++ .+..+.+|.. .|++++|+|+ +.+|++|+.|++|++|+++..........+.+|..
T Consensus 90 ~~~~~~~~~~~~h~~------------------~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 90 NGTWEKSHEHAGHDS------------------SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp SSCCCEEEEECCCSS------------------CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred CCcceEEEEccCCCC------------------ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 863 5556666666 7999999998 78999999999999999981111122344567888
Q ss_pred CeeEEEEccC-----------------CCEEEEEcCCCcEEEEEcCCCC---cceeEeccccCceeEEEecCCC----CE
Q psy8152 234 ALSCITTTNQ-----------------SHYVIVGSTTGDMMAVDLRGKG---KPCYKYKGFAGCVKDIACPLNE----NL 289 (444)
Q Consensus 234 ~i~~~~~~~~-----------------~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~h~~~i~~~~~s~~~----~~ 289 (444)
.|.+++|+|+ +++|++|+.|+.|++||++. . +++..+.+|...|++++|+|++ .+
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~-~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE-DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT-TSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC-CCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 9999999997 46899999999999999976 4 4677888999999999999986 79
Q ss_pred EEEEECCCcEEEEEcCCC---ce-EEE-eecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152 290 ILSVSLDRHFRVHDFHSK---KL-LRK-DYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPE 355 (444)
Q Consensus 290 l~s~~~dg~i~vw~~~~~---~~-~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~ 355 (444)
|++++.|++|+||++.+. .. ... ..|...|.+++|+++ +.++++++.|++|+||+..
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~---------g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT---------ANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTT---------TCCEEEEESSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCC---------CCEEEEEcCCCeEEEEEEC
Confidence 999999999999999762 11 111 237888999998854 6789999999999999865
No 101
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.9e-35 Score=268.35 Aligned_cols=264 Identities=14% Similarity=0.174 Sum_probs=222.1
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCc-EEEEEEcCCeEEEEeC-CCCcccccee
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEES-ELLIAYSGQKIKIYDT-DFKNFNTNTD 82 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~-~~~~~~~~~~ 82 (444)
++.+|++|+.+|.|++|++..+... .....+ .+|...|++++|+ |++. +|++|+.||.|++|++ .+++. ..+
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~~--~~~~~~v~~~~~~-~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~- 95 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKN-VDLLQS--LRYKHPLLCCNFI-DNTDLQIYVGTVQGEILKVDLIGSPSF-QAL- 95 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTE-EEEEEE--EECSSCEEEEEEE-ESSSEEEEEEETTSCEEEECSSSSSSE-EEC-
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCcc-ccceee--eecCCceEEEEEC-CCCCcEEEEEcCCCeEEEEEeccCCce-Eec-
Confidence 5678999999999999999877621 111222 2799999999999 7899 9999999999999999 87765 333
Q ss_pred ecc--ccccEEEE--EeCCCeEEEEecCCcEEEEEcCC---------CCccccccccCCCeEEEEEeccCCEEEEeeCCC
Q psy8152 83 VSF--GEGDIVGV--SRYDECILTAVKSGDVKLWRYKT---------EPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN 149 (444)
Q Consensus 83 ~~~--~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 149 (444)
.. |...|.++ +| +++|++++.|+.|++|++.+ ++++. ...|...|.+++|+|++ |++++.++
T Consensus 96 -~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~--l~~~~~d~ 170 (342)
T 1yfq_A 96 -TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN-NTKVKNKIFTMDTNSSR--LIVGMNNS 170 (342)
T ss_dssp -BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS-SSSSCCCEEEEEECSSE--EEEEESTT
T ss_pred -cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeee-EEeeCCceEEEEecCCc--EEEEeCCC
Confidence 35 77777665 56 89999999999999999987 77665 34499999999999876 99999999
Q ss_pred eEEEEEcCC-ceee--eeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCc---
Q psy8152 150 DLKLWDLNT-TKNI--FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQR--- 222 (444)
Q Consensus 150 ~i~vwd~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~--- 222 (444)
.|++||+++ +... .....+.. .|.+++|+| ++++|++++.+|.|++|++. ..
T Consensus 171 ~i~i~d~~~~~~~~~~~~~~~~~~------------------~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~---~~~~~ 229 (342)
T 1yfq_A 171 QVQWFRLPLCEDDNGTIEESGLKY------------------QIRDVALLPKEQEGYACSSIDGRVAVEFFD---DQGDD 229 (342)
T ss_dssp EEEEEESSCCTTCCCEEEECSCSS------------------CEEEEEECSGGGCEEEEEETTSEEEEEECC---TTCCS
T ss_pred eEEEEECCccccccceeeecCCCC------------------ceeEEEECCCCCCEEEEEecCCcEEEEEEc---CCCcc
Confidence 999999998 5432 22222333 699999999 99999999999999999998 33
Q ss_pred ---cceEEEeCCCC---------CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCE
Q psy8152 223 ---RPVLKVDIPDV---------ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENL 289 (444)
Q Consensus 223 ---~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~ 289 (444)
.....+..|.. .|.+++|+|++++|++++.||.|++||+.+ ++++..+.+| ..+|++++ |++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~h~~~v~~~~--~~~~~ 306 (342)
T 1yfq_A 230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT-RKKIKNFAKFNEDSVVKIA--CSDNI 306 (342)
T ss_dssp TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSSEEEEEE--ECSSE
T ss_pred cccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc-HhHhhhhhcccCCCceEec--CCCCe
Confidence 77778888765 899999999999999999999999999999 9999999998 99999999 99999
Q ss_pred EEEEECCCc-EEEEE
Q psy8152 290 ILSVSLDRH-FRVHD 303 (444)
Q Consensus 290 l~s~~~dg~-i~vw~ 303 (444)
|++++.||. .+.|.
T Consensus 307 l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 307 LCLATSDDTFKTNAA 321 (342)
T ss_dssp EEEEEECTHHHHCSS
T ss_pred EEEEecCCccccccc
Confidence 999999998 55555
No 102
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-36 Score=289.96 Aligned_cols=244 Identities=13% Similarity=0.143 Sum_probs=197.7
Q ss_pred CcccceEEEeeeccCC---------cEEEEE-------------------EcCCeEEEEeCCCCccccc--eeecccccc
Q psy8152 40 TNKASVLALNWGNVEE---------SELLIA-------------------YSGQKIKIYDTDFKNFNTN--TDVSFGEGD 89 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~---------~~l~~~-------------------~~d~~i~vw~~~~~~~~~~--~~~~~~~~~ 89 (444)
.+.+.|.+|+|+ |++ ++||+| +.|++|+||++.+++.... .....|...
T Consensus 131 ~~~~~V~sv~w~-p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~ 209 (524)
T 2j04_B 131 NVGGLVTDIAWL-NIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGE 209 (524)
T ss_dssp ECCC--CCCSCE-EECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCS
T ss_pred ECCCceeEEEec-ccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCc
Confidence 457899999999 454 667664 4678999999987765321 122345666
Q ss_pred EEEE--EeC------CCeEEEEecCCcEEEEEcCCCCcc-----------ccccccCCCeEEEEEeccCCEEEEeeCCCe
Q psy8152 90 IVGV--SRY------DECILTAVKSGDVKLWRYKTEPDQ-----------WTNFNVGPQLECMKHNKHSNIIATGGKEND 150 (444)
Q Consensus 90 v~~~--s~~------~~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 150 (444)
|.++ +|+ +.+||+++.||+|++|++..+... ..+.+|...|++++|+++ ..|++|+.||+
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~Dgt 288 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGF 288 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSE
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCE
Confidence 7655 554 469999999999999999876432 135678999999999985 48999999999
Q ss_pred EEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEE--EEecCC-CEEEEEeCCceEEEEEcCCCCCccceE
Q psy8152 151 LKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI--SFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVL 226 (444)
Q Consensus 151 i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~ 226 (444)
|++||++++. +...+..|.. .|++| +|+|++ ++||+|+.|++|+|||++ ..+++.
T Consensus 289 V~lWD~~~~~~~~~~~~~H~~------------------~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~---~~~~~~ 347 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQVHDS------------------YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK---DIATTK 347 (524)
T ss_dssp EEEEETTBCSSCSEEEECSSS------------------CEEEEEEECCTTSCCEEEEEETTSEEEEECGG---GHHHHC
T ss_pred EEEEECCCCCCceEEeecccc------------------cEEEEEEEcCCCCCeEEEEeccCCeEEEEECC---CCCccc
Confidence 9999999763 4455677776 79999 578887 899999999999999999 666666
Q ss_pred EEeCCCC--CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 227 KVDIPDV--ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 227 ~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
.+.+|.. .|.+++|+|+++.|++++.|++|++||+++ +.++.++.+|.+.|++|+|+|++++|++|+.||+|++|++
T Consensus 348 ~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 348 TTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp EEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred ccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 6665543 588999999999999999999999999999 8888999999999999999999999999999999999998
Q ss_pred CCC
Q psy8152 305 HSK 307 (444)
Q Consensus 305 ~~~ 307 (444)
..+
T Consensus 427 ~~~ 429 (524)
T 2j04_B 427 ARR 429 (524)
T ss_dssp CSS
T ss_pred hHh
Confidence 654
No 103
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.3e-35 Score=275.47 Aligned_cols=251 Identities=16% Similarity=0.182 Sum_probs=210.0
Q ss_pred eeecccCcccceEEEeeeccC-CcEEEEEEcCCeEEEEeCCC----------CccccceeeccccccEEE--EEeCCC-e
Q psy8152 34 QNVKYITNKASVLALNWGNVE-ESELLIAYSGQKIKIYDTDF----------KNFNTNTDVSFGEGDIVG--VSRYDE-C 99 (444)
Q Consensus 34 ~~~~~~~h~~~v~~~~~~~~~-~~~l~~~~~d~~i~vw~~~~----------~~~~~~~~~~~~~~~v~~--~s~~~~-~ 99 (444)
.......|.+.|++++|+ |+ +.+|++++.+|.|++|++.+ ......+ .+|...+.+ ++|++. +
T Consensus 120 ~~~~~~~h~~~v~~l~~~-p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 120 EIEIKINHEGEVNRARYM-PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL--RGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEEEEEESSCCSEEEEE-TTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE--ECCSSCCCCEEECTTSTTE
T ss_pred EEEEEEcCCCcEEEEEEC-CCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe--cCCCCCeEEEEeCCCCCCe
Confidence 334444899999999999 55 78999999999999999976 3444444 466666655 467777 9
Q ss_pred EEEEecCCcEEEEEcCCCCc-------cccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCc---eeeeeeecc
Q psy8152 100 ILTAVKSGDVKLWRYKTEPD-------QWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTT---KNIFSAKNV 168 (444)
Q Consensus 100 l~~~~~dg~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~ 168 (444)
|++|+.+|.|++|++..+.. ...+..|...|.+++|+| ++.+|++++.++.|++||++++ +++..+..|
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 99999999999999987432 224557999999999999 7889999999999999999986 466666666
Q ss_pred cceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC-E
Q psy8152 169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH-Y 246 (444)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 246 (444)
.. .|++++|+|++. +|++|+.||.|++||++ ....++..+..|...|++++|+|+++ +
T Consensus 277 ~~------------------~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~--~~~~~~~~~~~h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 277 TA------------------EVNCLSFNPYSEFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETI 336 (430)
T ss_dssp SS------------------CEEEEEECSSCTTEEEEEETTSEEEEEETT--CTTSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred CC------------------CeEEEEeCCCCCCEEEEEeCCCeEEEEeCC--CCCCCeEEeecCCCCEEEEEECCCCCCE
Confidence 65 799999999985 78999999999999999 22567888899999999999999984 6
Q ss_pred EEEEcCCCcEEEEEcCCCC-------------cceeEeccccCceeEEEecCCCC-EEEEEECCCcEEEEEcCCC
Q psy8152 247 VIVGSTTGDMMAVDLRGKG-------------KPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHFRVHDFHSK 307 (444)
Q Consensus 247 l~~~~~dg~i~iwd~~~~~-------------~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~ 307 (444)
|++++.||.|+|||+...+ .++..+.+|...|++++|+|+++ +|++++.||.|+||++...
T Consensus 337 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 8999999999999998611 56677778999999999999998 9999999999999999764
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=278.97 Aligned_cols=285 Identities=12% Similarity=0.123 Sum_probs=214.0
Q ss_pred CCcccEEEecCCCcEEEEEcCCCcc-------ceeeeeeecccCcc------------cceEEEeeeccCC--cEEEEEE
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKC-------IIKNIQNVKYITNK------------ASVLALNWGNVEE--SELLIAY 62 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~-------~~~~~~~~~~~~h~------------~~v~~~~~~~~~~--~~l~~~~ 62 (444)
+++.+|++|+.||.|++|++.+++. .......+. +|. ..|++++|+ |++ .+|++++
T Consensus 38 ~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~--~h~~~~~~~~~~~~~~~V~~l~~~-~~~~~~~l~s~s 114 (447)
T 3dw8_B 38 HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ--SHEPEFDYLKSLEIEEKINKIRWL-PQKNAAQFLLST 114 (447)
T ss_dssp SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE--CCCCEEEGGGTEEECCCCCEEEEC-CCCSSSEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc--cccccccccccccccCceEEEEEc-CCCCcceEEEeC
Confidence 4678999999999999999987652 011122222 787 889999999 676 7999999
Q ss_pred cCCeEEEEeCCCCccccc--------------------------------------eeeccccccEEE--EEeCCCeEEE
Q psy8152 63 SGQKIKIYDTDFKNFNTN--------------------------------------TDVSFGEGDIVG--VSRYDECILT 102 (444)
Q Consensus 63 ~d~~i~vw~~~~~~~~~~--------------------------------------~~~~~~~~~v~~--~s~~~~~l~~ 102 (444)
.|+.|++|++.++..... ....+|...|.+ ++|++++|++
T Consensus 115 ~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 194 (447)
T 3dw8_B 115 NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLS 194 (447)
T ss_dssp CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEE
T ss_pred CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEE
Confidence 999999999876443110 112356666655 4688999999
Q ss_pred EecCCcEEEEEcCC-CCccc-------cccccCCCeEEEEEeccC-CEEEEeeCCCeEEEEEcCCcee----eeeeeccc
Q psy8152 103 AVKSGDVKLWRYKT-EPDQW-------TNFNVGPQLECMKHNKHS-NIIATGGKENDLKLWDLNTTKN----IFSAKNVS 169 (444)
Q Consensus 103 ~~~dg~i~iw~~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~ 169 (444)
| .|+.|++||+.+ ++... .+..|...|++++|+|++ ++|++|+.||.|++||+++++. +..+..+.
T Consensus 195 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 273 (447)
T 3dw8_B 195 A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPE 273 (447)
T ss_dssp E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-
T ss_pred e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCC
Confidence 8 899999999984 33332 255799999999999988 9999999999999999998775 55555543
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCC-ccceEEEeCCCCC--------------
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQ-RRPVLKVDIPDVA-------------- 234 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~-------------- 234 (444)
.... ......+...|++++|+|++++|++++. +.|++||++ . ..++..+..|...
T Consensus 274 ~~~~------~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 274 DPSN------RSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN---MENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp ----------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT---CCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred Cccc------cccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC---CCccccceeeccccccccccccccccccc
Confidence 2000 0000001125999999999999999999 999999998 4 6777778877532
Q ss_pred -eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec---------------------------------cccCceeE
Q psy8152 235 -LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK---------------------------------GFAGCVKD 280 (444)
Q Consensus 235 -i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------------------------------~h~~~i~~ 280 (444)
+..++|+|++++|++|+.||.|++||+.+ ++.+. +. .+...|..
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 421 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNT-KRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH 421 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTT-CCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCC-Cccee-eeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence 23499999999999999999999999998 66542 22 23457889
Q ss_pred EEecCCCCEEEEEECCCcEEEEEcC
Q psy8152 281 IACPLNENLILSVSLDRHFRVHDFH 305 (444)
Q Consensus 281 ~~~s~~~~~l~s~~~dg~i~vw~~~ 305 (444)
++|+|++++||+++.++ +++|..+
T Consensus 422 ~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 422 TAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EEECSSSSEEEEECSSC-EEEEECC
T ss_pred EEECCCCCEEEEEecce-eeeeccc
Confidence 99999999999988776 7788643
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-34 Score=273.47 Aligned_cols=280 Identities=11% Similarity=0.030 Sum_probs=225.7
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---cccceeec----------------------------------
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---FNTNTDVS---------------------------------- 84 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~---------------------------------- 84 (444)
..++.+++|+ +++++|+++ .++.|++|++.+++ .+..+..+
T Consensus 4 ~~p~~~v~~s-~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTS-RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEEC-SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEec-CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 4678999999 788866655 57899999999888 44443311
Q ss_pred ------------------cccccEEEE--EeCCCeE-EEEecCCcEEEEEcC--CCCcccccc--ccCCCeEEEEEeccC
Q psy8152 85 ------------------FGEGDIVGV--SRYDECI-LTAVKSGDVKLWRYK--TEPDQWTNF--NVGPQLECMKHNKHS 139 (444)
Q Consensus 85 ------------------~~~~~v~~~--s~~~~~l-~~~~~dg~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~ 139 (444)
.|...|.++ +|++++| ++++.||.|++|++. +++.+..+. .|...|.+++|+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence 122246554 7889986 889999999999999 787776554 567899999999999
Q ss_pred CEEEEeeCCCeEEEEEcCCceeee----eeecccceeeEeeeCCCcccccCccceeEEEEecC---CCEEEEEeCCceEE
Q psy8152 140 NIIATGGKENDLKLWDLNTTKNIF----SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN---SDKVAVCSKQGYVR 212 (444)
Q Consensus 140 ~~l~~~~~d~~i~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~ 212 (444)
++|++|+.+|.|++|++.+++... .+.+|.. .|++++|+|+ +++|++++.|+.|+
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~------------------~v~~~~~sp~~~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVS------------------MLTDVHLIKDSDGHQFIITSDRDEHIK 223 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSS------------------CEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccC------------------ceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence 999999999999999998866443 5555655 7999999999 89999999999999
Q ss_pred EEEcCCCCCccceEE-EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-----------------
Q psy8152 213 VYDPKITTQRRPVLK-VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF----------------- 274 (444)
Q Consensus 213 i~d~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h----------------- 274 (444)
+||++ ....+.. +.+|...|.+++|+ ++++|++++.|+.|++||+++ ++++..+..+
T Consensus 224 vwd~~---~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 224 ISHYP---QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRF 298 (450)
T ss_dssp EEEES---CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----
T ss_pred EEECC---CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccc
Confidence 99999 6667766 45899999999999 999999999999999999999 8888887632
Q ss_pred --------cCceeEEEecCCCCEEEEEE-CCCcEEEEEc--CCC---ceEEEeecCCceeEEEEcCCCcccccchhhhhc
Q psy8152 275 --------AGCVKDIACPLNENLILSVS-LDRHFRVHDF--HSK---KLLRKDYMQSRLTSILVRSDFSLENETKKEEQE 340 (444)
Q Consensus 275 --------~~~i~~~~~s~~~~~l~s~~-~dg~i~vw~~--~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 340 (444)
...|.+++|+|++++|++++ .++.|+||++ ..+ +++..+.....+.+++|.++ +.++
T Consensus 299 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~---------~~~v 369 (450)
T 2vdu_B 299 QNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHND---------EFQV 369 (450)
T ss_dssp ------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETT---------EEEE
T ss_pred cccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCC---------cEEE
Confidence 35689999999999999999 8999999999 555 55666665588999999864 2233
Q ss_pred ccccc------CCCccccCCC
Q psy8152 341 HSEEK------GDSDEKYDPE 355 (444)
Q Consensus 341 ~s~~~------d~~i~~W~~~ 355 (444)
+.++. ++.|++|.+.
T Consensus 370 ~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 370 TLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EECCTTCCSSCCCSEEEEEEE
T ss_pred EEecccCCCCCCcceEEEEEE
Confidence 33332 5567888765
No 106
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-35 Score=271.09 Aligned_cols=250 Identities=13% Similarity=0.101 Sum_probs=210.4
Q ss_pred cccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC--CCCccccccccCCCeEEEEEecc--CCEEEEeeCCCe
Q psy8152 77 FNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK--TEPDQWTNFNVGPQLECMKHNKH--SNIIATGGKEND 150 (444)
Q Consensus 77 ~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 150 (444)
++..+. +|...|.++ +|++++|++++.||.|++|++. +++.+..+..|...|++++|+|+ +++|++++.||.
T Consensus 3 ~~~~~~--~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 3 MVVIAN--AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp --CCEE--ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccEEec--CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 344454 677777665 6889999999999999999998 45555567789999999999876 999999999999
Q ss_pred EEEEEcCCce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceE
Q psy8152 151 LKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVL 226 (444)
Q Consensus 151 i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 226 (444)
|++||+.+++ .+..+..+.. .|++++|+|+ +.+|++++.|+.|++||++ ........
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~ 141 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSA------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFK-ENGTTSPI 141 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSS------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECC-TTSCCCEE
T ss_pred EEEEEcCCCceeEeeeecCCCc------------------ceEEEEeCCCCCCCEEEEecCCCcEEEEecC-CCCceeeE
Confidence 9999999986 6666666665 7999999999 8999999999999999999 33345566
Q ss_pred EEeCCCCCeeEEEEcc-------------CCCEEEEEcCCCcEEEEEcCCCCc----ceeEeccccCceeEEEecCC---
Q psy8152 227 KVDIPDVALSCITTTN-------------QSHYVIVGSTTGDMMAVDLRGKGK----PCYKYKGFAGCVKDIACPLN--- 286 (444)
Q Consensus 227 ~~~~~~~~i~~~~~~~-------------~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~h~~~i~~~~~s~~--- 286 (444)
.+..|...|.+++|+| ++.+|++++.||.|++||++. +. ++..+.+|...|++++|+|+
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS-DAQTYVLESTLEGHSDWVRDVAWSPTVLL 220 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEET-TTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecC-CCcceeeEEEEecccCcEeEEEECCCCCC
Confidence 7788999999999999 699999999999999999987 54 44677789999999999999
Q ss_pred CCEEEEEECCCcEEEEEcCCCc---eEEEe---ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcc
Q psy8152 287 ENLILSVSLDRHFRVHDFHSKK---LLRKD---YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHF 357 (444)
Q Consensus 287 ~~~l~s~~~dg~i~vw~~~~~~---~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~ 357 (444)
+++|++++.||.|++|++.++. ..... .+...|.+++|+++ +.++++++.|+.|++|++...
T Consensus 221 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 221 RSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS---------SCCEEEEESSSSEEEEEEEET
T ss_pred CCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCC---------CCEEEEecCCCcEEEEeCCCC
Confidence 8999999999999999999864 11111 27778999998854 578999999999999998843
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.1e-35 Score=267.80 Aligned_cols=275 Identities=11% Similarity=0.098 Sum_probs=214.5
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeE-EEEecCCcEEEEEcCCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEP 118 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~ 118 (444)
.|...|++++|+ |++.+|++|+.+ .++||++.+++...... .+...+.++.+.++.+ ++++.+++|++||+.+++
T Consensus 17 ~h~~~V~~v~fs-~dg~~la~g~~~-~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 17 HVSNPVTDYEFN-QDQSCLILSTLK-SFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp --CCCCCEEEEC-TTSSEEEEECSS-EEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred cCCCceEEEEEC-CCCCEEEEEcCC-EEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 799999999999 799999998876 57899998776655433 2345667777887776 567778999999999998
Q ss_pred ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152 119 DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP 197 (444)
Q Consensus 119 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 197 (444)
++. ...+...|.+++|+++. ++++ .++.|++||+.++ +.+..+.. . ...+++++
T Consensus 93 ~~~-~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~-------------------~~~~~~s~ 147 (355)
T 3vu4_A 93 DVS-RIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--F-------------------GGVCEFSN 147 (355)
T ss_dssp EEE-EEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--E-------------------EEEEEEET
T ss_pred EEE-EEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--C-------------------CceEEEEc
Confidence 886 44577899999998753 4444 3789999999987 66655543 1 33455666
Q ss_pred CCCEEEE--EeCCceEEEEEcCCCCCcc---------------c-eEEEeCCCCCeeEEEEccCCCEEEEEcCCCc-EEE
Q psy8152 198 NSDKVAV--CSKQGYVRVYDPKITTQRR---------------P-VLKVDIPDVALSCITTTNQSHYVIVGSTTGD-MMA 258 (444)
Q Consensus 198 ~~~~l~~--~~~d~~i~i~d~~~~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i 258 (444)
.++++ |+.+|.|++||+. ... + +..+.+|...|++++|+|++++|++|+.|++ |+|
T Consensus 148 --~~la~~sg~~~g~v~iwd~~---~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 148 --GLLVYSNEFNLGQIHITKLQ---SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRV 222 (355)
T ss_dssp --TEEEEEESSCTTCEEEEECC---C------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred --cEEEEeCCCcCcEEEEEECC---CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence 56665 6899999999998 322 2 7788999999999999999999999999998 999
Q ss_pred EEcCCCCcceeEec-c-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec---------------------
Q psy8152 259 VDLRGKGKPCYKYK-G-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM--------------------- 315 (444)
Q Consensus 259 wd~~~~~~~~~~~~-~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~--------------------- 315 (444)
||+++ ++++.++. + |...|++++|+|++++|++++.|++|++|++..+........
T Consensus 223 wd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
T 3vu4_A 223 FKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLS 301 (355)
T ss_dssp EETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECC
T ss_pred EECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEec
Confidence 99999 99999998 5 999999999999999999999999999999976532111110
Q ss_pred ---CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152 316 ---QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 316 ---~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~ 358 (444)
..+...++|+ +++..+++++.||.+++|++....
T Consensus 302 ~~~~~~~~~~a~~---------~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 302 VDKHVRGCKIAWI---------SESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CCTTCCCCEEEES---------SSSEEEEEETTTTEEEEEEEEEET
T ss_pred cCCCCCceEEEEe---------CCCCEEEEEeCCCeEEEEEEEcCC
Confidence 1112445555 446789999999999999877543
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.1e-33 Score=259.95 Aligned_cols=318 Identities=13% Similarity=0.081 Sum_probs=243.1
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEE-EEEEcCCeEEEEeCCCCccccceeec
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESEL-LIAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
+..+++++.++.|++|++.+++. +..+ .+...+.+++|+ |++.+| ++++.++.|++||+.+++.+..+..+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~----~~~~---~~~~~~~~~~~s-~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKV----TATI---PVGSNPMGAVIS-PDGTKVYVANAHSNDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEE----EEEE---ECSSSEEEEEEC-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred CEEEEEcCCCCEEEEEECCCCeE----EEEe---ecCCCcceEEEC-CCCCEEEEECCCCCeEEEEECCCCeEEEEEECC
Confidence 45788999999999999988764 1222 234568999999 788876 56778999999999999988877532
Q ss_pred cccccEEEEEeCCCeEEEE-ecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEE-EEeeCCCeEEEEEcCCceee
Q psy8152 85 FGEGDIVGVSRYDECILTA-VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII-ATGGKENDLKLWDLNTTKNI 162 (444)
Q Consensus 85 ~~~~~v~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vwd~~~~~~~ 162 (444)
. .....+++|++++|+++ +.++.|++||+.+++.+. ...+...+.+++|+|+++.| ++++.++.|++||+.+++.+
T Consensus 74 ~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 74 S-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG-TVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred C-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE-EEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 2 33345567889987554 467999999999988875 44456678999999999877 68888999999999999888
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE-EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV-AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 241 (444)
..+..+.. +.+++|+|++++| ++++.++.|++||++ ....+..+. +...+.+++|+
T Consensus 152 ~~~~~~~~-------------------~~~~~~~~dg~~l~~~~~~~~~v~~~d~~---~~~~~~~~~-~~~~~~~~~~~ 208 (391)
T 1l0q_A 152 NTVSVGRS-------------------PKGIAVTPDGTKVYVANFDSMSISVIDTV---TNSVIDTVK-VEAAPSGIAVN 208 (391)
T ss_dssp EEEECCSS-------------------EEEEEECTTSSEEEEEETTTTEEEEEETT---TTEEEEEEE-CSSEEEEEEEC
T ss_pred EEEecCCC-------------------cceEEECCCCCEEEEEeCCCCEEEEEECC---CCeEEEEEe-cCCCccceEEC
Confidence 87766554 7999999999877 677889999999999 666666655 45578999999
Q ss_pred cCCCEEEEEc---CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEE-EEEECCCcEEEEEcCCCceEEEeecC-
Q psy8152 242 NQSHYVIVGS---TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLI-LSVSLDRHFRVHDFHSKKLLRKDYMQ- 316 (444)
Q Consensus 242 ~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l-~s~~~dg~i~vw~~~~~~~~~~~~~~- 316 (444)
|++++|++++ .++.|++||+.+ ++++..+..|. .+.+++|+|++++| ++++.++.|++||+.+++++..+...
T Consensus 209 ~~g~~l~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 209 PEGTKAYVTNVDKYFNTVSMIDTGT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGK 286 (391)
T ss_dssp TTSSEEEEEEECSSCCEEEEEETTT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred CCCCEEEEEecCcCCCcEEEEECCC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCc
Confidence 9999999887 689999999999 88888888765 57899999999877 66688999999999999988877522
Q ss_pred Ccee---EEEEcC--------CCcccc---cchhh--hhccccccCCCccccCCCccc
Q psy8152 317 SRLT---SILVRS--------DFSLEN---ETKKE--EQEHSEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 317 ~~i~---~~~~~~--------~~~~~~---~~~~~--~~~~s~~~d~~i~~W~~~~~~ 358 (444)
.+.. .+.+.+ .|+... ..+.. ..+.+.+.+...++|++..+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 287 NPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS 344 (391)
T ss_dssp SEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC
T ss_pred CCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCc
Confidence 2211 122221 111000 00111 345566778889999987654
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=265.51 Aligned_cols=272 Identities=12% Similarity=0.122 Sum_probs=217.6
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF 85 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~ 85 (444)
+.+|++|+.+|.|++|++.+..... ...+. +|...|++++|+ |++.+|++++.||.|++|++.+++..... .
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~--~h~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~ 125 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTI--PKAQQ--MHTGPVLDVCWS-DDGSKVFTASCDKTAKMWDLSSNQAIQIA---Q 125 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEE--EEEEE--ECSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEE---E
T ss_pred ceEEEEECCCCcEEEEEcCCCCcee--EEEec--cccCCEEEEEEC-cCCCEEEEEcCCCcEEEEEcCCCCceeec---c
Confidence 5899999999999999998733211 11222 799999999999 79999999999999999999988876643 5
Q ss_pred ccccEEEE----EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 86 GEGDIVGV----SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 86 ~~~~v~~~----s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
|...|.++ ++++.+|++++.|+.|++||+.+++.+..+.. ...+.++.+. ...+++++.++.+++|++.....
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 202 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL-PERCYCADVI--YPMAVVATAERGLIVYQLENQPS 202 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC-SSCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCE
T ss_pred ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec-CCCceEEEec--CCeeEEEeCCCcEEEEEeccccc
Confidence 67777665 45778899999999999999999988864444 4466666665 45888899999999999987554
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE----EEEEeCCceEEEEEcCCCCCc-cceEEEeCCCC---
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK----VAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDV--- 233 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~--- 233 (444)
......... ...+.++++.+.... +++++.|+.|++|+++ .... ..+..+..|..
T Consensus 203 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~~~~~~ 265 (368)
T 3mmy_A 203 EFRRIESPL----------------KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN-PPNPAKDNFTFKCHRSNGT 265 (368)
T ss_dssp EEEECCCSC----------------SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS-CSCHHHHSEEEECSEEC--
T ss_pred hhhhccccc----------------cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC-CCCccccceeeeeeecccc
Confidence 333221111 124666666665543 9999999999999999 2222 66777887765
Q ss_pred ---------CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 234 ---------ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 234 ---------~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
.|++++|+|++++|++++.||.|++||+.+ ++++..+.+|..+|++++|+|++++|++++.|+..+.|++
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA-RTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC-CcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 699999999999999999999999999999 9999999999999999999999999999999986666555
Q ss_pred CC
Q psy8152 305 HS 306 (444)
Q Consensus 305 ~~ 306 (444)
..
T Consensus 345 ~~ 346 (368)
T 3mmy_A 345 YN 346 (368)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-35 Score=266.49 Aligned_cols=265 Identities=9% Similarity=0.029 Sum_probs=198.3
Q ss_pred cCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC---------CCCccc
Q psy8152 53 VEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK---------TEPDQW 121 (444)
Q Consensus 53 ~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~---------~~~~~~ 121 (444)
+++.+|++|+.||.|++||+.+++.+..+. ...|.++ +|. +++++.|++|++|+.. +++.+.
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 467888888888999999988888776664 2233332 343 8888888888888654 444333
Q ss_pred -cccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC
Q psy8152 122 -TNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN 198 (444)
Q Consensus 122 -~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 198 (444)
....|..+|.+++|+| ++++|++++.||.|++||+++++.+.....+.. ..|++++|+|+
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-----------------~~i~~~~~~pd 181 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD-----------------VEYSSGVLHKD 181 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS-----------------CCCCEEEECTT
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC-----------------CceEEEEECCC
Confidence 2335778899999999 999999999999999999999887655433221 25999999999
Q ss_pred CCEEEEEeCCceEEEEEcCCCCCccce-EEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc---
Q psy8152 199 SDKVAVCSKQGYVRVYDPKITTQRRPV-LKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--- 273 (444)
Q Consensus 199 ~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--- 273 (444)
+.+|++|+.||.|++||++ ....+ ..+.. |..+|++++|+|++.+|++++ ++.|++||+++ .+.+..+..
T Consensus 182 g~~lasg~~dg~i~iwd~~---~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~-~~~~~~~~~~~~ 256 (343)
T 3lrv_A 182 SLLLALYSPDGILDVYNLS---SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK-DVGTLAYPTYTI 256 (343)
T ss_dssp SCEEEEECTTSCEEEEESS---CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS-STTCBSSCCCBC
T ss_pred CCEEEEEcCCCEEEEEECC---CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC-CCcceeeccccc
Confidence 9999999999999999999 55655 67777 999999999999999999999 55999999999 777666553
Q ss_pred ccCcee--EEEecCCCCEEEEEEC-CCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152 274 FAGCVK--DIACPLNENLILSVSL-DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE 350 (444)
Q Consensus 274 h~~~i~--~~~~s~~~~~l~s~~~-dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~ 350 (444)
|...+. +++|+|++++|++++. ++.|+||++......... .++..+.|.+.- .+...+++++.|+.+.
T Consensus 257 ~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~------~~~~~l~~~~~d~~~~ 327 (343)
T 3lrv_A 257 PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDT------ADFTDMDVVCGDGGIA 327 (343)
T ss_dssp -----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----------CCCCEEEEEEETTEEE
T ss_pred ccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe---cCceeEecCccc------cccceeEEEecCCceE
Confidence 444444 5999999999999998 999999999765433222 344455544310 1345677788888888
Q ss_pred ccCCC
Q psy8152 351 KYDPE 355 (444)
Q Consensus 351 ~W~~~ 355 (444)
++-..
T Consensus 328 ~~~~~ 332 (343)
T 3lrv_A 328 AILKT 332 (343)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 77433
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.6e-34 Score=270.32 Aligned_cols=247 Identities=15% Similarity=0.187 Sum_probs=204.6
Q ss_pred ccccccEEEE--EeC-CCeEEEEecCCcEEEEEcCC----------CCccccccccCCCeEEEEEeccCC-EEEEeeCCC
Q psy8152 84 SFGEGDIVGV--SRY-DECILTAVKSGDVKLWRYKT----------EPDQWTNFNVGPQLECMKHNKHSN-IIATGGKEN 149 (444)
Q Consensus 84 ~~~~~~v~~~--s~~-~~~l~~~~~dg~i~iw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 149 (444)
..|...|.++ +|+ +.+|++++.+|.|++|++.+ ......+..|...|.+++|+|++. +|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 3566666554 675 67899999999999999986 455556778999999999999877 999999999
Q ss_pred eEEEEEcCCcee-------eeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCC
Q psy8152 150 DLKLWDLNTTKN-------IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQ 221 (444)
Q Consensus 150 ~i~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~ 221 (444)
.|++|++..+.. ...+..|.. .|.+++|+| ++.+|++++.|+.|++||++....
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~------------------~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTA------------------VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSS------------------CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCC------------------CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 999999987322 233334444 799999999 568999999999999999992222
Q ss_pred ccceEEEeCCCCCeeEEEEccCCC-EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCC-EEEEEECCCcE
Q psy8152 222 RRPVLKVDIPDVALSCITTTNQSH-YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNEN-LILSVSLDRHF 299 (444)
Q Consensus 222 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~-~l~s~~~dg~i 299 (444)
..++..+..|...|++++|+|++. +|++|+.||.|++||++....++..+.+|...|++++|+|+++ +|++++.|+.|
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 367788889999999999999887 6889999999999999984577899999999999999999985 79999999999
Q ss_pred EEEEcCC--------------CceEEEee-cCCceeEEEEcCCCcccccchhhh-hccccccCCCccccCCCcc
Q psy8152 300 RVHDFHS--------------KKLLRKDY-MQSRLTSILVRSDFSLENETKKEE-QEHSEEKGDSDEKYDPEHF 357 (444)
Q Consensus 300 ~vw~~~~--------------~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~i~~W~~~~~ 357 (444)
+||++.. .+++.... |...|.+++|+++ +. ++++++.|+.|++|++...
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---------~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN---------EPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSS---------STTEEEEEETTSEEEEEEECHH
T ss_pred EEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCC---------CCCEEEEEECCCCEEEeEcccc
Confidence 9999987 24444443 7788999999865 34 7899999999999998743
No 112
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.7e-34 Score=263.02 Aligned_cols=246 Identities=14% Similarity=0.173 Sum_probs=206.4
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCC----ccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEE
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEP----DQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWD 155 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd 155 (444)
.+|...|.++ +|++++|++++.||.|++|++.++. ....+..|...|.+++|+| ++.+|++++.||.|++||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 4788888776 6789999999999999999998764 3335567999999999999 699999999999999999
Q ss_pred cCCc---------eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccc
Q psy8152 156 LNTT---------KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRP 224 (444)
Q Consensus 156 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~ 224 (444)
+..+ +++..+..+.. .|.+++|+|+ +.+|++++.|+.|++||++ ....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~ 146 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKG------------------SLYSVKFAPAHLGLKLACLGNDGILRLYDAL---EPSD 146 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSS------------------CEEEEEECCGGGCSEEEEEETTCEEEEEECS---STTC
T ss_pred cCCCcccccccCcceeeeecccCC------------------ceeEEEEcCCCCCcEEEEecCCCcEEEecCC---ChHH
Confidence 9886 45666666655 7999999999 9999999999999999998 3332
Q ss_pred eEEE-------------eCCCCCeeEEEEccC---CCEEEEEcCCCcEEEEEcCCCCcc--eeEeccccCceeEEEecCC
Q psy8152 225 VLKV-------------DIPDVALSCITTTNQ---SHYVIVGSTTGDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPLN 286 (444)
Q Consensus 225 ~~~~-------------~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~~ 286 (444)
+..+ ..+...+.+++|+|+ +.+|++++.++.+.+|+... ++. +..+.+|...|++++|+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 147 LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD-GKLHVAAKLPGHKSLIRSISWAPS 225 (351)
T ss_dssp TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTT-SCEEEEEECCCCCSCEEEEEECCC
T ss_pred hccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCC-CceeeeeecCCCCcceeEEEECCC
Confidence 2221 156778999999997 89999999999998888776 654 6778899999999999999
Q ss_pred C----CEEEEEECCCcEEEEEcCCC----------------------------------------------ceEEEee-c
Q psy8152 287 E----NLILSVSLDRHFRVHDFHSK----------------------------------------------KLLRKDY-M 315 (444)
Q Consensus 287 ~----~~l~s~~~dg~i~vw~~~~~----------------------------------------------~~~~~~~-~ 315 (444)
+ ++|++++.||.|++|++..+ +++..+. |
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence 8 89999999999999999874 3444444 7
Q ss_pred CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152 316 QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
...|++++|+++ +.++++++.|+.|++|++..++..
T Consensus 306 ~~~v~~~~~s~~---------~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 306 NGEVWSVSWNLT---------GTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp SSCEEEEEECSS---------SCCEEEEETTSCEEEEEECTTSCE
T ss_pred cccEEEEEEcCC---------CCEEEEecCCCcEEEEecCcCcch
Confidence 889999999854 578999999999999999865443
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=291.45 Aligned_cols=248 Identities=10% Similarity=0.113 Sum_probs=208.8
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE--eC--CCeEEEEecCCcEEEEEcC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS--RY--DECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s--~~--~~~l~~~~~dg~i~iw~~~ 115 (444)
+|.+.|++++|+ |++++|++|+.||.|+||++.++.........+|..+|.++. ++ +++|++|+.||.|++|++.
T Consensus 7 gH~~~V~~l~~s-~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 7 AHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp -CCCCEEEECCC-SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred cCcceeEEEEEC-CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 899999999999 799999999999999999998443333333457888887774 55 8899999999999999999
Q ss_pred CCC--ccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcCCce--eeeeeecccceeeEeeeCCCcccccCccc
Q psy8152 116 TEP--DQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVW 189 (444)
Q Consensus 116 ~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (444)
+++ .+..+..|...|.+++|+|+ +++|++|+.||.|++||++++. ....+..+.. .
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~------------------~ 147 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI------------------G 147 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS------------------C
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC------------------c
Confidence 886 55567779999999999998 9999999999999999998863 3334445554 7
Q ss_pred eeEEEEec-------------CCCEEEEEeCCceEEEEEcCCCC-CccceEEEeCCCCCeeEEEEccC---CCEEEEEcC
Q psy8152 190 VNGISFLP-------------NSDKVAVCSKQGYVRVYDPKITT-QRRPVLKVDIPDVALSCITTTNQ---SHYVIVGST 252 (444)
Q Consensus 190 i~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~ 252 (444)
|++++|+| ++.+|++|+.||.|++||++... ...+...+.+|...|++++|+|+ +++|++|+.
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 99999999 58999999999999999998111 11556678899999999999999 899999999
Q ss_pred CCcEEEEEcCCCCc-----ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152 253 TGDMMAVDLRGKGK-----PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK 307 (444)
Q Consensus 253 dg~i~iwd~~~~~~-----~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 307 (444)
||.|++||+++ +. .+.....|...|++++|+|++++|++++.||.|++|++.++
T Consensus 228 Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 228 DRTCIIWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SSCEEEEEESS-SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCEEEEecCCC-CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 99999999998 53 33344468899999999999999999999999999999853
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=271.03 Aligned_cols=263 Identities=6% Similarity=0.020 Sum_probs=202.5
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
.-...|.+++|+ |+|.++|+++.|++|+ +...++.+ . +|...|.+ ++|+| .++.+.+|+....
T Consensus 13 ~~~~~v~sv~~S-pDG~~iASas~D~TV~--d~~~~~~l---~--gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 13 EFEDWKNNLTWA-RDGTLYLTTFPDISIG--QPKYAKDI---N--CNSKNLFHVKEFPLE-------FENKLDFELAQQN 77 (588)
T ss_dssp CCSSSSCCEEEC-TTSCEEEECSSSEEEE--EECCCSCC---S--SBGGGTEEEEEECCC-------CCCTTTTSCCCSS
T ss_pred HhhccEEEEEEC-CCCCEEEEEcCCceee--ccccccee---c--CCCccEEEEEECCCC-------CcceEEEEeCCCc
Confidence 446899999999 7999999999999999 65544433 3 66666655 57877 4555555554322
Q ss_pred CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152 118 PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP 197 (444)
Q Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 197 (444)
... ...|...|.+++|+|+|.+||+++.||.|++|+... ++..+. +.. .-....|.+++|+|
T Consensus 78 ~~~--~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~-------------~~~~~sv~svafSP 139 (588)
T 2j04_A 78 GLL--NSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKG-------------NLSSRTYHCFEWNP 139 (588)
T ss_dssp CSS--TTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSS-------------CSTTTCEEEEEECS
T ss_pred eEe--ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCC-------------ccccccEEEEEEcC
Confidence 222 335688999999999999999999999999999644 444444 332 00011399999999
Q ss_pred CCCEEEEEeCCceEEEEEcCCCCCcc-------ceEEE----eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc
Q psy8152 198 NSDKVAVCSKQGYVRVYDPKITTQRR-------PVLKV----DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK 266 (444)
Q Consensus 198 ~~~~l~~~~~d~~i~i~d~~~~~~~~-------~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 266 (444)
+|++||+|+.||+|++|++. ... .+.++ .+|...|.+++|+|+| |++++.|+.|++|++.. +.
T Consensus 140 DG~~LAsgs~DGtVkIWd~~---~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~-~~ 213 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIR---KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA-SS 213 (588)
T ss_dssp SSSCEEEEETTSEEEEEECC---CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS-SS
T ss_pred CCCEEEEEcCCCEEEEEECC---CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC-Cc
Confidence 99999999999999999999 332 35666 5677899999999999 78888999999999987 65
Q ss_pred c---eeEe-ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCce-EEEeecCCceeEEEE--cCCCcccccchhhhh
Q psy8152 267 P---CYKY-KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKL-LRKDYMQSRLTSILV--RSDFSLENETKKEEQ 339 (444)
Q Consensus 267 ~---~~~~-~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~ 339 (444)
. ..++ .+|...|.+++|+ +++||+++ +++|++|++.+++. .....|...+..++| +++ +..
T Consensus 214 ~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d---------~~~ 281 (588)
T 2j04_A 214 HQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE---------STI 281 (588)
T ss_dssp SCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSS---------CEE
T ss_pred cccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC---------CCE
Confidence 3 3567 4788999999999 68999987 69999999999888 444468999999998 543 456
Q ss_pred ccccccCCCccccCC
Q psy8152 340 EHSEEKGDSDEKYDP 354 (444)
Q Consensus 340 ~~s~~~d~~i~~W~~ 354 (444)
+++++.+|+ ++|..
T Consensus 282 La~a~edG~-klw~~ 295 (588)
T 2j04_A 282 LLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEECSSCEE-EEEES
T ss_pred EEEEcCCCC-EEEee
Confidence 666666666 66654
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-33 Score=264.15 Aligned_cols=241 Identities=15% Similarity=0.101 Sum_probs=201.0
Q ss_pred CcccceEEEeeeccCCcEE-EEEEcCCeEEEEeCC--CCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEc
Q psy8152 40 TNKASVLALNWGNVEESEL-LIAYSGQKIKIYDTD--FKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRY 114 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~ 114 (444)
+|...|++++|+ |++.+| ++|+.||.|+||++. +++.+..+..+.|...|.++ +|++++|++++.+|.|++|++
T Consensus 100 ~~~~~v~~~~~s-~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLT-SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEEC-TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEc-CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 455689999999 789986 889999999999998 88888887655666666554 688999999999999999999
Q ss_pred CCCCccc----cccccCCCeEEEEEecc---CCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccC
Q psy8152 115 KTEPDQW----TNFNVGPQLECMKHNKH---SNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRR 186 (444)
Q Consensus 115 ~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 186 (444)
.++.... .+.+|...|++++|+|+ +++|++|+.|+.|++||+.+++.+.. +.+|..
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~---------------- 242 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH---------------- 242 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS----------------
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC----------------
Confidence 8877553 57789999999999999 99999999999999999999887766 445655
Q ss_pred ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC-------------------------CCCCeeEEEEc
Q psy8152 187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI-------------------------PDVALSCITTT 241 (444)
Q Consensus 187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------------------------~~~~i~~~~~~ 241 (444)
+|++++|+ ++++|++++.|+.|++||++ ..+++..+.. ....|.+++|+
T Consensus 243 --~v~~~~~s-d~~~l~s~~~d~~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 243 --FVSSICCG-KDYLLLSAGGDDKIFAWDWK---TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp --CEEEEEEC-STTEEEEEESSSEEEEEETT---TCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred --ceEEEEEC-CCCEEEEEeCCCeEEEEECC---CCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 79999999 99999999999999999999 6666666652 23568999999
Q ss_pred cCCCEEEEEc-CCCcEEEEEc--CCCC---cceeEeccccCceeEEEecCCCCEEEEE-EC------CCcEEEEEcCC
Q psy8152 242 NQSHYVIVGS-TTGDMMAVDL--RGKG---KPCYKYKGFAGCVKDIACPLNENLILSV-SL------DRHFRVHDFHS 306 (444)
Q Consensus 242 ~~~~~l~~~~-~dg~i~iwd~--~~~~---~~~~~~~~h~~~i~~~~~s~~~~~l~s~-~~------dg~i~vw~~~~ 306 (444)
|++++|++++ .++.|+||++ .. + .++..+..| ..|.+++|+|++ ++++. +. +..|.+|.+..
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEET
T ss_pred CCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEc
Confidence 9999999988 8999999999 55 5 667778877 889999999954 44444 32 45588887653
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.5e-33 Score=266.59 Aligned_cols=305 Identities=10% Similarity=0.050 Sum_probs=241.7
Q ss_pred EecCCCcEEEEEcCC--CccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee---ecc
Q psy8152 11 IGSSTGAFKGVNLSK--DKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD---VSF 85 (444)
Q Consensus 11 ~g~~dg~i~i~~~~~--~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~---~~~ 85 (444)
.++.++.+++|.+.. +. . ..+..+.+...+.+++|+ |++.++++++.++.|++||+.+++....+. ..+
T Consensus 94 ~~~~~~~~~l~~~d~~~~~--~---~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 167 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGIT--H---RFISRFKTGFQPKSVRFI-DNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKK 167 (433)
T ss_dssp SSGGGGTTCEEECCBTTCS--E---EEEEEEECSSCBCCCEES-SSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHT
T ss_pred cccCCCceEEEEECCCCCc--c---eEEEEEcCCCCceEEEEe-CCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccc
Confidence 345556455665544 32 1 222222334567799999 577788888888999999999888776332 235
Q ss_pred ccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEE-EeeCCCeEEEEEcCCceee
Q psy8152 86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIA-TGGKENDLKLWDLNTTKNI 162 (444)
Q Consensus 86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~~~~~ 162 (444)
|...+.++ ++++.++++++.++.|++|++.+++.+..+..|...+.+++|+|+++.++ +++.++.|++||+++++.+
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI 247 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence 66667655 56888999999999999999999888877777899999999999998885 4557999999999999888
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe--------CCceEEEEEcCCCCCccceEEEeCCCCC
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS--------KQGYVRVYDPKITTQRRPVLKVDIPDVA 234 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (444)
..+..+.. +.+++|+|++++|++++ .|+.|++||+. ..+.+..+ .+...
T Consensus 248 ~~~~~~~~-------------------~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~---~~~~~~~~-~~~~~ 304 (433)
T 3bws_A 248 RKTDKIGL-------------------PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD---KEKLIDTI-GPPGN 304 (433)
T ss_dssp EECCCCSE-------------------EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT---TTEEEEEE-EEEEC
T ss_pred EEecCCCC-------------------ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC---CCcEEeec-cCCCC
Confidence 77765444 89999999999998887 58999999998 55555544 34457
Q ss_pred eeEEEEccCCCEE-EEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC---------------CCc
Q psy8152 235 LSCITTTNQSHYV-IVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL---------------DRH 298 (444)
Q Consensus 235 i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~---------------dg~ 298 (444)
+.+++|+|+++++ ++++.++.|++||+.+ ++.+..+. +...+.+++|+|++++|++++. ||.
T Consensus 305 ~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 305 KRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp EEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 8899999999755 5679999999999998 88888876 6778999999999998888876 579
Q ss_pred EEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccc-cCCCccccCCC
Q psy8152 299 FRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEE-KGDSDEKYDPE 355 (444)
Q Consensus 299 i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~i~~W~~~ 355 (444)
|++||+.+++.+..+.....+.+++|+++ ++++++++ .|+.|++|++.
T Consensus 383 v~~~d~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 383 VYVIDTTTDTVKEFWEAGNQPTGLDVSPD---------NRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEECTT---------SCEEEEEETTTTEEEEEEET
T ss_pred EEEEECCCCcEEEEecCCCCCceEEEcCC---------CCEEEEEECCCCeEEEEEec
Confidence 99999999999888887778999998754 56666655 59999999875
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=269.60 Aligned_cols=280 Identities=11% Similarity=0.050 Sum_probs=211.8
Q ss_pred CCCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152 3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
++++.++|+++.|++|+ +....+ .+. +|...|++++|+ |++ .++.+.+|+. +....+.
T Consensus 24 SpDG~~iASas~D~TV~--d~~~~~-------~l~--gh~~~v~~V~Fs-Pdg-------~~~~~~~~~~---~~~~~~~ 81 (588)
T 2j04_A 24 ARDGTLYLTTFPDISIG--QPKYAK-------DIN--CNSKNLFHVKEF-PLE-------FENKLDFELA---QQNGLLN 81 (588)
T ss_dssp CTTSCEEEECSSSEEEE--EECCCS-------CCS--SBGGGTEEEEEE-CCC-------CCCTTTTSCC---CSSCSST
T ss_pred CCCCCEEEEEcCCceee--cccccc-------eec--CCCccEEEEEEC-CCC-------CcceEEEEeC---CCceEee
Confidence 35789999999999999 643333 233 899999999999 677 4555555544 3322322
Q ss_pred eccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCC-----CeEEEEEeccCCEEEEeeCCCeEEEEE
Q psy8152 83 VSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGP-----QLECMKHNKHSNIIATGGKENDLKLWD 155 (444)
Q Consensus 83 ~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~vwd 155 (444)
. .|...|.+ ++|+|.+||+++.+|.|++|+... ++..+. |.. .|.+++|+|+|++||+|+.||+|++|+
T Consensus 82 ~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 82 S-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp T-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEE
T ss_pred c-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEE
Confidence 1 33555654 589999999999999999999654 443334 554 599999999999999999999999999
Q ss_pred cCCcee-------eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc---ce
Q psy8152 156 LNTTKN-------IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR---PV 225 (444)
Q Consensus 156 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~~ 225 (444)
+..+.. +.+++.+.. .+..+|.+++|+|+| +++++.|++|++|++. ... ..
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~--------------gh~~~V~sVawSPdg--Laass~D~tVrlWd~~---~~~~~~~~ 218 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDA--------------GSKDWVTHIVWYEDV--LVAALSNNSVFSMTVS---ASSHQPVS 218 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCT--------------TCCCCEEEEEEETTE--EEEEETTCCEEEECCC---SSSSCCCE
T ss_pred CCCCccccccceeeeeeecccc--------------cccccEEEEEEcCCc--EEEEeCCCeEEEEECC---CCccccce
Confidence 998752 455532221 122389999999998 8889999999999998 333 34
Q ss_pred EEE-eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEe--cCCCCEEEEEECCCcEEEE
Q psy8152 226 LKV-DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC--PLNENLILSVSLDRHFRVH 302 (444)
Q Consensus 226 ~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~--s~~~~~l~s~~~dg~i~vw 302 (444)
.++ .+|...|.+++|+ +++||+++ ++.|++|++.. ++......+|...|..++| +|++..|++++.+|+ ++|
T Consensus 219 ~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw 293 (588)
T 2j04_A 219 RMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKN-YSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVL 293 (588)
T ss_dssp EEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTT-TEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEE
T ss_pred eeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCC-CeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEE
Confidence 556 3788899999999 68999887 69999999997 6663434389999999999 999999999999999 999
Q ss_pred EcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152 303 DFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 303 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~ 358 (444)
.... +.+. |++..+++. |+++++|+.....
T Consensus 294 ~~d~---------------~~~s---------pd~~l~a~~--d~~v~lW~~~g~~ 323 (588)
T 2j04_A 294 LEDE---------------LHVT---------ADNIIAPYL--EKKFKKWSTIWNE 323 (588)
T ss_dssp ESSS---------------EEEE---------CCCSSHHHH--HHHHHHTTTTTTS
T ss_pred eecc---------------EEEC---------CCceEEEEc--CCEEEEEECCCCc
Confidence 9871 3344 334445543 8889999875444
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=7.7e-34 Score=264.62 Aligned_cols=293 Identities=9% Similarity=0.060 Sum_probs=196.7
Q ss_pred ccEEEecCCCcEEEEEcCCCccc---eeeeeeecccCcccceEEEeee-------------------ccCCcEEEEEEcC
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCI---IKNIQNVKYITNKASVLALNWG-------------------NVEESELLIAYSG 64 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~-------------------~~~~~~l~~~~~d 64 (444)
..+++++.++.|.+|........ ......+....|...+.++.|+ ++++.+|++|+.|
T Consensus 31 ~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~d 110 (393)
T 4gq1_A 31 SNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQD 110 (393)
T ss_dssp TTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEETT
T ss_pred CCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeCC
Confidence 34555566888999987433210 0111112222334444444433 2566789999999
Q ss_pred CeEEEEeCCCCccccce---eeccccccEEEE--Ee--------CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE
Q psy8152 65 QKIKIYDTDFKNFNTNT---DVSFGEGDIVGV--SR--------YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE 131 (444)
Q Consensus 65 ~~i~vw~~~~~~~~~~~---~~~~~~~~v~~~--s~--------~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~ 131 (444)
++|+||++.++...... ...+|...|.++ +| ++++|++++.|++|+|||+.++.++.....|..+|.
T Consensus 111 ~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~ 190 (393)
T 4gq1_A 111 NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGI 190 (393)
T ss_dssp SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEE
T ss_pred CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcE
Confidence 99999999887654321 235788888776 44 678999999999999999998887777888999999
Q ss_pred EEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeee----CCC---cccccCccceeEEEEe-cCCCEE
Q psy8152 132 CMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSV----KPD---EFDLRRPVWVNGISFL-PNSDKV 202 (444)
Q Consensus 132 ~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~i~~~~~~-~~~~~l 202 (444)
+++|+|++ .+|++++.|++|++||+++++.......+........+ .+. .....+...+.++.|+ |+++.|
T Consensus 191 ~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l 270 (393)
T 4gq1_A 191 SVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGI 270 (393)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEE
T ss_pred EEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEE
Confidence 99999965 58999999999999999987765544333221111111 111 0112344568899987 789999
Q ss_pred EEEeCCceEEEEEcCCCCCccceEEEeCCCCCee------------------EEEEcc--CCCEEEEEcCCCcEEEEEcC
Q psy8152 203 AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS------------------CITTTN--QSHYVIVGSTTGDMMAVDLR 262 (444)
Q Consensus 203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~------------------~~~~~~--~~~~l~~~~~dg~i~iwd~~ 262 (444)
++++.|+++++||+. .......+..|...+. ...|+| ++.++++|+.||.|+|||+.
T Consensus 271 ~s~s~d~~i~vwd~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~ 347 (393)
T 4gq1_A 271 LAMCKSGAWLRWNLF---ANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTY 347 (393)
T ss_dssp EEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCEEEEECc---cCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECC
Confidence 999999999999998 3333333333322222 233443 34567789999999999999
Q ss_pred CCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 263 GKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 263 ~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
+ +.++..+.+|..+|++++|+|+|++||+++.+| +.+|.+
T Consensus 348 ~-~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 348 E-KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp C-TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred C-CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 9 888888888999999999999999999998776 656654
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=8e-32 Score=236.81 Aligned_cols=270 Identities=11% Similarity=0.007 Sum_probs=186.7
Q ss_pred EEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeE-EEEeCCC----Cccccceee
Q psy8152 9 IYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKI-KIYDTDF----KNFNTNTDV 83 (444)
Q Consensus 9 l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i-~vw~~~~----~~~~~~~~~ 83 (444)
|++++ ...|++|+...... -..+.... .|..+|..+.|.|...+++.++-..=.+ .++-+.- ......+..
T Consensus 57 ~~~~~-~~~v~lw~~~~~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s 132 (356)
T 2w18_A 57 IITAC-EDVVSLWKALDAWQ-WEKLYTWH--FAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK 132 (356)
T ss_dssp EEEEE-SSEEEEEEESSSSB-EEEEEEEE--CCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE
T ss_pred EEEec-cceEEEcccCCCcc-ceeeEEEe--ccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe
Confidence 44444 56999999988732 12223333 6778888888884233333333322111 1121111 111111111
Q ss_pred ccccccEEEEEeCCCeEEEEe--cCCcEEEEEc-CCCCccccccccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcC
Q psy8152 84 SFGEGDIVGVSRYDECILTAV--KSGDVKLWRY-KTEPDQWTNFNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLN 157 (444)
Q Consensus 84 ~~~~~~v~~~s~~~~~l~~~~--~dg~i~iw~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~ 157 (444)
.+|...+..+ +.++++.+++ .++.|++|++ .+++.+..+..|...++.++|+| ++.+|++++.|++|+|||+.
T Consensus 133 ~g~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 133 SGNIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEEEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred CCCeEEEEec-CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 2444555555 4555555543 5999999999 44777777788999999999999 67999999999999999999
Q ss_pred CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE------------EEEeCCceEEEEEcCCCCCccce
Q psy8152 158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV------------AVCSKQGYVRVYDPKITTQRRPV 225 (444)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~ 225 (444)
+++++.++.++.. ....+.+++|+|+++++ ++|+.|++|++||.. ..+.+
T Consensus 212 TGk~l~tL~g~~~---------------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~---tgk~l 273 (356)
T 2w18_A 212 TGQLLKKMHIDDS---------------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK---TTLSV 273 (356)
T ss_dssp TCCEEEEEECCC------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT---TTEEE
T ss_pred CCcEEEEEcCCCc---------------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC---CCEEE
Confidence 9999999876443 01247778899988765 668889999999998 66665
Q ss_pred EEE-----eCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCcee-EEEecCCCCEEEEEECCCcE
Q psy8152 226 LKV-----DIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVK-DIACPLNENLILSVSLDRHF 299 (444)
Q Consensus 226 ~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~-~~~~s~~~~~l~s~~~dg~i 299 (444)
..+ .+|...+.+..+ .+.++++|+.|++|+|||+.+ +++++++.+|...+. .++|+|+|++|++|+.|++|
T Consensus 274 ~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TI 350 (356)
T 2w18_A 274 GVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNI 350 (356)
T ss_dssp EEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCE
T ss_pred EEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence 544 255544444444 478999999999999999999 999999999987655 58999999999999999999
Q ss_pred EEEEc
Q psy8152 300 RVHDF 304 (444)
Q Consensus 300 ~vw~~ 304 (444)
+||++
T Consensus 351 klWd~ 355 (356)
T 2w18_A 351 FVYHY 355 (356)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 99986
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-33 Score=282.16 Aligned_cols=244 Identities=14% Similarity=0.132 Sum_probs=209.3
Q ss_pred ccccccEEEE--EeCCCeEEEEecCCcEEEEEcC--CCCccccccccCCCeEEEEEecc--CCEEEEeeCCCeEEEEEcC
Q psy8152 84 SFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK--TEPDQWTNFNVGPQLECMKHNKH--SNIIATGGKENDLKLWDLN 157 (444)
Q Consensus 84 ~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vwd~~ 157 (444)
.+|...|.++ +|++++|++|+.||.|++|++. +++....+.+|..+|++++|+|+ +++|++|+.||.|++||+.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 4788888877 6789999999999999999998 44556567789999999999986 9999999999999999999
Q ss_pred Cce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecC--CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152 158 TTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN--SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV 233 (444)
Q Consensus 158 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 233 (444)
+++ .+..+..|.. .|++++|+|+ +++|++|+.||.|++||++ .........+..|..
T Consensus 86 ~~~~~~~~~~~~h~~------------------~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~-~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 86 NGRWSQIAVHAVHSA------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFK-ENGTTSPIIIDAHAI 146 (753)
T ss_dssp TTEEEEEEEECCCSS------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECC-SSSCCCCEEEECCSS
T ss_pred CCcccccccccCCCC------------------CeEEEEECCCCCCCEEEEEeCCCcEEEEEee-cCCCcceeEeecCCC
Confidence 876 5666666666 7999999999 8999999999999999999 333455667788999
Q ss_pred CeeEEEEcc-------------CCCEEEEEcCCCcEEEEEcCCCC----cceeEeccccCceeEEEecCC---CCEEEEE
Q psy8152 234 ALSCITTTN-------------QSHYVIVGSTTGDMMAVDLRGKG----KPCYKYKGFAGCVKDIACPLN---ENLILSV 293 (444)
Q Consensus 234 ~i~~~~~~~-------------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~h~~~i~~~~~s~~---~~~l~s~ 293 (444)
.|.+++|+| ++.+|++|+.||.|++||+++ + .++..+.+|..+|++++|+|+ +++|+++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~-~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS-DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEET-TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccC-CcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEE
Confidence 999999999 589999999999999999988 5 556777899999999999999 8999999
Q ss_pred ECCCcEEEEEcCCCce------EEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 294 SLDRHFRVHDFHSKKL------LRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 294 ~~dg~i~vw~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
+.||.|++|++.++.. .....+...|++++|+++ +.++++++.||.|++|++..
T Consensus 226 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd---------g~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS---------GNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp ESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTT---------TCCEEEECSSSCEECCBCCS
T ss_pred ecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCC---------CCEEEEEcCCCEEEEEecCC
Confidence 9999999999998631 111237788999998754 67899999999999999884
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2e-31 Score=248.53 Aligned_cols=272 Identities=12% Similarity=0.066 Sum_probs=222.9
Q ss_pred cEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeE-EEEecCCcEEEEEcCCCCccccccccCCCeEEEE
Q psy8152 56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMK 134 (444)
Q Consensus 56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~ 134 (444)
..+++++.++.|++|++.+++.+..+..+. .....+++|++++| ++++.++.|++||+.+++.+..+ .+...+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~-~~~~~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV-PAGSSPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE-ECSSSEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE-ECCCCccceE
Confidence 467788899999999999998888775332 23345567899876 66778999999999999887644 4444999999
Q ss_pred EeccCCEEEE-eeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE-EEEeCCceEE
Q psy8152 135 HNKHSNIIAT-GGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV-AVCSKQGYVR 212 (444)
Q Consensus 135 ~~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~ 212 (444)
|+|++++|++ ++.++.|++||+.+++.+..+..+.. +.+++|+|++++| ++++.++.|+
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~-------------------~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS-------------------PLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS-------------------EEEEEECTTSSEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC-------------------cceEEECCCCCEEEEEeCCCCEEE
Confidence 9999997755 45679999999999988877765544 8999999999877 6888899999
Q ss_pred EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEE-EEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152 213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYV-IVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL 291 (444)
Q Consensus 213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~ 291 (444)
+||+. ..+.+..+..+. .+.+++|+|++++| ++++.++.|++||+++ ++.+..+. +...+.+++|+|++++|+
T Consensus 142 ~~d~~---~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~ 215 (391)
T 1l0q_A 142 VINTV---TKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTKAY 215 (391)
T ss_dssp EEETT---TTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSEEE
T ss_pred EEECC---CCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCEEE
Confidence 99998 677777777654 46999999999887 5778899999999999 88887776 456889999999999998
Q ss_pred EEE---CCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhc-cccccCCCccccCCCcccccccc
Q psy8152 292 SVS---LDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQE-HSEEKGDSDEKYDPEHFEMNQVT 363 (444)
Q Consensus 292 s~~---~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~i~~W~~~~~~~~~~~ 363 (444)
+++ .++.|++||+.+++++..+.....+.+++|+++ ++++ ++++.++.|++|++..++.....
T Consensus 216 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 216 VTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPD---------GKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTT---------SSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccC---------CCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 888 689999999999998888876667888888754 4445 67789999999999987665443
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.2e-31 Score=250.57 Aligned_cols=273 Identities=10% Similarity=0.079 Sum_probs=220.3
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeee-cccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNV-KYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
++..+++++.++.|++|++.+++.. ..... ...+|...|.+++|+ +++.++++++.++.|++|++.+++.+..+..
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~ 209 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIP-EHNELWVSQMQANAVHVFDLKTLAYKATVDL 209 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEG-GGTEEEEEEGGGTEEEEEETTTCCEEEEEEC
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEc-CCCEEEEEECCCCEEEEEECCCceEEEEEcC
Confidence 5677888888999999999988742 11111 112789999999998 7899999999999999999999888877763
Q ss_pred ccccccEEEEEeCCCeEEE-EecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee--------CCCeEEEE
Q psy8152 84 SFGEGDIVGVSRYDECILT-AVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG--------KENDLKLW 154 (444)
Q Consensus 84 ~~~~~~v~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~vw 154 (444)
+.......+++|+++++++ ++.++.|++||+.+++.+. ...+...+.+++|+|++++|++++ .|+.|++|
T Consensus 210 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~ 288 (433)
T 3bws_A 210 TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR-KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIY 288 (433)
T ss_dssp SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEE
T ss_pred CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEE
Confidence 3333334556788888754 4479999999999888775 444456699999999999999888 48899999
Q ss_pred EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE-EEEEeCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152 155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK-VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV 233 (444)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 233 (444)
|+.+++.+..+.. .. .+.+++|+|+++. +++++.++.|++||+. ..+.+..+. +..
T Consensus 289 d~~~~~~~~~~~~-~~------------------~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~---~~~~~~~~~-~~~ 345 (433)
T 3bws_A 289 SMDKEKLIDTIGP-PG------------------NKRHIVSGNTENKIYVSDMCCSKIEVYDLK---EKKVQKSIP-VFD 345 (433)
T ss_dssp ETTTTEEEEEEEE-EE------------------CEEEEEECSSTTEEEEEETTTTEEEEEETT---TTEEEEEEE-CSS
T ss_pred ECCCCcEEeeccC-CC------------------CcceEEECCCCCEEEEEecCCCEEEEEECC---CCcEEEEec-CCC
Confidence 9999877665532 22 4889999999965 5667899999999999 666666665 567
Q ss_pred CeeEEEEccCCCEEEEEcC---------------CCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEEC-CC
Q psy8152 234 ALSCITTTNQSHYVIVGST---------------TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSL-DR 297 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~-dg 297 (444)
.+.+++|+|++++|++++. ||.|++||+.+ ++.+..+.. ...+.+++|+|++++|++++. |+
T Consensus 346 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~ 423 (433)
T 3bws_A 346 KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-DTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDH 423 (433)
T ss_dssp SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT-TEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTT
T ss_pred CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC-CcEEEEecC-CCCCceEEEcCCCCEEEEEECCCC
Confidence 7899999999998888766 57999999999 998888876 457899999999999988875 99
Q ss_pred cEEEEEcCC
Q psy8152 298 HFRVHDFHS 306 (444)
Q Consensus 298 ~i~vw~~~~ 306 (444)
.|++|++..
T Consensus 424 ~i~v~~~~~ 432 (433)
T 3bws_A 424 QIRVYRRDG 432 (433)
T ss_dssp EEEEEEETT
T ss_pred eEEEEEecC
Confidence 999999864
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.9e-31 Score=244.97 Aligned_cols=263 Identities=11% Similarity=0.077 Sum_probs=203.4
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEE-EEEEcCCeEEEEeCCCCcccccee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESEL-LIAYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
+++.+|++|+.+| +++|++...+.. .. .+...+..+++. ++++.+ ++++.+++|+|||+.+++.+..+.
T Consensus 29 ~dg~~la~g~~~~-~~iw~~~~~~~~----~~----~~~~~~~~~~~~-~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~ 98 (355)
T 3vu4_A 29 QDQSCLILSTLKS-FEIYNVHPVAHI----MS----QEMRHLSKVRML-HRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK 98 (355)
T ss_dssp TTSSEEEEECSSE-EEEEEETTEEEE----EE----EECSCCCEEEEC-TTSSEEEEECSSTTEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEcCCE-EEEEecCCccee----ee----eecCCeEEEEEc-CCCCEEEEEECCccEEEEEECCCCcEEEEEE
Confidence 4567888888775 789998766531 11 112247788888 566666 567788999999999999888774
Q ss_pred eccccccEEEEEeCCCeEEEEecCCcEEEEEcCCC-CccccccccCCCeEEEEEeccCCEEEE--eeCCCeEEEEEcCCc
Q psy8152 83 VSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTE-PDQWTNFNVGPQLECMKHNKHSNIIAT--GGKENDLKLWDLNTT 159 (444)
Q Consensus 83 ~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~vwd~~~~ 159 (444)
+...|.++.+....++++ .++.|++|++.++ +.+..+.. +...+++++ .++++ |+.+|.|++||+.++
T Consensus 99 ---~~~~v~~v~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 99 ---VDAPVKDLFLSREFIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp ---CSSCEEEEEECSSEEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-
T ss_pred ---CCCceEEEEEcCCEEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCC
Confidence 456888888877777765 4789999999988 66543333 555667776 56666 688999999999986
Q ss_pred e---------------e-eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCce-EEEEEcCCCCCc
Q psy8152 160 K---------------N-IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGY-VRVYDPKITTQR 222 (444)
Q Consensus 160 ~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~~~~ 222 (444)
. + +..+.+|.. .|++++|+|++++|++|+.|++ |++||++ ..
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~------------------~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~---~~ 228 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTN------------------PIKMVRLNRKSDMVATCSQDGTIIRVFKTE---DG 228 (355)
T ss_dssp -----------------CCEEECCCSS------------------CEEEEEECTTSSEEEEEETTCSEEEEEETT---TC
T ss_pred CccccccccccccccCcccEEEEccCC------------------ceEEEEECCCCCEEEEEeCCCCEEEEEECC---CC
Confidence 5 1 556666666 8999999999999999999998 9999999 78
Q ss_pred cceEEEe-C-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc--ceeEec---------------------cccCc
Q psy8152 223 RPVLKVD-I-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK--PCYKYK---------------------GFAGC 277 (444)
Q Consensus 223 ~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~---------------------~h~~~ 277 (444)
.++..+. + |...|.+++|+|++++|++++.|++|+|||++. .. ....+. .+..+
T Consensus 229 ~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (355)
T 3vu4_A 229 VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN-DQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVR 307 (355)
T ss_dssp CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC-CSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCC
T ss_pred cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC-CCCcccccccceeeccccccccceeEEEeccCCCCC
Confidence 8888888 5 899999999999999999999999999999976 32 111111 11223
Q ss_pred eeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152 278 VKDIACPLNENLILSVSLDRHFRVHDFHSK 307 (444)
Q Consensus 278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 307 (444)
...++|++++++|++++.||.+++|++..+
T Consensus 308 ~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 308 GCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 467899999999999999999999998653
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.6e-32 Score=255.72 Aligned_cols=229 Identities=11% Similarity=0.072 Sum_probs=170.3
Q ss_pred eCCCeEEEEecCCcEEEEEcCCCCcc-----ccccccCCCeEEEEEec--------cCCEEEEeeCCCeEEEEEcCCcee
Q psy8152 95 RYDECILTAVKSGDVKLWRYKTEPDQ-----WTNFNVGPQLECMKHNK--------HSNIIATGGKENDLKLWDLNTTKN 161 (444)
Q Consensus 95 ~~~~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~vwd~~~~~~ 161 (444)
+++.+|++++.|++|+||++.++... ..+.+|...|++++|+| ++++||+|+.|++|+|||+.++.+
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 45668999999999999999887543 24678999999999998 788999999999999999998888
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceE--------------
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVL-------------- 226 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-------------- 226 (444)
+..+..+.. +|.+++|+|++ .+|++++.|++|++||++ ..+...
T Consensus 179 ~~~~~~~~~------------------~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~---t~~~~~~~~~~~~~~~~~~~ 237 (393)
T 4gq1_A 179 ILAGYPLSS------------------PGISVQFRPSNPNQLIVGERNGNIRIFDWT---LNLSAEENSQTELVKNPWLL 237 (393)
T ss_dssp EEEEEECSS------------------CEEEEEEETTEEEEEEEEETTSEEEEEETT---CCC----------CSCCCSE
T ss_pred eeeecCCCC------------------CcEEEEECCCCCceEEecCCCCEEEEEECC---CCcccccccccCCcccceEE
Confidence 877777776 79999999987 589999999999999998 222111
Q ss_pred -----------EEeCCCCCeeEEEEc-cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE------------
Q psy8152 227 -----------KVDIPDVALSCITTT-NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA------------ 282 (444)
Q Consensus 227 -----------~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~------------ 282 (444)
...+|...+.++.|+ |+++.|++++.|+.+++||+.. ++....+..|...+..+.
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSC
T ss_pred ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEccccccccccC
Confidence 123567788999987 7999999999999999999988 776666665554444333
Q ss_pred ------ecC--CCCEEEEEECCCcEEEEEcCCCceEEEe-ecCCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 283 ------CPL--NENLILSVSLDRHFRVHDFHSKKLLRKD-YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 283 ------~s~--~~~~l~s~~~dg~i~vw~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
|+| ++.++++|+.||+|++||+.+++++... .|..+|.+++|+++ +++|++++.+| +.+|.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspd---------G~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQD---------GSHLAIATEGS-VLLTR 386 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTT---------SSEEEEEESSE-EEEEE
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCC---------CCEEEEEeCCC-eEEEE
Confidence 333 2346778889999999999998877664 48889999999854 68899887665 55554
Q ss_pred CC
Q psy8152 354 PE 355 (444)
Q Consensus 354 ~~ 355 (444)
+.
T Consensus 387 L~ 388 (393)
T 4gq1_A 387 LM 388 (393)
T ss_dssp EG
T ss_pred Ee
Confidence 43
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.5e-31 Score=243.20 Aligned_cols=237 Identities=11% Similarity=0.021 Sum_probs=182.1
Q ss_pred EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceee
Q psy8152 94 SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVL 173 (444)
Q Consensus 94 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 173 (444)
.+++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+......+..+.... .+.
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~-~~~ 118 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK-VLR 118 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC-EEE
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc-eeE
Confidence 3577899999999999999999998875443 466888889887 9999999999999877432222111100 000
Q ss_pred EeeeCCCcccccCccceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEEEccCCCEEEEE
Q psy8152 174 VYSVKPDEFDLRRPVWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCITTTNQSHYVIVG 250 (444)
Q Consensus 174 ~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~ 250 (444)
... ..+...|.+++|+| ++++|++++.|++|++||++ ....+..+. .+...|++++|+|++.+|++|
T Consensus 119 ~~~-------~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~---~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 119 EIE-------VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE---DDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp EEE-------CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS---SSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred Eee-------cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC---CCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 000 01123699999999 99999999999999999999 565555553 345579999999999999999
Q ss_pred cCCCcEEEEEcCCCCcce-eEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCcee--EE
Q psy8152 251 STTGDMMAVDLRGKGKPC-YKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLT--SI 322 (444)
Q Consensus 251 ~~dg~i~iwd~~~~~~~~-~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~--~~ 322 (444)
+.||.|++||+++ ++.+ ..+.+ |..+|++++|+|++.+|++++ ++.|++||+++++.+..+. +...+. ++
T Consensus 189 ~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 189 SPDGILDVYNLSS-PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp CTTSCEEEEESSC-TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEE
T ss_pred cCCCEEEEEECCC-CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEE
Confidence 9999999999999 8877 88887 999999999999999999999 5599999999987655433 223333 47
Q ss_pred EEcCCCcccccchhhhhcccccc-CCCccccCCCcc
Q psy8152 323 LVRSDFSLENETKKEEQEHSEEK-GDSDEKYDPEHF 357 (444)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~s~~~-d~~i~~W~~~~~ 357 (444)
+|+ |++.++++++. ++.+++|++...
T Consensus 267 ~~~---------~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 267 DID---------DSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EEC---------TTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEC---------CCCCEEEEecCCCCcEEEEEEccc
Confidence 766 44678898877 999999988643
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=1.1e-29 Score=223.37 Aligned_cols=273 Identities=10% Similarity=0.063 Sum_probs=195.8
Q ss_pred ceEEEeeeccCCc--EEEEEEcCCeEEEEeCCCC---ccccceeeccccccEEEEEeCC---CeEEEEecCCcEEEEEcC
Q psy8152 44 SVLALNWGNVEES--ELLIAYSGQKIKIYDTDFK---NFNTNTDVSFGEGDIVGVSRYD---ECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 44 ~v~~~~~~~~~~~--~l~~~~~d~~i~vw~~~~~---~~~~~~~~~~~~~~v~~~s~~~---~~l~~~~~dg~i~iw~~~ 115 (444)
.+.++.|-++..+ .+++++. ..|++|+...+ +.+.+ .+.|..+|..+.|.. +++.++-.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~--------- 108 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYT--WHFAEVPVLQIVPVPDVYNLVCVALGN--------- 108 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEE--EECCSSCEEEECCCTTCCSCEEEEECS---------
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEE--EeccCceeEEEEEcCcccceeeeeecc---------
Confidence 4556666533222 5666666 79999999887 44444 458899999986533 233322111
Q ss_pred CCCccccccccCCCeEEEEEecc----CCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCccc----ccC
Q psy8152 116 TEPDQWTNFNVGPQLECMKHNKH----SNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFD----LRR 186 (444)
Q Consensus 116 ~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~ 186 (444)
-+...|+.++|+|+ ++++++++. .+++|++.+++.+.. ..+|...+..++++|++.. ..+
T Consensus 109 ---------~~~~~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~ 177 (356)
T 2w18_A 109 ---------LEIREIRALFCSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLM 177 (356)
T ss_dssp ---------SSEEEEEEECC------CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEEC
T ss_pred ---------ccccceEEEEECCCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccC
Confidence 12335777788887 777777763 377777777777666 4567777777777776532 234
Q ss_pred ccceeEEEEec---CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC---CCeeEEEEccCCCEE------------E
Q psy8152 187 PVWVNGISFLP---NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD---VALSCITTTNQSHYV------------I 248 (444)
Q Consensus 187 ~~~i~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l------------~ 248 (444)
+..++.++|+| ++.+|++++.|++|+|||+. +++.+.++.+|. ..+.+++|+|+|.++ +
T Consensus 178 ~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~---TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~la 254 (356)
T 2w18_A 178 PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK---TGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESES 254 (356)
T ss_dssp CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT---TCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------
T ss_pred CCceeeEEeeccCCCCceEEEecCCCcEEEEECC---CCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceee
Confidence 45688999999 67999999999999999999 888889888654 357778999999886 5
Q ss_pred EEcCCCcEEEEEcCCCCcceeEe-----ccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCcee-E
Q psy8152 249 VGSTTGDMMAVDLRGKGKPCYKY-----KGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLT-S 321 (444)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~-----~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~-~ 321 (444)
+|+.|++|++||+.+ ++.+..+ .+|...+.+..++ +.++++++.|++|+|||+.+++++.++. |...+. +
T Consensus 255 SGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~ 331 (356)
T 2w18_A 255 LRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSF 331 (356)
T ss_dssp ---CCEEEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCE
T ss_pred ccCCCcEEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEE
Confidence 678899999999999 8887765 3676665555554 7899999999999999999999999986 665544 5
Q ss_pred EEEcCCCcccccchhhhhccccccCCCccccCC
Q psy8152 322 ILVRSDFSLENETKKEEQEHSEEKGDSDEKYDP 354 (444)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~ 354 (444)
++|+++ +++++|++.|++||||++
T Consensus 332 vafSPD---------G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGT---------DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECSS---------SSEEEEECTTSCEEEEEE
T ss_pred EEECCC---------CCEEEEEECCCcEEEecC
Confidence 888854 678999999999999984
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.6e-29 Score=234.41 Aligned_cols=287 Identities=10% Similarity=0.046 Sum_probs=215.7
Q ss_pred ccEEEec----CCC----cEEEEEc--CCCccceeeeeeecccCcccceEEEeeecc-------------CCcEEEEEEc
Q psy8152 7 YNIYIGS----STG----AFKGVNL--SKDKCIIKNIQNVKYITNKASVLALNWGNV-------------EESELLIAYS 63 (444)
Q Consensus 7 ~~l~~g~----~dg----~i~i~~~--~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-------------~~~~l~~~~~ 63 (444)
..+++|+ .+| .|++||+ .+++.. .. ..+. +|...+..+++++. .+..++.++.
T Consensus 76 ~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~-~~-~~~~--~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~ 151 (415)
T 2hqs_A 76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVL-AQ-NSYK--VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQ 151 (415)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEE-EE-EEEE--ECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEE
T ss_pred CEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEE-ee-eEEE--cChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEe
Confidence 4566775 467 8999999 777641 11 1122 67888888887621 1566776665
Q ss_pred C------CeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCC---cEEEEEcCCCCccccccccCCCeEE
Q psy8152 64 G------QKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSG---DVKLWRYKTEPDQWTNFNVGPQLEC 132 (444)
Q Consensus 64 d------~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~v~~ 132 (444)
+ +.|++||+.. .....+. .|...+. +++|+|++|++++.++ .|++||+.+++.. .+..|...+.+
T Consensus 152 ~~~~~~~~~i~i~d~~g-~~~~~l~--~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~ 227 (415)
T 2hqs_A 152 TNGGQFPYELRVSDYDG-YNQFVVH--RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGA 227 (415)
T ss_dssp CSSSSCCEEEEEEETTS-CSCEEEE--EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEE
T ss_pred cCCCCccceEEEEcCCC-CCCEEEe--CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccC
Confidence 4 7999999974 4444444 4555554 5689999999999875 9999999998876 46778889999
Q ss_pred EEEeccCCEEE-EeeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-C
Q psy8152 133 MKHNKHSNIIA-TGGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-Q 208 (444)
Q Consensus 133 ~~~~~~~~~l~-~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d 208 (444)
++|+|+++.|+ +++.++ .|++||+.+++. ..+..+.. .+.+++|+|++++|++++. +
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~------------------~~~~~~~spdg~~l~~~s~~~ 288 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS------------------NNTEPTWFPDSQNLAFTSDQA 288 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS------------------CEEEEEECTTSSEEEEEECTT
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC------------------cccceEECCCCCEEEEEECCC
Confidence 99999999888 666555 499999988765 34444444 6899999999998888776 4
Q ss_pred c--eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC---CcEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152 209 G--YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT---GDMMAVDLRGKGKPCYKYKGFAGCVKDIAC 283 (444)
Q Consensus 209 ~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~ 283 (444)
+ .|++||+. ... ...+..+...+.+++|+|+|++|++++.+ ..|++||+.+ ++. ..+..|. .+.+++|
T Consensus 289 g~~~i~~~d~~---~~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~-~~~-~~l~~~~-~~~~~~~ 361 (415)
T 2hqs_A 289 GRPQVYKVNIN---GGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-GGV-QVLSSTF-LDETPSL 361 (415)
T ss_dssp SSCEEEEEETT---SSC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-CCE-EECCCSS-SCEEEEE
T ss_pred CCcEEEEEECC---CCC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC-CCE-EEecCCC-CcCCeEE
Confidence 4 67778887 333 34455566788899999999999987764 5899999998 665 4565554 8899999
Q ss_pred cCCCCEEEEEECCC---cEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152 284 PLNENLILSVSLDR---HFRVHDFHSKKLLRKDYMQSRLTSILVRSD 327 (444)
Q Consensus 284 s~~~~~l~s~~~dg---~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~ 327 (444)
+|+|++|++++.++ .|++|++..+.......+.+.|.+++|++.
T Consensus 362 spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 362 APNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp CTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred cCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence 99999999988877 799999986554333347789999999875
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=5.5e-29 Score=240.17 Aligned_cols=319 Identities=12% Similarity=0.063 Sum_probs=241.3
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeC--CCCcccccee
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDT--DFKNFNTNTD 82 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~--~~~~~~~~~~ 82 (444)
++..+++++.++.|.+||..+++. +..+.. +|. +.+++|+ |++++|++++.++.|++||+ .+++++..+.
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~----~~~i~~-g~~--~~~v~~s-pdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKI----VKVIDT-GYA--VHISRMS-ASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCE----EEEEEC-STT--EEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred CCEEEEEEcCCCeEEEEECCCceE----EEEEec-Ccc--cceEEEC-CCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 456788889999999999988875 222321 333 8899999 79999999999999999999 7888877765
Q ss_pred eccccccEEEEEe----CCCeEEEEec-CCcEEEEEcCCCCccccccc----------cC-CCeEEEEEeccC-CEEEEe
Q psy8152 83 VSFGEGDIVGVSR----YDECILTAVK-SGDVKLWRYKTEPDQWTNFN----------VG-PQLECMKHNKHS-NIIATG 145 (444)
Q Consensus 83 ~~~~~~~v~~~s~----~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~-~~l~~~ 145 (444)
. +....-.+|+| +|++|++++. +++|.+||..+++++..+.. |. ..+..+.++|++ .++++.
T Consensus 220 ~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 I-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp C-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred c-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 3 22334466789 9999998885 89999999999888764432 22 378999999955 456677
Q ss_pred eCCCeEEEEEcCCceeee--eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCc
Q psy8152 146 GKENDLKLWDLNTTKNIF--SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQR 222 (444)
Q Consensus 146 ~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~ 222 (444)
..++.|.+||+.+.+.+. .+. +.. .+.+++|+|++++|+++ ..+++|.+||+. ..
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~-~~~------------------~~~~~~~spdg~~l~va~~~~~~v~v~D~~---tg 356 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIG-AAP------------------FLHDGGWDSSHRYFMTAANNSNKVAVIDSK---DR 356 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEE-CCS------------------SCCCEEECTTSCEEEEEEGGGTEEEEEETT---TT
T ss_pred CCCCeEEEEEecCCCcceeEEec-cCc------------------CccCceECCCCCEEEEEecCCCeEEEEECC---CC
Confidence 788999999998865433 222 222 57889999999977655 568899999999 67
Q ss_pred cceEEEeC----CCCCeeEEEEccC-CCEEEEEc-CCCcEEEEEcCCC------CcceeEeccccCceeEEEecCCCCEE
Q psy8152 223 RPVLKVDI----PDVALSCITTTNQ-SHYVIVGS-TTGDMMAVDLRGK------GKPCYKYKGFAGCVKDIACPLNENLI 290 (444)
Q Consensus 223 ~~~~~~~~----~~~~i~~~~~~~~-~~~l~~~~-~dg~i~iwd~~~~------~~~~~~~~~h~~~i~~~~~s~~~~~l 290 (444)
+.+..+.. |......+ ++|+ +.+++++. .+++|.||++.+. .++++++.+|...+..++|+|++++|
T Consensus 357 ~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l 435 (543)
T 1nir_A 357 RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHL 435 (543)
T ss_dssp EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEE
T ss_pred eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcE
Confidence 77777764 43323333 4677 66666665 5799999999761 57889999998888999999999999
Q ss_pred EEEE-------CCCcEEEEEcCCCceE-EEe---------ecCCceeEEEEcCCCcccccchhhhhcccc-----ccCCC
Q psy8152 291 LSVS-------LDRHFRVHDFHSKKLL-RKD---------YMQSRLTSILVRSDFSLENETKKEEQEHSE-----EKGDS 348 (444)
Q Consensus 291 ~s~~-------~dg~i~vw~~~~~~~~-~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~-----~~d~~ 348 (444)
++++ .+++|.|||+.+++.. ..+ .+..++..+.|+++ +..+..+ +.++.
T Consensus 436 ~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---------g~~~~~s~~~~~~~~~~ 506 (543)
T 1nir_A 436 YVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR---------GDEVWFSVWNGKNDSSA 506 (543)
T ss_dssp EECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSS---------SSEEEEEEECCTTSCCE
T ss_pred EEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCC---------CCEEEEEeecCCCCCCe
Confidence 9987 2779999999998877 333 23567888888755 4444432 35799
Q ss_pred ccccCCCccccccccc
Q psy8152 349 DEKYDPEHFEMNQVTR 364 (444)
Q Consensus 349 i~~W~~~~~~~~~~~~ 364 (444)
|.|||..+.++....+
T Consensus 507 i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 507 LVVVDDKTLKLKAVVK 522 (543)
T ss_dssp EEEEETTTTEEEEEEC
T ss_pred EEEEECCCceEEEeec
Confidence 9999999888765553
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.8e-28 Score=229.63 Aligned_cols=285 Identities=12% Similarity=0.079 Sum_probs=213.4
Q ss_pred ccceEEEeeeccCCcEEEEEE----cCC----eEEEEeC--CCCccccceeeccccccEEEEE--e--------------
Q psy8152 42 KASVLALNWGNVEESELLIAY----SGQ----KIKIYDT--DFKNFNTNTDVSFGEGDIVGVS--R-------------- 95 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~----~d~----~i~vw~~--~~~~~~~~~~~~~~~~~v~~~s--~-------------- 95 (444)
...|....|.+....++++|+ .+| .|+|||+ .+++.+....+.+|...+..+. +
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 346777888844445676876 357 8999999 8888775444445555544331 1
Q ss_pred CCCeEEEEecC------CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC---eEEEEEcCCceeeeeee
Q psy8152 96 YDECILTAVKS------GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN---DLKLWDLNTTKNIFSAK 166 (444)
Q Consensus 96 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~ 166 (444)
.+..++.++.+ +.|++||+..+. ...+..|...+.+++|+|++++|++++.++ .|++||+.+++.. .+.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 25666666654 799999998544 445778999999999999999999999875 9999999988765 344
Q ss_pred cccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCc--eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152 167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQG--YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ 243 (444)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 243 (444)
.+.. .+.+++|+|+|++|+ +++.++ .|++||+. ... ...+..|...+.+++|+|+
T Consensus 220 ~~~~------------------~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~---~~~-~~~l~~~~~~~~~~~~spd 277 (415)
T 2hqs_A 220 SFPR------------------HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA---SGQ-IRQVTDGRSNNTEPTWFPD 277 (415)
T ss_dssp CCSS------------------CEEEEEECTTSSEEEEEECTTSSCEEEEEETT---TCC-EEECCCCSSCEEEEEECTT
T ss_pred cCCC------------------cccCEEEcCCCCEEEEEEecCCCceEEEEECC---CCC-EEeCcCCCCcccceEECCC
Confidence 4444 689999999999877 666655 49999998 333 3566778888999999999
Q ss_pred CCEEEEEcC-CC--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC---CcEEEEEcCCCceEEEeecCC
Q psy8152 244 SHYVIVGST-TG--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD---RHFRVHDFHSKKLLRKDYMQS 317 (444)
Q Consensus 244 ~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d---g~i~vw~~~~~~~~~~~~~~~ 317 (444)
|++|++++. ++ .|++||+.+ ++ +..+..|...+.+++|+|+|++|++++.+ ..|++|++.++++.. +....
T Consensus 278 g~~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~ 354 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTF 354 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSS
T ss_pred CCEEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCC
Confidence 999888775 44 678889887 55 44555677789999999999999988764 589999999988743 33334
Q ss_pred ceeEEEEcCCCcccccchhhhhccccccCC---CccccCCCccccccc
Q psy8152 318 RLTSILVRSDFSLENETKKEEQEHSEEKGD---SDEKYDPEHFEMNQV 362 (444)
Q Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~---~i~~W~~~~~~~~~~ 362 (444)
.+.+++|+++ ++++++++.++ .|.+|++......++
T Consensus 355 ~~~~~~~spd---------g~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 355 LDETPSLAPN---------GTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp SCEEEEECTT---------SSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred CcCCeEEcCC---------CCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 7888888744 56777777776 799999876554443
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=1.2e-26 Score=211.98 Aligned_cols=296 Identities=9% Similarity=0.037 Sum_probs=203.6
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-CeEEEEeCC--CCcccc--ce
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-QKIKIYDTD--FKNFNT--NT 81 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-~~i~vw~~~--~~~~~~--~~ 81 (444)
..+++++.++.|++|++..... +..+....|...+.+++|+ |++++|++++.+ +.|++|++. +++... .+
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGA----LTLTQVVDVPGQVQPMVVS-PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSC----EEEEEEEECSSCCCCEEEC-TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred EEEEeCCCCCeEEEEEECCCCc----EEEeeeEecCCCCceEEEC-CCCCEEEEeecCCCeEEEEEecCCCCceeecccc
Confidence 4445558899999999964221 1223333577889999999 799999988886 999999997 555432 33
Q ss_pred eeccccccEEEEEeCCCeEEEEec-CCcEEEEEcC---CCCccccccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEc
Q psy8152 82 DVSFGEGDIVGVSRYDECILTAVK-SGDVKLWRYK---TEPDQWTNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDL 156 (444)
Q Consensus 82 ~~~~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~ 156 (444)
.... .....+++|++++|++++. ++.|.+|++. ..+... .......+.+++|+|++++|++++ .++.|++|++
T Consensus 81 ~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 81 ALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD-VVEGLDGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp ECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEE-EECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred ccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccc-cccCCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 2222 3445677899998876665 8889999994 333332 333445689999999999888877 8899999999
Q ss_pred CC-ceeeee----eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCC-CCCccceEEEe
Q psy8152 157 NT-TKNIFS----AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKI-TTQRRPVLKVD 229 (444)
Q Consensus 157 ~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~-~~~~~~~~~~~ 229 (444)
.+ ++.... +.... ...+.+++|+|++++|+++ ..++.|++|++.. .........+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~ 221 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVE-----------------GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD 221 (343)
T ss_dssp CTTSCEEEEEEEEEECST-----------------TCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE
T ss_pred cCCCceeeecccccccCC-----------------CCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecc
Confidence 87 543321 11111 1247889999999876554 4889999999961 11122222232
Q ss_pred C---C---CCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCC---CcceeEeccccCceeEEEecCCCCEEEEEE-CCCc
Q psy8152 230 I---P---DVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGK---GKPCYKYKGFAGCVKDIACPLNENLILSVS-LDRH 298 (444)
Q Consensus 230 ~---~---~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~---~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~-~dg~ 298 (444)
. . ...+..++|+|++++|+ ++..++.|++|++... .+.+..+..+.. +.+++|+|++++|++++ .++.
T Consensus 222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 222 MMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp CSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCE
T ss_pred ccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCe
Confidence 1 1 23466899999998877 4557899999999820 345555554444 88999999999888887 6899
Q ss_pred EEEEEc--CCCce--EEEeecCCceeEEEEcCC
Q psy8152 299 FRVHDF--HSKKL--LRKDYMQSRLTSILVRSD 327 (444)
Q Consensus 299 i~vw~~--~~~~~--~~~~~~~~~i~~~~~~~~ 327 (444)
|.+|++ .++++ +..+.......+++|.+.
T Consensus 301 v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 301 ISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSCCEEEEEEE
T ss_pred EEEEEEcCCCceeeEccccccCCCCeeEEEEcc
Confidence 999955 45543 334445456777777653
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=6.8e-26 Score=218.61 Aligned_cols=289 Identities=12% Similarity=0.041 Sum_probs=219.1
Q ss_pred CCCcccEEEecCCCcEEEEEc--CCCccceeeeeeecccCcccceEEEeeecc----CCcEEEEEEc-CCeEEEEeCCCC
Q psy8152 3 LADDYNIYIGSSTGAFKGVNL--SKDKCIIKNIQNVKYITNKASVLALNWGNV----EESELLIAYS-GQKIKIYDTDFK 75 (444)
Q Consensus 3 ~~~~~~l~~g~~dg~i~i~~~--~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~l~~~~~-d~~i~vw~~~~~ 75 (444)
++++.+|++++.++.|++|++ .+.+. +..+ .+...+..++|+ | ++++|++++. +++|.|||..++
T Consensus 187 spdg~~l~v~~~d~~V~v~D~~~~t~~~----~~~i---~~g~~p~~va~s-p~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 187 SASGRYLLVIGRDARIDMIDLWAKEPTK----VAEI---KIGIEARSVESS-KFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSSSCEE----EEEE---ECCSEEEEEEEC-CSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred CCCCCEEEEECCCCeEEEEECcCCCCcE----EEEE---ecCCCcceEEeC-CCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 356789999999999999999 55543 2222 345678999999 8 9999998884 899999999999
Q ss_pred ccccceeecc--------c-cccEEE--EEeCCC-eEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEE
Q psy8152 76 NFNTNTDVSF--------G-EGDIVG--VSRYDE-CILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNII 142 (444)
Q Consensus 76 ~~~~~~~~~~--------~-~~~v~~--~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l 142 (444)
+++..+...+ | ...+.+ +++++. ++++...++.|.+||+.+.+.+. ....+...+.+++|+|++++|
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEE
Confidence 9888876432 2 224444 467665 46667778999999998876543 233466778899999999977
Q ss_pred EEee-CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEe-CCceEEEEEcCCC
Q psy8152 143 ATGG-KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCS-KQGYVRVYDPKIT 219 (444)
Q Consensus 143 ~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~-~d~~i~i~d~~~~ 219 (444)
++++ .+++|.+||+.+++++..+..... .++.....+ ++|+ +..++++. .+++|.+||+.+.
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~--------------ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSALVDVGKT--------------PHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPK 403 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSS--------------BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred EEEecCCCeEEEEECCCCeEEEeeccCCC--------------CCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCC
Confidence 6554 589999999999998877764211 011122222 4777 46666765 5899999999810
Q ss_pred C----CccceEEEeCCCCCeeEEEEccCCCEEEEEc-------CCCcEEEEEcCCCCcce-eEe--------ccccCcee
Q psy8152 220 T----QRRPVLKVDIPDVALSCITTTNQSHYVIVGS-------TTGDMMAVDLRGKGKPC-YKY--------KGFAGCVK 279 (444)
Q Consensus 220 ~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~-~~~--------~~h~~~i~ 279 (444)
. ..+.+.++..|...+..++|+|++++|++++ .+++|.|||+.+ ++.. ..+ ..+...+.
T Consensus 404 ~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 482 (543)
T 1nir_A 404 NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN-LDAKYQVLPIAEWADLGEGAKRVV 482 (543)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC-TTSCCEEECHHHHHCCCSSCCEEE
T ss_pred CCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC-CCCCeEEeechhhcccCCCCCceE
Confidence 1 1788899999988889999999999999987 267999999999 7766 443 34567899
Q ss_pred EEEecCCCCEEEEEE-----CCCcEEEEEcCCCceEEEeec
Q psy8152 280 DIACPLNENLILSVS-----LDRHFRVHDFHSKKLLRKDYM 315 (444)
Q Consensus 280 ~~~~s~~~~~l~s~~-----~dg~i~vw~~~~~~~~~~~~~ 315 (444)
.+.|+|+|+.|+++. .++.|.|||..+++++.++..
T Consensus 483 ~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 483 QPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp EEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred eccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence 999999999888663 379999999999999887763
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=2.5e-25 Score=202.32 Aligned_cols=277 Identities=9% Similarity=0.082 Sum_probs=196.6
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCcc-ccce
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNF-NTNT 81 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~-~~~~ 81 (444)
..+..+++++.++.|++|++.+++.. ..+. .+...+ +++|+ |++++|++++. ++.|++||+.+++. ...+
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~----~~~~--~~~~~~-~~~~s-~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEIL----NQIT--LGYDFV-DTAIT-SDCSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEE----EEEE--CCCCEE-EEEEC-SSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred CCCEEEEEecCCCeEEEEeCccccee----eeEE--ccCCcc-eEEEc-CCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 34566788889999999999888741 1222 234555 99999 78987777665 89999999998887 5555
Q ss_pred eeccccccE-EEEEeCCCeEEEEecCC---cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEe-eCCCe-EEEEE
Q psy8152 82 DVSFGEGDI-VGVSRYDECILTAVKSG---DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATG-GKEND-LKLWD 155 (444)
Q Consensus 82 ~~~~~~~~v-~~~s~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~vwd 155 (444)
.... .... .+++|++++|+++..++ .|.+|++.+++.+. ...+.....+++|+|++++|+++ ..++. |.+|+
T Consensus 80 ~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 80 QEGQ-SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS-TIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp EECS-SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE-EEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred ccCC-CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE-EEECCCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 4322 2233 67899999998555553 89999999888775 44455667999999999866555 55578 99999
Q ss_pred cCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccc---eEEEeCC
Q psy8152 156 LNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRP---VLKVDIP 231 (444)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~---~~~~~~~ 231 (444)
+.....+.... .. .+ .....+..++|+|++++|+ ++..++.|++||+. .... +..+..+
T Consensus 158 ~~~~g~~~~~~-~~----~~---------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~---~~~~~~~~~~~~~~ 220 (331)
T 3u4y_A 158 IDADGVLFDTG-QE----FI---------SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ---NPENITLLNAVGTN 220 (331)
T ss_dssp ECTTCCEEEEE-EE----EE---------CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS---STTSCEEEEEEECS
T ss_pred ECCCCcEeecC-Cc----cc---------cCCCCccceEECCCCCEEEEEeCCCCeEEEEECC---CCcccceeeeccCC
Confidence 98643332211 00 00 0012478999999998655 55568999999998 5555 6666644
Q ss_pred CCCeeEEEEccCCCEEEEEc-CCCcEEEEEcCCCCcc--eeEeccc----cC---ceeEEEecCCCCEEEEEEC-CCcEE
Q psy8152 232 DVALSCITTTNQSHYVIVGS-TTGDMMAVDLRGKGKP--CYKYKGF----AG---CVKDIACPLNENLILSVSL-DRHFR 300 (444)
Q Consensus 232 ~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~~h----~~---~i~~~~~s~~~~~l~s~~~-dg~i~ 300 (444)
..+..++|+|+|++|++++ .++.|.+||+.+ ++. +..+..+ .. .+..++|+|++++|++++. ++.|+
T Consensus 221 -~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 298 (331)
T 3u4y_A 221 -NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS-GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELK 298 (331)
T ss_dssp -SCCCCEEECTTSSEEEEECSSEEEEEEEETTT-TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEE
T ss_pred -CCCceEEECCCCCEEEEEEcCCCEEEEEECCC-CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEE
Confidence 5578999999999776654 577899999998 776 3333322 22 2356899999998866654 56999
Q ss_pred EEEcCCCce
Q psy8152 301 VHDFHSKKL 309 (444)
Q Consensus 301 vw~~~~~~~ 309 (444)
+|++.....
T Consensus 299 v~d~~~~~~ 307 (331)
T 3u4y_A 299 VFTISGKVV 307 (331)
T ss_dssp EEETTSCEE
T ss_pred EEEecCCcc
Confidence 999987554
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=3.3e-26 Score=231.03 Aligned_cols=295 Identities=7% Similarity=0.046 Sum_probs=211.6
Q ss_pred CCcccEEEecC-CC-----cEEEEEcCCCccceeeeeeecccCcc----------------------cceEEEeeeccCC
Q psy8152 4 ADDYNIYIGSS-TG-----AFKGVNLSKDKCIIKNIQNVKYITNK----------------------ASVLALNWGNVEE 55 (444)
Q Consensus 4 ~~~~~l~~g~~-dg-----~i~i~~~~~~~~~~~~~~~~~~~~h~----------------------~~v~~~~~~~~~~ 55 (444)
+++.+|++++. +| .|++|++.+++. ..+ +....+. ..|.+++|+ |++
T Consensus 46 pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S-pDg 120 (741)
T 2ecf_A 46 PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT--RLL--VDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS-PDA 120 (741)
T ss_dssp TTSSEEEEEECCSSCTTEEEEEEEETTTCCE--EEE--ECGGGTC--------------------CCEESCCCEEC-TTS
T ss_pred cCCCEEEEEeccCCCCcccEEEEEECCCCce--eEc--cchhhcccccccccchhhhhhhhhhhccccCcceeEEC-CCC
Confidence 46778888887 88 899999988873 111 1111122 348999999 799
Q ss_pred cEEEEEEcCCeEEEEeCCCC---ccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCC---
Q psy8152 56 SELLIAYSGQKIKIYDTDFK---NFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQ--- 129 (444)
Q Consensus 56 ~~l~~~~~d~~i~vw~~~~~---~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~--- 129 (444)
++|++++. +.|++|++.++ .... +..+.......+++|+|++|++++. +.|++|++.+++.......+...
T Consensus 121 ~~l~~~~~-~~i~~~d~~~~~~~~~~~-l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 121 QRLLFPLG-GELYLYDLKQEGKAAVRQ-LTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp SEEEEEET-TEEEEEESSSCSTTSCCB-CCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred CEEEEEeC-CcEEEEECCCCCcceEEE-cccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceec
Confidence 99999987 99999999987 4433 3322223334567899999998874 69999999988766433333332
Q ss_pred -------------eEEEEEeccCCEEEEeeCCC---------------------------------eEEEEEcCC-ceee
Q psy8152 130 -------------LECMKHNKHSNIIATGGKEN---------------------------------DLKLWDLNT-TKNI 162 (444)
Q Consensus 130 -------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~vwd~~~-~~~~ 162 (444)
+.+++|+|+|++|++++.++ .|++||+.+ ++..
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 277 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ 277 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE
Confidence 47899999999999988765 788889887 6654
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-----CceEEEEEcCCCCCccceEEEeCCCC----
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-----QGYVRVYDPKITTQRRPVLKVDIPDV---- 233 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~---- 233 (444)
....... +...+.+++| |+|++|++++. +..|++||+. .......+..+..
T Consensus 278 ~~~~~~~----------------~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~ 337 (741)
T 2ecf_A 278 WIDLGKE----------------QDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA---SNQQRVLAHETSPTWVP 337 (741)
T ss_dssp EECCCSC----------------SSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT---TCCEEEEEEEECSSCCC
T ss_pred EecCCCC----------------cceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC---CCceEEEEEcCCCCcCC
Confidence 3322101 1226899999 99999887653 6789999998 4444444443332
Q ss_pred CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE-EecCCCCEEEE-EECCC--cEEEEEcCC-Cc
Q psy8152 234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI-ACPLNENLILS-VSLDR--HFRVHDFHS-KK 308 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~-~~s~~~~~l~s-~~~dg--~i~vw~~~~-~~ 308 (444)
.+..++|+|+|+++++++.+|.++||.+...+. +..+..|...|..+ .|+|+++.|+. ++.++ .++||++.. +.
T Consensus 338 ~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG 416 (741)
T ss_dssp CCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC
T ss_pred cCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC
Confidence 456899999999999999999888887763245 77888888888887 59999987755 44455 899999864 55
Q ss_pred eEEEeecCCceeEEEEcCC
Q psy8152 309 LLRKDYMQSRLTSILVRSD 327 (444)
Q Consensus 309 ~~~~~~~~~~i~~~~~~~~ 327 (444)
.+..+.....+..++|+++
T Consensus 417 ~~~~l~~~~~~~~~~~spd 435 (741)
T 2ecf_A 417 QPQRLSKAPGMHSASFARN 435 (741)
T ss_dssp CCEECCCSCSEEEEEECTT
T ss_pred CeeecccCCCceEEEECCC
Confidence 4555555666778888765
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=4e-25 Score=200.94 Aligned_cols=280 Identities=9% Similarity=0.026 Sum_probs=199.2
Q ss_pred eeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec-CCcEEEEEcCCCCc-ccccccc
Q psy8152 49 NWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK-SGDVKLWRYKTEPD-QWTNFNV 126 (444)
Q Consensus 49 ~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~-~~~~~~~ 126 (444)
.|.+..+..+++++.++.|++||+.+++....+.... ..+..+++|+++++++++. ++.|.+||+.+++. ......+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGY-DFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCC-CEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccC-CcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 4552334456678888999999999999887776433 2336677899997666665 88999999999887 5444445
Q ss_pred CCCeEEEEEeccCCEEEEeeCCC---eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152 127 GPQLECMKHNKHSNIIATGGKEN---DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA 203 (444)
Q Consensus 127 ~~~v~~~~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 203 (444)
..+..+++|+|++++|+++..++ .|.+||+.+++.+..+..... +.+++|+|++++|+
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-------------------~~~~~~spdg~~l~ 143 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD-------------------AVGIAISPNGNGLI 143 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT-------------------EEEEEECTTSSCEE
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC-------------------ccceEECCCCCEEE
Confidence 55555599999999999665553 899999999888777665444 78999999997554
Q ss_pred -EEeCCce-EEEEEcCCCCCccce-EEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcc---eeEeccccC
Q psy8152 204 -VCSKQGY-VRVYDPKITTQRRPV-LKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKP---CYKYKGFAG 276 (444)
Q Consensus 204 -~~~~d~~-i~i~d~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~---~~~~~~h~~ 276 (444)
+...++. |.+|++...+..... .........+..++|+|+|++|++ +..++.|++||+.+ ++. +..+.. ..
T Consensus 144 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~~ 221 (331)
T 3u4y_A 144 LIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVGT-NN 221 (331)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-SS
T ss_pred EEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-CC
Confidence 5556678 999999811111111 122234455789999999996654 55789999999998 887 777764 35
Q ss_pred ceeEEEecCCCCEEEEEE-CCCcEEEEEcCCCce--EEEeecC-----Cc---eeEEEEcCCCcccccchhhhhc-cccc
Q psy8152 277 CVKDIACPLNENLILSVS-LDRHFRVHDFHSKKL--LRKDYMQ-----SR---LTSILVRSDFSLENETKKEEQE-HSEE 344 (444)
Q Consensus 277 ~i~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~--~~~~~~~-----~~---i~~~~~~~~~~~~~~~~~~~~~-~s~~ 344 (444)
.+..++|+|++++|++++ .++.|.+|++.++++ +..+... .. ...++|++ +++++ ++..
T Consensus 222 ~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp---------dg~~l~v~~~ 292 (331)
T 3u4y_A 222 LPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNK---------TETKLFISAN 292 (331)
T ss_dssp CCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECT---------TSSEEEEEET
T ss_pred CCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECC---------CCCEEEEecC
Confidence 678999999999776654 578899999999887 3332211 11 23356664 45555 5566
Q ss_pred cCCCccccCCCcccc
Q psy8152 345 KGDSDEKYDPEHFEM 359 (444)
Q Consensus 345 ~d~~i~~W~~~~~~~ 359 (444)
.++.|.+|++.....
T Consensus 293 ~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 293 ISRELKVFTISGKVV 307 (331)
T ss_dssp TTTEEEEEETTSCEE
T ss_pred CCCcEEEEEecCCcc
Confidence 678999999986554
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=9.2e-26 Score=201.31 Aligned_cols=255 Identities=11% Similarity=0.061 Sum_probs=189.3
Q ss_pred EecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Cccccceeecc-ccc
Q psy8152 11 IGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSF-GEG 88 (444)
Q Consensus 11 ~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~-~~~ 88 (444)
.++.++.|++|++.+++. ..+. .|...|.+++|+ |++++|++++ ++.|++|++.+ ++.......+. ...
T Consensus 17 ~~~~~~~i~~~d~~~~~~-----~~~~--~~~~~v~~~~~s-pdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM-----RVVW--QTPELFEAPNWS-PDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTTEE-----EEEE--EESSCCEEEEEC-TTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCCce-----eeec--cCCcceEeeEEC-CCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccc
Confidence 346789999999988763 1222 578899999999 7999999987 78999999998 77665543211 122
Q ss_pred cEEEEEeCCCeEEEEec--CCcEEEEE--cCCCCccccccccCCCeEEEEEeccCCEEE-EeeCCCeEEEEEcCC-ceee
Q psy8152 89 DIVGVSRYDECILTAVK--SGDVKLWR--YKTEPDQWTNFNVGPQLECMKHNKHSNIIA-TGGKENDLKLWDLNT-TKNI 162 (444)
Q Consensus 89 ~v~~~s~~~~~l~~~~~--dg~i~iw~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~-~~~~ 162 (444)
...+++|++++|++++. ++.+.||. +.++... ...+...+.+++|+|++++|+ +++.++.+++|++.. ....
T Consensus 88 ~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR--LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE 165 (297)
T ss_dssp SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE--ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred cceEECCCCCEEEEEEeCCCCcceEEEEECCCCceE--EeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence 33678899999999983 34555554 4555433 333344599999999999877 777899999998643 2233
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 241 (444)
..+..+.. .+.+++|+|++++|++++ .++.+++|++. .....+..+..+...+..++|+
T Consensus 166 ~~~~~~~~------------------~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~s 225 (297)
T 2ojh_A 166 TRLTHGEG------------------RNDGPDYSPDGRWIYFNSSRTGQMQIWRVR--VDGSSVERITDSAYGDWFPHPS 225 (297)
T ss_dssp EECCCSSS------------------CEEEEEECTTSSEEEEEECTTSSCEEEEEE--TTSSCEEECCCCSEEEEEEEEC
T ss_pred eEcccCCC------------------ccccceECCCCCEEEEEecCCCCccEEEEC--CCCCCcEEEecCCcccCCeEEC
Confidence 33333333 689999999999887665 58999999986 2344556677777789999999
Q ss_pred cCCCEEEEEcCC-----------CcEEEEEcCCCCcc--eeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152 242 NQSHYVIVGSTT-----------GDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPLNENLILSVSLDR 297 (444)
Q Consensus 242 ~~~~~l~~~~~d-----------g~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg 297 (444)
|++++|++++.+ +.|++||+.+ ++. +..+.+|...+.+++|+|++++|++++.+.
T Consensus 226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG-GNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS-CSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCEEEEEEcCCCCCcccccCceEEEEEecCC-CCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 999999887765 5699999988 655 444457888999999999999998887654
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=8.7e-26 Score=205.66 Aligned_cols=273 Identities=10% Similarity=-0.035 Sum_probs=205.4
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCccc-ceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeec
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA-SVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
.+|++++.++.|++|++.+++. +..+.. ++.. .+.+++|+ |++++++ ++..++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~----~~~~~~-~~~~~~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV----DKVITI-ADAGPTPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE----EEEEEC-TTCTTCCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcE----EEEEEc-CCCCCCccceEEc-CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 5789999999999999988764 122221 2222 48899999 7887665 4556789999999999887766542
Q ss_pred c-----ccccEEEEEeCCCeEEEEe------------cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC
Q psy8152 85 F-----GEGDIVGVSRYDECILTAV------------KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK 147 (444)
Q Consensus 85 ~-----~~~~v~~~s~~~~~l~~~~------------~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 147 (444)
. ......+++|++++|+++. .++.|.+|++.+++.+. .......+.+++|+|++++|+++
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~-- 152 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-AFEAPRQITMLAWARDGSKLYGL-- 152 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-EEECCSSCCCEEECTTSSCEEEE--
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE-EEeCCCCcceeEECCCCCEEEEe--
Confidence 2 0334467889999988886 57999999999887765 33345678899999999988888
Q ss_pred CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-Cc-----------------
Q psy8152 148 ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QG----------------- 209 (444)
Q Consensus 148 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~----------------- 209 (444)
++.|.+||+.+++.+..+..... ...+.|+|++.+|+..+. ++
T Consensus 153 ~~~i~~~d~~~~~~~~~~~~~~~-------------------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (337)
T 1pby_B 153 GRDLHVMDPEAGTLVEDKPIQSW-------------------EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPAD 213 (337)
T ss_dssp SSSEEEEETTTTEEEEEECSTTT-------------------TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTS
T ss_pred CCeEEEEECCCCcEeeeeecccc-------------------CCCceeCCCccEEeeeccCCCceeeeeecccccccccc
Confidence 58899999999887766654331 112256777765544332 22
Q ss_pred ------eEEEEEcCCCCCccc-eEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE
Q psy8152 210 ------YVRVYDPKITTQRRP-VLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA 282 (444)
Q Consensus 210 ------~i~i~d~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~ 282 (444)
.|.+||+. ..+. ...+..+...+.+++|+|++++|+++ ++.|++||+.+ ++.+..+..+ ..+.+++
T Consensus 214 ~~~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~ 286 (337)
T 1pby_B 214 PTAYRTGLLTMDLE---TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK-NASIKRVPLP-HSYYSVN 286 (337)
T ss_dssp GGGEEEEEEEEETT---TCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT-TEEEEEEECS-SCCCEEE
T ss_pred ccccccceEEEeCC---CCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC-CcCcceecCC-CceeeEE
Confidence 57899998 3332 34445566678899999999999988 78999999998 8888877643 4678999
Q ss_pred ecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 283 CPLNENLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 283 ~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
|+|++++|++++.++.|++|++.+++.+..+.
T Consensus 287 ~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 287 VSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp ECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 99999999999999999999999998887765
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1.7e-25 Score=224.53 Aligned_cols=317 Identities=10% Similarity=0.021 Sum_probs=216.8
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeeccc------------CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI------------TNKASVLALNWGNVEESELLIAYSGQKIKIYDTD 73 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~ 73 (444)
+..++.++.+| | +||+.+++.....+.....+ .+...|.+++|+ |+ .+++.+. ++.|++||+.
T Consensus 35 g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~s-pd-~~~~~~~-~~~i~~~d~~ 109 (706)
T 2z3z_A 35 GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDA-GR-GLVVLFT-QGGLVGFDML 109 (706)
T ss_dssp TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEET-TT-TEEEEEE-TTEEEEEETT
T ss_pred CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEEC-CC-CeEEEEE-CCEEEEEECC
Confidence 34566667777 8 99998887310222111100 012569999999 67 6666554 5999999998
Q ss_pred CCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCC-----CCccccccccCCC--------------eEEEE
Q psy8152 74 FKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKT-----EPDQWTNFNVGPQ--------------LECMK 134 (444)
Q Consensus 74 ~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~~~--------------v~~~~ 134 (444)
+++...... ........+++|+|++|+++ .++.|++|++.+ ++.......+... +.+++
T Consensus 110 ~~~~~~l~~-~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~ 187 (706)
T 2z3z_A 110 ARKVTYLFD-TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTF 187 (706)
T ss_dssp TTEEEEEEC-CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEE
T ss_pred CCceEEccC-CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEE
Confidence 887654432 12233346789999999985 779999999998 7766433333332 48999
Q ss_pred EeccCCEEEEee---------------------------------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc
Q psy8152 135 HNKHSNIIATGG---------------------------------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE 181 (444)
Q Consensus 135 ~~~~~~~l~~~~---------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (444)
|+|+|++|++++ .+..|++||+.+++..........
T Consensus 188 ~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~----------- 256 (706)
T 2z3z_A 188 WSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK----------- 256 (706)
T ss_dssp ECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT-----------
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC-----------
Confidence 999999999987 446799999988775443321111
Q ss_pred ccccCccceeEEEEecCCCEEEEEeCCc-----eEEEEEcCCCCCccceEEEe--CCC---CCeeEEEEcc--CCCEEEE
Q psy8152 182 FDLRRPVWVNGISFLPNSDKVAVCSKQG-----YVRVYDPKITTQRRPVLKVD--IPD---VALSCITTTN--QSHYVIV 249 (444)
Q Consensus 182 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~--~~~---~~i~~~~~~~--~~~~l~~ 249 (444)
...+.+++|+|++++|++++.++ .|++||+. .......+. .+. ..+..++|+| +|++|++
T Consensus 257 -----~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~ 328 (706)
T 2z3z_A 257 -----EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE---TGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ 328 (706)
T ss_dssp -----TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT---TCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred -----ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC---CCceeeEEEEccCCCeECccCCceeecCCCCEEEEE
Confidence 12589999999999999887765 99999998 442222221 122 2346789999 9999999
Q ss_pred EcCCCcEEEEEcCCCCcceeEeccccCceeE-EEecCCCCEEEEEECC-C----cEEEEEcCCCceEEEeecCCceeEEE
Q psy8152 250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNENLILSVSLD-R----HFRVHDFHSKKLLRKDYMQSRLTSIL 323 (444)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~~~l~s~~~d-g----~i~vw~~~~~~~~~~~~~~~~i~~~~ 323 (444)
++.++.++||.+...+..+..+..|...+.. ++|+|+++.|+.++.+ + .|+.|++.+++ +..+.+...+.+++
T Consensus 329 ~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~ 407 (706)
T 2z3z_A 329 SRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGMHRTQ 407 (706)
T ss_dssp ECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSEEEEE
T ss_pred EccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCceEEEE
Confidence 9999999999887227778888888878877 7999999877665544 3 67777887766 34555777788888
Q ss_pred EcCCCcccccchhhhhccccccC----CCccccCCCccc
Q psy8152 324 VRSDFSLENETKKEEQEHSEEKG----DSDEKYDPEHFE 358 (444)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~s~~~d----~~i~~W~~~~~~ 358 (444)
|+++ +++++....+ +.+.+|++.+++
T Consensus 408 ~spd---------g~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 408 LSPD---------GSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ECTT---------SSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ECCC---------CCEEEEEecCCCCCcEEEEEECCCCe
Confidence 8755 4555544322 559999988765
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=2.3e-24 Score=197.59 Aligned_cols=262 Identities=13% Similarity=0.083 Sum_probs=208.0
Q ss_pred CcccceEEEeeeccCCcEEEEEEc-------CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEE-EecCCcEEE
Q psy8152 40 TNKASVLALNWGNVEESELLIAYS-------GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILT-AVKSGDVKL 111 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~-------d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~-~~~dg~i~i 111 (444)
.....+..++|+ |++++|++++. ++.|.+||..+++....+.. +....-.+++|+++++++ ...++.|.+
T Consensus 38 ~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 38 AVGKGAYEMAYS-QQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp EEESSEEEEEEE-TTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred hhccCccceEEC-CCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 345678899999 78888888774 56899999999998887764 223445678999986554 455799999
Q ss_pred EEcCCCCccccccccCC---------CeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeeeecccceeeEeeeCCC
Q psy8152 112 WRYKTEPDQWTNFNVGP---------QLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD 180 (444)
Q Consensus 112 w~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (444)
||+.+++.+..+..+.. .+.+++|+|+++++++++ .++.|.+||+.+++.+..+..+..
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---------- 185 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK---------- 185 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT----------
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC----------
Confidence 99999887654433322 278999999999887776 478999999999988877763433
Q ss_pred cccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeC----CCCCeeEEEEccCCCEEEEEcC-CCc
Q psy8152 181 EFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDI----PDVALSCITTTNQSHYVIVGST-TGD 255 (444)
Q Consensus 181 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~-dg~ 255 (444)
.+.+++|+|++++|++++.++.|.+||+. ..+.+..+.. +...+..++|+|++++|++++. ++.
T Consensus 186 --------~~~~~~~s~dg~~l~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 186 --------MSTGLALDSEGKRLYTTNADGELITIDTA---DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp --------TCCCCEEETTTTEEEEECTTSEEEEEETT---TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred --------ccceEEECCCCCEEEEEcCCCeEEEEECC---CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 47889999999999999999999999998 6666666654 4456778999999997776554 589
Q ss_pred EEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEE-CCCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152 256 MMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVS-LDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD 327 (444)
Q Consensus 256 i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~ 327 (444)
|.+||+.+ ++.+..+.... ...++|+|+++++++++ .++.|.+||+.+++.+..+.....+.+++|+++
T Consensus 255 v~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d 324 (353)
T 3vgz_A 255 VLVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSAD 324 (353)
T ss_dssp EEEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTT
T ss_pred EEEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCC
Confidence 99999999 88888877533 25789999999666555 689999999999999888887778888888755
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.6e-25 Score=226.03 Aligned_cols=293 Identities=10% Similarity=0.011 Sum_probs=211.4
Q ss_pred ccceEEEeeeccCCcEEEEEEc-CC-----eEEEEeCCCCccccceeecccc------------------------ccEE
Q psy8152 42 KASVLALNWGNVEESELLIAYS-GQ-----KIKIYDTDFKNFNTNTDVSFGE------------------------GDIV 91 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~-d~-----~i~vw~~~~~~~~~~~~~~~~~------------------------~~v~ 91 (444)
...|.+++|+ |++++|++++. ++ .|++|++.+++....+..+.+. ....
T Consensus 36 ~~~~~~~~~S-pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVA-PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEEC-TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEe-cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 4679999999 79999999998 88 9999999998876666433322 2345
Q ss_pred EEEeCCCeEEEEecCCcEEEEEcCCC---CccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecc
Q psy8152 92 GVSRYDECILTAVKSGDVKLWRYKTE---PDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNV 168 (444)
Q Consensus 92 ~~s~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 168 (444)
+++|+|++|++++. +.|++|++.++ ... .+..|...+.+++|+|+|++|++++. +.|++||+.+++.......+
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~-~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR-QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCC-BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEE-EcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCC
Confidence 77999999999887 89999999988 544 47778888999999999999999874 69999999987765443322
Q ss_pred cceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc---------------------------------eEEEEE
Q psy8152 169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG---------------------------------YVRVYD 215 (444)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------------------------------~i~i~d 215 (444)
...+. .-.++.........+.+++|+|+|++|++++.++ .|++||
T Consensus 192 ~~~~~--~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 192 STTIG--NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CSSEE--ESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred cccee--ccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 21000 0000000000001147899999999999887665 788999
Q ss_pred cCCCCC-ccceEEEe--CCCCCeeEEEEccCCCEEEEEcC-----CCcEEEEEcCCCCcceeEeccccC----ceeEEEe
Q psy8152 216 PKITTQ-RRPVLKVD--IPDVALSCITTTNQSHYVIVGST-----TGDMMAVDLRGKGKPCYKYKGFAG----CVKDIAC 283 (444)
Q Consensus 216 ~~~~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~h~~----~i~~~~~ 283 (444)
+. . ........ .+...+..++| |+|++|++++. +..|++||+.+ ++....+..+.. .+..++|
T Consensus 270 ~~---~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 270 PA---EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp SS---TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT-CCEEEEEEEECSSCCCCCSCCEE
T ss_pred CC---CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC-CceEEEEEcCCCCcCCcCCceEE
Confidence 88 3 33333222 36677899999 99999987653 56799999999 887777765543 4568899
Q ss_pred cCCCCEEEEEECCCcEEEEEcC-CCceEEEee-cCCceeEE-EEcCCCcccccchhhhhc-cccccCC--CccccCCC
Q psy8152 284 PLNENLILSVSLDRHFRVHDFH-SKKLLRKDY-MQSRLTSI-LVRSDFSLENETKKEEQE-HSEEKGD--SDEKYDPE 355 (444)
Q Consensus 284 s~~~~~l~s~~~dg~i~vw~~~-~~~~~~~~~-~~~~i~~~-~~~~~~~~~~~~~~~~~~-~s~~~d~--~i~~W~~~ 355 (444)
+|+|+++++++.+|.++||.+. .++ ...+. +...+..+ .|+++ ++.+ ++++.++ .++||.+.
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~d---------g~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEK---------AGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETT---------TTEEEEEECSSCTTCBEEEEEE
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCC---------CCEEEEEEeCCCCceEEEEEEE
Confidence 9999999999999988888765 344 44443 55567666 47654 4444 4555555 89999875
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=2.4e-23 Score=191.70 Aligned_cols=296 Identities=8% Similarity=0.076 Sum_probs=199.0
Q ss_pred cccEEEecC----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC----CeEEEEeCCC--C
Q psy8152 6 DYNIYIGSS----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG----QKIKIYDTDF--K 75 (444)
Q Consensus 6 ~~~l~~g~~----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d----~~i~vw~~~~--~ 75 (444)
..++++|+. ++.|++|.+....... ..+... +...+..++|+ |++++|++++.+ +.|.+|++.. +
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~---~~~~~~-~~~~p~~l~~s-pdg~~l~~~~~~~~~~~~v~~~~~~~~~g 87 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGES---LPLSDA-EVANPSYLIPS-ADGKFVYSVNEFSKDQAAVSAFAFDKEKG 87 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCE---EEEEEE-ECSCCCSEEEC-TTSSEEEEEECCSSTTCEEEEEEEETTTT
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCE---EEeecc-cCCCCceEEEC-CCCCEEEEEEccCCCCCcEEEEEEeCCCC
Confidence 457788854 5689999885432212 222222 57778889999 799999998885 7999998865 4
Q ss_pred ccccceeeccccccEEEEEeCCCeEEEEe-cCCcEEEEEcCCCCcccccc--------------ccCCCeEEEEEeccCC
Q psy8152 76 NFNTNTDVSFGEGDIVGVSRYDECILTAV-KSGDVKLWRYKTEPDQWTNF--------------NVGPQLECMKHNKHSN 140 (444)
Q Consensus 76 ~~~~~~~~~~~~~~v~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~ 140 (444)
+.........+......+++++++|++++ .++.|.+|++.....+.... .+...+.+++|+|+++
T Consensus 88 ~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 88 TLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp EEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred cEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 44333332333445556666888877776 57899999997544332111 1233468899999999
Q ss_pred EEEEee-CCCeEEEEEcCCcee------ee------eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-
Q psy8152 141 IIATGG-KENDLKLWDLNTTKN------IF------SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS- 206 (444)
Q Consensus 141 ~l~~~~-~d~~i~vwd~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~- 206 (444)
+|++++ .++.|++|++..... +. ...... ...+..++|+|++++|++++
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------~~~~~~~~~spdg~~l~v~~~ 230 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-----------------GSGPRHLIFNSDGKFAYLINE 230 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-----------------TCCEEEEEECTTSSEEEEEET
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC-----------------CCCCeEEEEcCCCCEEEEEcC
Confidence 766555 488999999876431 11 111110 11478999999999887766
Q ss_pred CCceEEEEEcCCCCCccceEEEe---CCCCCeeEEEEccCCCEEEEEcC--CCcEEEEEcCC-CCc--ceeEeccccCce
Q psy8152 207 KQGYVRVYDPKITTQRRPVLKVD---IPDVALSCITTTNQSHYVIVGST--TGDMMAVDLRG-KGK--PCYKYKGFAGCV 278 (444)
Q Consensus 207 ~d~~i~i~d~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~-~~~--~~~~~~~h~~~i 278 (444)
.++.|.+|++. ......+..+. .+......++|+|+|++|+++.. ++.|.+|++.. .++ .+..+.. ...+
T Consensus 231 ~~~~v~v~~~~-~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~ 308 (361)
T 3scy_A 231 IGGTVIAFRYA-DGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHP 308 (361)
T ss_dssp TTCEEEEEEEE-TTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCC
T ss_pred CCCeEEEEEec-CCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCC
Confidence 68999999998 23223333333 23345679999999999877655 48999999962 033 4444444 4567
Q ss_pred eEEEecCCCCEEEEEE-CCCcEEEEEc--CCCceEEEe--ecCCceeEEEEc
Q psy8152 279 KDIACPLNENLILSVS-LDRHFRVHDF--HSKKLLRKD--YMQSRLTSILVR 325 (444)
Q Consensus 279 ~~~~~s~~~~~l~s~~-~dg~i~vw~~--~~~~~~~~~--~~~~~i~~~~~~ 325 (444)
.+++|+|++++|++++ .++.|.+|.+ .++++.... .+...+.|++|.
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 309 RNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred ceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 8999999999888887 6789999654 567765443 244567888775
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=7.6e-25 Score=199.40 Aligned_cols=269 Identities=12% Similarity=0.037 Sum_probs=205.7
Q ss_pred cEEEEEEcCCeEEEEeCCCCccccceeeccc--cccEEEEEeCCCeE-EEEecCCcEEEEEcCCCCcccccc-cc----C
Q psy8152 56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFG--EGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNF-NV----G 127 (444)
Q Consensus 56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~--~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~-~~----~ 127 (444)
.+|++++.++.|++||+.+++.+..+..... .....+++|+++++ +++..++.|.+||+.+++.+..+. .+ .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5789999999999999999988877764321 34457789999765 455567899999999888765332 12 2
Q ss_pred CCeEEEEEeccCCEEEEee------------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 128 PQLECMKHNKHSNIIATGG------------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 128 ~~v~~~~~~~~~~~l~~~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
..+.+++|+|++++|++++ .++.|.+||+.+++.+..+.... .+.+++|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~ 142 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-------------------QITMLAW 142 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-------------------SCCCEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-------------------CcceeEE
Confidence 2677899999999998886 57999999999888776665433 3788999
Q ss_pred ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC---------------------
Q psy8152 196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG--------------------- 254 (444)
Q Consensus 196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------------- 254 (444)
+|++++|+++ ++.|++||+. ....+..+..+.. ...+.|+|++++|+..+..+
T Consensus 143 s~dg~~l~~~--~~~i~~~d~~---~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (337)
T 1pby_B 143 ARDGSKLYGL--GRDLHVMDPE---AGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA 216 (337)
T ss_dssp CTTSSCEEEE--SSSEEEEETT---TTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred CCCCCEEEEe--CCeEEEEECC---CCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccc
Confidence 9999888877 6899999998 6666666654431 12337899988776544332
Q ss_pred ---cEEEEEcCCCCcce-eEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcc
Q psy8152 255 ---DMMAVDLRGKGKPC-YKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSL 330 (444)
Q Consensus 255 ---~i~iwd~~~~~~~~-~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 330 (444)
.|.+||+.+ ++.. ..+..+...+.+++|+|++++|+++ ++.|++||+.+++.+..+.....+.+++|+++
T Consensus 217 ~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d--- 290 (337)
T 1pby_B 217 YRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTD--- 290 (337)
T ss_dssp EEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTT---
T ss_pred cccceEEEeCCC-CCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCC---
Confidence 468999998 7664 2333566678899999999999888 79999999999998888877777888888754
Q ss_pred cccchhhhhccccccCCCccccCCCcccccc
Q psy8152 331 ENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ 361 (444)
Q Consensus 331 ~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~ 361 (444)
++++++++.++.|++|++..++...
T Consensus 291 ------g~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 291 ------GSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp ------SCEEEEESBSSEEEEEETTTCCEEE
T ss_pred ------CCEEEEEcCCCcEEEEECcCCcEEE
Confidence 5667777889999999998776544
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=2.1e-23 Score=191.00 Aligned_cols=283 Identities=10% Similarity=0.059 Sum_probs=189.6
Q ss_pred ccEEEecC----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc---CCeEEEEeCCCCcccc
Q psy8152 7 YNIYIGSS----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS---GQKIKIYDTDFKNFNT 79 (444)
Q Consensus 7 ~~l~~g~~----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~---d~~i~vw~~~~~~~~~ 79 (444)
+.+++|+. ++.|++|.+....... ..+....+...+..++|+ |+++ |++++. ++.|++|++.+++...
T Consensus 3 ~~~~vg~y~~~~~~~i~v~~~d~~tg~~---~~~~~~~~~~~p~~~a~s-pdg~-l~~~~~~~~~~~v~~~~~~~g~~~~ 77 (347)
T 3hfq_A 3 ERILFGTYTKKTSQGIYQGTLDTTAKTL---TNDGLLAATQNPTYLALS-AKDC-LYSVDKEDDEGGIAAWQIDGQTAHK 77 (347)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTTEE---EEEEEEEECSCCCCEEEC-TTCE-EEEEEEETTEEEEEEEEEETTEEEE
T ss_pred cEEEEEeccCCCCCCEEEEEEcCCCCeE---EEeeeeeccCCcceEEEc-cCCe-EEEEEecCCCceEEEEEecCCcEEE
Confidence 45677743 4568888876533212 222222456778899999 7888 665554 5899999997666432
Q ss_pred --ceeeccccccEEEEEeCCCeEEEEe-cCCcEEEEEcCC-CCcc--ccccc---------cCCCeEEEEEeccCCEEEE
Q psy8152 80 --NTDVSFGEGDIVGVSRYDECILTAV-KSGDVKLWRYKT-EPDQ--WTNFN---------VGPQLECMKHNKHSNIIAT 144 (444)
Q Consensus 80 --~~~~~~~~~~v~~~s~~~~~l~~~~-~dg~i~iw~~~~-~~~~--~~~~~---------~~~~v~~~~~~~~~~~l~~ 144 (444)
.+........-.+++|++++|++++ .++.|.+|++.. +... ..... +...+.+++|+|+++++++
T Consensus 78 ~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~ 157 (347)
T 3hfq_A 78 LNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVI 157 (347)
T ss_dssp EEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEE
T ss_pred eeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEE
Confidence 2222233444577899999888887 678999999963 3221 11111 1234889999999997777
Q ss_pred eeCCCeEEEEEcC-Cceeeee--eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE-EeCCceEEEEEcCC-C
Q psy8152 145 GGKENDLKLWDLN-TTKNIFS--AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV-CSKQGYVRVYDPKI-T 219 (444)
Q Consensus 145 ~~~d~~i~vwd~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~-~ 219 (444)
...++.|++|++. .++.... +.... ...+..++|+|+|++|++ +..++.|++|++.. .
T Consensus 158 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~-----------------g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 158 DLGSDKVYVYNVSDAGQLSEQSVLTMEA-----------------GFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECCT-----------------TCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred eCCCCEEEEEEECCCCcEEEeeeEEcCC-----------------CCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 7778999999998 4443221 11111 114778999999986655 56788999999871 1
Q ss_pred CCccceEEEeCCC------CCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCC--CcceeEeccccCceeEEEecCCCCEE
Q psy8152 220 TQRRPVLKVDIPD------VALSCITTTNQSHYVI-VGSTTGDMMAVDLRGK--GKPCYKYKGFAGCVKDIACPLNENLI 290 (444)
Q Consensus 220 ~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~--~~~~~~~~~h~~~i~~~~~s~~~~~l 290 (444)
.....+..+.... ..+..++|+|+|++|+ +...++.|.+|++... .+.+..+..+...+..++|+|++++|
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV 300 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence 1122233333222 3478899999999875 4556899999999731 24556666666678999999999988
Q ss_pred EEEECC-CcEEEE--EcCCCceEE
Q psy8152 291 LSVSLD-RHFRVH--DFHSKKLLR 311 (444)
Q Consensus 291 ~s~~~d-g~i~vw--~~~~~~~~~ 311 (444)
++++.+ +.|.+| +..++++..
T Consensus 301 ~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 301 VVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEcCCCcEEEEEEeCCCCeEEe
Confidence 888765 899999 555676653
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.4e-24 Score=226.66 Aligned_cols=324 Identities=13% Similarity=0.077 Sum_probs=233.7
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC------CeEEEEeCCCCccccc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG------QKIKIYDTDFKNFNTN 80 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d------~~i~vw~~~~~~~~~~ 80 (444)
..|+.++. +.|++|++..++. ..+. .|...|.+++|| |++++|++++.+ ..|++|++.+++. ..
T Consensus 25 ~~iaf~~~-~~l~~~~~~gg~~-----~~lt--~~~~~v~~~~~S-PDG~~la~~s~~~~~~~~~~i~~~d~~~g~~-~~ 94 (1045)
T 1k32_A 25 DRIIFVCC-DDLWEHDLKSGST-----RKIV--SNLGVINNARFF-PDGRKIAIRVMRGSSLNTADLYFYNGENGEI-KR 94 (1045)
T ss_dssp TEEEEEET-TEEEEEETTTCCE-----EEEE--CSSSEEEEEEEC-TTSSEEEEEEEESTTCCEEEEEEEETTTTEE-EE
T ss_pred CEEEEEEC-CcEEEEECCCCcE-----EEee--eCCCcccCeEEC-CCCCEEEEEEeeccCCCCCeEEEEECCCCCe-EE
Confidence 35555554 6899999987762 2232 789999999999 799999987653 4799999988764 33
Q ss_pred eeecccccc---------EEEEEeCCCeEEEEecC------CcEEEEEcCCCCccc------------------------
Q psy8152 81 TDVSFGEGD---------IVGVSRYDECILTAVKS------GDVKLWRYKTEPDQW------------------------ 121 (444)
Q Consensus 81 ~~~~~~~~~---------v~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~------------------------ 121 (444)
+. .|... ..+|+|+|+++++++.+ ..|.+|++.+++...
T Consensus 95 lt--~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~ 172 (1045)
T 1k32_A 95 IT--YFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFE 172 (1045)
T ss_dssp CC--CCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSC
T ss_pred cc--cCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCC
Confidence 33 44444 46678999977777644 357788876554221
Q ss_pred -------------------------cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEe
Q psy8152 122 -------------------------TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVY 175 (444)
Q Consensus 122 -------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~ 175 (444)
.+..|...+.++.|+++ .++++++.++.++||.+.. +.....+..+. .+...
T Consensus 173 ~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~ 250 (1045)
T 1k32_A 173 LPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPR 250 (1045)
T ss_dssp CTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEE
T ss_pred ccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-Cccee
Confidence 11235666778888877 6667777888899998754 33333333332 22333
Q ss_pred eeCCCcccc---------------------c------------CccceeEEEEe-cCCCEEEEEeCCceEEEEEcCCCCC
Q psy8152 176 SVKPDEFDL---------------------R------------RPVWVNGISFL-PNSDKVAVCSKQGYVRVYDPKITTQ 221 (444)
Q Consensus 176 ~~~~~~~~~---------------------~------------~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~ 221 (444)
.++|++..+ . +...+.+++|+ |+|++|++++ ++.|++|++. .
T Consensus 251 ~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~---~ 326 (1045)
T 1k32_A 251 HLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVS---G 326 (1045)
T ss_dssp EEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTT---S
T ss_pred eEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCC---C
Confidence 455543210 0 11258899999 9999888887 7899999988 3
Q ss_pred ccceEEEeCCCC-CeeEEEEccCCCEEEEEcCCCcEE-EEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcE
Q psy8152 222 RRPVLKVDIPDV-ALSCITTTNQSHYVIVGSTTGDMM-AVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHF 299 (444)
Q Consensus 222 ~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i 299 (444)
.. ...+..+.. .+..++|+ +|+.|++++.++.|. +|++.. ++.. .+.+|...+..++|+|+|++|++++.++.|
T Consensus 327 ~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~-~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v 402 (1045)
T 1k32_A 327 TY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT-GKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEI 402 (1045)
T ss_dssp SB-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT-CCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred Cc-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC-CCce-EecCCccceeeeEECCCCCEEEEECCCCeE
Confidence 33 334566666 78999999 999999988888888 999887 5543 444788899999999999999999999999
Q ss_pred EEEEcCCCceEEEe-ecCCceeEEEEcCCCcccccchhhhhccccccC----------CCccccCCCcccccc
Q psy8152 300 RVHDFHSKKLLRKD-YMQSRLTSILVRSDFSLENETKKEEQEHSEEKG----------DSDEKYDPEHFEMNQ 361 (444)
Q Consensus 300 ~vw~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d----------~~i~~W~~~~~~~~~ 361 (444)
++||+.++++.... .+...+.+++|+++ ++++++++.+ +.|++|++.+++...
T Consensus 403 ~~~d~~tg~~~~~~~~~~~~v~~~~~SpD---------G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~ 466 (1045)
T 1k32_A 403 MTVDLETGKPTVIERSREAMITDFTISDN---------SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA 466 (1045)
T ss_dssp EEEETTTCCEEEEEECSSSCCCCEEECTT---------SCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE
T ss_pred EEEECCCCceEEeccCCCCCccceEECCC---------CCeEEEEecCccccccCCCCCeEEEEECCCCcEEE
Confidence 99999999887766 47778889988754 5677766654 489999998766433
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1.5e-24 Score=193.44 Aligned_cols=254 Identities=9% Similarity=-0.049 Sum_probs=186.4
Q ss_pred EEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCC-CCcccccccc-CCCeEEEEEec
Q psy8152 60 IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKT-EPDQWTNFNV-GPQLECMKHNK 137 (444)
Q Consensus 60 ~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~-~~~v~~~~~~~ 137 (444)
.++.++.|++|++.+++...... +.......+++|++++|++++ ++.|++|++.+ ++.......+ ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQ-TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEE-ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCceeeecc-CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 34678999999999888765442 222333455689999999876 78999999998 7776544444 47789999999
Q ss_pred cCCEEEEee--CCCeEEEEEc--CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEE
Q psy8152 138 HSNIIATGG--KENDLKLWDL--NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVR 212 (444)
Q Consensus 138 ~~~~l~~~~--~d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~ 212 (444)
++++|++++ .++.+.||.+ .+++ ...+..+. .+..++|+|++++|+ ++..++.++
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-------------------~~~~~~~spdg~~l~~~~~~~~~~~ 154 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-------------------PSYWHGWSPDGKSFTYCGIRDQVFD 154 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-------------------SEEEEEECTTSSEEEEEEEETTEEE
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-------------------CccceEECCCCCEEEEEECCCCceE
Confidence 999999998 3344555544 4443 23332222 388899999998777 778899999
Q ss_pred EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc-CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE
Q psy8152 213 VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS-TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL 291 (444)
Q Consensus 213 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~ 291 (444)
+|++. ........+..+...+.+++|+|++++|++++ .++.++||++...+..+..+..|...+..++|+|++++|+
T Consensus 155 l~~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 232 (297)
T 2ojh_A 155 IYSMD--IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVV 232 (297)
T ss_dssp EEEEE--TTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEE
T ss_pred EEEEE--CCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEE
Confidence 99975 12334455667778899999999999887655 5899999998732667788888888899999999999998
Q ss_pred EEECC-----------CcEEEEEcCCCceEEEe---ecCCceeEEEEcCCCcccccchhhhhccccccC
Q psy8152 292 SVSLD-----------RHFRVHDFHSKKLLRKD---YMQSRLTSILVRSDFSLENETKKEEQEHSEEKG 346 (444)
Q Consensus 292 s~~~d-----------g~i~vw~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d 346 (444)
+++.+ +.|++|++.+++..... .+...+.+++|+ |+++++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s---------pdg~~l~~~~~~ 292 (297)
T 2ojh_A 233 FVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWS---------PDGDEFAYVRYF 292 (297)
T ss_dssp EEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBC---------TTSSEEEEEEEC
T ss_pred EEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceEC---------CCCCEEEEEEec
Confidence 88766 56999999987654332 356677777665 445666666554
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.1e-23 Score=192.15 Aligned_cols=271 Identities=10% Similarity=0.099 Sum_probs=182.9
Q ss_pred cEEEE-EEcCCeEEEEeCC-CCcc--ccceeeccccccEEEEEeCCCeEEEEecC-CcEEEEEcC--CCCccc-cccccC
Q psy8152 56 SELLI-AYSGQKIKIYDTD-FKNF--NTNTDVSFGEGDIVGVSRYDECILTAVKS-GDVKLWRYK--TEPDQW-TNFNVG 127 (444)
Q Consensus 56 ~~l~~-~~~d~~i~vw~~~-~~~~--~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-g~i~iw~~~--~~~~~~-~~~~~~ 127 (444)
.++++ ++.++.|++|++. ++.. +..+. +.......+++|++++|++++.+ +.|++|++. +++... ......
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD-VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe-cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 44444 4779999999985 3322 22221 22234446778999988888886 999999997 554331 122223
Q ss_pred CCeEEEEEeccCCEEEEeeC-CCeEEEEEcC---CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152 128 PQLECMKHNKHSNIIATGGK-ENDLKLWDLN---TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA 203 (444)
Q Consensus 128 ~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 203 (444)
..+.+++|+|++++|++++. ++.|.+|++. ..+.+..+.... .+.+++|+|++++|+
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~ 144 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD-------------------GCHSANISPDNRTLW 144 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT-------------------TBCCCEECTTSSEEE
T ss_pred CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC-------------------CceEEEECCCCCEEE
Confidence 47899999999998876664 8899999994 334444433332 388899999998888
Q ss_pred EEe-CCceEEEEEcCCCCCccceE--EEeC-CCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCC-Ccc--eeEec---
Q psy8152 204 VCS-KQGYVRVYDPKITTQRRPVL--KVDI-PDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGK-GKP--CYKYK--- 272 (444)
Q Consensus 204 ~~~-~d~~i~i~d~~~~~~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~-~~~--~~~~~--- 272 (444)
+++ .++.|++|++........+. .+.. ....+..++|+|++++|++ +..++.|++|++... ++. +..+.
T Consensus 145 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 145 VPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred EecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC
Confidence 776 89999999998112222222 2333 3446788999999997765 558899999999531 322 22222
Q ss_pred -cc--cCceeEEEecCCCCEEEEE-ECCCcEEEEEcC--C--CceEEEeecCCceeEEEEcCCCcccccchhhhhccccc
Q psy8152 273 -GF--AGCVKDIACPLNENLILSV-SLDRHFRVHDFH--S--KKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEE 344 (444)
Q Consensus 273 -~h--~~~i~~~~~s~~~~~l~s~-~~dg~i~vw~~~--~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~ 344 (444)
++ ...+..++|+|++++|+++ ..++.|++|++. + .+.+..+.....+.+++|+++ +++++.++
T Consensus 225 ~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~~~ 295 (343)
T 1ri6_A 225 ENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHS---------GKYLIAAG 295 (343)
T ss_dssp TTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTT---------SSEEEEEC
T ss_pred ccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCC---------CCEEEEec
Confidence 11 2356689999999877754 478999999998 3 344444544455888888754 45555554
Q ss_pred -cCCCccccCCC
Q psy8152 345 -KGDSDEKYDPE 355 (444)
Q Consensus 345 -~d~~i~~W~~~ 355 (444)
.++.+.+|++.
T Consensus 296 ~~~~~v~v~~~d 307 (343)
T 1ri6_A 296 QKSHHISVYEIV 307 (343)
T ss_dssp TTTCEEEEEEEE
T ss_pred CCCCeEEEEEEc
Confidence 68999999554
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=6.8e-24 Score=221.47 Aligned_cols=278 Identities=14% Similarity=0.041 Sum_probs=213.9
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-CccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP 118 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 118 (444)
+|...+.++.|+ ++ .++++++.++.++||.+.. +.....+..+ ......+++|+|++|+++ .++.|++|++...+
T Consensus 201 ~~~~~v~~~~~s-~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~-~~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~ 276 (1045)
T 1k32_A 201 DMSTHVSSPVIV-GH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSF-TDYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK 276 (1045)
T ss_dssp CCSSCCEEEEEE-TT-EEEEEECTTSSCEEEEEETTSCSCEECCCC-CSSCEEEEEESSSCEEEE-ETTEEEEECTTTCC
T ss_pred CCCCcccceEEe-CC-EEEEEEeccCceEEEEEeCCCCcceEecCC-CCcceeeEcCCCCEEEEE-eCCEEEEecCCceE
Confidence 688899999999 55 6667788889999998653 3333333221 134466889999999887 58899999985433
Q ss_pred ccccccc-----------cCCCeEEEEEe-ccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccC
Q psy8152 119 DQWTNFN-----------VGPQLECMKHN-KHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRR 186 (444)
Q Consensus 119 ~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (444)
.. .+.. |...+.+++|+ |++++|++++ ++.|.+|++..+.... +..+..
T Consensus 277 l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~---------------- 337 (1045)
T 1k32_A 277 IE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLR---------------- 337 (1045)
T ss_dssp EE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSC----------------
T ss_pred ee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCc----------------
Confidence 32 2222 34478999999 9999999888 7899999998776443 222211
Q ss_pred ccceeEEEEecCCCEEEEEeCCceEE-EEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC
Q psy8152 187 PVWVNGISFLPNSDKVAVCSKQGYVR-VYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG 265 (444)
Q Consensus 187 ~~~i~~~~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 265 (444)
..+..++|+ +++.|++++.++.+. +|++. ... ...+..|...+..++|+|+|++|++++.++.|++||+.+ +
T Consensus 338 -~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~---~~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g 410 (1045)
T 1k32_A 338 -IRYVRRGGD-TKVAFIHGTREGDFLGIYDYR---TGK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-G 410 (1045)
T ss_dssp -EEEEEECSS-SEEEEEEEETTEEEEEEEETT---TCC-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-C
T ss_pred -ceEEeeeEc-CCCeEEEEECCCceEEEEECC---CCC-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-C
Confidence 148899999 999999988888898 99988 332 333447778899999999999999999999999999998 8
Q ss_pred cceeEeccccCceeEEEecCCCCEEEEEECCC----------cEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccch
Q psy8152 266 KPCYKYKGFAGCVKDIACPLNENLILSVSLDR----------HFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETK 335 (444)
Q Consensus 266 ~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg----------~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 335 (444)
+....+.+|...+.+++|+|+|++|++++.++ .|++|++.+++......+...+..++|+ |
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~s---------p 481 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFD---------A 481 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEEC---------T
T ss_pred ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEc---------C
Confidence 88877778999999999999999998887654 8999999998844333466677777776 4
Q ss_pred hhhhccccccCCCccccCCCc
Q psy8152 336 KEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 336 ~~~~~~s~~~d~~i~~W~~~~ 356 (444)
++++++..+.++..++|+...
T Consensus 482 dG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 482 DSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp TSCEEEEEESCCCCCEECSSS
T ss_pred CCCEEEEEecccCCcCcchhc
Confidence 467788888888888887653
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.2e-24 Score=216.00 Aligned_cols=298 Identities=8% Similarity=0.006 Sum_probs=200.6
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCccc---ceEEEeeeccCCcEEEEEEcC---------CeEEEEeC
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA---SVLALNWGNVEESELLIAYSG---------QKIKIYDT 72 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~~~~~d---------~~i~vw~~ 72 (444)
++.++++ +.+|.|++|++.+++.. ..+. .|.. .|.+++|| |++++|++++.+ +.|++|++
T Consensus 27 dg~~~~~-~~dg~i~~~d~~~g~~~----~~~~--~~~~~~~~v~~~~~S-pDg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 27 DTEFIYR-EQKGTVRLWNVETNTST----VLIE--GKKIESLRAIRYEIS-PDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp SSCBCCC-CSSSCEEEBCGGGCCCE----EEEC--TTTTTTTTCSEEEEC-TTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred CCcEEEE-eCCCCEEEEECCCCcEE----EEec--cccccccccceEEEC-CCCCEEEEEecCccceeecceeeEEEEEC
Confidence 4455554 78999999999988741 1222 3443 49999999 799999998764 78889999
Q ss_pred CCCccccceeecccc--ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCC------------------eEE
Q psy8152 73 DFKNFNTNTDVSFGE--GDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQ------------------LEC 132 (444)
Q Consensus 73 ~~~~~~~~~~~~~~~--~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~------------------v~~ 132 (444)
.+++.........|. ....+++|+|++|++++. +.|++|++.+++.......+... +.+
T Consensus 99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred CCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 988763222212232 233567999999999876 79999999988776534433333 378
Q ss_pred EEEeccCCEEEEeeCCC----------------------------------eEEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152 133 MKHNKHSNIIATGGKEN----------------------------------DLKLWDLNTTKNIFSAKNVSHRVLVYSVK 178 (444)
Q Consensus 133 ~~~~~~~~~l~~~~~d~----------------------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (444)
++|+|+|+.|++++.++ .|++||+.+++....+..+..
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~-------- 249 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD-------- 249 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC--------
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc--------
Confidence 99999999999987553 688888877665444433210
Q ss_pred CCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCccceEEEeC-CCCCe----eEEEEccCCCEEEE
Q psy8152 179 PDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRRPVLKVDI-PDVAL----SCITTTNQSHYVIV 249 (444)
Q Consensus 179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~-~~~~i----~~~~~~~~~~~l~~ 249 (444)
.......+.+++|+|+|++|++... +..|++||+. .++....+.. +...+ ..++|+|+|+.|+.
T Consensus 250 ----~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 322 (723)
T 1xfd_A 250 ----PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT---TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFF 322 (723)
T ss_dssp ----GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT---TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEE
T ss_pred ----CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC---CCcceEEEEeccCCEEeccCCCceEcCCCCeEEE
Confidence 0001225899999999998876643 4689999998 4444433322 23333 37899999997765
Q ss_pred --EcCCC------cEEEEEcCCCCcc---eeEeccccCceeE-EEecCCCCEEEEEECC---CcEEEEEcCCCc--eEEE
Q psy8152 250 --GSTTG------DMMAVDLRGKGKP---CYKYKGFAGCVKD-IACPLNENLILSVSLD---RHFRVHDFHSKK--LLRK 312 (444)
Q Consensus 250 --~~~dg------~i~iwd~~~~~~~---~~~~~~h~~~i~~-~~~s~~~~~l~s~~~d---g~i~vw~~~~~~--~~~~ 312 (444)
+..++ .|++||+.. +.. ...+..+...+.. ++|+|++++|+..+.+ +.++||++.... ....
T Consensus 323 ~~~~~~~~~~~~~~l~~~d~~~-~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 401 (723)
T 1xfd_A 323 IRAIPQGGRGKFYHITVSSSQP-NSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQC 401 (723)
T ss_dssp EEEECCSSSSCEEEEEEECSSC-CSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBC
T ss_pred EEecccCCCcceeEEEEEeccC-CCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcce
Confidence 44566 577777333 333 5556544444554 6999999998876655 789999986532 2222
Q ss_pred ee----cCCceeEEEEcCC
Q psy8152 313 DY----MQSRLTSILVRSD 327 (444)
Q Consensus 313 ~~----~~~~i~~~~~~~~ 327 (444)
+. +...+..++|+++
T Consensus 402 l~~~~~~~~~~~~~~~spd 420 (723)
T 1xfd_A 402 LSCDLVENCTYFSASFSHS 420 (723)
T ss_dssp SSTTSSSSCCCCEEEECTT
T ss_pred ecccccCCCCeEEEEECCC
Confidence 32 3556788888865
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=1.2e-23 Score=211.24 Aligned_cols=274 Identities=11% Similarity=0.115 Sum_probs=198.5
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-----Cccccce
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-----KNFNTNT 81 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-----~~~~~~~ 81 (444)
..++.+ .++.|++|++.+++. ..+. .+...+.+++|+ |++++|+++ .++.|++|++.+ ++.....
T Consensus 93 ~~~~~~-~~~~i~~~d~~~~~~-----~~l~--~~~~~~~~~~~S-pdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 93 GLVVLF-TQGGLVGFDMLARKV-----TYLF--DTNEETASLDFS-PVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp TEEEEE-ETTEEEEEETTTTEE-----EEEE--CCTTCCTTCEEC-TTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC
T ss_pred CeEEEE-ECCEEEEEECCCCce-----EEcc--CCcccccCCcCC-CCCCEEEEE-ECCeEEEEecCcccccCCCcEEec
Confidence 344444 459999999988762 2222 456778999999 799999985 679999999988 7765543
Q ss_pred eecccc--------------ccEEEEEeCCCeEEEEe---------------------------------cCCcEEEEEc
Q psy8152 82 DVSFGE--------------GDIVGVSRYDECILTAV---------------------------------KSGDVKLWRY 114 (444)
Q Consensus 82 ~~~~~~--------------~~v~~~s~~~~~l~~~~---------------------------------~dg~i~iw~~ 114 (444)
...... .....++|+|++|++++ .+..|++||+
T Consensus 163 ~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~ 242 (706)
T 2z3z_A 163 IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL 242 (706)
T ss_dssp SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET
T ss_pred cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC
Confidence 321111 24567899999999987 4467999999
Q ss_pred CCCCcccccc--ccCCCeEEEEEeccCCEEEEeeCCC-----eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152 115 KTEPDQWTNF--NVGPQLECMKHNKHSNIIATGGKEN-----DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP 187 (444)
Q Consensus 115 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (444)
.+++...... .|...+.+++|+|+++.|++++.++ .|++||+.+++....+..... + ...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~--------~-----~~~ 309 (706)
T 2z3z_A 243 ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD--------K-----HYV 309 (706)
T ss_dssp TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC--------S-----SCC
T ss_pred CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC--------C-----CeE
Confidence 9887654332 4667899999999999999987775 899999998843333321111 0 000
Q ss_pred cceeEEEEec--CCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeE-EEEccCCCEEEEE-cCCC----cEEEE
Q psy8152 188 VWVNGISFLP--NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSC-ITTTNQSHYVIVG-STTG----DMMAV 259 (444)
Q Consensus 188 ~~i~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~-~~dg----~i~iw 259 (444)
..+.+++|+| ++++|+++..++.++||.+. .....+..+..+...+.. ++|+|+++.|+.+ +.++ .|+.|
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~--~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD--TTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEE--TTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEE--CCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 0246789999 99999999999999999876 234556666777777776 7999999887664 4444 67777
Q ss_pred EcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC----CcEEEEEcCCCc
Q psy8152 260 DLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD----RHFRVHDFHSKK 308 (444)
Q Consensus 260 d~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d----g~i~vw~~~~~~ 308 (444)
++.+ +. +..+. |...+.+++|+|++++|+..+.+ +.|++|++.+++
T Consensus 388 d~~~-~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 388 DIKG-GK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ETTC-CC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EcCC-CC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 7776 54 44444 66779999999999988876544 569999998876
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=4.4e-23 Score=189.07 Aligned_cols=264 Identities=10% Similarity=0.075 Sum_probs=198.3
Q ss_pred CcccEEEecC-------CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEE-EcCCeEEEEeCCCCc
Q psy8152 5 DDYNIYIGSS-------TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIA-YSGQKIKIYDTDFKN 76 (444)
Q Consensus 5 ~~~~l~~g~~-------dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~~ 76 (444)
+++.|++++. ++.|.+|+..+++. . ..+. ....+.+++|+ +++++++++ ..++.|.+||+.+++
T Consensus 51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~-~---~~~~---~~~~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~ 122 (353)
T 3vgz_A 51 QENALWLATSQSRKLDKGGVVYRLDPVTLEV-T---QAIH---NDLKPFGATIN-NTTQTLWFGNTVNSAVTAIDAKTGE 122 (353)
T ss_dssp TTTEEEEEECCCTTTEESEEEEEECTTTCCE-E---EEEE---ESSCCCSEEEE-TTTTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCEEEEEcCCCcCCCCCccEEEEcCCCCeE-E---EEEe---cCCCcceEEEC-CCCCEEEEEecCCCEEEEEeCCCCe
Confidence 4456666663 56899999988764 1 2222 23457889999 788866554 557999999999999
Q ss_pred cccceeecccc---------ccEEEEEeCCCeEEEEe--cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEe
Q psy8152 77 FNTNTDVSFGE---------GDIVGVSRYDECILTAV--KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATG 145 (444)
Q Consensus 77 ~~~~~~~~~~~---------~~v~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 145 (444)
.+..+...... ..-..++|+++++++++ .++.|.+||+.+++.+..+..+...+.+++|+|++++|+++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 123 VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEE
T ss_pred eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEE
Confidence 88777643211 23356789999877776 47889999999988876444466678999999999999999
Q ss_pred eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEEcCCCCCccc
Q psy8152 146 GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYDPKITTQRRP 224 (444)
Q Consensus 146 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~ 224 (444)
+.++.|.+||+.+++.+..+..... .....+.+++|+|++++|++++. ++.|.+||+. ..+.
T Consensus 203 ~~~~~i~~~d~~~~~~~~~~~~~~~--------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~---~~~~ 265 (353)
T 3vgz_A 203 NADGELITIDTADNKILSRKKLLDD--------------GKEHFFINISLDTARQRAFITDSKAAEVLVVDTR---NGNI 265 (353)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCCS--------------SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT---TCCE
T ss_pred cCCCeEEEEECCCCeEEEEEEcCCC--------------CCCcccceEEECCCCCEEEEEeCCCCEEEEEECC---CCcE
Confidence 9999999999999888776654111 01125788999999987766654 5999999998 6666
Q ss_pred eEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152 225 VLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDR 297 (444)
Q Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg 297 (444)
+..+.... ...++|+|+++++++ ...++.|.+||+.+ ++.+..+..+ ..+.+++|+|++++|+++...+
T Consensus 266 ~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 266 LAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS-YKVVKTFDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT-TEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC-CeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 66666443 257999999996655 44789999999999 8888888753 4678999999999777766553
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=2.2e-24 Score=217.16 Aligned_cols=295 Identities=8% Similarity=0.003 Sum_probs=199.4
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecccc-----ccEEEEEeCCCeEEEEecC---------Cc
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGE-----GDIVGVSRYDECILTAVKS---------GD 108 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-----~~v~~~s~~~~~l~~~~~d---------g~ 108 (444)
..+.+++|+ |+++++++ +.||+|++|++.+++....+. .|. ..-.+|+|+|++|++++.+ +.
T Consensus 17 ~~~~~~~~s-pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~--~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 17 IHDPEAKWI-SDTEFIYR-EQKGTVRLWNVETNTSTVLIE--GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCCBS-SSSCBCCC-CSSSCEEEBCGGGCCCEEEEC--TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred ccccccEEc-CCCcEEEE-eCCCCEEEEECCCCcEEEEec--cccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 457889999 78987766 788999999999998776654 333 3456789999999998764 78
Q ss_pred EEEEEcCCCCccc--cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcc-ccc
Q psy8152 109 VKLWRYKTEPDQW--TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEF-DLR 185 (444)
Q Consensus 109 i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (444)
|++||+.+++... ....|...+..++|+|+|+.|++++. +.|++|++.+++.......+...+.... .++.. ...
T Consensus 93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g-~~~~v~~ee 170 (723)
T 1xfd_A 93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNG-LSDWLYEEE 170 (723)
T ss_dssp EEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEE-ECCHHHHHT
T ss_pred EEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECc-ccceeEEEE
Confidence 8899999887632 12234555899999999999999886 7999999998776554433222000000 00000 000
Q ss_pred CccceeEEEEecCCCEEEEEeCCc----------------------------------eEEEEEcCCCCCccceEEEeCC
Q psy8152 186 RPVWVNGISFLPNSDKVAVCSKQG----------------------------------YVRVYDPKITTQRRPVLKVDIP 231 (444)
Q Consensus 186 ~~~~i~~~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~~~~~~~~ 231 (444)
....+.+++|+|+|++|++++.++ .|++||+. .......+..+
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~---~~~~~~~l~~~ 247 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN---GPTHDLEMMPP 247 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS---SSCCCEECCCC
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC---CCceeEEeeCC
Confidence 001247899999999999887543 89999998 44444445443
Q ss_pred ------CCCeeEEEEccCCCEEEEEcC----CCcEEEEEcCCCCcceeEecc-ccCce----eEEEecCCCCEEEE--EE
Q psy8152 232 ------DVALSCITTTNQSHYVIVGST----TGDMMAVDLRGKGKPCYKYKG-FAGCV----KDIACPLNENLILS--VS 294 (444)
Q Consensus 232 ------~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~-h~~~i----~~~~~s~~~~~l~s--~~ 294 (444)
...+..++|+|+|++|++... +..|++||+.+ +++...+.. +...+ ..++|+|+|+.|+. +.
T Consensus 248 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 326 (723)
T 1xfd_A 248 DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT-GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI 326 (723)
T ss_dssp CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT-CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE
T ss_pred ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC-CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEec
Confidence 557889999999998877543 35799999998 877666553 33444 37899999997765 45
Q ss_pred CCC------cEEEEE-cCCCce--EEEee-cCCceeE-EEEcCCCcccccchhhhhcccc-ccC--CCccccCCCc
Q psy8152 295 LDR------HFRVHD-FHSKKL--LRKDY-MQSRLTS-ILVRSDFSLENETKKEEQEHSE-EKG--DSDEKYDPEH 356 (444)
Q Consensus 295 ~dg------~i~vw~-~~~~~~--~~~~~-~~~~i~~-~~~~~~~~~~~~~~~~~~~~s~-~~d--~~i~~W~~~~ 356 (444)
.++ .|++|+ ..+++. ...+. ....+.. ++|+ |+++.++.. ..+ +.++||.+..
T Consensus 327 ~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s---------pdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 327 PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD---------EKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE---------TTTTEEEEEESSSCTTCCEEEEECS
T ss_pred ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc---------CCCCEEEEEEcCCCCcceEEEEEeC
Confidence 666 577777 444441 33333 2333443 4666 445666544 444 7899998763
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=2.9e-22 Score=183.31 Aligned_cols=297 Identities=10% Similarity=-0.013 Sum_probs=193.3
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEE-EEcCCeEEEEeCCCCcccccee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLI-AYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
.++..+++++.++.|++|++.+++. ...+.. +....+..++|+ |+++++++ +..++.|++|++.+++....+.
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~----~~~~~~-~~~~~~~~~~~s-~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTV----YKSCVM-PDKFGPGTAMMA-PDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEE----EEEEEC-SSCCSSCEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcE----EEEEec-CCCCCCceeEEC-CCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 4567788889999999999988764 122221 222257899999 78886654 4568999999999888877665
Q ss_pred eccc------cccEEEEEeCCCeEEEEecC------------CcEEEEEcCCCCccc--cccccCCCeEEEEEeccCCEE
Q psy8152 83 VSFG------EGDIVGVSRYDECILTAVKS------------GDVKLWRYKTEPDQW--TNFNVGPQLECMKHNKHSNII 142 (444)
Q Consensus 83 ~~~~------~~~v~~~s~~~~~l~~~~~d------------g~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l 142 (444)
.... ...-.+++|++++|++++.+ +.|.+||+.+++... ....+...+.+++|+|+++ +
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-L 161 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-E
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-E
Confidence 3221 13446789999999988865 899999998854432 2334555789999999998 5
Q ss_pred EEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCc-------ccccCccceeEEEEecCCCEEEEEe-CCceEEEE
Q psy8152 143 ATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDE-------FDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVY 214 (444)
Q Consensus 143 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~ 214 (444)
++++. .|.+||+.+++.+..+........ ....|+. ...........+++++++....... ....+..+
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRK-GYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCT-TBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCc-cccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 55543 499999999887766543321000 0000000 0000001244566665542111000 01111224
Q ss_pred EcCCCCCccceEEEeCCCCCeeEEEEcc-CCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE
Q psy8152 215 DPKITTQRRPVLKVDIPDVALSCITTTN-QSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV 293 (444)
Q Consensus 215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~ 293 (444)
+.. +. ......+..+...+..++|+| ++++|+++ ++.|++||+.+ ++.+..+.. ...+.+++|+|++++|+++
T Consensus 239 ~~~-~~-~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 239 DLK-TG-KTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp ETT-TC-CEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECSSSSCEEEE
T ss_pred ecc-CC-cEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc-CeEEEEEcC-CCCccceEECCCCCEEEEe
Confidence 443 11 111122223455688999999 99999988 88999999999 888887763 3457799999999988888
Q ss_pred ECCCcEEEEEcCCCceEEEeecC
Q psy8152 294 SLDRHFRVHDFHSKKLLRKDYMQ 316 (444)
Q Consensus 294 ~~dg~i~vw~~~~~~~~~~~~~~ 316 (444)
+.++.|++||+.+++.+..+...
T Consensus 313 ~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 313 GTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SBSSEEEEEETTTTEEEEEEECS
T ss_pred cCCCeEEEEeccccceeeeeecC
Confidence 88999999999999888776543
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=6e-23 Score=201.30 Aligned_cols=268 Identities=12% Similarity=-0.021 Sum_probs=191.4
Q ss_pred cccceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCccccceeecccc-ccEEEE--EeCCCeEEEEec---CCcEEEEE
Q psy8152 41 NKASVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNFNTNTDVSFGE-GDIVGV--SRYDECILTAVK---SGDVKLWR 113 (444)
Q Consensus 41 h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~--s~~~~~l~~~~~---dg~i~iw~ 113 (444)
+..+|++++|+ |++++||+++. +|+++||++.+++..... .+. ..+..+ +|+ +++++++. +...++|.
T Consensus 20 ~~~~~~~~~~~-~DG~~la~~s~~~g~~~lw~~~~g~~~~lt---~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 20 IAVEKYSLQGV-VDGDKLLVVGFSEGSVNAYLYDGGETVKLN---REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHSCEEEEEEE-ETTTEEEEEEEETTEEEEEEEETTEEEECC---SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred hccchheeecC-CCCCeEEEEEccCCceeEEEEcCCCcEeee---cccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 35689999999 79999999887 999999999766654433 233 345444 667 66776665 45566665
Q ss_pred cCC---CCccccccccCCCeEEEEEeccCCE-EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152 114 YKT---EPDQWTNFNVGPQLECMKHNKHSNI-IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW 189 (444)
Q Consensus 114 ~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (444)
+.. +... .+.. ...+...+|+|+++. +++.+.++.+.+||+.+++....... .
T Consensus 95 ~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~--~------------------- 151 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL--P------------------- 151 (582)
T ss_dssp EETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE--S-------------------
T ss_pred EeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC--C-------------------
Confidence 543 2222 2222 223456788887753 33333444556999988765443321 1
Q ss_pred eeEEEEecCCCEEEEEeCC----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC--cEEEEEcCC
Q psy8152 190 VNGISFLPNSDKVAVCSKQ----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG--DMMAVDLRG 263 (444)
Q Consensus 190 i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~ 263 (444)
..+++|+|+|++|++++.+ +.|++||+. .... ..+..+...+..++|+|+|++|+++..++ .|++||+.+
T Consensus 152 ~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~---~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 152 GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS---SGGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp SCEEEEEEETTEEEEEEEEETTEEEEEEEETT---TCCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred CceEEECCCCCEEEEEEEcCCCCeEEEEEcCC---CCCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 2678999999999988777 789999988 3333 35677888899999999999999888888 899999998
Q ss_pred CCcceeEeccccCceeEEE--------ecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccch
Q psy8152 264 KGKPCYKYKGFAGCVKDIA--------CPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETK 335 (444)
Q Consensus 264 ~~~~~~~~~~h~~~i~~~~--------~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 335 (444)
+++. .+.+|...+..++ |+|+|.++++++.++++++|++ ++++. ...+.+.+++|+ +
T Consensus 228 -~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-d-------- 292 (582)
T 3o4h_A 228 -GSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-R-------- 292 (582)
T ss_dssp -CCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-T--------
T ss_pred -CcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-C--------
Confidence 7777 7777877777777 9999999999999999999999 66544 334667778776 3
Q ss_pred hhhhccccccCC---CccccCCCc
Q psy8152 336 KEEQEHSEEKGD---SDEKYDPEH 356 (444)
Q Consensus 336 ~~~~~~s~~~d~---~i~~W~~~~ 356 (444)
+..+++++.+. .+.+|+...
T Consensus 293 -g~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 293 -GKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp -TEEEEEEEETTEEEEEEEETTCC
T ss_pred -CEEEEEEcCCCCCCeEEEEcCCC
Confidence 24556555553 366666553
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.9e-21 Score=177.91 Aligned_cols=287 Identities=11% Similarity=0.116 Sum_probs=183.6
Q ss_pred EEEEEE----cCCeEEEEeCC--CCccccce-eeccccccEEEEEeCCCeEEEEec---CCcEEEEEcCCCCcc--cccc
Q psy8152 57 ELLIAY----SGQKIKIYDTD--FKNFNTNT-DVSFGEGDIVGVSRYDECILTAVK---SGDVKLWRYKTEPDQ--WTNF 124 (444)
Q Consensus 57 ~l~~~~----~d~~i~vw~~~--~~~~~~~~-~~~~~~~~v~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~--~~~~ 124 (444)
.|++|+ .++.|++|.+. +++..... ..........+++|+++ |++++. ++.|++|++.++... ....
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence 445553 24567777664 45543321 11222344477899999 555544 689999999776532 2334
Q ss_pred ccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCC-ce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152 125 NVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNT-TK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD 200 (444)
Q Consensus 125 ~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 200 (444)
.+...+..++|+|++++|++++ .++.|.+|++.. +. .+..+..... .|. .......+.+++|+|+++
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-------~p~--~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH-------GPR--PEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC-------CSS--TTCSSCCEEEEEECTTSC
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC-------CCC--ccccCCCceEEEECCCCc
Confidence 4677889999999999888887 689999999963 22 2222211110 000 001122488999999999
Q ss_pred EEEEEeCCceEEEEEcCCCCCccceEEEeCC-CCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCC-Ccc--eeEecccc
Q psy8152 201 KVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-DVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGK-GKP--CYKYKGFA 275 (444)
Q Consensus 201 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~-~~~--~~~~~~h~ 275 (444)
++++...++.|++|++...+....+..+..+ ...+..++|+|+|++|++ +..++.|++|++... ++. +..+....
T Consensus 154 l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 233 (347)
T 3hfq_A 154 LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIP 233 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSC
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecC
Confidence 7777777899999999821222222333332 335778999999996665 667889999998741 332 22333222
Q ss_pred ------CceeEEEecCCCCEE-EEEECCCcEEEEEcCC-C--ceEEEee-cCCceeEEEEcCCCcccccchhhhhccccc
Q psy8152 276 ------GCVKDIACPLNENLI-LSVSLDRHFRVHDFHS-K--KLLRKDY-MQSRLTSILVRSDFSLENETKKEEQEHSEE 344 (444)
Q Consensus 276 ------~~i~~~~~s~~~~~l-~s~~~dg~i~vw~~~~-~--~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~ 344 (444)
..+..++|+|+|++| ++...++.|.+|++.. + +.+..+. +...+..++|+++ ++++++++
T Consensus 234 ~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spd---------g~~l~v~~ 304 (347)
T 3hfq_A 234 ADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPT---------EAFVVVVN 304 (347)
T ss_dssp TTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTT---------SSEEEEEE
T ss_pred CCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCC---------CCEEEEEE
Confidence 358889999999977 4556689999999973 2 3333443 3456788888754 56565555
Q ss_pred -cCCCcccc--CCCccccccc
Q psy8152 345 -KGDSDEKY--DPEHFEMNQV 362 (444)
Q Consensus 345 -~d~~i~~W--~~~~~~~~~~ 362 (444)
.++.+.+| +..++++..+
T Consensus 305 ~~~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 305 QNTDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp TTTTEEEEEEECTTTCCEEEE
T ss_pred cCCCcEEEEEEeCCCCeEEec
Confidence 45899999 5555555443
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=4e-22 Score=182.35 Aligned_cols=280 Identities=9% Similarity=0.071 Sum_probs=189.0
Q ss_pred EEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCcccccc
Q psy8152 47 ALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNF 124 (444)
Q Consensus 47 ~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~ 124 (444)
.++++ +++.++++++.++.|++||+.+++.+..+..... .....+++|++++++ ++..++.|.+|++.+++.+..+.
T Consensus 4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 45677 6888999999999999999999988877764321 244567789998654 55568999999999887765333
Q ss_pred cc------CCCeEEEEEeccCCEEEEeeCC------------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccC
Q psy8152 125 NV------GPQLECMKHNKHSNIIATGGKE------------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRR 186 (444)
Q Consensus 125 ~~------~~~v~~~~~~~~~~~l~~~~~d------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (444)
.. ...+.+++|+|++++|++++.+ +.|.+||+.+++....+.....
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---------------- 146 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM---------------- 146 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC----------------
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC----------------
Confidence 22 2237899999999999998865 8999999988543322111111
Q ss_pred ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC------------------------CeeEEEEcc
Q psy8152 187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV------------------------ALSCITTTN 242 (444)
Q Consensus 187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~------------------------~i~~~~~~~ 242 (444)
+..+.+++|+|+++ +++++. .|++||+. ..+.+..+..+.. ....+++++
T Consensus 147 ~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (349)
T 1jmx_B 147 PRQVYLMRAADDGS-LYVAGP--DIYKMDVK---TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 220 (349)
T ss_dssp CSSCCCEEECTTSC-EEEESS--SEEEECTT---TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred CCcccceeECCCCc-EEEccC--cEEEEeCC---CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC
Confidence 11488899999999 555544 49999998 5555555543320 233456665
Q ss_pred CCCEEEEEcCCC-cEEEEEcCCCCcc-eeEeccccCceeEEEecC-CCCEEEEEECCCcEEEEEcCCCceEEEeecCCce
Q psy8152 243 QSHYVIVGSTTG-DMMAVDLRGKGKP-CYKYKGFAGCVKDIACPL-NENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRL 319 (444)
Q Consensus 243 ~~~~l~~~~~dg-~i~iwd~~~~~~~-~~~~~~h~~~i~~~~~s~-~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i 319 (444)
++.......... .+..+++.+ ++. +..+..+...+..++|+| ++++|+++ ++.|++||+.+++.+..+.....+
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~ 297 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKT-GKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTY 297 (349)
T ss_dssp ------CCCEEEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCC
T ss_pred CCcCCccccccceeEEEEeccC-CcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCc
Confidence 432111000001 112244443 221 111223456788999999 99999888 889999999999998888777778
Q ss_pred eEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152 320 TSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ 361 (444)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~ 361 (444)
.+++|+++ ++++++++.++.|++|+....+...
T Consensus 298 ~~~~~s~d---------g~~l~~~~~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 298 YCVAFDKK---------GDKLYLGGTFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp CEEEECSS---------SSCEEEESBSSEEEEEETTTTEEEE
T ss_pred cceEECCC---------CCEEEEecCCCeEEEEeccccceee
Confidence 88888755 4566667788999999998766443
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=1.9e-21 Score=179.15 Aligned_cols=278 Identities=12% Similarity=0.080 Sum_probs=187.1
Q ss_pred ccEEEecCC--CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC-CCccccceee
Q psy8152 7 YNIYIGSST--GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD-FKNFNTNTDV 83 (444)
Q Consensus 7 ~~l~~g~~d--g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~-~~~~~~~~~~ 83 (444)
..|++|+.. +.|++|.+.........+.... ..+...+..++|+ |++++|++++.+ .|.+|++. +++.......
T Consensus 3 ~~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~-~~~~~~~~~~a~s-pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~ 79 (365)
T 1jof_A 3 HHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTE-IPQDEPISWMTFD-HERKNIYGAAMK-KWSSFAVKSPTEIVHEASH 79 (365)
T ss_dssp EEEEEEESSSSCEEEEEEEETTTTEEEEEEEEE-CCTTCCCSEEEEC-TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEccCCCcEEEEEEECCCCCEEEeeEEc-cCCCCCCcEEEEC-CCCCEEEEEccc-eEEEEEECCCCCEEEeeEe
Confidence 467788764 5688887743221122222111 1234578899999 799999999887 99999997 6766543332
Q ss_pred cc-ccccEEEEEeCCCe--EEEEe-------------cCCcEEEEEcC-CCCcccccc----ccCCCeEEEEEeccCCEE
Q psy8152 84 SF-GEGDIVGVSRYDEC--ILTAV-------------KSGDVKLWRYK-TEPDQWTNF----NVGPQLECMKHNKHSNII 142 (444)
Q Consensus 84 ~~-~~~~v~~~s~~~~~--l~~~~-------------~dg~i~iw~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l 142 (444)
.. ......+++|+|++ ++++. .++.+.+|++. .++...... .+...+.+++|+|+|++|
T Consensus 80 ~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l 159 (365)
T 1jof_A 80 PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL 159 (365)
T ss_dssp ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred ecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE
Confidence 11 11222456889984 44543 68899999997 455432222 245679999999999988
Q ss_pred EEeeC-CCeEEEEEcC-Cceee--eeeec--ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-CceEEEEE
Q psy8152 143 ATGGK-ENDLKLWDLN-TTKNI--FSAKN--VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-QGYVRVYD 215 (444)
Q Consensus 143 ~~~~~-d~~i~vwd~~-~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i~d 215 (444)
+++.. ++.|++|++. +++.. ..+.. +.. .+..++|+|+|++|++++. ++.|.+|+
T Consensus 160 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~------------------~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 160 YSADLTANKLWTHRKLASGEVELVGSVDAPDPGD------------------HPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC------------------CEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC------------------CCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 87654 6799999998 66543 22221 122 4889999999998887764 78999998
Q ss_pred cCCCCCccce---EEEe---C----CCC------CeeEEE-EccCCCEEEEEcCCC------cEEEEEcC-CCCccee--
Q psy8152 216 PKITTQRRPV---LKVD---I----PDV------ALSCIT-TTNQSHYVIVGSTTG------DMMAVDLR-GKGKPCY-- 269 (444)
Q Consensus 216 ~~~~~~~~~~---~~~~---~----~~~------~i~~~~-~~~~~~~l~~~~~dg------~i~iwd~~-~~~~~~~-- 269 (444)
+. ...++.. ..+. . +.. .+..++ |+|+|++|+++.... .|.+|++. + ++...
T Consensus 222 ~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~-g~~~~~~ 299 (365)
T 1jof_A 222 ID-PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC-GSIEKQL 299 (365)
T ss_dssp EC-TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT-SCEEEEE
T ss_pred Ee-CCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC-CCEEEee
Confidence 76 1122221 1222 1 121 478899 999999988765432 79999996 4 55443
Q ss_pred -EeccccCceeEEEecC---CCCEEEEEECC-CcEEEEEcCCC
Q psy8152 270 -KYKGFAGCVKDIACPL---NENLILSVSLD-RHFRVHDFHSK 307 (444)
Q Consensus 270 -~~~~h~~~i~~~~~s~---~~~~l~s~~~d-g~i~vw~~~~~ 307 (444)
.+..+...+..++|+| ++++|++++.+ +.|.+|++...
T Consensus 300 ~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 300 FLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2333455567889999 89999998864 89999999766
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=7.3e-22 Score=198.61 Aligned_cols=314 Identities=5% Similarity=-0.051 Sum_probs=205.9
Q ss_pred cEEEecCCCcEEEEEcCCCccceeeeeeecccCccc---ceEEEeeeccCCcEEEEEEc---------CCeEEEEeCCCC
Q psy8152 8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA---SVLALNWGNVEESELLIAYS---------GQKIKIYDTDFK 75 (444)
Q Consensus 8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~~~~~---------d~~i~vw~~~~~ 75 (444)
.++..+.++.|++|++.+++. . ..+. .|.. .|.+++|| |++++|++++. ++.|++|++.++
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~~--~--~~~~--~~~~~~~~~~~~~~S-pDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g 100 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQS--Y--TILS--NRTMKSVNASNYGLS-PDRQFVYLESDYSKLWRYSYTATYYIYDLSNG 100 (719)
T ss_dssp EEEEECTTSCEEEEESSSCCE--E--EEEC--HHHHHTTTCSEEEEC-TTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred eEEEEcCCCCEEEEEcCCCcE--E--EEEc--cccccccceeeEEEC-CCCCeEEEEecCceeEEeecceEEEEEECCCC
Confidence 455555699999999998873 1 1111 2222 38999999 79999998876 789999999988
Q ss_pred ccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccc-cccCCCe-----------------EEEEEec
Q psy8152 76 NFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTN-FNVGPQL-----------------ECMKHNK 137 (444)
Q Consensus 76 ~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~v-----------------~~~~~~~ 137 (444)
+.+....+ .......+++|+|+.|+++. ++.|++|++.+++..... .++...| .+++|+|
T Consensus 101 ~~~~~~~l-~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 101 EFVRGNEL-PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp EECCSSCC-CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred ccccceec-CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 87321221 12344578899999999885 789999999888765422 2232222 4899999
Q ss_pred cCCEEEEeeCCC----------------------------------eEEEEEcCCceee--eee------ecccceeeEe
Q psy8152 138 HSNIIATGGKEN----------------------------------DLKLWDLNTTKNI--FSA------KNVSHRVLVY 175 (444)
Q Consensus 138 ~~~~l~~~~~d~----------------------------------~i~vwd~~~~~~~--~~~------~~~~~~~~~~ 175 (444)
+|++|++++.+. .|++||+.+++.. ..+ ..+.
T Consensus 179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~------ 252 (719)
T 1z68_A 179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD------ 252 (719)
T ss_dssp TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC------
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc------
Confidence 999999988652 6788888876542 111 1222
Q ss_pred eeCCCcccccCccceeEEEEecCCCEEEEEeCC----ceEEEEE----cCCCCCccceEEE----eCCCCCee-----EE
Q psy8152 176 SVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ----GYVRVYD----PKITTQRRPVLKV----DIPDVALS-----CI 238 (444)
Q Consensus 176 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d----~~~~~~~~~~~~~----~~~~~~i~-----~~ 238 (444)
..+.+++|+|+++++++.... ..|.+|| +. .+.....+ ..+...+. .+
T Consensus 253 ------------~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (719)
T 1z68_A 253 ------------YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ---TWDCPKTQEHIEESRTGWAGGFFVSTP 317 (719)
T ss_dssp ------------EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS---SEECCGGGEEEEECSSSCSSSSSCCCC
T ss_pred ------------ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC---CCceEEEEecccccCCceEccccCCcc
Confidence 268999999998776664322 3588999 76 33333222 35666666 88
Q ss_pred EEccCCCEEEE--EcCCC--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC-----CcEEEEEcCC--C
Q psy8152 239 TTTNQSHYVIV--GSTTG--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD-----RHFRVHDFHS--K 307 (444)
Q Consensus 239 ~~~~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~--~ 307 (444)
.|+|+|+.|+. +..+| .|++|++.. ++ ...+..+...+..+.++ +++.|+..+.+ +.+++|.+.. +
T Consensus 318 ~~spdg~~l~~~~~~~~g~~~l~~~~~~~-~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 318 VFSYDAISYYKIFSDKDGYKHIHYIKDTV-EN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EECTTSSCEEEEEECTTSCEEEEEESSCS-TT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EECCCCCeEEEEEEccCCceEEEEEECCC-Cc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 99999986554 44555 567777766 54 55666666678888777 78777766655 7888998754 3
Q ss_pred ce-EEEee-----cCCceeEEEEcCCCcccccchhhhhcc-ccccC--CCccccCCCcccccccc
Q psy8152 308 KL-LRKDY-----MQSRLTSILVRSDFSLENETKKEEQEH-SEEKG--DSDEKYDPEHFEMNQVT 363 (444)
Q Consensus 308 ~~-~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~-s~~~d--~~i~~W~~~~~~~~~~~ 363 (444)
.. ...+. +...+..+.|+++ +++++ +.+.. ..+.+|++..++..++.
T Consensus 395 ~~~~~~l~~~~~~~~~~~~~~~~s~d---------g~~l~~~~s~~~~p~~~l~d~~~g~~~~~~ 450 (719)
T 1z68_A 395 PPSKKCVTCHLRKERCQYYTASFSDY---------AKYYALVCYGPGIPISTLHDGRTDQEIKIL 450 (719)
T ss_dssp SCCEEESSTTTTTTTBCBEEEEECGG---------GSSEEEEECCBSSCEEEEECSSSCCEEEEE
T ss_pred CCCceeccCccCCCCCceEEEEECCC---------CCEEEEEcCCCCCCeEEEEECCCCCEEEEe
Confidence 21 22222 2345666777643 33333 22222 45778887666544333
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=2.7e-22 Score=188.37 Aligned_cols=212 Identities=14% Similarity=0.106 Sum_probs=160.4
Q ss_pred CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc----------c-----ccccccCCC
Q psy8152 65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD----------Q-----WTNFNVGPQ 129 (444)
Q Consensus 65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~----------~-----~~~~~~~~~ 129 (444)
+.+++|+... . + +......+++++.+.++++++.++ +++|+...... . .....+...
T Consensus 23 ~~vri~~~~~-~----~--~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-E----L--PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-S----C--CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-c----c--CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 5688886431 1 1 233566788899999999998887 89987532100 0 012335677
Q ss_pred eEEEEEeccCCEEE----EeeCCCeEEEEEcCCc--------ee---eeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 130 LECMKHNKHSNIIA----TGGKENDLKLWDLNTT--------KN---IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 130 v~~~~~~~~~~~l~----~~~~d~~i~vwd~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
|.+++|+|++++|+ +|+.|+.|++||+.++ ++ +..+.+|.. .|++++
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~------------------~V~~v~ 156 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG------------------MVIDMK 156 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG------------------SEEEEE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCC------------------ceEEEE
Confidence 99999999999999 7889999999999764 22 233333444 799999
Q ss_pred EecC-CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc
Q psy8152 195 FLPN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG 273 (444)
Q Consensus 195 ~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 273 (444)
|+|+ +.+|++++.||+|++||++ ....+.....|...|++++|+|+|++|++|+.||.|++||++ ++....+..
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~---~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~--~~~~~~~~~ 231 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVT---ETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT--LQEKKVIPC 231 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEES---SSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT--CCEEEEECC
T ss_pred ECCCCCCEEEEEECCCeEEEEEcC---CCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC--CcccccccC
Confidence 9998 6999999999999999999 556666667788899999999999999999999999999987 344444443
Q ss_pred c-------cCceeEEEecCCCCEEEEE-ECCC------cEEEEEcCCC
Q psy8152 274 F-------AGCVKDIACPLNENLILSV-SLDR------HFRVHDFHSK 307 (444)
Q Consensus 274 h-------~~~i~~~~~s~~~~~l~s~-~~dg------~i~vw~~~~~ 307 (444)
| ...|.+++|++++.++++. +.+| .+++|++...
T Consensus 232 ~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 232 PPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 3 3389999999988777553 3443 3899999864
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=1.1e-21 Score=192.33 Aligned_cols=259 Identities=12% Similarity=0.061 Sum_probs=188.2
Q ss_pred CCcccEEEecC-CCcEEEEEcCCCccceeeeeeecccCcc-cceEEEeeeccCCcEEEEEEc---CCeEEEEeCCC---C
Q psy8152 4 ADDYNIYIGSS-TGAFKGVNLSKDKCIIKNIQNVKYITNK-ASVLALNWGNVEESELLIAYS---GQKIKIYDTDF---K 75 (444)
Q Consensus 4 ~~~~~l~~g~~-dg~i~i~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~---d~~i~vw~~~~---~ 75 (444)
.+++.|+.++. +|.++||.+..+.. ..+. .|. ..|..++|+ |+ +.+++++. +...+||.+.. +
T Consensus 31 ~DG~~la~~s~~~g~~~lw~~~~g~~-----~~lt--~~~~~~~~~~~~s-pd-~~l~~~~~~~g~~~~~l~~~~~~~~g 101 (582)
T 3o4h_A 31 VDGDKLLVVGFSEGSVNAYLYDGGET-----VKLN--REPINSVLDPHYG-VG-RVILVRDVSKGAEQHALFKVNTSRPG 101 (582)
T ss_dssp ETTTEEEEEEEETTEEEEEEEETTEE-----EECC--SSCCSEECEECTT-CS-EEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred CCCCeEEEEEccCCceeEEEEcCCCc-----Eeee--cccccccccccCC-CC-eEEEEeccCCCCcceEEEEEeccCCC
Confidence 46677887776 99999999866552 2222 344 689999999 67 77777765 45556655432 2
Q ss_pred ccccceeeccccccEEEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC----Ce
Q psy8152 76 NFNTNTDVSFGEGDIVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE----ND 150 (444)
Q Consensus 76 ~~~~~~~~~~~~~~v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~ 150 (444)
....... .+...+.+++|+++. +++.+.++.+.+|++.+++... +..+.. .+++|+|+|++|++++.+ +.
T Consensus 102 ~~~~l~~--~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 102 EEQRLEA--VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp CCEECTT--SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-EEEESS--CEEEEEEETTEEEEEEEEETTEEE
T ss_pred ccccccC--CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-eecCCC--ceEEECCCCCEEEEEEEcCCCCeE
Confidence 2222211 223346788999864 3444455566699999887664 444443 899999999999988877 78
Q ss_pred EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc--eEEEEEcCCCCCccceEEE
Q psy8152 151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG--YVRVYDPKITTQRRPVLKV 228 (444)
Q Consensus 151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~ 228 (444)
|++||+.+++.. .+..+.. .+..++|+|+|++|+++..++ .|++||+. ..... .+
T Consensus 177 i~~~d~~~g~~~-~l~~~~~------------------~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~---~~~~~-~~ 233 (582)
T 3o4h_A 177 LFTSNLSSGGLR-VFDSGEG------------------SFSSASISPGMKVTAGLETAREARLVTVDPR---DGSVE-DL 233 (582)
T ss_dssp EEEEETTTCCCE-EECCSSC------------------EEEEEEECTTSCEEEEEECSSCEEEEEECTT---TCCEE-EC
T ss_pred EEEEcCCCCCce-EeecCCC------------------ccccceECCCCCEEEEccCCCeeEEEEEcCC---CCcEE-Ec
Confidence 999999887754 4444444 689999999999999888888 89999998 44444 56
Q ss_pred eCCCCCeeEEE--------EccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCc--
Q psy8152 229 DIPDVALSCIT--------TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRH-- 298 (444)
Q Consensus 229 ~~~~~~i~~~~--------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~-- 298 (444)
..+...+..++ |+|+|.++++++.++.++||++ ++.+. .+.+.|.+++|+ +++++++++.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~---g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~ 306 (582)
T 3o4h_A 234 ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID---GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPP 306 (582)
T ss_dssp CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET---TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE---CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCC
Confidence 66777777777 9999988999999999999998 34443 234678899999 8998888887754
Q ss_pred -EEEEEcCC
Q psy8152 299 -FRVHDFHS 306 (444)
Q Consensus 299 -i~vw~~~~ 306 (444)
|++|+..+
T Consensus 307 ~l~~~d~~~ 315 (582)
T 3o4h_A 307 RIVSLPSGE 315 (582)
T ss_dssp EEEEETTCC
T ss_pred eEEEEcCCC
Confidence 67777653
No 159
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.89 E-value=3.2e-20 Score=170.17 Aligned_cols=297 Identities=11% Similarity=0.051 Sum_probs=207.3
Q ss_pred CCCcccEEEec------CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----------CCe
Q psy8152 3 LADDYNIYIGS------STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----------GQK 66 (444)
Q Consensus 3 ~~~~~~l~~g~------~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----------d~~ 66 (444)
+.++.++++.. .++.|++||..+++. . ..+. .+..+ .++|+ |++++|+++.. ++.
T Consensus 12 ~~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~-~---~~i~--~g~~p--~i~~s-pdg~~lyv~~~~~~~~~~g~~~~~ 82 (361)
T 2oiz_A 12 APQENRIYVMDSVFMHLTESRVHVYDYTNGKF-L---GMVP--TAFNG--HVQVS-NDGKKIYTMTTYHERITRGKRSDV 82 (361)
T ss_dssp SCGGGEEEEEECCGGGGGGCEEEEEETTTCCE-E---EEEE--CCEEE--EEEEC-TTSSEEEEEEEEETTSSSSCEEEE
T ss_pred CCCCCEEEEECCCCCccccCeEEEEECCCCeE-E---EEec--CCCCC--ceEEC-CCCCEEEEEEecccccccCCCCCE
Confidence 44556677654 477999999888774 1 2222 33444 89999 79999998863 578
Q ss_pred EEEEeCCCCccccceeecc------ccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEecc
Q psy8152 67 IKIYDTDFKNFNTNTDVSF------GEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH 138 (444)
Q Consensus 67 i~vw~~~~~~~~~~~~~~~------~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~ 138 (444)
|.+||+.+++.+..+.... ....-.+++|+|++|+++.. ++.|.+||+.+++.+..+..+.. ...+.+.|.
T Consensus 83 v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~ 161 (361)
T 2oiz_A 83 VEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPN 161 (361)
T ss_dssp EEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTT
T ss_pred EEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCC
Confidence 9999999888887776431 12344778999999998874 57899999999877653144333 233567774
Q ss_pred C-CEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEc
Q psy8152 139 S-NIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDP 216 (444)
Q Consensus 139 ~-~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 216 (444)
+ ..+++.+.||.+.+|++.. ++....... . ..+.+.. ....+.++|++..++..+.++.|.++|+
T Consensus 162 ~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~--~----~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~v~v~d~ 228 (361)
T 2oiz_A 162 RPRSFMTICGDGGLLTINLGEDGKVASQSRS--K----QMFSVKD-------DPIFIAPALDKDKAHFVSYYGNVYSADF 228 (361)
T ss_dssp SSSEEEEEETTSSEEEEEECTTSSEEEEEEC--C----CCSCTTT-------SCBCSCCEECSSEEEEEBTTSEEEEEEC
T ss_pred CCeeEEEECCCCcEEEEEECCCCcEeeeccc--c----ceEcCCC-------CceEEEecccCCEEEEEeCCCeEEEEEe
Confidence 4 6788888999999999865 544322110 0 0011100 1123344677877777788999999998
Q ss_pred CCCCCccceEEEeCCC----------CCeeEEEEccCCCEEEEEcC-----------CCcEEEEEcCCCCcceeEecccc
Q psy8152 217 KITTQRRPVLKVDIPD----------VALSCITTTNQSHYVIVGST-----------TGDMMAVDLRGKGKPCYKYKGFA 275 (444)
Q Consensus 217 ~~~~~~~~~~~~~~~~----------~~i~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~h~ 275 (444)
. ......+..+.... .....++|+|+++.++++.. .+.|.+||+.+ ++.+.++..+.
T Consensus 229 ~-~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~ 306 (361)
T 2oiz_A 229 S-GDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD 306 (361)
T ss_dssp S-SSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT
T ss_pred c-CCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC
Confidence 7 22222222222110 11223789999888877543 34799999999 99999999776
Q ss_pred CceeEEEecCCCCEEEEEECCCcEEEEEcCCC--ceEEEe-ecCCceeEEEEcCC
Q psy8152 276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSK--KLLRKD-YMQSRLTSILVRSD 327 (444)
Q Consensus 276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~--~~~~~~-~~~~~i~~~~~~~~ 327 (444)
+.+++|+|+|++|++++. +.|.+||..++ +++.++ .+......+++.++
T Consensus 307 --p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 307 --ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp --CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred --eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence 899999999999998887 99999999999 998886 46677788888765
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=4e-20 Score=170.05 Aligned_cols=288 Identities=7% Similarity=0.065 Sum_probs=184.3
Q ss_pred CCcEEEEEEc----CCeEEEEeC--CCCccccceeeccccccEEEEEeCCCeEEEEecC----CcEEEEEcCC--CCccc
Q psy8152 54 EESELLIAYS----GQKIKIYDT--DFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS----GDVKLWRYKT--EPDQW 121 (444)
Q Consensus 54 ~~~~l~~~~~----d~~i~vw~~--~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d----g~i~iw~~~~--~~~~~ 121 (444)
...++++|+. ++.|++|.+ .+++.......+.......+++|++++|++++.+ +.|.+|++.. ++...
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 3456666643 568999976 4555544333223344457889999999998875 7999999875 33321
Q ss_pred --cccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCceeeeeeec---ccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 122 --TNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNTTKNIFSAKN---VSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 122 --~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
....+......+++ ++++|++++ .++.|.+|++.....+..+.. +.. ..|. ........+.+++|
T Consensus 92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g------~~~~-~~~~~~~~~~~~~~ 162 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKG------SGPD-KERQTMPHLHCVRI 162 (361)
T ss_dssp EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCC------CCSC-TTTCSSCCEEEEEE
T ss_pred eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccC------CCCC-ccccCCCcceEEEE
Confidence 22224556777777 777777766 578999999976433221110 000 0000 00111224688999
Q ss_pred ecCCCEEEEE-eCCceEEEEEcCCCCCc----c-c------eEEEeCCCCCeeEEEEccCCCEEEEEc-CCCcEEEEEcC
Q psy8152 196 LPNSDKVAVC-SKQGYVRVYDPKITTQR----R-P------VLKVDIPDVALSCITTTNQSHYVIVGS-TTGDMMAVDLR 262 (444)
Q Consensus 196 ~~~~~~l~~~-~~d~~i~i~d~~~~~~~----~-~------~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 262 (444)
+|++++|+++ ..++.|++|++. .... + . ..........+..++|+|+|++|++++ .++.|.+|++.
T Consensus 163 spdg~~l~~~~~~~~~v~v~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 163 TPDGKYLLADDLGTDQIHKFNIN-PNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEC-TTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEEc-CCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 9999866555 458899999988 2221 1 1 111223445578999999999887766 68999999998
Q ss_pred CCCcc--eeEec---cccCceeEEEecCCCCEEEEEECC--CcEEEEEcC--CCc--eEEEeecCCceeEEEEcCCCccc
Q psy8152 263 GKGKP--CYKYK---GFAGCVKDIACPLNENLILSVSLD--RHFRVHDFH--SKK--LLRKDYMQSRLTSILVRSDFSLE 331 (444)
Q Consensus 263 ~~~~~--~~~~~---~h~~~i~~~~~s~~~~~l~s~~~d--g~i~vw~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~ 331 (444)
+ +.. +..+. .+...+..++|+|+|++|+++..+ +.|.+|++. +++ .+..+.....+..++|+++
T Consensus 242 ~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spd---- 316 (361)
T 3scy_A 242 D-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPN---- 316 (361)
T ss_dssp T-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTT----
T ss_pred C-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCC----
Confidence 7 644 23332 334456899999999988776654 899999996 455 3333334456788888754
Q ss_pred ccchhhhhccccc-cCCCccccCC--Ccccccc
Q psy8152 332 NETKKEEQEHSEE-KGDSDEKYDP--EHFEMNQ 361 (444)
Q Consensus 332 ~~~~~~~~~~s~~-~d~~i~~W~~--~~~~~~~ 361 (444)
+++++.++ .++.+.+|.+ .++++..
T Consensus 317 -----g~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 317 -----GKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp -----SCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred -----CCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 56566555 6789999644 4555443
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.6e-21 Score=183.22 Aligned_cols=198 Identities=15% Similarity=0.116 Sum_probs=147.9
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcc--------ccce-----eeccccccEEE--EEeCCCeEE----E
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNF--------NTNT-----DVSFGEGDIVG--VSRYDECIL----T 102 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~--------~~~~-----~~~~~~~~v~~--~s~~~~~l~----~ 102 (444)
...+..++++ +.+.+|++++.++ ++||+...... .... ....+...|.+ ++|++++|+ +
T Consensus 36 ~~~~n~lavs-~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVS-NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEE-TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEe-cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 4468899999 7899999999887 89987532110 0000 00122344554 578899999 7
Q ss_pred EecCCcEEEEEcCCC--------Cc---cccccccCCCeEEEEEecc-CCEEEEeeCCCeEEEEEcCCceeeeeeecccc
Q psy8152 103 AVKSGDVKLWRYKTE--------PD---QWTNFNVGPQLECMKHNKH-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSH 170 (444)
Q Consensus 103 ~~~dg~i~iw~~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 170 (444)
++.|+.|+|||+.++ +. ...+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+.....|..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 888999999998754 11 2345568999999999996 89999999999999999999876666555555
Q ss_pred eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-------CCCeeEEEEccC
Q psy8152 171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-------DVALSCITTTNQ 243 (444)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~ 243 (444)
.|++++|+|++++|++|+.||+|++||++ ......+..+ ...|.+++|+++
T Consensus 194 ------------------~v~~v~wspdg~~lasgs~dg~v~iwd~~----~~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 194 ------------------AVTSVCWSPKGKQLAVGKQNGTVVQYLPT----LQEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp ------------------CEEEEEECTTSSCEEEEETTSCEEEECTT----CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred ------------------ceeEEEEcCCCCEEEEEcCCCcEEEEccC----CcccccccCCcccCCCCceeEEEEEEecC
Confidence 79999999999999999999999999988 2333334333 237899999998
Q ss_pred CCEEEE-EcCCC------cEEEEEcCC
Q psy8152 244 SHYVIV-GSTTG------DMMAVDLRG 263 (444)
Q Consensus 244 ~~~l~~-~~~dg------~i~iwd~~~ 263 (444)
+.++++ +..+| .+++|++++
T Consensus 252 ~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 252 YVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp TEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred ceEEEEEccCCCccCCCCceEEEEecc
Confidence 887765 33343 389999986
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=4.8e-22 Score=199.89 Aligned_cols=292 Identities=10% Similarity=0.001 Sum_probs=190.9
Q ss_pred EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc---cccEEEEEeCCCeEEEEec---------CCcEEEEE
Q psy8152 46 LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG---EGDIVGVSRYDECILTAVK---------SGDVKLWR 113 (444)
Q Consensus 46 ~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~---~~~v~~~s~~~~~l~~~~~---------dg~i~iw~ 113 (444)
..++|+ |++.+++ .+.|+.|++|++.+++....+..+.. .....+++|+|++|++++. ++.|++|+
T Consensus 19 ~~~~~s-~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 19 FFPNWI-SGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCEES-SSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CccEEC-CCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 478999 7886554 44689999999999987766542211 1455778999999998876 68999999
Q ss_pred cCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc-ccCccceeE
Q psy8152 114 YKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD-LRRPVWVNG 192 (444)
Q Consensus 114 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ 192 (444)
+.+++.+. .......+..++|+|+|+.|+++. ++.|++|++.+++.......... ..++.-.++... ........+
T Consensus 97 ~~~g~~~~-~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~-~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 97 LSNGEFVR-GNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRE-NKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTTTEECC-SSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBT-TTEEESSCCHHHHHHTTCSSCC
T ss_pred CCCCcccc-ceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCc-CCeEcccccceeeeecccCccc
Confidence 99887731 111235688999999999999986 78999999988776432211111 000000000000 000001258
Q ss_pred EEEecCCCEEEEEeCCc----------------------------------eEEEEEcCCCCCccce--E------EEeC
Q psy8152 193 ISFLPNSDKVAVCSKQG----------------------------------YVRVYDPKITTQRRPV--L------KVDI 230 (444)
Q Consensus 193 ~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~~--~------~~~~ 230 (444)
++|+|+|++|++++.|. .|++||+. ..... . .+..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~---~~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT---YPAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS---CHHHHCCEECCCCHHHHT
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC---CCCccceeEccCCccCCC
Confidence 99999999999887552 78899998 44332 1 1235
Q ss_pred CCCCeeEEEEccCCCEEEEEcCC----CcEEEEE----cCCCCcceeEe----ccccCcee-----EEEecCCCCEEEE-
Q psy8152 231 PDVALSCITTTNQSHYVIVGSTT----GDMMAVD----LRGKGKPCYKY----KGFAGCVK-----DIACPLNENLILS- 292 (444)
Q Consensus 231 ~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~~~~~~~~~----~~h~~~i~-----~~~~s~~~~~l~s- 292 (444)
|...+..++|+|+++++++.... ..|++|| +.+ +++...+ .+|...+. .++|+|+|+.|+.
T Consensus 251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 77788999999998877764332 2488899 777 6666555 46777676 7899999986554
Q ss_pred -EECCC--cEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhcccccc----CCCccccCCC
Q psy8152 293 -VSLDR--HFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEK----GDSDEKYDPE 355 (444)
Q Consensus 293 -~~~dg--~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~----d~~i~~W~~~ 355 (444)
+..+| .|++|++.+++......+...+..+.+. +- +..++++.. ++..++|.+.
T Consensus 330 ~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~--------~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQ--------DSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CS--------SEEEEEESCGGGCTTCBEEEEEE
T ss_pred EEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eC--------CEEEEEEecCCCCCceEEEEEEe
Confidence 44555 5777788777643222234446665554 31 133334433 5788999765
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=4.9e-20 Score=171.16 Aligned_cols=274 Identities=11% Similarity=0.004 Sum_probs=182.6
Q ss_pred EeeeccCCcEEEEEEc-CC--eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc
Q psy8152 48 LNWGNVEESELLIAYS-GQ--KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF 124 (444)
Q Consensus 48 ~~~~~~~~~~l~~~~~-d~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 124 (444)
.+|+ |++++|+.++. ++ .|.+|++.+++.......+........++|+++.|+.++.++.|++|++.+++......
T Consensus 41 ~~~S-pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFT-RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBC-TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCC-CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 7899 79999998887 66 48888998888776654222122134789999999999999999999999988765444
Q ss_pred ccCCCeEEEE--EeccCCEEEEe----------------------eCCCeEEEEEcCCceeeeeeecccceeeEeeeCCC
Q psy8152 125 NVGPQLECMK--HNKHSNIIATG----------------------GKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD 180 (444)
Q Consensus 125 ~~~~~v~~~~--~~~~~~~l~~~----------------------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (444)
.+...+.... ++|++.+++.. ..+..|.+||+.+++..... .+..
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~---------- 188 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQ---------- 188 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESS----------
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCc----------
Confidence 4555454444 47888888742 24578999999987654333 2333
Q ss_pred cccccCccceeEEEEec-CCCEEEEEeCC------ceEEEEEcCCCCCccceEEEeCCC--CCeeEEEEccCCCEEEEEc
Q psy8152 181 EFDLRRPVWVNGISFLP-NSDKVAVCSKQ------GYVRVYDPKITTQRRPVLKVDIPD--VALSCITTTNQSHYVIVGS 251 (444)
Q Consensus 181 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~ 251 (444)
.+..++|+| +++.|+.+... ..|.++++. .. ....+..+. ..+..++|+|+|+.|+..+
T Consensus 189 --------~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~---~~-~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 189 --------WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED---GT-NMRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp --------CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT---SC-CCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred --------cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC---CC-ceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 588999999 99888876653 378888876 22 233333333 2577889999999776533
Q ss_pred C-CC----cEEEEEcCCCCcc--eeEeccccCc---eeEEEecCCCCEEEEE---------ECCCcEEEEEcCCCceEEE
Q psy8152 252 T-TG----DMMAVDLRGKGKP--CYKYKGFAGC---VKDIACPLNENLILSV---------SLDRHFRVHDFHSKKLLRK 312 (444)
Q Consensus 252 ~-dg----~i~iwd~~~~~~~--~~~~~~h~~~---i~~~~~s~~~~~l~s~---------~~dg~i~vw~~~~~~~~~~ 312 (444)
. ++ .|++||+.+ ++. +..+.++... ...++|+|+|+.|+.. ..+..|++|++.+++....
T Consensus 257 ~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPET-LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRV 335 (388)
T ss_dssp EETTCCCEEEEEECTTT-CCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEE
T ss_pred cCCCCCcceEEEEecCC-CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEe
Confidence 2 22 399999998 663 3333331111 1223799999877754 4566899999998876444
Q ss_pred eecCC-----------ceeEEEEcCCCcccccchhhhhcc-ccccCCCccccCCC
Q psy8152 313 DYMQS-----------RLTSILVRSDFSLENETKKEEQEH-SEEKGDSDEKYDPE 355 (444)
Q Consensus 313 ~~~~~-----------~i~~~~~~~~~~~~~~~~~~~~~~-s~~~d~~i~~W~~~ 355 (444)
..+.. .+.+++|+++ ++.++ ++..++...||.+.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~spD---------g~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 336 ARHDTSWKVFEGDRQVTHPHPSFTPD---------DKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTT---------SSEEEEEECTTSSCEEEEEE
T ss_pred ccccCcccccccccccCCCCccCCCC---------CCEEEEEecCCCceeEEEEE
Confidence 44444 3566666644 55454 34456777777654
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=1.4e-19 Score=166.69 Aligned_cols=278 Identities=9% Similarity=-0.016 Sum_probs=178.6
Q ss_pred EEEEEEcC--CeEEEEeC--CCCccccceeec-cc--cccEEEEEeCCCeEEEEecCCcEEEEEcC-CCCcccccccc--
Q psy8152 57 ELLIAYSG--QKIKIYDT--DFKNFNTNTDVS-FG--EGDIVGVSRYDECILTAVKSGDVKLWRYK-TEPDQWTNFNV-- 126 (444)
Q Consensus 57 ~l~~~~~d--~~i~vw~~--~~~~~~~~~~~~-~~--~~~v~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~-- 126 (444)
+|++|+.. +.|.+|++ .+++....-... .+ ...-.+++|++++|++++.+ .|.+|++. +++... ...+
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEeec
Confidence 45666653 56887765 455443221111 11 33456789999999988888 99999997 776543 2222
Q ss_pred CCCeEEEEEeccCCE--EEEee-------------CCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152 127 GPQLECMKHNKHSNI--IATGG-------------KENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV 190 (444)
Q Consensus 127 ~~~v~~~~~~~~~~~--l~~~~-------------~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (444)
.+.+.+++|+|++++ ++++. .++.+.+|++.. ++....+..... .....+
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~--------------~~~~~~ 147 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY--------------QENTGI 147 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC--------------CTTCCE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe--------------CCCCcc
Confidence 134667899999984 55553 689999999974 554433321100 001258
Q ss_pred eEEEEecCCCEEEEEe-CCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEEccCCCEEEEEcC-CCcEEEEEcC--CC
Q psy8152 191 NGISFLPNSDKVAVCS-KQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITTTNQSHYVIVGST-TGDMMAVDLR--GK 264 (444)
Q Consensus 191 ~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~ 264 (444)
.+++|+|+|++|+++. .++.|++|++..++....+..+. .+...+..++|+|+|++|++++. ++.|.+|++. +
T Consensus 148 ~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~- 226 (365)
T 1jof_A 148 HGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT- 226 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT-
T ss_pred eEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC-
Confidence 8999999999888765 46899999997111222233343 23566899999999999887664 7899999875 4
Q ss_pred Ccce---e---Eec----cccC------ceeEEE-ecCCCCEEEEEECCC------cEEEEEcC-CCceEEE---ee-cC
Q psy8152 265 GKPC---Y---KYK----GFAG------CVKDIA-CPLNENLILSVSLDR------HFRVHDFH-SKKLLRK---DY-MQ 316 (444)
Q Consensus 265 ~~~~---~---~~~----~h~~------~i~~~~-~s~~~~~l~s~~~dg------~i~vw~~~-~~~~~~~---~~-~~ 316 (444)
++.. . .+. +|.. .+..++ |+|+|++|++++... .|.+|++. ++++... .. +.
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~ 306 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT 306 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC
Confidence 4432 1 222 1222 578999 999999888766432 89999996 5665432 22 33
Q ss_pred CceeEEEEcCCCcccccchhhhhcccccc-CCCccccCCCcc
Q psy8152 317 SRLTSILVRSDFSLENETKKEEQEHSEEK-GDSDEKYDPEHF 357 (444)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~s~~~-d~~i~~W~~~~~ 357 (444)
..+..++|++.. . +++++++++. ++.|++|++...
T Consensus 307 ~~~~~~a~sp~~----~--dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 307 SGGHSNAVSPCP----W--SDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CCTTCCCEEECT----T--CTTEEEEECSSSCEEEEEEEETT
T ss_pred CCcccceecCCC----c--CCCEEEEEEcCCCeEEEEEEchh
Confidence 345566665410 0 4577777765 589999988755
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=6.6e-20 Score=184.53 Aligned_cols=271 Identities=13% Similarity=0.055 Sum_probs=181.0
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc---cccE--EEEEeCCCeEEEEecC---------C
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG---EGDI--VGVSRYDECILTAVKS---------G 107 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~---~~~v--~~~s~~~~~l~~~~~d---------g 107 (444)
.....+++|+ |++.+|+++ |+.|++|++.+++....+..+.. .... .++||+|++|+.++.+ +
T Consensus 16 ~~~~~~~~w~-~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWI-SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEEC-SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEEC-CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 4456789999 789888886 89999999999987666542221 1223 6789999999998876 5
Q ss_pred cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc-ccC
Q psy8152 108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD-LRR 186 (444)
Q Consensus 108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (444)
.+.+||+.+++... +..|...+..++|+|+|+.||.+. ++.|++|++.+++...... .......+.-.++... ...
T Consensus 93 ~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~-~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 93 SYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW-TGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS-CCBTTTEEESBCCHHHHHHT
T ss_pred EEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC-CCCccceecCcccccccchh
Confidence 67799999998764 667788899999999999999985 6899999998876443211 1110000000000000 000
Q ss_pred ccceeEEEEecCCCEEEEEeCC------------------------------------ceEEEEEcCCCCC---cc--ce
Q psy8152 187 PVWVNGISFLPNSDKVAVCSKQ------------------------------------GYVRVYDPKITTQ---RR--PV 225 (444)
Q Consensus 187 ~~~i~~~~~~~~~~~l~~~~~d------------------------------------~~i~i~d~~~~~~---~~--~~ 225 (444)
-.....+.|||||++||.++.| .+|++||+. . .. ..
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~---~~~~~~~~~~ 246 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD---SLSSVTNATS 246 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT---SCCSSSCCCE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC---CCCCCCcceE
Confidence 0112458999999988876422 158889988 3 21 23
Q ss_pred EEEeC------CCCCeeEEEEccCCCEEEEEc----CCCcEEEEEcCCCCc----c--eeEe--ccccCcee-----EEE
Q psy8152 226 LKVDI------PDVALSCITTTNQSHYVIVGS----TTGDMMAVDLRGKGK----P--CYKY--KGFAGCVK-----DIA 282 (444)
Q Consensus 226 ~~~~~------~~~~i~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~----~--~~~~--~~h~~~i~-----~~~ 282 (444)
..+.. +...+..++|+|+|+.++... .+..|++||+.+ ++ + +..+ ..|...|. .++
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t-g~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE-SSGRWNCLVARQHIEMSTTGWVGRFRPSEPH 325 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET-TTTEEEECGGGCEEEECSSSCSSSSSCCCCE
T ss_pred EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC-CccccceeEEEEeeeccCCceEccCcCCCce
Confidence 33432 667789999999999766543 234799999998 76 1 2233 34555554 789
Q ss_pred ecCCCCEEE-EEEC-C--CcEEEEEcCCCceEEEeecCCceeEE
Q psy8152 283 CPLNENLIL-SVSL-D--RHFRVHDFHSKKLLRKDYMQSRLTSI 322 (444)
Q Consensus 283 ~s~~~~~l~-s~~~-d--g~i~vw~~~~~~~~~~~~~~~~i~~~ 322 (444)
|+|+|+.|+ ..+. + ..|++|++.+++..........+..+
T Consensus 326 fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~ 369 (740)
T 4a5s_A 326 FTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGI 369 (740)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEE
T ss_pred EcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEE
Confidence 999999777 6654 3 45888998877664433333344444
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=2.4e-19 Score=166.45 Aligned_cols=273 Identities=10% Similarity=0.035 Sum_probs=181.2
Q ss_pred CCcccEEEecC-CC--cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152 4 ADDYNIYIGSS-TG--AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN 80 (444)
Q Consensus 4 ~~~~~l~~g~~-dg--~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~ 80 (444)
+++..|+.++. +| .|.+|++.+++. ..+.. +|...+..++|+ |+++.|+.++.++.|++|++.+++....
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~g~~-----~~lt~-~~~~~~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNTQVA-----TQLTE-GRGDNTFGGFLS-PDDDALFYVKDGRNLMRVDLATLEENVV 117 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTCEE-----EECCC-SSCBCSSSCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCCCce-----EEeee-CCCCCccceEEc-CCCCEEEEEeCCCeEEEEECCCCcceee
Confidence 45566666665 66 477888877763 11111 455566678899 7999999999999999999999887766
Q ss_pred eeeccccccE--EEEEeCCCeEEEEe----------------------cCCcEEEEEcCCCCccccccccCCCeEEEEEe
Q psy8152 81 TDVSFGEGDI--VGVSRYDECILTAV----------------------KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHN 136 (444)
Q Consensus 81 ~~~~~~~~~v--~~~s~~~~~l~~~~----------------------~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~ 136 (444)
+..+...... ..+++++++++... .+..|++|++.+++.. .+..+...+..++|+
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~s 196 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYR 196 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEE
T ss_pred eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEEC
Confidence 5533322211 23368888877432 3467999999988766 366677789999999
Q ss_pred c-cCCEEEEeeCC------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC--
Q psy8152 137 K-HSNIIATGGKE------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-- 207 (444)
Q Consensus 137 ~-~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-- 207 (444)
| +++.|+..... ..|.++++..+... .+..+.. ...+..++|+|+|+.|+..+.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~----------------~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 197 PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAE----------------GESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCT----------------TEEEEEEEECTTSSCEEEEEEET
T ss_pred CCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCC----------------CcccccceECCCCCEEEEEecCC
Confidence 9 99998877753 37888887654432 2222221 014778899999987755433
Q ss_pred ---CceEEEEEcCCCCCccceEEEeCCCC---CeeEEEEccCCCEEEEE---------cCCCcEEEEEcCCCCcceeEec
Q psy8152 208 ---QGYVRVYDPKITTQRRPVLKVDIPDV---ALSCITTTNQSHYVIVG---------STTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 208 ---d~~i~i~d~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~---------~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
+..|++||+. ++..+.+..+..+.. ....++|+|+|+.|+.. ..+..|++||+.+ ++. ..+.
T Consensus 260 ~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~~-~~l~ 336 (388)
T 3pe7_A 260 GSPDRFIYSADPE-TLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN-GTQ-HRVA 336 (388)
T ss_dssp TCCCEEEEEECTT-TCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT-TEE-EEEE
T ss_pred CCCcceEEEEecC-CCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC-Cce-EEec
Confidence 2249999998 333334444433100 02234799999888754 4566899999987 554 4555
Q ss_pred cccC-----------ceeEEEecCCCCEEEEEE-CCCcEEEEEc
Q psy8152 273 GFAG-----------CVKDIACPLNENLILSVS-LDRHFRVHDF 304 (444)
Q Consensus 273 ~h~~-----------~i~~~~~s~~~~~l~s~~-~dg~i~vw~~ 304 (444)
.|.. .+.+++|+|+|++|+..+ .+|...||.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 337 RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 5555 578889999999887666 4666666644
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=3.3e-18 Score=172.15 Aligned_cols=297 Identities=8% Similarity=0.008 Sum_probs=178.1
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCccc-----ceEEEeeeccCCcEEEEEEcC---------CeEEE
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKA-----SVLALNWGNVEESELLIAYSG---------QKIKI 69 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~~~~~d---------~~i~v 69 (444)
.++.+|+++ +|.|++|++.+++.. ..+. +|.. ....+.|| |++++|+.++.+ +.+.+
T Consensus 26 ~dg~~~~~~--~~~i~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~S-pdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 26 SDHEYLYKQ--ENNILVFNAEYGNSS----VFLE--NSTFDEFGHSINDYSIS-PDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp SSSEEEEEE--TTEEEEEETTTCCEE----EEEC--TTTTTTCCSCCCEEEEC-TTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred CCCcEEEEc--CCcEEEEECCCCceE----EEEe--chhhhhhcccccceEEC-CCCCEEEEEECCeeeEEEccceEEEE
Confidence 345666665 899999999988741 1122 3332 23457889 799999998876 56779
Q ss_pred EeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc-ccCCCe-----------------E
Q psy8152 70 YDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF-NVGPQL-----------------E 131 (444)
Q Consensus 70 w~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~v-----------------~ 131 (444)
||+.+++...... +.......++||+|+.||.+ .++.|++|++.+++..+... ++...+ .
T Consensus 97 ~d~~~~~~~~l~~-~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 97 YDLNKRQLITEER-IPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EETTTTEECCSSC-CCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EECCCCcEEEccc-CCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 9999988665321 12233445679999999988 56899999998877654222 232222 3
Q ss_pred EEEEeccCCEEEEeeCCCe------------------------------------EEEEEcCC---ce--eeeeeecccc
Q psy8152 132 CMKHNKHSNIIATGGKEND------------------------------------LKLWDLNT---TK--NIFSAKNVSH 170 (444)
Q Consensus 132 ~~~~~~~~~~l~~~~~d~~------------------------------------i~vwd~~~---~~--~~~~~~~~~~ 170 (444)
.+.|+|+|+.||.++.|.. |++||+.+ ++ ....+...
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~-- 252 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP-- 252 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC--
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC--
Confidence 5899999999998764432 44444444 31 11111100
Q ss_pred eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe----CCceEEEEEcCCCCC----ccceEEE--eCCCCCee----
Q psy8152 171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS----KQGYVRVYDPKITTQ----RRPVLKV--DIPDVALS---- 236 (444)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~----~~~~~~~--~~~~~~i~---- 236 (444)
.....+...+..++|+|+++.++... .+..|++||+. ++. ...+..+ ..+...+.
T Consensus 253 ----------~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~-tg~~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (740)
T 4a5s_A 253 ----------ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD-ESSGRWNCLVARQHIEMSTTGWVGRFRP 321 (740)
T ss_dssp ----------HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE-TTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred ----------ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC-CCccccceeEEEEeeeccCCceEccCcC
Confidence 00001233689999999998666542 23479999998 222 1112222 44555444
Q ss_pred -EEEEccCCCEEE-EEc-CCC--cEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECC-----C--cEEEEEc
Q psy8152 237 -CITTTNQSHYVI-VGS-TTG--DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLD-----R--HFRVHDF 304 (444)
Q Consensus 237 -~~~~~~~~~~l~-~~~-~dg--~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g--~i~vw~~ 304 (444)
.++|+|+|+.|+ ..+ .+| .|++|++.. +.+. .+......|..+.+ ++++.|+..+.. + .|+..++
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~-~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDK-KDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETTC-SSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEET
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECCC-CceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEEC
Confidence 789999999876 554 333 588888876 5444 44434455665542 346655544433 3 3444555
Q ss_pred CCCceEEEeec-----CCceeEEEEcCC
Q psy8152 305 HSKKLLRKDYM-----QSRLTSILVRSD 327 (444)
Q Consensus 305 ~~~~~~~~~~~-----~~~i~~~~~~~~ 327 (444)
..+.....+.. ........|+++
T Consensus 399 ~g~~~~~~lt~~~~~~~~~~~~~~~S~d 426 (740)
T 4a5s_A 399 IDYTKVTCLSCELNPERCQYYSVSFSKE 426 (740)
T ss_dssp TEEEEEEESSTTTSTTTBCBEEEEECTT
T ss_pred CCCCcceeeccccCCCCCceEEEEECCC
Confidence 54433222321 245667777655
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=1e-18 Score=173.96 Aligned_cols=288 Identities=8% Similarity=-0.045 Sum_probs=186.5
Q ss_pred CcccceEEEeeeccCCcEEEEE--EcCCeEEEEeCCCCccccceeecccccc-----------EEEEE--eCCCe-EEEE
Q psy8152 40 TNKASVLALNWGNVEESELLIA--YSGQKIKIYDTDFKNFNTNTDVSFGEGD-----------IVGVS--RYDEC-ILTA 103 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~--~~d~~i~vw~~~~~~~~~~~~~~~~~~~-----------v~~~s--~~~~~-l~~~ 103 (444)
+|...|..++|+ ++.-++++. +.++...||....+.....+. .+... ...++ |+|++ |+.+
T Consensus 21 ~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 21 SRSGRPACVGAV-GDEVWWVAPRPAEAGRATLVRRRADGAEESAL--PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HTCSCCEEEEEE-TTEEEEEEEETTTTTEEEEEEECTTSCEEESS--CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred hcCCccceeEEc-CCeEEEEecCcccCCcEEEEEECCCCCcceeC--CCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 688999999999 565555555 447889999854333333332 22222 23344 89998 7766
Q ss_pred ec-CCcEEEEEcC--C-CCccccccc-----cCCCeEEEEEeccCCEEEEeeCC----------CeEEEEEcCC------
Q psy8152 104 VK-SGDVKLWRYK--T-EPDQWTNFN-----VGPQLECMKHNKHSNIIATGGKE----------NDLKLWDLNT------ 158 (444)
Q Consensus 104 ~~-dg~i~iw~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~vwd~~~------ 158 (444)
+. +..|.+|++. . +... .+.. |...+..++|+|+|+.|++++.+ ..|++|++.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~~~-~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAVPR-PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp BTTTCCEEEECTTSTTCCCCE-ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred ECCCCeEEEEcCCCCCCCCCE-eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 54 5567777765 3 4433 3444 56778999999999999998876 5899999987
Q ss_pred ceeeeeee-cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC--------ceEEEEEcCCCCC-ccceEEE
Q psy8152 159 TKNIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ--------GYVRVYDPKITTQ-RRPVLKV 228 (444)
Q Consensus 159 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~-~~~~~~~ 228 (444)
++.. .+. .+.. .+..++|+|+|++|+.++.+ ..|++||+..++. .......
T Consensus 177 ~~~~-~l~~~~~~------------------~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 177 SAVR-ELSDDAHR------------------FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp GGSE-ESSCSCSS------------------EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred Ccee-EEEecCCC------------------cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 5443 332 2222 57889999999999877754 4899999981111 1233323
Q ss_pred eCCCCCeeEEEEccCCCEEEEEcCCC--cEEEEEcCCCCcceeEeccccCc--------eeEEEecCCCCEEEEEECCCc
Q psy8152 229 DIPDVALSCITTTNQSHYVIVGSTTG--DMMAVDLRGKGKPCYKYKGFAGC--------VKDIACPLNENLILSVSLDRH 298 (444)
Q Consensus 229 ~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~h~~~--------i~~~~~s~~~~~l~s~~~dg~ 298 (444)
..+...+..++|+|+|++++++..++ .|++|++.. ++.......+... +..++|+|+++++++++. +.
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~ 315 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA 315 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS
T ss_pred CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc
Confidence 34567789999999999888888888 566677656 5544433333222 567899999999999998 99
Q ss_pred EEEE--EcCCCceEEEee-cCCceeEE-EEcCCCcccccchhhhhccccccCCCcccc--CCCccccccc
Q psy8152 299 FRVH--DFHSKKLLRKDY-MQSRLTSI-LVRSDFSLENETKKEEQEHSEEKGDSDEKY--DPEHFEMNQV 362 (444)
Q Consensus 299 i~vw--~~~~~~~~~~~~-~~~~i~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W--~~~~~~~~~~ 362 (444)
++|| ++.+++ +..+. +...+..+ .+. ++..++++.+.+....+| ++.+++...+
T Consensus 316 ~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~---------~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 316 AVLGILDPESGE-LVDAAGPWTEWAATLTVS---------GTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp CEEEEEETTTTE-EEECCSSCCEEEEEEEEE---------TTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred cEEEEEECCCCc-EEEecCCCCeEEEEEecC---------CCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 9999 555555 34443 44455554 322 222344444555444444 5545544433
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=7.7e-18 Score=149.44 Aligned_cols=241 Identities=10% Similarity=0.090 Sum_probs=173.9
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec----cccccEEEEE---eCCCeEEEEec-CCcEEE
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS----FGEGDIVGVS---RYDECILTAVK-SGDVKL 111 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~----~~~~~v~~~s---~~~~~l~~~~~-dg~i~i 111 (444)
+|-..+.+++++ +++.++++...++.|++|+.. ++....+... .+...+..+. +++.++++... ++.|++
T Consensus 27 g~~~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVN-AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEEC-TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEEC-CCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 556788999999 788888888888999999987 5555444321 1223344443 34555555433 889999
Q ss_pred EEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152 112 WRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV 190 (444)
Q Consensus 112 w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (444)
|+ .+++.+..+. .+...+.+++++|+++++++...++.|.+|+.. ++.+..+..... ...+
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~----------------~~~p 166 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH----------------LEFP 166 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTT----------------CSSE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCc----------------cCCc
Confidence 99 4555554332 244578999999999988888888999999965 454444432111 1148
Q ss_pred eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC--CCCeeEEEEccCCCEEEEEcCCC-cEEEEEcCCCCcc
Q psy8152 191 NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP--DVALSCITTTNQSHYVIVGSTTG-DMMAVDLRGKGKP 267 (444)
Q Consensus 191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~ 267 (444)
.+++++|+++++++...++.|++|+.. ...+..+..+ ...+..++++|+|+++++...++ .|++|+. . ++.
T Consensus 167 ~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~-g~~ 240 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAHCVKVFNYE----GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-D-GQL 240 (286)
T ss_dssp EEEEECSSSEEEEEEGGGTEEEEEETT----CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-T-SCE
T ss_pred EEEEECCCCCEEEEECCCCEEEEEcCC----CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-C-CCE
Confidence 899999999888888889999999977 3444555433 35688999999999888887776 9999995 4 677
Q ss_pred eeEecccc--CceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152 268 CYKYKGFA--GCVKDIACPLNENLILSVSLDRHFRVHDFHSK 307 (444)
Q Consensus 268 ~~~~~~h~--~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 307 (444)
+..+..+. ..+.+++++|+|+++++ +.+++|++|++...
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 241 ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 77776543 34779999999987776 67999999998654
No 170
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.83 E-value=1.1e-17 Score=151.30 Aligned_cols=282 Identities=7% Similarity=-0.070 Sum_probs=196.5
Q ss_pred CCCcEEEEEcCCCccceeee-eeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE
Q psy8152 14 STGAFKGVNLSKDKCIIKNI-QNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG 92 (444)
Q Consensus 14 ~dg~i~i~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~ 92 (444)
.++.|.+||..+++.. ..+ ..............+++. .+..+++...++.|.+||..+++.+..+.. .....-.+
T Consensus 15 ~~~~l~~~d~~t~~~~-~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVE-NEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEE-CSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEE
T ss_pred CCceEEEEECCCCEEh-hhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEE
Confidence 3789999999988742 111 100100122446778776 355555666679999999999998887742 22333455
Q ss_pred EEeCCCeEEEEecCCcEEEEEcCCCCccccccccC-----CCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeee
Q psy8152 93 VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVG-----PQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSA 165 (444)
Q Consensus 93 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~ 165 (444)
++++++++++...++.|.+||+.+++....+.... .....+++ . +..|+++. .++.|.+||+.+++.+..+
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 67888544444488999999999887664222111 15567777 3 44555544 4889999999998887766
Q ss_pred ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC----------ceEEEEEcCCCCCccceEEEeCC-CCC
Q psy8152 166 KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ----------GYVRVYDPKITTQRRPVLKVDIP-DVA 234 (444)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~-~~~ 234 (444)
..... ...++++|++++++++..+ +.|.+||.. ..+....+... ...
T Consensus 169 ~~g~~-------------------p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~---t~~v~~~~~~~~g~~ 226 (328)
T 3dsm_A 169 TIGIQ-------------------PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE---TFTVEKQFKFKLGDW 226 (328)
T ss_dssp ECSSC-------------------BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT---TTEEEEEEECCTTCC
T ss_pred EcCCC-------------------ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC---CCeEEEEEecCCCCC
Confidence 54333 5678999999877776655 789999998 56665555432 235
Q ss_pred eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE--eccccCceeEEEecCC-CCEEEEE----ECCCcEEEEEcCCC
Q psy8152 235 LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK--YKGFAGCVKDIACPLN-ENLILSV----SLDRHFRVHDFHSK 307 (444)
Q Consensus 235 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~h~~~i~~~~~s~~-~~~l~s~----~~dg~i~vw~~~~~ 307 (444)
...++|+|++++|+++.. .|.+||+.+ ++.... +..+......++++|+ +.++++. ..++.|.+|+.. +
T Consensus 227 p~~la~~~d~~~lyv~~~--~v~~~d~~t-~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g 302 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN--DIWRMPVEA-DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G 302 (328)
T ss_dssp CEEEEECTTSCEEEEESS--SEEEEETTC-SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C
T ss_pred ceeEEEecCCCEEEEEcc--EEEEEECCC-CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C
Confidence 789999999999988765 899999988 665421 2222456889999994 5555665 568899999998 9
Q ss_pred ceEEEeecCCceeEEEEcCC
Q psy8152 308 KLLRKDYMQSRLTSILVRSD 327 (444)
Q Consensus 308 ~~~~~~~~~~~i~~~~~~~~ 327 (444)
+++.++........++|.+.
T Consensus 303 ~~~~~i~~G~~P~~~~~~~~ 322 (328)
T 3dsm_A 303 KLIDEFYVGIIPGAFCWKLE 322 (328)
T ss_dssp CEEEEEEEEESEEEEEEECC
T ss_pred CEEEEEEeccCcceEEEecc
Confidence 99998887777788887654
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=5.2e-18 Score=153.68 Aligned_cols=249 Identities=8% Similarity=0.037 Sum_probs=181.2
Q ss_pred ccceEEEeeeccCCcEEEEEEcC------------------------CeEEEEeCCCCccccceeeccc--cccEEEEEe
Q psy8152 42 KASVLALNWGNVEESELLIAYSG------------------------QKIKIYDTDFKNFNTNTDVSFG--EGDIVGVSR 95 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d------------------------~~i~vw~~~~~~~~~~~~~~~~--~~~v~~~s~ 95 (444)
-+.|.+|+++ ++++++++...+ +.|.+||..+++....+. ..+ ...-.++++
T Consensus 23 l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG-KNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC-TTTCSSEEEEEECT
T ss_pred cCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC-CCccCCceEEEECC
Confidence 4679999999 789888887776 479999998888765543 122 222355678
Q ss_pred CCCeEEEEecCCcEEEEEcCCCC-ccccc---------cccCCCeEEEEEec-cCCEEEEee-CCCeEEEEEcCCceeee
Q psy8152 96 YDECILTAVKSGDVKLWRYKTEP-DQWTN---------FNVGPQLECMKHNK-HSNIIATGG-KENDLKLWDLNTTKNIF 163 (444)
Q Consensus 96 ~~~~l~~~~~dg~i~iw~~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~vwd~~~~~~~~ 163 (444)
+++++++...++.|++|+..... .+..+ ..+......++++| ++.++++.+ .++.|++|+ ..++.+.
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 89988888889999999986542 33222 23444689999999 888888886 689999999 4566665
Q ss_pred eeecccceeeEeeeCCCcccccCccceeEEEEecC-CCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEE
Q psy8152 164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITT 240 (444)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~ 240 (444)
.+...... .......-..+..|+++|+ +.++++...++.|++|+.. .++.+..+. .+...+..++|
T Consensus 180 ~~~~~g~~--------~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~---~G~~~~~~~~~~~~~~~~~~~~ 248 (329)
T 3fvz_A 180 QWGEESSG--------SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD---TKEFVREIKHASFGRNVFAISY 248 (329)
T ss_dssp EECEECCS--------SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT---TCCEEEEECCTTTTTCEEEEEE
T ss_pred EeccCCCC--------CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC---CCcEEEEEeccccCCCcceeee
Confidence 55322210 0000000114789999998 6777888889999999988 566666663 34567889999
Q ss_pred ccCCCEEEE-------EcCCCcEEEEEcCCCCcceeEec---cccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 241 TNQSHYVIV-------GSTTGDMMAVDLRGKGKPCYKYK---GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 241 ~~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~~---~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
+| +..+++ ...+..|++|++.+ ++.+..+. ++...+..|+++|+|.++++...++.|++|++..
T Consensus 249 ~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 249 IP-GFLFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ET-TEEEEEECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred cC-CEEEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 99 433333 33455899999999 99988884 5677789999999998888888899999999754
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=3.8e-19 Score=165.50 Aligned_cols=277 Identities=8% Similarity=-0.047 Sum_probs=178.0
Q ss_pred ccceEEEeeeccCCcEEEEEEcC---CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152 42 KASVLALNWGNVEESELLIAYSG---QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP 118 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 118 (444)
...+.+++|+ |++++|+.+... ..|++|++.+++................++|++++|+.++.++.|++|++.+++
T Consensus 35 ~~~~~~~~~S-pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 35 RNYFYQKCFT-QDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp CCCTTSCCBC-TTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ceeeecCcCC-CCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 3447889999 799998876543 478889998877654432111112225679999999999999999999999887
Q ss_pred ccccccccCCCeEE-------------------EEEeccCCEEEEe-----eCCCeEEEEEcCCceeeeeeecccceeeE
Q psy8152 119 DQWTNFNVGPQLEC-------------------MKHNKHSNIIATG-----GKENDLKLWDLNTTKNIFSAKNVSHRVLV 174 (444)
Q Consensus 119 ~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 174 (444)
.......+...... +.|+|+++.++.+ ..+..|.+||+.+++...... +..
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~~---- 188 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DTA---- 188 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ESS----
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CCc----
Confidence 65433323332222 3456666666544 356689999998876554432 222
Q ss_pred eeeCCCcccccCccceeEEEEec-CCCEEEEEeCC------ceEEEEEcCCCCCccceEEEeCC--CCCeeEEEEccCCC
Q psy8152 175 YSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQ------GYVRVYDPKITTQRRPVLKVDIP--DVALSCITTTNQSH 245 (444)
Q Consensus 175 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~ 245 (444)
.+..+.|+| +++.|+..+.+ ..|.+|++. ... ...+..+ ...+..++|+|+|+
T Consensus 189 --------------~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~---~~~-~~~l~~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 189 --------------WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED---GSN-VRKIKEHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp --------------CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT---SCC-CEESSCCCTTEEEEEEEECTTSS
T ss_pred --------------ccccceECCCCCCEEEEEecCCCCCCCceEEEEECC---CCc-eeEeeccCCCccccceEECCCCC
Confidence 588999999 78767665543 368888887 222 2222222 23577899999999
Q ss_pred EEEEEcCC-----CcEEEEEcCCCCcceeEeccccCceeEEEecC-CCCEEEEEE----------------CCCcEEEEE
Q psy8152 246 YVIVGSTT-----GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL-NENLILSVS----------------LDRHFRVHD 303 (444)
Q Consensus 246 ~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~-~~~~l~s~~----------------~dg~i~vw~ 303 (444)
+|+.++.+ +.|++||+.+ ++...... ... .. +.|+| ++++|++++ .+..|++|+
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d 326 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPET-LENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTT-CCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEE
T ss_pred EEEEEecCCCCccceEEEEECCC-CCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEe
Confidence 87776443 4499999987 65433222 111 23 88999 999888765 347899999
Q ss_pred cCCCceEEEeecCCc-----------eeEEEEcCCCcccccchhhhhccccc-cCCCccccCCC
Q psy8152 304 FHSKKLLRKDYMQSR-----------LTSILVRSDFSLENETKKEEQEHSEE-KGDSDEKYDPE 355 (444)
Q Consensus 304 ~~~~~~~~~~~~~~~-----------i~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~i~~W~~~ 355 (444)
+.+++......+... +..++|+ |+++.++..+ .++...||.+.
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s---------~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 327 TKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFT---------PNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTTTBCCEEEECCCCCCCBTTBSSTTCCCCEEC---------TTSSEEEEEECTTSSCEEEEEE
T ss_pred cccCceEEccCCCCccccccccccCCCCCceEc---------cCCCeEEEEecCCCCceEEEEE
Confidence 988775433233331 3444554 4455555443 45666676543
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=2e-18 Score=160.58 Aligned_cols=273 Identities=8% Similarity=-0.028 Sum_probs=173.9
Q ss_pred CCcccEEEec-CC--CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc
Q psy8152 4 ADDYNIYIGS-ST--GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN 80 (444)
Q Consensus 4 ~~~~~l~~g~-~d--g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~ 80 (444)
+++.+|+... .+ ..|.+|++.+++. ..+.. ++......+.|+ |++++|+.++.++.|++|++.+++....
T Consensus 45 pdG~~l~~~~~~~g~~~l~~~d~~~~~~-----~~l~~-~~~~~~~~~~~s-pdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 45 QDGKKLLFAGDFDGNRNYYLLNLETQQA-----VQLTE-GKGDNTFGGFIS-TDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTTEE-----EECCC-SSCBCTTTCEEC-TTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCcE-----EEeec-CCCCccccceEC-CCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 3455555543 33 4678888877662 22211 222233347899 7999999999999999999988876655
Q ss_pred eeeccccccE-------------------EEEEeCCCeEEEE-----ecCCcEEEEEcCCCCccccccccCCCeEEEEEe
Q psy8152 81 TDVSFGEGDI-------------------VGVSRYDECILTA-----VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHN 136 (444)
Q Consensus 81 ~~~~~~~~~v-------------------~~~s~~~~~l~~~-----~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~ 136 (444)
+..+..-.+. ..++|+++.++.+ ..+..|++|++.+++... +..+...+..+.|+
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV-IHQDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe-eccCCcccccceEC
Confidence 4422210000 1235566655543 355689999999887664 45677789999999
Q ss_pred c-cCCEEEEeeCC------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-
Q psy8152 137 K-HSNIIATGGKE------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ- 208 (444)
Q Consensus 137 ~-~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d- 208 (444)
| ++..|+..+.+ ..|.+|++..++...... +.. ...+..++|+|++++|+.++.+
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~----------------~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAE----------------GESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCT----------------TEEEEEEEECTTSSCEEEEEEET
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCC----------------CccccceEECCCCCEEEEEecCC
Confidence 9 88877766543 368888887654322221 110 1147889999999877766543
Q ss_pred ----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc-CCCEEEEEc----------------CCCcEEEEEcCCCCcc
Q psy8152 209 ----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN-QSHYVIVGS----------------TTGDMMAVDLRGKGKP 267 (444)
Q Consensus 209 ----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~----------------~dg~i~iwd~~~~~~~ 267 (444)
+.|++||+. ++....+..+. . .. +.|+| +|++|++++ .++.|++||+.+ ++.
T Consensus 260 ~~~~~~l~~~d~~-~g~~~~l~~~~---~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~-~~~ 332 (396)
T 3c5m_A 260 GQTDRVIYKANPE-TLENEEVMVMP---P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA-KSA 332 (396)
T ss_dssp TTCCEEEEEECTT-TCCEEEEEECC---S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT-TBC
T ss_pred CCccceEEEEECC-CCCeEEeeeCC---C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc-Cce
Confidence 559999998 22222222222 1 33 88999 999888754 346899999987 654
Q ss_pred eeEeccccC-----------ceeEEEecCCCCEEEEEEC-CCcEEE--EEcCCCce
Q psy8152 268 CYKYKGFAG-----------CVKDIACPLNENLILSVSL-DRHFRV--HDFHSKKL 309 (444)
Q Consensus 268 ~~~~~~h~~-----------~i~~~~~s~~~~~l~s~~~-dg~i~v--w~~~~~~~ 309 (444)
..+..+.. .+..++|+|+|+.|+.++. ++...| +++.+++.
T Consensus 333 -~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 333 -QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp -CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred -EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 44554443 2567899999998887764 454444 45555443
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=6.1e-17 Score=161.18 Aligned_cols=267 Identities=7% Similarity=-0.047 Sum_probs=172.7
Q ss_pred cCCCcEEEEEcCCCccceeeeeeecccCcccceE---------EEeeec-cCCcE-EEEEEc-CCeEEEEeCC--C-Ccc
Q psy8152 13 SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVL---------ALNWGN-VEESE-LLIAYS-GQKIKIYDTD--F-KNF 77 (444)
Q Consensus 13 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~~-~~~~~-l~~~~~-d~~i~vw~~~--~-~~~ 77 (444)
+.++...||....+.. . ..+. .|...+. ...|+. |++++ |+.++. +..|++|++. + +..
T Consensus 44 ~~~~~~~l~~~~~~~~-~---~~l~--~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~ 117 (662)
T 3azo_A 44 AEAGRATLVRRRADGA-E---ESAL--PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP 117 (662)
T ss_dssp TTTTEEEEEEECTTSC-E---EESS--CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC
T ss_pred ccCCcEEEEEECCCCC-c---ceeC--CCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC
Confidence 4478899998643332 1 2222 4445555 555652 68888 766554 5677777775 3 443
Q ss_pred ccceeecc---ccccE--EEEEeCCCeEEEEecC----------CcEEEEEcCC------CCcccccc-ccCCCeEEEEE
Q psy8152 78 NTNTDVSF---GEGDI--VGVSRYDECILTAVKS----------GDVKLWRYKT------EPDQWTNF-NVGPQLECMKH 135 (444)
Q Consensus 78 ~~~~~~~~---~~~~v--~~~s~~~~~l~~~~~d----------g~i~iw~~~~------~~~~~~~~-~~~~~v~~~~~ 135 (444)
. .+.... |...+ .+++|+|+.|++++.+ ..|++|++.+ ++.. .+. .+...+..++|
T Consensus 118 ~-~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~ 195 (662)
T 3azo_A 118 R-PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRL 195 (662)
T ss_dssp E-ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEE
T ss_pred E-eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceE
Confidence 2 222111 33333 5678999999988876 5899999987 5544 355 56677889999
Q ss_pred eccCCEEEEeeCC--------CeEEEEEcC-Cc---eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152 136 NKHSNIIATGGKE--------NDLKLWDLN-TT---KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA 203 (444)
Q Consensus 136 ~~~~~~l~~~~~d--------~~i~vwd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 203 (444)
+|+|++|+.++.+ ..|++|++. ++ +.......+.. .+..++|+|+|++++
T Consensus 196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~------------------~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE------------------AIAQAEWAPDGSLIV 257 (662)
T ss_dssp CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB------------------CEEEEEECTTSCEEE
T ss_pred CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc------------------eEcceEECCCCeEEE
Confidence 9999999988755 379999998 56 33333333333 589999999999888
Q ss_pred EEeCCc--eEEEEEcCCCCCccceEEEeCCCCC---------eeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152 204 VCSKQG--YVRVYDPKITTQRRPVLKVDIPDVA---------LSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 204 ~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
++..++ .|.+|++. ..... .+..+... +..++|+|+++++++++. +.++||.+...+..+..+.
T Consensus 258 ~~~~~~~~~l~~~~~~---~~~~~-~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 258 ATDRTGWWNLHRVDPA---TGAAT-QLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp EECTTSSCEEEEECTT---TCCEE-ESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECC
T ss_pred EECCCCCeEEEEEECC---CCcee-ecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEec
Confidence 888888 56666654 22222 22222211 567899999999999998 9999994432134477788
Q ss_pred cccCceeEE-EecCCCCEEEEEECCC--cEEEEEcCCCceE
Q psy8152 273 GFAGCVKDI-ACPLNENLILSVSLDR--HFRVHDFHSKKLL 310 (444)
Q Consensus 273 ~h~~~i~~~-~~s~~~~~l~s~~~dg--~i~vw~~~~~~~~ 310 (444)
.|...+..+ +++++.-++++++.+. .|++|++.+++..
T Consensus 333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 787778777 5544333444555554 4556677676653
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=5.1e-17 Score=148.34 Aligned_cols=259 Identities=8% Similarity=0.010 Sum_probs=174.3
Q ss_pred ccceEEEeeeccCCcEEEEEE---------cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC---C--
Q psy8152 42 KASVLALNWGNVEESELLIAY---------SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS---G-- 107 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~---------~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d---g-- 107 (444)
...+..+++ ++++++... .++.|++|++.+++.... .......++|+|++|+.++.+ +
T Consensus 14 ~~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 14 FAYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp SCEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred eEEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 345566666 477776542 257899999988764332 234456789999998887754 2
Q ss_pred cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCC---------------------------CeEEEEEcCCce
Q psy8152 108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKE---------------------------NDLKLWDLNTTK 160 (444)
Q Consensus 108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------~~i~vwd~~~~~ 160 (444)
.|.+|++.+++... +..+.. +..++|+|+++.|+.++.+ ..|.+|++.+++
T Consensus 86 ~l~~~~~~~g~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 37888888877654 444444 9999999999999887642 568899998877
Q ss_pred eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-------eEEEEEcCCCCCccceEEEeCCCC
Q psy8152 161 NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-------YVRVYDPKITTQRRPVLKVDIPDV 233 (444)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~~~ 233 (444)
.+..+... . +..++|+|++ +++++..+. ...||.+. +... ..+..+ .
T Consensus 164 ~~~~l~~~-~-------------------~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~---~~l~~~-~ 217 (347)
T 2gop_A 164 VIEEFEKP-R-------------------FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKE---EKMFEK-V 217 (347)
T ss_dssp EEEEEEEE-T-------------------TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEE---EEEEEE-E
T ss_pred EEeeecCC-C-------------------cccccCCCCe-EEEEEecccccccccccccEEEeC-CCce---EEeccC-c
Confidence 63333321 3 7789999999 777775542 33444443 1222 222223 3
Q ss_pred CeeEEEEccCCCEEEEEcCC--------CcEEEEEcCCCCcceeEeccccCceeE-EEecCCCCEEEEEECCCcEEEEEc
Q psy8152 234 ALSCITTTNQSHYVIVGSTT--------GDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
.+..+ +|+|++|+.++.+ ..|++|| + ++.......|...+.. +.|+ ++ ++++++.++.++|| +
T Consensus 218 ~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~ 289 (347)
T 2gop_A 218 SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-I 289 (347)
T ss_dssp SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-E
T ss_pred ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-E
Confidence 44443 9999988876644 3688888 5 6655555566778886 8999 88 89999999999999 8
Q ss_pred CCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCc-cccCCC
Q psy8152 305 HSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSD-EKYDPE 355 (444)
Q Consensus 305 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i-~~W~~~ 355 (444)
.+++......+...+.+++|++ ..+++++.++.. +||.+.
T Consensus 290 ~~g~~~~~~~~~~~v~~~~~s~-----------~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 290 WDGEIKPIAKGRHWIMGFDVDE-----------IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ESSSEEEEECSSSEEEEEEESS-----------SEEEEEECSSSCCEEEEES
T ss_pred cCCceEEEecCCCeEEeeeeeC-----------cEEEEEcCCCChHHheEeC
Confidence 8766644444666788887763 244555555554 778665
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=9.3e-17 Score=146.60 Aligned_cols=242 Identities=6% Similarity=-0.013 Sum_probs=164.4
Q ss_pred CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC---C--eEEEEeCCCCccccceeecccccc
Q psy8152 15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG---Q--KIKIYDTDFKNFNTNTDVSFGEGD 89 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d---~--~i~vw~~~~~~~~~~~~~~~~~~~ 89 (444)
++.|.+|++.+++. ..+ ..+..++|+ |++++|+.++.+ + .|++|++.+++........ ...
T Consensus 42 ~~~l~~~d~~~~~~-----~~l------~~~~~~~~S-pDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~--~~~ 107 (347)
T 2gop_A 42 ENTIVIENLKNNAR-----RFI------ENATMPRIS-PDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK--NIR 107 (347)
T ss_dssp EEEEEEEETTTCCE-----EEE------ESCEEEEEC-TTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES--EEE
T ss_pred cceEEEEeCCCCce-----EEc------ccCCCeEEC-CCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC--Ccc
Confidence 66788999887762 112 467889999 799999987754 2 4888888887766554322 233
Q ss_pred EEEEEeCCCeEEEEecC---------------------------CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEE
Q psy8152 90 IVGVSRYDECILTAVKS---------------------------GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII 142 (444)
Q Consensus 90 v~~~s~~~~~l~~~~~d---------------------------g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 142 (444)
...++|+++.|+.++.+ ..|++|++.+++.+..+.. . .+..++|+|++ ++
T Consensus 108 ~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~ 184 (347)
T 2gop_A 108 SLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IV 184 (347)
T ss_dssp EEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EE
T ss_pred ceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EE
Confidence 34568899988887642 5799999988876222333 3 78899999999 77
Q ss_pred EEeeCCC-------eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-------
Q psy8152 143 ATGGKEN-------DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ------- 208 (444)
Q Consensus 143 ~~~~~d~-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------- 208 (444)
+++..++ ...||.+.+++. ..+..+ . .+..+ +|+|++|+.++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~------------------~~~~~--spdg~~l~~~~~~~~~~~~~ 242 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-V------------------SFYAV--DSDGERILLYGKPEKKYMSE 242 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-E------------------SEEEE--EECSSCEEEEECCSSSCCCS
T ss_pred EEEecccccccccccccEEEeCCCce-EEeccC-c------------------ceeeE--CCCCCEEEEEEccccCCccc
Confidence 7776542 334444444433 222222 2 34444 9999888776644
Q ss_pred -ceEEEEEcCCCCCccceEEEeCCCCCeeE-EEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCC
Q psy8152 209 -GYVRVYDPKITTQRRPVLKVDIPDVALSC-ITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLN 286 (444)
Q Consensus 209 -~~i~i~d~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~ 286 (444)
..|.+|| . ......+..+...+.. +.|+ ++ ++++++.++.++|| +.+ ++....+ .+...|.+++|+|
T Consensus 243 ~~~l~~~d-~----~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~-g~~~~~~-~~~~~v~~~~~s~- 311 (347)
T 2gop_A 243 HNKLYIYD-G----KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD-GEIKPIA-KGRHWIMGFDVDE- 311 (347)
T ss_dssp SCEEEEEC-S----SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES-SSEEEEE-CSSSEEEEEEESS-
T ss_pred cceEEEEC-C----CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC-CceEEEe-cCCCeEEeeeeeC-
Confidence 3678887 4 2222223345667776 8999 88 88889999999999 886 7654444 4577899999999
Q ss_pred CCEEEEEECCCcE-EEEEcCCCc
Q psy8152 287 ENLILSVSLDRHF-RVHDFHSKK 308 (444)
Q Consensus 287 ~~~l~s~~~dg~i-~vw~~~~~~ 308 (444)
.++++++.++.. .||.+. ++
T Consensus 312 -~~~~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 312 -IVVYLKETATRLRELFTWD-GE 332 (347)
T ss_dssp -SEEEEEECSSSCCEEEEES-SS
T ss_pred -cEEEEEcCCCChHHheEeC-Cc
Confidence 677777777665 777776 54
No 177
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.78 E-value=1.3e-16 Score=146.13 Aligned_cols=265 Identities=11% Similarity=-0.002 Sum_probs=179.3
Q ss_pred CCcccEEEec----------CCCcEEEEEcCCCccceeeeeeecc-cCcccceEEEeeeccCCcEEEEEEc--CCeEEEE
Q psy8152 4 ADDYNIYIGS----------STGAFKGVNLSKDKCIIKNIQNVKY-ITNKASVLALNWGNVEESELLIAYS--GQKIKIY 70 (444)
Q Consensus 4 ~~~~~l~~g~----------~dg~i~i~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~~~~~--d~~i~vw 70 (444)
+++.++++++ .++.|.+||+.+.+. ...+..... ..+......++|+ |++++|+++.. ++.|.+|
T Consensus 59 pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-~~~i~~~~~~~~~g~~p~~i~~s-pdg~~l~v~n~~~~~~v~v~ 136 (361)
T 2oiz_A 59 NDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-EKEISLPPKRVQGLNYDGLFRQT-TDGKFIVLQNASPATSIGIV 136 (361)
T ss_dssp TTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-EEEEEECTTBCCBCCCGGGEEEC-TTSSEEEEEEESSSEEEEEE
T ss_pred CCCCEEEEEEecccccccCCCCCEEEEEECcCCcE-EEEEEcCccccccCCCcceEEEC-CCCCEEEEECCCCCCeEEEE
Confidence 4567777775 367899999887664 222221110 1134567889999 79999998875 5899999
Q ss_pred eCCCCccccc-eeeccccccEEEEEeCC-CeEEEEecCCcEEEEEcCC-CCccc------cccccCCCeEEEEEeccCCE
Q psy8152 71 DTDFKNFNTN-TDVSFGEGDIVGVSRYD-ECILTAVKSGDVKLWRYKT-EPDQW------TNFNVGPQLECMKHNKHSNI 141 (444)
Q Consensus 71 ~~~~~~~~~~-~~~~~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~-~~~~~------~~~~~~~~v~~~~~~~~~~~ 141 (444)
|+.+++.+.. +...+ .....+.|++ ..+++.+.||.+.+|++.. ++... .+.....+ ..+.+++++..
T Consensus 137 d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~ 213 (361)
T 2oiz_A 137 DVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDK 213 (361)
T ss_dssp ETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSE
T ss_pred ECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCE
Confidence 9999987766 54221 1113455655 5678888999999999865 44331 11112222 23444677777
Q ss_pred EEEeeCCCeEEEEEcCCceee--eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-----------C
Q psy8152 142 IATGGKENDLKLWDLNTTKNI--FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-----------Q 208 (444)
Q Consensus 142 l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------d 208 (444)
++..+.++.|.++|+...... ..+...........+.| .....++|+|+++.++++.. .
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p--------~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVP--------GGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEE--------CCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCcccccccccc--------CCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence 787888899999999754321 11111000000000000 11223789999877776543 3
Q ss_pred ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC--cceeEeccccCceeEEEecCC
Q psy8152 209 GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG--KPCYKYKGFAGCVKDIACPLN 286 (444)
Q Consensus 209 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~h~~~i~~~~~s~~ 286 (444)
+.|.+||+. ..+.+.++..+. +.+++|+|+|++|++++. +.|.+||+.+ + +.+.++..+......++++|+
T Consensus 286 ~~v~viD~~---t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t-~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 286 AEIWVMDTK---TKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ-PEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp SEEEEEETT---TTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS-SSCEEEEEETTSCSSEEEEEECCC
T ss_pred ceEEEEECC---CCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC-CcceeeEEeccCCCCcEEEEecCC
Confidence 589999999 788888888777 899999999999999887 9999999999 9 999998667777889999999
Q ss_pred CC
Q psy8152 287 EN 288 (444)
Q Consensus 287 ~~ 288 (444)
|+
T Consensus 359 G~ 360 (361)
T 2oiz_A 359 GG 360 (361)
T ss_dssp SC
T ss_pred CC
Confidence 85
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.78 E-value=4.1e-16 Score=156.25 Aligned_cols=246 Identities=8% Similarity=-0.045 Sum_probs=175.8
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCC-----eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCc------
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQ-----KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD------ 108 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~-----~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~------ 108 (444)
+|...+..++|| |++++|+.++.++ .|++||+.+++...... ......-.+++|+|+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~S-PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFS-EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEEC-TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccc
Confidence 455678999999 8999998776543 89999999988765322 2222344678999999999888766
Q ss_pred ----------EEEEEcCCCCccc----cccccCCCeEEEEEeccCCEEEEeeC-----CCeEEEEEcCC------ce-ee
Q psy8152 109 ----------VKLWRYKTEPDQW----TNFNVGPQLECMKHNKHSNIIATGGK-----ENDLKLWDLNT------TK-NI 162 (444)
Q Consensus 109 ----------i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~vwd~~~------~~-~~ 162 (444)
|++|++.+++... ....|...+..+.|+|++++|+.++. +..|++||+.+ +. ..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 9999998876321 11224556889999999999988765 57899999976 42 33
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCccceEEEeCCCC--Cee
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRRPVLKVDIPDV--ALS 236 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~--~i~ 236 (444)
..+..+.. .+.. .|+|+|+.|+..+. .+.|.+|++. +........+..+.. .+.
T Consensus 280 ~~l~~~~~------------------~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~~~ 339 (710)
T 2xdw_A 280 VKLIDNFE------------------GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT-DPEESKWKVLVPEHEKDVLE 339 (710)
T ss_dssp EEEECSSS------------------SCEE-EEEEETTEEEEEECTTCTTCEEEEEETT-SCCGGGCEEEECCCSSCEEE
T ss_pred EEeeCCCC------------------cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC-CCCcccceeccCCCCCCeEE
Confidence 44443333 2333 48888887776554 3469999998 222112344555543 678
Q ss_pred EEEEccCCCEEEEEcCCCc--EEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEE-E---CCCcEEEEEcCCCc
Q psy8152 237 CITTTNQSHYVIVGSTTGD--MMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSV-S---LDRHFRVHDFHSKK 308 (444)
Q Consensus 237 ~~~~~~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~-~---~dg~i~vw~~~~~~ 308 (444)
.++|++++.++++...++. |++|++.+ ++.+..+..+.+.|..+.++|++..|+.. + ..++|++||+.+++
T Consensus 340 ~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 340 WVACVRSNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEcCCEEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8999988888888888874 66677767 78788888788889999999998765533 2 34789999998876
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.77 E-value=6.7e-17 Score=146.34 Aligned_cols=226 Identities=8% Similarity=-0.017 Sum_probs=163.8
Q ss_pred CcEEEEEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccc
Q psy8152 107 GDVKLWRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDL 184 (444)
Q Consensus 107 g~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 184 (444)
+.|.+||..+++.+.... .+......++++|+++++++...++.|++|+..... .+..+..... .+...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~---------~g~~~ 139 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ---------PGSDQ 139 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB---------CCCST
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC---------CCCCc
Confidence 579999998888764332 244578999999999988888889999999986542 3443321110 00000
Q ss_pred cCccceeEEEEec-CCCEEEEEe-CCceEEEEEcCCCCCccceEEEeC----------CCCCeeEEEEccC-CCEEEEEc
Q psy8152 185 RRPVWVNGISFLP-NSDKVAVCS-KQGYVRVYDPKITTQRRPVLKVDI----------PDVALSCITTTNQ-SHYVIVGS 251 (444)
Q Consensus 185 ~~~~~i~~~~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~-~~~l~~~~ 251 (444)
.....+..|+++| ++.++++.+ .++.|++|+.. ...+..+.. +-.....|+++|+ ++++++..
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 1122588999999 788888886 69999999955 444544432 1133789999998 78888888
Q ss_pred CCCcEEEEEcCCCCcceeEec--cccCceeEEEecCCCCEEEEE-------ECCCcEEEEEcCCCceEEEee----cCCc
Q psy8152 252 TTGDMMAVDLRGKGKPCYKYK--GFAGCVKDIACPLNENLILSV-------SLDRHFRVHDFHSKKLLRKDY----MQSR 318 (444)
Q Consensus 252 ~dg~i~iwd~~~~~~~~~~~~--~h~~~i~~~~~s~~~~~l~s~-------~~dg~i~vw~~~~~~~~~~~~----~~~~ 318 (444)
.++.|++|+..+ ++.+..+. .+...+..++|+| +..+++. .....|++|++.+++++..+. +...
T Consensus 216 ~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~ 293 (329)
T 3fvz_A 216 ENGRIQCFKTDT-KEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDM 293 (329)
T ss_dssp TTTEEEEEETTT-CCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSS
T ss_pred CCCEEEEEECCC-CcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCC
Confidence 899999999998 88888885 4566788999999 4333333 334589999999999988863 4455
Q ss_pred eeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 319 LTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 319 i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
+..+++.+ ++.++++...++.|++|++..
T Consensus 294 p~~ia~~~---------dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 294 PHDIVASE---------DGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEECT---------TSEEEEEESSSCCEEEEEEEE
T ss_pred eeEEEECC---------CCCEEEEECCCCEEEEEeCCc
Confidence 78888764 456788888899999998764
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=4.3e-16 Score=138.85 Aligned_cols=241 Identities=6% Similarity=-0.079 Sum_probs=166.9
Q ss_pred CcccceEEEeeeccCCc-EEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152 40 TNKASVLALNWGNVEES-ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP 118 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 118 (444)
.+.....+++|+ |+++ +++++..++.|++|+..++ ...+..+.......+++++++++++...++.|.+|+..+++
T Consensus 25 ~~~~~~eg~~~d-~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYV-PARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEE-GGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred cCCccccCCeEe-CCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 455677899999 6887 7778888899999999876 44444322223334456788887777677899999998877
Q ss_pred ccccccc----cCCCeEEEEEeccCCEEEE----ee-------------CCCeEEEEEcCCceeeeeeecccceeeEeee
Q psy8152 119 DQWTNFN----VGPQLECMKHNKHSNIIAT----GG-------------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSV 177 (444)
Q Consensus 119 ~~~~~~~----~~~~v~~~~~~~~~~~l~~----~~-------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 177 (444)
....... ....+..++++|+|+++++ |+ ..+.|..++.. ++.. .+.....
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~------- 172 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRDRV------- 172 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECCCS-------
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecCCC-------
Confidence 5532211 1235678999999998887 33 13456556554 3332 2222222
Q ss_pred CCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc-cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcE
Q psy8152 178 KPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDM 256 (444)
Q Consensus 178 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 256 (444)
.+..++|+|+++.|++.+.++.|++|++...+.. .....+..+...+..++++++|+++++. ++.|
T Consensus 173 -----------~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 173 -----------KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp -----------SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred -----------CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeE
Confidence 4789999999998877788899999998611111 1122233345567789999999876666 7889
Q ss_pred EEEEcCCCCcceeEeccccCceeEEEe-cCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152 257 MAVDLRGKGKPCYKYKGFAGCVKDIAC-PLNENLILSVSLDRHFRVHDFHSKKL 309 (444)
Q Consensus 257 ~iwd~~~~~~~~~~~~~h~~~i~~~~~-s~~~~~l~s~~~dg~i~vw~~~~~~~ 309 (444)
.+|+.. ++.+..+..+.. +++++| .|+++.|++++.+ .+.-++..+.++
T Consensus 240 ~~~~~~--g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 240 HVLTPD--GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp EEECTT--SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred EEECCC--CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 999975 677888877766 899999 5898988888876 455566666554
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=3.7e-16 Score=138.54 Aligned_cols=230 Identities=8% Similarity=0.057 Sum_probs=167.0
Q ss_pred EEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc------ccCCCeEEEEEe-ccCCEEEEeeC-CCeEEEEEcCCceee
Q psy8152 91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF------NVGPQLECMKHN-KHSNIIATGGK-ENDLKLWDLNTTKNI 162 (444)
Q Consensus 91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~l~~~~~-d~~i~vwd~~~~~~~ 162 (444)
.++++++.++++...++.|++|+.. ++.+..+. .+...+..+++. +++.++++... ++.|++|+ .+++.+
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~ 112 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFV 112 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEE
T ss_pred EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEE
Confidence 4456788888888889999999987 44443222 233568899995 57766666543 78999999 556665
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--CCCCCeeEEEE
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--IPDVALSCITT 240 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~ 240 (444)
..+.... ...+.+++++|+++++++...++.|++|+.. ...+..+. .+...+..+++
T Consensus 113 ~~~~~~~-----------------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~p~~i~~ 171 (286)
T 1q7f_A 113 RKFGATI-----------------LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN----GNVLHKFGCSKHLEFPNGVVV 171 (286)
T ss_dssp EEECTTT-----------------CSCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEEECTTTCSSEEEEEE
T ss_pred EEecCcc-----------------CCCceEEEEeCCCCEEEEECCCCEEEEEcCC----CCEEEEeCCCCccCCcEEEEE
Confidence 5543211 1147899999999988888888999999966 34444443 34456889999
Q ss_pred ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc--cCceeEEEecCCCCEEEEEECCC-cEEEEEcCCCceEEEeecC-
Q psy8152 241 TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF--AGCVKDIACPLNENLILSVSLDR-HFRVHDFHSKKLLRKDYMQ- 316 (444)
Q Consensus 241 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h--~~~i~~~~~s~~~~~l~s~~~dg-~i~vw~~~~~~~~~~~~~~- 316 (444)
+|+|+++++...++.|++|+.. ++.+..+..+ ...+..++++++|+++++...++ .|++|+. .++.+..+...
T Consensus 172 ~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~ 248 (286)
T 1q7f_A 172 NDKQEIFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV 248 (286)
T ss_dssp CSSSEEEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS
T ss_pred CCCCCEEEEECCCCEEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC
Confidence 9999988888889999999974 5667666543 35788999999999888887776 9999995 46666655422
Q ss_pred --CceeEEEEcCCCcccccchhhhhccccccCCCccccCCCc
Q psy8152 317 --SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEH 356 (444)
Q Consensus 317 --~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~ 356 (444)
..+.++++.+ ++.++++ +.++.|++|++..
T Consensus 249 ~~~~~~~i~~~~---------~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 249 KHAQCFDVALMD---------DGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp CCSCEEEEEEET---------TTEEEEE-ETTTEEEEEECSC
T ss_pred CCCcceeEEECC---------CCcEEEE-CCCCeEEEEEccc
Confidence 2356777764 3566666 5689999998764
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=1.9e-15 Score=145.47 Aligned_cols=281 Identities=12% Similarity=0.002 Sum_probs=193.7
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC--CCccccceeec
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD--FKNFNTNTDVS 84 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~--~~~~~~~~~~~ 84 (444)
..+++...++.|.++|..+++. . ..+. ....+..+.|+ |++++|++++.++.|.+||+. +++.+..+..
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v-~---~~i~---~g~~p~~v~~S-pDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~- 238 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEI-K---TVLD---TGYAVHISRLS-ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI- 238 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCE-E---EEEE---CSSCEEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-
T ss_pred eEEEEeCCCCeEEEEECCCCeE-E---EEEe---CCCCccceEEC-CCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-
Confidence 4566677889999999988874 1 2222 23456789999 799999999999999999995 7777766653
Q ss_pred cccccEEEEE----eCCCeEEEEec-CCcEEEEEcCCCCccccccc----------c-----------------------
Q psy8152 85 FGEGDIVGVS----RYDECILTAVK-SGDVKLWRYKTEPDQWTNFN----------V----------------------- 126 (444)
Q Consensus 85 ~~~~~v~~~s----~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~----------~----------------------- 126 (444)
+....-.+++ |+|+++++++. .++|.++|..+.+.+..+.- |
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 3333446778 69998877765 58999999887766542110 0
Q ss_pred ----------------------CCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCceeeeeeec-ccceeeEeeeCCCcc
Q psy8152 127 ----------------------GPQLECMKHNKHSNIIATGG-KENDLKLWDLNTTKNIFSAKN-VSHRVLVYSVKPDEF 182 (444)
Q Consensus 127 ----------------------~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 182 (444)
.....++.|+|++++|+++. .++.|.++|+.+++.+..+.. ...
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~------------ 386 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT------------ 386 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS------------
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC------------
Confidence 01123557888888876655 578899999998877665543 111
Q ss_pred cccCccceeEEE-EecCC-CEEEEEe-CCceEEEEEcCCCCC-----ccceEEEeCCCCCeeEEEEccCCCEEEEEcC--
Q psy8152 183 DLRRPVWVNGIS-FLPNS-DKVAVCS-KQGYVRVYDPKITTQ-----RRPVLKVDIPDVALSCITTTNQSHYVIVGST-- 252 (444)
Q Consensus 183 ~~~~~~~i~~~~-~~~~~-~~l~~~~-~d~~i~i~d~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-- 252 (444)
.++ -..+. ++|++ ..++++. .++.|.++|.. ... .+.+.++......-..+..+|++++|++...
T Consensus 387 --Php--g~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~-~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 387 --PHP--GRGANFVHPTFGPVWATSHMGDDSVALIGTD-PEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLN 461 (567)
T ss_dssp --BCC--TTCEEEEETTTEEEEEEEBSSSSEEEEEECC-TTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTC
T ss_pred --CCC--ccceeeECCCCCcEEEeCCCCCCeEEEecCC-CCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCC
Confidence 011 11222 57875 4444543 46899999988 211 5667777755443355789999999998663
Q ss_pred -----CCcEEEEEcCCCC-----c-ceeEec--------cccCceeEEEecCCCCEEEEEE-----CCCcEEEEEcCCCc
Q psy8152 253 -----TGDMMAVDLRGKG-----K-PCYKYK--------GFAGCVKDIACPLNENLILSVS-----LDRHFRVHDFHSKK 308 (444)
Q Consensus 253 -----dg~i~iwd~~~~~-----~-~~~~~~--------~h~~~i~~~~~s~~~~~l~s~~-----~dg~i~vw~~~~~~ 308 (444)
.++|.++|+.+ . . .+..+. .-...+..+.|+|+|+++..+. .++.|.|+|..+++
T Consensus 462 ~~~~~~~~v~v~d~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 462 PEAEISGSVAVFDIKA-MTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SSHHHHTCEEEEEGGG-CCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCcccCceEEEEECCc-ccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 35899999987 5 1 223332 1134688999999998776653 37899999999999
Q ss_pred eEEEee
Q psy8152 309 LLRKDY 314 (444)
Q Consensus 309 ~~~~~~ 314 (444)
++.++.
T Consensus 541 ~~~~i~ 546 (567)
T 1qks_A 541 LKHVIK 546 (567)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 987765
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.76 E-value=1.6e-15 Score=137.52 Aligned_cols=255 Identities=8% Similarity=-0.019 Sum_probs=171.7
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG 86 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~ 86 (444)
..++....++.++.|. +. .+..+. .+...+.+++|+ +++.+++++..++.|++|+..+++...... .+
T Consensus 18 ~~~~~~~~~~~~~~~~---~~----~~~~~~--~~~~~~~~~~~~-~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~ 85 (333)
T 2dg1_A 18 NSAVPIISESELQTIT---AE----PWLEIS--KKGLQLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFV--SH 85 (333)
T ss_dssp GCSSCCCCGGGSCEEE---CE----EEEEEE--SSCCCEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEE--CS
T ss_pred cceeEEeecccCcccc---cc----eeEEEe--ccCccccCcEEC-CCCCEEEEECCCCEEEEEeCCCCcEEEEee--CC
Confidence 4455556777888882 11 122222 456678999999 788877788888999999998877655432 22
Q ss_pred cccEEEE--EeCCCeEEEEecC----CcEEEEEcCCCCccccc--cccCCCeEEEEEeccCCEEEEeeC------CCeEE
Q psy8152 87 EGDIVGV--SRYDECILTAVKS----GDVKLWRYKTEPDQWTN--FNVGPQLECMKHNKHSNIIATGGK------ENDLK 152 (444)
Q Consensus 87 ~~~v~~~--s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~ 152 (444)
...+.++ +++++++++...+ +.|.+|+..++.....+ ..+...+.+++++|+++++++... .+.|.
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 3445444 6788877776666 68999998877654212 124567999999999987776653 35566
Q ss_pred EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceE-----
Q psy8152 153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVL----- 226 (444)
Q Consensus 153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~----- 226 (444)
.++..+++....... .. .+..++|+|++++|+ +.+.++.|.+|++.. ....+.
T Consensus 166 ~~~~~~~~~~~~~~~-~~------------------~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~--~g~~~~~~~~~ 224 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQN-IS------------------VANGIALSTDEKVLWVTETTANRLHRIALED--DGVTIQPFGAT 224 (333)
T ss_dssp EECTTSCCEEEEEEE-ES------------------SEEEEEECTTSSEEEEEEGGGTEEEEEEECT--TSSSEEEEEEE
T ss_pred EEeCCCCEEEEeecC-CC------------------cccceEECCCCCEEEEEeCCCCeEEEEEecC--CCcCcccccce
Confidence 666654443322211 11 378899999998554 555678999999961 111111
Q ss_pred ---EEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccC------ceeEEEecCCCCEEEEEECCC
Q psy8152 227 ---KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAG------CVKDIACPLNENLILSVSLDR 297 (444)
Q Consensus 227 ---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~------~i~~~~~s~~~~~l~s~~~dg 297 (444)
.+..+ ..+..++++++|+++++...++.|.+|+. . ++.+..+..+.. .+.+++|+|+++.|+.++.++
T Consensus 225 ~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 225 IPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-R-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-T-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-C-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 11122 35788999999998888777889999998 4 666766654332 688999999987776666553
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.76 E-value=7.1e-16 Score=135.39 Aligned_cols=238 Identities=11% Similarity=0.057 Sum_probs=180.1
Q ss_pred CcEEEEEEcCCeEEEEeCCCCccccceeecc-ccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccccc-CCCeEE
Q psy8152 55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSF-GEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV-GPQLEC 132 (444)
Q Consensus 55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~v~~ 132 (444)
++.|++++.++.|++||.++++.+..+..+. ....-..+.|+|++|+ +.++.|+.||. +++.++.+..+ ...+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 7899999999999999999999998887533 1334456789999888 45778999999 78888755543 357889
Q ss_pred EEEeccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceE
Q psy8152 133 MKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYV 211 (444)
Q Consensus 133 ~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 211 (444)
+.+.++++++++.+. .+.|..++. .++.+..+..... . .....+...+++.+++++|++...++.|
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-----------~-~~~~~~~~~v~~~~~G~~lv~~~~~~~v 148 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG-----------I-ERPHAQFRQINKNKKGNYLVPLFATSEV 148 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS-----------C-SSGGGSCSCCEECTTSCEEEEETTTTEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC-----------C-CcccccccCceECCCCCEEEEecCCCEE
Confidence 999999999999887 778888875 5777766543211 0 0001135566789999999999999999
Q ss_pred EEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc------CceeEEEecC
Q psy8152 212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA------GCVKDIACPL 285 (444)
Q Consensus 212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~------~~i~~~~~s~ 285 (444)
..||.. ++.+.++... ..+.++.+.++++++++++.++.|..+|..+ ++.+.++..+. ..+..++..+
T Consensus 149 ~~~d~~----G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t-G~~~w~~~~~~~~~~~l~~~~~~~~~~ 222 (276)
T 3no2_A 149 REIAPN----GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLES-NRIVRRVNANDIEGVQLFFVAQLFPLQ 222 (276)
T ss_dssp EEECTT----SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTT-CCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred EEECCC----CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcC-CcEEEEecCCCCCCccccccccceEcC
Confidence 999976 6677777754 3456788889999999988888999999999 99999986432 2378888899
Q ss_pred CCCEEEEEECC--------CcEEEEEc-CCCceEEEee
Q psy8152 286 NENLILSVSLD--------RHFRVHDF-HSKKLLRKDY 314 (444)
Q Consensus 286 ~~~~l~s~~~d--------g~i~vw~~-~~~~~~~~~~ 314 (444)
+|+++++.... +..+++.+ .+++++..+.
T Consensus 223 ~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 223 NGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp TSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred CCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 99988887421 24467777 4677776654
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=3.3e-16 Score=137.59 Aligned_cols=242 Identities=6% Similarity=-0.081 Sum_probs=165.5
Q ss_pred ceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152 44 SVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT 122 (444)
Q Consensus 44 ~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 122 (444)
...+++++ +++.+++ +...++.|.+|+..+...............-.++.++++++++.. ++.|.+|+.........
T Consensus 25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 77899999 6888666 446779999999765543322111111233355677788666555 88999999876554422
Q ss_pred ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE
Q psy8152 123 NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV 202 (444)
Q Consensus 123 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 202 (444)
.......+..+++.++++++++...++.|.+|+..+............ .+.+++++|+++++
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~------------------~p~~i~~~~~g~l~ 164 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN------------------DPDGVAVDNSGNVY 164 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC------------------SCCCEEECTTCCEE
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCC------------------CceeEEEeCCCCEE
Confidence 223336789999999998888777788999997655433221111111 47789999999987
Q ss_pred EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE
Q psy8152 203 AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA 282 (444)
Q Consensus 203 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~ 282 (444)
++...++.|.+|+.. ..........+...+..++++++|.++++...++.|.+|+... .........+...+.+++
T Consensus 165 v~~~~~~~i~~~~~~---~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~p~~i~ 240 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAE---SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS-TTSTVLPFTGLNTPLAVA 240 (270)
T ss_dssp EEEGGGTEEEEECTT---TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC-SCCEECCCCSCSCEEEEE
T ss_pred EEECCCCEEEEEecC---CCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC-CcceeeccCCCCCceeEE
Confidence 777778899999988 3332222222335678999999998888887888999999875 433322223345789999
Q ss_pred ecCCCCEEEEEECCCcEEEEEcCCCce
Q psy8152 283 CPLNENLILSVSLDRHFRVHDFHSKKL 309 (444)
Q Consensus 283 ~s~~~~~l~s~~~dg~i~vw~~~~~~~ 309 (444)
++++|+++++...++.|++|++...+.
T Consensus 241 ~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 241 VDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred ECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 999999888888999999999876554
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.76 E-value=2.4e-16 Score=157.45 Aligned_cols=247 Identities=10% Similarity=-0.018 Sum_probs=168.1
Q ss_pred CcccceEEEeeeccCCcEEEE-----EEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCc------
Q psy8152 40 TNKASVLALNWGNVEESELLI-----AYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD------ 108 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~-----~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~------ 108 (444)
+|...+.+++|| |++++||. |+.+..|++||+.+++.+.............+++|+|+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~S-PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 118 DGTVSLGTWAVS-WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SSCEEEEEEEEC-TTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCCEEEEEEEEC-CCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 566789999999 79999984 333468999999998876211112222245678999999999988766
Q ss_pred -------EEEEEcCCCCcc----ccccccCCCeEEEEEeccCCEEEEeeCCC----eEEEEEcCCceeeeeeecccceee
Q psy8152 109 -------VKLWRYKTEPDQ----WTNFNVGPQLECMKHNKHSNIIATGGKEN----DLKLWDLNTTKNIFSAKNVSHRVL 173 (444)
Q Consensus 109 -------i~iw~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~vwd~~~~~~~~~~~~~~~~~~ 173 (444)
|++|++.+++.. .....+...+..+.|+|+|++|+.++.++ .|.+|+..+++. ..+..+..
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~--- 272 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVG--- 272 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSS---
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCC---
Confidence 999999887632 12223456789999999999998887666 677776554433 23333322
Q ss_pred EeeeCCCcccccCccceeEEEEecCCCEEEEEe---CCceEEEEEcCCCCCccceEEEeCC--CCCeeEEEEccCCCEEE
Q psy8152 174 VYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS---KQGYVRVYDPKITTQRRPVLKVDIP--DVALSCITTTNQSHYVI 248 (444)
Q Consensus 174 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~ 248 (444)
.+....+ +++.+++.+. .++.|.+|++. +........+..+ ...+..++|+ ++.+++
T Consensus 273 ---------------~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~ 334 (695)
T 2bkl_A 273 ---------------AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA-KPARASWKEIVPEDSSASLLSVSIV-GGHLSL 334 (695)
T ss_dssp ---------------CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT-BCSGGGCEEEECCCSSCEEEEEEEE-TTEEEE
T ss_pred ---------------ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC-CCCccCCeEEecCCCCCeEEEEEEE-CCEEEE
Confidence 3555556 5566444443 25899999997 2221112333333 4457888888 677888
Q ss_pred EEcCCCcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCEEEEEE----CCCcEEEEEcCCCce
Q psy8152 249 VGSTTGDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENLILSVS----LDRHFRVHDFHSKKL 309 (444)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~l~s~~----~dg~i~vw~~~~~~~ 309 (444)
+...++..+||.+...++.+..+..+ .+.|..++++|+++.|+... ..++|++||+.+++.
T Consensus 335 ~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 335 EYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 88899988888665215666666654 66788889999987666332 347899999988764
No 187
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.75 E-value=2.3e-15 Score=136.05 Aligned_cols=294 Identities=11% Similarity=0.086 Sum_probs=202.6
Q ss_pred CCCcccEEEecC-----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCeE
Q psy8152 3 LADDYNIYIGSS-----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQKI 67 (444)
Q Consensus 3 ~~~~~~l~~g~~-----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~i 67 (444)
.++.+.+++... ++.|.++|..+.+. . ..+.. + ..+ .++++ |++++|+++. .++.|
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v-~---~~I~v-G-~~P--~va~s-pDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRV-I---GMIDG-G-FLP--NPVVA-DDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEE-E---EEEEE-C-SSC--EEEEC-TTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeE-E---EEEEC-C-CCC--cEEEC-CCCCEEEEEcccccccccCCCCCEE
Confidence 456677777765 68999999988875 2 22221 1 223 49999 7999888775 35789
Q ss_pred EEEeCCCCccccceeecc-------ccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEec-
Q psy8152 68 KIYDTDFKNFNTNTDVSF-------GEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK- 137 (444)
Q Consensus 68 ~vw~~~~~~~~~~~~~~~-------~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~- 137 (444)
.+||..+++.+..+.... ....-..++|+|++++++.. ++.|.++|+.+++.+..+ .-.+ |..+.|
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI-~v~g---~~~~~P~ 187 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML-DVPD---CYHIFPT 187 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE-ECCS---EEEEEEE
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE-ECCC---cceeecC
Confidence 999999999988876532 13445788999999888864 689999999999887643 2222 222334
Q ss_pred cCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccce-eEEEEe-cCCCEEEEEeCCceEEEE
Q psy8152 138 HSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV-NGISFL-PNSDKVAVCSKQGYVRVY 214 (444)
Q Consensus 138 ~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~-~~~~~l~~~~~d~~i~i~ 214 (444)
....+++.+.||.+.+.++.. ++....... -+.++. .++ ....|. ++|++++ .+.+|.|++.
T Consensus 188 g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~--------~~~~~~------~~~~~~~~~~~~dG~~~~-vs~~g~V~v~ 252 (386)
T 3sjl_D 188 APDTFFMHCRDGSLAKVAFGTEGTPEITHTE--------VFHPED------EFLINHPAYSQKAGRLVW-PTYTGKIHQI 252 (386)
T ss_dssp ETTEEEEEETTSCEEEEECCSSSCCEEEECC--------CCSCTT------SCBCSCCEEETTTTEEEE-EBTTSEEEEE
T ss_pred CCceeEEECCCCCEEEEECCCCCeEEEeecc--------eecccc------ccccccceeEcCCCcEEE-EeCCCEEEEE
Confidence 556777888899999999976 554321110 011110 012 123564 5665444 5568999999
Q ss_pred EcCCCCCccceEEEeC----------CCCCeeEEEEccCCCEEEEEcC----------CCcEEEEEcCCCCcceeEeccc
Q psy8152 215 DPKITTQRRPVLKVDI----------PDVALSCITTTNQSHYVIVGST----------TGDMMAVDLRGKGKPCYKYKGF 274 (444)
Q Consensus 215 d~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h 274 (444)
|+. +.....+..+.. ....+..++++|+++.|++... .+.|.++|+.+ ++.+.++..
T Consensus 253 d~~-~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v- 329 (386)
T 3sjl_D 253 DLS-SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM- 329 (386)
T ss_dssp ECT-TSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-
T ss_pred ECC-CCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-
Confidence 997 222222322220 0123445788999888887642 25799999999 999998873
Q ss_pred cCceeEEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEeecCCceeEEEEcCC
Q psy8152 275 AGCVKDIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSD 327 (444)
Q Consensus 275 ~~~i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~ 327 (444)
...+.+|+++++++ +|+++. .++.|.++|..+++.+.++...+..+.++++.+
T Consensus 330 g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 330 GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 23678999999996 666654 589999999999999999988887788877655
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=4.8e-16 Score=141.04 Aligned_cols=260 Identities=10% Similarity=0.026 Sum_probs=175.3
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW 121 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 121 (444)
...|.+++|+ ++...++..+.++.++.| .++....+........-.++++++++++++..++.|.+|+..+++...
T Consensus 5 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 5 QQDLPTLFYS-GKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp -CCCCBCCSC-GGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred ccccceeeec-CCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 3457888999 677777777778889999 233333332111122234456788888888889999999998887664
Q ss_pred cccccCCCeEEEEEeccCCEEEEeeCC----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152 122 TNFNVGPQLECMKHNKHSNIIATGGKE----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP 197 (444)
Q Consensus 122 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 197 (444)
....+...+.+++++|+++++++...+ +.|.+||..++.....+..... ...+.+++++|
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----------------~~~~~~i~~d~ 144 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST----------------AYCIDDMVFDS 144 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS----------------CCCEEEEEECT
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc----------------CCcccceEECC
Confidence 333566789999999999888877666 6899999887654322221111 12588999999
Q ss_pred CCCEEEEEeC------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcceeE
Q psy8152 198 NSDKVAVCSK------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKPCYK 270 (444)
Q Consensus 198 ~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~ 270 (444)
+++++++... .+.|..|+.. ... +..+......+..++|+|++++|+ +.+.++.|++|++...+..+..
T Consensus 145 ~g~l~v~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~ 220 (333)
T 2dg1_A 145 KGGFYFTDFRGYSTNPLGGVYYVSPD---FRT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP 220 (333)
T ss_dssp TSCEEEEECCCBTTBCCEEEEEECTT---SCC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEE
T ss_pred CCCEEEEeccccccCCCceEEEEeCC---CCE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccc
Confidence 9988776654 3556666655 222 222222233478899999998654 4566789999999641333322
Q ss_pred --------eccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC-------ceeEEEEcCC
Q psy8152 271 --------YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS-------RLTSILVRSD 327 (444)
Q Consensus 271 --------~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~-------~i~~~~~~~~ 327 (444)
+.++ ..+..++++++|+++++...++.|.+|+. .++.+..+.... .+.+++|.++
T Consensus 221 ~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~d 290 (333)
T 2dg1_A 221 FGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPG 290 (333)
T ss_dssp EEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred ccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCC
Confidence 1222 46788999999998888888899999998 466666655332 5788888644
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=1.7e-15 Score=136.86 Aligned_cols=267 Identities=7% Similarity=-0.036 Sum_probs=184.1
Q ss_pred cCCeEEEEeCCCCccccceeec----cccccEEEEEeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEec
Q psy8152 63 SGQKIKIYDTDFKNFNTNTDVS----FGEGDIVGVSRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK 137 (444)
Q Consensus 63 ~d~~i~vw~~~~~~~~~~~~~~----~~~~~v~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (444)
.++.|.+||..+++....+... ........+..++. ++++...++.|.+||..+++.+..+ ........+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i-~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRI-TGFTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEE-ECCSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEc-CCCCCCcEEEEeC
Confidence 3789999999998876644210 11123445544454 4555556799999999999987644 4556789999998
Q ss_pred cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEEEEc
Q psy8152 138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVYDP 216 (444)
Q Consensus 138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~ 216 (444)
+++++++...++.|.+||+.+++....+..... .........+++ ..++++++.. .++.|.+||+
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~-------------~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDM-------------DMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC-------------CTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc-------------cccCCCcceEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence 885444444789999999999887766654330 000002456777 4444444443 4889999999
Q ss_pred CCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC----------CcEEEEEcCCCCcceeEeccc-cCceeEEEecC
Q psy8152 217 KITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT----------GDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPL 285 (444)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~ 285 (444)
. ..+.+..+.... ....++++|+|++++++..+ +.|.+||..+ ++.+..+... ......++|+|
T Consensus 160 ~---t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~ 234 (328)
T 3dsm_A 160 E---TDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNG 234 (328)
T ss_dssp T---TTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECT
T ss_pred C---CCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEec
Confidence 8 666666666543 35789999999877776554 7899999998 8877776532 23678999999
Q ss_pred CCCEEEEEECCCcEEEEEcCCCceEEEee--c-CCceeEEEEcCCCcccccchhhhhcccc----ccCCCccccCCCccc
Q psy8152 286 NENLILSVSLDRHFRVHDFHSKKLLRKDY--M-QSRLTSILVRSDFSLENETKKEEQEHSE----EKGDSDEKYDPEHFE 358 (444)
Q Consensus 286 ~~~~l~s~~~dg~i~vw~~~~~~~~~~~~--~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~----~~d~~i~~W~~~~~~ 358 (444)
++++|+++.. .|.+||..++++..... . ......+++.++ .+.+.++. ..++.|.+|+.. ++
T Consensus 235 d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~--------~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 235 TRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPN--------NGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp TSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTT--------TCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred CCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCC--------CCeEEEEcccccccCCEEEEECCC-CC
Confidence 9998888755 89999999887643221 1 355778887753 23455555 568899999988 54
Q ss_pred cc
Q psy8152 359 MN 360 (444)
Q Consensus 359 ~~ 360 (444)
..
T Consensus 304 ~~ 305 (328)
T 3dsm_A 304 LI 305 (328)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.74 E-value=4.6e-14 Score=129.27 Aligned_cols=291 Identities=10% Similarity=-0.030 Sum_probs=192.1
Q ss_pred CCCcccEEEecC--CC---cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCeE
Q psy8152 3 LADDYNIYIGSS--TG---AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQKI 67 (444)
Q Consensus 3 ~~~~~~l~~g~~--dg---~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~i 67 (444)
+.+++++++... .. .|.+||..+++. +..+.. + ..+ .++|+ |++++|+++. .++.|
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~----~~~i~~-g-~~p--~i~~s-pDg~~lyv~n~~~~~~~rg~~~~~v 99 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSI----LGHVNG-G-FLP--NPVAA-HSGSEFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeE----EEEecC-C-CCC--CeEEC-CCCCEEEEEeccccccccCCCCCeE
Confidence 345567777764 33 789999988774 122221 1 222 99999 7999999886 36789
Q ss_pred EEEeCCCCccccceeec-------cccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEecc
Q psy8152 68 KIYDTDFKNFNTNTDVS-------FGEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH 138 (444)
Q Consensus 68 ~vw~~~~~~~~~~~~~~-------~~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~ 138 (444)
.+||..+.+.+..+... +....-..++|+|++|+++.. ++.|.++| .+++.+..+..... |+.+.|.
T Consensus 100 ~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---~~~~~~~ 175 (373)
T 2mad_H 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---CYHIHPG 175 (373)
T ss_pred EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---eEEEEeC
Confidence 99999988887776543 112334678999999998874 47899999 98887653133332 3455564
Q ss_pred C-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152 139 S-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK 217 (444)
Q Consensus 139 ~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 217 (444)
+ ..+++.+.||.+.+++. +++.+........ . ..+ .+ ......+.+++..++..+..+.+.+.|+.
T Consensus 176 ~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~--~---~~~------~p-~~~~~~~~~~~~~~~~~~~~~~v~vid~~ 242 (373)
T 2mad_H 176 APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAM--L---TAA------QN-LLTQPAQANKSGRIVWPVYSGKILQADIS 242 (373)
T ss_pred CCceEEEEcCCCCEEEEEC-CCcEEEEEecccc--c---cCC------cc-eeecceeEecCCEEEEEcCCceEEEEecc
Confidence 3 45667778999999999 7766533211000 0 000 00 12335567776555544577899999987
Q ss_pred CCCCccceEEEeCC----------CCCeeEEEEccCCCEEEEEcC----------CCcEEEEEcCCCCcceeEeccccCc
Q psy8152 218 ITTQRRPVLKVDIP----------DVALSCITTTNQSHYVIVGST----------TGDMMAVDLRGKGKPCYKYKGFAGC 277 (444)
Q Consensus 218 ~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h~~~ 277 (444)
......+..+... ......++++|+++.|+++.. .+.|.++|+.+ ++.+.++.. ...
T Consensus 243 -~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~ 319 (373)
T 2mad_H 243 -AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GHD 319 (373)
T ss_pred -CCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEEC-CCC
Confidence 2222222222210 122344789999888887543 35799999999 999888863 335
Q ss_pred eeEEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEe-ecCCceeEE
Q psy8152 278 VKDIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKD-YMQSRLTSI 322 (444)
Q Consensus 278 i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~-~~~~~i~~~ 322 (444)
..+++|+|+|+ +++++. .++.|.+||+.+++.+.++ ........+
T Consensus 320 p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~ 367 (373)
T 2mad_H 320 VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVL 367 (373)
T ss_pred cCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEE
Confidence 78999999999 777777 5899999999999998884 444443333
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=2.1e-15 Score=151.03 Aligned_cols=275 Identities=13% Similarity=0.090 Sum_probs=179.1
Q ss_pred cCCcEEEEEEcC-----CeEEEEeCCCCccccceee----ccccccE--EEEEeCCCeEEEEecCC-----cEEEEEcCC
Q psy8152 53 VEESELLIAYSG-----QKIKIYDTDFKNFNTNTDV----SFGEGDI--VGVSRYDECILTAVKSG-----DVKLWRYKT 116 (444)
Q Consensus 53 ~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~----~~~~~~v--~~~s~~~~~l~~~~~dg-----~i~iw~~~~ 116 (444)
|++.+++....+ +.+.+.+...++....+.. .++...+ .++||+|++|+.+...+ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 577777765433 2344444444443222211 1222223 45689999988776543 899999999
Q ss_pred CCccccccccCCCeEEEEEeccCCEEEEeeCCCe----------------EEEEEcCCcee--eeeeecccceeeEeeeC
Q psy8152 117 EPDQWTNFNVGPQLECMKHNKHSNIIATGGKEND----------------LKLWDLNTTKN--IFSAKNVSHRVLVYSVK 178 (444)
Q Consensus 117 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~vwd~~~~~~--~~~~~~~~~~~~~~~~~ 178 (444)
++.......+ ..+..++|+|+++.|+.++.++. |++|++.+++. ...+.....
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~-------- 231 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE-------- 231 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC--------
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC--------
Confidence 9876532322 23678999999999999887765 99999987652 111121111
Q ss_pred CCcccccCccceeEEEEecCCCEEEEEeC-----CceEEEEEcCCCCC------cc-ceEEEeCCCCCeeEEEEccCCCE
Q psy8152 179 PDEFDLRRPVWVNGISFLPNSDKVAVCSK-----QGYVRVYDPKITTQ------RR-PVLKVDIPDVALSCITTTNQSHY 246 (444)
Q Consensus 179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~------~~-~~~~~~~~~~~i~~~~~~~~~~~ 246 (444)
...+..+.|+|+|++|+.++. +..|++||+. . .. ....+..+...+.. .|+|+|..
T Consensus 232 --------~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~---~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~ 299 (710)
T 2xdw_A 232 --------PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ---QESNGITGILKWVKLIDNFEGEYD-YVTNEGTV 299 (710)
T ss_dssp --------TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG---GSSSSSCSSCCCEEEECSSSSCEE-EEEEETTE
T ss_pred --------CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc---ccccccCCccceEEeeCCCCcEEE-EEeccCCE
Confidence 125788999999998887764 6789999998 2 21 35556666555554 58888888
Q ss_pred EEEEcCC----CcEEEEEcCCCCc--ceeEeccccC--ceeEEEecCCCCEEEEEECCCc--EEEEEcCCCceEEEee-c
Q psy8152 247 VIVGSTT----GDMMAVDLRGKGK--PCYKYKGFAG--CVKDIACPLNENLILSVSLDRH--FRVHDFHSKKLLRKDY-M 315 (444)
Q Consensus 247 l~~~~~d----g~i~iwd~~~~~~--~~~~~~~h~~--~i~~~~~s~~~~~l~s~~~dg~--i~vw~~~~~~~~~~~~-~ 315 (444)
|+..+.. +.|.+|++.+ +. ....+..|.. .+..++|++++.++++...++. |++|++.+++.+..+. +
T Consensus 300 l~~~s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 300 FTFKTNRHSPNYRLINIDFTD-PEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp EEEEECTTCTTCEEEEEETTS-CCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC
T ss_pred EEEEECCCCCCCEEEEEeCCC-CCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC
Confidence 7765543 3699999987 54 2355555544 6888999887788888888885 5667776777666654 4
Q ss_pred CCceeEEEEcCCCcccccchhhhhcc----ccccCCCccccCCCccc
Q psy8152 316 QSRLTSILVRSDFSLENETKKEEQEH----SEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~----s~~~d~~i~~W~~~~~~ 358 (444)
.+.+..+.++++ +..++ +....+++.+|++.+++
T Consensus 379 ~~~v~~~~~s~d---------~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 379 VGSVVGYSGQKK---------DTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp SSEEEEEECCTT---------CSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CceEEEEecCCC---------CCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 445666665543 22232 33455778889887665
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=3.3e-15 Score=133.07 Aligned_cols=212 Identities=9% Similarity=0.011 Sum_probs=151.4
Q ss_pred EEEEEeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecc
Q psy8152 90 IVGVSRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNV 168 (444)
Q Consensus 90 v~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 168 (444)
-..++|+++ +++++..++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.+|+..+++........
T Consensus 32 g~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~ 109 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSF 109 (296)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEE
T ss_pred CCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeecc
Confidence 456678888 7888888999999999877 3345556778999999999998888777789999999777654332211
Q ss_pred cceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE----eC-------------CceEEEEEcCCCCCccceEEEeCC
Q psy8152 169 SHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC----SK-------------QGYVRVYDPKITTQRRPVLKVDIP 231 (444)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~~-------------d~~i~i~d~~~~~~~~~~~~~~~~ 231 (444)
.. .....++.++++|+|+++++. +. .+.|..++.. ..+..+..+
T Consensus 110 ~~--------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-----g~~~~~~~~ 170 (296)
T 3e5z_A 110 EG--------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-----GTLSAPIRD 170 (296)
T ss_dssp TT--------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-----SCEEEEECC
T ss_pred CC--------------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-----CCEEEeecC
Confidence 11 001136789999999988873 21 2344444432 223344556
Q ss_pred CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc---eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152 232 DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP---CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK 308 (444)
Q Consensus 232 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 308 (444)
......++|+|++++|++.+.++.|++|++...+.. ...+..+...+.+++++++|+++++. ++.|.+|+.. ++
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~ 247 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GD 247 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SC
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CC
Confidence 666789999999999888888899999999731544 23333345567889999999876665 8899999986 77
Q ss_pred eEEEeecCCceeEEEEc
Q psy8152 309 LLRKDYMQSRLTSILVR 325 (444)
Q Consensus 309 ~~~~~~~~~~i~~~~~~ 325 (444)
.+..+.....+.+++|.
T Consensus 248 ~~~~~~~~~~~~~~~f~ 264 (296)
T 3e5z_A 248 ELGRVLTPQTTSNLCFG 264 (296)
T ss_dssp EEEEEECSSCCCEEEEE
T ss_pred EEEEEECCCCceeEEEE
Confidence 77766644348888885
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.72 E-value=3.9e-14 Score=126.11 Aligned_cols=265 Identities=9% Similarity=-0.001 Sum_probs=176.3
Q ss_pred cEEEec-CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152 8 NIYIGS-STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG 86 (444)
Q Consensus 8 ~l~~g~-~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~ 86 (444)
.|+++. .++.|.+|+.. ++. ..+....+...+.++++. +++..+++...++.|..|+.. ++. ..+..+..
T Consensus 27 ~l~v~~~~~~~v~~~d~~-~~~-----~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~ 97 (299)
T 2z2n_A 27 KVWITQHKANMISCINLD-GKI-----TEYPLPTPDAKVMCLTIS-SDGEVWFTENAANKIGRITKK-GII-KEYTLPNP 97 (299)
T ss_dssp CEEEEETTTTEEEEECTT-CCE-----EEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCE-EEEECSST
T ss_pred CEEEEecCCCcEEEEcCC-CCe-----EEecCCcccCceeeEEEC-CCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCc
Confidence 344444 47889999877 542 222211345778999999 688877776667899999976 433 22322222
Q ss_pred cccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcccc-ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152 87 EGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWT-NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF 163 (444)
Q Consensus 87 ~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 163 (444)
...+.++ .+++.++++...++.|.+|+. +++.... .......+.++++.++++++++....+.|..|+. +++...
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~ 175 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE 175 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE
Confidence 3344444 567777777767889999998 5544421 2224567899999999988887777789999998 555432
Q ss_pred e-eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152 164 S-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242 (444)
Q Consensus 164 ~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~ 242 (444)
. +.... ..+.++++.++++++++....+.|.+|+.. .......+..+...+.++++++
T Consensus 176 ~~~~~~~------------------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~~~ 234 (299)
T 2z2n_A 176 FKIPTPA------------------SGPVGITKGNDDALWFVEIIGNKIGRITTS---GEITEFKIPTPNARPHAITAGA 234 (299)
T ss_dssp EECSSTT------------------CCEEEEEECTTSSEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECS
T ss_pred eeCCCCC------------------CcceeEEECCCCCEEEEccCCceEEEECCC---CcEEEEECCCCCCCceeEEECC
Confidence 1 11111 147899999999877777778899999985 2222222333456788999999
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCccee-EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCc
Q psy8152 243 QSHYVIVGSTTGDMMAVDLRGKGKPCY-KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKK 308 (444)
Q Consensus 243 ~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 308 (444)
+|+++++...++.|.+|+. . +.... .+..+...+.++++ +++.++++.. .+.|..++..+++
T Consensus 235 ~g~l~v~~~~~~~i~~~d~-~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 235 GIDLWFTEWGANKIGRLTS-N-NIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp TTCEEEEETTTTEEEEEET-T-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CCCEEEeccCCceEEEECC-C-CceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 9987777767889999998 4 44322 23345567899999 8888766654 5677777776543
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.72 E-value=7.2e-14 Score=124.37 Aligned_cols=255 Identities=9% Similarity=-0.030 Sum_probs=174.7
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
.+...+.++++. +++..+++...++.|.+|+.. ++.. .+....+...+.++ .+++.++++...++.|..|+.. +
T Consensus 12 ~~~~~~~~i~~d-~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 12 NQDTGPYGITVS-DKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp SSSCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CcCCCccceEEC-CCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 445788999999 788877766667899999987 5543 22222223445444 5677777776668889999976 3
Q ss_pred Cccccc-cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 118 PDQWTN-FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 118 ~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
+..... ......+.++++.+++.++++...++.|.+|+. +++.... ...... .+.++++
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~------------------~~~~i~~ 148 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGS------------------YPSFITL 148 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC------------------CEEEEEE
T ss_pred cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCC------------------CCceEEE
Confidence 332111 124557899999999988887777889999998 4443221 111111 4889999
Q ss_pred ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE-eccc
Q psy8152 196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK-YKGF 274 (444)
Q Consensus 196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~h 274 (444)
.++++++++....+.|..|+.. .......+......+..++++++++++++....+.|.+|+. + ++.... +..+
T Consensus 149 ~~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~ 223 (299)
T 2z2n_A 149 GSDNALWFTENQNNAIGRITES---GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S-GEITEFKIPTP 223 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T-CCEEEEECSST
T ss_pred cCCCCEEEEeCCCCEEEEEcCC---CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-C-CcEEEEECCCC
Confidence 9999888877778899999875 22111223334456789999999998777777889999998 6 554322 3334
Q ss_pred cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee---cCCceeEEEE
Q psy8152 275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY---MQSRLTSILV 324 (444)
Q Consensus 275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~---~~~~i~~~~~ 324 (444)
...+.+++++++|+++++...++.|.+|+. +++. ..+. ....+.++++
T Consensus 224 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~ 274 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF 274 (299)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE
T ss_pred CCCceeEEECCCCCEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEEe
Confidence 567899999999987776667889999998 4543 2332 2345677776
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=6.1e-15 Score=129.40 Aligned_cols=236 Identities=11% Similarity=0.045 Sum_probs=173.6
Q ss_pred CCcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcc-cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152 4 ADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNK-ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 4 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
.++++|++++.++.|++|+..+++.. ..+. .+. ..+.++.++ |++++|+ +.++.|+.||. +++.+..+.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~----w~~~--~~~~~~~~~~~~~-pdG~ilv--s~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIV----WEYP--LEKGWECNSVAAT-KAGEILF--SYSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEE----EEEE--CCTTCCCCEEEEC-TTSCEEE--ECBSEEEEECT-TSCEEEEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEE----EEeC--CCccCCCcCeEEC-CCCCEEE--eCCCCEEEECC-CCCEEEEEc
Confidence 45689999999999999999888741 2222 233 468899999 7898888 44688999999 799888876
Q ss_pred eccccccEE--EEEeCCCeEEEEec-CCcEEEEEcCCCCcccccc------ccCCCeEEEEEeccCCEEEEeeCCCeEEE
Q psy8152 83 VSFGEGDIV--GVSRYDECILTAVK-SGDVKLWRYKTEPDQWTNF------NVGPQLECMKHNKHSNIIATGGKENDLKL 153 (444)
Q Consensus 83 ~~~~~~~v~--~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 153 (444)
.. ....+. .+.++|+++++.+. .+.|..++. +++.++.+. .+......+++.++++++++...++.|..
T Consensus 73 ~~-~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~ 150 (276)
T 3no2_A 73 AP-AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 150 (276)
T ss_dssp CC-TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE
T ss_pred CC-CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE
Confidence 42 122343 44678999998877 777877775 566554222 12224556678889999999999999999
Q ss_pred EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-
Q psy8152 154 WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD- 232 (444)
Q Consensus 154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~- 232 (444)
||.. ++.+.++..... +.++.+.+++++++++..+++|..+|.. +++.+.++..+.
T Consensus 151 ~d~~-G~~~w~~~~~~~-------------------~~~~~~~~~g~~~v~~~~~~~v~~~d~~---tG~~~w~~~~~~~ 207 (276)
T 3no2_A 151 IAPN-GQLLNSVKLSGT-------------------PFSSAFLDNGDCLVACGDAHCFVQLNLE---SNRIVRRVNANDI 207 (276)
T ss_dssp ECTT-SCEEEEEECSSC-------------------CCEEEECTTSCEEEECBTTSEEEEECTT---TCCEEEEEEGGGS
T ss_pred ECCC-CCEEEEEECCCC-------------------ccceeEcCCCCEEEEeCCCCeEEEEeCc---CCcEEEEecCCCC
Confidence 9998 999988876433 6677888999999999989999999988 788888876332
Q ss_pred -----CCeeEEEEccCCCEEEEEc--CC------CcEEEEEcCCCCcceeEeccc
Q psy8152 233 -----VALSCITTTNQSHYVIVGS--TT------GDMMAVDLRGKGKPCYKYKGF 274 (444)
Q Consensus 233 -----~~i~~~~~~~~~~~l~~~~--~d------g~i~iwd~~~~~~~~~~~~~h 274 (444)
..+..++..++|+++++.+ .. +..+++.+...++.+.++..+
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~ 262 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDK 262 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCT
T ss_pred CCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCc
Confidence 2367888889999888763 21 234566663327888777643
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=5.9e-15 Score=129.52 Aligned_cols=236 Identities=8% Similarity=-0.048 Sum_probs=161.9
Q ss_pred EEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152 91 VGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS 169 (444)
Q Consensus 91 ~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 169 (444)
.++++++++++ +...++.|.+|+..+.........+...+.++++.++++++++.. ++.|.+|+....... .+....
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~ 106 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDG 106 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCS
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCC
Confidence 44567888666 446788999999766554322233445688999999988666655 889999998764432 221111
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV 249 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 249 (444)
...+.++++.|+++++++...++.|.+|+.. ..............+..++++|+|+++++
T Consensus 107 -----------------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 107 -----------------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAG---SKTQTVLPFTGLNDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp -----------------CSSEEEEEECTTCCEEEEEGGGTEEEEECTT---CCSCEECCCCSCCSCCCEEECTTCCEEEE
T ss_pred -----------------cCCCcceEECCCCCEEEEECCCCEEEEEECC---CceeEeeccccCCCceeEEEeCCCCEEEE
Confidence 0148899999999988887778899999765 33332222223345789999999998877
Q ss_pred EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEcCCC
Q psy8152 250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVRSDF 328 (444)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~~~~ 328 (444)
...++.|.+|+... .........+...+.+++++++|.++++...++.|.+|+........... ....+.++++.+
T Consensus 167 ~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~-- 243 (270)
T 1rwi_B 167 DTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS-- 243 (270)
T ss_dssp EGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT--
T ss_pred ECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC--
Confidence 77788999999876 55443333334678899999999877777778899999987655433222 224577887764
Q ss_pred cccccchhhhhccccccCCCccccCCCccc
Q psy8152 329 SLENETKKEEQEHSEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 329 ~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~ 358 (444)
++.+.++...++.|++++....+
T Consensus 244 -------~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 244 -------DRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp -------TCCEEEEEGGGTEEEEECCCGGG
T ss_pred -------CCCEEEEECCCCEEEEEcCCCcc
Confidence 35677788889999999887544
No 197
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.69 E-value=2.4e-14 Score=131.87 Aligned_cols=284 Identities=10% Similarity=0.014 Sum_probs=192.9
Q ss_pred CCCCcccEEEecCC-----CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCe
Q psy8152 2 TLADDYNIYIGSST-----GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQK 66 (444)
Q Consensus 2 s~~~~~~l~~g~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~ 66 (444)
.+.+...+++.... +.|.++|..+.+. . ..+.. + ..+ .++++ |++++|+++. .++.
T Consensus 80 p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~v-v---~~I~v-G-~~P--gia~S-pDgk~lyVan~~~~~~~~G~~~~~ 150 (426)
T 3c75_H 80 PAPDARRVYIQDPAHFAAITQQFVIDGSTGRI-L---GMTDG-G-FLP--HPVAA-EDGSFFAQASTVFERIARGKRTDY 150 (426)
T ss_dssp CCCCTTEEEEEECTTTCSSEEEEEEETTTTEE-E---EEEEE-C-SSC--EEEEC-TTSSCEEEEEEEEEETTEEEEEEE
T ss_pred CCCCCCEEEEECCCcCCCCCeEEEEECCCCEE-E---EEEEC-C-CCC--ceEEC-CCCCEEEEEeccccccccCCCCCE
Confidence 44566667776553 6999999988875 2 22222 2 223 89999 7999888876 3678
Q ss_pred EEEEeCCCCccccceeec-------cccccEEEEEeCCCeEEEEec--CCcEEEEEcCCCCccccccccCCCeEEEEEec
Q psy8152 67 IKIYDTDFKNFNTNTDVS-------FGEGDIVGVSRYDECILTAVK--SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNK 137 (444)
Q Consensus 67 i~vw~~~~~~~~~~~~~~-------~~~~~v~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (444)
|.++|..+++.+..+... +....-..++|+|++|+++.. ++.|.+.|+.+++.+..+. -.. +....|
T Consensus 151 VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~-v~g---~~~~~p 226 (426)
T 3c75_H 151 VEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD-VPD---CYHIFP 226 (426)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCS---EEEEEE
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE-cCC---ceeecc
Confidence 999999999998887653 122344678999999998874 5789999999988775332 222 133445
Q ss_pred -cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEc
Q psy8152 138 -HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDP 216 (444)
Q Consensus 138 -~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 216 (444)
....+++.+.||.+.+.++.+++...... . .+.... .+ ....+.|.+++..++..+..+.|.+.|+
T Consensus 227 ~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~---~-----~~~v~~----~p-~~~~~~~~~dg~~~~~~s~~g~V~ViD~ 293 (426)
T 3c75_H 227 ASPTVFYMNCRDGSLARVDFADGETKVTNT---E-----VFHTED----EL-LINHPAFSLRSGRLVWPTYTGKIFQADL 293 (426)
T ss_dssp EETTEEEEEETTSSEEEEECCTTCCEEEEC---C-----CCSCTT----SC-BCSCCEECTTTCEEEEEBTTSEEEEEEE
T ss_pred CCCcEEEEEcCCCCEEEEECCCCcEEEEee---e-----eeccCC----Cc-eeeEeeecCCCCEEEEEeCCCcEEEEec
Confidence 33566777788888888885555442211 0 000000 00 1123567888887777778899999998
Q ss_pred CCCCCccceEEEeCC----------CCCeeEEEEccCCCEEEEEcC----------CCcEEEEEcCCCCcceeEeccccC
Q psy8152 217 KITTQRRPVLKVDIP----------DVALSCITTTNQSHYVIVGST----------TGDMMAVDLRGKGKPCYKYKGFAG 276 (444)
Q Consensus 217 ~~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h~~ 276 (444)
. ......+..+... ......++++|+++.+++... .+.|.++|+.+ .+.+.++... .
T Consensus 294 ~-~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~vg-~ 370 (426)
T 3c75_H 294 T-AEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIELG-H 370 (426)
T ss_dssp C-SSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEE-E
T ss_pred c-CCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC-CeEEEEEECC-C
Confidence 6 1111111111100 111234789999887777532 35799999999 9999998742 2
Q ss_pred ceeEEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEee
Q psy8152 277 CVKDIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 277 ~i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~~ 314 (444)
...+++|+|+++ +++++. .++.|.|+|+.+++.+.++.
T Consensus 371 ~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~ 410 (426)
T 3c75_H 371 EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVD 410 (426)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEec
Confidence 578999999998 888888 58999999999999998873
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=5.9e-15 Score=147.44 Aligned_cols=272 Identities=10% Similarity=-0.008 Sum_probs=171.0
Q ss_pred cCCcEEEEEEcCC---eEEEE--eCCCCccccceee----ccccccE--EEEEeCCCeEEEE-----ecCCcEEEEEcCC
Q psy8152 53 VEESELLIAYSGQ---KIKIY--DTDFKNFNTNTDV----SFGEGDI--VGVSRYDECILTA-----VKSGDVKLWRYKT 116 (444)
Q Consensus 53 ~~~~~l~~~~~d~---~i~vw--~~~~~~~~~~~~~----~~~~~~v--~~~s~~~~~l~~~-----~~dg~i~iw~~~~ 116 (444)
+++.+++....++ .-.|| +...+.....+.. .+|...+ .++||+|++|+.+ +.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 5788888766543 34444 4444443333221 1233234 4568999998843 3346899999999
Q ss_pred CCcc-ccccccCCCeEEEEEeccCCEEEEeeCCCe-------------EEEEEcCCce----eeeeeecccceeeEeeeC
Q psy8152 117 EPDQ-WTNFNVGPQLECMKHNKHSNIIATGGKEND-------------LKLWDLNTTK----NIFSAKNVSHRVLVYSVK 178 (444)
Q Consensus 117 ~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~vwd~~~~~----~~~~~~~~~~~~~~~~~~ 178 (444)
++.+ ..... ......++|+|+++.|+.++.+.. |++|++.+++ .+.....+..
T Consensus 157 g~~~~~~~~~-~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~-------- 227 (695)
T 2bkl_A 157 GEWSKVDVIE-GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPT-------- 227 (695)
T ss_dssp CCBCSSCCBS-CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTT--------
T ss_pred CCCcCCcccC-cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCE--------
Confidence 8865 21111 111268999999999999988776 9999998865 3333222222
Q ss_pred CCcccccCccceeEEEEecCCCEEEEEeCCc----eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc---
Q psy8152 179 PDEFDLRRPVWVNGISFLPNSDKVAVCSKQG----YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS--- 251 (444)
Q Consensus 179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--- 251 (444)
.+.++.|+|+|++|+.++.++ .|++|+.. .. ....+..+...+....+ ++|.+++.+.
T Consensus 228 ----------~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~---~~-~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~ 292 (695)
T 2bkl_A 228 ----------TFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG---EK-DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGA 292 (695)
T ss_dssp ----------CEEEEEECTTSCCEEEEEEETTTEEEEEEECTT---CS-SCEEEEECSSCCEEEEE-ETTEEEEEECTTC
T ss_pred ----------EEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC---CC-ceEEeecCCCceEEEEe-cCCcEEEEECCCC
Confidence 588999999998888776555 66777654 22 33444445555666666 5666444443
Q ss_pred CCCcEEEEEcCCCCcc--eeEeccc--cCceeEEEecCCCCEEEEEECCCcEEEEEcC-CCceEEEeec--CCceeEEEE
Q psy8152 252 TTGDMMAVDLRGKGKP--CYKYKGF--AGCVKDIACPLNENLILSVSLDRHFRVHDFH-SKKLLRKDYM--QSRLTSILV 324 (444)
Q Consensus 252 ~dg~i~iwd~~~~~~~--~~~~~~h--~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~-~~~~~~~~~~--~~~i~~~~~ 324 (444)
.++.|.+|++.+ +.. ...+..| ...+..++|+ ++.++++...++..+||.+. .++.+..+.. ...+..+.+
T Consensus 293 ~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~ 370 (695)
T 2bkl_A 293 PRQRVFEVDPAK-PARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMG 370 (695)
T ss_dssp TTCEEEEEBTTB-CSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBS
T ss_pred CCCEEEEEeCCC-CCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeec
Confidence 257899999987 553 2334333 4567888888 67788899999998888665 3555454432 333444433
Q ss_pred cCCCcccccchhhhhcc----ccccCCCccccCCCcccc
Q psy8152 325 RSDFSLENETKKEEQEH----SEEKGDSDEKYDPEHFEM 359 (444)
Q Consensus 325 ~~~~~~~~~~~~~~~~~----s~~~d~~i~~W~~~~~~~ 359 (444)
+ +++..++ +....+++.+|++.+++.
T Consensus 371 s---------~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 371 L---------EDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp C---------TTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred C---------CCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3 2333444 445567899999877654
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.67 E-value=2.8e-14 Score=143.59 Aligned_cols=246 Identities=9% Similarity=-0.043 Sum_probs=162.6
Q ss_pred CcccceEEEeeeccCCcEEEEEEcC-----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCc------
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSG-----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD------ 108 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~------ 108 (444)
+|...+..++|| |++++|+.++.+ ..|++||+.+++.+.. ........-.+++|+ +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~S-PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 160 DGATALDAWAAS-DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp ---EEEEEEEEC-TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC------
T ss_pred CCCEEEEeEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccccc
Confidence 444578999999 799999887654 4699999999887543 111111134567899 88888876654
Q ss_pred --------EEEEEcCCCCccc--ccc--ccCCCeEEEEEeccCCEEEEeeCCC-----eEEEEEcCCc--eeeeeeeccc
Q psy8152 109 --------VKLWRYKTEPDQW--TNF--NVGPQLECMKHNKHSNIIATGGKEN-----DLKLWDLNTT--KNIFSAKNVS 169 (444)
Q Consensus 109 --------i~iw~~~~~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~--~~~~~~~~~~ 169 (444)
|++|++.++.... .+. .+...+..+.|+|+|++|+..+.++ .|++||+.++ ++...+....
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 316 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL 316 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC
Confidence 8899987765321 111 2334588999999999988877544 8999999876 3133333332
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH 245 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 245 (444)
. .+... ++|+++.|+..+. ++.|.+|++. .........+..+...+..++|+ ++.
T Consensus 317 ~------------------~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~-~~~~~~~~l~~~~~~~l~~~~~~-~~~ 375 (741)
T 1yr2_A 317 K------------------AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS-GSTPRFDTVVPESKDNLESVGIA-GNR 375 (741)
T ss_dssp S------------------SCEEE-EEEETTEEEEEECTTCTTCEEEEEECS-SSSCEEEEEECCCSSEEEEEEEE-BTE
T ss_pred C------------------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC-CCccccEEEecCCCCeEEEEEEE-CCE
Confidence 2 23344 3488888877665 4569999988 11112222234444556677887 566
Q ss_pred EEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEE-EEE---CCCcEEEEEcCCCce
Q psy8152 246 YVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLIL-SVS---LDRHFRVHDFHSKKL 309 (444)
Q Consensus 246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~-s~~---~dg~i~vw~~~~~~~ 309 (444)
++++...++..+||.+...+..+..+.. +.+.|..+.++|+++.|+ +.+ ..++|++||+.+++.
T Consensus 376 lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 376 LFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7788888888777765421566666664 367788999999987555 322 347899999988763
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.66 E-value=1.3e-13 Score=132.78 Aligned_cols=250 Identities=11% Similarity=0.040 Sum_probs=172.3
Q ss_pred CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcC--CCCccccccccCCCeE
Q psy8152 54 EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYK--TEPDQWTNFNVGPQLE 131 (444)
Q Consensus 54 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~ 131 (444)
.+.++++...++.|.++|..+++.+..+.. +.......++|+++++++++.++.|.+||+. +++.+.. ........
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~-i~~G~~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE-IKIGSEAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE-EECCSEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE-EecCCCCc
Confidence 345566667789999999999999888763 3233456789999999999999999999995 6666643 33344578
Q ss_pred EEEEe----ccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEE
Q psy8152 132 CMKHN----KHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVC 205 (444)
Q Consensus 132 ~~~~~----~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 205 (444)
.++|+ |+|++++++.. .+.|.++|..+.+.+..+......+....++| ...+..+..++++. +++..
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p-------~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHP-------EPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEES-------CCCEEEEEECSSSSEEEEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccC-------CCceEEEEEcCCCCEEEEEe
Confidence 99999 69998887765 58999999999888876653221000000111 11477888888774 45555
Q ss_pred eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEecc-----ccCcee
Q psy8152 206 SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKYKG-----FAGCVK 279 (444)
Q Consensus 206 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~-----h~~~i~ 279 (444)
...|.|.++|.. ......+..+. .......+.|+|++++|+++ ..++.|.++|+.+ ++.+..+.. |.+.-.
T Consensus 317 ~~~g~v~~vd~~-~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t-~kl~~~i~vgg~~Phpg~g~ 393 (567)
T 1qks_A 317 KETGKILLVDYT-DLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKE-GKLVAIEDTGGQTPHPGRGA 393 (567)
T ss_dssp TTTTEEEEEETT-CSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSSBCCTTCE
T ss_pred cCCCeEEEEecC-CCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCC-CcEEEEEeccCcCCCCccce
Confidence 677999999988 22222233333 33456788999999988764 4678899999999 887776653 322121
Q ss_pred EEEecCCCC-EEEEEE-CCCcEEEEEcCC-------CceEEEeecC
Q psy8152 280 DIACPLNEN-LILSVS-LDRHFRVHDFHS-------KKLLRKDYMQ 316 (444)
Q Consensus 280 ~~~~s~~~~-~l~s~~-~dg~i~vw~~~~-------~~~~~~~~~~ 316 (444)
.+ ++|++. +++++. .++.|.+++..+ .+.+.++...
T Consensus 394 ~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~ 438 (567)
T 1qks_A 394 NF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL 438 (567)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred ee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC
Confidence 22 578754 444443 468999999988 5666666543
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=6.1e-13 Score=118.38 Aligned_cols=264 Identities=10% Similarity=0.012 Sum_probs=174.3
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF 85 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~ 85 (444)
+...++...++.|.+|+.. ++. . .+....+...+.++++. +++..+++...++.|.+|+.. ++.. .+....
T Consensus 31 g~l~v~~~~~~~v~~~~~~-~~~--~---~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~ 101 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQS-GRI--K---EFEVPTPDAKVMCLIVS-SLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQ 101 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCE--E---EEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEE-EEECSS
T ss_pred CCEEEEcCCCCeEEEECCC-Cce--E---EEECCCCCCcceeEEEC-CCCCEEEEecCCCeEEEECCC-CCeE-EecCCC
Confidence 3444444467889999877 542 1 12111344678999999 688777766667899999987 5543 333222
Q ss_pred ccccEEEE--EeCCCeEEEEecCCcEEEEEcCCCCcccc-ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152 86 GEGDIVGV--SRYDECILTAVKSGDVKLWRYKTEPDQWT-NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI 162 (444)
Q Consensus 86 ~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~ 162 (444)
....+.++ .++++++++...++.|..|+.. ++.... .......+.++++.++++++++....+.|..|+. +++..
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 22344444 5677777776668899999987 554421 2224567899999999987777666788999998 44433
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN 242 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~ 242 (444)
. +..... ...+.++++.++++++++....+.|.+|+.. .......+..+...+.++++++
T Consensus 180 ~-~~~~~~----------------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~d~ 239 (300)
T 2qc5_A 180 E-YPLPTN----------------AAAPVGITSGNDGALWFVEIMGNKIGRITTT---GEISEYDIPTPNARPHAITAGK 239 (300)
T ss_dssp E-EECSST----------------TCCEEEEEECTTSSEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECS
T ss_pred E-eeCCCC----------------CCCcceEEECCCCCEEEEccCCCEEEEEcCC---CcEEEEECCCCCCCceEEEECC
Confidence 2 211111 1148899999999887777777889999975 2222222333455688999999
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCcce-eEeccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 243 QSHYVIVGSTTGDMMAVDLRGKGKPC-YKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 243 ~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
+|+++++...++.|..|+. . +... ..+......+.++++.++|+++++.. . .|..++.
T Consensus 240 ~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 240 NSEIWFTEWGANQIGRITN-D-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TTCEEEEETTTTEEEEECT-T-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCCEEEeccCCCeEEEECC-C-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 9987777767789999998 4 4433 22333445688999999988666544 4 6666664
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.65 E-value=5.4e-14 Score=127.09 Aligned_cols=279 Identities=14% Similarity=-0.020 Sum_probs=192.3
Q ss_pred EeeeccCCcEEEEEEc-----CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEEEE
Q psy8152 48 LNWGNVEESELLIAYS-----GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVKLW 112 (444)
Q Consensus 48 ~~~~~~~~~~l~~~~~-----d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~iw 112 (444)
.... |+++.+++... ++.|.++|..+++.+..+... .. +-..++|++++++++. .++.|.+|
T Consensus 38 ~~~~-pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~-P~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPA-PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FL-PNPVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCC-CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SS-CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccC-CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CC-CcEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 3444 78888888765 679999999999999888643 23 3388899999887775 36789999
Q ss_pred EcCCCCcccccccc-------CCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc
Q psy8152 113 RYKTEPDQWTNFNV-------GPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD 183 (444)
Q Consensus 113 ~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (444)
|..+.+.+..+.-. ......++|+|+|++|+++.. ++.|.++|+.+++.+.++.....
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~------------- 181 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC------------- 181 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-------------
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-------------
Confidence 99998877643211 234668999999999998864 68999999999998887743211
Q ss_pred ccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC----CCCee-EEEEc-cCCCEEEEEcCCCcEE
Q psy8152 184 LRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP----DVALS-CITTT-NQSHYVIVGSTTGDMM 257 (444)
Q Consensus 184 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~i~-~~~~~-~~~~~l~~~~~dg~i~ 257 (444)
...+....+.+++.+.||++.+.++.. ..+.......+ ..++. ...|. ++|++++ .+.+|.|+
T Consensus 182 --------~~~~P~g~~~~~~~~~DG~~~~v~~~~--~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~ 250 (386)
T 3sjl_D 182 --------YHIFPTAPDTFFMHCRDGSLAKVAFGT--EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIH 250 (386)
T ss_dssp --------EEEEEEETTEEEEEETTSCEEEEECCS--SSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEE
T ss_pred --------ceeecCCCceeEEECCCCCEEEEECCC--CCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEE
Confidence 112322336677778888888888871 12222211111 12222 24664 6776655 45589999
Q ss_pred EEEcCCCCc--ceeEec---------c-ccCceeEEEecCCCCEEEEEEC----------CCcEEEEEcCCCceEEEeec
Q psy8152 258 AVDLRGKGK--PCYKYK---------G-FAGCVKDIACPLNENLILSVSL----------DRHFRVHDFHSKKLLRKDYM 315 (444)
Q Consensus 258 iwd~~~~~~--~~~~~~---------~-h~~~i~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~~~~~~~~~~ 315 (444)
++|+.. .. .+..+. + .......++++|+++.|+.... ...|.+.|+.+++.+.++..
T Consensus 251 v~d~~~-~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v 329 (386)
T 3sjl_D 251 QIDLSS-GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM 329 (386)
T ss_dssp EEECTT-SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred EEECCC-CcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC
Confidence 999976 43 333332 0 1233455788999988777643 25799999999999999998
Q ss_pred CCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCcccccc
Q psy8152 316 QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMNQ 361 (444)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~~ 361 (444)
..++++++++++- +..++++...++.|.++|..+++...
T Consensus 330 g~~~~~lavs~D~-------~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 330 GHEIDSINVSQDE-------KPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEECEEEECSSS-------SCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CCCcceEEECCCC-------CeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 8889999998662 11234445568999999998776544
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=1.1e-12 Score=116.72 Aligned_cols=257 Identities=8% Similarity=-0.040 Sum_probs=173.8
Q ss_pred CcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcCCC
Q psy8152 40 TNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~~~ 117 (444)
.....+.+|++. +++..+++...++.|.+|+.. ++... +....+...+.++ .+++.++++...++.|..|+.. +
T Consensus 17 ~~~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 17 IPDSGPYGITSS-EDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp STTCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCcceeeEC-CCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 345678999999 688877776678999999987 55443 3322223445554 4667777766667889999987 5
Q ss_pred Ccccc-ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee-eeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 118 PDQWT-NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF-SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 118 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
+.... .......+.++++.++++++++...++.|..|+.. ++... .+..... .+.++++
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~------------------~~~~i~~ 153 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGS------------------YPAFITL 153 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTC------------------CEEEEEE
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCC------------------CceeEEE
Confidence 54321 11234678999999999888877778899999987 54332 1211111 4889999
Q ss_pred ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeE-eccc
Q psy8152 196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYK-YKGF 274 (444)
Q Consensus 196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~h 274 (444)
.++++++++....+.|..|+.. .......+......+..+++.++++++++....+.|.+|+. . +..... +..+
T Consensus 154 d~~g~l~v~~~~~~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~ 228 (300)
T 2qc5_A 154 GSDNALWFTENQNNSIGRITNT---GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-T-GEISEYDIPTP 228 (300)
T ss_dssp CTTSSEEEEETTTTEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T-CCEEEEECSST
T ss_pred CCCCCEEEEecCCCeEEEECCC---CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-C-CcEEEEECCCC
Confidence 9999977777668899999875 22222222334456889999999988877777788999998 4 444332 3344
Q ss_pred cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE-ee-cCCceeEEEEc
Q psy8152 275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK-DY-MQSRLTSILVR 325 (444)
Q Consensus 275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~-~~-~~~~i~~~~~~ 325 (444)
...+.++++.++++++++...++.|..|+. +++.... +. ....+.++++.
T Consensus 229 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~ 280 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFG 280 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEEC
T ss_pred CCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeC
Confidence 567889999999987776666789999998 4544321 11 22345555554
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.65 E-value=1.9e-13 Score=122.62 Aligned_cols=241 Identities=8% Similarity=0.005 Sum_probs=162.2
Q ss_pred ccceEEEeeeccCCcEEEE-------EEcCCeEEEEeCCCCcccccee--eccccccEEEE--EeCCCeEEEEecCCcEE
Q psy8152 42 KASVLALNWGNVEESELLI-------AYSGQKIKIYDTDFKNFNTNTD--VSFGEGDIVGV--SRYDECILTAVKSGDVK 110 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~-------~~~d~~i~vw~~~~~~~~~~~~--~~~~~~~v~~~--s~~~~~l~~~~~dg~i~ 110 (444)
-....+++|+ +++.++++ +..++.|.+|+..+++...... ..++...+.++ ++++..|+.++..+.|.
T Consensus 17 ~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLL 95 (314)
T ss_dssp CTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEE
T ss_pred CCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEE
Confidence 4566899999 78887777 6778999999988777643211 00123345454 56623444444455799
Q ss_pred EEEcCCCCccccc-cc-----cCCCeEEEEEeccCCEEEEeeCC---------------CeEEEEEcCCceeeeeeeccc
Q psy8152 111 LWRYKTEPDQWTN-FN-----VGPQLECMKHNKHSNIIATGGKE---------------NDLKLWDLNTTKNIFSAKNVS 169 (444)
Q Consensus 111 iw~~~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~vwd~~~~~~~~~~~~~~ 169 (444)
+|+.. ++... + .. ....+.++++.++++++++...+ +.|..|+.. ++.........
T Consensus 96 ~~d~~-g~~~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEE-IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ 172 (314)
T ss_dssp EEETT-SCEEE-CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES
T ss_pred EEeCC-CCEEE-EEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC
Confidence 99988 66542 2 21 12358899999999888776654 567777765 44332222111
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEe----cCCCEEE-EEeCCceEEEEEcCCCCCc---cceEEEeCCC-CCeeEEEE
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFL----PNSDKVA-VCSKQGYVRVYDPKITTQR---RPVLKVDIPD-VALSCITT 240 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~-~~~~d~~i~i~d~~~~~~~---~~~~~~~~~~-~~i~~~~~ 240 (444)
....++|+ |+++.|+ +...++.|.+|++...... .....+..+. ..+..+++
T Consensus 173 -------------------~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 173 -------------------FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp -------------------SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred -------------------CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 36789999 9986554 4456889999997511111 1222233333 55788999
Q ss_pred ccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEE-EEECCCcEEEEEcCC
Q psy8152 241 TNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLIL-SVSLDRHFRVHDFHS 306 (444)
Q Consensus 241 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~-s~~~dg~i~vw~~~~ 306 (444)
+++|+++++...++.|.+|+..+ ++.+..+..+...+.+++|+|++++|+ +...++.|..|++..
T Consensus 234 d~~G~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 234 DEDNNLLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp BTTCCEEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCEEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999888877788999999987 777777776667899999999999555 444567899998864
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.63 E-value=1.1e-12 Score=120.25 Aligned_cols=273 Identities=10% Similarity=-0.029 Sum_probs=183.5
Q ss_pred cCCcEEEEEEc--CC---eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEEEEEcCCC
Q psy8152 53 VEESELLIAYS--GQ---KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVKLWRYKTE 117 (444)
Q Consensus 53 ~~~~~l~~~~~--d~---~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~iw~~~~~ 117 (444)
+++.+++++.. .. .|.+||..+++.+..+.. ...+-..++|++++++++. .++.|.+||..+.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~--g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--GFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC--CCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 67777777653 22 889999999998776653 2344778899999988886 3678999999887
Q ss_pred Ccccccccc-------CCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccCc
Q psy8152 118 PDQWTNFNV-------GPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRRP 187 (444)
Q Consensus 118 ~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 187 (444)
+.+..+.-. ......++|+|++++|+++.. ++.|.++| .+++.+.. +... .
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~----------------- 168 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T----------------- 168 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c-----------------
Confidence 766422111 123558999999999998874 57899999 98887766 4321 1
Q ss_pred cceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceE--EEeCCCCCe-eEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 188 VWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVL--KVDIPDVAL-SCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 188 ~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
++.+.|.+ +.+++.+.||.+.+++.. ........ .+.....++ ....+.+++..++..+..+.+.+.|+..
T Consensus 169 ----~~~~~~~~~~~~~~~~~dg~~~~vd~~-g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~ 243 (373)
T 2mad_H 169 ----CYHIHPGAPSTFYLLCAQGGLAKTDHA-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA 243 (373)
T ss_pred ----eEEEEeCCCceEEEEcCCCCEEEEECC-CcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccC
Confidence 24455665 556667788999999873 21110110 000111221 2345666655555555788999999875
Q ss_pred CCc--ceeEecc----------ccCceeEEEecCCCCEEEEEEC----------CCcEEEEEcCCCceEEEeecCCceeE
Q psy8152 264 KGK--PCYKYKG----------FAGCVKDIACPLNENLILSVSL----------DRHFRVHDFHSKKLLRKDYMQSRLTS 321 (444)
Q Consensus 264 ~~~--~~~~~~~----------h~~~i~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~~~~~~~~~~~~~i~~ 321 (444)
.. .+..+.- .......++++|+++.|+++.. .+.|.++|+.+++.+.++.......+
T Consensus 244 -~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~ 322 (373)
T 2mad_H 244 -AGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDA 322 (373)
T ss_pred -CcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCe
Confidence 32 2223221 1122344789999987777653 35799999999999999987778899
Q ss_pred EEEcCCCcccccchhhh-hccccc-cCCCccccCCCcccccc
Q psy8152 322 ILVRSDFSLENETKKEE-QEHSEE-KGDSDEKYDPEHFEMNQ 361 (444)
Q Consensus 322 ~~~~~~~~~~~~~~~~~-~~~s~~-~d~~i~~W~~~~~~~~~ 361 (444)
++|+++ ++ ++.++. .++.|.++|..+.+...
T Consensus 323 i~~s~D---------g~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 323 ISVAQD---------GGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred EEECCC---------CCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 998855 45 555555 58999999998776553
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.63 E-value=3.5e-13 Score=125.25 Aligned_cols=240 Identities=9% Similarity=0.029 Sum_probs=164.9
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC--cEEEEEcCCCCcc
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG--DVKLWRYKTEPDQ 120 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~ 120 (444)
.....|+|+ +++.++++...++.|++|+..++........ ..... .++++++++|+++..++ .|.+|+...+...
T Consensus 131 ~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 467899999 7888777777779999999987776655432 22333 77889999998888766 7888887765543
Q ss_pred ccc----cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152 121 WTN----FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL 196 (444)
Q Consensus 121 ~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 196 (444)
..+ ......+.+++++|+...|+.+..++.|+.|+..++.... +..... .+. ....+...++|+
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~-~~~~~~-------~g~----~~~~P~~~ia~~ 275 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTL-IKQLEL-------SGS----LGTNPGPYLIYY 275 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEE-EEECCC-------CSC----CCCSSCCEEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEE-Eecccc-------cCC----CCCCccccEEEe
Confidence 222 2145667899999954455557778899999998765322 111000 000 000011389999
Q ss_pred cC-CCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC---------------CCeeEEEEccCCCEEEEEc-CCCcEEEE
Q psy8152 197 PN-SDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD---------------VALSCITTTNQSHYVIVGS-TTGDMMAV 259 (444)
Q Consensus 197 ~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~l~~~~-~dg~i~iw 259 (444)
|+ +.++++-...+.|+.|+.. .. +..+.++. .....++++|+|+++++-+ .++.|+.|
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~---g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~ 350 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPD---GE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKL 350 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTT---CC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEecC---CC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEE
Confidence 95 5666666778899999987 22 22232221 3468899999999888887 88999999
Q ss_pred EcCCCCcceeEeccc---------------cCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 260 DLRGKGKPCYKYKGF---------------AGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 260 d~~~~~~~~~~~~~h---------------~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
++.. +. +.++.++ -.....+++++++.++++-..+++|+.+.+
T Consensus 351 ~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 351 DILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred ECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 9876 65 4444443 245789999999888888888888888765
No 207
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.59 E-value=1.2e-12 Score=129.37 Aligned_cols=293 Identities=11% Similarity=0.108 Sum_probs=194.4
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcc-------cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNK-------ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFN 78 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~ 78 (444)
+..|++++.++.|+.+|..+++..-. + ........ .....+++. +..|++++.++.|+.+|..+|+.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~-~-~~~~~~~~~~~~~~~~~~~~~a~~---~~~v~v~~~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWT-Y-DPQIDRSTGFKGCCDVVNRGVALW---KGKVYVGAWDGRLIALDAATGKEV 151 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEE-E-CCCCCGGGGGGSSSCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEE-E-cCCCCccccccccccCCCCCceEE---CCEEEEEcCCCEEEEEECCCCCEE
Confidence 46788888899999999998875211 1 11100000 001223333 678889999999999999999998
Q ss_pred cceeec-ccc--ccEEE-EEeCCCeEEEEec------CCcEEEEEcCCCCccccccccCC--------------------
Q psy8152 79 TNTDVS-FGE--GDIVG-VSRYDECILTAVK------SGDVKLWRYKTEPDQWTNFNVGP-------------------- 128 (444)
Q Consensus 79 ~~~~~~-~~~--~~v~~-~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~-------------------- 128 (444)
..+... ... ..+.+ ....+..+++++. ++.|+.||..+++.++.+.....
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred eeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 877643 100 11111 0113455555543 78999999999998864432211
Q ss_pred ------------CeEEEEEeccCCEEEEeeCCC-------------------eEEEEEcCCceeeeeeecccceeeEeee
Q psy8152 129 ------------QLECMKHNKHSNIIATGGKEN-------------------DLKLWDLNTTKNIFSAKNVSHRVLVYSV 177 (444)
Q Consensus 129 ------------~v~~~~~~~~~~~l~~~~~d~-------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 177 (444)
....+++.|++.+++.++.++ .|..+|..+++.+..++...+
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~------- 304 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPG------- 304 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT-------
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCC-------
Confidence 113578888888888877664 599999999999888765332
Q ss_pred CCCcccccCccceeEEEEecCC---CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-----------CCe--------
Q psy8152 178 KPDEFDLRRPVWVNGISFLPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-----------VAL-------- 235 (444)
Q Consensus 178 ~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----------~~i-------- 235 (444)
+..+........-+....+| ..|++++.+|.|+++|.. +++.+..+.... .++
T Consensus 305 --d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~---tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~ 379 (677)
T 1kb0_A 305 --DNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRT---NGKFISAKNFVPVNWASGYDKHGKPIGIAAARDG 379 (677)
T ss_dssp --CCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEESSCCSSEEEECTTSCEEECGGGGCT
T ss_pred --cccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECC---CCCEeccccccccCcccccCCCCceeeccccCcC
Confidence 11111111122223344577 688999999999999998 666665544221 001
Q ss_pred ----------------eEEEEccCCCEEEEEcC-------------------------------------------CCcE
Q psy8152 236 ----------------SCITTTNQSHYVIVGST-------------------------------------------TGDM 256 (444)
Q Consensus 236 ----------------~~~~~~~~~~~l~~~~~-------------------------------------------dg~i 256 (444)
..++|+|+..++++... .|.|
T Consensus 380 ~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l 459 (677)
T 1kb0_A 380 SKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRL 459 (677)
T ss_dssp TSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEE
T ss_pred CCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEE
Confidence 25788998888877533 2789
Q ss_pred EEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC
Q psy8152 257 MAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS 317 (444)
Q Consensus 257 ~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~ 317 (444)
..||+.+ ++.+.+++ +..++....+...+.+++.++.+|.+++||..+++++.++....
T Consensus 460 ~A~D~~t-G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 460 LAWDPVA-QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEETTT-TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EEEeCCC-CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 9999999 99988886 33445555666778888999999999999999999999887444
No 208
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.59 E-value=3.8e-13 Score=121.87 Aligned_cols=282 Identities=10% Similarity=-0.038 Sum_probs=185.6
Q ss_pred cccEEEecC-CC----cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE----------cCCeEEEE
Q psy8152 6 DYNIYIGSS-TG----AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY----------SGQKIKIY 70 (444)
Q Consensus 6 ~~~l~~g~~-dg----~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~----------~d~~i~vw 70 (444)
...+++... ++ .|.++|..+.+. . ..+.. +. .+ .+.++ |++++++++. .++.|.+|
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v-~---~~i~v-G~-~P--~i~~s-pDg~~lyVan~~~~r~~~G~~~~~Vsvi 101 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVT-L---GHSLG-AF-LS--LAVAG-HSGSDFALASTSFARSAKGKRTDYVEVF 101 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEE-E---EEEEE-CT-TC--EEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEE
T ss_pred CCeEEEECCccCCccceEEEEECCCCeE-E---EEEeC-CC-CC--ceEEC-CCCCEEEEEcccccccccCCCCCEEEEE
Confidence 344555543 34 788999988875 2 22222 22 23 79999 7999999886 36899999
Q ss_pred eCCCCccccceeec-------cccccEEEEEeCCCeEEEEec--CCcEEE--EEcCCCCccccccccCCCeEEEEEeccC
Q psy8152 71 DTDFKNFNTNTDVS-------FGEGDIVGVSRYDECILTAVK--SGDVKL--WRYKTEPDQWTNFNVGPQLECMKHNKHS 139 (444)
Q Consensus 71 ~~~~~~~~~~~~~~-------~~~~~v~~~s~~~~~l~~~~~--dg~i~i--w~~~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (444)
|+.+++.+..+... +....-..++|+|++++++.. ...|.+ +|+.+ +..+ .-.. |+.+.|++
T Consensus 102 D~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i-~v~~---~~~~~p~g 174 (368)
T 1mda_H 102 DPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLT-KSAS---CFHIHPGA 174 (368)
T ss_dssp CTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEE-ECSS---CCCCEEEE
T ss_pred ECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEE-ECCC---ceEEccCC
Confidence 99999999988754 134556889999999998875 457888 88876 2212 1111 12234533
Q ss_pred -CEEEEeeCCCeEEEEEcCC-----ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEE
Q psy8152 140 -NIIATGGKENDLKLWDLNT-----TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRV 213 (444)
Q Consensus 140 -~~l~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 213 (444)
..+++.+.||.+.+.++.+ ++.+.... . ..... ..+. . .+++..++..+. +.|.+
T Consensus 175 ~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t---~-~i~vg----------~~P~---~-~~~~~~~~~vs~-~~V~v 235 (368)
T 1mda_H 175 AATHYLGSCPASLAASDLAAAPAAAGIVGAQCT---G-AQNCS----------SQAA---Q-ANYPGMLVWAVA-SSILQ 235 (368)
T ss_dssp TTEEECCCCTTSCEEEECCSSCCCCEECCCCSC---T-TSCBC----------SCCE---E-ETTTTEEEECBS-SCCEE
T ss_pred CeEEEEEcCCCCEEEEECccccccCCeEEEEee---e-eeeCC----------CCcc---c-cccCCEEEEEcC-CEEEE
Confidence 4555667788888889876 43322110 0 00000 0122 3 666666666666 99999
Q ss_pred EEcCCCCCccceEEEeCC----------CCCeeEEEEccCCCEEEEEcC---------CCcEEEEEcCCCCcceeEeccc
Q psy8152 214 YDPKITTQRRPVLKVDIP----------DVALSCITTTNQSHYVIVGST---------TGDMMAVDLRGKGKPCYKYKGF 274 (444)
Q Consensus 214 ~d~~~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~h 274 (444)
.|+. ......+..+... ......++|+|+++.++++.. .+.+.++|+.+ .+.+.++...
T Consensus 236 iD~~-~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg 313 (368)
T 1mda_H 236 GDIP-AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNG 313 (368)
T ss_dssp EECC-SSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEE
T ss_pred EECC-CCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECC
Confidence 9986 1111222222110 011223789999988887533 23566999999 9999888743
Q ss_pred cCceeEEEecCCCC-EEEEEE-CCCcEEEEEcCCCceEEEeecCCceeEEEEc
Q psy8152 275 AGCVKDIACPLNEN-LILSVS-LDRHFRVHDFHSKKLLRKDYMQSRLTSILVR 325 (444)
Q Consensus 275 ~~~i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~ 325 (444)
. ...+++|+|+++ ++++.. .++.|.++|+.+++.+.++........+++.
T Consensus 314 ~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 314 H-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp E-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred C-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEee
Confidence 3 578999999997 566666 5999999999999999998877777777664
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.58 E-value=2.4e-13 Score=136.79 Aligned_cols=274 Identities=12% Similarity=0.018 Sum_probs=170.7
Q ss_pred cCCcEEEEEEcCCe---EEEEeCC-----CCccccceee----cccccc--EEEEEeCCCeEEEEecC-----CcEEEEE
Q psy8152 53 VEESELLIAYSGQK---IKIYDTD-----FKNFNTNTDV----SFGEGD--IVGVSRYDECILTAVKS-----GDVKLWR 113 (444)
Q Consensus 53 ~~~~~l~~~~~d~~---i~vw~~~-----~~~~~~~~~~----~~~~~~--v~~~s~~~~~l~~~~~d-----g~i~iw~ 113 (444)
|++++++....++. -.+|... .+.....+.. .++... -.++||+|++|+.+..+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 67888887665432 5555543 3333222111 122222 34668999998877654 4699999
Q ss_pred cCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCe--------------EEEEEcCCcee--eeeeecccceeeEeee
Q psy8152 114 YKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEND--------------LKLWDLNTTKN--IFSAKNVSHRVLVYSV 177 (444)
Q Consensus 114 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~vwd~~~~~~--~~~~~~~~~~~~~~~~ 177 (444)
+.+++.+. ...+...+..++|+|+ +.|+.++.++. |++|++.++.. ...+.....
T Consensus 196 l~tg~~~~-~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~------- 266 (741)
T 1yr2_A 196 VADGKPLA-DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL------- 266 (741)
T ss_dssp TTTCCEEE-EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC-------
T ss_pred CCCCCCCC-ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC-------
Confidence 99998764 2222222367899999 98988876554 88999877542 111111111
Q ss_pred CCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEcCCCCCc--cceEEEeCCCCCeeEEEEccCCCEEEEE
Q psy8152 178 KPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDPKITTQR--RPVLKVDIPDVALSCITTTNQSHYVIVG 250 (444)
Q Consensus 178 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 250 (444)
+..+..+.|+|+|++|+..+.+ ..|++||+. .. .+...+..+...+... ++|+|+.|+..
T Consensus 267 ---------~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~---~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~ 333 (741)
T 1yr2_A 267 ---------PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT---NGKIGPVTALIPDLKAQWDF-VDGVGDQLWFV 333 (741)
T ss_dssp ---------TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE---TTEECCCEEEECSSSSCEEE-EEEETTEEEEE
T ss_pred ---------CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC---CCCCcccEEecCCCCceEEE-EeccCCEEEEE
Confidence 1247889999999988877654 389999998 33 2144555555555555 34888888876
Q ss_pred cCC----CcEEEEEcCCCC--cceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcC-CCceEEEeec--CCceeE
Q psy8152 251 STT----GDMMAVDLRGKG--KPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH-SKKLLRKDYM--QSRLTS 321 (444)
Q Consensus 251 ~~d----g~i~iwd~~~~~--~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~-~~~~~~~~~~--~~~i~~ 321 (444)
+.. +.|.+|++.+ + .....+..+...+..++|+ ++.++++...++..+||.+. +++.+..+.. ...+..
T Consensus 334 s~~~~~~~~l~~~d~~~-~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~ 411 (741)
T 1yr2_A 334 SGDGAPLKKIVRVDLSG-STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASG 411 (741)
T ss_dssp ECTTCTTCEEEEEECSS-SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEE
T ss_pred ECCCCCCCEEEEEeCCC-CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEE
Confidence 653 4599999887 4 2233344455567778887 56788888889987777654 3555555542 345666
Q ss_pred EEEcCCCcccccchhhhhcc----ccccCCCccccCCCcccc
Q psy8152 322 ILVRSDFSLENETKKEEQEH----SEEKGDSDEKYDPEHFEM 359 (444)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~----s~~~d~~i~~W~~~~~~~ 359 (444)
+.++++ +..++ +....+++.+|++.+++.
T Consensus 412 ~~~s~d---------~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 412 LSGRPG---------DRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EECCBT---------CSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred eecCCC---------CCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 665543 33333 444567899999876653
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.57 E-value=3.8e-13 Score=123.85 Aligned_cols=275 Identities=13% Similarity=0.013 Sum_probs=188.6
Q ss_pred eeccCCcEEEEEEcC-----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEEEEEc
Q psy8152 50 WGNVEESELLIAYSG-----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVKLWRY 114 (444)
Q Consensus 50 ~~~~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~iw~~ 114 (444)
.-|+++.+++++... +.|.++|..+++.+..+.... .. -..++|++++|+++. .++.|.++|.
T Consensus 79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 334567777766553 699999999999999887533 33 677899999888876 3678999999
Q ss_pred CCCCcccccc-c------cCCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc
Q psy8152 115 KTEPDQWTNF-N------VGPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR 185 (444)
Q Consensus 115 ~~~~~~~~~~-~------~~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (444)
.+++.+..+. + .......++|+|++++|+++.. ++.|.+.|+.+++.+.++.....
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--------------- 221 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--------------- 221 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---------------
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---------------
Confidence 9988775332 1 1234568999999999999874 58899999999998877653211
Q ss_pred CccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEE----EeCCCCCe-eEEEEccCCCEEEEEcCCCcEEEE
Q psy8152 186 RPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLK----VDIPDVAL-SCITTTNQSHYVIVGSTTGDMMAV 259 (444)
Q Consensus 186 ~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~iw 259 (444)
....|.+ ..+++.+.||++.+.++. ..+.... +.....++ ..+.|.+++..++..+..+.+.+.
T Consensus 222 -------~~~~p~g~~~~v~~~~dG~~~~V~~~---~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~Vi 291 (426)
T 3c75_H 222 -------YHIFPASPTVFYMNCRDGSLARVDFA---DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQA 291 (426)
T ss_dssp -------EEEEEEETTEEEEEETTSSEEEEECC---TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEE
T ss_pred -------eeeccCCCcEEEEEcCCCCEEEEECC---CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEE
Confidence 2233333 455556667777666664 2222211 11111221 245688988887777788999999
Q ss_pred EcCCCCcc--eeEecc----------ccCceeEEEecCCCCEEEEEEC----------CCcEEEEEcCCCceEEEeecCC
Q psy8152 260 DLRGKGKP--CYKYKG----------FAGCVKDIACPLNENLILSVSL----------DRHFRVHDFHSKKLLRKDYMQS 317 (444)
Q Consensus 260 d~~~~~~~--~~~~~~----------h~~~i~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~~~~~~~~~~~~ 317 (444)
|+.. ... +..+.- .......++++|+++++++... .+.|.++|+.+++.+.++....
T Consensus 292 D~~~-~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~ 370 (426)
T 3c75_H 292 DLTA-EGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH 370 (426)
T ss_dssp EECS-SCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred eccC-CceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC
Confidence 9865 321 111110 0112233689999887776542 3579999999999999998777
Q ss_pred ceeEEEEcCCCcccccchhhh-hccccc-cCCCccccCCCcccccc
Q psy8152 318 RLTSILVRSDFSLENETKKEE-QEHSEE-KGDSDEKYDPEHFEMNQ 361 (444)
Q Consensus 318 ~i~~~~~~~~~~~~~~~~~~~-~~~s~~-~d~~i~~W~~~~~~~~~ 361 (444)
...+++|+++ ++ ++.+.. .++.|.++|..+.+...
T Consensus 371 ~P~gia~spD---------g~~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 371 EIDSINVSQD---------AEPLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp EECEEEECCS---------SSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CcCeEEEccC---------CCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence 7889998855 44 555555 58999999998777553
No 211
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.57 E-value=8.5e-12 Score=114.98 Aligned_cols=309 Identities=11% Similarity=0.082 Sum_probs=192.7
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeeccc---Cc--ccceE-EEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI---TN--KASVL-ALNWGNVEESELLIAYSGQKIKIYDTDFKNFN 78 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~---~h--~~~v~-~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~ 78 (444)
.+..|++++.++.|+.+|..+++..- . ..+... .+ ...+. .+.. .+..+++++.++.|..+|..+++.+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W-~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIW-S-VSLAEKDGWFSKEPALLSGGVTV---SGGHVYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEE-E-EECCC---CCSCCCCCEEEEEEE---ETTEEEEEETTSEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceee-e-ecCccccccccccCcccccCceE---eCCEEEEEcCCCEEEEEECCCCCEE
Confidence 35678889999999999998887421 1 111100 00 12232 2333 3678888999999999999999988
Q ss_pred cceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCe------EEEEEeccCCEEEEeeCCCeEE
Q psy8152 79 TNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQL------ECMKHNKHSNIIATGGKENDLK 152 (444)
Q Consensus 79 ~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~~~~~d~~i~ 152 (444)
..+.......... ...+..+++++.++.|..+|..+++.++..... .++ ..... .+..++.++.++.|.
T Consensus 127 W~~~~~~~~~~~p--~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~-~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~ 201 (376)
T 3q7m_A 127 WQTKVAGEALSRP--VVSDGLVLIHTSNGQLQALNEADGAVKWTVNLD-MPSLSLRGESAPTT--AFGAAVVGGDNGRVS 201 (376)
T ss_dssp EEEECSSCCCSCC--EEETTEEEEECTTSEEEEEETTTCCEEEEEECC-C-----CCCCCCEE--ETTEEEECCTTTEEE
T ss_pred EEEeCCCceEcCC--EEECCEEEEEcCCCeEEEEECCCCcEEEEEeCC-CCceeecCCCCcEE--ECCEEEEEcCCCEEE
Confidence 7665432211111 123567888889999999999999888643332 222 12222 245788888899999
Q ss_pred EEEcCCceeeeeeecccceeeEeeeCCCcccccCccce-eEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC
Q psy8152 153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV-NGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP 231 (444)
Q Consensus 153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 231 (444)
.+|..+++.+............ . ...+. .+ ..... .+..+++++.++.|..+|.. .++.+......
T Consensus 202 ~~d~~tG~~~w~~~~~~~~~~~-~--~~~~~-----~~~~~p~~--~~~~v~~~~~~g~l~~~d~~---tG~~~w~~~~~ 268 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRISQATGST-E--IDRLS-----DVDTTPVV--VNGVVFALAYNGNLTALDLR---SGQIMWKRELG 268 (376)
T ss_dssp EEETTTCCEEEEEECCC-------------------CCCCCCEE--ETTEEEEECTTSCEEEEETT---TCCEEEEECCC
T ss_pred EEECCCCcEEEEEecccCCCCc-c--ccccc-----ccCCCcEE--ECCEEEEEecCcEEEEEECC---CCcEEeeccCC
Confidence 9999999988776533210000 0 00000 00 01111 24677778889999999998 66666655432
Q ss_pred CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152 232 DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL 310 (444)
Q Consensus 232 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 310 (444)
....+.. .+..|++++.++.|..+|..+ ++.+..... ....+..... .+..|+.++.+|.|+++|..+++.+
T Consensus 269 --~~~~~~~--~~~~l~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 269 --SVNDFIV--DGNRIYLVDQNDRVMALTIDG-GVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp --CEEEEEE--ETTEEEEEETTCCEEEEETTT-CCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred --CCCCceE--ECCEEEEEcCCCeEEEEECCC-CcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 2344444 356788888899999999999 988877662 2222333333 2567888899999999999999988
Q ss_pred EEeec-CCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 311 RKDYM-QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 311 ~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
.+... ...+.+... ..+..+..++.+|.+..|+
T Consensus 342 ~~~~~~~~~~~~~~~----------~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 342 AQQKVDSSGFQTEPV----------AADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEECCTTCBCSCCE----------EETTEEEEEBTTSCEEEEE
T ss_pred EEEecCCCcceeCCE----------EECCEEEEEeCCCEEEEEe
Confidence 77654 333221110 1123455566778877764
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=1.3e-12 Score=116.17 Aligned_cols=229 Identities=14% Similarity=0.075 Sum_probs=150.1
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW 121 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 121 (444)
..-.-+..|+|.++.++++....+.|+.|+..+++.. .+.. .......+++++++++++ . ++.|.+|+..+++...
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTM-DAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEC-SSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeC-CCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEE
Confidence 3455688899434556666667899999999877652 3322 112223445678885554 3 5689999998776542
Q ss_pred cccc-----cCCCeEEEEEeccCCEEEEeeCC---------CeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccC
Q psy8152 122 TNFN-----VGPQLECMKHNKHSNIIATGGKE---------NDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRR 186 (444)
Q Consensus 122 ~~~~-----~~~~v~~~~~~~~~~~l~~~~~d---------~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (444)
+.. ....++.+++.|+|+++++.... ..-.+|.+.. ++........ .
T Consensus 88 -~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~-~---------------- 149 (297)
T 3g4e_A 88 -LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV-D---------------- 149 (297)
T ss_dssp -EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE-S----------------
T ss_pred -EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc-c----------------
Confidence 221 12347889999999877654321 2234554443 3322222111 1
Q ss_pred ccceeEEEEecCCCEE-EEEeCCceEEEEEcC-CCCCc---cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEc
Q psy8152 187 PVWVNGISFLPNSDKV-AVCSKQGYVRVYDPK-ITTQR---RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDL 261 (444)
Q Consensus 187 ~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~-~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 261 (444)
..+.++|+|+++.| ++.+..+.|.+|++. ..+.. +.+..+..+......+++.++|++.++....+.|.+||.
T Consensus 150 --~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 150 --ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp --BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred --cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 36889999999866 455667899999974 11111 112222223356789999999988888777888999999
Q ss_pred CCCCcceeEeccccCceeEEEec-CCCCEEEEEEC
Q psy8152 262 RGKGKPCYKYKGFAGCVKDIACP-LNENLILSVSL 295 (444)
Q Consensus 262 ~~~~~~~~~~~~h~~~i~~~~~s-~~~~~l~s~~~ 295 (444)
.+ ++.+..+..+...+++++|. |+++.|+.++.
T Consensus 228 ~t-G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 228 VT-GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TT-CCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CC-ceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 98 89999888777789999998 88876665553
No 213
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.55 E-value=4.6e-12 Score=125.50 Aligned_cols=292 Identities=11% Similarity=0.114 Sum_probs=188.8
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccC----c-c-cce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYIT----N-K-ASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFN 78 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~----h-~-~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~ 78 (444)
+..|++++.++.|+.+|..+++..-+ +. ..... + . ..+ ..+++. +..|++++.|+.|+.+|..+|+.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~-~~-~~~~~~~~~~~~~~~~~~~~~~~---~g~v~v~~~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWK-YD-PQSDRHRAGEACCDAVNRGVAVW---KGKVYVGVLDGRLEAIDAKTGQRA 144 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEE-EC-CCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEE-Ec-CCCCccccccccccCCCCccEEE---CCEEEEEccCCEEEEEECCCCCEe
Confidence 56788888899999999998885211 11 11000 0 0 001 122333 678889999999999999999998
Q ss_pred cceeeccccccEEEE--Ee--CCCeEEEEe------cCCcEEEEEcCCCCcccccccc----------------------
Q psy8152 79 TNTDVSFGEGDIVGV--SR--YDECILTAV------KSGDVKLWRYKTEPDQWTNFNV---------------------- 126 (444)
Q Consensus 79 ~~~~~~~~~~~v~~~--s~--~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~---------------------- 126 (444)
..+....+......+ +| .+..+++++ .++.|+.||..+++.++.+...
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred eeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 777542011100000 11 234444443 3689999999999987744310
Q ss_pred ---------CCCeEEEEEeccCCEEEEeeCCCe-------------------EEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152 127 ---------GPQLECMKHNKHSNIIATGGKEND-------------------LKLWDLNTTKNIFSAKNVSHRVLVYSVK 178 (444)
Q Consensus 127 ---------~~~v~~~~~~~~~~~l~~~~~d~~-------------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (444)
......+++.|+..+++.++.++. |..||..+++.+..++...+.
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d------- 297 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGD------- 297 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTC-------
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcc-------
Confidence 011125788888888998887764 999999999999887653320
Q ss_pred CCcccccCccceeEEEEecCCC---EEEEEeCCceEEEEEcCCCCCccceEEEeCCC-----------------------
Q psy8152 179 PDEFDLRRPVWVNGISFLPNSD---KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD----------------------- 232 (444)
Q Consensus 179 ~~~~~~~~~~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~----------------------- 232 (444)
..+......+.......+|+ .++.++.+|.++++|.. +++.+.......
T Consensus 298 --~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~ 372 (689)
T 1yiq_A 298 --AWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRA---TGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAY 372 (689)
T ss_dssp --CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCT
T ss_pred --cccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECC---CCCEeccccccccccccccCccCCCcccchhhccc
Confidence 00000011122222333554 78899999999999998 555543222110
Q ss_pred ----------------CCeeEEEEccCCCEEEEEcC--------------------------------------------
Q psy8152 233 ----------------VALSCITTTNQSHYVIVGST-------------------------------------------- 252 (444)
Q Consensus 233 ----------------~~i~~~~~~~~~~~l~~~~~-------------------------------------------- 252 (444)
..-..++|+|+..+|++...
T Consensus 373 ~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~ 452 (689)
T 1yiq_A 373 WKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKS 452 (689)
T ss_dssp TTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTT
T ss_pred cCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCC
Confidence 01123788998777776522
Q ss_pred -CCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC
Q psy8152 253 -TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ 316 (444)
Q Consensus 253 -dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~ 316 (444)
+|.|+.||+.+ ++.+.+++.+. ++....+...+.+++.++.||.|++||..+|+++.++...
T Consensus 453 ~~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 453 WSGKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CEEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceeEEEEECCC-CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 37799999999 99998887543 3344456667889999999999999999999999887744
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.55 E-value=2e-13 Score=123.94 Aligned_cols=173 Identities=9% Similarity=0.068 Sum_probs=130.6
Q ss_pred cccEEEEEeCCCeEEEEecCCcEEEEEcCCCC---------ccc-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc
Q psy8152 87 EGDIVGVSRYDECILTAVKSGDVKLWRYKTEP---------DQW-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL 156 (444)
Q Consensus 87 ~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~ 156 (444)
.....++++...++++|+.+ .+++|++...+ ... ....+.. |+.++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 45667888999999999887 56669865433 111 2345667 999999 89999999 8899999999
Q ss_pred CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCee
Q psy8152 157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALS 236 (444)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~ 236 (444)
.+.........+.. .+.++.+.+. .+++++.||.|.+||+. ...... +...|+
T Consensus 114 ~sl~~~~~~~~~~~------------------~v~~i~~~~p--~~av~~~dG~L~v~dl~---~~~~~~----~~~~Vs 166 (388)
T 1xip_A 114 EELSEFRTVTSFEK------------------PVFQLKNVNN--TLVILNSVNDLSALDLR---TKSTKQ----LAQNVT 166 (388)
T ss_dssp SSTTCEEEEEECSS------------------CEEEEEECSS--EEEEEETTSEEEEEETT---TCCEEE----EEESEE
T ss_pred hhhhccCccceeec------------------ceeeEEecCC--CEEEEECCCCEEEEEcc---CCcccc----ccCCce
Confidence 88554444444444 4677776653 38889999999999998 333332 234799
Q ss_pred EEEEccCCCEEEEEcCCCcEEEEEcCCCCcc--eeEe------c---cccCceeEEEecCCCCEEEEEE
Q psy8152 237 CITTTNQSHYVIVGSTTGDMMAVDLRGKGKP--CYKY------K---GFAGCVKDIACPLNENLILSVS 294 (444)
Q Consensus 237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~------~---~h~~~i~~~~~s~~~~~l~s~~ 294 (444)
+++|||+| ++.|..||++++|+... ... ..++ . +|...|.+|.|.+++.++++-+
T Consensus 167 ~v~WSpkG--~~vg~~dg~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 167 SFDVTNSQ--LAVLLKDRSFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEECSSE--EEEEETTSCEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEEcCCc--eEEEEcCCcEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99999999 67788999999998886 554 5556 2 3678899999999999888754
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.54 E-value=4.8e-12 Score=113.42 Aligned_cols=226 Identities=11% Similarity=0.080 Sum_probs=147.0
Q ss_pred ecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccc-eeec-c---c
Q psy8152 12 GSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTN-TDVS-F---G 86 (444)
Q Consensus 12 g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~-~~~~-~---~ 86 (444)
+..++.|.+|+..+++. ..+..-...++...+.+++++ +++..|+.++..+.|.+|+.. ++.... .... . .
T Consensus 42 ~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~i~~~-~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 117 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKK--TVICKPEVNGYGGIPAGCQCD-RDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQ 117 (314)
T ss_dssp TEECCEEEEECTTTCCE--EEEECCEETTEECCEEEEEEC-SSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCB
T ss_pred CCCCCEEEEEeCCCCcE--EEEEecccCCCCCCCceEEEe-cCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCcccc
Confidence 46788999999877763 222110001355678999999 672344444445589999988 665433 2211 1 1
Q ss_pred cccEEEEEeCCCeEEEEecC---------------CcEEEEEcCCCCccccccccCCCeEEEEEe----ccCCEEEEe-e
Q psy8152 87 EGDIVGVSRYDECILTAVKS---------------GDVKLWRYKTEPDQWTNFNVGPQLECMKHN----KHSNIIATG-G 146 (444)
Q Consensus 87 ~~~v~~~s~~~~~l~~~~~d---------------g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~ 146 (444)
...-..+.++++++++...+ +.|..|+.. ++.. .+..+......++|+ |+++.|+.+ .
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEET
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-EeccCCCCcceEEEecccCCCCCEEEEEEC
Confidence 12234556788877766554 466666655 4433 233444567889999 988655544 5
Q ss_pred CCCeEEEEEcC-Ccee-----eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC
Q psy8152 147 KENDLKLWDLN-TTKN-----IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT 220 (444)
Q Consensus 147 ~d~~i~vwd~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 220 (444)
.++.|.+|++. .++. ...+..+. ...+..++++++|+++++...++.|.+|+..
T Consensus 196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-----------------~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~--- 255 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTH-----------------EGGADGMDFDEDNNLLVANWGSSHIEVFGPD--- 255 (314)
T ss_dssp TTTEEEEEEEEETTEEEEEEEEEECCCCS-----------------SCEEEEEEEBTTCCEEEEEETTTEEEEECTT---
T ss_pred CCCeEEEEECCCCCccccceEEEECCCCC-----------------CCCCCceEECCCCCEEEEEcCCCEEEEEcCC---
Confidence 67899999986 3432 11111111 0147889999999988888788999999987
Q ss_pred CccceEEEeCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCC
Q psy8152 221 QRRPVLKVDIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRG 263 (444)
Q Consensus 221 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~ 263 (444)
....+..+..+...+.+++|+|++++|+ +...++.|..|++..
T Consensus 256 ~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 4555566666667789999999999554 555668899999876
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=4.6e-13 Score=121.55 Aligned_cols=173 Identities=13% Similarity=0.101 Sum_probs=131.3
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc---------cccceeeccccccEEEEEeCCCeEEEEecCCcEEEEE
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN---------FNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWR 113 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~---------~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~ 113 (444)
.++..++++ +...+|++|+.+ .+++|+++..+ ....... .+.. |..++.++++|+++ .++.|++|+
T Consensus 38 ~~~nlLais-~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~fd~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDIS-NSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCFHGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEE-TTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEEETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEc-CCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEECCCEEEEE-cCCcEEEEE
Confidence 368999999 789999999986 56679876443 1111111 3344 77776688899988 889999999
Q ss_pred cCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152 114 YKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI 193 (444)
Q Consensus 114 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (444)
+.+.........|..++.++.+.+. .+++++.||.|.+|++..+.... +.. .|+|+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~------------------~Vs~v 168 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQ------------------NVTSF 168 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEE------------------SEEEE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccC------------------CceEE
Confidence 9877655455667778888877654 38889999999999999876543 122 59999
Q ss_pred EEecCCCEEEEEeCCceEEEEEcCCCCCccc--eEEE------e---CCCCCeeEEEEccCCCEEEE
Q psy8152 194 SFLPNSDKVAVCSKQGYVRVYDPKITTQRRP--VLKV------D---IPDVALSCITTTNQSHYVIV 249 (444)
Q Consensus 194 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~l~~ 249 (444)
+|+|+| ++.|..||++++|+.. .... ..++ . +|...|.+|.|.+++.++++
T Consensus 169 ~WSpkG--~~vg~~dg~i~~~~~~---~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 169 DVTNSQ--LAVLLKDRSFQSFAWR---NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EECSSE--EEEEETTSCEEEEEEE---TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCc--eEEEEcCCcEEEEcCC---CccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 999998 7789999999999887 3332 4445 2 36788999999999988886
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=1.7e-11 Score=108.97 Aligned_cols=213 Identities=12% Similarity=0.028 Sum_probs=144.1
Q ss_pred EEEEeC-CCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152 91 VGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS 169 (444)
Q Consensus 91 ~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 169 (444)
..++++ +.++++....+.|+.|+..+++.. .......+.+++++++++++++ . ++.|.+||..+++.........
T Consensus 18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--RVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEE--EEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCT
T ss_pred CeEECCCCEEEEEECCCCEEEEEECCCCcEE--EEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCC
Confidence 344564 445666667899999999877653 3445678999999999985554 3 5689999998766432222111
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC---------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEE
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK---------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITT 240 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~ 240 (444)
. .....++.++++|+|+++++... .....+|.+.. ... +..+.........++|
T Consensus 94 ~--------------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~--~g~-~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 94 D--------------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP--DHH-VKKYFDQVDISNGLDW 156 (297)
T ss_dssp T--------------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT--TSC-EEEEEEEESBEEEEEE
T ss_pred C--------------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC--CCC-EEEEeeccccccceEE
Confidence 0 00124789999999987765422 12345555541 122 2222223334678999
Q ss_pred ccCCCEEE-EEcCCCcEEEEEcC--CCCcc-----eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152 241 TNQSHYVI-VGSTTGDMMAVDLR--GKGKP-----CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK 312 (444)
Q Consensus 241 ~~~~~~l~-~~~~dg~i~iwd~~--~~~~~-----~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 312 (444)
+|+++.|+ +.+..+.|.+|++. + +.. +..+..+...+..+++.++|++.++....+.|.+|+..+++++..
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~-G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQT-GQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTT-CCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCC-CcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 99998765 55667889999973 4 432 223333446678999999998888877888999999999999888
Q ss_pred eecC-CceeEEEEc
Q psy8152 313 DYMQ-SRLTSILVR 325 (444)
Q Consensus 313 ~~~~-~~i~~~~~~ 325 (444)
+... ..+++++|.
T Consensus 236 i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 236 VKLPVDKTTSCCFG 249 (297)
T ss_dssp EECSSSBEEEEEEE
T ss_pred EECCCCCceEEEEe
Confidence 8754 678999997
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.52 E-value=3.8e-12 Score=126.88 Aligned_cols=243 Identities=9% Similarity=0.033 Sum_probs=160.0
Q ss_pred CcccceEEEeeeccCCcEEEEEE-----cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCc------
Q psy8152 40 TNKASVLALNWGNVEESELLIAY-----SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGD------ 108 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~-----~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~------ 108 (444)
+|...+..++|| |++++||.+. ....|++||+.+++.+.. ..........+++ +++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~S-pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFS-RDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEEC-TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEEC-CCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 466688999999 7999888533 235799999999986543 2222222345678 9999988887743
Q ss_pred -------EEEEEcCCCCc----cccccc-cCCCeEEEEEeccCCEEEEeeC----CCeEEEEEcCCce-eeeeeecccce
Q psy8152 109 -------VKLWRYKTEPD----QWTNFN-VGPQLECMKHNKHSNIIATGGK----ENDLKLWDLNTTK-NIFSAKNVSHR 171 (444)
Q Consensus 109 -------i~iw~~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~vwd~~~~~-~~~~~~~~~~~ 171 (444)
|++|++.+++. +..... |...+..+.|+|++++|+.... .+.|+++++.++. ....+..+..
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~- 281 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD- 281 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-
Confidence 99999887653 212222 4455788999999998865432 3589999998753 3333333333
Q ss_pred eeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeC---CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEE
Q psy8152 172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSK---QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYV 247 (444)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 247 (444)
..... +++++..|+ +... .+.|..+++. .........+..+...+. .|++++++|
T Consensus 282 -----------------~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~~~~~--~~s~~g~~l 340 (693)
T 3iuj_A 282 -----------------ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA-NPGPAHWRDLIPERQQVL--TVHSGSGYL 340 (693)
T ss_dssp -----------------SCEEE-EEEETTEEEEEECTTCTTCEEEEEETT-SCCGGGCEEEECCCSSCE--EEEEETTEE
T ss_pred -----------------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC-CCCccccEEEecCCCCEE--EEEEECCEE
Confidence 23443 566665554 4433 3689999998 222222345566665554 889999888
Q ss_pred EEEcCCC---cEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEECC----CcEEEEEcCCCce
Q psy8152 248 IVGSTTG---DMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSLD----RHFRVHDFHSKKL 309 (444)
Q Consensus 248 ~~~~~dg---~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~d----g~i~vw~~~~~~~ 309 (444)
+....++ .|++|++.. .....+. ...+.+..+.+++++..|+....+ ++|+.|++.+++.
T Consensus 341 v~~~~~~g~~~l~~~d~~g--~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 341 FAEYMVDATARVEQFDYEG--KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEEEETTEEEEEEECTTS--CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEEEEECCeeEEEEEECCC--CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 7765544 688998875 3444444 344567778888888766555444 7899999987654
No 219
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.50 E-value=3.2e-12 Score=115.46 Aligned_cols=294 Identities=10% Similarity=0.022 Sum_probs=186.6
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
.+..|++++.++.|..|+ .+++.. .... .+...+.++... ++ ..|+.++.+ |..|+. +++....+...
T Consensus 29 ~~g~l~v~t~~~~l~~~d-~~g~~~----~~~~--~~~~~~~~~~~~-~~-g~l~v~t~~--l~~~d~-~g~~~~~~~~~ 96 (330)
T 3hxj_A 29 KNGTIYLGSSNKNLYAIN-TDGSVK----WFFK--SGEIIECRPSIG-KD-GTIYFGSDK--VYAINP-DGTEKWRFDTK 96 (330)
T ss_dssp TTSCEECSSTTTTTEEEC-TTSCEE----ESSC--GGGEEEECCEET-TT-TEECCSSCE--EEEECC-CGGGGGGSCC-
T ss_pred cCCeEEEEcCCCEEEEEC-CCCcEE----EEEe--cCCCcccceEEe-cC-CcEEEecCc--EEEECC-CCcEEEEEECC
Confidence 356788999899999999 666631 1111 233455666666 34 456666554 888886 66666555432
Q ss_pred cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152 85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS 164 (444)
Q Consensus 85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 164 (444)
........+. +..|.+++.++.|..++.. ++...........+.++...+++. |+.++.++.|..+|.. ++.+..
T Consensus 97 ~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~ 171 (330)
T 3hxj_A 97 KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWR 171 (330)
T ss_dssp ----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEE
T ss_pred CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEE
Confidence 2111112222 6677888889999999988 766654444455566777766665 6667778999999998 777666
Q ss_pred eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152 165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS 244 (444)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 244 (444)
+..... .+.++...+++.+++. + +.|..|| . ....+..+......+.++...++|
T Consensus 172 ~~~~~~------------------~~~~~~~d~~g~l~v~-t--~~l~~~d-~---~g~~~~~~~~~~~~~~~~~~~~~g 226 (330)
T 3hxj_A 172 FKTNDA------------------ITSAASIGKDGTIYFG-S--DKVYAIN-P---DGTEKWNFYAGYWTVTRPAISEDG 226 (330)
T ss_dssp EECSSC------------------CCSCCEECTTCCEEEE-S--SSEEEEC-T---TSCEEEEECCSSCCCSCCEECTTS
T ss_pred EecCCC------------------ceeeeEEcCCCEEEEE-e--CEEEEEC-C---CCcEEEEEccCCcceeceEECCCC
Confidence 554333 4666777777765544 4 7899999 5 455566666566678888898887
Q ss_pred CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC-CceeEEE
Q psy8152 245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ-SRLTSIL 323 (444)
Q Consensus 245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-~~i~~~~ 323 (444)
. |.+++.++.|..++. + ++.+..+......+..+.+.+++ .|..++.+|.|..++. +++.+...... ..+.++.
T Consensus 227 ~-l~v~t~~~gl~~~~~-~-g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~ 301 (330)
T 3hxj_A 227 T-IYVTSLDGHLYAINP-D-GTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPV 301 (330)
T ss_dssp C-EEEEETTTEEEEECT-T-SCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCE
T ss_pred e-EEEEcCCCeEEEECC-C-CCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceE
Confidence 5 455666778888874 4 66666666444444556665555 5667788889999996 67766655432 2233333
Q ss_pred EcCCCcccccchhhhhccccccCCCccccCCC
Q psy8152 324 VRSDFSLENETKKEEQEHSEEKGDSDEKYDPE 355 (444)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~ 355 (444)
.. ++ ..+..++.+|.+.+....
T Consensus 302 ~d---------~~-g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 302 ID---------EN-GTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp EC---------TT-CCEEEECTTSCEEEEEC-
T ss_pred Ec---------CC-CEEEEEcCCCeEEEEecc
Confidence 32 22 234446677777765544
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.50 E-value=7.4e-12 Score=116.27 Aligned_cols=227 Identities=9% Similarity=0.001 Sum_probs=149.9
Q ss_pred EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC--eEEEEEcCCceeeeee---
Q psy8152 91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN--DLKLWDLNTTKNIFSA--- 165 (444)
Q Consensus 91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~--- 165 (444)
++++++++++++...++.|++|++.++.... +........ ++|+|+++.|+++..++ .|.+|+...+.....+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~-~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~ 213 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTT-VHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQL 213 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEE-EEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEE-eeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeec
Confidence 4556788877777778999999998776653 333233334 99999999888888765 7888888765433222
Q ss_pred ec-ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEE-----eCCCCCe--eE
Q psy8152 166 KN-VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKV-----DIPDVAL--SC 237 (444)
Q Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~~~~i--~~ 237 (444)
.. .. ..+.+++++|++..|+++..++.|+.||.. ... ...+ .+....- ..
T Consensus 214 ~~~~~------------------~~p~~iav~p~~g~lyv~d~~~~I~~~d~~---~~~-~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 214 GSTFS------------------GKIGAVALDETEEWLYFVDSNKNFGRFNVK---TQE-VTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp CTTSC------------------SCCCBCEECTTSSEEEEECTTCEEEEEETT---TCC-EEEEEECCCCSCCCCSSCCE
T ss_pred cchhc------------------CCcEEEEEeCCCCeEEEEECCCcEEEEECC---CCC-EEEEecccccCCCCCCcccc
Confidence 01 11 247889999955555557778899999988 322 2222 1222222 39
Q ss_pred EEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEecccc---------------CceeEEEecCCCCEEEEEE-CCCcEE
Q psy8152 238 ITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA---------------GCVKDIACPLNENLILSVS-LDRHFR 300 (444)
Q Consensus 238 ~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~---------------~~i~~~~~s~~~~~l~s~~-~dg~i~ 300 (444)
++|+|+ +.++++....+.|+.|+... . +..+.++. .....++++|+|+++++-+ .++.|+
T Consensus 272 ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 999995 66666777788999998764 3 33333332 3478999999999777777 789999
Q ss_pred EEEcCCCceEEEeec---------------CCceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 301 VHDFHSKKLLRKDYM---------------QSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 301 vw~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
.|++.++.......+ -.....+++.++ +.++++....+.|+.+.
T Consensus 349 ~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~---------g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 349 KLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE---------GGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp EEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS---------SEEEEEESTTCEEEEEE
T ss_pred EEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC---------CCEEEEECCCCeEEEEE
Confidence 999888775443333 123556666543 35555555555565443
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.50 E-value=1.3e-11 Score=110.24 Aligned_cols=227 Identities=8% Similarity=-0.014 Sum_probs=147.7
Q ss_pred CcccceEEEeeeccCCc-EEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCC
Q psy8152 40 TNKASVLALNWGNVEES-ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEP 118 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 118 (444)
.+.......+|+ ++++ +++++..++.|..|+. +++. ..+...........+.++|+++++....+.|.+|+.. ++
T Consensus 42 ~~~~~~egp~~~-~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 42 DQATWSEGPAWW-EAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp CCCSSEEEEEEE-GGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cCCcCccCCeEe-CCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 345567889999 6777 5666777899999998 4543 3333222223334556788866665566789999976 54
Q ss_pred cccccccc-----CCCeEEEEEeccCCEEEE----eeC-------------CCeEEEEEcCCceeeeeeecccceeeEee
Q psy8152 119 DQWTNFNV-----GPQLECMKHNKHSNIIAT----GGK-------------ENDLKLWDLNTTKNIFSAKNVSHRVLVYS 176 (444)
Q Consensus 119 ~~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 176 (444)
... +..+ ...+..+++.|+|+++++ |.. .+.|..|+..+++..... ...
T Consensus 118 ~~~-~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~------- 188 (305)
T 3dr2_A 118 AHL-LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD------- 188 (305)
T ss_dssp EEE-EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES-------
T ss_pred EEE-EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC-------
Confidence 332 2211 234678999999998886 432 246777777665543322 211
Q ss_pred eCCCcccccCccceeEEEEecCCCEEEEEeCC------ceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEE
Q psy8152 177 VKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ------GYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIV 249 (444)
Q Consensus 177 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~ 249 (444)
....++|+|+++.|+++... +.|++|++. .........+ .........+++.++|++. +
T Consensus 189 ------------~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v 254 (305)
T 3dr2_A 189 ------------HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR-DGALHDRRHFASVPDGLPDGFCVDRGGWLW-S 254 (305)
T ss_dssp ------------SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE-TTEEEEEEEEECCSSSCCCSEEECTTSCEE-E
T ss_pred ------------CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec-CCCccCCeEEEECCCCCCCeEEECCCCCEE-E
Confidence 36789999999877776654 789999987 1110111111 1123345679999999844 4
Q ss_pred EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152 250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDR 297 (444)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg 297 (444)
++.+ .|.+|+. . ++.+..+..+. .+.+++|+|+++.|+.++.++
T Consensus 255 ~~~~-gv~~~~~-~-g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 255 SSGT-GVCVFDS-D-GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp CCSS-EEEEECT-T-SCEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred ecCC-cEEEECC-C-CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 4444 4999997 4 67777777544 588999999998888877764
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.50 E-value=5.4e-12 Score=124.98 Aligned_cols=293 Identities=9% Similarity=0.025 Sum_probs=186.8
Q ss_pred CcEEEEEEcCCeEEEEeCCCCccccceeeccccc--------cE-EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152 55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG--------DI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN 125 (444)
Q Consensus 55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~--------~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 125 (444)
+..|++++.++.|+.+|..+|+.+..+....... .+ ..+...+..|++++.++.|..+|..+++.++....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 5678888888999999999999888775322110 00 12234567888899999999999999998874433
Q ss_pred c--CCCeEEEEEec--cCCEEEEee------CCCeEEEEEcCCceeeeeeecccce-eeEee-----eCCCcccc-----
Q psy8152 126 V--GPQLECMKHNK--HSNIIATGG------KENDLKLWDLNTTKNIFSAKNVSHR-VLVYS-----VKPDEFDL----- 184 (444)
Q Consensus 126 ~--~~~v~~~~~~~--~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~----- 184 (444)
. ......+..+| .+..+++++ .++.|+.||..+|+.+..+...... ..... ........
T Consensus 150 ~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~ 229 (689)
T 1yiq_A 150 RADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVE 229 (689)
T ss_dssp CSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHH
T ss_pred cCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeee
Confidence 1 11111111122 233455554 3689999999999998877532110 00000 00000000
Q ss_pred --cCccceeEEEEecCCCEEEEEeCCce-------------------EEEEEcCCCCCccceEEEeC--CC-------CC
Q psy8152 185 --RRPVWVNGISFLPNSDKVAVCSKQGY-------------------VRVYDPKITTQRRPVLKVDI--PD-------VA 234 (444)
Q Consensus 185 --~~~~~i~~~~~~~~~~~l~~~~~d~~-------------------i~i~d~~~~~~~~~~~~~~~--~~-------~~ 234 (444)
........+++.|+..+|++++.++. |..||.. +++.+..+.. |. .+
T Consensus 230 ~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~---TG~~~W~~~~~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 230 QGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNAD---TGEYVWHYQTTPGDAWDYTATQH 306 (689)
T ss_dssp HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETT---TCCEEEEEESSTTCCSCCCCCSC
T ss_pred cCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEcc---CCceeEeeecCCcccccccCCCC
Confidence 00001136788998889999888864 9999999 7777777664 21 11
Q ss_pred eeEEEEccCCC---EEEEEcCCCcEEEEEcCCCCcceeEecccc----------------------------C-------
Q psy8152 235 LSCITTTNQSH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFA----------------------------G------- 276 (444)
Q Consensus 235 i~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~----------------------------~------- 276 (444)
+.......+|+ .|+.++.+|.++++|..+ ++++....-.. .
T Consensus 307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred cEEEeeccCCcEEEEEEEECCCCeEEEEECCC-CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 11222223564 788999999999999999 98874432100 0
Q ss_pred ----ceeEEEecCCCCEEEEEEC---------------------------------------------CCcEEEEEcCCC
Q psy8152 277 ----CVKDIACPLNENLILSVSL---------------------------------------------DRHFRVHDFHSK 307 (444)
Q Consensus 277 ----~i~~~~~s~~~~~l~s~~~---------------------------------------------dg~i~vw~~~~~ 307 (444)
.-..++|+|+..+|++... +|.|+.||+.++
T Consensus 386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG 465 (689)
T 1yiq_A 386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ 465 (689)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence 0112688888887776532 377999999999
Q ss_pred ceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152 308 KLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 308 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
+.+.+..+..+.....+. ..+.++..++.|+.++.||..+++.+
T Consensus 466 ~~~W~~~~~~~~~~g~~~---------tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 466 QAAWEVPYVTIFNGGTLS---------TAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEEEESSSCCCCEEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CeEeEccCCCCccCccce---------ECCCEEEEECCCCcEEEEECCCCccc
Confidence 998887765554332322 23467788899999999999987765
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.49 E-value=4.9e-11 Score=107.48 Aligned_cols=222 Identities=8% Similarity=-0.078 Sum_probs=145.3
Q ss_pred ceEEEeeeccC-CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCcc
Q psy8152 44 SVLALNWGNVE-ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQ 120 (444)
Q Consensus 44 ~v~~~~~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 120 (444)
...+.+|+ ++ +.++++...++.|.+|+..+++.. .+.. ...+.+ ++++++++++. . ..|.+|+..+++..
T Consensus 50 ~~egp~~~-~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~---~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFD-PASGTAWWFNILERELHELHLASGRKT-VHAL---PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEE-TTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC---SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEE
T ss_pred CCcCCeEe-CCCCEEEEEECCCCEEEEEECCCCcEE-EEEC---CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEE
Confidence 34678899 55 556666667899999999876543 2222 233444 46788776654 4 45999998887754
Q ss_pred cccccc-----CCCeEEEEEeccCCEEEEeeC------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152 121 WTNFNV-----GPQLECMKHNKHSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW 189 (444)
Q Consensus 121 ~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (444)
. +... ...+.+++++|+|+++++... .+.|..++ +++... +..... .
T Consensus 123 ~-~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~------------------~ 180 (326)
T 2ghs_A 123 L-HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADIS------------------I 180 (326)
T ss_dssp E-EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEES------------------S
T ss_pred E-EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCc------------------c
Confidence 2 2211 235889999999987665542 24555555 444322 211111 3
Q ss_pred eeEEEEecCCCEEEE-EeCCceEEEEEcC-CCC-Cc---cceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 190 VNGISFLPNSDKVAV-CSKQGYVRVYDPK-ITT-QR---RPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 190 i~~~~~~~~~~~l~~-~~~d~~i~i~d~~-~~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
...++|+|+++.|+. .+.++.|.+|++. ..+ .. +.+..+......+..+++.++|+++++....+.|.+|+. .
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~ 259 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D 259 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C
Confidence 678999999986654 4567899999974 111 11 122223233455678999999988777766788999998 5
Q ss_pred CCcceeEeccccCceeEEEec-CCCCEEEEEECC
Q psy8152 264 KGKPCYKYKGFAGCVKDIACP-LNENLILSVSLD 296 (444)
Q Consensus 264 ~~~~~~~~~~h~~~i~~~~~s-~~~~~l~s~~~d 296 (444)
++.+..+..+...+++++|+ |+++.|+.++..
T Consensus 260 -g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 260 -GNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp -CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred -CCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 77777777666779999998 888766555443
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.48 E-value=4.8e-12 Score=125.08 Aligned_cols=292 Identities=11% Similarity=0.046 Sum_probs=190.7
Q ss_pred CcEEEEEEcCCeEEEEeCCCCccccceeeccccc---------cEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152 55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG---------DIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN 125 (444)
Q Consensus 55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~---------~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 125 (444)
+..|++++.++.|+.+|..+|+.+..+....... ....+...+..|++++.++.|..+|..+++.++.+..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence 5677778888999999999999887775432110 0112334677888899999999999999998875443
Q ss_pred c-C----CCeEEEEEeccCCEEEEeeC------CCeEEEEEcCCceeeeeeecccceeeEeeeC-------------CCc
Q psy8152 126 V-G----PQLECMKHNKHSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVK-------------PDE 181 (444)
Q Consensus 126 ~-~----~~v~~~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 181 (444)
+ . ..+.+.-.. .+..+++++. ++.|+.||..+++.+..+............. .+.
T Consensus 157 ~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~ 235 (677)
T 1kb0_A 157 FEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKW 235 (677)
T ss_dssp TTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCH
T ss_pred CcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCce
Confidence 3 1 122211111 2445666553 6999999999999998876533210000000 000
Q ss_pred ccc-cCccceeEEEEecCCCEEEEEeCCc-------------------eEEEEEcCCCCCccceEEEeC--CC-------
Q psy8152 182 FDL-RRPVWVNGISFLPNSDKVAVCSKQG-------------------YVRVYDPKITTQRRPVLKVDI--PD------- 232 (444)
Q Consensus 182 ~~~-~~~~~i~~~~~~~~~~~l~~~~~d~-------------------~i~i~d~~~~~~~~~~~~~~~--~~------- 232 (444)
... ........+++.|++.+|++++.++ .|..+|.. +++.+..+.. |.
T Consensus 236 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~---TG~~~W~~~~~~~d~wd~~~~ 312 (677)
T 1kb0_A 236 WEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPD---TGKYKWHYQETPGDNWDYTST 312 (677)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT---TCCEEEEEESSTTCCSCCCCC
T ss_pred eEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECC---CCCEEEEEecCCCcccccccC
Confidence 000 0001123578899888888887765 58899988 7777776653 21
Q ss_pred CCeeEEEEccCC---CEEEEEcCCCcEEEEEcCCCCcceeEecccc-----------Cce--------------------
Q psy8152 233 VALSCITTTNQS---HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-----------GCV-------------------- 278 (444)
Q Consensus 233 ~~i~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-----------~~i-------------------- 278 (444)
.....+....+| ..|+.++.+|.|+++|..+ ++++..+.... .++
T Consensus 313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG 391 (677)
T ss_dssp SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred CCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence 112223333467 6889999999999999999 99887665211 011
Q ss_pred ----eEEEecCCCCEEEEEECC-------------------------------------------CcEEEEEcCCCceEE
Q psy8152 279 ----KDIACPLNENLILSVSLD-------------------------------------------RHFRVHDFHSKKLLR 311 (444)
Q Consensus 279 ----~~~~~s~~~~~l~s~~~d-------------------------------------------g~i~vw~~~~~~~~~ 311 (444)
..++|+|+..++++...+ |.|..||+.+++.+.
T Consensus 392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 146888988888775432 789999999999988
Q ss_pred EeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152 312 KDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 312 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
++.+..++....+. ..+..++.++.++.+++||..+++.+
T Consensus 472 ~~~~~~~~~~g~~~---------~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 472 SVEHVSPWNGGTLT---------TAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEEESSSCCCCEEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ecCCCCCCcCcceE---------eCCCEEEEECCCCcEEEEECCCCcee
Confidence 88766554443333 22356677789999999999877754
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.41 E-value=1.3e-13 Score=126.45 Aligned_cols=196 Identities=10% Similarity=0.003 Sum_probs=119.9
Q ss_pred CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEe
Q psy8152 96 YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVY 175 (444)
Q Consensus 96 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 175 (444)
++.++++++.++.|+.||..+++.++.+.. ..+.+..+..++..+++++.|+.|+.||..+++.+..+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~---- 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE---- 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc----
Confidence 578899999999999999999999875544 55666656667778888889999999999988876665432210
Q ss_pred eeCCCcccccCcccee-EEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC
Q psy8152 176 SVKPDEFDLRRPVWVN-GISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG 254 (444)
Q Consensus 176 ~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 254 (444)
.+. +..+. .+..|++++.++.|+.||.. +++.+..+..+. ...++|.+..|++++.++
T Consensus 82 -------------~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~---tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg 140 (369)
T 2hz6_A 82 -------------LVQASPCRS-SDGILYMGKKQDIWYVIDLL---TGEKQQTLSSAF----ADSLSPSTSLLYLGRTEY 140 (369)
T ss_dssp -------------HHTTCSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEEEE
T ss_pred -------------ccccCceEe-cCCEEEEEeCCCEEEEEECC---CCcEEEEecCCC----cccccccCCEEEEEecCC
Confidence 010 00111 24567788889999999998 677776665443 244567888999999999
Q ss_pred cEEEEEcCCCCcceeEeccccCceeEEEecCCC---CEEEEEECCCcEEEEEcCCCceEEEeecCCceeE
Q psy8152 255 DMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE---NLILSVSLDRHFRVHDFHSKKLLRKDYMQSRLTS 321 (444)
Q Consensus 255 ~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~---~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i~~ 321 (444)
.|+.||.++ ++.+..+..+. ....++.++. ..+++++.+|.|+.||..+++.+.+.....++..
T Consensus 141 ~v~a~d~~t-G~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~ 207 (369)
T 2hz6_A 141 TITMYDTKT-RELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVA 207 (369)
T ss_dssp EEECCCSSS-SSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEE
T ss_pred EEEEEECCC-CCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEE
Confidence 999999999 98887775321 2233344432 5677789999999999999999888776666654
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.41 E-value=3.5e-10 Score=104.09 Aligned_cols=268 Identities=13% Similarity=0.076 Sum_probs=176.6
Q ss_pred CcEEEEEEcCCeEEEEeCCCCccccceeeccc-------cccE-EEEEeCCCeEEEEecCCcEEEEEcCCCCcccccccc
Q psy8152 55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-------EGDI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV 126 (444)
Q Consensus 55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-------~~~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 126 (444)
+..|++++.++.|..||..+++.+..+..... ...+ ......+..+++++.++.|..+|..+++.++.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 67888888889999999999998877654321 1122 333456778888999999999999999987644332
Q ss_pred CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe
Q psy8152 127 GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS 206 (444)
Q Consensus 127 ~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 206 (444)
......... .+..+++++.++.|..+|..+++.+........... .. ........ +..+++++
T Consensus 133 ~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~---~~----------~~~~~~~~--~~~v~~g~ 195 (376)
T 3q7m_A 133 GEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLS---LR----------GESAPTTA--FGAAVVGG 195 (376)
T ss_dssp SCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC--------C----------CCCCCEEE--TTEEEECC
T ss_pred CceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCcee---ec----------CCCCcEEE--CCEEEEEc
Confidence 221112222 245788888899999999999998877654332000 00 00112222 35677888
Q ss_pred CCceEEEEEcCCCCCccceEEEeCCCCC----------e-eEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc
Q psy8152 207 KQGYVRVYDPKITTQRRPVLKVDIPDVA----------L-SCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA 275 (444)
Q Consensus 207 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~----------i-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~ 275 (444)
.++.|..+|.. .++.+......... + ....+ .+..+++++.++.|..+|..+ ++.+.....
T Consensus 196 ~~g~l~~~d~~---tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~t-G~~~w~~~~-- 267 (376)
T 3q7m_A 196 DNGRVSAVLME---QGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRS-GQIMWKREL-- 267 (376)
T ss_dssp TTTEEEEEETT---TCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTT-CCEEEEECC--
T ss_pred CCCEEEEEECC---CCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCC-CcEEeeccC--
Confidence 89999999998 66666655432110 1 11111 245778888899999999999 888877652
Q ss_pred CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCC-ceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQS-RLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~-~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
.....+.. .+..|+.++.++.|..+|..+++.+.... ... .+...... +..+..++.+|.+.+++
T Consensus 268 ~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-----------~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 268 GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY-----------NGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE-----------TTEEEEECTTSEEEEEE
T ss_pred CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE-----------CCEEEEEeCCCeEEEEE
Confidence 23344444 36678888899999999999999877654 222 12222211 24566677788999999
Q ss_pred CCccccc
Q psy8152 354 PEHFEMN 360 (444)
Q Consensus 354 ~~~~~~~ 360 (444)
..+++..
T Consensus 335 ~~tG~~~ 341 (376)
T 3q7m_A 335 VEDGRFV 341 (376)
T ss_dssp TTTCCEE
T ss_pred CCCCcEE
Confidence 8877654
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.40 E-value=5.1e-10 Score=101.90 Aligned_cols=223 Identities=11% Similarity=0.014 Sum_probs=144.7
Q ss_pred CCcEEE-EEEcCCeEEEEeCCCC----cccccee---ec---cc-cccEEEEEeCCCeEEEEecC------CcEEEEEcC
Q psy8152 54 EESELL-IAYSGQKIKIYDTDFK----NFNTNTD---VS---FG-EGDIVGVSRYDECILTAVKS------GDVKLWRYK 115 (444)
Q Consensus 54 ~~~~l~-~~~~d~~i~vw~~~~~----~~~~~~~---~~---~~-~~~v~~~s~~~~~l~~~~~d------g~i~iw~~~ 115 (444)
+.++|+ .+..+++|+|+|+.+. +..+.+. +. +. ...-..+.|+| +++++..+ +.|.++|..
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 455555 4666799999998755 3444331 00 11 11113456888 77766655 789999999
Q ss_pred CCCcccccccc--C-CCeEEEEEeccCCEEEEee-------------------CCCeEEEEEcCCceeeeeeecccceee
Q psy8152 116 TEPDQWTNFNV--G-PQLECMKHNKHSNIIATGG-------------------KENDLKLWDLNTTKNIFSAKNVSHRVL 173 (444)
Q Consensus 116 ~~~~~~~~~~~--~-~~v~~~~~~~~~~~l~~~~-------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~ 173 (444)
+.+.+...... . .--+.+.|+|+++.+++.. ...+|.+||+.+++.+.++.....
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~--- 249 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE--- 249 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---
Confidence 99888644422 1 2234688899999888884 368999999999887777654311
Q ss_pred EeeeCCCcccccCccceeEEEE--ecCCCEEEEEe------CCceEEEEEcCCCCCccceEEE--eCC------------
Q psy8152 174 VYSVKPDEFDLRRPVWVNGISF--LPNSDKVAVCS------KQGYVRVYDPKITTQRRPVLKV--DIP------------ 231 (444)
Q Consensus 174 ~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~--~~~------------ 231 (444)
......+.| +|+++++.+++ .+++|.+|... .+.......+ ...
T Consensus 250 -------------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d-~g~~~~~~vIdi~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 250 -------------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE-DGKWNAEKVIEIPAEPLEGNLPEILKP 315 (462)
T ss_dssp -------------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE-TTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred -------------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec-CCceeEEEEEeCCCccccccccccccc
Confidence 012455656 99998877666 56788877665 2222222211 110
Q ss_pred ----CCCeeEEEEccCCCEEEEEcC-CCcEEEEEcCCC--CcceeEecccc--------------CceeEEEecCCCCEE
Q psy8152 232 ----DVALSCITTTNQSHYVIVGST-TGDMMAVDLRGK--GKPCYKYKGFA--------------GCVKDIACPLNENLI 290 (444)
Q Consensus 232 ----~~~i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~--~~~~~~~~~h~--------------~~i~~~~~s~~~~~l 290 (444)
......|.++|+|++|+++.. .+.|.+||+..+ .+.+..+.-.. +.-..++++|+|++|
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~L 395 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRV 395 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEE
Confidence 234678999999999887554 678999998641 24444444210 125789999999999
Q ss_pred EEEE
Q psy8152 291 LSVS 294 (444)
Q Consensus 291 ~s~~ 294 (444)
+++.
T Consensus 396 yVaN 399 (462)
T 2ece_A 396 YVTN 399 (462)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9887
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=2.3e-11 Score=110.48 Aligned_cols=266 Identities=8% Similarity=-0.015 Sum_probs=160.7
Q ss_pred cceEEEeeeccCCcEEEEEEc--CCeEEEEeCCCCcccccee-----eccccccEEEE--EeCCCeEEEEec-----CCc
Q psy8152 43 ASVLALNWGNVEESELLIAYS--GQKIKIYDTDFKNFNTNTD-----VSFGEGDIVGV--SRYDECILTAVK-----SGD 108 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~-----~~~~~~~v~~~--s~~~~~l~~~~~-----dg~ 108 (444)
..+..++++ ++++.+++... ++.++||.+.+++.. .+. ...+-..+.++ .++++++++-.. .+.
T Consensus 17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 678999999 78888888642 343556655444432 111 11233455555 456666555433 578
Q ss_pred EEEEEcCCCCcccccc------ccCCCeEEEEEeccC-CEEEEee---CCCeEEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152 109 VKLWRYKTEPDQWTNF------NVGPQLECMKHNKHS-NIIATGG---KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVK 178 (444)
Q Consensus 109 i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~-~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (444)
|.+||+.+++.+..+. .+...+..+++++++ ..+++.. .++.|.+||+.+++....+..+.. +.
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~------~~ 168 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG------IA 168 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT------TS
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc------cc
Confidence 9999999887553222 123456899999854 4445544 578999999998876655543222 00
Q ss_pred CCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC-cEE
Q psy8152 179 PDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG-DMM 257 (444)
Q Consensus 179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~i~ 257 (444)
.....+.+++..+.+...++.++.|.. .+..|+|+|++++|+++...+ .|+
T Consensus 169 -----------~~~~~~~~~g~~~~~~~~~g~~~~~~~-----------------~~~gia~s~dg~~ly~~~~~~~~l~ 220 (343)
T 2qe8_A 169 -----------PEDIDLVIDGVPVQIGQPDGTVIRPHL-----------------GVNGIVLDAENEWLYLSPMHSTSMY 220 (343)
T ss_dssp -----------CCSCCCEETTEECBEECTTSCEECCCC-----------------CEEEEEECTTSCEEEEEESSCSEEE
T ss_pred -----------ccccceeECCEEEEeccCCCceeceec-----------------ccceeEeccCCCEEEEEeCCCCeEE
Confidence 001334456666666666666654421 257899999999888876665 455
Q ss_pred EEEcCC--CCc-----cee--EeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec--CCceeEEEEcC
Q psy8152 258 AVDLRG--KGK-----PCY--KYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM--QSRLTSILVRS 326 (444)
Q Consensus 258 iwd~~~--~~~-----~~~--~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~--~~~i~~~~~~~ 326 (444)
.++... .+. ... ...++.+....++++++|.++++....+.|.+|+..+++....... ...+.++++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGS 300 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECT
T ss_pred EEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECC
Confidence 554321 011 111 1123444567899999999999988899999999856664333222 34567888764
Q ss_pred CCcccccchhhhhccccccCCCccccC
Q psy8152 327 DFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 327 ~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
+ +.+.++.+..+.+.+|.
T Consensus 301 ~---------g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 301 D---------GYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp T---------SCEEEEECCGGGSGGGB
T ss_pred C---------CcEEEEeCccccccccc
Confidence 3 34555555444444443
No 229
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.38 E-value=2.5e-10 Score=112.80 Aligned_cols=293 Identities=13% Similarity=0.102 Sum_probs=184.8
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccC-----cc-cce-EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYIT-----NK-ASV-LALNWGNVEESELLIAYSGQKIKIYDTDFKNFN 78 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~-----h~-~~v-~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~ 78 (444)
+..|++++.++.|+.+|..+++..-+ +. ..... +. ..+ ..+++. +..|++++.++.|+.+|..+|+.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~-~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWR-YD-PEVAKVKARTSCCDAVNRGVALW---GDKVYVGTLDGRLIALDAKTGKAI 140 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEE-EC-CCCCGGGGGGCTTCSCCCCCEEE---BTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceE-EC-CCCCccccccccccCCccceEEE---CCEEEEEcCCCEEEEEECCCCCEe
Confidence 46788888899999999988885211 11 11000 00 001 122333 568888899999999999999998
Q ss_pred cceeecccc--ccEEE-EEeCCCeEEEEec------CCcEEEEEcCCCCcccccccc-----------------------
Q psy8152 79 TNTDVSFGE--GDIVG-VSRYDECILTAVK------SGDVKLWRYKTEPDQWTNFNV----------------------- 126 (444)
Q Consensus 79 ~~~~~~~~~--~~v~~-~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~----------------------- 126 (444)
..+...... ..+.+ -...+..++++.. +|.|+.+|..+++.++.+...
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred eeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 877642111 01100 0012445555543 589999999999988744311
Q ss_pred --------CCCeEEEEEeccCCEEEEeeCCC-------------------eEEEEEcCCceeeeeeecccceeeEeeeCC
Q psy8152 127 --------GPQLECMKHNKHSNIIATGGKEN-------------------DLKLWDLNTTKNIFSAKNVSHRVLVYSVKP 179 (444)
Q Consensus 127 --------~~~v~~~~~~~~~~~l~~~~~d~-------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 179 (444)
......+++.|...+++.++.++ .|..+|..+++.+..++...+
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~--------- 291 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPG--------- 291 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT---------
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCC---------
Confidence 01112468888778888887765 399999999999888765432
Q ss_pred CcccccCccceeEEEEecCCC---EEEEEeCCceEEEEEcCCCCCccceEEEeCCC------------C-----------
Q psy8152 180 DEFDLRRPVWVNGISFLPNSD---KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD------------V----------- 233 (444)
Q Consensus 180 ~~~~~~~~~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------------~----------- 233 (444)
+..+.....++....+..+++ .++.++.+|.++++|.. +++.+....... .
T Consensus 292 ~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~ 368 (668)
T 1kv9_A 292 DSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT---NGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEK 368 (668)
T ss_dssp CCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSS
T ss_pred ccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECC---CCCEeccccccccccccccccccCCccccccccccC
Confidence 000100111222223334664 68899999999999988 555553322111 0
Q ss_pred -------------CeeEEEEccCCCEEEEE------------------------------------cCCCcEEEEEcCCC
Q psy8152 234 -------------ALSCITTTNQSHYVIVG------------------------------------STTGDMMAVDLRGK 264 (444)
Q Consensus 234 -------------~i~~~~~~~~~~~l~~~------------------------------------~~dg~i~iwd~~~~ 264 (444)
.-..++++|+..++++. ..+|.|+.||+.+
T Consensus 369 ~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t- 447 (668)
T 1kv9_A 369 EPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK- 447 (668)
T ss_dssp SCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-
T ss_pred CeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC-
Confidence 01126788876665541 1237899999999
Q ss_pred CcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC
Q psy8152 265 GKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS 317 (444)
Q Consensus 265 ~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~ 317 (444)
++.+.++..+ .++....+...+.+++.++.++.|++||..+++.+.++....
T Consensus 448 G~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 448 QKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 9998887643 233333444567889999999999999999999998876443
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.37 E-value=3.1e-13 Score=123.98 Aligned_cols=223 Identities=13% Similarity=0.048 Sum_probs=125.2
Q ss_pred CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCC-CeE-
Q psy8152 54 EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGP-QLE- 131 (444)
Q Consensus 54 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~v~- 131 (444)
.+..|++++.|+.|+.||..+|+.+..+.. + ......+..++..+++++.++.|+.||..+++.++....+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~-~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D-PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C-CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C-CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 478899999999999999999999888764 1 111112345677788888999999999998887653322211 111
Q ss_pred EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceE
Q psy8152 132 CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYV 211 (444)
Q Consensus 132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 211 (444)
+..+. .+..+++++.++.|+.||..+|+.+..+..+.. ..++|.+..+++++.++.|
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----------------------~~~~p~~~~v~~~~~dg~v 142 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----------------------DSLSPSTSLLYLGRTEYTI 142 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------------------------EEEEEEEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----------------------ccccccCCEEEEEecCCEE
Confidence 01111 345778888899999999999998877654322 2345677889999999999
Q ss_pred EEEEcCCCCCccceEEEeCCCCCeeEEEEccCC---CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeE-EEecCCC
Q psy8152 212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQS---HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD-IACPLNE 287 (444)
Q Consensus 212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~-~~~s~~~ 287 (444)
+.||.+ +++.+..+..+. ....++.++. ..+++++.+|.|+.||..+ ++.+.++.. ..++.. ..+++++
T Consensus 143 ~a~d~~---tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t-G~~~W~~~~-~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 143 TMYDTK---TRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES-GDVLWIQNY-ASPVVAFYVWQREG 215 (369)
T ss_dssp ECCCSS---SSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT-CCEEEEEEC-SSCEEEEEECTTSS
T ss_pred EEEECC---CCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCC-CcEEEEecC-CCceEEEEEecCCc
Confidence 999998 555555443211 1223333322 4677788999999999999 998888773 344443 4555666
Q ss_pred CEEEE--EECCCcEEEEEcCCCc
Q psy8152 288 NLILS--VSLDRHFRVHDFHSKK 308 (444)
Q Consensus 288 ~~l~s--~~~dg~i~vw~~~~~~ 308 (444)
...+. ...++.+++++..+|+
T Consensus 216 ~~~v~~~~~~~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 216 LRKVMHINVAVETLRYLTFMSGE 238 (369)
T ss_dssp CEEECCEEEEHHHHHHHHHHHHH
T ss_pred eEeccceeecccceeeeehhcCC
Confidence 43211 0114456677776666
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=9.5e-11 Score=106.41 Aligned_cols=229 Identities=7% Similarity=-0.051 Sum_probs=146.0
Q ss_pred CcccceEEEeeeccCCcEEEEEEc-----CCeEEEEeCCCCccccceeeccc----cc--cEEEEEeCCCeE-EEEe---
Q psy8152 40 TNKASVLALNWGNVEESELLIAYS-----GQKIKIYDTDFKNFNTNTDVSFG----EG--DIVGVSRYDECI-LTAV--- 104 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~~~~~-----d~~i~vw~~~~~~~~~~~~~~~~----~~--~v~~~s~~~~~l-~~~~--- 104 (444)
.|-..+.+|++. +++.++++-.. .+.|.+||+.+++.+..+..+.. .. .-..+++++..+ ++..
T Consensus 64 ~~~~~p~gv~~d-~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSD-GNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEEC-SSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEc-CCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 466789999999 67776665443 57999999998887766654311 11 224456655454 5544
Q ss_pred cCCcEEEEEcCCCCccccccccCCCeE-EEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccc
Q psy8152 105 KSGDVKLWRYKTEPDQWTNFNVGPQLE-CMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFD 183 (444)
Q Consensus 105 ~dg~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (444)
.++.|.+|++.+++....+..|..... ...+.+++..+.+.+.++.++.|. .
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~------------- 195 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------L------------- 195 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC--------------C-------------
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee--------------c-------------
Confidence 678999999988876643333322111 134455676676677777665442 1
Q ss_pred ccCccceeEEEEecCCCEEEEEeCCc-eEEEEEcCC--CCC---ccce--EEEeCCCCCeeEEEEccCCCEEEEEcCCCc
Q psy8152 184 LRRPVWVNGISFLPNSDKVAVCSKQG-YVRVYDPKI--TTQ---RRPV--LKVDIPDVALSCITTTNQSHYVIVGSTTGD 255 (444)
Q Consensus 184 ~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~~--~~~---~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 255 (444)
.+..|+|+|+++.|+++...+ .|..++... ... .... ....++......++++++|+++++....+.
T Consensus 196 -----~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~ 270 (343)
T 2qe8_A 196 -----GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSA 270 (343)
T ss_dssp -----CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTE
T ss_pred -----ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCe
Confidence 267899999998888776655 555555320 000 0000 011123335678999999999999999999
Q ss_pred EEEEEcCCCCcceeEecc-ccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152 256 MMAVDLRGKGKPCYKYKG-FAGCVKDIACPLNENLILSVSLDRHFRVH 302 (444)
Q Consensus 256 i~iwd~~~~~~~~~~~~~-h~~~i~~~~~s~~~~~l~s~~~dg~i~vw 302 (444)
|.+||... ++....... +...+++++|.+++.++++.+..+.+.+|
T Consensus 271 V~~~d~~~-G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 271 IGVITSAD-RAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EEEEETTT-TEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred EEEEECCC-CCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 99999855 654333322 24568899999998888777655544433
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.35 E-value=8e-10 Score=99.50 Aligned_cols=212 Identities=10% Similarity=0.048 Sum_probs=136.5
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
.+..++++...+.|..|+..+++. ..+ .+...|.+++|+ ++++++++. . ..|.+|+..+++........
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~-----~~~---~~~~~v~~i~~~-~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~ 128 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRK-----TVH---ALPFMGSALAKI-SDSKQLIAS-D-DGLFLRDTATGVLTLHAELE 128 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEE-----EEE---ECSSCEEEEEEE-ETTEEEEEE-T-TEEEEEETTTCCEEEEECSS
T ss_pred CCEEEEEECCCCEEEEEECCCCcE-----EEE---ECCCcceEEEEe-CCCeEEEEE-C-CCEEEEECCCCcEEEEeeCC
Confidence 356677777889999999887652 112 124579999999 677766654 4 45999999887754332211
Q ss_pred c-c-cccEEE--EEeCCCeEEEEec------CCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEe-eCCCeEEE
Q psy8152 85 F-G-EGDIVG--VSRYDECILTAVK------SGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATG-GKENDLKL 153 (444)
Q Consensus 85 ~-~-~~~v~~--~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v 153 (444)
. . ...+.. ++++|+++++... .+.|..++ +++.. .+..+......++|+|+++.|+.+ +.++.|.+
T Consensus 129 ~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 129 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 1 1 123444 4678887665432 23455555 44433 233334457899999999876554 45789999
Q ss_pred EEcC--Cc-ee-----eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccce
Q psy8152 154 WDLN--TT-KN-----IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPV 225 (444)
Q Consensus 154 wd~~--~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 225 (444)
|++. ++ .. +..+.... ..+..+++.++|+++++....+.|.+|+.. ...+
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~~~------------------~~p~gi~~d~~G~lwva~~~~~~v~~~d~~----g~~~ 263 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTGIK------------------GGMDGSVCDAEGHIWNARWGEGAVDRYDTD----GNHI 263 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSS------------------SEEEEEEECTTSCEEEEEETTTEEEEECTT----CCEE
T ss_pred EEcccccCCcccCceEEEECCCCC------------------CCCCeeEECCCCCEEEEEeCCCEEEEECCC----CCEE
Confidence 9986 44 31 11111111 146789999999888777677899999876 3455
Q ss_pred EEEeCCCCCeeEEEEc-cCCCEEEEEcC
Q psy8152 226 LKVDIPDVALSCITTT-NQSHYVIVGST 252 (444)
Q Consensus 226 ~~~~~~~~~i~~~~~~-~~~~~l~~~~~ 252 (444)
..+..+...+++++|+ |+++.|++++.
T Consensus 264 ~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 264 ARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 5666666679999998 88777655443
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.35 E-value=2.3e-11 Score=110.19 Aligned_cols=254 Identities=9% Similarity=-0.042 Sum_probs=169.1
Q ss_pred eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe----------cCCcEEEEEcCCCCcccccccc-------CC
Q psy8152 66 KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV----------KSGDVKLWRYKTEPDQWTNFNV-------GP 128 (444)
Q Consensus 66 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~-------~~ 128 (444)
+|.++|..+++.+..+.... . +-..++|++++++++. .++.|.+||+.+++.+..+.-. ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-~-P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-L-SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-T-CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCC-C-CceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 88899999999999887533 3 3678899999988886 3688999999999988754322 13
Q ss_pred CeEEEEEeccCCEEEEeeC--CCeEEE--EEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEE
Q psy8152 129 QLECMKHNKHSNIIATGGK--ENDLKL--WDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVA 203 (444)
Q Consensus 129 ~v~~~~~~~~~~~l~~~~~--d~~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~ 203 (444)
....++++|++++|+++.. .+.|.+ +|+.+ +..+.. .. . +.+.|++ ..++
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~-------------------~--~~~~p~g~~~~~ 179 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-AS-------------------C--FHIHPGAAATHY 179 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SS-------------------C--CCCEEEETTEEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CC-------------------c--eEEccCCCeEEE
Confidence 4668999999999998864 467888 88876 333321 11 1 1223444 4555
Q ss_pred EEeCCceEEEEEcCCCC--CccceE----EEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCC--cceeEecc--
Q psy8152 204 VCSKQGYVRVYDPKITT--QRRPVL----KVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKG--KPCYKYKG-- 273 (444)
Q Consensus 204 ~~~~d~~i~i~d~~~~~--~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~-- 273 (444)
+.+.|+.+.+.++.... ..+.+. .+.....+. . .+++..++..+. +.+.+.|+.. . +.+..+.-
T Consensus 180 ~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~-~~~~v~~~~~~~~ 253 (368)
T 1mda_H 180 LGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPA-AGATMKAAIDGNE 253 (368)
T ss_dssp CCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCS-SCCEEECCCCSSC
T ss_pred EEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCC-CcceEEEEEEecc
Confidence 66778888888887100 022211 011122333 3 556666666556 9999999864 3 22222211
Q ss_pred -----c---cCceeEEEecCCCCEEEEEEC---------CCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchh
Q psy8152 274 -----F---AGCVKDIACPLNENLILSVSL---------DRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKK 336 (444)
Q Consensus 274 -----h---~~~i~~~~~s~~~~~l~s~~~---------dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 336 (444)
+ ......++|+|++++++.+.. .+.+.++|+.+++.+.++........++|+++
T Consensus 254 ~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~D--------- 324 (368)
T 1mda_H 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQD--------- 324 (368)
T ss_dssp THHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCS---------
T ss_pred ccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCC---------
Confidence 0 111222689999988776543 23567999999999999887778899998865
Q ss_pred hh-hccccc-cCCCccccCCCcccccc
Q psy8152 337 EE-QEHSEE-KGDSDEKYDPEHFEMNQ 361 (444)
Q Consensus 337 ~~-~~~s~~-~d~~i~~W~~~~~~~~~ 361 (444)
++ ++++.. .++.|.++|+.+.+...
T Consensus 325 g~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 325 GASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp SSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred CCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 34 455555 58999999999877554
No 234
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=7.1e-11 Score=117.72 Aligned_cols=234 Identities=11% Similarity=0.092 Sum_probs=144.6
Q ss_pred EEEEeCCCeEEEEe-----cCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCC-------------eEE
Q psy8152 91 VGVSRYDECILTAV-----KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKEN-------------DLK 152 (444)
Q Consensus 91 ~~~s~~~~~l~~~~-----~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~ 152 (444)
.++||+|++|+.+. ....|++||+.+++.+.. .........++|+ +++.|+.++.+. .|+
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~ 211 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVY 211 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEE
Confidence 35789999887543 235799999999986642 1111113578999 999999888774 399
Q ss_pred EEEcCCce----eeeeeec-ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC----CceEEEEEcCCCCCcc
Q psy8152 153 LWDLNTTK----NIFSAKN-VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK----QGYVRVYDPKITTQRR 223 (444)
Q Consensus 153 vwd~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~ 223 (444)
+|++.++. .+..... +.. ++.++.|+|++++|+.... ...|+++|+. .. ..
T Consensus 212 ~~~lgt~~~~~~~v~~~~~~~~~------------------~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~-~~-~~ 271 (693)
T 3iuj_A 212 FHRLGTAQEDDRLVFGAIPAQHH------------------RYVGATVTEDDRFLLISAANSTSGNRLYVKDLS-QE-NA 271 (693)
T ss_dssp EEETTSCGGGCEEEESCSGGGCC------------------SEEEEEECTTSCEEEEEEESSSSCCEEEEEETT-ST-TC
T ss_pred EEECCCCcccceEEEecCCCCCe------------------EEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC-CC-CC
Confidence 99988754 3333322 222 5778999999988764432 3589999997 11 12
Q ss_pred ceEEEeCCCCCeeEEEEccCCCEEE-EEcCC---CcEEEEEcCCCCcc--eeEeccccCceeEEEecCCCCEEEEEECCC
Q psy8152 224 PVLKVDIPDVALSCITTTNQSHYVI-VGSTT---GDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPLNENLILSVSLDR 297 (444)
Q Consensus 224 ~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d---g~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg 297 (444)
....+..+....... |++++..|+ ....+ +.|.++++.+ +.. ...+..|...+. .|++++++|+....++
T Consensus 272 ~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 272 PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN-PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS-CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET
T ss_pred ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC-CCccccEEEecCCCCEE--EEEEECCEEEEEEEEC
Confidence 344555565555554 666665554 44433 5799999987 544 355666666555 8889998777665543
Q ss_pred ---cEEEEEcCCCceEEEeecC--CceeEEEEcCCCcccccchhhhhccccc----cCCCccccCCCccccc
Q psy8152 298 ---HFRVHDFHSKKLLRKDYMQ--SRLTSILVRSDFSLENETKKEEQEHSEE----KGDSDEKYDPEHFEMN 360 (444)
Q Consensus 298 ---~i~vw~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~s~~----~d~~i~~W~~~~~~~~ 360 (444)
.|++|++..+. ...+... ..+..+.++ +++..++... .-+++..|++.+++..
T Consensus 348 g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~---------~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 348 ATARVEQFDYEGKR-VREVALPGLGSVSGFNGK---------HDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp TEEEEEEECTTSCE-EEEECCSSSSEEEECCCC---------TTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred CeeEEEEEECCCCe-eEEeecCCCceEEeeecC---------CCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 68899987544 3444322 223333222 2223333222 2267888887665443
No 235
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.35 E-value=1e-09 Score=106.13 Aligned_cols=294 Identities=16% Similarity=0.165 Sum_probs=181.0
Q ss_pred cccEEEecC-CCcEEEEEc-CCCccceeeeeeeccc-C-cc-----cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc
Q psy8152 6 DYNIYIGSS-TGAFKGVNL-SKDKCIIKNIQNVKYI-T-NK-----ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN 76 (444)
Q Consensus 6 ~~~l~~g~~-dg~i~i~~~-~~~~~~~~~~~~~~~~-~-h~-----~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~ 76 (444)
+..|++++. ++.|+.+|. .+++..-. ..+... . +. ..-..+++. +..|++++.++.|..+|..+|+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~ 136 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQ--HKPKQDASTKAVMCCDVVDRGLAYG---AGQIVKKQANGHLLALDAKTGK 136 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEE--ECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEE--EcCCCCccccccccccccccccEEE---CCEEEEEeCCCEEEEEECCCCC
Confidence 456777777 899999999 88874211 111100 0 00 000122333 6788888889999999999999
Q ss_pred cccceeeccccc--cEEE-EEeCCCeEEEEec------CCcEEEEEcCCCCccccccccCCC------------------
Q psy8152 77 FNTNTDVSFGEG--DIVG-VSRYDECILTAVK------SGDVKLWRYKTEPDQWTNFNVGPQ------------------ 129 (444)
Q Consensus 77 ~~~~~~~~~~~~--~v~~-~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~------------------ 129 (444)
.+..+....+.. .+.+ ....+..+++++. ++.|+.+|..+++.++.+......
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 887765433211 1110 0012445565654 789999999999887633221100
Q ss_pred --------------------eEEEEEeccCCEEEEeeCC----------------CeEEEEEcCCceeeeeeecccceee
Q psy8152 130 --------------------LECMKHNKHSNIIATGGKE----------------NDLKLWDLNTTKNIFSAKNVSHRVL 173 (444)
Q Consensus 130 --------------------v~~~~~~~~~~~l~~~~~d----------------~~i~vwd~~~~~~~~~~~~~~~~~~ 173 (444)
...+++.+....++.++.+ +.|..+|..+++.+..++...+
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~--- 293 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH--- 293 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT---
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCC---
Confidence 0235666755666665532 3699999999998887764322
Q ss_pred EeeeCCCcccccC-ccceeEEEEecCCC---EEEEEeCCceEEEEEcCCCCCccceEEEeCCC-------------CCe-
Q psy8152 174 VYSVKPDEFDLRR-PVWVNGISFLPNSD---KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-------------VAL- 235 (444)
Q Consensus 174 ~~~~~~~~~~~~~-~~~i~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-------------~~i- 235 (444)
+..+... ..++. +...++|+ .++.++.+|.++++|.. +++.+..+.... .++
T Consensus 294 ------d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~~w~~~~~~~~~w~~~~d~~~g~p~~ 363 (571)
T 2ad6_A 294 ------DEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRE---NGNLIVAEKVDPAVNVFKKVDLKTGTPVR 363 (571)
T ss_dssp ------CSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETT---TCCEEEEEESSTTCCSEEEECTTTCSEEE
T ss_pred ------cccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECC---CCCEEeeecccCCccccccccccCCceec
Confidence 0000000 01121 22334673 57788899999999988 555555543221 111
Q ss_pred -------------------------eEEEEccCCCEEEEEc-------------------------------------CC
Q psy8152 236 -------------------------SCITTTNQSHYVIVGS-------------------------------------TT 253 (444)
Q Consensus 236 -------------------------~~~~~~~~~~~l~~~~-------------------------------------~d 253 (444)
..++++|+..+|++.. .+
T Consensus 364 ~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 443 (571)
T 2ad6_A 364 DPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEM 443 (571)
T ss_dssp CGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCC
T ss_pred ccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCC
Confidence 2467888877776643 35
Q ss_pred CcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCCce
Q psy8152 254 GDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQSRL 319 (444)
Q Consensus 254 g~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~~i 319 (444)
|.|+.||+.+ ++.+.++... ..+....+...+.+++.++.|+.|++||..+++++.++.....+
T Consensus 444 g~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 507 (571)
T 2ad6_A 444 GQIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG 507 (571)
T ss_dssp EEEEEECTTT-CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred CeEEEEECCC-CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCc
Confidence 7899999999 9988887632 23333333334667888999999999999999999888755443
No 236
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.34 E-value=3.2e-10 Score=101.16 Aligned_cols=210 Identities=10% Similarity=-0.002 Sum_probs=138.4
Q ss_pred EEEEeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152 91 VGVSRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS 169 (444)
Q Consensus 91 ~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 169 (444)
..++++++ ++++...++.|..|+. +++.. .+..+...+..++++++++++++....+.|.+|+.. ++.........
T Consensus 50 p~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~-~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~ 126 (305)
T 3dr2_A 50 PAWWEAQRTLVWSDLVGRRVLGWRE-DGTVD-VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYA 126 (305)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEET-TSCEE-EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEET
T ss_pred CeEeCCCCEEEEEECCCCEEEEEeC-CCCEE-EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccC
Confidence 44578888 5677777899999997 45433 345566778999999999877766666889999986 44322111111
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEecCCCEEEE----EeC-------------CceEEEEEcCCCCCccceEEEeCCC
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV----CSK-------------QGYVRVYDPKITTQRRPVLKVDIPD 232 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~ 232 (444)
. .....++.+++.|+|+++++ |.. .+.|..|+.. ...... +. ..
T Consensus 127 ~--------------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~---~g~~~~-~~-~~ 187 (305)
T 3dr2_A 127 G--------------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD---GSPLQR-MA-DL 187 (305)
T ss_dssp T--------------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS---SCCCEE-EE-EE
T ss_pred C--------------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC---CCcEEE-Ee-cC
Confidence 1 00113678999999998886 332 2567777765 232222 22 33
Q ss_pred CCeeEEEEccCCCEEEEEcCC------CcEEEEEcCCCCcceeE---ec-cccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152 233 VALSCITTTNQSHYVIVGSTT------GDMMAVDLRGKGKPCYK---YK-GFAGCVKDIACPLNENLILSVSLDRHFRVH 302 (444)
Q Consensus 233 ~~i~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~---~~-~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw 302 (444)
.....++|+|+++.|+++... +.|++|++.. .. +.. +. ...+....+++.++|++.++ +.+ .|.+|
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~-~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~ 263 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD-GA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVF 263 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET-TE-EEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEE
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC-CC-ccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEE
Confidence 446789999999988776554 6899999876 43 211 11 12344567899999995544 444 49999
Q ss_pred EcCCCceEEEeecCCceeEEEEcCC
Q psy8152 303 DFHSKKLLRKDYMQSRLTSILVRSD 327 (444)
Q Consensus 303 ~~~~~~~~~~~~~~~~i~~~~~~~~ 327 (444)
+. .++.+..+.....+.+++|.++
T Consensus 264 ~~-~g~~~~~~~~~~~~~~~~f~~d 287 (305)
T 3dr2_A 264 DS-DGQLLGHIPTPGTASNCTFDQA 287 (305)
T ss_dssp CT-TSCEEEEEECSSCCCEEEECTT
T ss_pred CC-CCCEEEEEECCCceeEEEEeCC
Confidence 98 5777777766667888888743
No 237
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.30 E-value=5.1e-09 Score=101.22 Aligned_cols=295 Identities=15% Similarity=0.123 Sum_probs=178.4
Q ss_pred cccEEEecC-CCcEEEEEc-CCCccceeeeeeecccCcc-------cceEEEeeeccCCcE----EEEEEcCCeEEEEeC
Q psy8152 6 DYNIYIGSS-TGAFKGVNL-SKDKCIIKNIQNVKYITNK-------ASVLALNWGNVEESE----LLIAYSGQKIKIYDT 72 (444)
Q Consensus 6 ~~~l~~g~~-dg~i~i~~~-~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~----l~~~~~d~~i~vw~~ 72 (444)
+..|++++. ++.|+.+|. .+++..-+. ........ .....++++ |.+.. |++++.++.|..+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~--~~~~~~~~~~~~~~~~~~~g~av~-p~~g~~~~rV~v~t~dg~l~AlDa 138 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQD--KPKQNPAARAVACCDLVNRGLAYW-PGDGKTPALILKTQLDGNVAALNA 138 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEE--CCCCCGGGGGGCSSCSCCCCCEEE-CCCSSSCCEEEEECTTSEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEE--CCCCCccccccccccccccceEEE-ecCCcceeEEEEEcCCCEEEEEEC
Confidence 456777877 899999999 888742111 11100000 011234553 23444 888989999999999
Q ss_pred CCCccccceeeccccc--cEEE-EEeCCCeEEEEe------cCCcEEEEEcCCCCccccccccCCC--------------
Q psy8152 73 DFKNFNTNTDVSFGEG--DIVG-VSRYDECILTAV------KSGDVKLWRYKTEPDQWTNFNVGPQ-------------- 129 (444)
Q Consensus 73 ~~~~~~~~~~~~~~~~--~v~~-~s~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~~-------------- 129 (444)
.+|+.+.......+.. .+.+ -...+..+++++ .++.|+.+|..+++.++.+......
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 139 ETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp TTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 9999887765432111 1110 001234555554 3789999999999987633321110
Q ss_pred -----------------------e-EEEEEeccCCEEEEeeCC----------------CeEEEEEcCCceeeeeeeccc
Q psy8152 130 -----------------------L-ECMKHNKHSNIIATGGKE----------------NDLKLWDLNTTKNIFSAKNVS 169 (444)
Q Consensus 130 -----------------------v-~~~~~~~~~~~l~~~~~d----------------~~i~vwd~~~~~~~~~~~~~~ 169 (444)
+ ..+++.+...+++.++.+ +.|..+|..+++.+..++...
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 1 134666766777777654 389999999999988776544
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEe-cCC---CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-------------
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFL-PNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD------------- 232 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------------- 232 (444)
+ +..+........-+... .+| ..++.++.+|.++++|.. +++.+.......
T Consensus 299 ~---------d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~lw~~~~~~~~~~~~~~~~~~g 366 (599)
T 1w6s_A 299 H---------DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRT---DGALVSANKLDDTVNVFKSVDLKTG 366 (599)
T ss_dssp T---------CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETT---TCCEEEEEESSTTCCSEEEECTTTC
T ss_pred C---------ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECC---CCCEeecccccCCcccccccccCCC
Confidence 3 10000000011112222 456 467778899999999988 565555443211
Q ss_pred CC--------------------------eeEEEEccCCCEEEEE---------------------------------c--
Q psy8152 233 VA--------------------------LSCITTTNQSHYVIVG---------------------------------S-- 251 (444)
Q Consensus 233 ~~--------------------------i~~~~~~~~~~~l~~~---------------------------------~-- 251 (444)
.+ -..++++|+..++++. +
T Consensus 367 ~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~ 446 (599)
T 1w6s_A 367 QPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDR 446 (599)
T ss_dssp CEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBT
T ss_pred ceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCc
Confidence 11 1245677766555442 1
Q ss_pred ----CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecCC
Q psy8152 252 ----TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQS 317 (444)
Q Consensus 252 ----~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~~ 317 (444)
..|.|..||+.+ ++.+.+.+. ..++..-.+...+.+++.++.|+.|+.||..+|+++.++....
T Consensus 447 ~~~~~~G~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~ 514 (599)
T 1w6s_A 447 QNYEGLGQIKAYNAIT-GDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS 514 (599)
T ss_dssp TTTBCCEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ccCCCcCeEEEEECCC-CCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence 347899999999 888887752 2222211122346678889999999999999999999876543
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.30 E-value=4.2e-10 Score=101.45 Aligned_cols=254 Identities=14% Similarity=0.080 Sum_probs=161.0
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF 85 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~ 85 (444)
+..|++++.+ |..++. +++. . .... .+........+. +..|++++.++.|..++.. ++....+...
T Consensus 70 ~g~l~v~t~~--l~~~d~-~g~~-~---~~~~--~~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~- 135 (330)
T 3hxj_A 70 DGTIYFGSDK--VYAINP-DGTE-K---WRFD--TKKAIVSDFTIF---EDILYVTSMDGHLYAINTD-GTEKWRFKTK- 135 (330)
T ss_dssp TTEECCSSCE--EEEECC-CGGG-G---GGSC--C-----CCEEEE---TTEEEEECTTSEEEEECTT-SCEEEEEECS-
T ss_pred CCcEEEecCc--EEEECC-CCcE-E---EEEE--CCCCcccCceEE---CCEEEEEecCCEEEEEcCC-CCEEEEEcCC-
Confidence 4567777665 777775 3332 1 1111 111122223333 5678888888999999988 7765554422
Q ss_pred ccccEEE--EEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeee
Q psy8152 86 GEGDIVG--VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIF 163 (444)
Q Consensus 86 ~~~~v~~--~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 163 (444)
...+.+ +.+++ .|+.++.++.|..++.. ++...........+.++.+.+++.+++. + +.|..+| .+++.+.
T Consensus 136 -~~~~~~~~~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~ 208 (330)
T 3hxj_A 136 -KAIYATPIVSEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKW 208 (330)
T ss_dssp -SCCCSCCEECTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEE
T ss_pred -CceeeeeEEcCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEE
Confidence 222222 23344 46668888999999988 7766544444556777777777765544 4 7899999 6777666
Q ss_pred eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC
Q psy8152 164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ 243 (444)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 243 (444)
....... .+.++...+++. |.+++.++.|..++.. ...+..+......+..+.+.++
T Consensus 209 ~~~~~~~------------------~~~~~~~~~~g~-l~v~t~~~gl~~~~~~----g~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3hxj_A 209 NFYAGYW------------------TVTRPAISEDGT-IYVTSLDGHLYAINPD----GTEKWRFKTGKRIESSPVIGNT 265 (330)
T ss_dssp EECCSSC------------------CCSCCEECTTSC-EEEEETTTEEEEECTT----SCEEEEEECSSCCCSCCEECTT
T ss_pred EEccCCc------------------ceeceEECCCCe-EEEEcCCCeEEEECCC----CCEeEEeeCCCCccccceEcCC
Confidence 5543333 477788887765 4556677788888744 4455555555444556666656
Q ss_pred CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152 244 SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSK 307 (444)
Q Consensus 244 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 307 (444)
+ .|++++.+|.|..+|. + ++.+..+......+.++...+++. |..++.+|.+++......
T Consensus 266 g-~l~v~t~~ggl~~~d~-~-g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 266 D-TIYFGSYDGHLYAINP-D-GTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp S-CEEEECTTCEEEEECT-T-SCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred C-eEEEecCCCCEEEECC-C-CcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 6 5667888888999995 6 777777765555677777777776 556889999998876543
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.27 E-value=1.7e-09 Score=101.98 Aligned_cols=223 Identities=10% Similarity=-0.019 Sum_probs=148.3
Q ss_pred eCCCeEEEEec-CCcEEEEEcCCCCccccc-cccCCCeEEEEE-e-ccCCEEEEee------------------CCCeEE
Q psy8152 95 RYDECILTAVK-SGDVKLWRYKTEPDQWTN-FNVGPQLECMKH-N-KHSNIIATGG------------------KENDLK 152 (444)
Q Consensus 95 ~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~-~~~~~~v~~~~~-~-~~~~~l~~~~------------------~d~~i~ 152 (444)
++|++++++.. ++.|.+.|+.+.++...+ ......+..+++ . |++.++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 47888777655 556999999999877522 233456888898 4 8999998884 346799
Q ss_pred EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-----------------------
Q psy8152 153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG----------------------- 209 (444)
Q Consensus 153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----------------------- 209 (444)
++|..+.+.+.++.-... ...++++|+|+++++.+.+.
T Consensus 179 vID~~t~~v~~qI~Vgg~-------------------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~ 239 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGN-------------------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA 239 (595)
T ss_dssp EEETTTTEEEEEEEESSC-------------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred EEECCCCeEEEEEEeCCC-------------------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence 999999888877764333 34466777777766665432
Q ss_pred ---------------eEEEEEcCCCCC--ccc-eEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCc----
Q psy8152 210 ---------------YVRVYDPKITTQ--RRP-VLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGK---- 266 (444)
Q Consensus 210 ---------------~i~i~d~~~~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~---- 266 (444)
.|.+.|.+ . ... +..+... ....++.++|+|++++++ ..+.+|.++|+.+ .+
T Consensus 240 ~~~~~v~~Gk~~~i~~V~VID~~---~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~-~~~~~~ 314 (595)
T 1fwx_A 240 EIEKAIAAGDYQELNGVKVVDGR---KEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR-FDAVFY 314 (595)
T ss_dssp HHHHHHHHTCSEEETTEEEEECS---GGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGG-HHHHHH
T ss_pred ceeEeccCCCeeEECcEEEEeCc---ccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcc-cccccc
Confidence 36777777 3 233 3444432 245789999999987764 4678999999986 42
Q ss_pred --------ceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC----------CceEEEeecCCceeEEEEcCCC
Q psy8152 267 --------PCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS----------KKLLRKDYMQSRLTSILVRSDF 328 (444)
Q Consensus 267 --------~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~----------~~~~~~~~~~~~i~~~~~~~~~ 328 (444)
.+..+. -......++|+|+|...++.-.+++|.+|++.. .+.+.++......-...++..
T Consensus 315 ~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g- 392 (595)
T 1fwx_A 315 ENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMG- 392 (595)
T ss_dssp SCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTT-
T ss_pred cccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccc-
Confidence 233333 234568899999995445566899999999987 456666654433322333221
Q ss_pred cccccchhhhhcccccc
Q psy8152 329 SLENETKKEEQEHSEEK 345 (444)
Q Consensus 329 ~~~~~~~~~~~~~s~~~ 345 (444)
....+++++|++...
T Consensus 393 --~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 393 --ETLDATNDWLVCLSK 407 (595)
T ss_dssp --TSTTCCSSEEEEEES
T ss_pred --eEeCCCCCEEEEcCC
Confidence 123477787776643
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.26 E-value=1.4e-09 Score=107.42 Aligned_cols=293 Identities=12% Similarity=0.089 Sum_probs=181.7
Q ss_pred CcEEEEEEcCCeEEEEeCCCCccccceeeccccc--------cE-EEEEeCCCeEEEEecCCcEEEEEcCCCCccccccc
Q psy8152 55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEG--------DI-VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFN 125 (444)
Q Consensus 55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~--------~v-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 125 (444)
+..|++++.++.|+.+|..+|+.+..+....... .+ ..+...+..+++++.++.|..+|..+++.++....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 5678888888999999999999887765321100 00 11223467788889999999999999998874433
Q ss_pred cC-CCeEEEEEec--cCCEEEEeeC------CCeEEEEEcCCceeeeeeecccce-eeEee-----eCCCcccc------
Q psy8152 126 VG-PQLECMKHNK--HSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHR-VLVYS-----VKPDEFDL------ 184 (444)
Q Consensus 126 ~~-~~v~~~~~~~--~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~------ 184 (444)
.. .....+...| .+..++++.. +|.|..+|..+++.+..+...... ..... ........
T Consensus 146 ~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~ 225 (668)
T 1kv9_A 146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL 225 (668)
T ss_dssp SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred CCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeee
Confidence 11 0001111112 2345555543 589999999999999887542110 00000 00000000
Q ss_pred -cCccceeEEEEecCCCEEEEEeCCce-------------------EEEEEcCCCCCccceEEEeC--CC-------CCe
Q psy8152 185 -RRPVWVNGISFLPNSDKVAVCSKQGY-------------------VRVYDPKITTQRRPVLKVDI--PD-------VAL 235 (444)
Q Consensus 185 -~~~~~i~~~~~~~~~~~l~~~~~d~~-------------------i~i~d~~~~~~~~~~~~~~~--~~-------~~i 235 (444)
........+++.|...+++.++.++. |..+|.. +++.+..++. |. .+.
T Consensus 226 ~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~---tG~~~W~~~~~~~~~wd~~~~~~~ 302 (668)
T 1kv9_A 226 GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPD---TGKLAWHYQVTPGDSWDFTATQQI 302 (668)
T ss_dssp CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT---TCCEEEEEESSTTCCSCCCCCSCE
T ss_pred CCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCC---CCceeeEeecCCCccccccCCCCc
Confidence 00001235788888888888887764 8999988 7777777664 22 222
Q ss_pred eEEEEccCCC---EEEEEcCCCcEEEEEcCCCCcceeEecccc------------Cce----------------------
Q psy8152 236 SCITTTNQSH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFA------------GCV---------------------- 278 (444)
Q Consensus 236 ~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~------------~~i---------------------- 278 (444)
....+..+|+ .|+.++.+|.++++|..+ ++++..++... .++
T Consensus 303 ~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 303 TLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred EEEEeccCCcEEEEEEEECCCCEEEEEECCC-CCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 2223334665 688899999999999999 98875433111 000
Q ss_pred --eEEEecCCCCEEEEEE------------------------------------CCCcEEEEEcCCCceEEEeecCCcee
Q psy8152 279 --KDIACPLNENLILSVS------------------------------------LDRHFRVHDFHSKKLLRKDYMQSRLT 320 (444)
Q Consensus 279 --~~~~~s~~~~~l~s~~------------------------------------~dg~i~vw~~~~~~~~~~~~~~~~i~ 320 (444)
..++++|+..+++... .+|.|+.||+.+++.+.+.....+..
T Consensus 382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 461 (668)
T 1kv9_A 382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWN 461 (668)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCc
Confidence 1257777766655421 23789999999999988876554443
Q ss_pred EEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152 321 SILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
...+. ..+.++..++.++.++.|+...++..
T Consensus 462 ~~~~~---------t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 462 GGTLS---------TAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCEEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CceeE---------eCCCEEEEECCcccchhhhhhcChhh
Confidence 22222 22356777889999999999877654
No 241
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.24 E-value=1.5e-08 Score=98.08 Aligned_cols=294 Identities=13% Similarity=0.116 Sum_probs=176.6
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccc------eEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKAS------VLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNT 79 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~------v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~ 79 (444)
+..|++++..+.|+.+|..+++..-+ +. ... ..... -..+++. +..|++++.++.|..+|..+|+.+.
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~-~~-~~~-~~~~~~~~~~~~~g~a~~---~~~v~~~t~dg~l~AlD~~TG~~~W 141 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWT-YN-HRL-PDDIRPCCDVVNRGAAIY---GDKVFFGTLDASVVALNKNTGKVVW 141 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEE-EE-CCC-CTTCCCSSCSCCCCCEEE---TTEEEEEETTTEEEEEESSSCCEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEE-Ec-CCC-CcccccccccCCCccEEE---CCEEEEEeCCCEEEEEECCCCCEEe
Confidence 35567776644588899988875211 11 110 00000 0122333 5678888999999999999999987
Q ss_pred ceeecccc-------ccEEEEE-eCCC-eEEEEe------cCCcEEEEEcCCCCccccccccCC----------------
Q psy8152 80 NTDVSFGE-------GDIVGVS-RYDE-CILTAV------KSGDVKLWRYKTEPDQWTNFNVGP---------------- 128 (444)
Q Consensus 80 ~~~~~~~~-------~~v~~~s-~~~~-~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~---------------- 128 (444)
.+....+. .++..=. .+++ .+++++ .++.|+.+|..+++.++.......
T Consensus 142 ~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~ 221 (582)
T 1flg_A 142 KKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDV 221 (582)
T ss_dssp EEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCT
T ss_pred eecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccc
Confidence 76543321 1221100 1133 565554 378999999999988763221100
Q ss_pred -------------------------CeEEEEEeccCCEEEEeeC--------------------C----CeEEEEEcCCc
Q psy8152 129 -------------------------QLECMKHNKHSNIIATGGK--------------------E----NDLKLWDLNTT 159 (444)
Q Consensus 129 -------------------------~v~~~~~~~~~~~l~~~~~--------------------d----~~i~vwd~~~~ 159 (444)
.-..+++.|...+++.+.. | +.|..+|..++
T Consensus 222 g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG 301 (582)
T 1flg_A 222 KAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSG 301 (582)
T ss_dssp TCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTC
T ss_pred ccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCC
Confidence 0013466676667776653 2 58999999999
Q ss_pred eeeeeeecccceeeEeeeCCCcccccC-ccceeEEEEe-cCCC---EEEEEeCCceEEEEEcCCCCCccceEEEeCCC--
Q psy8152 160 KNIFSAKNVSHRVLVYSVKPDEFDLRR-PVWVNGISFL-PNSD---KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-- 232 (444)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~-~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-- 232 (444)
+.+..++...+ +..+... ..++. +... .+|+ .++.++.+|.++++|.. +++.+..+....
T Consensus 302 ~~~W~~q~~~~---------d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~lw~~~~~~~~ 368 (582)
T 1flg_A 302 EVKWFYQHTPN---------DAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRS---NGKLQNAFPFVDNI 368 (582)
T ss_dssp CEEEEEESSTT---------CCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETT---TCCEEEEEESSSCC
T ss_pred CEEEEEeCCCC---------CcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECC---CCCEecccccccCc
Confidence 99887764322 0000000 00111 1222 4563 77889999999999988 555555443221
Q ss_pred -----------CC--------------------------------eeEEEEccCCCEEEEEc------------------
Q psy8152 233 -----------VA--------------------------------LSCITTTNQSHYVIVGS------------------ 251 (444)
Q Consensus 233 -----------~~--------------------------------i~~~~~~~~~~~l~~~~------------------ 251 (444)
.+ -..++++|...++++..
T Consensus 369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCC
Confidence 00 01356676655554432
Q ss_pred ---------------CCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC
Q psy8152 252 ---------------TTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ 316 (444)
Q Consensus 252 ---------------~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~ 316 (444)
..|.|+.||+.+ ++.+.++..+ .++..-.....+.+++.++.|+.|+.||..+|+.+.++...
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~t-G~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTT-CCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ceeccceeecCCCCCCcceEEEEECCC-CCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence 357899999999 9988877632 22222122224667888999999999999999999988765
Q ss_pred Ccee
Q psy8152 317 SRLT 320 (444)
Q Consensus 317 ~~i~ 320 (444)
..+.
T Consensus 527 ~g~~ 530 (582)
T 1flg_A 527 SGIV 530 (582)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 5443
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.23 E-value=5.8e-08 Score=84.55 Aligned_cols=245 Identities=9% Similarity=-0.063 Sum_probs=146.2
Q ss_pred cEEEEEEcCCeEEEEeCCCCcccc-----ceeeccccccEEEEEeCCCeEEE-EecCCcEEEEEcCCCCccccccccCCC
Q psy8152 56 SELLIAYSGQKIKIYDTDFKNFNT-----NTDVSFGEGDIVGVSRYDECILT-AVKSGDVKLWRYKTEPDQWTNFNVGPQ 129 (444)
Q Consensus 56 ~~l~~~~~d~~i~vw~~~~~~~~~-----~~~~~~~~~~v~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~~~ 129 (444)
.+|+.+.. +.|+.+++....... .+..+.....-.++.++++.|+. -...+.|.++++...............
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 45555554 478888887544321 11111111223445665555554 445789999998766543222222356
Q ss_pred eEEEEEeccCCE-EEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-
Q psy8152 130 LECMKHNKHSNI-IATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK- 207 (444)
Q Consensus 130 v~~~~~~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 207 (444)
...+++.+++.. +++....+.|.++++.............. ....++++|++..|..+..
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~------------------~P~~i~vd~~~g~lyv~~~~ 142 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLV------------------NPRGIVTDPVRGNLYWTDWN 142 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS------------------SEEEEEEETTTTEEEEEECC
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCC------------------CccEEEEeeCCCEEEEEECC
Confidence 789999996544 44555578899999864322111111111 4688999997655554443
Q ss_pred --CceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEE-EEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152 208 --QGYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYV-IVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC 283 (444)
Q Consensus 208 --d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~ 283 (444)
.+.|..+++. . . ....+ .........++++|++..| ++-...+.|.++++.. ......+.+ ......++.
T Consensus 143 ~~~~~I~~~~~d-g-~--~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P~gi~~ 216 (267)
T 1npe_A 143 RDNPKIETSHMD-G-T--NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYPFAVTS 216 (267)
T ss_dssp SSSCEEEEEETT-S-C--CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSEEEEEE
T ss_pred CCCcEEEEEecC-C-C--CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCceEEEE
Confidence 4688888887 1 1 11222 2233457889999986655 4555668899999875 443333332 223456665
Q ss_pred cCCCCEEEEEE-CCCcEEEEEcCCCceEEEeecCC--ceeEEEEcCC
Q psy8152 284 PLNENLILSVS-LDRHFRVHDFHSKKLLRKDYMQS--RLTSILVRSD 327 (444)
Q Consensus 284 s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~~~~~~--~i~~~~~~~~ 327 (444)
. +..|+.+. ..+.|.+++..+++.+..+.... ....+++.++
T Consensus 217 d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 217 Y--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp E--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred e--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 4 44454444 56899999999999888876432 4677777765
No 243
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.21 E-value=1.6e-08 Score=92.07 Aligned_cols=237 Identities=12% Similarity=0.067 Sum_probs=148.0
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeec---cc-C-cccceEEEeeeccCCcEEEEEEcC------CeEEEEeCC
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK---YI-T-NKASVLALNWGNVEESELLIAYSG------QKIKIYDTD 73 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~---~~-~-h~~~v~~~~~~~~~~~~l~~~~~d------~~i~vw~~~ 73 (444)
....++.|..++.|+++|+.+.....+....+. .. . -......+..+ |++ .++++..+ +.|.++|..
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~-pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCG-PDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEEC-SSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeEC-CCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 445666777889999999975532222223231 00 0 11244566777 677 76666555 789999999
Q ss_pred CCccccceeeccccc-cE--EEEEeCCCeEEEEe-------------------cCCcEEEEEcCCCCcccccccc--CCC
Q psy8152 74 FKNFNTNTDVSFGEG-DI--VGVSRYDECILTAV-------------------KSGDVKLWRYKTEPDQWTNFNV--GPQ 129 (444)
Q Consensus 74 ~~~~~~~~~~~~~~~-~v--~~~s~~~~~l~~~~-------------------~dg~i~iw~~~~~~~~~~~~~~--~~~ 129 (444)
+.+.+..+....... .- ..++|+++.+++.. ...+|.+||+.+++.+..+.-- ...
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 999988876432221 12 34589999888874 3689999999987665432221 123
Q ss_pred eEEEEE--eccCCEEEEee------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCccccc----------Ccccee
Q psy8152 130 LECMKH--NKHSNIIATGG------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLR----------RPVWVN 191 (444)
Q Consensus 130 v~~~~~--~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~ 191 (444)
...+.| +|+++++++++ .+++|.+|....+.... .+ .+.+.+...... ....+.
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~-------vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EK-------VIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE-EE-------EEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE-EE-------EEeCCCccccccccccccccccCCCcee
Confidence 455656 99999888877 46688887765533110 00 011110000000 012478
Q ss_pred EEEEecCCCEEEEEeC-CceEEEEEcCCCCCccceEEEeCCC--------------CCeeEEEEccCCCEEEEEc
Q psy8152 192 GISFLPNSDKVAVCSK-QGYVRVYDPKITTQRRPVLKVDIPD--------------VALSCITTTNQSHYVIVGS 251 (444)
Q Consensus 192 ~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~~~ 251 (444)
.|.++|++++|.++.. .+.|.+||+......+.+..+.... ..-..++++|+|++|+++.
T Consensus 325 ~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8999999988876654 7899999986233445555554321 1257899999999999886
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.20 E-value=6.6e-08 Score=84.19 Aligned_cols=251 Identities=11% Similarity=0.062 Sum_probs=148.2
Q ss_pred cEEEecCCCcEEEEEcCCCccceee-eeeecccCcccceEEEeeeccCCcEEEE-EEcCCeEEEEeCCCCccccceeecc
Q psy8152 8 NIYIGSSTGAFKGVNLSKDKCIIKN-IQNVKYITNKASVLALNWGNVEESELLI-AYSGQKIKIYDTDFKNFNTNTDVSF 85 (444)
Q Consensus 8 ~l~~g~~dg~i~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~~-~~~d~~i~vw~~~~~~~~~~~~~~~ 85 (444)
+|+.+. .+.|+.+++......... ...+. .....+.+++|+ +.+..|+. -...+.|.++++.+......+....
T Consensus 3 ~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~--~~~~~~~gi~~d-~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 3 HLLFAQ-TGKIERLPLERNTMKKTEAKAFLH--IPAKVIIGLAFD-CVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEE-EEEEEEEEESSSCBCGGGCEEEEE--EEEEEEEEEEEE-TTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred EEEEEc-CCeEEEEEecCcccccccceeeec--CCCCcEEEEEEe-cCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 445544 357888888765421000 01111 113457899999 55555554 4456899999987654432221111
Q ss_pred ccccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccc-cCCCeEEEEEeccCCEEEEeeC---CCeEEEEEcCCce
Q psy8152 86 GEGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFN-VGPQLECMKHNKHSNIIATGGK---ENDLKLWDLNTTK 160 (444)
Q Consensus 86 ~~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~~~~ 160 (444)
....-.++.+++..|+ +-...+.|.++++...... .+.. .......++++|++..|+.+.. .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 1223345567655554 4455678999998754332 2222 2246789999996555555443 3688888876422
Q ss_pred eeeeee-cccceeeEeeeCCCcccccCccceeEEEEecCCCEE-EEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152 161 NIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV-AVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI 238 (444)
Q Consensus 161 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~ 238 (444)
...+. ... .....++++|++..| ++-...+.|.++++. .......+... .....+
T Consensus 158 -~~~~~~~~~------------------~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~---g~~~~~~~~~~-~~P~gi 214 (267)
T 1npe_A 158 -RRILAQDNL------------------GLPNGLTFDAFSSQLCWVDAGTHRAECLNPA---QPGRRKVLEGL-QYPFAV 214 (267)
T ss_dssp -CEEEECTTC------------------SCEEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEEEEECC-CSEEEE
T ss_pred -cEEEEECCC------------------CCCcEEEEcCCCCEEEEEECCCCEEEEEecC---CCceEEEecCC-CCceEE
Confidence 11111 111 147889999987655 455567899999988 33222223322 234567
Q ss_pred EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-CceeEEEecCCCC
Q psy8152 239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-GCVKDIACPLNEN 288 (444)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-~~i~~~~~s~~~~ 288 (444)
+.. .+.++++....+.|.+++..+ ++.+.++.... .....+++.|++.
T Consensus 215 ~~d-~~~lyva~~~~~~v~~~d~~~-g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 215 TSY-GKNLYYTDWKTNSVIAMDLAI-SKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEE-TTEEEEEETTTTEEEEEETTT-TEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEe-CCEEEEEECCCCeEEEEeCCC-CCceEEEccccccccceeeecCccC
Confidence 664 444555555678999999998 88888886432 2467888888764
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.18 E-value=5.4e-09 Score=101.14 Aligned_cols=290 Identities=9% Similarity=-0.043 Sum_probs=176.5
Q ss_pred CcEEEEEEc-CCeEEEEeC-CCCccccceeeccccc--------c-EEEEEeCCCeEEEEecCCcEEEEEcCCCCccccc
Q psy8152 55 ESELLIAYS-GQKIKIYDT-DFKNFNTNTDVSFGEG--------D-IVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTN 123 (444)
Q Consensus 55 ~~~l~~~~~-d~~i~vw~~-~~~~~~~~~~~~~~~~--------~-v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 123 (444)
+..|++++. ++.|+.+|. .+|+.+..+....... . ...+...+..+++++.++.|..+|..+++.++..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 456777777 889999999 8999887765432110 0 0112335678888889999999999999988743
Q ss_pred cccC----CCeEE-EEEeccCCEEEEeeC------CCeEEEEEcCCceeeeeeecccceeeEeeeCCC------------
Q psy8152 124 FNVG----PQLEC-MKHNKHSNIIATGGK------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD------------ 180 (444)
Q Consensus 124 ~~~~----~~v~~-~~~~~~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~------------ 180 (444)
.... ..+.+ ... .+..+++++. ++.|..+|..+++.+.++........ ....|.
T Consensus 142 ~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~-~~~~p~~~~~~~~~G~~~ 218 (571)
T 2ad6_A 142 EVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDS-VRLAKDFNSANPHYGQFG 218 (571)
T ss_dssp ECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHH-HTBCTTTTTTCGGGCCSS
T ss_pred cCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccc-cccCcccccccccccccc
Confidence 2211 12221 111 2345555554 79999999999999887764332100 000000
Q ss_pred ---------cccccCccceeEEEEecCCCEEEEEeCC----------------ceEEEEEcCCCCCccceEEEeCCC--C
Q psy8152 181 ---------EFDLRRPVWVNGISFLPNSDKVAVCSKQ----------------GYVRVYDPKITTQRRPVLKVDIPD--V 233 (444)
Q Consensus 181 ---------~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~~~~~--~ 233 (444)
.....-......+++.+....++.++.+ +.|..+|.. +++.+..++... .
T Consensus 219 ~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~---tG~~~W~~~~~~~d~ 295 (571)
T 2ad6_A 219 LGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLD---TGMAKWGYQKTPHDE 295 (571)
T ss_dssp HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETT---TCCEEEEEESSTTCS
T ss_pred cccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecC---CCcEEEEecCCCCcc
Confidence 0000000001235667766666666532 368999998 677777665321 1
Q ss_pred ----CeeE---EEEccCCC---EEEEEcCCCcEEEEEcCCCCcceeEecccc-------------Cce------------
Q psy8152 234 ----ALSC---ITTTNQSH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------------GCV------------ 278 (444)
Q Consensus 234 ----~i~~---~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------------~~i------------ 278 (444)
.+.. +...++|+ .++.++.+|.++++|..+ ++++..+.-.. .++
T Consensus 296 ~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~ 374 (571)
T 2ad6_A 296 WDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNREN-GNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHK 374 (571)
T ss_dssp SCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTT-CCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCC
T ss_pred cccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCC-CCEEeeecccCCccccccccccCCceecccccCCCCCCC
Confidence 1111 22224674 677899999999999999 98887664211 111
Q ss_pred --------------eEEEecCCCCEEEEEE-------------------------------------CCCcEEEEEcCCC
Q psy8152 279 --------------KDIACPLNENLILSVS-------------------------------------LDRHFRVHDFHSK 307 (444)
Q Consensus 279 --------------~~~~~s~~~~~l~s~~-------------------------------------~dg~i~vw~~~~~ 307 (444)
..++++|+..+|+..+ .+|.|..||+.++
T Consensus 375 ~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG 454 (571)
T 2ad6_A 375 GTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTG 454 (571)
T ss_dssp EEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTC
T ss_pred ceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCC
Confidence 2357888777776653 3478999999999
Q ss_pred ceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152 308 KLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 308 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
+.+.+..+...+.+..+. ..+..+..++.|+.++.||..+++..
T Consensus 455 ~~~W~~~~~~~~~~~~~~---------t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 455 KAKWTKWEKFAAWGGTLY---------TKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CEEEEEEESSCCCSBCEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CEEEEecCCCCccceeEE---------ECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 988877655443222111 11245566788999999999887765
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.15 E-value=2.8e-09 Score=100.54 Aligned_cols=234 Identities=10% Similarity=-0.004 Sum_probs=156.7
Q ss_pred CcccEEEec-CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeec-cCCcEEEEEE------------------cC
Q psy8152 5 DDYNIYIGS-STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGN-VEESELLIAY------------------SG 64 (444)
Q Consensus 5 ~~~~l~~g~-~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~~~~------------------~d 64 (444)
++.++++.. .++.|.+.++.+.++. +.+ .+.....+..+++.. |++.++++++ .+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~----~ii-~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCD----AIL-EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEE----EEE-ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEe----eEE-eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 445566654 4667999999988741 211 122344577888854 6899998885 24
Q ss_pred CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC-------------------------------------
Q psy8152 65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG------------------------------------- 107 (444)
Q Consensus 65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg------------------------------------- 107 (444)
+.+.++|..+.+....+...+ ...-..++|+|+++++++.+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 689999999988888877644 555677889999988887553
Q ss_pred -cEEEEEcCC--CCccccccccCCCeEEEEEeccCCEEEEee-CCCeEEEEEcCCce------------eeeeeecccce
Q psy8152 108 -DVKLWRYKT--EPDQWTNFNVGPQLECMKHNKHSNIIATGG-KENDLKLWDLNTTK------------NIFSAKNVSHR 171 (444)
Q Consensus 108 -~i~iw~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~------------~~~~~~~~~~~ 171 (444)
.|.|.|..+ ++.......-.....++.++|+|+++++++ .+.+|.++|+.+.+ .+......
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG--- 330 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG--- 330 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---
Confidence 366666665 333111333344667899999999777665 57899999999653 12222111
Q ss_pred eeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCC-------CCccceEEEeCCCCCe-----eEEE
Q psy8152 172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKIT-------TQRRPVLKVDIPDVAL-----SCIT 239 (444)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~~~~i-----~~~~ 239 (444)
.....++|+|+|...++...+++|.+|++... .....+.++..|-.+- ..+.
T Consensus 331 ----------------~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t 394 (595)
T 1fwx_A 331 ----------------LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGET 394 (595)
T ss_dssp ----------------SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTS
T ss_pred ----------------CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceE
Confidence 24889999999955556778999999999810 1145666676664432 2234
Q ss_pred EccCCCEEEEEcC---CCc----------EEEEEcCC
Q psy8152 240 TTNQSHYVIVGST---TGD----------MMAVDLRG 263 (444)
Q Consensus 240 ~~~~~~~l~~~~~---dg~----------i~iwd~~~ 263 (444)
++|+|++|+++.. |+. -.++|+..
T Consensus 395 ~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 395 LDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp TTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred eCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 5899999998543 432 17888854
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.14 E-value=2.6e-08 Score=85.24 Aligned_cols=208 Identities=11% Similarity=0.033 Sum_probs=141.5
Q ss_pred eeecccCcccc--eEEEeeeccCCcEEEEEE-c--CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe-cCC
Q psy8152 34 QNVKYITNKAS--VLALNWGNVEESELLIAY-S--GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV-KSG 107 (444)
Q Consensus 34 ~~~~~~~h~~~--v~~~~~~~~~~~~l~~~~-~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~-~dg 107 (444)
+.+..+.|... ...+.|+ +++ .|+.++ . ++.|+++|+.+++.+..+.... ......+.++++.|+.+. .++
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~-~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-~~fgeGi~~~g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYA-END-TLFESTGLYGRSSVRQVALQTGKVENIHKMDD-SYFGEGLTLLNEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEECCTTCCEEEEEEC-STT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEETTCS
T ss_pred eEEEEEECCCCCCcccEEEe-CCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCC-CcceEEEEEeCCEEEEEEecCC
Confidence 34444455543 5799999 665 555443 3 5899999999999998876533 233345666666655544 578
Q ss_pred cEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCc
Q psy8152 108 DVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRP 187 (444)
Q Consensus 108 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (444)
.+.++|..+.+.+..+. .. .-....++++++.|+++..++.|.++|..+.+.+..+...... ..-
T Consensus 87 ~v~viD~~t~~v~~~i~-~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~-------------~p~ 151 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFT-HQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG-------------HRV 151 (266)
T ss_dssp EEEEEETTTTEEEEEEE-CC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT-------------EEC
T ss_pred EEEEEECCCCcEEEEEE-CC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC-------------ccc
Confidence 99999999988776432 22 1113445667777777777899999999998877666532210 000
Q ss_pred cceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC-------------CCCeeEEEEccCCC-EEEEEcCC
Q psy8152 188 VWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP-------------DVALSCITTTNQSH-YVIVGSTT 253 (444)
Q Consensus 188 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~-~l~~~~~d 253 (444)
..++.+.|. ++..++.....+.|.+.|.. +++.+..+... ......|+|+|+++ +++++...
T Consensus 152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~---tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 152 IRLNELEYI-NGEVWANIWQTDCIARISAK---DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEEETT---TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccceeEEEE-CCEEEEecCCCCeEEEEECC---CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 126678888 66666666568899999999 67777766532 12458999999975 55567788
Q ss_pred CcEEEEEcCC
Q psy8152 254 GDMMAVDLRG 263 (444)
Q Consensus 254 g~i~iwd~~~ 263 (444)
+.|++.++..
T Consensus 228 ~~v~~i~l~~ 237 (266)
T 2iwa_A 228 PKLFEIKLHL 237 (266)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEec
Confidence 8999998876
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.11 E-value=2.5e-08 Score=96.39 Aligned_cols=289 Identities=10% Similarity=0.020 Sum_probs=174.3
Q ss_pred CcEEEEEEc-CCeEEEEeC-CCCccccceeecccc-----------ccEEEEEeCCCe----EEEEecCCcEEEEEcCCC
Q psy8152 55 ESELLIAYS-GQKIKIYDT-DFKNFNTNTDVSFGE-----------GDIVGVSRYDEC----ILTAVKSGDVKLWRYKTE 117 (444)
Q Consensus 55 ~~~l~~~~~-d~~i~vw~~-~~~~~~~~~~~~~~~-----------~~v~~~s~~~~~----l~~~~~dg~i~iw~~~~~ 117 (444)
+..|++++. ++.|+-+|. .+|+.+..+...... ..-.+++|.+.. |++++.++.|..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456777777 889999999 899988776543211 011233335555 888889999999999999
Q ss_pred CccccccccC----CCeEE-EEEeccCCEEEEee------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCC------
Q psy8152 118 PDQWTNFNVG----PQLEC-MKHNKHSNIIATGG------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPD------ 180 (444)
Q Consensus 118 ~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~------ 180 (444)
+.++...... ..+.+ ..+. + ..+++++ .++.|+.+|..+++.+.++........ ..+.|.
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~-~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-K-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKD-LLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-T-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHH-HTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEEE-C-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccc-cccccccccccc
Confidence 9887432211 12221 1111 3 4556555 379999999999999887764432100 000000
Q ss_pred ---------------cccccC-ccceeEEEEecCCCEEEEEeCC----------------ceEEEEEcCCCCCccceEEE
Q psy8152 181 ---------------EFDLRR-PVWVNGISFLPNSDKVAVCSKQ----------------GYVRVYDPKITTQRRPVLKV 228 (444)
Q Consensus 181 ---------------~~~~~~-~~~i~~~~~~~~~~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~ 228 (444)
.....- ..| ..+++.+...+++.++.+ +.|..+|.. +++.+..+
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W-~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~---TG~~~W~~ 294 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNW-GWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDAD---TGEAKFGY 294 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCC-SCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETT---TCCEEEEE
T ss_pred cccccccccccCCCcceecCCCccc-cceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCC---CCceeeEe
Confidence 000000 001 135666777777777665 378999998 67777766
Q ss_pred eCCCCC------e---eEEEEc-cCC---CEEEEEcCCCcEEEEEcCCCCcceeEecccc-------------Cce----
Q psy8152 229 DIPDVA------L---SCITTT-NQS---HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------------GCV---- 278 (444)
Q Consensus 229 ~~~~~~------i---~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------------~~i---- 278 (444)
+..... . .-+... .+| ..++.++.+|.++++|..+ ++++....-.. .++
T Consensus 295 q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~ 373 (599)
T 1w6s_A 295 QKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTD-GALVSANKLDDTVNVFKSVDLKTGQPVRDPE 373 (599)
T ss_dssp ESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTT-CCEEEEEESSTTCCSEEEECTTTCCEEECGG
T ss_pred ecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCC-CCEeecccccCCcccccccccCCCceeeccc
Confidence 543211 1 112222 467 5677899999999999999 98887654110 111
Q ss_pred ----------------------eEEEecCCCCEEEEEE---------------------------------------CCC
Q psy8152 279 ----------------------KDIACPLNENLILSVS---------------------------------------LDR 297 (444)
Q Consensus 279 ----------------------~~~~~s~~~~~l~s~~---------------------------------------~dg 297 (444)
..++++|+..++++.. ..|
T Consensus 374 ~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G 453 (599)
T 1w6s_A 374 YGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLG 453 (599)
T ss_dssp GCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCE
T ss_pred cCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcC
Confidence 1356677666554431 347
Q ss_pred cEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152 298 HFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 298 ~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
.|..||+.+++.+.+..+..+...-.+ ...+.++..++.|+.++.+|..+++.+
T Consensus 454 ~l~A~D~~tG~~~W~~~~~~~~~~g~~---------~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMERFAVWGGTM---------ATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp EEEEECTTTCCEEEEEEESSCCCSBCE---------EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred eEEEEECCCCCEEeEecCCCCccCcce---------EecCCEEEEECCCCeEEEEECCCCCEE
Confidence 888999999988877654432211100 012345666788999999998877654
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.09 E-value=7.5e-08 Score=81.35 Aligned_cols=199 Identities=12% Similarity=0.077 Sum_probs=133.5
Q ss_pred eeeeecccCcccce--EEEeeeccCCcEEEEEEcCC--eEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe-cC
Q psy8152 32 NIQNVKYITNKASV--LALNWGNVEESELLIAYSGQ--KIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV-KS 106 (444)
Q Consensus 32 ~~~~~~~~~h~~~v--~~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~-~d 106 (444)
.+..+....|...- ..+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.+.. ......+.+.++.|.... .+
T Consensus 30 ~~~vv~~~phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 30 DYQIVHSYPHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEEECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSS
T ss_pred ceEEEEEecCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeC
Confidence 34445555666544 788898 356666666665 89999999999998886532 333345666676665554 58
Q ss_pred CcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccC
Q psy8152 107 GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRR 186 (444)
Q Consensus 107 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (444)
+.+.+||..+.+.+..+.. .. ....+.+++..|+.+...+.|.++|..+.+.+.++...... ..
T Consensus 107 ~~v~v~D~~t~~~~~ti~~-~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g-------------~~ 170 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNY-DG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG-------------EE 170 (262)
T ss_dssp SEEEEEETTTCCEEEEEEC-SS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT-------------EE
T ss_pred CEEEEEECccCcEEEEEEC-CC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC-------------cc
Confidence 8999999999988864332 22 22333456777777766789999999998877766542210 00
Q ss_pred ccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------------CCCeeEEEEccCCCEEEEEcCC
Q psy8152 187 PVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------------DVALSCITTTNQSHYVIVGSTT 253 (444)
Q Consensus 187 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l~~~~~d 253 (444)
-..++.+.|. +|+.++..-....|.+.|.. +++.+..+... ....+.|+|+|+++.|++.+..
T Consensus 171 ~~~lNELe~~-~G~lyan~w~~~~I~vIDp~---tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 171 LPELNELEWV-DGEIFANVWQTNKIVRIDPE---TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp CCCEEEEEEE-TTEEEEEETTSSEEEEECTT---TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccceeEEE-CCEEEEEEccCCeEEEEECC---CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 0125567776 67666666678899999998 67666665532 2345899999987776665543
No 250
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.06 E-value=6.9e-08 Score=93.47 Aligned_cols=292 Identities=12% Similarity=0.053 Sum_probs=174.1
Q ss_pred CcEEEEEEcCCeEEEEeCCCCccccceeecccccc-------EEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccC
Q psy8152 55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGD-------IVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVG 127 (444)
Q Consensus 55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-------v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 127 (444)
+..|++++..+.|+.+|..+|+.+..+........ ...+...+..+++++.++.|..+|..+++.++......
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~ 147 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD 147 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence 45666666645599999999998877754321110 01122346778888899999999999999887433221
Q ss_pred ----CCeE-EEEEec---cCC-EEEEee------CCCeEEEEEcCCceeeeeeecccceee-----EeeeC-CCcc---c
Q psy8152 128 ----PQLE-CMKHNK---HSN-IIATGG------KENDLKLWDLNTTKNIFSAKNVSHRVL-----VYSVK-PDEF---D 183 (444)
Q Consensus 128 ----~~v~-~~~~~~---~~~-~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~---~ 183 (444)
..+. ...+.. +++ .+++++ .++.|+.+|..+++.+.........+. ..... ..+. .
T Consensus 148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~ 227 (582)
T 1flg_A 148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWP 227 (582)
T ss_dssp GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSC
T ss_pred CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCC
Confidence 0111 111111 122 566665 378999999999998886543211000 00000 0000 0
Q ss_pred ---------------ccCccceeEEEEecCCCEEEEEeC--------------------C----ceEEEEEcCCCCCccc
Q psy8152 184 ---------------LRRPVWVNGISFLPNSDKVAVCSK--------------------Q----GYVRVYDPKITTQRRP 224 (444)
Q Consensus 184 ---------------~~~~~~i~~~~~~~~~~~l~~~~~--------------------d----~~i~i~d~~~~~~~~~ 224 (444)
.....+ ..+++.|...+++.+.. | +.|..+|.. +++.
T Consensus 228 ~~~~~~~g~~~~~~~gGg~~w-~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~---TG~~ 303 (582)
T 1flg_A 228 DDRNSPTGKVESWSHGGGAPW-QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPS---SGEV 303 (582)
T ss_dssp BCTTSTTSBCGGGGGCBCCCC-SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTT---TCCE
T ss_pred CccccccccccccccCCcccc-CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCC---CCCE
Confidence 000111 24677777777776653 2 589999998 6777
Q ss_pred eEEEeC--CCC----CeeE-EEEc---cCCC---EEEEEcCCCcEEEEEcCCCCcceeEecccc-------------Cce
Q psy8152 225 VLKVDI--PDV----ALSC-ITTT---NQSH---YVIVGSTTGDMMAVDLRGKGKPCYKYKGFA-------------GCV 278 (444)
Q Consensus 225 ~~~~~~--~~~----~i~~-~~~~---~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~-------------~~i 278 (444)
+..++. |.. .+.. +.+. .+|+ .|+.++.+|.++++|..+ ++++..+.... .++
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~~~~~~~~~~~~~~~~g~p~ 382 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN-GKLQNAFPFVDNITWASHIDLKTGRPV 382 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT-CCEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC-CCEecccccccCccccccccccCCCEe
Confidence 777653 211 1111 2222 4663 788899999999999999 98887665321 000
Q ss_pred --------------------------------eEEEecCCCCEEEEEE--------------------------------
Q psy8152 279 --------------------------------KDIACPLNENLILSVS-------------------------------- 294 (444)
Q Consensus 279 --------------------------------~~~~~s~~~~~l~s~~-------------------------------- 294 (444)
..++++|+..++++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~ 462 (582)
T 1flg_A 383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD 462 (582)
T ss_dssp ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCS
T ss_pred EccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCC
Confidence 1346666655555432
Q ss_pred -CCCcEEEEEcCCCceEEEeecCCceeEEEEcCCCcccccchhhhhccccccCCCccccCCCccccc
Q psy8152 295 -LDRHFRVHDFHSKKLLRKDYMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFEMN 360 (444)
Q Consensus 295 -~dg~i~vw~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~~~ 360 (444)
..|.|+.||+.+++.+.+.....++..-.+. ..+.++..++.|+.++.||..+++.+
T Consensus 463 ~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~---------tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 463 DHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLA---------TAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp SCSEEEEEECTTTCCEEEEEEESSCCCSCCEE---------ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCcceEEEEECCCCCEEEEecCCCCCcccceE---------eCCCEEEEECCCCcEEEEECCCCCEE
Confidence 2578999999999988776654332211110 12356667889999999999887754
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.05 E-value=9.5e-08 Score=85.70 Aligned_cols=237 Identities=9% Similarity=-0.011 Sum_probs=144.4
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc------------------ccccEEEE--EeCCCeEEE
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF------------------GEGDIVGV--SRYDECILT 102 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~------------------~~~~v~~~--s~~~~~l~~ 102 (444)
....+++|. +++++++++..++.|..|+..++.... +.... ......++ .+++..|++
T Consensus 19 ~~p~~i~~d-~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFD-STNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECC-TTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEc-CCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 345778899 678878888888999999987654332 21100 01123444 442445555
Q ss_pred EecCCcEEEEEcCCCCccccccc-----cCCCeEEEEEec-cCCEEEEeeC-----------------CCeEEEEEcCCc
Q psy8152 103 AVKSGDVKLWRYKTEPDQWTNFN-----VGPQLECMKHNK-HSNIIATGGK-----------------ENDLKLWDLNTT 159 (444)
Q Consensus 103 ~~~dg~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~vwd~~~~ 159 (444)
+...+.|..++..++.... +.. .......+++.+ ++++.++... .+.|..|+..++
T Consensus 97 ~d~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQ-LATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EETTTEEEEECTTCEECEE-EESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EECCCCEEEEeCCCCEEEE-ecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 6555568888876554321 111 123468899999 8877766432 367888887766
Q ss_pred eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEE
Q psy8152 160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCI 238 (444)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~ 238 (444)
+......... ....|+++|++++|+++ +..+.|.+|++. .........+..... ...+
T Consensus 176 ~~~~~~~~~~-------------------~p~gia~~~dg~~lyv~d~~~~~I~~~~~~-~~~~~~~~~~~~~~g-P~gi 234 (322)
T 2fp8_A 176 ETTLLLKELH-------------------VPGGAEVSADSSFVLVAEFLSHQIVKYWLE-GPKKGTAEVLVKIPN-PGNI 234 (322)
T ss_dssp EEEEEEEEES-------------------CCCEEEECTTSSEEEEEEGGGTEEEEEESS-STTTTCEEEEEECSS-EEEE
T ss_pred EEEEeccCCc-------------------cCcceEECCCCCEEEEEeCCCCeEEEEECC-CCcCCccceEEeCCC-CCCe
Confidence 5432222111 35679999999866554 567899999987 211111111111223 6789
Q ss_pred EEccCCCEEEEEcC----------CCcEEEEEcCCCCcceeEeccc----cCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 239 TTTNQSHYVIVGST----------TGDMMAVDLRGKGKPCYKYKGF----AGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 239 ~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~h----~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
++.++|++.++... .+.|..++.. ++.+..+... ...++.+++ .+++++++....+.|.++++
T Consensus 235 ~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 235 KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF--GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT--SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred EECCCCCEEEEecCcccccccCCCccEEEEECCC--CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 99999987766544 4568888763 6777666533 234666766 35555555556788888887
Q ss_pred CC
Q psy8152 305 HS 306 (444)
Q Consensus 305 ~~ 306 (444)
..
T Consensus 312 ~~ 313 (322)
T 2fp8_A 312 DK 313 (322)
T ss_dssp --
T ss_pred cc
Confidence 54
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.02 E-value=1.7e-06 Score=87.63 Aligned_cols=276 Identities=13% Similarity=0.138 Sum_probs=167.2
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec-
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS- 84 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~- 84 (444)
+..|.+|+..+-|..|+..+++. ..+....+...|.++... +++ .|..|+..+-|.+|+..+++........
T Consensus 183 ~g~lwigt~~~Gl~~~~~~~~~~-----~~~~~~~~~~~i~~i~~d-~~g-~lwigt~~~Gl~~~~~~~~~~~~~~~~~~ 255 (795)
T 4a2l_A 183 GDQIYIGTSTDGLYTYSITQKTF-----EKVIPILGTKQIQAILQQ-SPT-RIWVATEGAGLFLINPKTKEIKNYLHSPS 255 (795)
T ss_dssp TTEEEEEESSSCEEEEETTTCCE-----EECC----CCCEEEEEEE-ETT-EEEEEEBSSCEEEEETTTTEEEEECCCTT
T ss_pred CCCEEEEECCCCEEEEeCCCCeE-----EEecCCCCCCeeEEEEEc-CCC-CEEEEECCCCeEEEeCCCCeEEEeecCCC
Confidence 35567777765688888776652 111111235678888887 444 4556665556889998766543321100
Q ss_pred ----cccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCcccccc-------ccCCCeEEEEEeccCCEEEEeeCCCeEE
Q psy8152 85 ----FGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNF-------NVGPQLECMKHNKHSNIIATGGKENDLK 152 (444)
Q Consensus 85 ----~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 152 (444)
-....|.++..+ ...|..|+.. -|.+|+..+++...... -....|.++...++|. |..|+.++-|.
T Consensus 256 ~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~ 333 (795)
T 4a2l_A 256 NPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLN 333 (795)
T ss_dssp CTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEE
T ss_pred CccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeE
Confidence 113567777654 3345556665 68889987665432111 1235699999988775 55667667788
Q ss_pred EEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe---
Q psy8152 153 LWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD--- 229 (444)
Q Consensus 153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--- 229 (444)
+|+..++.... +..... +.+ .....|.++...+++. |..|+.++-|..|+.. ... ...+.
T Consensus 334 ~~~~~~~~~~~-~~~~~~--------~~~---l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~---~~~-~~~~~~~~ 396 (795)
T 4a2l_A 334 YYHPIRNRFKN-IRNIPY--------KNS---LSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPI---TQR-FTSYTLQE 396 (795)
T ss_dssp EECGGGGSSEE-ECCCTT--------SSS---CSCSSEEEEEECTTSC-EEEEESSSCEEEECTT---TCC-EEEECCC-
T ss_pred EeCCCcccceE-EcCCCC--------CCC---CCCCeeEEEEECCCCC-EEEEECCCCeEEEcCC---CCc-EEEEecCC
Confidence 88876543221 111000 000 0122589999888776 4457777778999877 222 22221
Q ss_pred ------CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec----cccCceeEEEecCCCCEEEEEECCCcE
Q psy8152 230 ------IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK----GFAGCVKDIACPLNENLILSVSLDRHF 299 (444)
Q Consensus 230 ------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~h~~~i~~~~~s~~~~~l~s~~~dg~i 299 (444)
.....|.+++..+++++|.+|+.++-|.+|+..+ ++...... .+...|.++...+++.+.+. +. +.|
T Consensus 397 ~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~-~Gl 473 (795)
T 4a2l_A 397 DESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS-GQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TL-SAL 473 (795)
T ss_dssp -----CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT-CCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ES-SCE
T ss_pred CCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC-CcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ec-Cce
Confidence 1235688999888888566777777799999887 54332211 13457899998888875554 44 458
Q ss_pred EEEEcCCCceE
Q psy8152 300 RVHDFHSKKLL 310 (444)
Q Consensus 300 ~vw~~~~~~~~ 310 (444)
.+|+..+++..
T Consensus 474 ~~~~~~~~~~~ 484 (795)
T 4a2l_A 474 VRFNPEQRSFT 484 (795)
T ss_dssp EEEETTTTEEE
T ss_pred eEEeCCCCeEE
Confidence 89998876553
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.02 E-value=7e-08 Score=81.55 Aligned_cols=175 Identities=13% Similarity=0.099 Sum_probs=123.1
Q ss_pred ccCCC--eEEEEEeccCCEEEEeeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152 125 NVGPQ--LECMKHNKHSNIIATGGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD 200 (444)
Q Consensus 125 ~~~~~--v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 200 (444)
.|... ...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+..... .......+.+.
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-------------------~FgeGit~~g~ 97 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-------------------YFGEGISDWKD 97 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-------------------CCEEEEEEETT
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-------------------cceeEEEEeCC
Confidence 45443 4788888 666667777766 899999999998887765433 33333333444
Q ss_pred EEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc--c--
Q psy8152 201 KVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF--A-- 275 (444)
Q Consensus 201 ~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h--~-- 275 (444)
.|. +.-.++.+.+||.. +.+.+.++..... ...+++++..|+.+...+.|.++|..+ .+.+.++... .
T Consensus 98 ~ly~ltw~~~~v~v~D~~---t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T-~~v~~~I~V~~~g~~ 170 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIR---NLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPES-LTPVRTITVTAHGEE 170 (262)
T ss_dssp EEEEEESSSSEEEEEETT---TCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTT-CSEEEEEECEETTEE
T ss_pred EEEEEEeeCCEEEEEECc---cCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCC-CeEEEEEEeccCCcc
Confidence 444 44568899999999 7888888775432 233445777777766678899999999 8888887642 1
Q ss_pred -CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC-------------CceeEEEEcCC
Q psy8152 276 -GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ-------------SRLTSILVRSD 327 (444)
Q Consensus 276 -~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-------------~~i~~~~~~~~ 327 (444)
..++.+.|. +|.+.+..-.+..|.+.|..+++.+..+... .-.+.+|+.+.
T Consensus 171 ~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 171 LPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp CCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred ccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 334557776 6665555556889999999999999888642 23588888865
No 254
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.01 E-value=6e-08 Score=83.01 Aligned_cols=198 Identities=10% Similarity=-0.006 Sum_probs=134.6
Q ss_pred ccCC--CeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152 125 NVGP--QLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD 200 (444)
Q Consensus 125 ~~~~--~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 200 (444)
.|.. ....++|++++.++++.+. ++.|+++|+.+++.+..+..... .....+++.. +.
T Consensus 16 p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-----------------~fgeGi~~~g-~~ 77 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-----------------YFGEGLTLLN-EK 77 (266)
T ss_dssp ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-----------------CCEEEEEEET-TE
T ss_pred ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-----------------cceEEEEEeC-CE
Confidence 4543 3579999988654444443 58999999999998877653322 0133455542 24
Q ss_pred EEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc-----
Q psy8152 201 KVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA----- 275 (444)
Q Consensus 201 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~----- 275 (444)
+.++.-.++.+.++|.. +.+.+.++... .+ ....++++|+.|+++..++.|.++|..+ .+.+.++.--.
T Consensus 78 lyv~t~~~~~v~viD~~---t~~v~~~i~~g-~~-~g~glt~Dg~~l~vs~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 78 LYQVVWLKNIGFIYDRR---TLSNIKNFTHQ-MK-DGWGLATDGKILYGSDGTSILYEIDPHT-FKLIKKHNVKYNGHRV 151 (266)
T ss_dssp EEEEETTCSEEEEEETT---TTEEEEEEECC-SS-SCCEEEECSSSEEEECSSSEEEEECTTT-CCEEEEEECEETTEEC
T ss_pred EEEEEecCCEEEEEECC---CCcEEEEEECC-CC-CeEEEEECCCEEEEECCCCeEEEEECCC-CcEEEEEEECCCCccc
Confidence 44555568899999998 77778877644 11 2344666887777777789999999999 88888877321
Q ss_pred CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--------------CceeEEEEcCCCcccccchhhhhcc
Q psy8152 276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--------------SRLTSILVRSDFSLENETKKEEQEH 341 (444)
Q Consensus 276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~ 341 (444)
..++.+.|. ++...+.....+.|.+.|..+++.+..+... ...+.+++.++-. ++++
T Consensus 152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~--------~lfV 222 (266)
T 2iwa_A 152 IRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK--------RIFV 222 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT--------EEEE
T ss_pred ccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC--------EEEE
Confidence 246778887 6655555556789999999999999988643 2457898886522 4666
Q ss_pred ccccCCCccccCCC
Q psy8152 342 SEEKGDSDEKYDPE 355 (444)
Q Consensus 342 s~~~d~~i~~W~~~ 355 (444)
++...+.+.+-++.
T Consensus 223 Tgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 223 TGKLWPKLFEIKLH 236 (266)
T ss_dssp EETTCSEEEEEEEE
T ss_pred ECCCCCeEEEEEEe
Confidence 66555555444443
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.01 E-value=3e-06 Score=85.86 Aligned_cols=273 Identities=9% Similarity=0.071 Sum_probs=170.1
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeec---ccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVK---YITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
...|.+|+.. -|.+|+..++.. ..+.... ..-....|.++... +++ .|..|+.++-|.+|+..+........
T Consensus 273 ~g~lWigt~~-Gl~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~D-~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~ 347 (795)
T 4a2l_A 273 QNRLWIGTFN-DLNIYHEGTDSF--ASYSSNPVENGSLSQRSVRSIFMD-SQG-GMWLGTYFGGLNYYHPIRNRFKNIRN 347 (795)
T ss_dssp TSCEEEEESS-CEEEEETTTTEE--EEECCCTTSTTSCSSSCEEEEEEC-TTS-CEEEEESSSCEEEECGGGGSSEEECC
T ss_pred CCCEEEEeCC-hhheEcCCCCeE--EEEecCCCCCCCCCCCcEEEEEEe-CCc-CEEEEECCCCeEEeCCCcccceEEcC
Confidence 4567777766 578888776652 2221110 00134679999988 444 56678877889999876554332111
Q ss_pred ec----cccccEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccc--------cCCCeEEEEEeccCCEEEEeeCCC
Q psy8152 83 VS----FGEGDIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFN--------VGPQLECMKHNKHSNIIATGGKEN 149 (444)
Q Consensus 83 ~~----~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~ 149 (444)
.. -....|.++..+. ..|..|+.++-|..|+..+++....... ....|.+++..+++++|..|+.++
T Consensus 348 ~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~ 427 (795)
T 4a2l_A 348 IPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAG 427 (795)
T ss_dssp CTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcC
Confidence 00 1134578886543 3566788888899999887655431111 235689999888887577778777
Q ss_pred eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152 150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD 229 (444)
Q Consensus 150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 229 (444)
-|.+|+..+++... +..... . .....|.++...+++.+.+.. . +-|.+|+.. ..... .+.
T Consensus 428 Gl~~~d~~~~~~~~-~~~~~~---------~----l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~---~~~~~-~~~ 487 (795)
T 4a2l_A 428 GLSILHRNSGQVEN-FNQRNS---------Q----LVNENVYAILPDGEGNLWLGT-L-SALVRFNPE---QRSFT-TIE 487 (795)
T ss_dssp EEEEEETTTCCEEE-ECTTTS---------C----CSCSCEEEEEECSSSCEEEEE-S-SCEEEEETT---TTEEE-ECC
T ss_pred ceeEEeCCCCcEEE-eecCCC---------C----cCCCeeEEEEECCCCCEEEEe-c-CceeEEeCC---CCeEE-Ecc
Confidence 89999988765432 211000 0 011258899988887755544 4 458889977 33221 121
Q ss_pred -------CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-------cccCceeEEEecCCCCEEEEEEC
Q psy8152 230 -------IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-------GFAGCVKDIACPLNENLILSVSL 295 (444)
Q Consensus 230 -------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~h~~~i~~~~~s~~~~~l~s~~~ 295 (444)
.....|.++...++|++.+... +-|..|+..+ ++. .+. .+...|.++...++|.+.++. .
T Consensus 488 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~-~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~ 561 (795)
T 4a2l_A 488 KEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEG-LDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGT-R 561 (795)
T ss_dssp BCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEET-TEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-S
T ss_pred ccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCC-CeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-C
Confidence 1235688999998887666544 4588899876 554 222 134578999998888865543 3
Q ss_pred CCcEEEEEcCCCceE
Q psy8152 296 DRHFRVHDFHSKKLL 310 (444)
Q Consensus 296 dg~i~vw~~~~~~~~ 310 (444)
. .|..|+..+++..
T Consensus 562 ~-Gl~~~d~~~~~~~ 575 (795)
T 4a2l_A 562 E-GFYCFNEKDKQIK 575 (795)
T ss_dssp S-CEEEEETTTTEEE
T ss_pred C-CceeECCCCCcEE
Confidence 4 5888998776553
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.92 E-value=2.2e-07 Score=78.54 Aligned_cols=182 Identities=7% Similarity=0.057 Sum_probs=128.4
Q ss_pred eEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc
Q psy8152 130 LECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG 209 (444)
Q Consensus 130 v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 209 (444)
...+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ .... ..--.+++.. +++.++.-.++
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-----------------~FgeGit~~g-~~Ly~ltw~~~ 116 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-----------------IFAEGLASDG-ERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-----------------CCEEEEEECS-SCEEEEESSSC
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-----------------cceeEEEEeC-CEEEEEEccCC
Confidence 4688887 4667777888899999999999988776 3222 0122344433 25555566789
Q ss_pred eEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc--cc---CceeEEEec
Q psy8152 210 YVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--FA---GCVKDIACP 284 (444)
Q Consensus 210 ~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--h~---~~i~~~~~s 284 (444)
.+.+||.. +.+.+.++...... ..++ ++++.|+.+..++.|.++|..+ .+.+.++.. +. ..++.+.|.
T Consensus 117 ~v~V~D~~---Tl~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 117 LLFTWSGM---PPQRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp EEEEEETT---TTEEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEEECC---cCcEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe
Confidence 99999999 88888888754332 3444 5678888877789999999999 888888773 21 245667776
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCceEEEeecC--------------CceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152 285 LNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--------------SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE 350 (444)
Q Consensus 285 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~ 350 (444)
+|.+.+..-....|.+.|..+++.+..+... .-.+.+|+.+.- .++++|+ |
T Consensus 190 -dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~--------~rlfVTG------K 254 (268)
T 3nok_A 190 -NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS--------GRIFMTG------K 254 (268)
T ss_dssp -TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT--------CCEEEEE------T
T ss_pred -CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC--------CEEEEeC------C
Confidence 6665555546789999999999999887632 246888888652 2566665 6
Q ss_pred ccC
Q psy8152 351 KYD 353 (444)
Q Consensus 351 ~W~ 353 (444)
.|.
T Consensus 255 ~Wp 257 (268)
T 3nok_A 255 LWP 257 (268)
T ss_dssp TCS
T ss_pred CCC
Confidence 775
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.91 E-value=1.7e-07 Score=79.12 Aligned_cols=178 Identities=10% Similarity=0.059 Sum_probs=123.2
Q ss_pred ccEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccccCCCeEE--EEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152 88 GDIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLEC--MKHNKHSNIIATGGKENDLKLWDLNTTKNIFS 164 (444)
Q Consensus 88 ~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 164 (444)
.....+..++ .++++.+.+|.|+++|+.+++.+... -...... +++. .+.+.+..-.++.+.+||..+.+.+.+
T Consensus 55 ~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 55 AFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 3335565544 45666777889999999999988755 3334433 4443 234444555689999999999999988
Q ss_pred eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC--C---CCeeEEE
Q psy8152 165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP--D---VALSCIT 239 (444)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~---~~i~~~~ 239 (444)
+..... -..++ ++++.|+.+..++.|+++|.. +.+.+.++... . ..++.+.
T Consensus 132 i~~~~e-------------------GwGLt--~Dg~~L~vSdGs~~l~~iDp~---T~~v~~~I~V~~~g~~v~~lNeLe 187 (268)
T 3nok_A 132 TRYSGE-------------------GWGLC--YWNGKLVRSDGGTMLTFHEPD---GFALVGAVQVKLRGQPVELINELE 187 (268)
T ss_dssp EECSSC-------------------CCCEE--EETTEEEEECSSSEEEEECTT---TCCEEEEEECEETTEECCCEEEEE
T ss_pred EeCCCc-------------------eeEEe--cCCCEEEEECCCCEEEEEcCC---CCeEEEEEEeCCCCcccccccccE
Confidence 865332 22333 567777777778999999988 66666665532 1 2345677
Q ss_pred EccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-------------cCceeEEEecCCCCEEEEEE
Q psy8152 240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-------------AGCVKDIACPLNENLILSVS 294 (444)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-------------~~~i~~~~~s~~~~~l~s~~ 294 (444)
|. +|+..+.....+.|.+.|..+ ++.+..+... ....+.|||+|+++.|+..+
T Consensus 188 ~~-dG~lyanvw~s~~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 188 CA-NGVIYANIWHSSDVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EE-TTEEEEEETTCSEEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred Ee-CCEEEEEECCCCeEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 76 776666666788999999999 9988877621 13568899999876555544
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=7.3e-07 Score=74.69 Aligned_cols=187 Identities=14% Similarity=0.113 Sum_probs=128.5
Q ss_pred ccC--CCeEEEEEeccCCEEEEeeCC--CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-
Q psy8152 125 NVG--PQLECMKHNKHSNIIATGGKE--NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS- 199 (444)
Q Consensus 125 ~~~--~~v~~~~~~~~~~~l~~~~~d--~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 199 (444)
.|. .-...+.|++ +.++.+.+.. ..|+.+|+.+++.+........ .......+.+
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-------------------~fgeGi~~~~~ 75 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-------------------YFGAGIVAWRD 75 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-------------------CCEEEEEEETT
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-------------------cceeEEEEeCC
Confidence 454 3466889986 5555666654 4899999999999887765443 3333233334
Q ss_pred CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecccc----
Q psy8152 200 DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA---- 275 (444)
Q Consensus 200 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~---- 275 (444)
++.+..-.++.+.+||.. +.+.+.++...... ..+ .+++..|+.+..++.|.++|..+ .+.+.++....
T Consensus 76 ~ly~ltw~~~~v~v~D~~---tl~~~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t-~~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLA---TLTPRARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDT-LQQVGSIKVTAGGRP 148 (243)
T ss_dssp EEEEEESSSSEEEEEETT---TTEEEEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTT-CCEEEEEECEETTEE
T ss_pred EEEEEEeeCCEEEEEECC---cCcEEEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCC-CeEEEEEEEccCCcc
Confidence 444455678999999999 88888888754332 344 45677777767788999999999 88888877321
Q ss_pred -CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC--------------CceeEEEEcCCCcccccchhhhhc
Q psy8152 276 -GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ--------------SRLTSILVRSDFSLENETKKEEQE 340 (444)
Q Consensus 276 -~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~~~~~~~~~~ 340 (444)
..++.+.|. +|+..+..-....|.+.|..+++.+..+... .-.+.+++.+.- .+++
T Consensus 149 ~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~--------~~lf 219 (243)
T 3mbr_X 149 LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH--------DRLF 219 (243)
T ss_dssp CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT--------TEEE
T ss_pred cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC--------CEEE
Confidence 345666665 5665555446789999999999999887632 235788887652 2566
Q ss_pred cccccCCCccccC
Q psy8152 341 HSEEKGDSDEKYD 353 (444)
Q Consensus 341 ~s~~~d~~i~~W~ 353 (444)
+++ |.|.
T Consensus 220 VTG------K~wp 226 (243)
T 3mbr_X 220 VTG------KRWP 226 (243)
T ss_dssp EEE------TTCS
T ss_pred EEC------CCCC
Confidence 665 6775
No 259
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.85 E-value=5.3e-06 Score=76.16 Aligned_cols=238 Identities=9% Similarity=0.007 Sum_probs=138.9
Q ss_pred CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEEEE
Q psy8152 15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV 93 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~ 93 (444)
...|+.+++..... ..+. .....+..++|. +....|+ +-...+.|+.+++........+........-+++
T Consensus 95 ~~~I~~i~~~~~~~-----~~~~--~~~~~~~gl~~d-~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav 166 (386)
T 3v65_B 95 RIDIRQVLPHRSEY-----TLLL--NNLENAIALDFH-HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV 166 (386)
T ss_dssp BSCEEEECTTSCCC-----EEEE--CSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEE
T ss_pred CccceeeccCCCcE-----EEEe--cCCCccEEEEEe-cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEE
Confidence 35677777765542 1111 223457899999 4455555 5455688999998765533332211112233566
Q ss_pred EeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEe-eCC-CeEEEEEcCCceeeeeeecccc
Q psy8152 94 SRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATG-GKE-NDLKLWDLNTTKNIFSAKNVSH 170 (444)
Q Consensus 94 s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-~~i~vwd~~~~~~~~~~~~~~~ 170 (444)
.+.+.. +++-...+.|.+.++..................+++.|.+..|+.+ ... +.|..+++..............
T Consensus 167 d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~ 246 (386)
T 3v65_B 167 DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF 246 (386)
T ss_dssp ETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC
Confidence 765544 4555556788888877544332222333567899999855555544 334 6788888764322221111111
Q ss_pred eeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152 171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV 249 (444)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 249 (444)
+.+.|+++|++..|. +-+..+.|..+++. .......+.........|++ ..+.++++
T Consensus 247 ------------------~PnGlavd~~~~~lY~aD~~~~~I~~~d~d---G~~~~~~~~~~~~~P~giav-~~~~ly~t 304 (386)
T 3v65_B 247 ------------------WPNGLTIDYAGRRMYWVDAKHHVIERANLD---GSHRKAVISQGLPHPFAITV-FEDSLYWT 304 (386)
T ss_dssp ------------------CEEEEEEEGGGTEEEEEETTTTEEEEECTT---SCSCEEEECSSCSSEEEEEE-ETTEEEEE
T ss_pred ------------------CeeeEEEeCCCCEEEEEECCCCEEEEEeCC---CCeeEEEEECCCCCceEEEE-ECCEEEEe
Confidence 478999998765554 44567789999987 22222222223344577888 45566677
Q ss_pred EcCCCcEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152 250 GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC 283 (444)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~ 283 (444)
....+.|..++..+ ++.+..+.........|++
T Consensus 305 d~~~~~V~~~~~~~-G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 305 DWHTKSINSANKFT-GKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp ETTTTEEEEEETTT-CCSCEEEECSCSCCCCEEE
T ss_pred eCCCCeEEEEECCC-CcceEEEccCCCCCceEEE
Confidence 77788899998767 7777766543333444443
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.85 E-value=1.8e-06 Score=72.40 Aligned_cols=181 Identities=11% Similarity=0.048 Sum_probs=120.2
Q ss_pred ccEEEEEeCCCe-EEEEecC--CcEEEEEcCCCCccccccccCCCeEEEEEeccCC-EEEEeeCCCeEEEEEcCCceeee
Q psy8152 88 GDIVGVSRYDEC-ILTAVKS--GDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSN-IIATGGKENDLKLWDLNTTKNIF 163 (444)
Q Consensus 88 ~~v~~~s~~~~~-l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vwd~~~~~~~~ 163 (444)
.....+..++.. +.+.+.. ..|+++|+.+++.+... .-..........+.++ +....-.++.+.+||..+.+.+.
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRA-EVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEE-eCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 344556554454 4555554 48999999999987633 3233333333333334 44445568999999999999988
Q ss_pred eeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCC-----CCeeEE
Q psy8152 164 SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD-----VALSCI 238 (444)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----~~i~~~ 238 (444)
++..... -..++ ++++.|+++..++.|.++|.. +.+.+.++.... ..++-+
T Consensus 100 ti~~~~~-------------------Gwglt--~dg~~L~vSdgs~~l~~iDp~---t~~~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 100 RFRYPGE-------------------GWALT--SDDSHLYMSDGTAVIRKLDPD---TLQQVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp EEECSSC-------------------CCEEE--ECSSCEEEECSSSEEEEECTT---TCCEEEEEECEETTEECCCEEEE
T ss_pred EEeCCCC-------------------ceEEe--eCCCEEEEECCCCeEEEEeCC---CCeEEEEEEEccCCcccccceee
Confidence 8865433 22343 567666666678899999998 666666665421 234566
Q ss_pred EEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-------------cCceeEEEecCCCCEEEEEEC
Q psy8152 239 TTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-------------AGCVKDIACPLNENLILSVSL 295 (444)
Q Consensus 239 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-------------~~~i~~~~~s~~~~~l~s~~~ 295 (444)
.|. +|+..+.......|.+.|.++ ++.+..+... ....+.|+++|+++.|+..+.
T Consensus 156 e~~-~G~lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 156 EWV-NGELLANVWLTSRIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEE-TTEEEEEETTTTEEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEe-CCEEEEEECCCCeEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 665 676666666788999999999 9988877621 125688999998876666553
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=1.4e-05 Score=80.83 Aligned_cols=275 Identities=11% Similarity=0.099 Sum_probs=164.1
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeee--------ec--ccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQN--------VK--YITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF 74 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~--------~~--~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 74 (444)
....|.+|+..+-|.+++..+... ..+.. .. ..-....|.++... .++ .|..|+.++-|..|+..+
T Consensus 267 ~~g~lWigt~~~Gl~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D-~~g-~lWigt~~~Gl~~~~~~~ 342 (781)
T 3v9f_A 267 KDNKLWIATELNGIMILDLQQNQF--LLPEQIRFEFIREGDNNYSLSNASARYIFQD-SFN-NIWIGTWGGGINFISNAP 342 (781)
T ss_dssp TTSEEEEEESSSCEEEEETTCC-----------CEEECBCSSTTSBSSSCEEEEEEC-SSC-CEEEEEBSSCEEEECSSC
T ss_pred CCCCEEEEeCCCCeEEECCCCCee--eeeeccccccccCCCCCCCCCCCeEEEEEEe-CCC-CEEEEecCCeEEEeCCCC
Confidence 346678888766788888876652 11111 00 00234679999888 444 577788778899998876
Q ss_pred Cccccceee-------ccccccEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccc---cccCCCeEEEEEeccCCEEE
Q psy8152 75 KNFNTNTDV-------SFGEGDIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTN---FNVGPQLECMKHNKHSNIIA 143 (444)
Q Consensus 75 ~~~~~~~~~-------~~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~ 143 (444)
......... .-....|.++..+. ..|..|+.++-|..|+..++...... ......|.++...+++. |.
T Consensus 343 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lW 421 (781)
T 3v9f_A 343 PTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LW 421 (781)
T ss_dssp CSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EE
T ss_pred CcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EE
Confidence 544322110 01235678886653 45677777777899997655433211 11345688888877665 44
Q ss_pred EeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCcc
Q psy8152 144 TGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRR 223 (444)
Q Consensus 144 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 223 (444)
.|+..+-|..++..+++... +.... .....|.++...+++.+. .|+. +-|.+|+.. ...
T Consensus 422 igt~~~Gl~~~~~~~~~~~~-~~~~~---------------~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~---~~~ 480 (781)
T 3v9f_A 422 FGTYLGNISYYNTRLKKFQI-IELEK---------------NELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLA---SKK 480 (781)
T ss_dssp EEETTEEEEEECSSSCEEEE-CCSTT---------------TCCCCEEEEEECTTSEEE-EEET-TEEEEEESS---SSS
T ss_pred EEeccCCEEEEcCCCCcEEE-eccCC---------------CCCCeEEEEEECCCCCEE-EEEC-CceEEEeCC---CCe
Confidence 56666678889887665332 21100 001258888888776544 4555 568889987 322
Q ss_pred ceEEEeCC-----CCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc----ccCceeEEEecCCCCEEEEEE
Q psy8152 224 PVLKVDIP-----DVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG----FAGCVKDIACPLNENLILSVS 294 (444)
Q Consensus 224 ~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----h~~~i~~~~~s~~~~~l~s~~ 294 (444)
........ ...|.++...++|++.+ |+..+-|..|+..+ ++ +..+.. ....|.++...++|.+.++ +
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~-~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T 556 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDM-QL-VRKFNQYEGFCSNTINQIYRSSKGQMWLA-T 556 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTC-CE-EEEECTTTTCSCSCEEEEEECTTSCEEEE-E
T ss_pred EEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCC-Ce-EEEccCCCCCCCCeeEEEEECCCCCEEEE-E
Confidence 22211111 35688999988887655 44434477888776 43 333321 2356889998888875554 4
Q ss_pred CCCcEEEEEcCCCce
Q psy8152 295 LDRHFRVHDFHSKKL 309 (444)
Q Consensus 295 ~dg~i~vw~~~~~~~ 309 (444)
..|.|..|+..+++.
T Consensus 557 ~~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 557 GEGLVCFPSARNFDY 571 (781)
T ss_dssp TTEEEEESCTTTCCC
T ss_pred CCCceEEECCCCCcE
Confidence 466558888877654
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.83 E-value=1.7e-05 Score=71.71 Aligned_cols=236 Identities=10% Similarity=0.016 Sum_probs=136.5
Q ss_pred CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEEEEE
Q psy8152 16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS 94 (444)
Q Consensus 16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s 94 (444)
..|+..++..... ..+. .....+..++|. +....|+ +-...+.|+.+++........+........-.++.
T Consensus 53 ~~I~~i~~~g~~~-----~~~~--~~~~~~~~l~~d-~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd 124 (349)
T 3v64_C 53 IDIRQVLPHRSEY-----TLLL--NNLENAIALDFH-HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVD 124 (349)
T ss_dssp SCEEEECTTSCCE-----EEEE--CSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE
T ss_pred cceEEEeCCCCee-----EEee--cCCCceEEEEEe-ccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEe
Confidence 4566666655432 1111 223457899999 4555555 44456889999987655433322111123345666
Q ss_pred eCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEE-EEeeCC-CeEEEEEcCCceeeeeeecccce
Q psy8152 95 RYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNII-ATGGKE-NDLKLWDLNTTKNIFSAKNVSHR 171 (444)
Q Consensus 95 ~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d-~~i~vwd~~~~~~~~~~~~~~~~ 171 (444)
+.+.. +++-...+.|.+.++..................+++.|.+..| ++-... +.|..+++.............
T Consensus 125 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~-- 202 (349)
T 3v64_C 125 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL-- 202 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSC--
T ss_pred cCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC--
Confidence 65544 4555567889999987554332222334567899999954444 444444 778888876432221111111
Q ss_pred eeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE
Q psy8152 172 VLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG 250 (444)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 250 (444)
.+.+.|+++|++..|. +-...+.|..+++. .......+.........|++ ..+.++++-
T Consensus 203 ----------------~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d---G~~~~~~~~~~~~~P~giav-~~~~ly~td 262 (349)
T 3v64_C 203 ----------------FWPNGLTIDYAGRRMYWVDAKHHVIERANLD---GSHRKAVISQGLPHPFAITV-FEDSLYWTD 262 (349)
T ss_dssp ----------------SCEEEEEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEECSSCSSEEEEEE-ETTEEEEEE
T ss_pred ----------------CCcceEEEeCCCCEEEEEECCCCEEEEEeCC---CCceEEEEeCCCCCceEEEE-ECCEEEEec
Confidence 1478999998775554 44567789999988 22111112223344577887 356666677
Q ss_pred cCCCcEEEEEcCCCCcceeEeccccCceeEEE
Q psy8152 251 STTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA 282 (444)
Q Consensus 251 ~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~ 282 (444)
...+.|..++..+ ++.+..+.........++
T Consensus 263 ~~~~~V~~~~~~~-G~~~~~i~~~~~~p~gi~ 293 (349)
T 3v64_C 263 WHTKSINSANKFT-GKNQEIIRNKLHFPMDIH 293 (349)
T ss_dssp TTTTEEEEEETTT-CCSCEEEECSCSCCCCEE
T ss_pred CCCCeEEEEEccC-CCccEEeccCCCCCceEE
Confidence 7778888888666 766666653333333443
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.82 E-value=8.4e-06 Score=72.31 Aligned_cols=237 Identities=8% Similarity=-0.056 Sum_probs=135.2
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCC--cEEEEEcCCCCcc
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSG--DVKLWRYKTEPDQ 120 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~ 120 (444)
.....++|+ +++.++++....+.|..|+... .....+.. .....-.++.++++++++..... .|..++..+++..
T Consensus 32 ~~pegia~~-~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASA-PDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 567889999 6787666666789999999864 33333322 22222344567788665544332 4666777776654
Q ss_pred ccccc--cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCce-eeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152 121 WTNFN--VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTK-NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP 197 (444)
Q Consensus 121 ~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 197 (444)
. +.. .......++..+.+..+++....+.|.++|...++ .+........ . ..+. ......+.| +|
T Consensus 109 ~-~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~---~--~~~~----~~~~~pngi--s~ 176 (306)
T 2p4o_A 109 T-LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA---R--SNSE----SVFPAANGL--KR 176 (306)
T ss_dssp E-EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS---C--SSTT----CCSCSEEEE--EE
T ss_pred E-EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccc---c--cccc----CCCCcCCCc--Cc
Confidence 2 221 12233455555555445555467889999987543 1211111000 0 0000 000124455 78
Q ss_pred CCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcce--eEeccc
Q psy8152 198 NSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC--YKYKGF 274 (444)
Q Consensus 198 ~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~h 274 (444)
++++|+ +-...+.|..|++...........+.. ......+++.++|+++++....+.|.+++.. ++.. ..+...
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~--G~~~~~~~~~~~ 253 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD--RSTTIIAQAEQG 253 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT--CCEEEEECGGGT
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC--CCEEEEeecccc
Confidence 886554 555678999999871111111111211 1345779999999887777778889999964 5542 233333
Q ss_pred cCceeEEEec---CCCCEEEEEECCC
Q psy8152 275 AGCVKDIACP---LNENLILSVSLDR 297 (444)
Q Consensus 275 ~~~i~~~~~s---~~~~~l~s~~~dg 297 (444)
....++++|. |+++.|+.++..+
T Consensus 254 ~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 254 VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred cCCceEEEEecccCCCCEEEEECCCC
Confidence 3567899998 8887777666543
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=3.4e-05 Score=77.96 Aligned_cols=274 Identities=12% Similarity=0.110 Sum_probs=160.3
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecc---cCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCcccccee
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKY---ITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTD 82 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~ 82 (444)
...|.+|+.. -|.+|+..+++. ..+..... .-....|.++... + ...|..|+..+-|.+++..++.......
T Consensus 221 ~g~lwigt~~-Gl~~~d~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~d-~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~ 295 (781)
T 3v9f_A 221 NGNIWIGTSK-GLALFNANTETF--TNFHNNPGNIHGALSSYIFSIKQL-K-DNKLWIATELNGIMILDLQQNQFLLPEQ 295 (781)
T ss_dssp TCCEEEEETT-EEEEEETTTTEE--EC-----------CCCCEEEEEEC-T-TSEEEEEESSSCEEEEETTCC-------
T ss_pred CCCEEEEeCC-cHheECCCCCcE--EEEEcCCCccccccCceEEEEEEC-C-CCCEEEEeCCCCeEEECCCCCeeeeeec
Confidence 4557777766 578888766652 11111100 0124578999887 3 4456667765678889987665432211
Q ss_pred -------e-----ccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCcccccc---------ccCCCeEEEEEeccCC
Q psy8152 83 -------V-----SFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNF---------NVGPQLECMKHNKHSN 140 (444)
Q Consensus 83 -------~-----~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~ 140 (444)
. .-....|.++..+ ...|..|+.++-|..++........... .....|.+++..+++.
T Consensus 296 ~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 375 (781)
T 3v9f_A 296 IRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK 375 (781)
T ss_dssp --CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC
T ss_pred cccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC
Confidence 0 0124567777554 2356778878889999877655432110 0235688888877665
Q ss_pred EEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCC
Q psy8152 141 IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITT 220 (444)
Q Consensus 141 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 220 (444)
|..|+.++-|.+|+..++.... +..... .....|.++...+++.+. +|+..+-|..|+..
T Consensus 376 -lWigt~~~Gl~~~~~~~~~~~~-~~~~~~--------------~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~--- 435 (781)
T 3v9f_A 376 -LWIGTDGGGINVFENGKRVAIY-NKENRE--------------LLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTR--- 435 (781)
T ss_dssp -EEEEEBSSCEEEEETTEEEEEC-C-------------------CCCSBEEEEEECTTSCEE-EEETTEEEEEECSS---
T ss_pred -EEEEeCCCcEEEEECCCCeEEE-ccCCCC--------------CCCcceEEEEECCCCCEE-EEeccCCEEEEcCC---
Confidence 5566656668889987543221 110000 011258899888777654 46776778888876
Q ss_pred CccceEEEe---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc-----cCceeEEEecCCCCEEEE
Q psy8152 221 QRRPVLKVD---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF-----AGCVKDIACPLNENLILS 292 (444)
Q Consensus 221 ~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h-----~~~i~~~~~s~~~~~l~s 292 (444)
..+ ...+. .....|.++...+++++.+ |+. +-|.+|+..+ ++........ ...|.++...++|.+.+
T Consensus 436 ~~~-~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi- 510 (781)
T 3v9f_A 436 LKK-FQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI- 510 (781)
T ss_dssp SCE-EEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-
T ss_pred CCc-EEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCEEE-
Confidence 332 22222 2345688998888876554 444 4588999876 5443322211 35789999988887555
Q ss_pred EECCCcEEEEEcCCCce
Q psy8152 293 VSLDRHFRVHDFHSKKL 309 (444)
Q Consensus 293 ~~~dg~i~vw~~~~~~~ 309 (444)
|+..+-|..|+..+++.
T Consensus 511 gt~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 511 GTFGGGVGIYTPDMQLV 527 (781)
T ss_dssp EESSSCEEEECTTCCEE
T ss_pred EEcCCCEEEEeCCCCeE
Confidence 45544477888876654
No 265
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.82 E-value=2.3e-06 Score=76.65 Aligned_cols=232 Identities=11% Similarity=-0.012 Sum_probs=136.6
Q ss_pred EEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc--------------------ccCCCeEEEEEec-cCCEEEEeeCCC
Q psy8152 91 VGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF--------------------NVGPQLECMKHNK-HSNIIATGGKEN 149 (444)
Q Consensus 91 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~l~~~~~d~ 149 (444)
.++.+++++++++..++.|..|+..++.... +. .....+..+++.+ +++ |+.+...+
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~ 101 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYY 101 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTT
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCC
Confidence 4456777878888888999999877654331 11 1123578899997 554 55554445
Q ss_pred eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeC-----------------CceE
Q psy8152 150 DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSK-----------------QGYV 211 (444)
Q Consensus 150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~-----------------d~~i 211 (444)
.|..++..++.. ..+..... + ........+++.| +|+++++-.. .+.|
T Consensus 102 ~i~~~d~~~g~~-~~~~~~~~----------~---~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 102 HLSVVGSEGGHA-TQLATSVD----------G---VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp EEEEECTTCEEC-EEEESEET----------T---EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred CEEEEeCCCCEE-EEecccCC----------C---CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence 588888765432 11111000 0 0001367899999 8877766432 3778
Q ss_pred EEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCc--ceeEeccccCceeEEEecCCCC
Q psy8152 212 RVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGK--PCYKYKGFAGCVKDIACPLNEN 288 (444)
Q Consensus 212 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~--~~~~~~~h~~~i~~~~~s~~~~ 288 (444)
..||.. ...... +.........|+|+|++++|+++ +..+.|++|++.. .. ....+....+ ...+++.++|+
T Consensus 168 ~~~d~~---~~~~~~-~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~-~~~~~~~~~~~~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 168 IKYDPS---TKETTL-LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG-PKKGTAEVLVKIPN-PGNIKRNADGH 241 (322)
T ss_dssp EEEETT---TTEEEE-EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS-TTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred EEEeCC---CCEEEE-eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC-CcCCccceEEeCCC-CCCeEECCCCC
Confidence 888876 332211 11111234679999999866554 5668899999874 21 1112211223 67899999998
Q ss_pred EEEEEEC----------CCcEEEEEcCCCceEEEeecC-----CceeEEEEcCCCcccccchhhhhccccccCCCccccC
Q psy8152 289 LILSVSL----------DRHFRVHDFHSKKLLRKDYMQ-----SRLTSILVRSDFSLENETKKEEQEHSEEKGDSDEKYD 353 (444)
Q Consensus 289 ~l~s~~~----------dg~i~vw~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~ 353 (444)
+.++... .+.|..++.. ++.+..+... ..+..+++. ++.+.++....+.|.+++
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~----------~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH----------DGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE----------TTEEEEECSSCSEEEEEE
T ss_pred EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe----------CCEEEEeecCCCceEEEe
Confidence 7666544 4567888764 6666665432 234445432 234555555566676666
Q ss_pred CC
Q psy8152 354 PE 355 (444)
Q Consensus 354 ~~ 355 (444)
+.
T Consensus 311 ~~ 312 (322)
T 2fp8_A 311 YD 312 (322)
T ss_dssp C-
T ss_pred cc
Confidence 54
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.80 E-value=3.3e-05 Score=68.74 Aligned_cols=227 Identities=14% Similarity=0.085 Sum_probs=132.9
Q ss_pred CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCC---ccccc-eeeccccccE
Q psy8152 16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFK---NFNTN-TDVSFGEGDI 90 (444)
Q Consensus 16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~---~~~~~-~~~~~~~~~v 90 (444)
..|+..++...... ..+ .....+.+++|. +.++.|+ +-...+.|+.+++.+. ..... +........-
T Consensus 10 ~~I~~i~~~~~~~~----~~~---~~~~~p~g~~~d-~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT----SLI---PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp SSEEEEETTSCCCE----EEE---CSCSSEEEEEEE-TTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CeEEEEECCCcceE----ehh---cCCCceEEEEEE-eCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 46889998876631 112 224567899999 5555555 4455689999998751 22221 2111112334
Q ss_pred EEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-C-CeEEEEEcCCceeeeeee-
Q psy8152 91 VGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-E-NDLKLWDLNTTKNIFSAK- 166 (444)
Q Consensus 91 ~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vwd~~~~~~~~~~~- 166 (444)
.++.+.+.. +++-...+.|.++++..................+++.|.+..|+.+.. . +.|..+++.... ...+.
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~ 160 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVT 160 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEEC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEE
Confidence 556665544 455566789999998754433212223456789999995555554443 2 678888876422 22221
Q ss_pred cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE-EeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152 167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV-CSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH 245 (444)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 245 (444)
..-. +.+.|+++|++..|.. -+..+.|..+++. ....+.+............|++. .+.
T Consensus 161 ~~~~------------------~P~gla~d~~~~~lY~~D~~~~~I~~~d~d-g~~~~~~~~~~~~~~~P~giav~-~~~ 220 (316)
T 1ijq_A 161 ENIQ------------------WPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVF-EDK 220 (316)
T ss_dssp SSCS------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEE-TTE
T ss_pred CCCC------------------CceEEEEeccCCEEEEEECCCCeEEEEecC-CCceEEEeecCCccCCcEEEEEE-CCE
Confidence 1111 5789999987765554 4567799999998 22222222211122345678875 466
Q ss_pred EEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152 246 YVIVGSTTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
++++-...+.|..++..+ ++.+..+.
T Consensus 221 ly~~d~~~~~V~~~~~~~-g~~~~~i~ 246 (316)
T 1ijq_A 221 VFWTDIINEAIFSANRLT-GSDVNLLA 246 (316)
T ss_dssp EEEEETTTTEEEEEETTT-CCCCEEEE
T ss_pred EEEEECCCCeEEEEeCCC-CcceEEEe
Confidence 666777778899999877 77666664
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.79 E-value=2.9e-07 Score=90.99 Aligned_cols=275 Identities=7% Similarity=-0.042 Sum_probs=144.6
Q ss_pred CcccEEEecCCC-----------cEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc-CCeEEEEeC
Q psy8152 5 DDYNIYIGSSTG-----------AFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS-GQKIKIYDT 72 (444)
Q Consensus 5 ~~~~l~~g~~dg-----------~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~ 72 (444)
++..++.|+.++ .+.+||+.+++. ..+..+.. .+.....++++. .++..+++|+. +..+.+||.
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w--~~~~~~~~-~~~~~~~~~~~~-~~g~lyv~GG~~~~~v~~yd~ 272 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV--SDRTVTVT-KHDMFCPGISMD-GNGQIVVTGGNDAKKTSLYDS 272 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB--CCCEEEEC-SCCCSSCEEEEC-TTSCEEEECSSSTTCEEEEEG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcE--EeCcccCC-CCCCccccccCC-CCCCEEEeCCCCCCceEEecC
Confidence 556677766432 578888887763 22222211 233334456777 67888888884 468999999
Q ss_pred CCCccccceeeccccc-cEEEEEeCCCeEEEEe-cC-----CcEEEEEcCCCCccccc----cccCCCeEEEEEeccCCE
Q psy8152 73 DFKNFNTNTDVSFGEG-DIVGVSRYDECILTAV-KS-----GDVKLWRYKTEPDQWTN----FNVGPQLECMKHNKHSNI 141 (444)
Q Consensus 73 ~~~~~~~~~~~~~~~~-~v~~~s~~~~~l~~~~-~d-----g~i~iw~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~ 141 (444)
.+.+....-..+.... ....+.+++++++.|+ .+ ..+.+||..+.+..... ......-....+..++..
T Consensus 273 ~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~i 352 (656)
T 1k3i_A 273 SSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHA 352 (656)
T ss_dssp GGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSC
T ss_pred cCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCce
Confidence 8776554332222222 2233345899999888 34 56899998876533210 000000000111224445
Q ss_pred EEEeeCC---------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCc--
Q psy8152 142 IATGGKE---------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQG-- 209 (444)
Q Consensus 142 l~~~~~d---------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~-- 209 (444)
++.|+.+ ..+..||..+............. . ...| .+..-.++.|.. ++++++.|+.++
T Consensus 353 yv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~-~--~~~~------~~~~~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 353 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSN-R--GVAP------DAMCGNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEET-T--EECC------CCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred EEEECCCCcEEEecCccceeeeecCCcceeecCCccccc-c--ccCC------CCCCCceEeccCCCCeEEEEeCCCCCC
Confidence 5555444 35677887765433221110000 0 0000 000123444443 567778877532
Q ss_pred ---------eEEEEEcCCCCCccceE--EEeCCCCCeeEEEEccCCCEEEEEcCC-----------CcEEEEEcCCCCcc
Q psy8152 210 ---------YVRVYDPKITTQRRPVL--KVDIPDVALSCITTTNQSHYVIVGSTT-----------GDMMAVDLRGKGKP 267 (444)
Q Consensus 210 ---------~i~i~d~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~ 267 (444)
.|.+||.. ......+. .+. ....-.+++..|++++++.|+.+ ..+.+||..+ .+-
T Consensus 424 ~~~~~~~~~~v~~yd~~-~~~W~~~~~~~mp-~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t-~~W 500 (656)
T 1k3i_A 424 DSDATTNAHIITLGEPG-TSPNTVFASNGLY-FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ-DTF 500 (656)
T ss_dssp SSBCCCCEEEEECCSTT-SCCEEEECTTCCS-SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG-TEE
T ss_pred CCCcCCcceEEEcCCCC-CCCeeEEccCCCC-CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC-Cce
Confidence 67788877 22221111 111 11222455677899999998754 4689999876 432
Q ss_pred e--eEeccccCceeEEEecCCCCEEEEEEC
Q psy8152 268 C--YKYKGFAGCVKDIACPLNENLILSVSL 295 (444)
Q Consensus 268 ~--~~~~~h~~~i~~~~~s~~~~~l~s~~~ 295 (444)
. ..+...........+.|++++++.|+.
T Consensus 501 ~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 501 YKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 1 111111222234456689999999885
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.76 E-value=3.6e-05 Score=70.95 Aligned_cols=240 Identities=13% Similarity=0.083 Sum_probs=138.9
Q ss_pred CCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEE-EcCCeEEEEeCCCCc----cccceeeccccc
Q psy8152 14 STGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIA-YSGQKIKIYDTDFKN----FNTNTDVSFGEG 88 (444)
Q Consensus 14 ~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~-~~d~~i~vw~~~~~~----~~~~~~~~~~~~ 88 (444)
....|+..++..... ..+. .....+..|+|. +....|+.+ ...+.|+.+++.... ....+.......
T Consensus 90 ~~~~I~~i~l~~~~~-----~~~~--~~~~~~~~l~~d-~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEY-----TSLI--PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp ETTEEEEECTTSCSC-----EEEE--CSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ccceeEEEccCCcce-----eEec--cccCcceEEeee-eccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 346788888776552 1111 335678899999 555555544 456889999886522 222221111122
Q ss_pred cEEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee-C-CCeEEEEEcCCceeeeee
Q psy8152 89 DIVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG-K-ENDLKLWDLNTTKNIFSA 165 (444)
Q Consensus 89 ~v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~i~vwd~~~~~~~~~~ 165 (444)
.-+++.+.+ +++++-...+.|.+.++..................|++.|.+..|+.+. . .+.|...++.........
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 234556644 4555555678899999876554322223445578999999555555443 2 367888887653322222
Q ss_pred ecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC
Q psy8152 166 KNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS 244 (444)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 244 (444)
...-. +.+.|+++|.+..|..+ ...+.|..+++. ....+.+......-.....|++. .+
T Consensus 242 ~~~l~------------------~P~glavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~l~~P~gl~v~-~~ 301 (400)
T 3p5b_L 242 TENIQ------------------WPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVF-ED 301 (400)
T ss_dssp CSSCS------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCCCEEEEECSSTTSSEEEEEEE-TT
T ss_pred ECCCC------------------ceEEEEEEeCCCEEEEEECCCCEEEEEeCC-CCccEEEEeCCCCCCCCEEEEEe-CC
Confidence 11112 57899999877666555 557799999988 22222222211122334567763 44
Q ss_pred CEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEE
Q psy8152 245 HYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIA 282 (444)
Q Consensus 245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~ 282 (444)
.++++-...+.|..++..+ ++.+..+.........++
T Consensus 302 ~lywtd~~~~~V~~~~~~~-G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 302 KVFWTDIINEAIFSANRLT-GSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp EEEEEESSSCSEEEEESSS-CCCCEEEECSCSCEEEEE
T ss_pred EEEEecCCCCeEEEEEcCC-CCceEEEecCCCCCceEE
Confidence 5666677778899999877 777777764444445553
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.75 E-value=5.5e-06 Score=77.17 Aligned_cols=238 Identities=11% Similarity=0.106 Sum_probs=136.6
Q ss_pred ceEEEeeecc-CCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec-CC----cEEEEEcCCC
Q psy8152 44 SVLALNWGNV-EESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK-SG----DVKLWRYKTE 117 (444)
Q Consensus 44 ~v~~~~~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~-dg----~i~iw~~~~~ 117 (444)
....|+++ | +...|+++...+.|+.+++.++....... ......-+++++++++|+++.. .+ .+.+++. .+
T Consensus 138 ~P~~lavd-p~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFD-PKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEE-TTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEEC-CCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 45788999 5 45667766665889999988766544332 2223344667788886666554 22 2333443 33
Q ss_pred Cccc-cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 118 PDQW-TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 118 ~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
.... ...........++++| ++.++++-...+.|..++...+.......... ..+.+.|+|
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-----------------~~~P~gia~ 277 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-----------------SGWEFHIQF 277 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-----------------SSCCEEEEE
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-----------------CCcceeEEE
Confidence 2221 1112234467888999 77777776678899999988655421111111 014788999
Q ss_pred ecCCC-EEEEEeCCceEEEEEcCCCCCcc--ceEEEeCC---------------CCCee-EEEEc--------cCCCEEE
Q psy8152 196 LPNSD-KVAVCSKQGYVRVYDPKITTQRR--PVLKVDIP---------------DVALS-CITTT--------NQSHYVI 248 (444)
Q Consensus 196 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~---------------~~~i~-~~~~~--------~~~~~l~ 248 (444)
+|+++ ++++-...+.|..++.. ..... .+..+.+. -.... .++.. +++.+++
T Consensus 278 ~pdG~~lyv~d~~~~~I~~~~~d-~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyv 356 (430)
T 3tc9_A 278 HPSGNYAYIVVVNQHYILRSDYD-WKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYF 356 (430)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEE-TTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEE
T ss_pred cCCCCEEEEEECCCCEEEEEeCC-cccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEE
Confidence 99998 45555678899998876 11111 11222211 00122 44443 3466666
Q ss_pred EEcCCCcEEEEEcCCCCcceeEeccc------------------cCceeEEEecCC-CCEEEEEECCCcEEEEEcC
Q psy8152 249 VGSTTGDMMAVDLRGKGKPCYKYKGF------------------AGCVKDIACPLN-ENLILSVSLDRHFRVHDFH 305 (444)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~h------------------~~~i~~~~~s~~-~~~l~s~~~dg~i~vw~~~ 305 (444)
+-...+.|+.++. . +... ++.+. -.....|++.|+ +.++++-.....|+.+++.
T Consensus 357 aD~~n~~I~~i~~-~-G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 357 CDRENHCIRILTP-Q-GRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEGGGTEEEEECT-T-SEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECCCcEEEEECC-C-CcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 6666777888873 3 4332 22211 114678889884 5555555556777777653
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.75 E-value=2.8e-05 Score=70.21 Aligned_cols=254 Identities=9% Similarity=-0.048 Sum_probs=146.2
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccc
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQW 121 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~ 121 (444)
...+|.+.. + ..+|+.+.. ..|+..++........+.. .......++.+....|+ +-...+.|+.+++.......
T Consensus 34 d~~~C~~~~-~-~~~ll~~~~-~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 34 DRRSCKALG-P-EPVLLFANR-IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp TSSCEEESS-S-CCEEEEECB-SCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCcccccc-c-CceeEeecc-cceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 345666666 3 345554443 5688888875544333321 11222234455555544 44567889999987665432
Q ss_pred cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC
Q psy8152 122 TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD 200 (444)
Q Consensus 122 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 200 (444)
...........+++.+ .++++++-...+.|.+.++........+..... ....+++.|.+.
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~------------------~P~~iavdp~~g 171 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE------------------KPRAIALHPMEG 171 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCS------------------CEEEEEEETTTT
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCC------------------CcceEEEecCcC
Confidence 2222234467889987 455556666678899999875432222211111 378899998665
Q ss_pred EEE-EEeCC-ceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcceeEeccccC
Q psy8152 201 KVA-VCSKQ-GYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKPCYKYKGFAG 276 (444)
Q Consensus 201 ~l~-~~~~d-~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~h~~ 276 (444)
.|+ +-... +.|..+++. . .....+ ...-.....|+++|++..|+ +-...+.|..+++.. ......+.....
T Consensus 172 ~ly~td~~~~~~I~r~~~d---G-~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~ 246 (349)
T 3v64_C 172 TIYWTDWGNTPRIEASSMD---G-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLP 246 (349)
T ss_dssp EEEEEECSSSCEEEEEETT---S-CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCS
T ss_pred eEEEeccCCCCEEEEEeCC---C-CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC-CceEEEEeCCCC
Confidence 554 44444 788888887 1 122222 22234468999998655554 455667899999874 333323333334
Q ss_pred ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec-CCceeEEEE
Q psy8152 277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM-QSRLTSILV 324 (444)
Q Consensus 277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-~~~i~~~~~ 324 (444)
....+++ ..+.++++-...+.|..++..+++.+..+.. ......+++
T Consensus 247 ~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 247 HPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp SEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 5567777 3455555656678888888777766655542 223344444
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.71 E-value=3.3e-05 Score=70.87 Aligned_cols=252 Identities=9% Similarity=-0.040 Sum_probs=144.5
Q ss_pred EEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCe-EEEEecCCcEEEEEcCCCCcccccc
Q psy8152 46 LALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNF 124 (444)
Q Consensus 46 ~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~ 124 (444)
+|.+.. + ..+|+.+.. ..|+.+++........+.. .....-.++.+.+.. +++-...+.|+.+++..........
T Consensus 80 ~C~~~~-~-~~~l~~~~~-~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 80 SCKALG-P-EPVLLFANR-IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp CEEECS-S-CCEEEEECB-SCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred eECCcc-c-cceeEeecC-ccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 444444 3 344544444 5788888876554443321 112222444554454 4444567889999987665432222
Q ss_pred ccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEE
Q psy8152 125 NVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA 203 (444)
Q Consensus 125 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 203 (444)
........+++.+ .++++++-...+.|.+.++........+..... ....|++.|.+..|+
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~------------------~P~giavdp~~g~ly 217 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE------------------KPRAIALHPMEGTIY 217 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCS------------------CEEEEEEETTTTEEE
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCC------------------CCcEEEEEcCCCeEE
Confidence 2233456788887 455555556677888888765332222211111 478899998776555
Q ss_pred EEe-CC-ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcceeEeccccCceeE
Q psy8152 204 VCS-KQ-GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKD 280 (444)
Q Consensus 204 ~~~-~d-~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~ 280 (444)
.+. .. +.|..+++. ...........-.....|+|+|++..|+ +-+..+.|..+++.. ......+.........
T Consensus 218 ~td~~~~~~I~r~~~d---G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~g 293 (386)
T 3v65_B 218 WTDWGNTPRIEASSMD---GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFA 293 (386)
T ss_dssp EEECSSSCEEEEEETT---SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEE
T ss_pred EeccCCCCEEEEEeCC---CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceE
Confidence 443 34 688888887 2222221222334468999998655554 455667899999864 3333333333345577
Q ss_pred EEecCCCCEEEEEECCCcEEEEEcCCCceEEEeecC-CceeEEEE
Q psy8152 281 IACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYMQ-SRLTSILV 324 (444)
Q Consensus 281 ~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~~-~~i~~~~~ 324 (444)
|++ ..+.++++....+.|..++..+++.+..+... .....+++
T Consensus 294 iav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 294 ITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp EEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 887 34556666667788999987777766665422 33444544
No 272
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.68 E-value=1.5e-06 Score=85.90 Aligned_cols=245 Identities=6% Similarity=-0.049 Sum_probs=134.2
Q ss_pred EEeeeccCCcEEEEEEcCC-----------eEEEEeCCCCccccceeecc-cccc--EEEEEeCCCeEEEEec-CCcEEE
Q psy8152 47 ALNWGNVEESELLIAYSGQ-----------KIKIYDTDFKNFNTNTDVSF-GEGD--IVGVSRYDECILTAVK-SGDVKL 111 (444)
Q Consensus 47 ~~~~~~~~~~~l~~~~~d~-----------~i~vw~~~~~~~~~~~~~~~-~~~~--v~~~s~~~~~l~~~~~-dg~i~i 111 (444)
++++.+.++..++.|+.+. .+.+||..+++.......+. +... ..++..+++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 5566622778888887542 68899998887655433222 1222 2345678999999884 458999
Q ss_pred EEcCCCCcccccc-ccCCCeEEEEEeccCCEEEEee-CC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccc
Q psy8152 112 WRYKTEPDQWTNF-NVGPQLECMKHNKHSNIIATGG-KE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDL 184 (444)
Q Consensus 112 w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (444)
||..+.+...... .....-.+++..+++++++.|+ .+ ..+.+||..+.+-... ..... .|-
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~-------~p~---- 337 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKV-------NPM---- 337 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCS-------GGG----
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCccc-------ccc----
Confidence 9988765442111 1122223456667899999998 34 5689999987653321 10000 000
Q ss_pred cCccceeEEEEecCCCEEEEEeC---------CceEEEEEcCCCCCccceEEEeCC---------CCCeeEEEEcc-CCC
Q psy8152 185 RRPVWVNGISFLPNSDKVAVCSK---------QGYVRVYDPKITTQRRPVLKVDIP---------DVALSCITTTN-QSH 245 (444)
Q Consensus 185 ~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~---------~~~i~~~~~~~-~~~ 245 (444)
.. .-....+..++..++.++. ...+..||.. ...-....... ...-.++.|.. +++
T Consensus 338 ~~--~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~---~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~ 412 (656)
T 1k3i_A 338 LT--ADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTS---GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK 412 (656)
T ss_dssp CC--CCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECS---TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE
T ss_pred cc--ccccceeecCCceEEEECCCCcEEEecCccceeeeecC---CcceeecCCccccccccCCCCCCCceEeccCCCCe
Confidence 00 0000011123333344433 3467888887 22211111111 11223444433 677
Q ss_pred EEEEEcCCC-----------cEEEEEcCCCCcceeEe--ccccCc-eeEEEecCCCCEEEEEECC-----------CcEE
Q psy8152 246 YVIVGSTTG-----------DMMAVDLRGKGKPCYKY--KGFAGC-VKDIACPLNENLILSVSLD-----------RHFR 300 (444)
Q Consensus 246 ~l~~~~~dg-----------~i~iwd~~~~~~~~~~~--~~h~~~-i~~~~~s~~~~~l~s~~~d-----------g~i~ 300 (444)
+++.|+.++ .|.+||..+ ..-.... ..+... -.+++..|++++++.|+.+ ..+.
T Consensus 413 i~v~GG~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~ 491 (656)
T 1k3i_A 413 ILTFGGSPDYQDSDATTNAHIITLGEPGT-SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPE 491 (656)
T ss_dssp EEEECCBSSSSSSBCCCCEEEEECCSTTS-CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCE
T ss_pred EEEEeCCCCCCCCCcCCcceEEEcCCCCC-CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceE
Confidence 888887543 577888776 4433222 112222 2344566899999998864 4689
Q ss_pred EEEcCCCce
Q psy8152 301 VHDFHSKKL 309 (444)
Q Consensus 301 vw~~~~~~~ 309 (444)
+||..+.+-
T Consensus 492 ~ydp~t~~W 500 (656)
T 1k3i_A 492 IYVPEQDTF 500 (656)
T ss_dssp EEEGGGTEE
T ss_pred EEcCCCCce
Confidence 999877654
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.65 E-value=2.4e-05 Score=72.85 Aligned_cols=241 Identities=9% Similarity=0.012 Sum_probs=138.2
Q ss_pred cceEEEeeeccC--CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC---C-cEEEEEcCC
Q psy8152 43 ASVLALNWGNVE--ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS---G-DVKLWRYKT 116 (444)
Q Consensus 43 ~~v~~~~~~~~~--~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d---g-~i~iw~~~~ 116 (444)
.....|+|. ++ ...|+.+...+.|+.++..++....... ......-++++++++++++.... . .+...+...
T Consensus 139 ~~P~gvavd-~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFD-PNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEEC-TTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEc-cccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 356789999 53 4556655544899999987777655432 22233445667888844443321 1 133333222
Q ss_pred CCccccccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 117 EPDQWTNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 117 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
+...............++++| ++.++++-...+.|+.++..++.....+..... ..+...|+|
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~----------------~~~~~~ia~ 280 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT----------------KGSNFHIVW 280 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC----------------CSSCEEEEE
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC----------------CCCcccEEE
Confidence 211101122334456789999 676666666778899999886655222211111 012457999
Q ss_pred ecCCCE-EEEEeCCceEEEEEcCCCCCc--cceEEEeCC---------------CCCeeEEEE---------ccCCCEEE
Q psy8152 196 LPNSDK-VAVCSKQGYVRVYDPKITTQR--RPVLKVDIP---------------DVALSCITT---------TNQSHYVI 248 (444)
Q Consensus 196 ~~~~~~-l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~---------------~~~i~~~~~---------~~~~~~l~ 248 (444)
+|++++ +++-...+.|+.++.. .... .....+.+. -.....+++ .+++.+++
T Consensus 281 dpdG~~LYvad~~~~~I~~~~~d-~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyv 359 (433)
T 4hw6_A 281 HPTGDWAYIIYNGKHCIYRVDYN-RETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYF 359 (433)
T ss_dssp CTTSSEEEEEETTTTEEEEEEBC-TTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEE
T ss_pred eCCCCEEEEEeCCCCEEEEEeCC-CCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEE
Confidence 999984 4555667899998876 1111 111122111 123466888 67787777
Q ss_pred EEcCCCcEEEEEcCCCCcceeEeccc------------------cCceeEEEec-CCCCEEEEEECCCcEEEEEcC
Q psy8152 249 VGSTTGDMMAVDLRGKGKPCYKYKGF------------------AGCVKDIACP-LNENLILSVSLDRHFRVHDFH 305 (444)
Q Consensus 249 ~~~~dg~i~iwd~~~~~~~~~~~~~h------------------~~~i~~~~~s-~~~~~l~s~~~dg~i~vw~~~ 305 (444)
+-...+.|+.++. . +. +.++.+. -.....|+++ +++.++++-...+.|+.+++.
T Consensus 360 aD~~n~~I~~~~~-~-G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 360 CDRDSHTVRVLTP-E-GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EETTTTEEEEECT-T-SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECCCCEEEEECC-C-CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 7777888999884 3 53 3333221 1235678888 555555555556677776653
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.64 E-value=0.00016 Score=64.33 Aligned_cols=231 Identities=9% Similarity=-0.055 Sum_probs=134.5
Q ss_pred EEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeE-EEEecCCcEEEEEcCCC---Ccccccc-ccCCCeE
Q psy8152 57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTE---PDQWTNF-NVGPQLE 131 (444)
Q Consensus 57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~---~~~~~~~-~~~~~v~ 131 (444)
+|+.+.. ..|+..++.+......+.. .....-..+.+.++.| ++-...+.|+.+++... .....+. .......
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3444444 5688889887665544321 1122223445555544 44455688999998751 2221122 2223467
Q ss_pred EEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-C-
Q psy8152 132 CMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-Q- 208 (444)
Q Consensus 132 ~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d- 208 (444)
.+++.+ .++++++-...+.|.++++........+..... ....+++.|.+..|+.+.. .
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~------------------~P~~iavdp~~g~ly~~d~~~~ 142 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS------------------KPRAIVVDPVHGFMYWTDWGTP 142 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC------------------CEEEEEEETTTTEEEEEECSSS
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCC------------------CcceEEeCCCCCEEEEEccCCC
Confidence 899987 445555556678999999875432222221111 4789999997765555443 2
Q ss_pred ceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEec---cccCceeEEEe
Q psy8152 209 GYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYK---GFAGCVKDIAC 283 (444)
Q Consensus 209 ~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~---~h~~~i~~~~~ 283 (444)
+.|..+++. +.....+ ...-.....|+++|++..|+. -...+.|..+++.. .....+. ........+++
T Consensus 143 ~~I~~~~~d----G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg--~~~~~~~~~~~~~~~P~giav 216 (316)
T 1ijq_A 143 AKIKKGGLN----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG--GNRKTILEDEKRLAHPFSLAV 216 (316)
T ss_dssp CEEEEEETT----SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEEECTTTTSSEEEEEE
T ss_pred CeEEEEcCC----CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC--CceEEEeecCCccCCcEEEEE
Confidence 688888887 2222222 223345689999987655554 55667899999864 3333332 12234567777
Q ss_pred cCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 284 PLNENLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 284 s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
. .+.++++-...+.|..++..+++.+..+.
T Consensus 217 ~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 217 F-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp E-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred E-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 5 35556666667889999987777666554
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.62 E-value=0.00023 Score=63.23 Aligned_cols=231 Identities=12% Similarity=0.042 Sum_probs=135.7
Q ss_pred CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc-ccccEEEE
Q psy8152 15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF-GEGDIVGV 93 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~ 93 (444)
...|+.+++....... ...+ .....+.++.|.+.++..+++-...+.|+.+++..+.....+...+ ....-.++
T Consensus 12 ~~~I~~i~l~~~~~~~--~~~~---~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glav 86 (318)
T 3sov_A 12 RRDLRLVDATNGKENA--TIVV---GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC 86 (318)
T ss_dssp EEEEEEEETTCTTSCC--EEEE---EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEE
T ss_pred cCeEEEEECCCCceEE--EEEe---cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEE
Confidence 5678999987664110 1111 1234567899994334444455566889999987654322211111 12333566
Q ss_pred EeCCC-eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceeeeeeecccc
Q psy8152 94 SRYDE-CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNIFSAKNVSH 170 (444)
Q Consensus 94 s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~ 170 (444)
.+.+. ++++-...+.|.++++..................+++.|.+..|+.+. ..+.|...++............-.
T Consensus 87 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~ 166 (318)
T 3sov_A 87 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY 166 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred EcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 66444 455555678899999875443322223445678999999555555544 357788888764222111111111
Q ss_pred eeeEeeeCCCcccccCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE
Q psy8152 171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV 249 (444)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 249 (444)
+.+.|+++|++..|. +-+..+.|..+++. ....+.+ +.........+++. .+.++++
T Consensus 167 ------------------~Pnglavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~--~~~~~~~P~glav~-~~~lywt 224 (318)
T 3sov_A 167 ------------------WPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQAV--VKGSLPHPFALTLF-EDILYWT 224 (318)
T ss_dssp ------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEE--ECSCCSCEEEEEEE-TTEEEEE
T ss_pred ------------------CccEEEEeccCCEEEEEECCCCEEEEEcCC-CCceEEE--ecCCCCCceEEEEe-CCEEEEE
Confidence 478999999765555 44567899999988 2222222 22233445677775 3456666
Q ss_pred EcCCCcEEEEEcCCCCcceeEecc
Q psy8152 250 GSTTGDMMAVDLRGKGKPCYKYKG 273 (444)
Q Consensus 250 ~~~dg~i~iwd~~~~~~~~~~~~~ 273 (444)
-...+.|..++..+ ++.+..+..
T Consensus 225 d~~~~~V~~~~~~~-G~~~~~i~~ 247 (318)
T 3sov_A 225 DWSTHSILACNKYT-GEGLREIHS 247 (318)
T ss_dssp ETTTTEEEEEETTT-CCSCEEEEC
T ss_pred ecCCCeEEEEECCC-CCceEEEeC
Confidence 67778899999877 776666653
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.60 E-value=0.00018 Score=63.87 Aligned_cols=232 Identities=10% Similarity=-0.031 Sum_probs=135.7
Q ss_pred EEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeC-CCeEEEEecCCcEEEEEcCCCCcccc-ccccCCCeEE
Q psy8152 57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRY-DECILTAVKSGDVKLWRYKTEPDQWT-NFNVGPQLEC 132 (444)
Q Consensus 57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~v~~ 132 (444)
+|+.+.. ..|+.+++........+...+ .....+ +.+. +.++++-...+.|+.+++........ ....-.....
T Consensus 6 ~ll~~~~-~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYANR-RDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEECE-EEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEcc-CeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 4444433 678899987654222222111 223334 4443 44455555678899999876642211 2222345678
Q ss_pred EEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe--CCc
Q psy8152 133 MKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS--KQG 209 (444)
Q Consensus 133 ~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~ 209 (444)
+++.+ .++++++-...+.|.++++........+..... ....+++.|.+..|+.+. ..+
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~------------------~P~giavdp~~g~ly~td~~~~~ 145 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD------------------QPRAIALDPSSGFMYWTDWGEVP 145 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS------------------SEEEEEEEGGGTEEEEEECSSSC
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCC------------------CccEEEEeCCCCEEEEEecCCCC
Confidence 89987 555556656678899999875332221111111 478999998766665554 357
Q ss_pred eEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEE-EEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCC
Q psy8152 210 YVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVI-VGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNE 287 (444)
Q Consensus 210 ~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~ 287 (444)
.|..+++. + .....+ ...-.....|+++|++..|+ +-+..+.|..+++.. ......+.+.......+++. .+
T Consensus 146 ~I~r~~~d--G--~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~-~~ 219 (318)
T 3sov_A 146 KIERAGMD--G--SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLF-ED 219 (318)
T ss_dssp EEEEEETT--S--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEE-TT
T ss_pred EEEEEEcC--C--CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEe-CC
Confidence 88888887 1 122222 22234468999999655554 455677899999864 32222222233455677775 33
Q ss_pred CEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 288 NLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 288 ~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
.++++-...+.|..++..+++.+..+.
T Consensus 220 ~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 220 ILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEEecCCCeEEEEECCCCCceEEEe
Confidence 455565667889999998887666554
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.58 E-value=4e-05 Score=76.88 Aligned_cols=240 Identities=10% Similarity=0.002 Sum_probs=128.7
Q ss_pred ceEEEeeeccCCcEEEEEEc-CC----eEEEEeCCCC-ccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEE
Q psy8152 44 SVLALNWGNVEESELLIAYS-GQ----KIKIYDTDFK-NFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLW 112 (444)
Q Consensus 44 ~v~~~~~~~~~~~~l~~~~~-d~----~i~vw~~~~~-~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw 112 (444)
.+...+||||++++||.+.. .| .|+++++.++ +.+.. .... ...-..++|+++.|+....+ ..|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 67889999448888875443 22 5999999988 63321 1111 12234578999887777664 357888
Q ss_pred EcCCCCcccc-cc--ccCCCeEEEEEeccCCEEEEeeC---CCeEEEEEcCCce-ee--eeee-cccceeeEeeeCCCcc
Q psy8152 113 RYKTEPDQWT-NF--NVGPQLECMKHNKHSNIIATGGK---ENDLKLWDLNTTK-NI--FSAK-NVSHRVLVYSVKPDEF 182 (444)
Q Consensus 113 ~~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vwd~~~~~-~~--~~~~-~~~~~~~~~~~~~~~~ 182 (444)
++.+++.... +. ........+.|+|++++|+..+. ...|.++|+.++. .. ..+. ....
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~------------ 320 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG------------ 320 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT------------
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC------------
Confidence 8877643211 21 22344678899999998887653 3468888887642 11 2221 1111
Q ss_pred cccCccceeEEEEecCCCEEEEEeCC----ceEEEEEcCCCCCccceEE-EeCCCC--CeeEEEEccCCCEEEEEcCCCc
Q psy8152 183 DLRRPVWVNGISFLPNSDKVAVCSKQ----GYVRVYDPKITTQRRPVLK-VDIPDV--ALSCITTTNQSHYVIVGSTTGD 255 (444)
Q Consensus 183 ~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~l~~~~~dg~ 255 (444)
...++.|+..+.+++....+ ..|..+++. ....... +..+.. .+..+.+. .+.++++...++.
T Consensus 321 ------~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~---~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~ 390 (751)
T 2xe4_A 321 ------VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG---QPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGL 390 (751)
T ss_dssp ------CCEEEEEETTTEEEEEECTTTCTTCEEEEEETT---STTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTE
T ss_pred ------ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC---CcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCE
Confidence 34555555433444444433 366667765 2111122 223333 34455554 2344555666675
Q ss_pred --EEEEEc-------CCCCcceeEecc-ccCceeEEEe----cCCCC-EEEEEECC---CcEEEEEcCCCc
Q psy8152 256 --MMAVDL-------RGKGKPCYKYKG-FAGCVKDIAC----PLNEN-LILSVSLD---RHFRVHDFHSKK 308 (444)
Q Consensus 256 --i~iwd~-------~~~~~~~~~~~~-h~~~i~~~~~----s~~~~-~l~s~~~d---g~i~vw~~~~~~ 308 (444)
|+++++ .. ++.+..+.- ....+..+.+ ++++. ++++.+.. ..++.+++.+++
T Consensus 391 ~~l~~~dl~~~~~~~~~-g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 391 TRIWTMMADSQDGVFKA-GTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp EEEEEEECCTTTSCCCT-TTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred EEEEEEecccccccccC-CccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 555665 33 331444431 1122334433 34554 44444433 357777777654
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.54 E-value=6e-05 Score=64.05 Aligned_cols=203 Identities=9% Similarity=0.126 Sum_probs=123.3
Q ss_pred CcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeeccccccEE--EEEeCCCeEEEEecCCcEEEEEcCC
Q psy8152 40 TNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIV--GVSRYDECILTAVKSGDVKLWRYKT 116 (444)
Q Consensus 40 ~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~--~~s~~~~~l~~~~~dg~i~iw~~~~ 116 (444)
+-...+..++|+ |+++.|+ +...++.|...|.. ++.+..+...+. ...- ++.+++.++++.-.++.+.++++..
T Consensus 24 g~~~~lSGla~~-~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 24 GITNNISSLTWS-AQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp TCCSCEEEEEEE-TTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CcccCcceeEEe-CCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 445679999999 5555554 56778899999988 888877754331 2233 3345666666655677888888765
Q ss_pred CCccc---cc------cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC---ceeeeeeecccceeeEeeeCCCcccc
Q psy8152 117 EPDQW---TN------FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT---TKNIFSAKNVSHRVLVYSVKPDEFDL 184 (444)
Q Consensus 117 ~~~~~---~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (444)
...+. .. .......-.++|.|.++.|+++.......+|.+.. ...+..+.... +. ...
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~-------~~-~~~-- 170 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA-------LQ-RQF-- 170 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH-------HH-HTC--
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh-------hc-ccc--
Confidence 44211 01 12344568999999887777777665556666541 11111110000 00 000
Q ss_pred cCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCC---------CCeeEEEEccCCCEEEEEcCCC
Q psy8152 185 RRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPD---------VALSCITTTNQSHYVIVGSTTG 254 (444)
Q Consensus 185 ~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg 254 (444)
....+.+++++|.. .+++.....+.|.++|.. ++++..+.-.. .....|+|.++|++.++ +.-+
T Consensus 171 -~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~----g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n 244 (255)
T 3qqz_A 171 -TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV----GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN 244 (255)
T ss_dssp -CSSCCCEEEEETTTTEEEEEETTTTEEEEECTT----CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT
T ss_pred -ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC----CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc
Confidence 01136889999976 556666778889999987 33333333221 24578999999985554 6667
Q ss_pred cEEEEEc
Q psy8152 255 DMMAVDL 261 (444)
Q Consensus 255 ~i~iwd~ 261 (444)
.+++|..
T Consensus 245 ~~y~f~~ 251 (255)
T 3qqz_A 245 RFYRFTP 251 (255)
T ss_dssp EEEEEEC
T ss_pred eEEEEEe
Confidence 6776653
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=6.3e-05 Score=70.26 Aligned_cols=246 Identities=11% Similarity=0.072 Sum_probs=136.7
Q ss_pred ceEEEeeeccCCcEEEEEEc-CCeEEEEeCCCCccccceeecc-c--cccEEEE-------EeCCCeEEEEecCC-----
Q psy8152 44 SVLALNWGNVEESELLIAYS-GQKIKIYDTDFKNFNTNTDVSF-G--EGDIVGV-------SRYDECILTAVKSG----- 107 (444)
Q Consensus 44 ~v~~~~~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~~-~--~~~v~~~-------s~~~~~l~~~~~dg----- 107 (444)
....|+|.|.+...|+.+.. .+.|++.|+.++.+........ . ....+++ ++++++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 35688999313555555544 4678899988777665543211 1 2334566 77888666665554
Q ss_pred --cEEEEEcCC-CCccc----cccccCCCeEEEEEec-cCCEEEEeeCCCeEEEEEcC-------Ccee-----------
Q psy8152 108 --DVKLWRYKT-EPDQW----TNFNVGPQLECMKHNK-HSNIIATGGKENDLKLWDLN-------TTKN----------- 161 (444)
Q Consensus 108 --~i~iw~~~~-~~~~~----~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~-------~~~~----------- 161 (444)
.|.+++... +.... ....-......++++| ++.++++-...+.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665333 22210 0111122345788899 56666666678889999987 4432
Q ss_pred eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE-EEEEeCCceEEEEEcCCCCCccc--eEEEeCC---C---
Q psy8152 162 IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK-VAVCSKQGYVRVYDPKITTQRRP--VLKVDIP---D--- 232 (444)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~---~--- 232 (444)
...+..... ..+.+.|+|+|++++ +++-+..+.|+.++.. ...... ...+.+. .
T Consensus 300 ~~~l~~~~~----------------~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d-g~~~~~~~~~~~aG~~g~~G~~ 362 (496)
T 3kya_A 300 FKQLFTIAD----------------PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD-EIKKEFITPYNFVGGYKQSGYR 362 (496)
T ss_dssp EEEEEECSS----------------SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE-TTTTEECCCEEEEEBTTBCCCB
T ss_pred cceeEecCC----------------CCCceEEEEcCCCCEEEEEeCCCCEEEEEecC-CCcceecccEEecCCCCCCccc
Confidence 111100000 125789999999985 4555677899997765 111111 1122111 0
Q ss_pred ---------CCee-EEEEc-------cCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc---------------------
Q psy8152 233 ---------VALS-CITTT-------NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF--------------------- 274 (444)
Q Consensus 233 ---------~~i~-~~~~~-------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h--------------------- 274 (444)
.... .++.. +.+.++++-.....|+.++ .. + .+.++.+.
T Consensus 363 DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~-G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~ 439 (496)
T 3kya_A 363 DDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PE-G-IVSTYAGRGASTSLADGNQWGTDDGDLRE 439 (496)
T ss_dssp CCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TT-C-BEEEEEESCTTHHHHHSCSCCCCCEETTT
T ss_pred CCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CC-C-CEEEEecccccccccCccccccCCCCchh
Confidence 1123 44454 4567777777788899988 34 5 34444322
Q ss_pred ---cCceeEEEecCC-CCEEEEEECCCcEEEEEcCCCce
Q psy8152 275 ---AGCVKDIACPLN-ENLILSVSLDRHFRVHDFHSKKL 309 (444)
Q Consensus 275 ---~~~i~~~~~s~~-~~~l~s~~~dg~i~vw~~~~~~~ 309 (444)
-.....|++.++ +.++++=.....|+.+++.....
T Consensus 440 ~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 440 VARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred hhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 012456777775 55555545566677776655433
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.49 E-value=0.00074 Score=62.11 Aligned_cols=241 Identities=9% Similarity=-0.056 Sum_probs=142.7
Q ss_pred cEEEEEEcCCeEEEEeCCCCccccceeeccccccE--EEEEeCCCeEEEE-ecCCcEEEEEcCCCC----ccccccccCC
Q psy8152 56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDI--VGVSRYDECILTA-VKSGDVKLWRYKTEP----DQWTNFNVGP 128 (444)
Q Consensus 56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v--~~~s~~~~~l~~~-~~dg~i~iw~~~~~~----~~~~~~~~~~ 128 (444)
.+|+.+.. ..|+..++........+. ....+ +++.+.+..|+.+ ...+.|+.+++.... ..........
T Consensus 84 ~~ll~~~~-~~I~~i~l~~~~~~~~~~---~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 84 AYLFFTNR-HEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp CEEEEEET-TEEEEECTTSCSCEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred ceeEEecc-ceeEEEccCCcceeEecc---ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 35555544 789999987665544432 22334 4445545555444 456788888886522 2211222345
Q ss_pred CeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC
Q psy8152 129 QLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK 207 (444)
Q Consensus 129 ~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 207 (444)
....+++.+ .++++++-...+.|.+.++........+..... ....|++.|.+.+|+....
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~------------------~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS------------------KPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC------------------CEEEEEEETTTTEEEEEEC
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC------------------CcceEEEecccCeEEEEeC
Confidence 678899988 555666666678899999876443332221112 3789999997666655442
Q ss_pred --CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEe-cc--ccCceeEE
Q psy8152 208 --QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKY-KG--FAGCVKDI 281 (444)
Q Consensus 208 --d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~-~~--h~~~i~~~ 281 (444)
.+.|...++. .......+...-.....|+++|.+..|+.+ ...+.|..+++.. . ....+ .. ......+|
T Consensus 222 ~~~~~I~~~~~d---G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG-~-~~~~~~~~~~~l~~P~gl 296 (400)
T 3p5b_L 222 GTPAKIKKGGLN---GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSL 296 (400)
T ss_dssp SSSCCEEEEETT---SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-C-CCEEEEECSSTTSSEEEE
T ss_pred CCCCEEEEEeCC---CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC-C-ccEEEEeCCCCCCCCEEE
Confidence 4788888887 222222122333457899999876666554 5567899999864 3 33333 21 22344567
Q ss_pred EecCCCCEEEEEECCCcEEEEEcCCCceEEEeec-CCceeEEEE
Q psy8152 282 ACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM-QSRLTSILV 324 (444)
Q Consensus 282 ~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~-~~~i~~~~~ 324 (444)
++. .+.++++-...+.|..++..+++.+..+.. ......+++
T Consensus 297 ~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 297 AVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 763 345556666778899999888877666652 233455544
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.48 E-value=0.00028 Score=70.49 Aligned_cols=229 Identities=14% Similarity=0.085 Sum_probs=129.6
Q ss_pred CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCc----cccceeecccccc
Q psy8152 15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKN----FNTNTDVSFGEGD 89 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~----~~~~~~~~~~~~~ 89 (444)
...|+..++..... ..+. .....+.+|+|. +....|+ +-...+.|+.+++.... ....+........
T Consensus 403 ~~~Ir~i~l~~~~~-----~~l~--~~~~~~~gl~~d-~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 403 RHEVRKMTLDRSEY-----TSLI--PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp BSSEEEECTTSCCC-----EEEE--CSCSSEEEEEEE-TTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccceeEeeccCCcc-----eeee--cCCCceEEEeec-ccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 34566666655442 1111 234567899999 5444444 54556889988887532 2222211112334
Q ss_pred EEEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee-C-CCeEEEEEcCCceeeeeee
Q psy8152 90 IVGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG-K-ENDLKLWDLNTTKNIFSAK 166 (444)
Q Consensus 90 v~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~i~vwd~~~~~~~~~~~ 166 (444)
-+++.+.++. +++-...+.|.+.++..................|++.|....|+.+. . .+.|...++........+.
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~ 554 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 554 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe
Confidence 4666776654 44555678899999875544322223445688999999655555443 2 3678888886543322222
Q ss_pred cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152 167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH 245 (444)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 245 (444)
.... +.+.|++.+.+..|+.+ ...+.|..+++. ......+..-...-.....|++.. ++
T Consensus 555 ~~l~------------------~P~GLavD~~~~~LYwaD~~~~~I~~~d~d-G~~~~~v~~~~~~l~~P~glav~~-~~ 614 (791)
T 3m0c_C 555 ENIQ------------------WPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFE-DK 614 (791)
T ss_dssp SSCS------------------CEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEET-TE
T ss_pred CCCC------------------CceEEEEecCCCeEEEEeCCCCcEEEEecC-CCceEEEecCCCccCCCCEEEEeC-CE
Confidence 1112 58899999777666555 556789999988 222222221111122344666643 34
Q ss_pred EEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152 246 YVIVGSTTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
++++-...+.|...+..+ ++.+..+.
T Consensus 615 lYwtD~~~~~I~~~dk~t-G~~~~~l~ 640 (791)
T 3m0c_C 615 VFWTDIINEAIFSANRLT-GSDVNLLA 640 (791)
T ss_dssp EEEEETTTTEEEEEETTT-CCCCEEEE
T ss_pred EEEEECCCCEEEEEeCCC-CcceEEee
Confidence 555566678888888777 76665554
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.47 E-value=2.4e-05 Score=78.47 Aligned_cols=193 Identities=9% Similarity=0.035 Sum_probs=109.2
Q ss_pred EEEEE-eCCCeEEEEec-CC----cEEEEEcCCC-CccccccccCCCeEEEEEeccCCEEEEeeCC-----CeEEEEEcC
Q psy8152 90 IVGVS-RYDECILTAVK-SG----DVKLWRYKTE-PDQWTNFNVGPQLECMKHNKHSNIIATGGKE-----NDLKLWDLN 157 (444)
Q Consensus 90 v~~~s-~~~~~l~~~~~-dg----~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~ 157 (444)
...+| |+|++|+.+.. .| +|+++++.++ +.+.... ......++|+|+++.|+....+ ..|.++++.
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~--~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg 255 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV--SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG 255 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE--EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc--cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence 35679 99998776543 33 4999999988 6432111 1123578999999888877665 257778877
Q ss_pred Ccee--eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe---CCceEEEEEcCCCCCccc-eEEEe-C
Q psy8152 158 TTKN--IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS---KQGYVRVYDPKITTQRRP-VLKVD-I 230 (444)
Q Consensus 158 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~-~~~~~-~ 230 (444)
+++. ...+..... .....+.|+|++++|+..+ ....|+++|+. +..... +..+. .
T Consensus 256 t~~~~~~lv~~~~~~-----------------~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~-~~~~~~~~~~l~~~ 317 (751)
T 2xe4_A 256 KLQSEDVCLYEEHNP-----------------LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR-KGNAHNTLEIVRPR 317 (751)
T ss_dssp SCGGGCEEEEECCCT-----------------TCEEEEEECTTSSEEEEEEECSSCEEEEEEESS-SCTTCCCEEESSCC
T ss_pred CCchhcEEEEecCCC-----------------ceEEEEEECCCCCEEEEEecCCCCceEEEEECC-CCCCCceeEEeecC
Confidence 6531 111111111 1356789999998887654 34578888987 221122 12232 2
Q ss_pred CCCCeeEEEEccCCCEEEEEcCC----CcEEEEEcCCCCcceeE-eccccC--ceeEEEecCCCCEEEEEECCCc--EEE
Q psy8152 231 PDVALSCITTTNQSHYVIVGSTT----GDMMAVDLRGKGKPCYK-YKGFAG--CVKDIACPLNENLILSVSLDRH--FRV 301 (444)
Q Consensus 231 ~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~-~~~h~~--~i~~~~~s~~~~~l~s~~~dg~--i~v 301 (444)
......++.|+..+.+++....+ ..|..+++.+ ...... +..|.. .+..+.+. .+.++++...++. |++
T Consensus 318 ~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~-~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 318 EKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ-PSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp CTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS-TTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred CCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC-cccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence 33444555555444444444443 3566677654 222223 333333 34555554 3345666677776 455
Q ss_pred EEc
Q psy8152 302 HDF 304 (444)
Q Consensus 302 w~~ 304 (444)
+++
T Consensus 396 ~dl 398 (751)
T 2xe4_A 396 MMA 398 (751)
T ss_dssp EEC
T ss_pred Eec
Confidence 564
No 283
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.47 E-value=0.00048 Score=71.85 Aligned_cols=309 Identities=11% Similarity=0.035 Sum_probs=167.6
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeecc-----CCcEEEEEEc-CCeEEEEeCCCCcccc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNV-----EESELLIAYS-GQKIKIYDTDFKNFNT 79 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~~l~~~~~-d~~i~vw~~~~~~~~~ 79 (444)
+.++++++ .+.|.++.+..++. ..... ..-...|.|+++.|. ...++++|.. |++|+|+.+.+.+.+.
T Consensus 523 ~~~vvva~-g~~l~~fel~~~~L--~~~~~---~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~ 596 (1158)
T 3ei3_A 523 SSQVVVAV-GRALYYLQIHPQEL--RQISH---TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLH 596 (1158)
T ss_dssp SSEEEEEE-TTEEEEEEEETTEE--EEEEE---EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CCEEEEEE-CCEEEEEEeeCCce--eeecc---cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEE
Confidence 44566664 56777777765542 22222 223568999999842 2478999997 9999999998766554
Q ss_pred ceeeccccccEE--EE-EeC-CCeEEEEecCCcEEEEEcC--CCCccc---cccccCCCeEEEEEeccCCEEEEeeCCCe
Q psy8152 80 NTDVSFGEGDIV--GV-SRY-DECILTAVKSGDVKLWRYK--TEPDQW---TNFNVGPQLECMKHNKHSNIIATGGKEND 150 (444)
Q Consensus 80 ~~~~~~~~~~v~--~~-s~~-~~~l~~~~~dg~i~iw~~~--~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 150 (444)
...+.. ..... .+ ... ..+|..|-.||.+.-+.+. ++.... ...+ ..++.-..+...+..-+.+..+..
T Consensus 597 ~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp 674 (1158)
T 3ei3_A 597 KEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRP 674 (1158)
T ss_dssp EEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSC
T ss_pred EEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCC
Confidence 433322 11222 22 222 3468888899998766654 343322 1222 334444444333332222222344
Q ss_pred EEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE-EEecCC--CEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152 151 LKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI-SFLPNS--DKVAVCSKQGYVRVYDPKITTQRRPVLK 227 (444)
Q Consensus 151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 227 (444)
..+|.-+ ++.... .... ..+.++ .|+... .-++..+ ++.++|..+. ......+.+
T Consensus 675 ~liy~~~-~~l~~s--~l~~-----------------~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~-~~~~~~~~~ 732 (1158)
T 3ei3_A 675 TVIYSSN-HKLVFS--NVNL-----------------KEVNYMCPLNSDGYPDSLALAN-NSTLTIGTID-EIQKLHIRT 732 (1158)
T ss_dssp EEEEESS-SSEEEE--EBSS-----------------SCCCEEEEECCSSSTTEEEEEC-SSCEEEEEEC-CSSSEEEEE
T ss_pred EEEEEcC-CceEEe--ccCh-----------------HHhceEeccCcccCCCcEEEEc-CCceEEEEec-ccCCeeEEE
Confidence 4444433 222211 1111 013223 343322 3444433 4569998886 223344555
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEcCC-------------------------------------------------CcEEE
Q psy8152 228 VDIPDVALSCITTTNQSHYVIVGSTT-------------------------------------------------GDMMA 258 (444)
Q Consensus 228 ~~~~~~~i~~~~~~~~~~~l~~~~~d-------------------------------------------------g~i~i 258 (444)
++-. ..+..++++|..+.++.+..+ +.|++
T Consensus 733 ipL~-~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~l 811 (1158)
T 3ei3_A 733 VPLY-ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLI 811 (1158)
T ss_dssp EECS-SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEE
T ss_pred EeCC-CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEE
Confidence 5543 467889998876655443211 24677
Q ss_pred EEcCCCCcceeEecc-ccCceeEE---EecCC-CCEEEEEE----------CCCcEEEEEcCCCce--EEEeecCCceeE
Q psy8152 259 VDLRGKGKPCYKYKG-FAGCVKDI---ACPLN-ENLILSVS----------LDRHFRVHDFHSKKL--LRKDYMQSRLTS 321 (444)
Q Consensus 259 wd~~~~~~~~~~~~~-h~~~i~~~---~~s~~-~~~l~s~~----------~dg~i~vw~~~~~~~--~~~~~~~~~i~~ 321 (444)
+|..+ .+.+..+.- ....+.++ .|..+ ..+|+.|+ ..|.|++|++..+++ +.+...++.+.+
T Consensus 812 idp~t-~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~a 890 (1158)
T 3ei3_A 812 IDQHT-FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYS 890 (1158)
T ss_dssp EETTT-CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEE
T ss_pred EeCCC-CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEE
Confidence 77777 666655542 22234444 34332 36888886 358899999975443 333446788888
Q ss_pred EEEcCCCcccccchhhhhccccccCCCccccCCCccc
Q psy8152 322 ILVRSDFSLENETKKEEQEHSEEKGDSDEKYDPEHFE 358 (444)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~s~~~d~~i~~W~~~~~~ 358 (444)
++--. ++++++ ....+++|++...+
T Consensus 891 l~~~~----------g~Lla~--ig~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 891 MVEFN----------GKLLAS--INSTVRLYEWTTEK 915 (1158)
T ss_dssp EEEET----------TEEEEE--ETTEEEEEEECTTS
T ss_pred EeeeC----------CEEEEE--cCCEEEEEECCCCc
Confidence 76321 233443 45778999887544
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=6.2e-05 Score=70.04 Aligned_cols=150 Identities=11% Similarity=0.036 Sum_probs=93.4
Q ss_pred EEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-CC----eEEEEEcCCceee-
Q psy8152 90 IVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-EN----DLKLWDLNTTKNI- 162 (444)
Q Consensus 90 v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~vwd~~~~~~~- 162 (444)
-++++| ++..|+++...+.|+.+++..+... .+.........++|++++++|+++.. .+ .+.+++. .+...
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~ 218 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKV 218 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCS
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceee
Confidence 456676 3555665555578999998876544 24445566889999999996665554 22 2333333 22211
Q ss_pred -eeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCceEEEEEcCCCCCccceEEEe-CCCCCeeEEE
Q psy8152 163 -FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-IPDVALSCIT 239 (444)
Q Consensus 163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~~~ 239 (444)
..+.... ....++++| ++.++++-...+.|..|+.. ......... ........|+
T Consensus 219 ~~~l~~~~-------------------~p~giavdp~~g~lyv~d~~~~~V~~~~~~---~~~~~~~~~~~~~~~P~gia 276 (430)
T 3tc9_A 219 ITELTKGQ-------------------NCNGAETHPINGELYFNSWNAGQVFRYDFT---TQETTPLFTIQDSGWEFHIQ 276 (430)
T ss_dssp EEEEEECS-------------------SCCCEEECTTTCCEEEEETTTTEEEEEETT---TTEEEEEEECSSSSCCEEEE
T ss_pred eeeeccCC-------------------CceEEEEeCCCCEEEEEECCCCEEEEEECC---CCcEEEEEEcCCCCcceeEE
Confidence 1121111 367789999 67777777778899999987 332211112 1223467899
Q ss_pred EccCCCEE-EEEcCCCcEEEEEcCC
Q psy8152 240 TTNQSHYV-IVGSTTGDMMAVDLRG 263 (444)
Q Consensus 240 ~~~~~~~l-~~~~~dg~i~iwd~~~ 263 (444)
|+|++++| ++-...+.|+.++...
T Consensus 277 ~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 277 FHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EcCCCCEEEEEECCCCEEEEEeCCc
Confidence 99999954 4556678899988653
No 285
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.45 E-value=0.0004 Score=58.94 Aligned_cols=203 Identities=10% Similarity=0.077 Sum_probs=122.3
Q ss_pred cEEEE--EeCCCe-EEEEecCCcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee
Q psy8152 89 DIVGV--SRYDEC-ILTAVKSGDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS 164 (444)
Q Consensus 89 ~v~~~--s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 164 (444)
.+..+ .|+++. +++...++.|...|+. ++.+..+ ..-....-.+++.+++.++++.-.++.+.++++.....+..
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~ 106 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKI 106 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeee
Confidence 44444 565554 5556778889999987 6655433 22235678889988887766655678899998876432211
Q ss_pred eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe-------CCCCCeeE
Q psy8152 165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-------IPDVALSC 237 (444)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~~i~~ 237 (444)
.....- .+ .....+.....|+|.|.++.|.++.......+|.+..-.....+..+. .+...+.+
T Consensus 107 ~~~~~~-----~~----~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 107 LKKIKI-----PL----QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp EEEEEC-----CC----SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred eeeecc-----cc----ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 111100 00 001123347899999999777776665555555554100111122121 12345789
Q ss_pred EEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEecccc---------CceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 238 ITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFA---------GCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 238 ~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~---------~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
++++|. +++++.......|.++|.. ++++..+.-.. ...-.|+|.++|++.++ +.-..+++|.-
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT--CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCC--CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 999996 5566667778889999976 55665554211 24578999999984444 77776666654
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.45 E-value=0.00019 Score=63.47 Aligned_cols=215 Identities=8% Similarity=0.050 Sum_probs=119.3
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCC--eEEEEeCCCCccccceee
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQ--KIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~~~ 83 (444)
+..+++....+.|..|+..... . ..+. ....+.++++. ++++++++..... .|..++..+++.......
T Consensus 43 g~lyv~d~~~~~I~~~d~~g~~--~---~~~~---~~~~p~gia~~-~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 43 GTIFVTNHEVGEIVSITPDGNQ--Q---IHAT---VEGKVSGLAFT-SNGDLVATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp SCEEEEETTTTEEEEECTTCCE--E---EEEE---CSSEEEEEEEC-TTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CCEEEEeCCCCeEEEECCCCce--E---EEEe---CCCCceeEEEc-CCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 3444444467788777765432 1 1111 23468899999 6888655543322 466777777765443322
Q ss_pred ccccccEEEEE-eCCCe-EEEEecCCcEEEEEcCCCCc-cc---------cccccCCCeEEEEEeccCCEEEE-eeCCCe
Q psy8152 84 SFGEGDIVGVS-RYDEC-ILTAVKSGDVKLWRYKTEPD-QW---------TNFNVGPQLECMKHNKHSNIIAT-GGKEND 150 (444)
Q Consensus 84 ~~~~~~v~~~s-~~~~~-l~~~~~dg~i~iw~~~~~~~-~~---------~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~ 150 (444)
.. ......+. ..+.. +++-...+.|++++..+++. +. .....-.....+ +|+++.|+. -...+.
T Consensus 114 ~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~ 190 (306)
T 2p4o_A 114 PD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKML 190 (306)
T ss_dssp TT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTE
T ss_pred CC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCE
Confidence 11 11112221 23334 44444578888888765421 10 001111234555 777765554 455788
Q ss_pred EEEEEcCC-cee--eeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152 151 LKLWDLNT-TKN--IFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK 227 (444)
Q Consensus 151 i~vwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 227 (444)
|..|++.. ++. ...+... . ....+++.++|+++++....+.|.+++.. +....+..
T Consensus 191 I~~~~~~~~g~~~~~~~~~~~-~------------------~P~gi~vd~dG~l~va~~~~~~V~~~~~~--G~~~~~~~ 249 (306)
T 2p4o_A 191 LLRIPVDSTDKPGEPEIFVEQ-T------------------NIDDFAFDVEGNLYGATHIYNSVVRIAPD--RSTTIIAQ 249 (306)
T ss_dssp EEEEEBCTTSCBCCCEEEEES-C------------------CCSSEEEBTTCCEEEECBTTCCEEEECTT--CCEEEEEC
T ss_pred EEEEEeCCCCCCCccEEEecc-C------------------CCCCeEECCCCCEEEEeCCCCeEEEECCC--CCEEEEee
Confidence 99999875 321 0111000 0 25678999999888877778899999876 11111222
Q ss_pred EeCCCCCeeEEEEc---cCCCEEEEEcCC
Q psy8152 228 VDIPDVALSCITTT---NQSHYVIVGSTT 253 (444)
Q Consensus 228 ~~~~~~~i~~~~~~---~~~~~l~~~~~d 253 (444)
+.......++++|. |+++.|++++..
T Consensus 250 ~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 250 AEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp GGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cccccCCceEEEEecccCCCCEEEEECCC
Confidence 33333557899998 887777765543
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.44 E-value=0.00077 Score=60.15 Aligned_cols=271 Identities=11% Similarity=0.014 Sum_probs=141.4
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee--ccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCc
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV--SFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPD 119 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~--~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 119 (444)
...+.+|.|. +.+..++ ++..|.|. .....++.-..... ......+.++..+++.++.++..+.|.. ....++.
T Consensus 35 ~~~~~~v~~~-~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 35 TATILDMSFI-DRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SSCEEEEEES-SSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSS
T ss_pred CCcEEEEEEC-CCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCC
Confidence 4578999998 4555666 45567653 33333432111111 1123355565544455555566665433 2233332
Q ss_pred ccccc---ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeee-cccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 120 QWTNF---NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAK-NVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 120 ~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
-.... .+...+..+.+.+++..++.+. .+.|.. ....++.-.... ... ..+..+++
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~~~~~~~~------------------~~~~~~~~ 170 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQALVQEAI------------------GVMRNLNR 170 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEEEEECSCC------------------CCEEEEEE
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCEEeecCCC------------------cceEEEEE
Confidence 21111 2334577888777666666554 454322 112232221111 111 14788999
Q ss_pred ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-c-
Q psy8152 196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-G- 273 (444)
Q Consensus 196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~- 273 (444)
.|++.+++++...+..+-.|-. ......+. ......+..+.+.+++++++++ .+|.+++..... ++....+. .
T Consensus 171 ~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~-G~tW~~~~~~~ 245 (327)
T 2xbg_A 171 SPSGEYVAVSSRGSFYSTWEPG-QTAWEPHN--RTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDN-SENWGELLSPL 245 (327)
T ss_dssp CTTSCEEEEETTSSEEEEECTT-CSSCEEEE--CCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTE-EEEECCCBCTT
T ss_pred cCCCcEEEEECCCcEEEEeCCC-CCceeECC--CCCCCccceeEECCCCCEEEEe-CCceEEEecCCC-CCeeEeccCCc
Confidence 9988888776554444444431 11333332 2345568889999988766554 578777764222 22222221 1
Q ss_pred --ccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee----cCCceeEEEEcCCCcccccchhhhhccccccCC
Q psy8152 274 --FAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY----MQSRLTSILVRSDFSLENETKKEEQEHSEEKGD 347 (444)
Q Consensus 274 --h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~ 347 (444)
+...+.++++.+++.+++++ .+|.| ++....++.-..+. ....+.++.|... ..++.++.+|
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~----------~~~~~~G~~G 313 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP----------DQGFILGQKG 313 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET----------TEEEEECSTT
T ss_pred ccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC----------CceEEEcCCc
Confidence 22358889998877766654 56766 44555555433333 2345777777422 2344556677
Q ss_pred CccccC
Q psy8152 348 SDEKYD 353 (444)
Q Consensus 348 ~i~~W~ 353 (444)
.|..++
T Consensus 314 ~i~~~~ 319 (327)
T 2xbg_A 314 ILLRYV 319 (327)
T ss_dssp EEEEEC
T ss_pred eEEEEc
Confidence 665444
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.41 E-value=0.00015 Score=63.93 Aligned_cols=204 Identities=10% Similarity=0.146 Sum_probs=127.3
Q ss_pred CCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEecc----CC---EEEE-eeC--CCeEEEEEcCC-ceeeee
Q psy8152 96 YDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKH----SN---IIAT-GGK--ENDLKLWDLNT-TKNIFS 164 (444)
Q Consensus 96 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~-~~~--d~~i~vwd~~~-~~~~~~ 164 (444)
...+++.....+-+.+||+ +++.+..+. .+.++.+..-|. ++ ++++ .-. +++|.+|++.. ...+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEcc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3456666677889999999 677775332 256777777662 22 2233 333 57899997742 222333
Q ss_pred eecccceeeEeeeCCCcccccCccceeEEEE--ecC-CC-EEEEEeCCceEEEEEcCCC----CCccceEEEeCCCCCee
Q psy8152 165 AKNVSHRVLVYSVKPDEFDLRRPVWVNGISF--LPN-SD-KVAVCSKQGYVRVYDPKIT----TQRRPVLKVDIPDVALS 236 (444)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~~-~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~~~~i~ 236 (444)
+......+ . . ....+..+|+ +|. +. ++++...+|.+..|++... ...+.+.+|... ..+.
T Consensus 116 i~~~~~pv---~---t-----~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~E 183 (355)
T 3amr_A 116 MTDPDHPI---A---T-----AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTE 183 (355)
T ss_dssp CSCTTSCE---E---C-----CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEE
T ss_pred ccccccCc---C---C-----CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcc
Confidence 31110000 0 0 0014667777 664 33 6888888999999998511 134566777654 4578
Q ss_pred EEEEccCCCEEEEEcCCCcEEEEEcCCC----CcceeEec-cc-cCceeEEEe--cCCCC-EEEEEE-CCCcEEEEEcC-
Q psy8152 237 CITTTNQSHYVIVGSTTGDMMAVDLRGK----GKPCYKYK-GF-AGCVKDIAC--PLNEN-LILSVS-LDRHFRVHDFH- 305 (444)
Q Consensus 237 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~-~h-~~~i~~~~~--s~~~~-~l~s~~-~dg~i~vw~~~- 305 (444)
.+...+...+|+.+-.+.-|..++.... ++.+..+. ++ ...+..|++ .++++ +|++++ .+.++.||+..
T Consensus 184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred eEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 8889888889999988876766675520 34554443 22 346788887 45555 666666 56799999997
Q ss_pred CCceEEEee
Q psy8152 306 SKKLLRKDY 314 (444)
Q Consensus 306 ~~~~~~~~~ 314 (444)
+.+.+..+.
T Consensus 264 ~~~~vg~f~ 272 (355)
T 3amr_A 264 KNKYVADFR 272 (355)
T ss_dssp TCCEEEEEE
T ss_pred CCcEEEEEE
Confidence 667776664
No 289
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.38 E-value=0.0012 Score=64.33 Aligned_cols=232 Identities=7% Similarity=0.018 Sum_probs=136.8
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEE-EEEcCCeEEEEeCCCCccccceeecc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELL-IAYSGQKIKIYDTDFKNFNTNTDVSF 85 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~ 85 (444)
.+|+.+ ..+.|+..++..... .....+ ..-..+..|+|. +....|+ +-...+.|+.+++........+....
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~--~~~~~~---~~~~~~~~l~~d-~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~ 79 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNN--NVAIPL---TGVKEASALDFD-VTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL 79 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTC--EEECCC---CSCSCEEEEEEE-TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred cEEEEE-eCCcEEEEECCCCCc--ceEEEc---CCCCceEEEEEE-CCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC
Confidence 344443 567899999986552 111111 223567899999 5555555 44557899999987554433332111
Q ss_pred ccccEEEEEeCCCeE-EEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee--CCCeEEEEEcCCceee
Q psy8152 86 GEGDIVGVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG--KENDLKLWDLNTTKNI 162 (444)
Q Consensus 86 ~~~~v~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~ 162 (444)
....-+++.+.+..| ++-...+.|.+.++............-.....+++.|....|+.+. ..+.|...++......
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 233345666655544 5545567899999875543321223445678999999544555443 2567777777653322
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEc
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTT 241 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 241 (444)
..... .. +...|++.+.++.|..+ ...+.|..+++. ....+ + +.........+++.
T Consensus 160 ~l~~~-~~------------------~P~GlalD~~~~~LY~aD~~~~~I~~~d~d-G~~~~-v--~~~~l~~P~glav~ 216 (628)
T 4a0p_A 160 TLVPN-VG------------------RANGLTIDYAKRRLYWTDLDTNLIESSNML-GLNRE-V--IADDLPHPFGLTQY 216 (628)
T ss_dssp EEECS-CS------------------SEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCE-E--EEECCSCEEEEEEE
T ss_pred EEECC-CC------------------CcceEEEccccCEEEEEECCCCEEEEEcCC-CCceE-E--eeccCCCceEEEEE
Confidence 22221 12 58899999977655544 567899999998 22222 2 22222334577776
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCCcceeE
Q psy8152 242 NQSHYVIVGSTTGDMMAVDLRGKGKPCYK 270 (444)
Q Consensus 242 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 270 (444)
. +.++++-...+.|...|..+ ++....
T Consensus 217 ~-~~ly~tD~~~~~I~~~dk~t-g~~~~~ 243 (628)
T 4a0p_A 217 Q-DYIYWTDWSRRSIERANKTS-GQNRTI 243 (628)
T ss_dssp T-TEEEEEETTTTEEEEEETTT-CCSCEE
T ss_pred C-CEEEEecCCCCEEEEEECCC-CCceEE
Confidence 4 45556666678898888766 544333
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.38 E-value=2.4e-06 Score=84.66 Aligned_cols=240 Identities=14% Similarity=0.068 Sum_probs=129.9
Q ss_pred CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEE-EcCCeEEEEeCCC----Cccccceeecccccc
Q psy8152 15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIA-YSGQKIKIYDTDF----KNFNTNTDVSFGEGD 89 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~-~~d~~i~vw~~~~----~~~~~~~~~~~~~~~ 89 (444)
.+.|+..++..... ..+. .....+..|+|. +....|+.+ ...+.|+.+++.+ ......+........
T Consensus 385 ~~~I~~id~~~~~~-----~~~~--~~~~~p~gla~d-~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~ 456 (699)
T 1n7d_A 385 RHEVRKMTLDRSEY-----TSLI--PNLRNVVALDTE-VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 456 (699)
T ss_dssp TTC-CEECTTSCCE-----ECCS--CCCTTCCCCEEE-TTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC
T ss_pred ccceEEEeCCCCcc-----eeee--ccCcceEEEccc-cccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc
Confidence 34677777665542 1111 223456789999 556666655 4457899999875 222222210011122
Q ss_pred EEEEEeCC-CeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEee-CC-CeEEEEEcCCceeeeeee
Q psy8152 90 IVGVSRYD-ECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGG-KE-NDLKLWDLNTTKNIFSAK 166 (444)
Q Consensus 90 v~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~vwd~~~~~~~~~~~ 166 (444)
-+++.+.+ +++++-...+.|.++++..................+++.|.+.+|+.+. .. +.|.++++........+.
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 24555444 4455545678899999876543322222234567889998544444433 22 677777765322111111
Q ss_pred cccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCC
Q psy8152 167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSH 245 (444)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 245 (444)
... .+.+.|+|+|++ .++++-+..+.|..+++. ....+.+............|++..+ .
T Consensus 537 ~~l------------------~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~~~~P~glavd~~-~ 596 (699)
T 1n7d_A 537 ENI------------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFED-K 596 (699)
T ss_dssp SSC------------------SSCCCEEECTTTCCEEEEETTTTEEEEECSS-SSCCEEECCCSSSCSSCCCCEEETT-E
T ss_pred CCC------------------CCccEEEEeccCCEEEEEecCCCeEEEEccC-CCceEEEEecCCcCCCceEeEEECC-E
Confidence 111 146789999876 555555667899999987 2222222211111223445666544 4
Q ss_pred EEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEe
Q psy8152 246 YVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIAC 283 (444)
Q Consensus 246 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~ 283 (444)
++++....+.|..++..+ ++.+..+.......+.|++
T Consensus 597 lywtd~~~~~V~~~d~~~-G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 597 VFWTDIINEAIFSANRLT-GSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp EEEECSTTTCEEEEETTT-EEEEECCCTTCSSCCCCCB
T ss_pred EEEEeCCCCeEEEEEccC-CCceEEeecCCCCCcEEEE
Confidence 555666778899999887 7777766533333444443
No 291
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.32 E-value=0.00012 Score=64.59 Aligned_cols=230 Identities=14% Similarity=0.113 Sum_probs=117.3
Q ss_pred CcEEEEEE-cC-----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCC---cc
Q psy8152 55 ESELLIAY-SG-----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEP---DQ 120 (444)
Q Consensus 55 ~~~l~~~~-~d-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~---~~ 120 (444)
+..++.|+ .+ ..+.+||+.+.+....-..+........+..++.+++.|+.+ ..+.+||+.+.+ ..
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~ 94 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWY 94 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCE
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeE
Confidence 45666666 32 478899988766443322222122223334567777777754 468899988776 33
Q ss_pred ccc-cccCCCeEEEEEeccCCEEEEeeCC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 121 WTN-FNVGPQLECMKHNKHSNIIATGGKE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 121 ~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
... ......-.+++. .++.+++.|+.+ ..+.+||+.+.+-...-..... . .-.+++
T Consensus 95 ~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----------------r-~~~~~~ 156 (301)
T 2vpj_A 95 SVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA----------------R-EGAGLV 156 (301)
T ss_dssp EECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC----------------C-BSCEEE
T ss_pred ECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC----------------c-ccceEE
Confidence 210 111111112222 267777777754 3578888877543221111111 0 111222
Q ss_pred EecCCCEEEEEeCC-----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCCC
Q psy8152 195 FLPNSDKVAVCSKQ-----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRGK 264 (444)
Q Consensus 195 ~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 264 (444)
. -++++++.|+.+ ..+.+||+. +.....+..+.........+.+ ++++++.|+.+ ..+.+||+.+
T Consensus 157 ~-~~~~iyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~- 231 (301)
T 2vpj_A 157 V-ASGVIYCLGGYDGLNILNSVEKYDPH-TGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRT- 231 (301)
T ss_dssp E-ETTEEEEECCBCSSCBCCCEEEEETT-TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-
T ss_pred E-ECCEEEEECCCCCCcccceEEEEeCC-CCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCC-
Confidence 2 256777777654 468899987 2333333222211111222222 56777777764 4689999987
Q ss_pred Cccee--EeccccCceeEEEecCCCCEEEEEECC-----CcEEEEEcCCCce
Q psy8152 265 GKPCY--KYKGFAGCVKDIACPLNENLILSVSLD-----RHFRVHDFHSKKL 309 (444)
Q Consensus 265 ~~~~~--~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~~~~ 309 (444)
.+-.. .+.........+.+ ++++++.|+.+ ..|.+||+.+.+-
T Consensus 232 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 232 DSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 43221 12111111122222 56677777655 3577888877543
No 292
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.32 E-value=0.00015 Score=64.00 Aligned_cols=230 Identities=10% Similarity=0.079 Sum_probs=117.3
Q ss_pred CcccEEEec-CC-----CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-----CeEEEEeCC
Q psy8152 5 DDYNIYIGS-ST-----GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-----QKIKIYDTD 73 (444)
Q Consensus 5 ~~~~l~~g~-~d-----g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-----~~i~vw~~~ 73 (444)
++..++.|+ .+ ..+.+|++.+.+- ..+..+.....-.+++.. ++..++.|+.+ ..+.+||+.
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~ 86 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEW-----SFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYT 86 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEE-----EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeE-----EeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECC
Confidence 345677777 33 3688888877662 222222111111223333 46677777754 468999988
Q ss_pred CCc---cccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEE
Q psy8152 74 FKN---FNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIAT 144 (444)
Q Consensus 74 ~~~---~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~ 144 (444)
+.+ ....-..+.......+...++.+++.|+.+ ..+.+||+.+.+..... ......-.+++. .++++++.
T Consensus 87 ~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~ 165 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCL 165 (301)
T ss_dssp CCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEE
T ss_pred CCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEE
Confidence 776 433322222122222333467777777654 35888888776543211 111111112222 26777788
Q ss_pred eeCC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEE
Q psy8152 145 GGKE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVY 214 (444)
Q Consensus 145 ~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~ 214 (444)
|+.+ ..+.+||+.+.+-...-..... . .-.+++. -++++++.|+.+ ..+.+|
T Consensus 166 GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~y 227 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTGHWTNVTPMATK----------------R-SGAGVAL-LNDHIYVVGGFDGTAHLSSVEAY 227 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEEECCCSSC----------------C-BSCEEEE-ETTEEEEECCBCSSSBCCCEEEE
T ss_pred CCCCCCcccceEEEEeCCCCcEEeCCCCCcc----------------c-ccceEEE-ECCEEEEEeCCCCCcccceEEEE
Confidence 7754 4578888877543322110000 0 1112222 256777777664 468999
Q ss_pred EcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152 215 DPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG 263 (444)
Q Consensus 215 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 263 (444)
|+. +.....+..+.........+.+ ++++++.|+.+ ..|.+||+.+
T Consensus 228 d~~-~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 228 NIR-TDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp ETT-TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred eCC-CCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCC
Confidence 988 3333333222221111222222 66777777765 3577888776
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.30 E-value=0.0018 Score=57.78 Aligned_cols=228 Identities=8% Similarity=0.018 Sum_probs=120.1
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec-cccccEEEEE--eCCCeEEEEecCCcEEEEEcCCCC
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS-FGEGDIVGVS--RYDECILTAVKSGDVKLWRYKTEP 118 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~-~~~~~v~~~s--~~~~~l~~~~~dg~i~iw~~~~~~ 118 (444)
...+.+|.|. + +..+ .++..+.|+. ....++.-...... .+...+..+. +++..++ ++..+.|.. ....++
T Consensus 79 ~~~~~~i~~~-~-~~~~-~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQ-G-NEGW-IVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEM-ITNVGAIYR-TKDSGK 152 (327)
T ss_dssp CCEEEEEEEE-T-TEEE-EEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEE-EETTCCEEE-ESSTTS
T ss_pred CccEEEEEec-C-CeEE-EEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEE-EeCCccEEE-EcCCCC
Confidence 4578899998 4 4444 4455565544 22333322222111 1122344443 4454454 445565422 122232
Q ss_pred ccc-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEc--CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 119 DQW-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDL--NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 119 ~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
.-. ........+..+++.+++.+++.+...+..+-+|- .+-+.+. . ... ..+..+.+
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~-~~~------------------~~~~~~~~ 212 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-R-TTS------------------RRLHNMGF 212 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-C-CSS------------------SCEEEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-C-CCC------------------CccceeEE
Confidence 221 12234567889999998887777654433333332 1112221 1 111 14788889
Q ss_pred ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe----CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEe
Q psy8152 196 LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD----IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKY 271 (444)
Q Consensus 196 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 271 (444)
.+++.+++ ++.+|.+++.... ....-..+. .....+..+++.+++.+++++. +|.| ++.... ++.-..+
T Consensus 213 ~~~g~~~~-~~~~G~~~~s~~D---~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~Dg-G~tW~~~ 285 (327)
T 2xbg_A 213 TPDGRLWM-IVNGGKIAFSDPD---NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDG-GQTWQQD 285 (327)
T ss_dssp CTTSCEEE-EETTTEEEEEETT---EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESST-TSSCEEC
T ss_pred CCCCCEEE-EeCCceEEEecCC---CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCC-CcccEEc
Confidence 88887654 4567887776422 111111111 1223578899998877776664 6666 344444 5444444
Q ss_pred c---cccCceeEEEecCCCCEEEEEECCCcEEEEE
Q psy8152 272 K---GFAGCVKDIACPLNENLILSVSLDRHFRVHD 303 (444)
Q Consensus 272 ~---~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~ 303 (444)
. .+...+.++.|.+++ .+++++.+|.|.-++
T Consensus 286 ~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 286 VDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp GGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred CccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 3 234567888887544 466777888776665
No 294
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.29 E-value=0.00023 Score=62.91 Aligned_cols=229 Identities=13% Similarity=0.127 Sum_probs=118.9
Q ss_pred cccEEEecC--CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC----CeEEEEeCCCCcccc
Q psy8152 6 DYNIYIGSS--TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG----QKIKIYDTDFKNFNT 79 (444)
Q Consensus 6 ~~~l~~g~~--dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d----~~i~vw~~~~~~~~~ 79 (444)
+..++.|+. ...+.+||..+.+- ..+..+.....-.+++.. ++..++.|+.+ ..+.+||+.+.+...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSW-----TDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEE-----EECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCE-----ecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEE
Confidence 456777765 35788888887762 222222111111222222 46677777754 678899988776544
Q ss_pred ceeeccccccEEEEEeCCCeEEEEecC------CcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEEeeC-----
Q psy8152 80 NTDVSFGEGDIVGVSRYDECILTAVKS------GDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIATGGK----- 147 (444)
Q Consensus 80 ~~~~~~~~~~v~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~----- 147 (444)
.-..+.......+...++++++.|+.+ ..+.+||+.+.+....- ......-.+++. .++++++.|+.
T Consensus 85 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 85 KLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNV 163 (306)
T ss_dssp EECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTT
T ss_pred CCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCC
Confidence 322222122223334467777777765 45888998876543210 111111112222 26677777764
Q ss_pred ----CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEcCC
Q psy8152 148 ----ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDPKI 218 (444)
Q Consensus 148 ----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~ 218 (444)
-..+.+||+.+.+-...- .... +..-.+++.. ++++++.|+.+ ..+.+||+.
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~-~~p~----------------~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~- 224 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELC-PMIE----------------ARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIK- 224 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEEC-CCSS----------------CCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETT-
T ss_pred cccccceEEEeCCCCCeEEECC-Cccc----------------hhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCC-
Confidence 345788888876432211 1110 0011222222 55677777653 368899988
Q ss_pred CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152 219 TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG 263 (444)
Q Consensus 219 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 263 (444)
......+..+........++.+ ++++++.|+.+ ..+.+||+.+
T Consensus 225 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 225 LNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 3333333222222222233333 66777778754 4578888876
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.28 E-value=0.00059 Score=63.44 Aligned_cols=237 Identities=11% Similarity=0.017 Sum_probs=127.5
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCC-----eEEEEeCCCCccc--
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQ-----KIKIYDTDFKNFN-- 78 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~-----~i~vw~~~~~~~~-- 78 (444)
...|+++...+.|+.+++.++.. ..+. .......+|+|+ ++++ |+.+...+ .+...+.. +...
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v-----~~~~--~~~~~P~giavd-~dG~-lyVad~~~~~~~~gv~~~~~~-~~~~~~ 221 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYV-----DIKT--TNIGQCADVNFT-LNGD-MVVVDDQSSDTNTGIYLFTRA-SGFTER 221 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEE-----EEEC--CCCSCEEEEEEC-TTCC-EEEEECCSCTTSEEEEEECGG-GTTCCE
T ss_pred CCEEEEEeCCCCEEEEECCCCEE-----EEee--cCCCCccEEEEC-CCCC-EEEEcCCCCcccceEEEEECC-CCeecc
Confidence 35566665557888888776652 2221 234568899999 7888 55444321 23333322 2221
Q ss_pred cceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCCCccccccc--cCCCeEEEEEeccCCEEE-EeeCCCeEEEE
Q psy8152 79 TNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHSNIIA-TGGKENDLKLW 154 (444)
Q Consensus 79 ~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw 154 (444)
..+. ......-.++.+ ++.++++-..++.|+.++..++.....+.. ....-..++|+|+++.|+ +-...+.|+.+
T Consensus 222 ~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~ 300 (433)
T 4hw6_A 222 LSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRV 300 (433)
T ss_dssp EEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 1111 111222345667 555555555678899999886765222222 122234799999998554 44557889998
Q ss_pred EcCC--cee--eeeeecccceeeEeeeCCCcc-cccCccceeEEEE---------ecCCCEEEEEeCCceEEEEEcCCCC
Q psy8152 155 DLNT--TKN--IFSAKNVSHRVLVYSVKPDEF-DLRRPVWVNGISF---------LPNSDKVAVCSKQGYVRVYDPKITT 220 (444)
Q Consensus 155 d~~~--~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~---------~~~~~~l~~~~~d~~i~i~d~~~~~ 220 (444)
++.. +.. ...+.+..... .+ +++. ....-.....+++ .+++.++++-...+.|+.++..
T Consensus 301 ~~d~~~~~~~~~~~~ag~~g~~---g~-~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~--- 373 (433)
T 4hw6_A 301 DYNRETGKLAVPYIVCGQHSSP---GW-VDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE--- 373 (433)
T ss_dssp EBCTTTCCBCCCEEEEECTTCC---CC-BCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT---
T ss_pred eCCCCCcccCcEEEEEecCCCC---cc-CCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC---
Confidence 8753 221 11111110000 00 0000 0000113677898 6666777777778899999855
Q ss_pred CccceEEEeCC------------------CCCeeEEEEc-cCCCEEEEEcCCCcEEEEEcC
Q psy8152 221 QRRPVLKVDIP------------------DVALSCITTT-NQSHYVIVGSTTGDMMAVDLR 262 (444)
Q Consensus 221 ~~~~~~~~~~~------------------~~~i~~~~~~-~~~~~l~~~~~dg~i~iwd~~ 262 (444)
+ .+.++.+. -.....|+++ +++.++++-..++.|+.+++.
T Consensus 374 -G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 374 -G-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp -S-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -C-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 2 22222221 1225678888 567666666667778877754
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.23 E-value=0.0022 Score=64.07 Aligned_cols=230 Identities=8% Similarity=-0.064 Sum_probs=131.1
Q ss_pred EEEEEEcCCeEEEEeCCCCccccceeeccccccEEE--EEeCCCe-EEEEecCCcEEEEEcCCC----CccccccccCCC
Q psy8152 57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVG--VSRYDEC-ILTAVKSGDVKLWRYKTE----PDQWTNFNVGPQ 129 (444)
Q Consensus 57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~--~s~~~~~-l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~ 129 (444)
+|+.+.. ..|+..++........+. ....+.+ +.+.... +++-...+.|+.+++... .....+......
T Consensus 397 ~Ll~an~-~~Ir~i~l~~~~~~~l~~---~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~ 472 (791)
T 3m0c_C 397 YLFFTNR-HEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 472 (791)
T ss_dssp EEEEECB-SSEEEECTTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred ccccccc-cceeEeeccCCcceeeec---CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCC
Confidence 4444433 568888877655443332 2233344 4554444 445555678888888753 122112223445
Q ss_pred eEEEEEeccC-CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-
Q psy8152 130 LECMKHNKHS-NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK- 207 (444)
Q Consensus 130 v~~~~~~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 207 (444)
...|++.+.+ +++++-...+.|.+.++........+..... ....|++.|...+|+....
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~------------------~P~gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS------------------KPRAIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC------------------CEEEEEEETTTTEEEEEECS
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC------------------CcceEEEecCCCCEEEecCC
Confidence 6789998855 5555656678999999875433222221112 4789999998666655542
Q ss_pred -CceEEEEEcCCCCCccceEEE-eCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcceeEecc--ccCceeEEE
Q psy8152 208 -QGYVRVYDPKITTQRRPVLKV-DIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKPCYKYKG--FAGCVKDIA 282 (444)
Q Consensus 208 -d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~--h~~~i~~~~ 282 (444)
.+.|...++. +.....+ ...-.....|++.+.+..|+.+ ...+.|..+++.. ......+.. .-....+|+
T Consensus 535 ~~~~I~~~~~d----G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~gla 609 (791)
T 3m0c_C 535 TPAKIKKGGLN----GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLA 609 (791)
T ss_dssp SSCEEEEEETT----SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEE
T ss_pred CCCeEEEEecC----CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCCEEE
Confidence 3688888887 2222222 2333567899999766555554 5567899999864 333222222 122345666
Q ss_pred ecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 283 CPLNENLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 283 ~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
+.. +.++++-...+.|...+..+++.+..+.
T Consensus 610 v~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 610 VFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 632 3444454566788888877776655553
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.22 E-value=0.0051 Score=60.00 Aligned_cols=232 Identities=9% Similarity=-0.087 Sum_probs=136.7
Q ss_pred cEEEEEEcCCeEEEEeCCCCccccceeeccc-cccEEEEEeCCCeEE-EEecCCcEEEEEcCCCCccccccccCCCeEEE
Q psy8152 56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFG-EGDIVGVSRYDECIL-TAVKSGDVKLWRYKTEPDQWTNFNVGPQLECM 133 (444)
Q Consensus 56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~~~v~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~ 133 (444)
.+|+.+ ..+.|+..++.+......+...+- ....+++.+.+..|+ +-...+.|+.+++..................+
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 345554 447899999986554333322221 222345566555544 44567889988887554332122222456788
Q ss_pred EEecc-CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe--CCce
Q psy8152 134 KHNKH-SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS--KQGY 210 (444)
Q Consensus 134 ~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~ 210 (444)
++.+. ++++++-...+.|.+.++........+..... ....|++.|...+|+... ..+.
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~------------------~P~~iavdp~~G~lY~tD~g~~~~ 147 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD------------------SPRALALDPAEGFMYWTEWGGKPK 147 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCC------------------CEEEEEEETTTTEEEEEECSSSCE
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCC------------------CcccEEEccCCCeEEEeCCCCCCE
Confidence 99874 45555556678899999875432211111111 378999998665555544 2568
Q ss_pred EEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCE
Q psy8152 211 VRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENL 289 (444)
Q Consensus 211 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~ 289 (444)
|...++. ... ...+...-.....|++++.+..|+. -...+.|..+++.. ... ..+.........|++.. +.+
T Consensus 148 I~r~~~d-G~~---~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG-~~~-~v~~~~l~~P~glav~~-~~l 220 (628)
T 4a0p_A 148 IDRAAMD-GSE---RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG-LNR-EVIADDLPHPFGLTQYQ-DYI 220 (628)
T ss_dssp EEEEETT-SCS---CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSC-EEEEECCSCEEEEEEET-TEE
T ss_pred EEEEeCC-CCc---eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC-Cce-EEeeccCCCceEEEEEC-CEE
Confidence 8888887 212 2222234456789999997655554 45667899999875 333 33433334456777764 444
Q ss_pred EEEEECCCcEEEEEcCCCceEEEe
Q psy8152 290 ILSVSLDRHFRVHDFHSKKLLRKD 313 (444)
Q Consensus 290 l~s~~~dg~i~vw~~~~~~~~~~~ 313 (444)
+++-...+.|...+..+++....+
T Consensus 221 y~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 221 YWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEecCCCCEEEEEECCCCCceEEE
Confidence 555555788999998777654443
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.20 E-value=0.00047 Score=60.88 Aligned_cols=189 Identities=13% Similarity=0.168 Sum_probs=120.1
Q ss_pred cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecC----CC---EEEEE-eC--
Q psy8152 138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN----SD---KVAVC-SK-- 207 (444)
Q Consensus 138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~-~~-- 207 (444)
...+++.....+-|.+||+ .++.+..+.. . .++.+..-|. ++ ++++. ..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g------------------~~nnVD~r~~~~l~g~~~dla~as~R~~~ 97 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--G------------------KLNNVDIRYDFPLNGKKVDIAAASNRSEG 97 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--S------------------CEEEEEEEEEEEETTEEEEEEEEEECSTT
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--C------------------CcccEEEecccccCCceEeEEEEeCCCCC
Confidence 3455666667788999999 7888877753 2 2455555442 21 23333 33
Q ss_pred CceEEEEEcCCCCCccceEEEeC-------CCCCeeEEEE--ccC-CC-EEEEEcCCCcEEEEEcCC------CCcceeE
Q psy8152 208 QGYVRVYDPKITTQRRPVLKVDI-------PDVALSCITT--TNQ-SH-YVIVGSTTGDMMAVDLRG------KGKPCYK 270 (444)
Q Consensus 208 d~~i~i~d~~~~~~~~~~~~~~~-------~~~~i~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~~------~~~~~~~ 270 (444)
+++|++|++. .....+..+.. ....+..+|+ +|. +. ++++...+|.+..|++.. ..+.+++
T Consensus 98 ~n~l~vf~iD--p~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 98 KNTIEIYAID--GKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CCEEEEEEEC--TTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEEEC--CCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 5799999884 12223443321 1145677888 664 43 688888999999998832 0456677
Q ss_pred eccccCceeEEEecCCCCEEEEEECCCcEEEEEcC-----CCceEEEee---cCCceeEEEEcCCCcccccchhhhhccc
Q psy8152 271 YKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFH-----SKKLLRKDY---MQSRLTSILVRSDFSLENETKKEEQEHS 342 (444)
Q Consensus 271 ~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~-----~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~s 342 (444)
|.. .+.+-.|+..+...+|+.+-.+..|..++.. +++++..+. ....+..+++-..-. ..+.+++|
T Consensus 176 f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~-----g~gyLivS 249 (355)
T 3amr_A 176 FKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAAD-----GKGYLMAS 249 (355)
T ss_dssp EEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGG-----GCEEEEEE
T ss_pred ecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCC-----CCEEEEEE
Confidence 764 4567888998888899999998777666754 345555543 234678888743310 11234555
Q ss_pred cccCCCccccCCC
Q psy8152 343 EEKGDSDEKYDPE 355 (444)
Q Consensus 343 ~~~d~~i~~W~~~ 355 (444)
.-.+++..+|+..
T Consensus 250 sQG~~s~~Vydr~ 262 (355)
T 3amr_A 250 SQGNSSYAIYDRQ 262 (355)
T ss_dssp EGGGTEEEEEESS
T ss_pred cCCCCEEEEEECC
Confidence 5467789999886
No 299
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.18 E-value=0.00064 Score=59.90 Aligned_cols=228 Identities=12% Similarity=0.130 Sum_probs=115.8
Q ss_pred cccEEEecCC----CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcC-----CeEEEEeCCCCc
Q psy8152 6 DYNIYIGSST----GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSG-----QKIKIYDTDFKN 76 (444)
Q Consensus 6 ~~~l~~g~~d----g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d-----~~i~vw~~~~~~ 76 (444)
+..++.|+.+ ..+.+|++.+.+- ..+..+.....-.+++.. ++..++.|+.+ ..+.+||..+.+
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERW-----HQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQ 88 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEE-----EEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcE-----eEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCc
Confidence 4566777653 4578888877652 222222111111222222 46677777754 468889988766
Q ss_pred cccceeeccccccEEEEEeCCCeEEEEecCC-----cEEEEEcCCCCccccccc--cCCCeEEEEEeccCCEEEEeeCC-
Q psy8152 77 FNTNTDVSFGEGDIVGVSRYDECILTAVKSG-----DVKLWRYKTEPDQWTNFN--VGPQLECMKHNKHSNIIATGGKE- 148 (444)
Q Consensus 77 ~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d- 148 (444)
....-..+.......+...++.+++.|+.++ .+.+||+.+.+... ... ....-.+++. .++++++.|+.+
T Consensus 89 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH-VAPMNTRRSSVGVGV-VGGLLYAVGGYDV 166 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE-ECCCSSCCBSCEEEE-ETTEEEEECCEET
T ss_pred eeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee-cCCCCCcccCceEEE-ECCEEEEEeCCCC
Confidence 5433222221222223345677777777653 47788877665432 111 1111112222 266777777643
Q ss_pred ------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEcC
Q psy8152 149 ------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDPK 217 (444)
Q Consensus 149 ------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~ 217 (444)
..+.+||+.+.+-...-..... . .-.+++. -++++++.|+.+ ..+.+||+.
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIAEMSTR----------------R-SGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEECCCSSC----------------C-BSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred CCCccccEEEEEeCCCCcEEECCCCccc----------------c-ccccEEE-ECCEEEEECCCCCCcccceEEEEeCC
Confidence 3578888877543221110000 0 1112222 256777777654 368899988
Q ss_pred CCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC-----cEEEEEcCC
Q psy8152 218 ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG-----DMMAVDLRG 263 (444)
Q Consensus 218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 263 (444)
+.....+..+....... +++. .++++++.|+.++ .+.+||+.+
T Consensus 229 -~~~W~~~~~~~~~r~~~-~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 229 -TNAWRQVADMNMCRRNA-GVCA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp -TTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred -CCCEeeCCCCCCccccC-eEEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 23333332222111111 2222 2667777777653 488888876
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.16 E-value=0.0014 Score=57.42 Aligned_cols=202 Identities=12% Similarity=0.109 Sum_probs=118.9
Q ss_pred EEEeCCCeE-EEEecCCcEEEEEcCCCCcccccccc-------CCCeEEEEE---eccCCEEEEee-------------C
Q psy8152 92 GVSRYDECI-LTAVKSGDVKLWRYKTEPDQWTNFNV-------GPQLECMKH---NKHSNIIATGG-------------K 147 (444)
Q Consensus 92 ~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~-------------~ 147 (444)
.+.+....| ++.-..++|..|+...+......... ...+..|.| .|++.++++.. .
T Consensus 19 ~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 19 IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSS
T ss_pred cCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCC
Confidence 344433444 44447899999998765443222222 114689999 57877776543 2
Q ss_pred CCeEEEEEcC---Cceeeeeeeccc--ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-ceEEEEEcCCCCC
Q psy8152 148 ENDLKLWDLN---TTKNIFSAKNVS--HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-GYVRVYDPKITTQ 221 (444)
Q Consensus 148 d~~i~vwd~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~ 221 (444)
+..|..||+. +++.+....... .... ............|+..++|+..++++.. +.|...+..
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~-------~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd---- 167 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFE-------KKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD---- 167 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHH-------HHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT----
T ss_pred CCEEEEEcCCcCCCCCEEEEecCcccccccc-------ccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC----
Confidence 6789999999 777665543211 0000 0000001147899999999999988888 887777766
Q ss_pred ccceEEE--eC----CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc--eeEec--cc---cCceeEE-EecCCC
Q psy8152 222 RRPVLKV--DI----PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP--CYKYK--GF---AGCVKDI-ACPLNE 287 (444)
Q Consensus 222 ~~~~~~~--~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~--~h---~~~i~~~-~~s~~~ 287 (444)
++.+..+ .. .....+.|+++|+|++|++....|.|..+|+.. ... +. +. +. -.....| ..-.+|
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~-pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G 245 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK-PYAWPEP-VKINGDFGTLSGTEKIVTVPVGN 245 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS-SSCCCEE-CEESSCCCCCTTEEEEEEEEETT
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC-Ccceeec-ccccCCcccccCcccccccccCC
Confidence 2222222 11 122367999999999988887799999999886 322 21 11 21 1122332 333466
Q ss_pred CE-EEEEECCCcEEEEEcCC
Q psy8152 288 NL-ILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 288 ~~-l~s~~~dg~i~vw~~~~ 306 (444)
+. |++.+..+.+.+.+...
T Consensus 246 ~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 246 ESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEEEETTEEEEEECSST
T ss_pred EEEEEEcCCCCEEEEECCCC
Confidence 66 55555566555555444
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.14 E-value=2.8e-05 Score=76.99 Aligned_cols=226 Identities=10% Similarity=-0.061 Sum_probs=126.8
Q ss_pred CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEE-ecCCcEEEEEcCC----CCccccccccCCCeEEEEEec-c
Q psy8152 65 QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTA-VKSGDVKLWRYKT----EPDQWTNFNVGPQLECMKHNK-H 138 (444)
Q Consensus 65 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~-~~dg~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~-~ 138 (444)
+.|++.++.+......+.. ......+++.+.+..|+.+ ...+.|+.+++.. ......+.........|++.+ .
T Consensus 386 ~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred cceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 5778888876655444321 1223334566656655554 4567899999875 222211211223456788876 4
Q ss_pred CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC--CceEEEEEc
Q psy8152 139 SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK--QGYVRVYDP 216 (444)
Q Consensus 139 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~i~d~ 216 (444)
++++++-...+.|.++++........+..... ....|++.|.+.+|+.+.. .+.|..+++
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~------------------~P~giavDp~~g~ly~td~~~~~~I~~~~~ 526 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGS------------------KPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 526 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSC------------------CCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCC------------------CcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence 55555555678899999875433222221111 3567889887655544432 267888877
Q ss_pred CCCCCccceEEEeCCCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCcceeEec--cccCceeEEEecCCCCEEEEE
Q psy8152 217 KITTQRRPVLKVDIPDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGKPCYKYK--GFAGCVKDIACPLNENLILSV 293 (444)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~h~~~i~~~~~s~~~~~l~s~ 293 (444)
. +....+. +...-.....|+|+|++ +++++-...+.|.++++.. ......+. ........|++..+ .++++.
T Consensus 527 d--G~~~~~l-~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~~~P~glavd~~-~lywtd 601 (699)
T 1n7d_A 527 N--GVDIYSL-VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFED-KVFWTD 601 (699)
T ss_dssp S--SCCCCEE-SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS-SCCEEECCCSSSCSSCCCCEEETT-EEEEEC
T ss_pred C--CCCeeEE-EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC-CceEEEEecCCcCCCceEeEEECC-EEEEEe
Confidence 6 1111111 11222345789999875 4555556677899999864 32222222 11223345566443 455555
Q ss_pred ECCCcEEEEEcCCCceEEEee
Q psy8152 294 SLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 294 ~~dg~i~vw~~~~~~~~~~~~ 314 (444)
...+.|..++..+++.+..+.
T Consensus 602 ~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 602 IINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp STTTCEEEEETTTEEEEECCC
T ss_pred CCCCeEEEEEccCCCceEEee
Confidence 667889999988888777664
No 302
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.13 E-value=0.00041 Score=61.25 Aligned_cols=229 Identities=10% Similarity=0.014 Sum_probs=117.1
Q ss_pred cEEEEEEc--CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC----CcEEEEEcCCCCccccc-cccCC
Q psy8152 56 SELLIAYS--GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS----GDVKLWRYKTEPDQWTN-FNVGP 128 (444)
Q Consensus 56 ~~l~~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~-~~~~~ 128 (444)
..++.|+. ...+.+||..+.+....-..+........+..++.+++.|+.+ ..+.+||+.+.+..... .....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 34455554 3678899988776544322222222223334567777777754 56888998876543211 11111
Q ss_pred CeEEEEEeccCCEEEEeeCC------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEE
Q psy8152 129 QLECMKHNKHSNIIATGGKE------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKV 202 (444)
Q Consensus 129 ~v~~~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 202 (444)
.-.+++ .-++.+++.|+.+ ..+.+||+.+.+-...-..... . .-.+++. -+++++
T Consensus 93 ~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~~iy 153 (306)
T 3ii7_A 93 DSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ----------------R-CSHGMVE-ANGLIY 153 (306)
T ss_dssp BSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC----------------C-BSCEEEE-ETTEEE
T ss_pred cceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC----------------c-ceeEEEE-ECCEEE
Confidence 111222 2267777888765 4588888887653221110000 0 1112222 255666
Q ss_pred EEEeC---------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCCCCcc-
Q psy8152 203 AVCSK---------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRGKGKP- 267 (444)
Q Consensus 203 ~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~- 267 (444)
+.|+. -..+.+||+. +.....+..+...... .+++.. ++++++.|+.+ ..+.+||+.+ .+-
T Consensus 154 v~GG~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~-~~W~ 229 (306)
T 3ii7_A 154 VCGGSLGNNVSGRVLNSCEVYDPA-TETWTELCPMIEARKN-HGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKL-NEWK 229 (306)
T ss_dssp EECCEESCTTTCEECCCEEEEETT-TTEEEEECCCSSCCBS-CEEEEE-TTEEEEECCEETTEEBCCEEEEETTT-TEEE
T ss_pred EECCCCCCCCcccccceEEEeCCC-CCeEEECCCccchhhc-ceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCC-CcEE
Confidence 66653 3458899988 2223333222211111 222222 56777777654 3588999886 431
Q ss_pred -eeEeccccCceeEEEecCCCCEEEEEECC-----CcEEEEEcCCCce
Q psy8152 268 -CYKYKGFAGCVKDIACPLNENLILSVSLD-----RHFRVHDFHSKKL 309 (444)
Q Consensus 268 -~~~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~~~~ 309 (444)
+..++........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 230 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 230 MVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp ECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred ECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 1122211122223333 56777777754 4688888887543
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.0028 Score=59.27 Aligned_cols=242 Identities=10% Similarity=0.037 Sum_probs=131.1
Q ss_pred ccEEEe-cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEee-------eccCCcEEEEEEcCC-------eEEEEe
Q psy8152 7 YNIYIG-SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNW-------GNVEESELLIAYSGQ-------KIKIYD 71 (444)
Q Consensus 7 ~~l~~g-~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~~l~~~~~d~-------~i~vw~ 71 (444)
..|+++ ...+.|+++++..+.. ..+..... ........|+| + +++.+|+++...+ .|.+++
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v--~~l~~~~~-~~~~~p~~ia~~~~~~~~d-~~G~~lyvad~~~~~~~~~~~V~~i~ 227 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRML--SSPLNINT-IPTNRIRSIAFNKKIEGYA-DEAEYMIVAIDYDGKGDESPSVYIIK 227 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEE--EEEECCTT-SSCSBEEEEEECCCBTTTB-CTTCEEEEEECCCTTGGGEEEEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCEE--EEEEccCc-cccCCCcEEEEeecccccC-CCCCEEEEEeCCCCCcccCceEEEEe
Confidence 344444 3346788888777663 22211111 12346899999 9 7888777766543 255665
Q ss_pred CCC-Cccc-----cceeeccccccEEEEEeCC-CeEEEEecCCcEEEEEcC-------CCCc-----------cccc--c
Q psy8152 72 TDF-KNFN-----TNTDVSFGEGDIVGVSRYD-ECILTAVKSGDVKLWRYK-------TEPD-----------QWTN--F 124 (444)
Q Consensus 72 ~~~-~~~~-----~~~~~~~~~~~v~~~s~~~-~~l~~~~~dg~i~iw~~~-------~~~~-----------~~~~--~ 124 (444)
... +... ..+.. .....-.++.|++ .++++-...+.|..+++. ++.. ...+ .
T Consensus 228 r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~ 306 (496)
T 3kya_A 228 RNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI 306 (496)
T ss_dssp CCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC
T ss_pred cCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec
Confidence 333 3332 12221 1122334667754 455556677889999987 5553 1111 1
Q ss_pred ccCCCeEEEEEeccCCEEE-EeeCCCeEEEEEcCC--ceee--eeeecccceeeEeeeCCCc--ccccCcccee-EEEEe
Q psy8152 125 NVGPQLECMKHNKHSNIIA-TGGKENDLKLWDLNT--TKNI--FSAKNVSHRVLVYSVKPDE--FDLRRPVWVN-GISFL 196 (444)
Q Consensus 125 ~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vwd~~~--~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~-~~~~~ 196 (444)
........++|+|++++|+ +-+..+.|+.++... +... ..+-+.... ..+. ++ ...... ... .++..
T Consensus 307 ~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~---~G~~-DG~~~~a~f~-~P~~gv~vd 381 (496)
T 3kya_A 307 ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ---SGYR-DDVGTEARMN-NPCQGVFVK 381 (496)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB---CCCB-CCBGGGCBCS-SEEEEEEEE
T ss_pred CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC---Cccc-CCcccccccC-CCeEEEEEc
Confidence 2234467999999999544 445677888866543 2210 122111000 0000 11 001111 234 44554
Q ss_pred -------cCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCC------------------------CCCeeEEEEccC-C
Q psy8152 197 -------PNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIP------------------------DVALSCITTTNQ-S 244 (444)
Q Consensus 197 -------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------------------------~~~i~~~~~~~~-~ 244 (444)
+.+.++++-..+++|+.++.. + .+.++.+. -.....|+++++ +
T Consensus 382 ~~~~~~~~~g~lyVaD~~N~rIr~i~~~----G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 382 NPDYTGEEEYDFYFVDRLNFCVRKVTPE----G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp CTTCCSSCCEEEEEEEGGGTEEEEECTT----C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred cccccccCCCeEEEEECCCCEEEEEeCC----C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 456677777778899999854 2 23333221 123467888886 7
Q ss_pred CEEEEEcCCCcEEEEEcCC
Q psy8152 245 HYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 245 ~~l~~~~~dg~i~iwd~~~ 263 (444)
.++++=..+..|+.+++..
T Consensus 457 ~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp EEEEEETTTTEEEEEEECC
T ss_pred EEEEEeCCCCEEEEEECCC
Confidence 7666666777888888776
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.11 E-value=0.00039 Score=61.27 Aligned_cols=230 Identities=10% Similarity=0.007 Sum_probs=112.7
Q ss_pred CcEEEEEEcC----CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCCccccc-c
Q psy8152 55 ESELLIAYSG----QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEPDQWTN-F 124 (444)
Q Consensus 55 ~~~l~~~~~d----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~-~ 124 (444)
+..++.|+.+ ..+.+||+.+.+....-..+........+..++.+++.|+.+ ..+.+||..+.+..... .
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 3455555543 467888887765433222111111112233466777777654 35888888776543211 0
Q ss_pred ccCCCeEEEEEeccCCEEEEeeCCC-----eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC
Q psy8152 125 NVGPQLECMKHNKHSNIIATGGKEN-----DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS 199 (444)
Q Consensus 125 ~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 199 (444)
.....-.+++. .++.+++.|+.++ .+.+||+.+.+-...-..... . .-.+++. -++
T Consensus 96 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~ 156 (302)
T 2xn4_A 96 RDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR----------------R-SSVGVGV-VGG 156 (302)
T ss_dssp SSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC----------------C-BSCEEEE-ETT
T ss_pred CccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc----------------c-cCceEEE-ECC
Confidence 11111112222 2677777777653 467788776543221110000 0 1112222 255
Q ss_pred CEEEEEeCC-------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCCCCcc
Q psy8152 200 DKVAVCSKQ-------GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRGKGKP 267 (444)
Q Consensus 200 ~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~ 267 (444)
++++.|+.+ ..+.+||+. +.....+..+.........+.+ ++++++.|+.+ ..+.+||+.+ .+-
T Consensus 157 ~iyv~GG~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W 232 (302)
T 2xn4_A 157 LLYAVGGYDVASRQCLSTVECYNAT-TNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTT-NAW 232 (302)
T ss_dssp EEEEECCEETTTTEECCCEEEEETT-TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTT-TEE
T ss_pred EEEEEeCCCCCCCccccEEEEEeCC-CCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCC-CCE
Confidence 667766542 358889987 3333333222222222222222 56777777764 3688999886 432
Q ss_pred ee--EeccccCceeEEEecCCCCEEEEEECCC-----cEEEEEcCCCce
Q psy8152 268 CY--KYKGFAGCVKDIACPLNENLILSVSLDR-----HFRVHDFHSKKL 309 (444)
Q Consensus 268 ~~--~~~~h~~~i~~~~~s~~~~~l~s~~~dg-----~i~vw~~~~~~~ 309 (444)
.. .+.........+. .++++++.|+.++ .+.+||+.+.+-
T Consensus 233 ~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred eeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 21 1111111111222 2566777777553 478888877543
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.07 E-value=0.0028 Score=57.10 Aligned_cols=234 Identities=12% Similarity=0.091 Sum_probs=116.9
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec---cccccE--EEEEeC---CCeEEEEec-C-----Cc
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS---FGEGDI--VGVSRY---DECILTAVK-S-----GD 108 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~---~~~~~v--~~~s~~---~~~l~~~~~-d-----g~ 108 (444)
.....|+|. |++. |+++...|.|++++ .++........ ...... ++++|+ +..|+++.. . +.
T Consensus 31 ~~P~~ia~~-pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFL-PDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEEC-TTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEc-CCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 456899999 7887 45556669999998 34321111110 112223 445666 445554433 2 56
Q ss_pred EEEEEcCCCCc-----ccc-cc---ccCCCeEEEEEeccCCEEEEeeCC-------------CeEEEEEcCCceeeee--
Q psy8152 109 VKLWRYKTEPD-----QWT-NF---NVGPQLECMKHNKHSNIIATGGKE-------------NDLKLWDLNTTKNIFS-- 164 (444)
Q Consensus 109 i~iw~~~~~~~-----~~~-~~---~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~-- 164 (444)
|..|++..+.. +.. +. ........++|.|+|.++++.+.. |.|.-++... +....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~np 185 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EPAPGNP 185 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CCCCCCc
Confidence 77787764321 111 11 111234689999999766664432 3344443331 00000
Q ss_pred ee---cccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCce--------EEEEEcCCC-------------
Q psy8152 165 AK---NVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQGY--------VRVYDPKIT------------- 219 (444)
Q Consensus 165 ~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~--------i~i~d~~~~------------- 219 (444)
+. +....+...- + .....++|+| ++.++++-..... |.+......
T Consensus 186 f~~~~~~~~~i~a~G---------~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~ 255 (352)
T 2ism_A 186 FLGRRGARPEVYSLG---------H-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDP 255 (352)
T ss_dssp TTTCTTSCTTEEEEC---------C-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCT
T ss_pred ccCCCCCCccEEEEc---------C-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCC
Confidence 00 0000000000 0 0267789999 5665555433333 333221100
Q ss_pred CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc------eeEeccccCceeEEEecCCCCEEEEE
Q psy8152 220 TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP------CYKYKGFAGCVKDIACPLNENLILSV 293 (444)
Q Consensus 220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~------~~~~~~h~~~i~~~~~s~~~~~l~s~ 293 (444)
....++..+..+ .....++| .+|.++++....+.|...++.. ... ...+..-...+..+++.|+|.++++.
T Consensus 256 ~~~~p~~~~~~~-~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~-~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 256 RYRDPLYFWPQG-FPPGNLAF-FRGDLYVAGLRGQALLRLVLEG-ERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp TSCCCSEECTTC-CCEEEEEE-ETTEEEEEETTTTEEEEEEEEE-ETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCcCCeEecCCC-CCCcceEE-ECCEEEEEECCCCEEEEEEECC-CCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 001344444323 34567888 4677777777777888887765 321 12222223578899999999866665
Q ss_pred E
Q psy8152 294 S 294 (444)
Q Consensus 294 ~ 294 (444)
.
T Consensus 333 ~ 333 (352)
T 2ism_A 333 S 333 (352)
T ss_dssp C
T ss_pred e
Confidence 3
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.06 E-value=0.0047 Score=53.62 Aligned_cols=266 Identities=9% Similarity=0.073 Sum_probs=154.9
Q ss_pred CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe
Q psy8152 16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR 95 (444)
Q Consensus 16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~ 95 (444)
..|.|.|+..+..+.+ +.+ .--+.-.+ |..+.||.-. ..++.|+|+++...++.+.. ...|.-+.+
T Consensus 49 ~~VvIiDl~n~~~~~R--rpi-------~AdsAIMn-P~~~ViALra-g~~LQiFnletK~klks~~~---~e~VvfWkW 114 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIR--RPI-------SADSAIMN-PASKVIALKA-GKTLQIFNIEMKSKMKAHTM---TDDVTFWKW 114 (365)
T ss_dssp EEEEEEETTSTTSCEE--EEC-------CCSEEEEC-SSSSEEEEEE-TTEEEEEETTTTEEEEEEEC---SSCEEEEEE
T ss_pred CEEEEEECCCCCCccc--ccc-------ccceeeeC-CCccEEEEec-CCeEEEechHHhhhhcceec---CCccEEEEe
Confidence 3677778776653110 111 11223346 6777777665 58999999999988888754 456666665
Q ss_pred -CCCeEEEEecCCcEEEEEcCCC-Ccccccccc----CCCeEEEEEeccCCEEEEeeC-------CCeEEEEEcCCceee
Q psy8152 96 -YDECILTAVKSGDVKLWRYKTE-PDQWTNFNV----GPQLECMKHNKHSNIIATGGK-------ENDLKLWDLNTTKNI 162 (444)
Q Consensus 96 -~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~i~vwd~~~~~~~ 162 (444)
+.+.|+..+. ..|+-|++... .+.+.+..| ...|..-..+++.++++..+- .|.+.+|..+.+. .
T Consensus 115 is~~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-s 192 (365)
T 2xzh_A 115 ISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-S 192 (365)
T ss_dssp CSSSEEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-E
T ss_pred cCCCeEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-c
Confidence 3455555544 48999998753 343323333 456777788888888775542 3678889887543 3
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc-----eEEE-eC---CCC
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP-----VLKV-DI---PDV 233 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-----~~~~-~~---~~~ 233 (444)
+.+.+|......+.+... ..+..+.|.+... ...++++|.++.....+.+ ...+ .. ...
T Consensus 193 Q~ieGhaa~F~~~~~~g~----~~~~~lf~fa~r~--------~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~D 260 (365)
T 2xzh_A 193 QPIEGHAASFAQFKMEGN----AEESTLFCFAVRG--------QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 260 (365)
T ss_dssp EEECCSEEEEEEECCTTC----SSCEEEEEEEEEE--------TTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTC
T ss_pred ceeeeeeeeeEEEecCCC----CCCceEEEEEEec--------CCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCC
Confidence 344555442222221111 0011122222211 1125899999862101111 1111 11 133
Q ss_pred CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE
Q psy8152 234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL 310 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 310 (444)
-..++..++.-..++.-+.-|.|++||+.+ +.++..-+--..+|...+.+....-++.....|.|.--.+....++
T Consensus 261 FPVamqvs~kygviyviTK~G~ihlyDleT-gt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 261 FPVAMQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred ceEEEEecccCCEEEEEeCCcEEEEEEccc-CcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 445788888878899999999999999999 9998877655555554444444444555556776666666554443
No 307
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.05 E-value=0.0009 Score=59.13 Aligned_cols=230 Identities=12% Similarity=0.008 Sum_probs=115.0
Q ss_pred CcccEEEecC----CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----C-----CeEEEEe
Q psy8152 5 DDYNIYIGSS----TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----G-----QKIKIYD 71 (444)
Q Consensus 5 ~~~~l~~g~~----dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----d-----~~i~vw~ 71 (444)
++.+++.|+. -..+.+|+..+.+- ..+..+.....-.+++.. ++..++.|+. + ..+.+||
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-----~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d 96 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW-----LRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYN 96 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEE-----EECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeE-----eECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEEC
Confidence 3456666663 24678888877662 222222111111223333 4666666665 2 4688899
Q ss_pred CCCCccccceeeccccccEEEEEeCCCeEEEEecC-----CcEEEEEcCCCCccccc-cccCCCeEEEEEeccCCEEEEe
Q psy8152 72 TDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS-----GDVKLWRYKTEPDQWTN-FNVGPQLECMKHNKHSNIIATG 145 (444)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~ 145 (444)
+.+.+....-..+...........++++++.|+.+ ..+.+||+.+.+..... ......-.+++.. ++.+++.|
T Consensus 97 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~G 175 (308)
T 1zgk_A 97 PMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVG 175 (308)
T ss_dssp TTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred CCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEe
Confidence 88766443322222122222333467777777644 35888888776543211 0111111122222 67777777
Q ss_pred eCC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEE
Q psy8152 146 GKE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYD 215 (444)
Q Consensus 146 ~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d 215 (444)
+.+ ..+.+||+.+.+-... ..... +..-.+++.. ++++++.|+.+ ..+.+||
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~-~~~p~----------------~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd 237 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMI-TAMNT----------------IRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYD 237 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEC-CCCSS----------------CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEE
T ss_pred CCCCCCcCceEEEEeCCCCeEeeC-CCCCC----------------ccccceEEEE-CCEEEEEeCCCCCCccceEEEEe
Confidence 754 4578888876543221 11000 0011222222 56777777664 4689999
Q ss_pred cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152 216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG 263 (444)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 263 (444)
+. ......+..+.........+.+ ++++++.|+.+ ..+.+||+.+
T Consensus 238 ~~-~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 238 VE-TETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp TT-TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CC-CCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 88 3333332222221111222222 56777777654 3577888776
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.03 E-value=0.0033 Score=61.27 Aligned_cols=227 Identities=12% Similarity=0.052 Sum_probs=121.4
Q ss_pred cCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEE-cCCeEEEEeCCCCccccceeecc-ccccE
Q psy8152 13 SSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAY-SGQKIKIYDTDFKNFNTNTDVSF-GEGDI 90 (444)
Q Consensus 13 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~~~~-~~~~v 90 (444)
.....|+..++...... ...+. ..-..+.+|+|+ +.+..|+.+. ..+.|+.+++........+...+ ....-
T Consensus 15 ~~~~~I~~i~~~~~~~~---~~~~~--~~~~~~~~ld~~-~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~G 88 (619)
T 3s94_A 15 ANRRDLRLVDATNGKEN---ATIVV--GGLEDAAAVDFV-FSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 88 (619)
T ss_dssp ECSSBEEEECCC------------C--BCCSCEEEEEEE-TTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEE
T ss_pred eccccEEEEeCCCCcce---EEEEE--cCCCceEEEEEE-eCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCe
Confidence 34567888888654310 01111 234557899999 5566666554 46789888887543212211111 22333
Q ss_pred EEEEeCCCe-EEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC--CCeEEEEEcCCceeeeeeec
Q psy8152 91 VGVSRYDEC-ILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK--ENDLKLWDLNTTKNIFSAKN 167 (444)
Q Consensus 91 ~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~ 167 (444)
+++.+.++. +++-...+.|.+.++............-.....|++.|.+..|+.+.. .+.|...++...........
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~ 168 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 168 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC
Confidence 556665554 444556788999998765433222234455778999996555544432 35676666654222211111
Q ss_pred ccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCE
Q psy8152 168 VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHY 246 (444)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 246 (444)
... +.+.|++.+.+..|..+ ...+.|..+++. ....+.+. .........|++..+ .+
T Consensus 169 ~~~------------------~P~Glald~~~~~LY~aD~~~~~I~~~~~d-G~~~~~~~--~~~~~~P~gi~~~~~-~l 226 (619)
T 3s94_A 169 EIY------------------WPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQAVV--KGSLPHPFALTLFED-IL 226 (619)
T ss_dssp SCS------------------SEEEEEEETTTTEEEEEETTTCCEEEESSS-CCEEC-----------CCCEEESSS-EE
T ss_pred CCC------------------CCcEEEEEccCCEEEEEeCCCCeEEEecCC-CCccEEEE--eCCCCCceEEEEeCC-EE
Confidence 111 57899999876555544 556789999887 22222221 111122356777655 45
Q ss_pred EEEEcCCCcEEEEEcCCCCcce
Q psy8152 247 VIVGSTTGDMMAVDLRGKGKPC 268 (444)
Q Consensus 247 l~~~~~dg~i~iwd~~~~~~~~ 268 (444)
+++-...+.|...|..+ ++.+
T Consensus 227 y~td~~~~~V~~~d~~t-g~~~ 247 (619)
T 3s94_A 227 YWTDWSTHSILACNKYT-GEGL 247 (619)
T ss_dssp EEECTTTCSEEEEESSS-CCCC
T ss_pred EEecCCCCEEEEEECCC-Cccc
Confidence 55556677898888876 5433
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.01 E-value=0.0011 Score=58.80 Aligned_cols=227 Identities=8% Similarity=-0.010 Sum_probs=111.6
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----C-------CeEEEEeCCCC
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----G-------QKIKIYDTDFK 75 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----d-------~~i~vw~~~~~ 75 (444)
.+++.|+ ..+.+||..+++-.. ..+. .........+.. .++..++.|+. + ..+.+||..+.
T Consensus 6 ~l~~~GG--~~~~~yd~~~~~W~~---~~~~--~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 77 (315)
T 4asc_A 6 LIFMISE--EGAVAYDPAANECYC---ASLS--SQVPKNHVSLVT-KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS 77 (315)
T ss_dssp EEEEEET--TEEEEEETTTTEEEE---EECC--CCSCSSEEEEEC-TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT
T ss_pred EEEEEcC--CceEEECCCCCeEec---CCCC--CCCCccceEEEE-ECCEEEEEcCcccCCCCCccccccceEEecCCCC
Confidence 4566666 578999998877321 1111 111111222222 35677777773 1 12778888876
Q ss_pred ccccceeeccccccEEEEEeCCCeEEEEecC--------CcEEEEEcCCCCccccccccCC-CeEEEEEeccCCEEEEee
Q psy8152 76 NFNTNTDVSFGEGDIVGVSRYDECILTAVKS--------GDVKLWRYKTEPDQWTNFNVGP-QLECMKHNKHSNIIATGG 146 (444)
Q Consensus 76 ~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d--------g~i~iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~ 146 (444)
+....-..+...........++.+++.|+.+ ..+.+||+.+.+... ...... .....+...++++++.|+
T Consensus 78 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 78 EWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE-SDPLPYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp EEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECC
T ss_pred eEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE-CCCCCCcccceeEEEECCEEEEEeC
Confidence 6543322211111112223466677777642 458889988765332 111111 111111223667778887
Q ss_pred C------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc-----eEEEEE
Q psy8152 147 K------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG-----YVRVYD 215 (444)
Q Consensus 147 ~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d 215 (444)
. -..+.+||+.+.+-...-..... . .-.+++. -++++++.|+.++ .+.+||
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------------r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd 218 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTA----------------R-SLFGATV-HDGRIIVAAGVTDTGLTSSAEVYS 218 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSC----------------C-BSCEEEE-ETTEEEEEEEECSSSEEEEEEEEE
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCc----------------h-hceEEEE-ECCEEEEEeccCCCCccceEEEEE
Confidence 6 24688888877543221110000 0 1112222 2567777777644 588899
Q ss_pred cCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC--------------cEEEEEcCC
Q psy8152 216 PKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG--------------DMMAVDLRG 263 (444)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------~i~iwd~~~ 263 (444)
+. +.....+..+.........+.+ ++++++.|+.++ .+.+||+.+
T Consensus 219 ~~-~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 219 IT-DNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp TT-TTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred CC-CCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 87 2333333222211111222222 566777776532 366777765
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.01 E-value=0.006 Score=52.96 Aligned_cols=243 Identities=7% Similarity=0.097 Sum_probs=148.6
Q ss_pred CcEEEEEE---cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE
Q psy8152 55 ESELLIAY---SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE 131 (444)
Q Consensus 55 ~~~l~~~~---~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~ 131 (444)
.+++.+-- ...+|.|.|+..+........ .....-++|..+.||.-. ..++.|+|+++.+.+. .......|.
T Consensus 36 DkyicVrE~~~~~~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klk-s~~~~e~Vv 110 (365)
T 2xzh_A 36 DKFICIREKVGEQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-AHTMTDDVT 110 (365)
T ss_dssp TTEEEEEEEETTEEEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE-EEECSSCEE
T ss_pred CceEEEEecCCCCCEEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhc-ceecCCccE
Confidence 45555422 224788999987666543322 222223478777777665 6789999999988775 444456777
Q ss_pred EEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC---
Q psy8152 132 CMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK--- 207 (444)
Q Consensus 132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--- 207 (444)
-=.|-. .+.|+..+. ..|+-|++.. ..+...+..|.. + ....|.....+++.++++..+-
T Consensus 111 fWkWis-~~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~-------------L-~~~QIInY~~d~~~kW~~l~GI~~~ 174 (365)
T 2xzh_A 111 FWKWIS-LNTVALVTD-NAVYHWSMEGESQPVKMFDRHSS-------------L-AGCQIINYRTDAKQKWLLLTGISAQ 174 (365)
T ss_dssp EEEECS-SSEEEEEES-SEEEEEESSTTCCCEEEEECCGG-------------G-TTCEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEecC-CCeEEEEcC-CcEEEEcccCCCCCceeeecchh-------------c-ccceEEEEEECCCCCEEEEEeEecc
Confidence 777763 445555553 5799999975 345544444433 0 1235777777787777764432
Q ss_pred ----CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEcc--CC-CEEEEEcC---CCcEEEEEcCCC--Cccee------
Q psy8152 208 ----QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTN--QS-HYVIVGST---TGDMMAVDLRGK--GKPCY------ 269 (444)
Q Consensus 208 ----d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~-~~l~~~~~---dg~i~iwd~~~~--~~~~~------ 269 (444)
.|.+.+|... ++.-+.+.+|......+.+.- .. ++++.+.. .+.++|.++..+ +.+..
T Consensus 175 ~~~v~G~mQLYS~e----r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vd 250 (365)
T 2xzh_A 175 QNRVVGAMQLYSVD----RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVD 250 (365)
T ss_dssp TTEEEEEEEEEETT----TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEE
T ss_pred CCccceeEEEEeec----ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccce
Confidence 4789999988 555566777755433332211 11 22332222 258999998542 22111
Q ss_pred Ee-c--cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEE
Q psy8152 270 KY-K--GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSI 322 (444)
Q Consensus 270 ~~-~--~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~ 322 (444)
.+ + ......-++..++.-..++.-+.-|.|++||+.++.++..-. ....|-..
T Consensus 251 i~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 251 VFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 307 (365)
T ss_dssp ECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred eeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEe
Confidence 11 1 113344578888888889999999999999999999988755 33444333
No 311
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.97 E-value=0.00084 Score=59.35 Aligned_cols=231 Identities=10% Similarity=0.040 Sum_probs=114.7
Q ss_pred CCcEEEEEEc----CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEec----C-----CcEEEEEcCCCCcc
Q psy8152 54 EESELLIAYS----GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVK----S-----GDVKLWRYKTEPDQ 120 (444)
Q Consensus 54 ~~~~l~~~~~----d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~----d-----g~i~iw~~~~~~~~ 120 (444)
++..++.|+. -..+.+||..+.+....-..+...........++.+++.|+. + ..+.+||+.+.+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 3566666663 246889998876654432211111111223446667777765 2 46888888776533
Q ss_pred ccc-cccCCCeEEEEEeccCCEEEEeeCC-----CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 121 WTN-FNVGPQLECMKHNKHSNIIATGGKE-----NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 121 ~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
... ......-.+++. -++.+++.|+.+ ..+.+||+.+.+-...-..... . .-.+++
T Consensus 104 ~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------------r-~~~~~~ 165 (308)
T 1zgk_A 104 PCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR----------------R-IGVGVA 165 (308)
T ss_dssp ECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC----------------C-BSCEEE
T ss_pred ECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc----------------c-cceEEE
Confidence 211 011111111222 267777777643 3577888876543221110000 0 111222
Q ss_pred EecCCCEEEEEeCC-----ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCCC
Q psy8152 195 FLPNSDKVAVCSKQ-----GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRGK 264 (444)
Q Consensus 195 ~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 264 (444)
.. ++++++.|+.+ ..+.+||+. ......+..+.........+.+ ++++++.|+.+ ..+.+||+.+
T Consensus 166 ~~-~~~iyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~- 240 (308)
T 1zgk_A 166 VL-NRLLYAVGGFDGTNRLNSAECYYPE-RNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET- 240 (308)
T ss_dssp EE-TTEEEEECCBCSSCBCCCEEEEETT-TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-
T ss_pred EE-CCEEEEEeCCCCCCcCceEEEEeCC-CCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC-
Confidence 22 56777777654 468889987 2222222222222222222333 66777777664 4689999887
Q ss_pred Ccce--eEeccccCceeEEEecCCCCEEEEEECC-----CcEEEEEcCCCce
Q psy8152 265 GKPC--YKYKGFAGCVKDIACPLNENLILSVSLD-----RHFRVHDFHSKKL 309 (444)
Q Consensus 265 ~~~~--~~~~~h~~~i~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~~~~ 309 (444)
.+-. ..++........+.+ ++++++.|+.+ ..|.+||+.+.+-
T Consensus 241 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 241 ETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 4321 111111111122222 56677777644 3477788776543
No 312
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.90 E-value=0.003 Score=56.05 Aligned_cols=227 Identities=10% Similarity=0.020 Sum_probs=110.2
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc----CC-------eEEEEeCCCC
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS----GQ-------KIKIYDTDFK 75 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~----d~-------~i~vw~~~~~ 75 (444)
..++.|+. .+.+||..+.+-.. ..+.. .....-.+++. .++..++.|+. ++ .+.+||..+.
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~---~~~~~-~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 88 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYL---TALAE-QIPRNHSSIVT--QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS 88 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEE---EEECT-TSCSSEEEEEC--SSSCEEEEESSCC-------CCCBEEEEEETTTT
T ss_pred hhhhcccc--ceEEECCCCCceec---ccCCc-cCCccceEEEE--ECCEEEEECCcccCccccCCCccccEEEEeCCCC
Confidence 45556654 37889988777311 11111 01111223333 35677777773 11 2778888776
Q ss_pred ccccceeeccccccEEEEEeCCCeEEEEecC-------CcEEEEEcCCCCccccccccCCCeE-EEEEeccCCEEEEeeC
Q psy8152 76 NFNTNTDVSFGEGDIVGVSRYDECILTAVKS-------GDVKLWRYKTEPDQWTNFNVGPQLE-CMKHNKHSNIIATGGK 147 (444)
Q Consensus 76 ~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~ 147 (444)
+....-..+...........++.+++.|+.+ ..+.+||+.+.+... ......+.. ..+...++.+++.|+.
T Consensus 89 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 89 EWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp EEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEEETTEEEEECCE
T ss_pred cEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEEECCEEEEEcCC
Confidence 6544322222111222233467777777764 247788887665432 111111111 1111236777777764
Q ss_pred ------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCC-----ceEEEEEc
Q psy8152 148 ------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQ-----GYVRVYDP 216 (444)
Q Consensus 148 ------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~ 216 (444)
-..+.+||+.+.+-...-..... . .-.+++.. ++++++.|+.+ ..+.+||+
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------------r-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTP----------------R-SMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCSSC----------------C-BSCEEEEE-TTEEEEEEEEETTEEEEEEEEEET
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCCCC----------------c-ccceEEEE-CCEEEEEcCcCCCCccceEEEEEC
Confidence 23588889887543221110000 0 11222222 55777777643 35778998
Q ss_pred CCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC--------------CcEEEEEcCC
Q psy8152 217 KITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT--------------GDMMAVDLRG 263 (444)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~ 263 (444)
. +.....+..+.........+. .++++++.|+.+ ..+.+||+.+
T Consensus 230 ~-~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 230 K-TNKWEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp T-TCCEEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred C-CCeEEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 7 333333322222211112222 256677777654 3467777766
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.89 E-value=0.011 Score=53.16 Aligned_cols=229 Identities=13% Similarity=0.047 Sum_probs=119.2
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCc-cccceee-ccccccE--EEEEeC---CCeEEEEec----C----C
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKN-FNTNTDV-SFGEGDI--VGVSRY---DECILTAVK----S----G 107 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~~-~~~~~~v--~~~s~~---~~~l~~~~~----d----g 107 (444)
.....|+|. |++. |+++...|.|++++. .++ .+..+.. ....... ++++|+ +..|+++.. + .
T Consensus 29 ~~P~~ia~~-pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPL-GGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEE-ETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEc-CCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 456899999 6776 555566699999973 444 1111110 0112233 345665 445544433 2 5
Q ss_pred cEEEEEcCCCC--c-----ccc-cc-ccCCCeEEEEEeccCCEEEEeeCC-------------CeEEEEEcCCce-----
Q psy8152 108 DVKLWRYKTEP--D-----QWT-NF-NVGPQLECMKHNKHSNIIATGGKE-------------NDLKLWDLNTTK----- 160 (444)
Q Consensus 108 ~i~iw~~~~~~--~-----~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~vwd~~~~~----- 160 (444)
.|..|+..... . +.. +. ........++|.|+|.++++.+.. |.|.-++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 67777765431 1 100 11 111234679999999877765432 233333332110
Q ss_pred ----eeeeeecccceeeEeeeCCCcccccCccceeEEEEec-CCCEEEEEeCCc---eEEEEEcCC-------------C
Q psy8152 161 ----NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP-NSDKVAVCSKQG---YVRVYDPKI-------------T 219 (444)
Q Consensus 161 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~---~i~i~d~~~-------------~ 219 (444)
.+.. .++. ....++|+| .+.++++-.... .|.+...-. .
T Consensus 186 f~~~~i~a-~G~r-------------------np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~ 245 (354)
T 3a9g_A 186 FPNSPIWS-YGHR-------------------NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRG 245 (354)
T ss_dssp STTCCEEE-ECCS-------------------CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCT
T ss_pred CCCCcEEE-EccC-------------------CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCC
Confidence 0000 1111 256899999 566555443322 233332110 0
Q ss_pred CCccceEEEeCCCCCeeEEEEc-------cCCCEEEEEcCCCcEEEEEcCCCCcce--eEe-ccccCceeEEEecCCCCE
Q psy8152 220 TQRRPVLKVDIPDVALSCITTT-------NQSHYVIVGSTTGDMMAVDLRGKGKPC--YKY-KGFAGCVKDIACPLNENL 289 (444)
Q Consensus 220 ~~~~~~~~~~~~~~~i~~~~~~-------~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~-~~h~~~i~~~~~s~~~~~ 289 (444)
....++..+.........++|. .+|+++++....+.|...++...+... ..+ .+....+..+++.|+|.+
T Consensus 246 ~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~l 325 (354)
T 3a9g_A 246 EFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGI 325 (354)
T ss_dssp TSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCE
T ss_pred CCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcE
Confidence 0113444442223456788883 567788877777888888887512222 222 222457889999999976
Q ss_pred EEEEE
Q psy8152 290 ILSVS 294 (444)
Q Consensus 290 l~s~~ 294 (444)
+++..
T Consensus 326 yv~~~ 330 (354)
T 3a9g_A 326 LISTS 330 (354)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66653
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.89 E-value=0.0015 Score=57.84 Aligned_cols=224 Identities=11% Similarity=0.052 Sum_probs=110.7
Q ss_pred EEEEEEcCCeEEEEeCCCCccccceeecc--ccccEEEEEeCCCeEEEEec----C-------CcEEEEEcCCCCccccc
Q psy8152 57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSF--GEGDIVGVSRYDECILTAVK----S-------GDVKLWRYKTEPDQWTN 123 (444)
Q Consensus 57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~v~~~s~~~~~l~~~~~----d-------g~i~iw~~~~~~~~~~~ 123 (444)
+++.|+ ..+.+||..+++... ...+. .......+..++.+++.|+. + ..+.+||..+.+... +
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-M 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-C
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-C
Confidence 344455 579999998877543 22211 12222233457778888874 1 127778887765432 1
Q ss_pred cccCCCeE--EEEEeccCCEEEEeeCC--------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152 124 FNVGPQLE--CMKHNKHSNIIATGGKE--------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI 193 (444)
Q Consensus 124 ~~~~~~v~--~~~~~~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (444)
.....+-. +++.. ++.+++.|+.+ ..+.+||+.+.+-... ..... +..-.++
T Consensus 83 ~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~----------------~r~~~~~ 144 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES-DPLPY----------------VVYGHTV 144 (315)
T ss_dssp CCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC-CCCSS----------------CCBSCEE
T ss_pred CCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC-CCCCC----------------cccceeE
Confidence 11111111 12222 66777777742 4578888877542211 11000 0011222
Q ss_pred EEecCCCEEEEEeC------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCC-----cEEEEEcC
Q psy8152 194 SFLPNSDKVAVCSK------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTG-----DMMAVDLR 262 (444)
Q Consensus 194 ~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~ 262 (444)
+. -++++++.|+. -..+.+||+. +.....+..+......-.++.+ ++++++.|+.++ .+.+||+.
T Consensus 145 ~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 145 LS-HMDLVYVIGGKGSDRKCLNKMCVYDPK-KFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp EE-ETTEEEEECCBCTTSCBCCCEEEEETT-TTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred EE-ECCEEEEEeCCCCCCcccceEEEEeCC-CCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECC
Confidence 22 35567777765 2468899988 2223332222211111122222 667777777654 48889987
Q ss_pred CCCccee--EeccccCceeEEEecCCCCEEEEEECCC--------------cEEEEEcCCCce
Q psy8152 263 GKGKPCY--KYKGFAGCVKDIACPLNENLILSVSLDR--------------HFRVHDFHSKKL 309 (444)
Q Consensus 263 ~~~~~~~--~~~~h~~~i~~~~~s~~~~~l~s~~~dg--------------~i~vw~~~~~~~ 309 (444)
+ .+-.. .++........+.+ ++++++.|+.++ .|.+||+.+.+-
T Consensus 221 ~-~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 221 D-NKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp T-TEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred C-CeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 6 43221 11111111122222 556777776532 366777776543
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.83 E-value=0.017 Score=52.33 Aligned_cols=268 Identities=9% Similarity=0.072 Sum_probs=157.9
Q ss_pred CcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe
Q psy8152 16 GAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR 95 (444)
Q Consensus 16 g~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~ 95 (444)
..|-|.|+..+..+.+ ..+ .--+.-.+ |..+.||.-. ..++.|+|+++...++.+... ..|.-+.|
T Consensus 48 ~~vvIiDl~~~~~~~r--rpi-------~AdsAIMn-P~~~iiALra-g~~lQiFnle~K~klks~~~~---e~VvfWkW 113 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIR--RPI-------SADSAIMN-PASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKW 113 (494)
T ss_dssp CEEEEEETTSTTSCEE--EEC-------CCSEEEEC-SSSSCEEEEE-TTEEEEEETTTTEEEEEEECS---SCCCEEEE
T ss_pred CeEEEEECCCCCccee--ccc-------ccceeeeC-CCCcEEEEec-CCeEEEEchHHhhhhcceecC---CCceEEEe
Confidence 3677777776553100 111 11233356 6677777655 589999999998888887643 34444443
Q ss_pred -CCCeEEEEecCCcEEEEEcCCC-Ccccccccc----CCCeEEEEEeccCCEEEEeeC-------CCeEEEEEcCCceee
Q psy8152 96 -YDECILTAVKSGDVKLWRYKTE-PDQWTNFNV----GPQLECMKHNKHSNIIATGGK-------ENDLKLWDLNTTKNI 162 (444)
Q Consensus 96 -~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~i~vwd~~~~~~~ 162 (444)
+.+.|+..+ +..|+-|++... .+++.+..| ...|..-..+++.++++..+- .|.+.+|....+. .
T Consensus 114 is~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-s 191 (494)
T 1bpo_A 114 ISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-S 191 (494)
T ss_dssp EETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-E
T ss_pred cCCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-c
Confidence 344555543 458999998743 343323333 456777788888888875442 4678899887533 3
Q ss_pred eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc-----eEEE-eC---CCC
Q psy8152 163 FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP-----VLKV-DI---PDV 233 (444)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-----~~~~-~~---~~~ 233 (444)
+.+.+|......+.+.... .+..+.|.+.... ..++++|.++.....+.+ ...+ .. ...
T Consensus 192 Q~ieGhaa~F~~~~~~g~~----~~~~lf~fa~r~~--------~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~D 259 (494)
T 1bpo_A 192 QPIEGHAASFAQFKMEGNA----EESTLFCFAVRGQ--------AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 259 (494)
T ss_dssp EEECCSEEEEEEEECTTCS----SEEEEEEEEECST--------TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTC
T ss_pred chheeeeeeeEEEecCCCC----CCceEEEEEEecC--------CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccC
Confidence 3445555422222221110 0111222222111 136899999862101111 1111 11 123
Q ss_pred CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEE
Q psy8152 234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRK 312 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 312 (444)
...++..++.-..++.-+.-|.|++||+.+ +.++..-+-...+|...+.+....-++.....|.|.--.+....++..
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleT-gt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpy 337 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY 337 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred ceeEEEecccCCEEEEEecCceEEEEeccc-ceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccchhh
Confidence 345788888888899999999999999999 999987775556665555555555566666888777777766555443
No 316
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.81 E-value=0.029 Score=54.57 Aligned_cols=308 Identities=8% Similarity=-0.082 Sum_probs=154.3
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEc--CCeEEEEeCCCCccccceee
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYS--GQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~~ 83 (444)
++.+++-...+.|.+.++..... ..+.. ..-.....|++. |...+|+.+.. .+.|...++...........
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~-----~~l~~-~~l~~P~~Iavd-p~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~ 168 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLR-----KVLFW-QELDQPRAIALD-PSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 168 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC-----EEEEC-SSCSCCCCEEEE-TTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred CEEEEEeCCCCEEEEEECCCCCE-----EEEEe-CCCCCCceEEEe-cCCCeEEEeccCCCCEEEEEECCCCceEEEEeC
Confidence 34445555667788877765432 11110 223456789999 55555555543 35677777653332222211
Q ss_pred ccccccEEEEEeCCCeEEEE-ecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee
Q psy8152 84 SFGEGDIVGVSRYDECILTA-VKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI 162 (444)
Q Consensus 84 ~~~~~~v~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~ 162 (444)
......-+++.+.++.|+.+ ...+.|..+++..................+++..+ .++++-...+.|...|..+++..
T Consensus 169 ~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 169 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCccc
Confidence 11122335566666655554 45677888888754333211112222345666544 44455555677888887665432
Q ss_pred eeeeccc---ceeeE---------------------------------eeeCCCcccc----------------------
Q psy8152 163 FSAKNVS---HRVLV---------------------------------YSVKPDEFDL---------------------- 184 (444)
Q Consensus 163 ~~~~~~~---~~~~~---------------------------------~~~~~~~~~~---------------------- 184 (444)
..+.... ..+.+ ....|.++.+
T Consensus 248 ~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~ 327 (619)
T 3s94_A 248 REIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTD 327 (619)
T ss_dssp EECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSC
T ss_pred EEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccc
Confidence 2111000 00000 0001111100
Q ss_pred ------------------cCccceeEEEEecCCCEEE-EEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC-C
Q psy8152 185 ------------------RRPVWVNGISFLPNSDKVA-VCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ-S 244 (444)
Q Consensus 185 ------------------~~~~~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~ 244 (444)
..-..+.+|+|.+.+..|+ +-...+.|+.+++. .......+...-.....+++.+. +
T Consensus 328 i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~---g~~~~~v~~~~~~~p~GlAvD~~~~ 404 (619)
T 3s94_A 328 LRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFID---GSGSQFVVTAQIAHPDGIAVDWVAR 404 (619)
T ss_dssp EEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcC---CCccEEEEECCCCCcCceEEecccC
Confidence 0001245677776544444 33446677777776 21111222222345678999864 5
Q ss_pred CEEEEEcCCCcEEEEEcCCCCcceeEec-cccCceeEEEecCCCCEEEEEEC--CCcEEEEEcCCCceEEEee--cCCce
Q psy8152 245 HYVIVGSTTGDMMAVDLRGKGKPCYKYK-GFAGCVKDIACPLNENLILSVSL--DRHFRVHDFHSKKLLRKDY--MQSRL 319 (444)
Q Consensus 245 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~h~~~i~~~~~s~~~~~l~s~~~--dg~i~vw~~~~~~~~~~~~--~~~~i 319 (444)
++.++-+..+.|.+.++.. .....+. ..-....+|++.|...+|+.+.. ...|...++..... ..+. .-...
T Consensus 405 ~lY~tD~~~~~I~v~~~~G--~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~l~~P 481 (619)
T 3s94_A 405 NLYWTDTGTDRIEVTRLNG--TMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLVNTSLGWP 481 (619)
T ss_dssp EEEEEETTTTEEEEEETTS--CSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCE
T ss_pred cEEEEeCCCCcEEEEeCCC--CeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEEeCCCCCC
Confidence 5556666778899999875 3333333 23346789999997555555443 35666666654322 2222 23456
Q ss_pred eEEEEcCC
Q psy8152 320 TSILVRSD 327 (444)
Q Consensus 320 ~~~~~~~~ 327 (444)
+.+++...
T Consensus 482 ~GlalD~~ 489 (619)
T 3s94_A 482 NGLALDYD 489 (619)
T ss_dssp EEEEEETT
T ss_pred eeeEEccc
Confidence 67777643
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.80 E-value=0.002 Score=58.16 Aligned_cols=160 Identities=11% Similarity=0.171 Sum_probs=99.0
Q ss_pred EEeCCCeEEEEecCCcEEEEEcCCCCcccccccc-----CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeec
Q psy8152 93 VSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNV-----GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKN 167 (444)
Q Consensus 93 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 167 (444)
++.+|..++.+ .++.||.-++...... +.... -..|..+..+|+|++||..+. ..|.|..+..+.....-..
T Consensus 28 ~~~n~t~i~~a-~~n~iR~~~i~~~~~Y-k~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 28 SSQNGTRIVFI-QDNIIRWYNVLTDSLY-HSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EETTTTEEEEE-ETTEEEEEETTTCSSC-EEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred EEcCCCEEEEE-ECCEEEEEECCCCCcc-eEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence 34566666655 3467888777644322 12222 225788999999999999875 5899988874321111000
Q ss_pred --ccceeeEeeeCCCcccccCccceeEEEEecCC---CEEEEEeCCceEEEEEcCCCCCccceEEEe---------CCCC
Q psy8152 168 --VSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS---DKVAVCSKQGYVRVYDPKITTQRRPVLKVD---------IPDV 233 (444)
Q Consensus 168 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~~~ 233 (444)
..-....+.+.|. ....+.+|..+.|||-+ ..|++-..|+.|++||+.. ....|. .+. ....
T Consensus 105 ~~~~~q~~ty~l~~~--~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~-s~~~P~-~L~k~~~~fg~d~~~~ 180 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEE--EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN-SQEKPI-VLNKPNNSFGLDARVN 180 (452)
T ss_dssp HHHTTEEEEEEGGGC--C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC-TTSCCE-EESCCCSEEESCSSCC
T ss_pred cccccceeEEEcCCc--ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc-CCCCCc-chhccccccCCCcccc
Confidence 0111222233221 11124579999999976 6899999999999999982 223333 232 2236
Q ss_pred CeeEEEEccCCCEEEEEc--CCCcEEEE
Q psy8152 234 ALSCITTTNQSHYVIVGS--TTGDMMAV 259 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~--~dg~i~iw 259 (444)
.|.+++|.+++-.|++.+ ..|.|+-.
T Consensus 181 ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 181 DITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred eEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 788999999887777744 77877654
No 318
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.76 E-value=0.058 Score=56.46 Aligned_cols=325 Identities=9% Similarity=0.051 Sum_probs=156.7
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFG 86 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~ 86 (444)
.+|++|-.+|.+.-+.+..........+.. .++ ..+|.-..|. ..+..-+.+..+....+|.-. ++.... .....
T Consensus 618 ~~L~igl~dG~l~~~~~d~~tg~l~d~r~~-~LG-~~pv~L~~~~-~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~ 692 (1158)
T 3ei3_A 618 HYLLCALGDGALFYFGLNIETGLLSDRKKV-TLG-TQPTVLRTFR-SLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLK 692 (1158)
T ss_dssp EEEEEEETTSEEEEEEECTTTCCEEEEEEE-ECC-SSCCEEEEEE-SSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSS
T ss_pred cEEEEEeCCCeEEEEEEcCCCCccccceeE-EcC-CCceEEEEEe-eCCceeEEEECCCCEEEEEcC-CceEEe-ccChH
Confidence 578899999998877765422112111111 113 3455544454 333333333334444455433 322211 11110
Q ss_pred -cccEEEEEeC--CCeEEEEecCCcEEEEEcCCCCccc-cccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc-ee
Q psy8152 87 -EGDIVGVSRY--DECILTAVKSGDVKLWRYKTEPDQW-TNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT-KN 161 (444)
Q Consensus 87 -~~~v~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~ 161 (444)
-..+..|+.. ..-++..+ ++.++|..+...+... ....-...+..++++|..+.++.+..+.. .++.... .+
T Consensus 693 ~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~--~~~~~~~~~~ 769 (1158)
T 3ei3_A 693 EVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIE--VQDTSGGTTA 769 (1158)
T ss_dssp CCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEE--EECSSSSEEE
T ss_pred HhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEecc--ccccccccch
Confidence 1123334221 23455443 4569999886543221 23334667889999997776665543211 1111000 00
Q ss_pred ---------------------------eeeeecccceeeEeeeCCCcc------cccCccceeEEEEe---cC-CCEEEE
Q psy8152 162 ---------------------------IFSAKNVSHRVLVYSVKPDEF------DLRRPVWVNGISFL---PN-SDKVAV 204 (444)
Q Consensus 162 ---------------------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~---~~-~~~l~~ 204 (444)
...+..........-++|..+ .+.....+.+++.. .+ ..+|++
T Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvV 849 (1158)
T 3ei3_A 770 LRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIV 849 (1158)
T ss_dssp SSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEE
T ss_pred hhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEE
Confidence 000000000000111122211 12222345555532 22 368888
Q ss_pred Ee----------CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccc
Q psy8152 205 CS----------KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGF 274 (444)
Q Consensus 205 ~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h 274 (444)
|+ ..|.|++|++. ....+.+.... ..+++++++-- +|++|++. ...|++|++.. .+.+..-..+
T Consensus 850 GTa~~~~~e~~~~~Gri~vf~v~-~~kL~lv~~~~-v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~-~~~L~~~~~~ 923 (1158)
T 3ei3_A 850 GTAMVYPEEAEPKQGRIVVFQYS-DGKLQTVAEKE-VKGAVYSMVEF-NGKLLASI--NSTVRLYEWTT-EKELRTECNH 923 (1158)
T ss_dssp EEEECCTTCSSCCCEEEEEEEEE-TTEEEEEEEEE-ESSCEEEEEEE-TTEEEEEE--TTEEEEEEECT-TSCEEEEEEE
T ss_pred EeeecCCCCCCCCceEEEEEEEE-CCEEEEEEEEE-cCCcCEEEeee-CCEEEEEc--CCEEEEEECCC-CceEEEEeec
Confidence 76 35899999997 22333333332 35677777643 45444433 46899999987 5544411112
Q ss_pred cCceeEEEecCCCCEEEEEECCCcEEEEEc--CCCceEEEe--ecCCceeEEEEcCCCcccccchhhhhccccccCCCcc
Q psy8152 275 AGCVKDIACPLNENLILSVSLDRHFRVHDF--HSKKLLRKD--YMQSRLTSILVRSDFSLENETKKEEQEHSEEKGDSDE 350 (444)
Q Consensus 275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~--~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~d~~i~ 350 (444)
...|..+.....+++++.|..-..|.++.. ..+++.... .....++++.+-.+ ..++.+..+|.+.
T Consensus 924 ~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~----------~t~l~aD~~gNl~ 993 (1158)
T 3ei3_A 924 YNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD----------DNFLGAENAFNLF 993 (1158)
T ss_dssp CCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET----------TEEEEEETTSEEE
T ss_pred cccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc----------CcEEEEcCCCcEE
Confidence 222333333335778999988888777654 344443332 35666777777543 2344455666666
Q ss_pred ccCCC
Q psy8152 351 KYDPE 355 (444)
Q Consensus 351 ~W~~~ 355 (444)
+....
T Consensus 994 vl~~~ 998 (1158)
T 3ei3_A 994 VCQKD 998 (1158)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 65443
No 319
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.73 E-value=0.0041 Score=54.41 Aligned_cols=164 Identities=11% Similarity=0.142 Sum_probs=104.4
Q ss_pred CeEEEEEeccCCEEEEee-CCCeEEEEEcCCceeee-eeecccceeeEeeeCCCcccccCccceeEEEE---ecCCCEEE
Q psy8152 129 QLECMKHNKHSNIIATGG-KENDLKLWDLNTTKNIF-SAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF---LPNSDKVA 203 (444)
Q Consensus 129 ~v~~~~~~~~~~~l~~~~-~d~~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~ 203 (444)
..-+++|++....|+.++ ..++|..|+...+.... .+....+ .......+..|.| .|++++++
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~------------~g~~~~~~sGl~~~~~D~~grL~v 81 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASS------------NGDGEQQMSGLSLLTHDNSKRLFA 81 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCC------------SSCCSEEEEEEEESSSSSCCEEEE
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccc------------cCCCcceeeEEEEeccCCCCcEEE
Confidence 345789988555555555 78999999987543322 2221110 0000113678999 58876666
Q ss_pred EEe-------------CCceEEEEEcCCCCCccceEEEeC-------------CCCCeeEEEEccCCCEEEEEcCC-CcE
Q psy8152 204 VCS-------------KQGYVRVYDPKITTQRRPVLKVDI-------------PDVALSCITTTNQSHYVIVGSTT-GDM 256 (444)
Q Consensus 204 ~~~-------------~d~~i~i~d~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~d-g~i 256 (444)
+.. .+..|..||+....+.+.+..... .......|+..++|+..++++.. +.|
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I 161 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI 161 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence 543 267899999772112344433321 11247789999999999988888 877
Q ss_pred EEEEcCCCCcceeEec------cccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 257 MAVDLRGKGKPCYKYK------GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 257 ~iwd~~~~~~~~~~~~------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
..++... +.+..+. ......+.|+++|++.+|++....|.|..+|+..
T Consensus 162 ~rV~pdG--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 162 ARVSADG--KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEECTTS--CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EEEeCCC--CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 7777653 3333322 1122367999999999888887799999999874
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.71 E-value=0.012 Score=52.83 Aligned_cols=234 Identities=8% Similarity=-0.019 Sum_probs=111.6
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccC---CcEEEEEEc-C-----CeEEEEeCCCCc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVE---ESELLIAYS-G-----QKIKIYDTDFKN 76 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~---~~~l~~~~~-d-----~~i~vw~~~~~~ 76 (444)
..|+++...|.|++++ .+. ...+..+... ........|+|+ |+ +..|+++.. . +.|..|+...+.
T Consensus 42 G~l~V~e~~g~I~~i~--~g~--~~~~~~~~v~~~g~~~p~gia~~-pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~ 116 (352)
T 2ism_A 42 GGMLIAERPGRIRLFR--EGR--LSTYAELSVYHRGESGLLGLALH-PRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGER 116 (352)
T ss_dssp SCEEEEETTTEEEEEE--TTE--EEEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEECTTSSEEEEEEEEECSSC
T ss_pred CeEEEEeCCCeEEEEE--CCC--ccEeecceEeecCCCCceeEEEC-CCCCCCCEEEEEEecCCCCCccEEEEEEeCCCC
Confidence 3477777779999888 333 1212222211 224567899999 56 455555443 2 578788776432
Q ss_pred c---ccc---ee---eccccccEEEEEeCCCeEEEEec-------------CCcEEEEEcCCC------------Ccccc
Q psy8152 77 F---NTN---TD---VSFGEGDIVGVSRYDECILTAVK-------------SGDVKLWRYKTE------------PDQWT 122 (444)
Q Consensus 77 ~---~~~---~~---~~~~~~~v~~~s~~~~~l~~~~~-------------dg~i~iw~~~~~------------~~~~~ 122 (444)
. ... +. ...|...-+.+.|+|.++++.+. .|.|.-++.... .....
T Consensus 117 ~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i 196 (352)
T 2ism_A 117 GVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEV 196 (352)
T ss_dssp EEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTE
T ss_pred cCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccE
Confidence 1 111 11 11244556778899976665432 145555554421 00101
Q ss_pred -ccccCCCeEEEEEec-cCCEEEEeeCCCeE------EEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 123 -NFNVGPQLECMKHNK-HSNIIATGGKENDL------KLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 123 -~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i------~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
..++ .....++|+| ++.++++-...+.+ .|.-+..+... -+...........+.+.-...........++
T Consensus 197 ~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~ny-Gwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~ 274 (352)
T 2ism_A 197 YSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNY-GWPRVVGRGNDPRYRDPLYFWPQGFPPGNLA 274 (352)
T ss_dssp EEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBC-CTTTCCSCCCCTTSCCCSEECTTCCCEEEEE
T ss_pred EEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcC-CCCcccCCCCCCCCcCCeEecCCCCCCcceE
Confidence 1112 2356788998 66655543332221 12222221100 0000000000000000000000112356777
Q ss_pred EecCCCEEEEEeCCceEEEEEcCCCCCccc------eEEEeCCCCCeeEEEEccCCCEEEEEc
Q psy8152 195 FLPNSDKVAVCSKQGYVRVYDPKITTQRRP------VLKVDIPDVALSCITTTNQSHYVIVGS 251 (444)
Q Consensus 195 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~ 251 (444)
| .++.++++....+.|...++. .... ...+......+..+++.|+|.++++..
T Consensus 275 ~-~~G~l~v~~~~~~~v~~v~~~---~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 275 F-FRGDLYVAGLRGQALLRLVLE---GERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp E-ETTEEEEEETTTTEEEEEEEE---EETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred E-ECCEEEEEECCCCEEEEEEEC---CCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 7 466777766677788888876 2211 122222235688999999997766653
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.70 E-value=0.0031 Score=56.94 Aligned_cols=238 Identities=11% Similarity=-0.001 Sum_probs=113.1
Q ss_pred CCcEEEEEEc-CCeEEEEeCCC--Cccccceeec-cccccEEEEEeCCCeEEEEec-C---------CcEEEEEcCCCCc
Q psy8152 54 EESELLIAYS-GQKIKIYDTDF--KNFNTNTDVS-FGEGDIVGVSRYDECILTAVK-S---------GDVKLWRYKTEPD 119 (444)
Q Consensus 54 ~~~~l~~~~~-d~~i~vw~~~~--~~~~~~~~~~-~~~~~v~~~s~~~~~l~~~~~-d---------g~i~iw~~~~~~~ 119 (444)
++..++.|+. ...+.+||+.+ .+....-..+ .......+...++.+++.|+. + ..+.+||+.+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 3566666654 35788898863 3333222212 111112223346777777765 2 4688899887654
Q ss_pred ccccccc-CCCeEEEEEeccCCEEEEeeCC---------------------------------------CeEEEEEcCCc
Q psy8152 120 QWTNFNV-GPQLECMKHNKHSNIIATGGKE---------------------------------------NDLKLWDLNTT 159 (444)
Q Consensus 120 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------------------------------~~i~vwd~~~~ 159 (444)
....... .......+...++++++.|+.+ ..+.+||+.+.
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 178 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ 178 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC
Confidence 3211101 1111111122467788888754 57888998875
Q ss_pred eeeeeeecccceeeEeeeCCCcccccCccce-eEEEEecCCCEEEEEeC------CceEEEEEcC-CCCCccceEEEeCC
Q psy8152 160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV-NGISFLPNSDKVAVCSK------QGYVRVYDPK-ITTQRRPVLKVDIP 231 (444)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~------d~~i~i~d~~-~~~~~~~~~~~~~~ 231 (444)
+-...-..... ... .+++.. ++++++.|+. ...+.+|++. .+.....+..+...
T Consensus 179 ~W~~~~~~p~~-----------------~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~ 240 (357)
T 2uvk_A 179 QWSYAGESPWY-----------------GTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSP 240 (357)
T ss_dssp EEEEEEECSSC-----------------CCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTT
T ss_pred cEEECCCCCCC-----------------CcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCC
Confidence 43322111100 011 233332 4566666654 2357778762 01222222222111
Q ss_pred CCCeeEEEEccCCCEEEEEcCC----------------------CcEEEEEcCCCCc--ceeEeccccCceeEEEecCCC
Q psy8152 232 DVALSCITTTNQSHYVIVGSTT----------------------GDMMAVDLRGKGK--PCYKYKGFAGCVKDIACPLNE 287 (444)
Q Consensus 232 ~~~i~~~~~~~~~~~l~~~~~d----------------------g~i~iwd~~~~~~--~~~~~~~h~~~i~~~~~s~~~ 287 (444)
.......+...++++++.|+.+ ..+.+||+.+ .+ .+..++.....-.++. .++
T Consensus 241 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~--~~~ 317 (357)
T 2uvk_A 241 DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN-GKWDKSGELSQGRAYGVSLP--WNN 317 (357)
T ss_dssp TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CEEEEECSSCCBSSEEEE--ETT
T ss_pred cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC-CceeeCCCCCCCcccceeEE--eCC
Confidence 1111211223356777777632 2477899876 43 2333332222212222 366
Q ss_pred CEEEEEECCC------cEEEEEcCCCceEEE
Q psy8152 288 NLILSVSLDR------HFRVHDFHSKKLLRK 312 (444)
Q Consensus 288 ~~l~s~~~dg------~i~vw~~~~~~~~~~ 312 (444)
++++.|+.++ .|.++++.+++.+..
T Consensus 318 ~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 318 SLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred EEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 7777887543 355668877776554
No 322
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.69 E-value=0.035 Score=51.89 Aligned_cols=237 Identities=9% Similarity=0.055 Sum_probs=130.0
Q ss_pred EEEEEcCCeEEEEeCCCCccccceeecc-------------------------c--cccEEEE---EeCCCeEEEEec-C
Q psy8152 58 LLIAYSGQKIKIYDTDFKNFNTNTDVSF-------------------------G--EGDIVGV---SRYDECILTAVK-S 106 (444)
Q Consensus 58 l~~~~~d~~i~vw~~~~~~~~~~~~~~~-------------------------~--~~~v~~~---s~~~~~l~~~~~-d 106 (444)
|.+|+..|.|+|+-+.+++.+..+.... . ..+-.++ ..+|++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 5678889999999998887666552100 0 1111222 246788887664 5
Q ss_pred CcEEEEEcCCCCccc-cccccCCCeEEEEEe--ccCCEEEEeeCC-------CeEEEEEcCCceeeeeeecccceeeEee
Q psy8152 107 GDVKLWRYKTEPDQW-TNFNVGPQLECMKHN--KHSNIIATGGKE-------NDLKLWDLNTTKNIFSAKNVSHRVLVYS 176 (444)
Q Consensus 107 g~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~--~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 176 (444)
..|...++...++-. ........+..++|. |+..+++.++.. |.. ..+...+... ...+
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~--~~~~~~~~y~---------~f~~ 221 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKV--FDLQDENSYT---------MYNA 221 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSC--CCTTSTTEEE---------EEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcc--cccCChhhce---------EEEE
Confidence 668888888777654 233466778899886 677788877752 221 0001100000 1111
Q ss_pred eCCCcccccCc----cceeEEEEecCCCEEEEEeCCc---------------eEEEEEcCC-----------CC------
Q psy8152 177 VKPDEFDLRRP----VWVNGISFLPNSDKVAVCSKQG---------------YVRVYDPKI-----------TT------ 220 (444)
Q Consensus 177 ~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~d~---------------~i~i~d~~~-----------~~------ 220 (444)
+.++.+....+ ...-.+...+++++.++.+.+. .+.++++.. ..
T Consensus 222 iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ 301 (638)
T 3sbq_A 222 IDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTP 301 (638)
T ss_dssp EETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCC
T ss_pred EcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCee
Confidence 12221111100 0122334455555655544321 344444320 00
Q ss_pred -----C----c-cceEEEeCCCCCeeEEEEccCCCEEEE-EcCCCcEEEEEcCCC-----Ccc-------eeEeccccCc
Q psy8152 221 -----Q----R-RPVLKVDIPDVALSCITTTNQSHYVIV-GSTTGDMMAVDLRGK-----GKP-------CYKYKGFAGC 277 (444)
Q Consensus 221 -----~----~-~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~-----~~~-------~~~~~~h~~~ 277 (444)
. . ..++.+. -......+.++|+|+++++ |-.+.++.++++... .+. ..... -.-.
T Consensus 302 ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlG 379 (638)
T 3sbq_A 302 VLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLG 379 (638)
T ss_dssp EEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSC
T ss_pred EEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCc
Confidence 1 1 1122222 2233467889999999887 456788999998740 111 12222 2234
Q ss_pred eeEEEecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152 278 VKDIACPLNENLILSVSLDRHFRVHDFHSK 307 (444)
Q Consensus 278 i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 307 (444)
....+|.++|....|.--|..|.-|++...
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred ccEEEECCCCceEeeeeecceEEEEeccHH
Confidence 567899999965556668999999999753
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.66 E-value=0.032 Score=50.56 Aligned_cols=235 Identities=8% Similarity=0.104 Sum_probs=147.2
Q ss_pred CcEEEEEE---cCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeE
Q psy8152 55 ESELLIAY---SGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLE 131 (444)
Q Consensus 55 ~~~l~~~~---~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~ 131 (444)
.+++.+-- ....|.|.|+..+........ .....-++|..+.||.-. ..++.|+|+.+.+.+. .......|.
T Consensus 35 DkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klk-s~~~~e~Vv 109 (494)
T 1bpo_A 35 DKFICIREKVGEQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-AHTMTDDVT 109 (494)
T ss_dssp TTEEEEEECCTTCCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEE-EEECSSCCC
T ss_pred CceEEEEecCCCCCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhc-ceecCCCce
Confidence 45555432 234799999987665543321 222233478777777665 6799999999988775 333455666
Q ss_pred EEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe----
Q psy8152 132 CMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS---- 206 (444)
Q Consensus 132 ~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---- 206 (444)
-=.|-. .+.|+..+ +..|+-|++.. ..+...+..|.. + ....|.....+++.++++..+
T Consensus 110 fWkWis-~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~-------------L-~~~QIInY~~d~~~kW~~l~GI~~~ 173 (494)
T 1bpo_A 110 FWKWIS-LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSS-------------L-AGCQIINYRTDAKQKWLLLTGISAQ 173 (494)
T ss_dssp EEEEEE-TTEEEEEC-SSEEEEEESSSSCCCEEEEECCGG-------------G-TTCEEEEEEECTTSSEEEEEEEEEE
T ss_pred EEEecC-CCeEEEEc-CCeeEEecccCCCCchhheecchh-------------c-ccceEEEEEECCCCCeEEEEeeccc
Confidence 667763 44565555 36899999975 345545544433 0 123577777788887776443
Q ss_pred ---CCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccC---CCEEEEEcC---CCcEEEEEcCCC--Cccee-----E
Q psy8152 207 ---KQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQ---SHYVIVGST---TGDMMAVDLRGK--GKPCY-----K 270 (444)
Q Consensus 207 ---~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~---dg~i~iwd~~~~--~~~~~-----~ 270 (444)
..|.+.+|... .+.-+.+.+|......+.+.-+ ..+++.+.. .+.++|.++..+ +.+.. .
T Consensus 174 ~~~v~G~mQLYS~e----r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vd 249 (494)
T 1bpo_A 174 QNRVVGAMQLYSVD----RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVD 249 (494)
T ss_dssp TTEEEEEEEEEEST----TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEE
T ss_pred CCcccceEEEeecc----ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeee
Confidence 25789999988 5556667787655444433211 123333333 378999998652 11111 1
Q ss_pred e--c--cccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 271 Y--K--GFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 271 ~--~--~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
+ + .......++..++.-..++.-+.-|.|++||+.++.++..-.
T Consensus 250 v~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 250 VFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp CCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 1 1 113344578888888889999999999999999999987654
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.65 E-value=0.014 Score=52.67 Aligned_cols=242 Identities=9% Similarity=0.006 Sum_probs=115.1
Q ss_pred CcccEEEecC-CCcEEEEEcCCCccceeeeeeecccC-cccceEEEeeeccCCcEEEEEEc-C---------CeEEEEeC
Q psy8152 5 DDYNIYIGSS-TGAFKGVNLSKDKCIIKNIQNVKYIT-NKASVLALNWGNVEESELLIAYS-G---------QKIKIYDT 72 (444)
Q Consensus 5 ~~~~l~~g~~-dg~i~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~~~~~-d---------~~i~vw~~ 72 (444)
++.+++.|+. ...+.+|++...... +..+..+. ....-.+++.. ++..++.|+. + ..+.+||+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~---W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKK---WTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNP 93 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCC---EEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCC---eeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence 3445555543 456778887642211 22222221 11111223333 3666666665 2 46889998
Q ss_pred CCCccccceeec-cccccEEEEEeCCCeEEEEecC---------------------------------------CcEEEE
Q psy8152 73 DFKNFNTNTDVS-FGEGDIVGVSRYDECILTAVKS---------------------------------------GDVKLW 112 (444)
Q Consensus 73 ~~~~~~~~~~~~-~~~~~v~~~s~~~~~l~~~~~d---------------------------------------g~i~iw 112 (444)
.+.+....-... .......++..++++++.|+.+ ..+.+|
T Consensus 94 ~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 94 KTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp TTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred CCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 876654432221 1122223334677788888754 468889
Q ss_pred EcCCCCccccc-cccCCCe-EEEEEeccCCEEEEeeC------CCeEEEEEc--CCceeeeeeecccceeeEeeeCCCcc
Q psy8152 113 RYKTEPDQWTN-FNVGPQL-ECMKHNKHSNIIATGGK------ENDLKLWDL--NTTKNIFSAKNVSHRVLVYSVKPDEF 182 (444)
Q Consensus 113 ~~~~~~~~~~~-~~~~~~v-~~~~~~~~~~~l~~~~~------d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (444)
|+.+.+..... ....... .+++.. ++.+++.|+. ...+.+|++ .+.+-.. +..... |
T Consensus 174 d~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~-~~~~~~--------~--- 240 (357)
T 2uvk_A 174 DPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK-LAPVSS--------P--- 240 (357)
T ss_dssp ETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEE-CCCSST--------T---
T ss_pred eCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEe-cCCCCC--------C---
Confidence 98776543211 1111111 222222 5667777764 234666776 3322111 111000 0
Q ss_pred cccCccceeEEEEecCCCEEEEEeCC----------------------ceEEEEEcCCCCCccceEEEeCCCCCeeEEEE
Q psy8152 183 DLRRPVWVNGISFLPNSDKVAVCSKQ----------------------GYVRVYDPKITTQRRPVLKVDIPDVALSCITT 240 (444)
Q Consensus 183 ~~~~~~~i~~~~~~~~~~~l~~~~~d----------------------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~ 240 (444)
.......+...++++++.|+.+ ..+.+||+. ......+..+......-.++
T Consensus 241 ----~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~-- 313 (357)
T 2uvk_A 241 ----DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH-NGKWDKSGELSQGRAYGVSL-- 313 (357)
T ss_dssp ----TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CEEEEECSSCCBSSEEE--
T ss_pred ----cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC-CCceeeCCCCCCCcccceeE--
Confidence 0011111223356777777632 257889988 44555554444332222222
Q ss_pred ccCCCEEEEEcCCC------cEEEEEcCCCCcceeEec
Q psy8152 241 TNQSHYVIVGSTTG------DMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 241 ~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~ 272 (444)
..++++++.|+.++ .|.+++++. ++.+...+
T Consensus 314 ~~~~~i~v~GG~~~~~~~~~~v~~l~~~~-~~~~~~~~ 350 (357)
T 2uvk_A 314 PWNNSLLIIGGETAGGKAVTDSVLITVKD-NKVTVQNL 350 (357)
T ss_dssp EETTEEEEEEEECGGGCEEEEEEEEEC-C-CSCEEEC-
T ss_pred EeCCEEEEEeeeCCCCCEeeeEEEEEEcC-cEeEeeec
Confidence 33677888887553 356668877 66554433
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.59 E-value=0.0067 Score=53.70 Aligned_cols=224 Identities=14% Similarity=0.085 Sum_probs=107.3
Q ss_pred EEEEEEcCCeEEEEeCCCCccccceeecc--ccccEEEEEeCCCeEEEEec----CC-------cEEEEEcCCCCccccc
Q psy8152 57 ELLIAYSGQKIKIYDTDFKNFNTNTDVSF--GEGDIVGVSRYDECILTAVK----SG-------DVKLWRYKTEPDQWTN 123 (444)
Q Consensus 57 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~v~~~s~~~~~l~~~~~----dg-------~i~iw~~~~~~~~~~~ 123 (444)
.++.|+. .+.+||..+.+... ..... .......+..++.+++.|+. ++ .+.+||..+.+... +
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~ 93 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-L 93 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-C
T ss_pred hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-C
Confidence 3444443 48889988777644 22211 11122233456777788873 11 16778877665432 1
Q ss_pred cccCCC--eEEEEEeccCCEEEEeeCC-------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEE
Q psy8152 124 FNVGPQ--LECMKHNKHSNIIATGGKE-------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGIS 194 (444)
Q Consensus 124 ~~~~~~--v~~~~~~~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 194 (444)
.....+ -.+++.. ++.+++.|+.+ ..+.+||+.+.+-...-..... ..-.+++
T Consensus 94 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-----------------r~~~~~~ 155 (318)
T 2woz_A 94 PPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK-----------------VYGHNVI 155 (318)
T ss_dssp SCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC-----------------EESCEEE
T ss_pred CCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc-----------------ccccEEE
Confidence 111111 1122222 66777777754 3477888876543221110000 0011222
Q ss_pred EecCCCEEEEEeC------CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC-----CcEEEEEcCC
Q psy8152 195 FLPNSDKVAVCSK------QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT-----GDMMAVDLRG 263 (444)
Q Consensus 195 ~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 263 (444)
. .++++++.|+. -..+.+||+. +.....+..+...... .+++. -++++++.|+.+ ..+.+||+.+
T Consensus 156 ~-~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 156 S-HNGMIYCLGGKTDDKKCTNRVFIYNPK-KGDWKDLAPMKTPRSM-FGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp E-ETTEEEEECCEESSSCBCCCEEEEETT-TTEEEEECCCSSCCBS-CEEEE-ETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred E-ECCEEEEEcCCCCCCCccceEEEEcCC-CCEEEECCCCCCCccc-ceEEE-ECCEEEEEcCcCCCCccceEEEEECCC
Confidence 2 35667777764 2358899988 2233333222211111 22222 256777777643 3477889876
Q ss_pred CCcc--eeEeccccCceeEEEecCCCCEEEEEECC--------------CcEEEEEcCCCce
Q psy8152 264 KGKP--CYKYKGFAGCVKDIACPLNENLILSVSLD--------------RHFRVHDFHSKKL 309 (444)
Q Consensus 264 ~~~~--~~~~~~h~~~i~~~~~s~~~~~l~s~~~d--------------g~i~vw~~~~~~~ 309 (444)
.+- +..++........+. .++++++.|+.+ ..+.+||+.+.+-
T Consensus 232 -~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 232 -NKWEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp -CCEEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred -CeEEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 431 112221111112222 245666666653 3477777776543
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.53 E-value=0.029 Score=50.17 Aligned_cols=193 Identities=13% Similarity=0.148 Sum_probs=104.5
Q ss_pred eEEEeeeccCCcEEEEEE-------------cCCeEEEEeCCC--Cccccceeecc-----ccccEEEEE--e--CCC-e
Q psy8152 45 VLALNWGNVEESELLIAY-------------SGQKIKIYDTDF--KNFNTNTDVSF-----GEGDIVGVS--R--YDE-C 99 (444)
Q Consensus 45 v~~~~~~~~~~~~l~~~~-------------~d~~i~vw~~~~--~~~~~~~~~~~-----~~~~v~~~s--~--~~~-~ 99 (444)
.-.+... +++ ++++++ .+|.|.++|..+ ++. ..+...+ .......++ + ++. +
T Consensus 52 ~EDi~~~-~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 52 SEDLEIL-PNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCEEEEC-TTS-EEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred cceeEEc-CCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 4556667 555 444444 689999999873 222 2233222 122334443 3 344 3
Q ss_pred EEEEe-c--CCcEEEEEcCCCCcccccc----c-cCCCeEEEEEeccCCEEEEeeC-----------------CCeEEEE
Q psy8152 100 ILTAV-K--SGDVKLWRYKTEPDQWTNF----N-VGPQLECMKHNKHSNIIATGGK-----------------ENDLKLW 154 (444)
Q Consensus 100 l~~~~-~--dg~i~iw~~~~~~~~~~~~----~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~vw 154 (444)
|+++. . ..+|.+|++........+. + .-...+.+++.++|.+.++... .|.|..+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 44442 2 4678888876542221111 1 1235788999999887776531 2334444
Q ss_pred EcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE-eCCceEEEEEcCCCCCccceEEEeCCCC
Q psy8152 155 DLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC-SKQGYVRVYDPKITTQRRPVLKVDIPDV 233 (444)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 233 (444)
+. ++......... ..+.++|+|+++.|+++ +..+.|+.|++...+.......+. ...
T Consensus 209 d~--~~~~~~~~~l~-------------------~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g 266 (355)
T 3sre_A 209 SP--NDVRVVAEGFD-------------------FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDT 266 (355)
T ss_dssp CT--TCCEEEEEEES-------------------SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSS
T ss_pred EC--CeEEEeecCCc-------------------ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCC
Confidence 43 22211111111 37899999999776655 567899999987212222222332 235
Q ss_pred CeeEEEEcc-CCCEEEEEcCC-CcEEEEEcC
Q psy8152 234 ALSCITTTN-QSHYVIVGSTT-GDMMAVDLR 262 (444)
Q Consensus 234 ~i~~~~~~~-~~~~l~~~~~d-g~i~iwd~~ 262 (444)
..-.+++.+ +|++.+++..+ +.|..|+..
T Consensus 267 ~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 267 LVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 567889998 58877765433 344444443
No 327
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.42 E-value=0.03 Score=50.60 Aligned_cols=146 Identities=9% Similarity=0.059 Sum_probs=91.9
Q ss_pred cCCEEEEeeCCCeEEEEEcCCceeeeeeeccc--ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEE
Q psy8152 138 HSNIIATGGKENDLKLWDLNTTKNIFSAKNVS--HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYD 215 (444)
Q Consensus 138 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 215 (444)
++..++.+- ++.||.-++......+.++... . -..|..+..+|+|++||..+. ..|.|..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~----------------f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~ 92 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLV----------------LDDTFHVISSTSGDLLCLFND-NEIFVME 92 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCC----------------CCTTCEEEECTTSSEEEEECS-SEEEEEE
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccc----------------cCceeEEEECCCCCEEEEecC-CeEEEEE
Confidence 555555544 3677877776433233332221 1 013788999999999998754 5888888
Q ss_pred cCCCC---C------ccceEEEeC------CCCCeeEEEEccC---CCEEEEEcCCCcEEEEEcCCC-CcceeEec----
Q psy8152 216 PKITT---Q------RRPVLKVDI------PDVALSCITTTNQ---SHYVIVGSTTGDMMAVDLRGK-GKPCYKYK---- 272 (444)
Q Consensus 216 ~~~~~---~------~~~~~~~~~------~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~---- 272 (444)
+.... . ....+.+.. ...+|..+.|+|- +..|++-..|+.|++||+... .++. .+.
T Consensus 93 LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~ 171 (452)
T 3pbp_A 93 VPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN 171 (452)
T ss_dssp CCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS
T ss_pred ecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc
Confidence 87110 1 011223332 2567999999995 568999999999999999851 2223 332
Q ss_pred -----cccCceeEEEecCCCCEEEEEE--CCCcEEEE
Q psy8152 273 -----GFAGCVKDIACPLNENLILSVS--LDRHFRVH 302 (444)
Q Consensus 273 -----~h~~~i~~~~~s~~~~~l~s~~--~dg~i~vw 302 (444)
.....|.+++|.+++-.|...+ ..|-|+-.
T Consensus 172 ~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 172 SFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 1225688899988776666644 66777643
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.00061 Score=60.39 Aligned_cols=113 Identities=8% Similarity=-0.029 Sum_probs=74.0
Q ss_pred CcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEE-e---CCCeEEEE--ecCCcEEEEEcCCCCccccccc---
Q psy8152 55 ESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVS-R---YDECILTA--VKSGDVKLWRYKTEPDQWTNFN--- 125 (444)
Q Consensus 55 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s-~---~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~--- 125 (444)
+..+++++.||.|+-+|..+|+.+..+... ...+..... + .+..++.+ +.||.|..++..+|...+.+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 568899999999999999999998887643 212333321 1 12234433 5899999999887754331110
Q ss_pred -cCCCeEE---EEE-----eccCCEEEEeeCCCeEEEEEcCCceeeeeeecc
Q psy8152 126 -VGPQLEC---MKH-----NKHSNIIATGGKENDLKLWDLNTTKNIFSAKNV 168 (444)
Q Consensus 126 -~~~~v~~---~~~-----~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 168 (444)
...++.. ... ...+..+++|+.+|.+...|+.+|+.+..+...
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 1222221 000 003567899999999999999999999888643
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.0011 Score=58.68 Aligned_cols=201 Identities=8% Similarity=0.027 Sum_probs=112.2
Q ss_pred CeEEEEecCCcEEEEEcCCCCcccccccc-CCCeEEEEEe--c-cCCEEEEe-eCCCeEEEEEcCCceeeeeeeccccee
Q psy8152 98 ECILTAVKSGDVKLWRYKTEPDQWTNFNV-GPQLECMKHN--K-HSNIIATG-GKENDLKLWDLNTTKNIFSAKNVSHRV 172 (444)
Q Consensus 98 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~ 172 (444)
.++++++.||.|+-+|..+|+.++.+... ..++....-. + ++..++.. +.||.|..++..+|.....+....-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l-- 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL-- 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH--
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc--
Confidence 46888999999999999999888755433 1222221111 1 22334443 6899999999988865544432211
Q ss_pred eEeeeCCCcccccCccceeE---EEE-----ecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCC--C-----eeE
Q psy8152 173 LVYSVKPDEFDLRRPVWVNG---ISF-----LPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDV--A-----LSC 237 (444)
Q Consensus 173 ~~~~~~~~~~~~~~~~~i~~---~~~-----~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~-----i~~ 237 (444)
...+ ++.. ... ...+..+++|+.++++...|++ +++.+..+..... . ..|
T Consensus 89 --v~~S----------P~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~---tG~~~W~~~~~~~~~~~~~~~e~~ 153 (339)
T 2be1_A 89 --VSTS----------PLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINML---NGEIISAFGPGSKNGYFGSQSVDC 153 (339)
T ss_dssp --HTTC----------SEEEECC----------CCEEEEECEEEEEEEEEETT---TCCEEEEESTTCBCC---------
T ss_pred --eecc----------ccccCCCceeecccccccCCEEEEEecCCEEEEEECC---CCcEEEEEecCCCccccccccccc
Confidence 0000 1110 000 0134678899999999999999 8888887764321 0 011
Q ss_pred EEEc-----cCCCEEEEEcCCCcEEEEEcCCCCcceeEec-----cccC--ce-eEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 238 ITTT-----NQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-----GFAG--CV-KDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 238 ~~~~-----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~h~~--~i-~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
.... -.+..|+.+..+..+.+.+ ++ ++ +..+. .+.. ++ .+-..+.++.+ +.++.||.|..+|.
T Consensus 154 ~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~s-G~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~ 229 (339)
T 2be1_A 154 SPEEKIKLQECENMIVIGKTIFELGIHS-YD-GA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDL 229 (339)
T ss_dssp -----------CCEEEEEEEEEECEECC-TT-SC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECS
T ss_pred ccccccccccCCCeEEEecceEEEEEEC-CC-CC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEEC
Confidence 1111 1235677777777777666 44 53 33222 1000 00 00011234555 45788999999999
Q ss_pred CCCceEE-EeecCCce
Q psy8152 305 HSKKLLR-KDYMQSRL 319 (444)
Q Consensus 305 ~~~~~~~-~~~~~~~i 319 (444)
.+|+.+. +.....++
T Consensus 230 ~~G~~~W~~~~l~sPv 245 (339)
T 2be1_A 230 DFRIARWVSPTFPGII 245 (339)
T ss_dssp TTCCEEEECCCCSSCE
T ss_pred CCCcEEEEeecCCCCe
Confidence 9988877 44455554
No 330
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.32 E-value=0.084 Score=47.38 Aligned_cols=60 Identities=17% Similarity=0.173 Sum_probs=41.1
Q ss_pred CCeeEEEEcc-------CCCEEEEEcCCCcEEEEEcCCCCcceeE--e-ccccCceeEEEecCCCCEEEEE
Q psy8152 233 VALSCITTTN-------QSHYVIVGSTTGDMMAVDLRGKGKPCYK--Y-KGFAGCVKDIACPLNENLILSV 293 (444)
Q Consensus 233 ~~i~~~~~~~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~-~~h~~~i~~~~~s~~~~~l~s~ 293 (444)
..+..++|.+ +++++++....+.|...++.. ++.+.. + ......+..+++.|+|.++++.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNG-DKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEET-TEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCC-CeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 3467788863 577888877788888888876 654432 2 2223578899999999866543
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.31 E-value=0.034 Score=45.41 Aligned_cols=181 Identities=8% Similarity=-0.107 Sum_probs=93.7
Q ss_pred CCeEEEEecCCcEEEEEcCCCCc-c----cccccc--CCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeeccc
Q psy8152 97 DECILTAVKSGDVKLWRYKTEPD-Q----WTNFNV--GPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVS 169 (444)
Q Consensus 97 ~~~l~~~~~dg~i~iw~~~~~~~-~----~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 169 (444)
..+|+....| +|+.=....+.. . .+..+. -..+..++|+|++.+.++ .+|.+.-.+..+.... .+....
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcc-cccccc
Confidence 3456666666 555544443331 0 012223 246789999998886666 6677666665442211 000001
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccc----eEEEeCCCCCeeEEEEccCCC
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRP----VLKVDIPDVALSCITTTNQSH 245 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~ 245 (444)
..+-.. ... .-.++.|.|+|.+.++ .||.|+-++..++....- ...-...-..+..|.|.|+|.
T Consensus 80 t~IG~~---------Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~ 147 (236)
T 1tl2_A 80 KKIGNG---------GWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY 147 (236)
T ss_dssp EEEECS---------CGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC
T ss_pred cEeccc---------ccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce
Confidence 100000 000 1378899999988877 558888777641111110 111111224578999999998
Q ss_pred EEEEEcCCCcEEEEEcCCCCcc-----eeEe-c-cccCceeEEEecCCCCEEEEEECCCc
Q psy8152 246 YVIVGSTTGDMMAVDLRGKGKP-----CYKY-K-GFAGCVKDIACPLNENLILSVSLDRH 298 (444)
Q Consensus 246 ~l~~~~~dg~i~iwd~~~~~~~-----~~~~-~-~h~~~i~~~~~s~~~~~l~s~~~dg~ 298 (444)
+.++. ++.++-+...+ ... ..+. - .....-+.+.|.+++.+.++. ++.
T Consensus 148 Lyav~--dg~lyr~~~P~-~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 148 LYAVH--GQQFYKALPPV-SNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp EEEEE--TTEEEEECCCS-STTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred EEEEe--CCcEEecCCCC-CCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 77666 77754433222 110 1111 1 222234456788888766665 663
No 332
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.19 E-value=0.12 Score=46.42 Aligned_cols=230 Identities=13% Similarity=0.099 Sum_probs=112.0
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeeccc-CcccceEEEeeeccC---CcEEEEEEc----C----CeEEEEeCCC
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-TNKASVLALNWGNVE---ESELLIAYS----G----QKIKIYDTDF 74 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~---~~~l~~~~~----d----~~i~vw~~~~ 74 (444)
..|+++...|.|++++. .++ ..+..+... ........|+|+ |+ +..|+++.. + +.|..|+...
T Consensus 40 G~l~V~e~~g~I~~~d~-~G~---~~~~~~~v~~~g~~g~~gia~~-pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 40 GRYLVTERPGRLVLISP-SGK---KLVASFDVANVGEAGLLGLALH-PEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDG 114 (354)
T ss_dssp TEEEEEETTTEEEEECS-SCE---EEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEEECGGGCEEEEEEEEEECS
T ss_pred CeEEEEeCCCEEEEEeC-CCc---eEeeccceeecCCCceeeEEeC-CCCCcCCEEEEEEeccCCCCCcceEEEEEEECC
Confidence 34677777788888862 332 112222111 223567899999 55 455554433 2 5677777654
Q ss_pred C--cc---ccc---ee-eccccccEEEEEeCCCeEEEEec-------------CCcEEEEEcCCCC-------cccc-cc
Q psy8152 75 K--NF---NTN---TD-VSFGEGDIVGVSRYDECILTAVK-------------SGDVKLWRYKTEP-------DQWT-NF 124 (444)
Q Consensus 75 ~--~~---~~~---~~-~~~~~~~v~~~s~~~~~l~~~~~-------------dg~i~iw~~~~~~-------~~~~-~~ 124 (444)
. .. ... +. ...|...-+.|.|+|.++++.+. .|.|.-++....- .... ..
T Consensus 115 ~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~ 194 (354)
T 3a9g_A 115 STFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSY 194 (354)
T ss_dssp SSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEE
T ss_pred CCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEE
Confidence 3 11 111 11 11344555778899987666432 1345555443210 0001 11
Q ss_pred ccCCCeEEEEEec-cCCEEEEeeCCC---eEEEEEcCCcee----eeeeecccceeeEeeeCCCcccc-cCccceeEEEE
Q psy8152 125 NVGPQLECMKHNK-HSNIIATGGKEN---DLKLWDLNTTKN----IFSAKNVSHRVLVYSVKPDEFDL-RRPVWVNGISF 195 (444)
Q Consensus 125 ~~~~~v~~~~~~~-~~~~l~~~~~d~---~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~ 195 (444)
++ .....++|+| ++.++++-...+ .|.+. ..+.. ...-....... ..|. ... .....+..++|
T Consensus 195 G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~----~~p~-~~~~~~~~ap~G~~~ 266 (354)
T 3a9g_A 195 GH-RNPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGNYGWPLATGKAGRGEF----VDPV-IDTGSETWAPSGASF 266 (354)
T ss_dssp CC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCBCCTTTCCSCCCCTTS----CCCS-EECTTCCCCEEEEEE
T ss_pred cc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCcCCCCcccCCCCCCCC----cCCE-eecCCCCcCCcceEE
Confidence 22 2356789998 666555433221 12222 21110 00000000000 0000 000 01124677888
Q ss_pred e-------cCCCEEEEEeCCceEEEEEcCCCCCccc--eEEEe-CCCCCeeEEEEccCCCEEEEEc
Q psy8152 196 L-------PNSDKVAVCSKQGYVRVYDPKITTQRRP--VLKVD-IPDVALSCITTTNQSHYVIVGS 251 (444)
Q Consensus 196 ~-------~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~l~~~~ 251 (444)
. .++.++++....+.|...++. ..... ...+. .....+..+++.|+|.+.++..
T Consensus 267 y~g~~fp~~~G~l~v~~~~~~~v~~~~~~--~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 267 VHGDMFPGLRGWLLIACLRGSMLAAVNFG--DNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCSSSCGGGTTEEEEEETTTTEEEEEEEC--GGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ECCCCCcccCCcEEEEEcCCCEEEEEEEC--CCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 3 466777776777889888887 11112 12232 2245688999999997666654
No 333
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.13 E-value=0.13 Score=45.87 Aligned_cols=189 Identities=12% Similarity=0.094 Sum_probs=102.3
Q ss_pred cCCcEEEEEcCCC--Cccc-cccc-----cCCCeEEEEEec--cCC-EEEEe-eC--CCeEEEEEcCCce-eeeeeeccc
Q psy8152 105 KSGDVKLWRYKTE--PDQW-TNFN-----VGPQLECMKHNK--HSN-IIATG-GK--ENDLKLWDLNTTK-NIFSAKNVS 169 (444)
Q Consensus 105 ~dg~i~iw~~~~~--~~~~-~~~~-----~~~~v~~~~~~~--~~~-~l~~~-~~--d~~i~vwd~~~~~-~~~~~~~~~ 169 (444)
.+|.|.++|+.+. +... .+.+ .......+.+.+ ++. +|+++ .. ..+|.+|++.... ....+....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6889999998743 2221 1111 223566777765 343 33333 22 4567777765532 111111111
Q ss_pred ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-----------------CceEEEEEcCCCCCccceEEEeCCC
Q psy8152 170 HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-----------------QGYVRVYDPKITTQRRPVLKVDIPD 232 (444)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~~~~~~~ 232 (444)
+ ..-...+.+.+.++|.++++... .|.|..++.. . +..+...-
T Consensus 161 g--------------~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~---~---~~~~~~~l 220 (355)
T 3sre_A 161 H--------------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN---D---VRVVAEGF 220 (355)
T ss_dssp C--------------TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT---C---CEEEEEEE
T ss_pred c--------------CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC---e---EEEeecCC
Confidence 1 00124789999999987776541 2344444432 2 22222222
Q ss_pred CCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCCcc--eeEeccccCceeEEEecC-CCCEEEEEECC-CcEEEEEcC--
Q psy8152 233 VALSCITTTNQSHYVIVG-STTGDMMAVDLRGKGKP--CYKYKGFAGCVKDIACPL-NENLILSVSLD-RHFRVHDFH-- 305 (444)
Q Consensus 233 ~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~--~~~~~~h~~~i~~~~~s~-~~~~l~s~~~d-g~i~vw~~~-- 305 (444)
...+.++|+|++++|+.+ +..+.|+.|++...+.. ...+ ...+..-.+++.+ +|++.+++..+ +.|..|+..
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~ 299 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENP 299 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSC
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCC
Confidence 346889999999877765 45788999998742322 1233 2245567889998 58877766544 344444433
Q ss_pred CCceEEEee
Q psy8152 306 SKKLLRKDY 314 (444)
Q Consensus 306 ~~~~~~~~~ 314 (444)
.+..+.++.
T Consensus 300 ~~s~v~rI~ 308 (355)
T 3sre_A 300 PGSEVLRIQ 308 (355)
T ss_dssp CCEEEEEEE
T ss_pred CCCEEEEEE
Confidence 234444443
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.06 E-value=0.13 Score=53.86 Aligned_cols=242 Identities=9% Similarity=0.063 Sum_probs=139.0
Q ss_pred eeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEe-CCCeEEEEecCCcEEEEEcCCC-Ccccccccc-
Q psy8152 50 WGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSR-YDECILTAVKSGDVKLWRYKTE-PDQWTNFNV- 126 (444)
Q Consensus 50 ~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~-~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~- 126 (444)
.+ |..+.||.-. ..++.|+++.+...++.+.. ...|.-+.| +.+.|+..+ +..|+.|++... .++..+..|
T Consensus 73 Mn-P~~~iiALra-g~~lQiFnl~~k~klks~~~---~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 73 MN-PASKVIALKA-GKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred cC-CCcceEEEec-CCeEEEeehHHhhhhccccc---CCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 45 5666666654 58999999998888887754 345665555 344454443 358999999642 344333334
Q ss_pred ---CCCeEEEEEeccCCEEEEee-------CCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe
Q psy8152 127 ---GPQLECMKHNKHSNIIATGG-------KENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL 196 (444)
Q Consensus 127 ---~~~v~~~~~~~~~~~l~~~~-------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 196 (444)
...|..-..+++.++++..| -.|.+.+|.+..+. .+.+.+|......+.+... ..+..+.|.+.-
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~----~~~~~l~~f~~~ 221 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGN----AEESTLFCFAVR 221 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCC----CCCceEEEEEEe
Confidence 45677778888888877544 34788888887532 2334444442211111110 011123333322
Q ss_pred cCCCEEEEEeCCceEEEEEcCCCCCccceE------EEeC---CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc
Q psy8152 197 PNSDKVAVCSKQGYVRVYDPKITTQRRPVL------KVDI---PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP 267 (444)
Q Consensus 197 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 267 (444)
. ...+.++|.++.....+.+.. .+.. ......++..++.-..++.-+.-|.|++||+.+ +.+
T Consensus 222 ~--------~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t-~~~ 292 (1630)
T 1xi4_A 222 G--------QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET-GTC 292 (1630)
T ss_pred c--------CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEeccc-chh
Confidence 1 012688898886210111111 1111 122334677788777888889999999999999 988
Q ss_pred eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEE
Q psy8152 268 CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLR 311 (444)
Q Consensus 268 ~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 311 (444)
+..-+-...+|...+-+....-+++....|.|.--.+....++.
T Consensus 293 i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~ 336 (1630)
T 1xi4_A 293 IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 336 (1630)
T ss_pred hhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhh
Confidence 87655444445444444333334444567766666666555444
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.04 E-value=0.32 Score=48.72 Aligned_cols=260 Identities=11% Similarity=0.058 Sum_probs=139.9
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeec
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVS 84 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~ 84 (444)
....|..|+.+| |..||-..- ..+..... .....|.++... . ...|..|+.+ -+..||..+.+......
T Consensus 31 ~~G~lWigT~~G-L~ryDG~~~----~~~~~~~~-~~~~~i~~i~~d-~-~g~lWigT~~-Gl~~yd~~~~~f~~~~~-- 99 (758)
T 3ott_A 31 SEGLIWIGSNKG-LFSYDGYST----QQHFTYGE-NNNTRIYCGVII-D-NTYLYMGTDN-GILVYNYRADRYEQPET-- 99 (758)
T ss_dssp TTSCEEEEESSC-EEEECSSCE----EECSCTTS-TTSSCEEEEEEE-T-TTEEEEEETT-EEEEEETTTTEECCCSC--
T ss_pred CCCCEEEEECCC-ccccCCCce----EEEEccCC-CCCceEEEEEEc-C-CCcEEEEeCC-CeEEEeCCCCEEECccc--
Confidence 345677777666 344542111 11111111 124568888776 3 4567777765 47899987765443111
Q ss_pred cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccccc-----ccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCc
Q psy8152 85 FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWTNF-----NVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTT 159 (444)
Q Consensus 85 ~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~ 159 (444)
.....|.++......|..++.+ -|..++..+++... +. .....|.++...+++.+.+ |+.. -|..++..++
T Consensus 100 ~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~ 175 (758)
T 3ott_A 100 DFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTS-FDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNG 175 (758)
T ss_dssp CCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEE-ECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTT
T ss_pred CCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEE-eccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCC
Confidence 1123455554334456666665 67888887665432 20 1234588888777666554 4444 4777887765
Q ss_pred eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEE
Q psy8152 160 KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCIT 239 (444)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 239 (444)
+... +..... . ......|.++...+++..|..|+. +-|..++.. .........+ ....|.++.
T Consensus 176 ~~~~-~~~~~~-----------~-~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~-~~~~~~~~~l--~~~~i~~i~ 238 (758)
T 3ott_A 176 KFEG-IPLPVH-----------S-SQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPS-TGQIKQTEAF--HNNSIKSLA 238 (758)
T ss_dssp EEEE-ECCCCC-----------T-TCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETT-TTEEEEEEEE--EEEEEEEEE
T ss_pred ceEE-ecCCCc-----------c-ccccceeEEEEEECCCCEEEEEEC-CCCeEEcCC-CCeEEeccCC--CCCeEEEEE
Confidence 4321 111000 0 000124788888777665555554 468888876 1111122222 233578888
Q ss_pred EccCCCEEEEEcCCCcEEEEEcCCCCcceeEecc--------ccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152 240 TTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKG--------FAGCVKDIACPLNENLILSVSLDRHFRVH 302 (444)
Q Consensus 240 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------h~~~i~~~~~s~~~~~l~s~~~dg~i~vw 302 (444)
..++|.+.+ |+.. -+.+++..+ ... ..+.. ....|.++....+|.+-+ |+..| +.++
T Consensus 239 ~d~~g~lWi-gT~~-Gl~~~~~~~-~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~ 303 (758)
T 3ott_A 239 LDGNGDLLA-GTDN-GLYVYHNDT-TPL-QHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLS 303 (758)
T ss_dssp ECTTCCEEE-EETT-EEEEECCTT-SCC-EEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEE
T ss_pred EcCCCCEEE-EeCC-ceeEEecCC-CcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-cccc
Confidence 887776655 4444 478888765 432 22221 124588888877776443 44556 5444
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.95 E-value=0.074 Score=52.61 Aligned_cols=196 Identities=12% Similarity=0.110 Sum_probs=101.5
Q ss_pred CCcEEEEEEcC----CeEEEEeCCCCccccce-e-----eccccccEEEEEe--CCCeEEEEecC------CcEEEEEcC
Q psy8152 54 EESELLIAYSG----QKIKIYDTDFKNFNTNT-D-----VSFGEGDIVGVSR--YDECILTAVKS------GDVKLWRYK 115 (444)
Q Consensus 54 ~~~~l~~~~~d----~~i~vw~~~~~~~~~~~-~-----~~~~~~~v~~~s~--~~~~l~~~~~d------g~i~iw~~~ 115 (444)
++..++.|+.+ ..+.+||..+++....- . .+.......+... ++.+++.|+.+ ..+.+||+.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 46677777653 46888998877654432 1 1111111222333 77777777754 357888887
Q ss_pred CCCccccc-cccCCCeEEEEEeccCCEEEEeeCCC--eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeE
Q psy8152 116 TEPDQWTN-FNVGPQLECMKHNKHSNIIATGGKEN--DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNG 192 (444)
Q Consensus 116 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (444)
+.+....- ......-.+++...++.+++.|+.++ .+.+||+.+..-...-. ... .| .......+
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~-~g~-------~p-----~~r~~~~a 543 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP-KDE-------FF-----QNSLVSAG 543 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC-SSG-------GG-----GSCCBSCE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC-CCC-------CC-----CcccceeE
Confidence 75433210 11111112233324788888888654 68899988755322111 000 00 00112233
Q ss_pred EEEecC-CCEEEEEeC--C-----ceEEEEEcCCCCC------ccceEEEeCCCCCeeEEEEccCCCEEEEEcC------
Q psy8152 193 ISFLPN-SDKVAVCSK--Q-----GYVRVYDPKITTQ------RRPVLKVDIPDVALSCITTTNQSHYVIVGST------ 252 (444)
Q Consensus 193 ~~~~~~-~~~l~~~~~--d-----~~i~i~d~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------ 252 (444)
+.+... +++++.|+. + ..+.+||+. ... ...+.........-.+++...++++++.|+.
T Consensus 544 ~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~-~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~ 622 (695)
T 2zwa_A 544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD-AENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLF 622 (695)
T ss_dssp EEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC-TTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCC
T ss_pred EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc-CCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCC
Confidence 555555 567777765 2 468899998 222 1222221111111123333333677777774
Q ss_pred --CCcEEEEEcCC
Q psy8152 253 --TGDMMAVDLRG 263 (444)
Q Consensus 253 --dg~i~iwd~~~ 263 (444)
...|.+||+.+
T Consensus 623 ~~~~~v~~yd~~t 635 (695)
T 2zwa_A 623 DRTNSIISLDPLS 635 (695)
T ss_dssp CTTTSEEEEETTT
T ss_pred CCCCeEEEEECCC
Confidence 34689999987
No 337
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.90 E-value=0.19 Score=43.88 Aligned_cols=182 Identities=6% Similarity=-0.026 Sum_probs=101.6
Q ss_pred EeeeccCCcEEEEEEcC--------------CeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEe--cC--CcE
Q psy8152 48 LNWGNVEESELLIAYSG--------------QKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAV--KS--GDV 109 (444)
Q Consensus 48 ~~~~~~~~~~l~~~~~d--------------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~--~d--g~i 109 (444)
--++ +++++|+-+... ..|+..++..++..... ......+++++++|+-.. .+ ..|
T Consensus 58 ~~i~-~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~-----~~~~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYIN-ADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD-----PDPCIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEE-ECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE-----CSCEEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEE-EcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee-----cCCccEEEEeCCEEEEEeecCCCCceE
Confidence 3456 678888876543 35777777766533322 234457888999888775 33 445
Q ss_pred EEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeC-CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcc
Q psy8152 110 KLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPV 188 (444)
Q Consensus 110 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (444)
...++...... .+..+.. .+|+++++.|+-.+. ...|.+.++..+.....+. .
T Consensus 132 y~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~------------------ 185 (302)
T 3s25_A 132 YRIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---C------------------ 185 (302)
T ss_dssp EEEETTSCCCE-EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---S------------------
T ss_pred EEEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---C------------------
Confidence 55556543333 2433332 456777777776554 5678888877654332222 1
Q ss_pred ceeEEEEecCCCEEEEEeCC--ceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc--CCCcEEEEEcCCC
Q psy8152 189 WVNGISFLPNSDKVAVCSKQ--GYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS--TTGDMMAVDLRGK 264 (444)
Q Consensus 189 ~i~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~ 264 (444)
... ..++|++.+|+-.... ..|..-++. +.....+. ...+ ..|+|.+.+|+-+. ..+.|..-++.
T Consensus 186 ~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ld----G~~~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D-- 254 (302)
T 3s25_A 186 NCY-KPVVLDDTNVYYMDVNRDNAIVHVNIN----NPNPVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKND-- 254 (302)
T ss_dssp CEE-EEEEEETTEEEEEEGGGTTEEEEECSS----SCCCEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETT--
T ss_pred Ccc-ceeeecCCEEEEEEcCCCcEEEEEECC----CCCeEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECC--
Confidence 121 2356888888766543 356555665 11222222 2223 34788888887653 23566666665
Q ss_pred CcceeEec
Q psy8152 265 GKPCYKYK 272 (444)
Q Consensus 265 ~~~~~~~~ 272 (444)
+...+++.
T Consensus 255 G~~r~~l~ 262 (302)
T 3s25_A 255 GTGFKELA 262 (302)
T ss_dssp SCCCEEEE
T ss_pred CCccEEee
Confidence 44344443
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.88 E-value=0.43 Score=47.75 Aligned_cols=257 Identities=9% Similarity=0.070 Sum_probs=138.4
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee--
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV-- 83 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~-- 83 (444)
+..|.+|+..| |..|+..+.+. ..... .....|.++... ...|..++.+ .|..|+..+++.......
T Consensus 73 ~g~lWigT~~G-l~~yd~~~~~f-----~~~~~-~~~~~i~~i~~~---~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~ 141 (758)
T 3ott_A 73 NTYLYMGTDNG-ILVYNYRADRY-----EQPET-DFPTDVRTMALQ---GDTLWLGALN-GLYTYQLQSRKLTSFDTRRN 141 (758)
T ss_dssp TTEEEEEETTE-EEEEETTTTEE-----CCCSC-CCCSCEEEEEEE---TTEEEEEETT-EEEEEETTTCCEEEECHHHH
T ss_pred CCcEEEEeCCC-eEEEeCCCCEE-----ECccc-CCCceEEEEEec---CCcEEEEcCC-cceeEeCCCCeEEEeccCCC
Confidence 45677887665 67888776552 11110 123457777543 3456667665 688888876554321000
Q ss_pred ccccccEEEEEeC-CCeEEEEecCCcEEEEEcCCCCccccccc-----cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcC
Q psy8152 84 SFGEGDIVGVSRY-DECILTAVKSGDVKLWRYKTEPDQWTNFN-----VGPQLECMKHNKHSNIIATGGKENDLKLWDLN 157 (444)
Q Consensus 84 ~~~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~ 157 (444)
......|.++..+ ...|..++.. -|..++..+++....... ....|.++...+++..|..|+. +-|..++..
T Consensus 142 ~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~ 219 (758)
T 3ott_A 142 GLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPS 219 (758)
T ss_dssp CCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETT
T ss_pred CcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCC
Confidence 0113457777554 3345556554 477788766543211111 1234788887776666666664 458888887
Q ss_pred CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe--------
Q psy8152 158 TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD-------- 229 (444)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------- 229 (444)
+++.......... .|.++...+++.+.+ |+.. -+.+++.. ... +..+.
T Consensus 220 ~~~~~~~~~l~~~------------------~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~---~~~-~~~~~~~~~~~~~ 275 (758)
T 3ott_A 220 TGQIKQTEAFHNN------------------SIKSLALDGNGDLLA-GTDN-GLYVYHND---TTP-LQHIIHDSRNIQS 275 (758)
T ss_dssp TTEEEEEEEEEEE------------------EEEEEEECTTCCEEE-EETT-EEEEECCT---TSC-CEEECCCTTCTTS
T ss_pred CCeEEeccCCCCC------------------eEEEEEEcCCCCEEE-EeCC-ceeEEecC---CCc-EEEEEcCCCCcCc
Confidence 6543221111111 488888877776554 4444 47788876 222 22221
Q ss_pred CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec-------cccCceeEEEecCCCCEEEEEECCCcEEEE
Q psy8152 230 IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK-------GFAGCVKDIACPLNENLILSVSLDRHFRVH 302 (444)
Q Consensus 230 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw 302 (444)
.....|.++...++|.+. .|+..| +.++.... ....+. .....|.++.-..+|.+.+. +..| +..+
T Consensus 276 l~~~~i~~i~~D~~g~lW-iGT~~G-l~~~~~~~---~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~ 348 (758)
T 3ott_A 276 LTNNIIWNIFADQEHNIW-LGTDYG-ISLSRYNS---ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG-LIRF 348 (758)
T ss_dssp CSCSCEEEEEECTTCCEE-EEESSS-EEEECCCC----CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE-EEEE
T ss_pred CCcCeEEEEEEcCCCCEE-EEeCCc-ccccccCC---ceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc-ceee
Confidence 123458888887777654 455556 55543221 111111 11246888877777765543 4444 5555
Q ss_pred EcCC
Q psy8152 303 DFHS 306 (444)
Q Consensus 303 ~~~~ 306 (444)
+..+
T Consensus 349 ~~~~ 352 (758)
T 3ott_A 349 TDPA 352 (758)
T ss_dssp SCTT
T ss_pred cccc
Confidence 5443
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.87 E-value=0.2 Score=43.72 Aligned_cols=207 Identities=9% Similarity=0.029 Sum_probs=113.0
Q ss_pred CCcEEEEEEc--CCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecC--------------CcEEEEEcCCC
Q psy8152 54 EESELLIAYS--GQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKS--------------GDVKLWRYKTE 117 (444)
Q Consensus 54 ~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~d--------------g~i~iw~~~~~ 117 (444)
++..|+.... ++.|+..+..... ...+. ...+.-|++++..|+-+... ..|+..++...
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~----~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSN-IHKLS----NDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCS-CEEEE----EEEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCC-CEEcc----CCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 4666666542 4666666665333 33332 23356678999988777553 35777777766
Q ss_pred CccccccccCCCeEEEEEeccCCEEEEee--C--CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEE
Q psy8152 118 PDQWTNFNVGPQLECMKHNKHSNIIATGG--K--ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGI 193 (444)
Q Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (444)
+... +.. .. +..|+++++.|+... . ...|...++.... ...+..+ . + .
T Consensus 99 ~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~-~-------------------~--~ 150 (302)
T 3s25_A 99 GSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNH-Y-------------------L--F 150 (302)
T ss_dssp CCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESS-C-------------------C--C
T ss_pred cceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCC-C-------------------c--e
Confidence 5432 222 11 236778888888765 2 3345555554322 2222211 1 2 3
Q ss_pred EEecCCCEEEEEeC-CceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCC--CcEEEEEcCCCCcceeE
Q psy8152 194 SFLPNSDKVAVCSK-QGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTT--GDMMAVDLRGKGKPCYK 270 (444)
Q Consensus 194 ~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~ 270 (444)
+++|+++.|+-.+. ...|...++. .......+. .... ..++|++.+|+-.... ..|..-++.. .....
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~---g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG--~~~~~ 221 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTA---SQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN--PNPVV 221 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETT---TTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS--CCCEE
T ss_pred EeeEECCEEEEEeCCCceEEEEECC---CCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC--CCeEE
Confidence 45677877775554 5678888877 222222122 1222 3466888888765433 3566666654 33444
Q ss_pred eccccCceeEEEecCCCCEEEEEEC--CCcEEEEEcCC
Q psy8152 271 YKGFAGCVKDIACPLNENLILSVSL--DRHFRVHDFHS 306 (444)
Q Consensus 271 ~~~h~~~i~~~~~s~~~~~l~s~~~--dg~i~vw~~~~ 306 (444)
+.. ..+ ..|+|++.+|+-+.. .+.|..-++..
T Consensus 222 Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 222 LTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp CSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred EeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 432 223 347788887776533 35566666654
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.77 E-value=0.27 Score=43.72 Aligned_cols=230 Identities=15% Similarity=0.094 Sum_probs=119.6
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee----ccccccEE--EEEeC---CCeEEEE-e--cCCcE
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV----SFGEGDIV--GVSRY---DECILTA-V--KSGDV 109 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~----~~~~~~v~--~~s~~---~~~l~~~-~--~dg~i 109 (444)
-...+.|+|. |++.++++-...|.|++++..+++....... ........ +++|+ +..|... + ..+.|
T Consensus 31 L~~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3566899999 7888666655489999998665543221111 11123334 44553 3444332 2 34456
Q ss_pred EEEEcCCCC-----c--ccc-c--c--ccCCCeEEEEEeccCCEEEEeeCC-------------CeEEEEEcCCc-----
Q psy8152 110 KLWRYKTEP-----D--QWT-N--F--NVGPQLECMKHNKHSNIIATGGKE-------------NDLKLWDLNTT----- 159 (444)
Q Consensus 110 ~iw~~~~~~-----~--~~~-~--~--~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~vwd~~~~----- 159 (444)
.-|.+..+. . ... + . ........|+|.|++.++++.+.. |.|.-.+....
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 556555421 1 000 1 1 112234579999999877775532 22322232211
Q ss_pred ----eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEe-CCceEEEEEcCCC---------------
Q psy8152 160 ----KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCS-KQGYVRVYDPKIT--------------- 219 (444)
Q Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~--------------- 219 (444)
..++. .++. ....++|+|++.++++-. .++.=.|.-+...
T Consensus 190 Pf~~~~i~a-~G~R-------------------Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~ 249 (347)
T 3das_A 190 PFPGSPVYS-YGHR-------------------NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGS 249 (347)
T ss_dssp SSTTCCEEE-BCCS-------------------BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCT
T ss_pred CCCCCeEEe-eCCC-------------------CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCc
Confidence 00000 1111 267899999877665432 2322222222200
Q ss_pred CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc----eeEeccccCceeEEEecCCCCEEEEEE
Q psy8152 220 TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP----CYKYKGFAGCVKDIACPLNENLILSVS 294 (444)
Q Consensus 220 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~h~~~i~~~~~s~~~~~l~s~~ 294 (444)
....++..+..+......|+|. .+.+++..-..+.|....+.. ... ...+.+....+..|+..|+|.++++..
T Consensus 250 ~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~-~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 250 GFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKG-TAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp TCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEET-TEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred cccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecC-CceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 1123344444333456677886 466666666667777777765 432 223334456789999999997665543
No 341
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.73 E-value=0.29 Score=43.50 Aligned_cols=227 Identities=9% Similarity=0.007 Sum_probs=112.8
Q ss_pred ccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEecc---CCEEEEe---eCCCeEEEEE
Q psy8152 88 GDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKH---SNIIATG---GKENDLKLWD 155 (444)
Q Consensus 88 ~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~vwd 155 (444)
..-+++.|+|.++++--..|.|++++...++... ...........|+|+|+ +..|+.. ..++.|.-|.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~ 113 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRML 113 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEE
Confidence 3445667888877765448999998866554321 11223556889999984 3444432 2345555565
Q ss_pred cCCceee-eeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeC-------------CceEEEEEcCCCCC
Q psy8152 156 LNTTKNI-FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSK-------------QGYVRVYDPKITTQ 221 (444)
Q Consensus 156 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~ 221 (444)
+..+... ..+. ....++.-.|.. ..| ....|+|.|+|.++++.+. .|.|.-++.. ..
T Consensus 114 ~~~~~~~~~~~~---~~~~i~~~~p~~--~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d--G~ 184 (347)
T 3das_A 114 YDEKKPSGEQLG---APDTVFRGIPKG--VIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD--GE 184 (347)
T ss_dssp BCTTSCTTCCBC---CCEEEEEEECCC--SSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT--SS
T ss_pred eCCCCcccccCC---CcEEEEEcCCCC--CCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC--CC
Confidence 5432100 0000 000001101110 011 3567999999987776542 3455555544 11
Q ss_pred --------ccceEEEeCCCCCeeEEEEccCCCEEEEE-cCCCcEEEEEcCCCC------------------cceeEeccc
Q psy8152 222 --------RRPVLKVDIPDVALSCITTTNQSHYVIVG-STTGDMMAVDLRGKG------------------KPCYKYKGF 274 (444)
Q Consensus 222 --------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~------------------~~~~~~~~h 274 (444)
...+.. .++. ....++|+|+|.+.++- +.++.=.|--+.. + .++..+..+
T Consensus 185 ip~~nPf~~~~i~a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~~~~~~~ 261 (347)
T 3das_A 185 PAPGNPFPGSPVYS-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKP-GDNYGWPEAEGKGGGSGFHDPVAQWSTD 261 (347)
T ss_dssp BCTTCSSTTCCEEE-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECT-TCBCCTTTCCSSCCCTTCCCCSEEECTT
T ss_pred ccCCCCCCCCeEEe-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcC-CCEecCCcccCCCCCccccCCcEecCCC
Confidence 112221 2443 35789999988766652 2333223322222 1 123333322
Q ss_pred cCceeEEEecCCCCEEEEEECCCcEEEEEcCCCceE---EEee--cCCceeEEEEcCC
Q psy8152 275 AGCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLL---RKDY--MQSRLTSILVRSD 327 (444)
Q Consensus 275 ~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~---~~~~--~~~~i~~~~~~~~ 327 (444)
......|+|. .+.+++..-..+.|....+.....+ ..+. ...++..++..++
T Consensus 262 ~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD 318 (347)
T 3das_A 262 EASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG 318 (347)
T ss_dssp TCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET
T ss_pred CCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC
Confidence 2355677775 4555555545556666666544321 1111 2356777776644
No 342
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.67 E-value=0.27 Score=42.41 Aligned_cols=223 Identities=10% Similarity=0.022 Sum_probs=118.7
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCcccc
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQWT 122 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 122 (444)
..|..|+.. . ...++. . +|.|+.|-....-.+.. .. .....|..++.-..+.+.-. +|.|+.|-....-.+..
T Consensus 24 ~~i~~ia~G-~-~h~~~l-~-~G~v~~wG~n~~Gqlg~-p~-~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 24 SGVDAIAGG-Y-FHGLAL-K-GGKVLGWGANLNGQLTM-PA-ATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SSCCEEEEC-S-SEEEEE-E-TTEEEEEECCSSSTTSC-CG-GGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCC
T ss_pred CCCcEEEeC-C-CeEEEE-E-CCEEEEEeCCCCCCCCC-Cc-cCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCC
Confidence 467777766 2 333444 4 89999997543222211 10 11335666765444433334 89999998654333322
Q ss_pred ccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCE
Q psy8152 123 NFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDK 201 (444)
Q Consensus 123 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 201 (444)
.......|..++.... ..+.-. +|.|..|-... ++.-..... ...|..++.... +
T Consensus 97 P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~-------------------~~~i~~i~~G~~--~ 152 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEA-------------------QSGVTALDGGVY--T 152 (282)
T ss_dssp CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGG-------------------GSSEEEEEECSS--E
T ss_pred CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccC-------------------CCCeEEEEcccC--E
Confidence 2222456888877643 333334 89999998765 222111011 114666666443 2
Q ss_pred EEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEE
Q psy8152 202 VAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDI 281 (444)
Q Consensus 202 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~ 281 (444)
.+.-. +|.|..|-... ..+. -........|..|+..... .++. .+|.|+.|-... ...+..-......|..+
T Consensus 153 ~~~l~-~G~v~~wG~n~--~gql-g~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~-~gqlg~p~~~~~~v~~i 224 (282)
T 3qhy_B 153 ALAVK-NGGVIAWGDNY--FGQT-TVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR-YKQTTVPTEALSGVSAI 224 (282)
T ss_dssp EEEEE-TTEEEEEECCT--TSTT-SCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCT-TSTTCCCGGGGSSCCEE
T ss_pred EEEEE-CCEEEEecCCC--CCCC-CCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCC-CCCCCCCcccCCCceEE
Confidence 33334 79999998761 1111 1000112456777665432 3333 599999998765 22222111123457777
Q ss_pred EecCCCCEEEEEECCCcEEEEEcCCC
Q psy8152 282 ACPLNENLILSVSLDRHFRVHDFHSK 307 (444)
Q Consensus 282 ~~s~~~~~l~s~~~dg~i~vw~~~~~ 307 (444)
+.... ..++. . +|.|+.|-....
T Consensus 225 ~~G~~-h~~al-~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 225 ASGEW-YSLAL-K-NGKVIAWGSSRT 247 (282)
T ss_dssp EECSS-CEEEE-E-TTEEEEESTTCC
T ss_pred EcCCC-EEEEE-E-CCEEEEecCCCC
Confidence 76443 33333 3 999999977653
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.51 E-value=0.48 Score=44.46 Aligned_cols=115 Identities=9% Similarity=0.069 Sum_probs=67.6
Q ss_pred CCeEEEEEeccCCEEEEeeC-CCeEEEEEcCCceeeee--eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE
Q psy8152 128 PQLECMKHNKHSNIIATGGK-ENDLKLWDLNTTKNIFS--AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV 204 (444)
Q Consensus 128 ~~v~~~~~~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 204 (444)
.....+.++|+|++++.++. +.++.++++......+. +..... ...... .........+|.++|....+
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~-~~~ae~-------e~GlGPlHt~Fd~~G~aYTt 394 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD-VIVGEP-------ELGLGPLHTTFDGRGNAYTT 394 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG-GEEECC-------BCCSCEEEEEECSSSEEEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc-ceEeec-------cCCCcccEEEECCCCceEee
Confidence 34456788999999887764 78899999985221100 000000 000000 01124778999999966667
Q ss_pred EeCCceEEEEEcCC------C-CCccceEEEeCCCCCeeEEEE------ccCCCEEEEEc
Q psy8152 205 CSKQGYVRVYDPKI------T-TQRRPVLKVDIPDVALSCITT------TNQSHYVIVGS 251 (444)
Q Consensus 205 ~~~d~~i~i~d~~~------~-~~~~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~ 251 (444)
..-|..|.-|++.. . .....+..+..|-.+ -.+.- .|+|++|++..
T Consensus 395 lfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 395 LFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp ETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred eeecceEEEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence 77899999999971 0 112344556555443 22322 56788888853
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.47 E-value=0.15 Score=50.47 Aligned_cols=197 Identities=10% Similarity=0.088 Sum_probs=102.9
Q ss_pred eCCCeEEEEecC----CcEEEEEcCCCCccccc-c------ccCCCeEEEEEec-cCCEEEEeeCC------CeEEEEEc
Q psy8152 95 RYDECILTAVKS----GDVKLWRYKTEPDQWTN-F------NVGPQLECMKHNK-HSNIIATGGKE------NDLKLWDL 156 (444)
Q Consensus 95 ~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~vwd~ 156 (444)
.++.+++.|+.+ ..+.+||..+++..... . .....-.+++..+ ++.+++.|+.+ +.+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 556677777653 46888888876544321 1 1111122334443 67778888754 34778888
Q ss_pred CCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCc--eEEEEEcCCCCCccceEE---EeCC
Q psy8152 157 NTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQG--YVRVYDPKITTQRRPVLK---VDIP 231 (444)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~---~~~~ 231 (444)
.+.+-...-.... +..-.+++...++++++.|+.++ .+.+||+. +.....+.. +...
T Consensus 476 ~t~~W~~~~~~p~-----------------~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~-t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 476 KTREWSMIKSLSH-----------------TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVT-EEIFKDVTPKDEFFQN 537 (695)
T ss_dssp TTTEEEECCCCSB-----------------CCBSCEEEECTTSCEEEECCBCSSCSEEEEETT-TTEEEECCCSSGGGGS
T ss_pred CCCcEEECCCCCC-----------------CcccceEEEEcCCEEEEECCCCCCCCEEEEECC-CCceEEccCCCCCCCc
Confidence 7754222110000 00122333334778888887655 68999988 222222221 1112
Q ss_pred CCCeeEEEEccC-CCEEEEEcCC-------CcEEEEEcCCCCcc-----eeEecc---ccCceeEEEecCCCCEEEEEEC
Q psy8152 232 DVALSCITTTNQ-SHYVIVGSTT-------GDMMAVDLRGKGKP-----CYKYKG---FAGCVKDIACPLNENLILSVSL 295 (444)
Q Consensus 232 ~~~i~~~~~~~~-~~~l~~~~~d-------g~i~iwd~~~~~~~-----~~~~~~---h~~~i~~~~~s~~~~~l~s~~~ 295 (444)
.....++.+... +++++.|+.. +.+.+||+.+ ... ...+.. ....-.+++...++++++.|+.
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~-~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA-ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT-TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC-CccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCc
Confidence 222234556655 6677777652 4588999987 551 112211 1111112222233677777764
Q ss_pred --------CCcEEEEEcCCCceE
Q psy8152 296 --------DRHFRVHDFHSKKLL 310 (444)
Q Consensus 296 --------dg~i~vw~~~~~~~~ 310 (444)
-..|.+||+.+.+-.
T Consensus 617 ~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 617 SPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CSSCCCCTTTSEEEEETTTTEEE
T ss_pred cCCCCCCCCCeEEEEECCCCeEE
Confidence 345889998876543
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.35 E-value=0.33 Score=51.04 Aligned_cols=235 Identities=12% Similarity=0.139 Sum_probs=128.2
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Cccccceeecc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSF 85 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~ 85 (444)
+.|+.- ...++.|+++.+... ++.+.....|.-=.|- +.+.|+..+. ..|+.|++.. ..+.+.|..+.
T Consensus 78 ~iiALr-ag~~lQiFnl~~k~k-------lks~~~~e~VvfWkWi--s~~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 78 KVIALK-AGKTLQIFNIEMKSK-------MKAHTMTDDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred ceEEEe-cCCeEEEeehHHhhh-------hcccccCCCceEEEec--CCCeeEEEcC-CeEEEeccCCCCccHHHHhcch
Confidence 344444 477899999877653 2222234566666676 3555555554 5899999964 34444443222
Q ss_pred c--cccEEEE--EeCCCeEEEEe-------cCCcEEEEEcCCCCccccccccCCCeEEEEEe--c-cCCEEEEeeC---C
Q psy8152 86 G--EGDIVGV--SRYDECILTAV-------KSGDVKLWRYKTEPDQWTNFNVGPQLECMKHN--K-HSNIIATGGK---E 148 (444)
Q Consensus 86 ~--~~~v~~~--s~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~~~~~---d 148 (444)
. ...|... +++.+.++..+ -.|.+.+|....+... .+.+|.+.-..+... + ..++++.+.. .
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 1 3344443 45666654332 3488999998876554 355565443333331 1 1223332222 2
Q ss_pred CeEEEEEcCCc-eeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEE
Q psy8152 149 NDLKLWDLNTT-KNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLK 227 (444)
Q Consensus 149 ~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 227 (444)
+.++|.++... ... .....+..-+-+.|+ .......++..++....+...+.-|.|++||+. ++.+++.
T Consensus 226 ~kLhi~Ei~~~~~~~---~~f~kk~~~~~~~~~----~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~---t~~~i~~ 295 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGN---QPFPKKAVDVFFPPE----AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE---TGTCIYM 295 (1630)
T ss_pred ceEEEEecCCCccCC---CCCccccccccCCcc----cccCcceEEEeccccCEEEEEecCceEEEEecc---cchhhhh
Confidence 68888888542 100 111111112222332 112245678888887888888999999999999 6777665
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 228 VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 228 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
-+....+|...+-++...=++.....|.|.-..+..
T Consensus 296 ~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 296 NRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred ccccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 554455555444443322344444666655555544
No 346
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.34 E-value=0.033 Score=45.45 Aligned_cols=109 Identities=10% Similarity=-0.032 Sum_probs=64.6
Q ss_pred ceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc----cceEEEeC-CCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR----RPVLKVDI-PDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
.+..++|+|++.+.++ .+|.++-.+.. +... ..-..+-. .-....++.|.|+|.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~-t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPP-THDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCC-CSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCC-CCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 3779999999887776 66766665554 1011 01111110 1112478999999987776 569888887643
Q ss_pred CCccee-----Ee-ccccCceeEEEecCCCCEEEEEECCCcEEEEEc
Q psy8152 264 KGKPCY-----KY-KGFAGCVKDIACPLNENLILSVSLDRHFRVHDF 304 (444)
Q Consensus 264 ~~~~~~-----~~-~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~ 304 (444)
.+..-. .+ ..--..+..|.|.|+|.+.+.. ++.++-+..
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~ 161 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALP 161 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCC
Confidence 111110 11 0111467899999999877666 777654433
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.29 E-value=0.42 Score=44.46 Aligned_cols=112 Identities=11% Similarity=0.096 Sum_probs=60.7
Q ss_pred CCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceee--eeeecccceeeEeeeCCCcccccCccceeEEEEecC---CCEE
Q psy8152 128 PQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNI--FSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPN---SDKV 202 (444)
Q Consensus 128 ~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l 202 (444)
...+.|+|.|+++++++-...+.|++++...++.. ..+.... ..+ .....+..|+|+|+ +..|
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~-------~~~-----~g~~Gllgia~~Pdf~~~g~l 94 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV-------NDA-----DGQNGLLGFAFHPDFKNNPYI 94 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC-------CCT-----TSSCSEEEEEECTTTTTSCEE
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccc-------ccc-----CCCCceeEEEECCCcCcCCEE
Confidence 35679999999987777554457888876544322 1111100 000 01124779999995 4444
Q ss_pred EEEeC-------------CceEEEEEcCCCC----CccceEE-EeC-CCCCeeEEEEccCCCEEEEEc
Q psy8152 203 AVCSK-------------QGYVRVYDPKITT----QRRPVLK-VDI-PDVALSCITTTNQSHYVIVGS 251 (444)
Q Consensus 203 ~~~~~-------------d~~i~i~d~~~~~----~~~~~~~-~~~-~~~~i~~~~~~~~~~~l~~~~ 251 (444)
.++.. ...|.-|++.... ..+.+.. +.. .......|+|.|+|.+.++.+
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 43332 2356666554100 1122222 221 123468999999998777644
No 348
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.02 E-value=0.79 Score=40.97 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=40.9
Q ss_pred ceeEEEEec-------CCCEEEEEeCCceEEEEEcCCCCCccceEE--Ee-CCCCCeeEEEEccCCCEEEEEc-CCCcE
Q psy8152 189 WVNGISFLP-------NSDKVAVCSKQGYVRVYDPKITTQRRPVLK--VD-IPDVALSCITTTNQSHYVIVGS-TTGDM 256 (444)
Q Consensus 189 ~i~~~~~~~-------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~-~~~~~i~~~~~~~~~~~l~~~~-~dg~i 256 (444)
.+..++|.+ ++.++++....+.|...++. ....+.. +. .....+..+++.|+|.++++.. .+|.|
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVN---GDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEE---TTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeC---CCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence 467788864 46677777777888888887 3322221 21 2234688999999998666533 34433
No 349
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.42 E-value=1.5 Score=39.79 Aligned_cols=305 Identities=8% Similarity=-0.046 Sum_probs=131.5
Q ss_pred cccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCC----eEEEEeCCCCccccce
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQ----KIKIYDTDFKNFNTNT 81 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~----~i~vw~~~~~~~~~~~ 81 (444)
...|++|+..| +.++....+.. .++.+........|.+|++.|.+...|+++...| .|...+ ..++.-..+
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~---~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~ 96 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARR---TWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEA 96 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSC---SEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEEC
T ss_pred CCEEEEEecCc-eEEEECCCCCC---CceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceEC
Confidence 45788888887 55555433111 1222211112457999999943455666666555 444332 222211111
Q ss_pred ee----cc--------ccccEEEEE--e-C-CCeEEEEecCCcEEEEEcCCCCcccccc-------------------cc
Q psy8152 82 DV----SF--------GEGDIVGVS--R-Y-DECILTAVKSGDVKLWRYKTEPDQWTNF-------------------NV 126 (444)
Q Consensus 82 ~~----~~--------~~~~v~~~s--~-~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------~~ 126 (444)
.. .. ....|.++. | + ...|.+++..+.|...+ ..++.-.... ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCC
Confidence 10 00 112455554 3 2 56666666666554432 1222111111 11
Q ss_pred CCCeEEEEEec-cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC-CEEEE
Q psy8152 127 GPQLECMKHNK-HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-DKVAV 204 (444)
Q Consensus 127 ~~~v~~~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~ 204 (444)
...+.+|.+.| +...|+.+...+.|...+ ..++.-..+..... ..+.|... ......+.+|++.|.. ..|.+
T Consensus 176 ~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~----~~~~p~~~-~~~g~~~~~i~~~~~~~~~l~v 249 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCA----ANFLPDPN-VEFGHDPHCVVQHPAAPDILYQ 249 (394)
T ss_dssp CCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCC----CTTSSSSS-SSSCBCEEEEEECSSSTTEEEE
T ss_pred CCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCcc----ccccCCCc-cccCcceeEEEECCCCCCEEEE
Confidence 23578999988 445555555444443322 12222111110000 00000000 0001248889998863 56666
Q ss_pred EeCCceEEEEEcCCCCCccceEE-EeCC-CCCeeEEEEccC-CCEEEEEcC-----------CCcEEEEEcCCCCcceeE
Q psy8152 205 CSKQGYVRVYDPKITTQRRPVLK-VDIP-DVALSCITTTNQ-SHYVIVGST-----------TGDMMAVDLRGKGKPCYK 270 (444)
Q Consensus 205 ~~~d~~i~i~d~~~~~~~~~~~~-~~~~-~~~i~~~~~~~~-~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~ 270 (444)
+...+ |...+-. ......+.. +... ...+.+++++|. ...|+++.. ++...||.....++....
T Consensus 250 g~~~g-l~~s~D~-G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~ 327 (394)
T 3b7f_A 250 QNHCG-IYRMDRR-EGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQR 327 (394)
T ss_dssp EETTE-EEEEETT-TTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEE
T ss_pred EcCCe-EEEeCCC-CCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceE
Confidence 66555 4443322 111111110 1110 023567888763 334444421 233455554441333333
Q ss_pred ec-ccc--C-----ceeEEEecCCC-CEEEEEECCCcEEEEEcCCCceEEEee-cCCceeEEEEc
Q psy8152 271 YK-GFA--G-----CVKDIACPLNE-NLILSVSLDRHFRVHDFHSKKLLRKDY-MQSRLTSILVR 325 (444)
Q Consensus 271 ~~-~h~--~-----~i~~~~~s~~~-~~l~s~~~dg~i~vw~~~~~~~~~~~~-~~~~i~~~~~~ 325 (444)
+. +.. . ....++++|.. ..|+.++..+.|..-. ..++.-..+. .-..+.+++|.
T Consensus 328 ~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 328 QDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp ECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred CCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 32 101 0 11357888753 4566666566554322 2233322222 23346666553
No 350
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=94.72 E-value=2 Score=37.70 Aligned_cols=245 Identities=11% Similarity=0.024 Sum_probs=130.9
Q ss_pred cccEEEecCCCcEEEEEcCCCccce---eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEe---CCC-----
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCII---KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYD---TDF----- 74 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~---~~~----- 74 (444)
...+++-+..|.|+--.+...+... +-...+.. .....+..+... .....|+.-+..|.++-.. +..
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~-ke~D~~~~~~~~-~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~ 80 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGL-KQDDIVAHFFVC-STHDLILFFTTQGRVYRAKAYDLPEASRTA 80 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCC-CGGGCEEEEEEE-ETTSEEEEEETTSEEEEEEGGGSCBCCSSS
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCcccccc-CCCCEEEEEEEe-CCCCEEEEEeCCCeEEEEEHHHCcCCCccC
Confidence 4578888999999987754322100 00111111 234455555555 4566677666678766544 332
Q ss_pred -Ccccc-ceeeccccccEEEEEe-----CCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEeccCCE
Q psy8152 75 -KNFNT-NTDVSFGEGDIVGVSR-----YDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKHSNI 141 (444)
Q Consensus 75 -~~~~~-~~~~~~~~~~v~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~ 141 (444)
|..+. .+.+ .....|.++.+ +..+++.++..|.|+...+....... ....-...+..+........
T Consensus 81 ~G~~i~~~l~l-~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ 159 (327)
T 3uc1_A 81 RGQHVANLLAF-QPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDD 159 (327)
T ss_dssp CCEEHHHHTTC-CTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCE
T ss_pred CCEEHHHccCC-CCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCE
Confidence 22211 1222 22445555421 46789999999999998865422111 11122455655555555567
Q ss_pred EEEeeCCCeEEEEEcC--CceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC-
Q psy8152 142 IATGGKENDLKLWDLN--TTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI- 218 (444)
Q Consensus 142 l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~- 218 (444)
|+..+..|.+..+... .-... ......+..+.+ .....|.++...+.+.+|+..+..|.++.-.+..
T Consensus 160 ill~T~~G~~~rf~~~~~eip~~---gr~a~Gv~~i~L-------~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~ 229 (327)
T 3uc1_A 160 LLLVSANGQSIRFSATDEALRPM---GRATSGVQGMRF-------NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEY 229 (327)
T ss_dssp EEEEETTSEEEEEECCTTTSCCC---CTTSBCEESSCC-------CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred EEEEECCCeEEEEECcccccCcC---CcCCCCeeeecC-------CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHc
Confidence 8888888988888776 31111 000011111111 1123577776666667899999999999887651
Q ss_pred ---CCCccceEE--EeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 219 ---TTQRRPVLK--VDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 219 ---~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
....+-+.. +......+..+........|+..+..|.+.-+....
T Consensus 230 ~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 230 PVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred cccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 011122222 222123344444444445666677778777776543
No 351
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=94.13 E-value=3.1 Score=37.28 Aligned_cols=151 Identities=12% Similarity=-0.004 Sum_probs=86.9
Q ss_pred CcccEEEecCCCcEEEEEcCCCccce---eeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC--------
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCII---KNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD-------- 73 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~-------- 73 (444)
+...+++.+.+|.|+--.+...+... +-+..+. +.....+..+... .....|+..+..|.++-+...
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~-lke~D~l~~~~~~-~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAS-TKEEDFIDQLWLV-NTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEE-CSCCCCEEEEEEE-CTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecc-cCCCCEEEEEEEe-cCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 45688999999999987764322100 0011111 1235566666666 456777777777887766532
Q ss_pred -CCcccc-ceeeccccccEEEEEe-----CCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEeccCC
Q psy8152 74 -FKNFNT-NTDVSFGEGDIVGVSR-----YDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKHSN 140 (444)
Q Consensus 74 -~~~~~~-~~~~~~~~~~v~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~~~ 140 (444)
.|..+. .+.+. ....|.++.+ .+.+|+.++..|.++...+....... ..+.-...+..+.......
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence 122211 12222 2445555532 35689999999999998865322110 1112245555555555556
Q ss_pred EEEEeeCCCeEEEEEcCC
Q psy8152 141 IIATGGKENDLKLWDLNT 158 (444)
Q Consensus 141 ~l~~~~~d~~i~vwd~~~ 158 (444)
.|+..+..|.+..+....
T Consensus 163 ~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGEST 180 (370)
T ss_dssp EEEEEETTSEEEEEEGGG
T ss_pred eEEEEeCCCeEEEEEccc
Confidence 777788888888887643
No 352
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.60 E-value=3.1 Score=35.62 Aligned_cols=221 Identities=12% Similarity=0.091 Sum_probs=117.6
Q ss_pred CCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-CccccceeeccccccEEEE
Q psy8152 15 TGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFNTNTDVSFGEGDIVGV 93 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~~~~v~~~ 93 (444)
+|.|+.|-........ +. . .....|..++.. ....++. . +|.|+.|-... +++-... .-...|..+
T Consensus 41 ~G~v~~wG~n~~Gqlg--~p-~---~~~~~i~~ia~G--~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~---~~~~~v~~i 107 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLT--MP-A---ATQSGVDAIAAG--NYHSLAL-K-DGEVIAWGGNEDGQTTVPA---EARSGVDAI 107 (282)
T ss_dssp TTEEEEEECCSSSTTS--CC-G---GGGSCCCEEEEC--SSEEEEE-E-TTEEEEEECCTTSTTCCCG---GGSSSEEEE
T ss_pred CCEEEEEeCCCCCCCC--CC-c---cCCCCEEEEEeC--CCEEEEE-E-CCEEEEeeCCCCCCCCCCc---ccCCCeEEE
Confidence 8999999865433210 11 0 123467777766 2344444 4 89999997543 2221111 113467777
Q ss_pred EeCCCeEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceee
Q psy8152 94 SRYDECILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVL 173 (444)
Q Consensus 94 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 173 (444)
+.-..+.+.-. +|.|+.|-....-.+.........|..++...... ++ -. +|.|..|-....-.+-. +.
T Consensus 108 a~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~-l~-~G~v~~wG~n~~gqlg~-p~------ 176 (282)
T 3qhy_B 108 AAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LA-VK-NGGVIAWGDNYFGQTTV-PA------ 176 (282)
T ss_dssp EEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EE-EE-TTEEEEEECCTTSTTSC-CG------
T ss_pred ECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EE-EE-CCEEEEecCCCCCCCCC-ce------
Confidence 76555555556 99999998665333322222345677776654322 22 23 69999997665221110 00
Q ss_pred EeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc-cceEEEeCCCCCeeEEEEccCCCEEEEEcC
Q psy8152 174 VYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR-RPVLKVDIPDVALSCITTTNQSHYVIVGST 252 (444)
Q Consensus 174 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 252 (444)
.....|..|+.... ..++. .+|.|+.|=.....+. .+. .....|..|+..... .++..
T Consensus 177 -----------~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~~G~~h-~~al~-- 235 (282)
T 3qhy_B 177 -----------EAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTTVPT----EALSGVSAIASGEWY-SLALK-- 235 (282)
T ss_dssp -----------GGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTCCCG----GGGSSCCEEEECSSC-EEEEE--
T ss_pred -----------ecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCCCCc----ccCCCceEEEcCCCE-EEEEE--
Confidence 00124777766443 22333 5999999976611111 111 112347777765443 33333
Q ss_pred CCcEEEEEcCCCCcceeEeccccCceeEEEecC
Q psy8152 253 TGDMMAVDLRGKGKPCYKYKGFAGCVKDIACPL 285 (444)
Q Consensus 253 dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s~ 285 (444)
+|.|+.|-... ..++.. ...|..++...
T Consensus 236 ~g~v~~wG~n~-~gq~~v----~~~v~~iaaG~ 263 (282)
T 3qhy_B 236 NGKVIAWGSSR-TAPSSV----QSGVSSIEAGP 263 (282)
T ss_dssp TTEEEEESTTC-CCCGGG----SSCEEEEEECS
T ss_pred CCEEEEecCCC-CccccC----CCCcEEEEECc
Confidence 99999997666 433322 23455555543
No 353
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.23 E-value=5.2 Score=37.04 Aligned_cols=104 Identities=16% Similarity=0.143 Sum_probs=55.2
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceeecc------ccccE--EEEEeC---CCeEEEEec------
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDVSF------GEGDI--VGVSRY---DECILTAVK------ 105 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~------~~~~v--~~~s~~---~~~l~~~~~------ 105 (444)
...+.|+|. |++.++++-...+.|++++..++.......+.. ..... ++++|+ +..|.++..
T Consensus 27 ~~P~~~a~~-pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWG-PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEc-CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 356799999 788766654443578888765554332221111 12333 455664 444444332
Q ss_pred -------CCcEEEEEcCCCC-------cccc-cc-ccCCCeEEEEEeccCCEEEEeeC
Q psy8152 106 -------SGDVKLWRYKTEP-------DQWT-NF-NVGPQLECMKHNKHSNIIATGGK 147 (444)
Q Consensus 106 -------dg~i~iw~~~~~~-------~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~ 147 (444)
...|.-|++.... .+.. +. ........|+|.|+|.++++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2345555543321 1111 11 11234789999999987776553
No 354
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=93.17 E-value=4 Score=35.51 Aligned_cols=245 Identities=10% Similarity=0.010 Sum_probs=125.8
Q ss_pred CcccEEEecCCCcEEEEEcCCCcccee---eeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC--------
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIK---NIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD-------- 73 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~-------- 73 (444)
+...+++.+.+|.|+--.+..-+.... ....+. +.-.+.+..+... .....|+..+..|.++-+...
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~-~ke~D~l~~~~~~-~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAAR-IKEEDFIDRLLVA-NTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEE-ETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeee-eCCCCEEEEEEEE-CCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 346788899999999887654332100 011111 1123444444444 356777777777887665542
Q ss_pred -CCcccc-ceeeccccccEEEEEe-----CCCeEEEEecCCcEEEEEcCCCCcc-------ccccccCCCeEEEEEeccC
Q psy8152 74 -FKNFNT-NTDVSFGEGDIVGVSR-----YDECILTAVKSGDVKLWRYKTEPDQ-------WTNFNVGPQLECMKHNKHS 139 (444)
Q Consensus 74 -~~~~~~-~~~~~~~~~~v~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~-------~~~~~~~~~v~~~~~~~~~ 139 (444)
.|..+. .+.+ .....|.++.+ ++.+++.++..|.++...+...... ..+..+ ..+..+......
T Consensus 80 a~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 80 ARGRPIVNLLPL-EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SCCEEGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCeEhhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 122211 2222 22345555532 4567899999999999876522111 112223 556555555555
Q ss_pred CEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC-
Q psy8152 140 NIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI- 218 (444)
Q Consensus 140 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~- 218 (444)
..++..+..|.+..+....-... ......+..+.+. ....|.++...+++..|++.+..|.++-..+..
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~---gr~a~Gv~~i~L~-------~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~ 227 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAM---GCNTTGVRGIRLG-------EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEY 227 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBC---CTTCCCEECCCCC-------TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGS
T ss_pred CEEEEECCCCcEEEEEHHHcCcc---CCCCCCeEeEEeC-------CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHh
Confidence 56777888888888876531111 1001111111221 122466665555556788889999999888741
Q ss_pred -----CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 219 -----TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 219 -----~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
...+.....+......+..+....+...|+..+.+|.+.-+.+..
T Consensus 228 ~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 228 PTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp CCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred ccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 011111222322234444444433344555666677766666544
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=90.12 E-value=10 Score=34.01 Aligned_cols=155 Identities=6% Similarity=-0.002 Sum_probs=83.9
Q ss_pred cEEEEEcCCC--Ccccccc------ccCCCeEEEEEe---cc----CCEEEEe-eCCCeEEEEEcCCceeeeeeecccce
Q psy8152 108 DVKLWRYKTE--PDQWTNF------NVGPQLECMKHN---KH----SNIIATG-GKENDLKLWDLNTTKNIFSAKNVSHR 171 (444)
Q Consensus 108 ~i~iw~~~~~--~~~~~~~------~~~~~v~~~~~~---~~----~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~ 171 (444)
+|.+||+.+. +.++.+. .....+..+++. |. ..+++.+ +..+-|.|+|+.+++.-+.+......
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5778888888 6664221 123457888887 22 2333333 34678999999998766544211110
Q ss_pred eeEeeeCCCcccccCccceeEEEEecC----CCEEEEEeCCceEEEEEcCC----CC-CccceEEEe--CCCCCeeEEEE
Q psy8152 172 VLVYSVKPDEFDLRRPVWVNGISFLPN----SDKVAVCSKQGYVRVYDPKI----TT-QRRPVLKVD--IPDVALSCITT 240 (444)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~d~~i~i~d~~~----~~-~~~~~~~~~--~~~~~i~~~~~ 240 (444)
-....+.-.+........|..|+++|+ ++.|.-....+ -++|.+.+ .. ....+..+- +....-..+++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 000011111222223346999999998 67776665543 23443321 11 112222221 11123345667
Q ss_pred c-cCCCEEEEEcCCCcEEEEEcCC
Q psy8152 241 T-NQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 241 ~-~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
. .+|.++++--..+.|..|+...
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTS
T ss_pred eCCCCeEEEEeccCCeEEEEeCCC
Confidence 5 6788888888888999999764
No 356
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=89.28 E-value=10 Score=32.93 Aligned_cols=200 Identities=9% Similarity=0.063 Sum_probs=112.1
Q ss_pred CcccEEEecCCCcEEEEEcCCCcccee---eeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-------
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIK---NIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF------- 74 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~------- 74 (444)
+...+++.+.+|.|+-..+..-+.... -...+. +.-...+..+... .....++..+..|.++-.....
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~-lke~D~l~~~~~~-~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFD-LNDGDEIVIALCV-NTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCC-CCTTCCEEEEEEE-ETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecc-cCCCCEEEEEEEE-CCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 456788999999999988754432100 111111 1123445555555 3567788888889877766431
Q ss_pred --Ccc-ccceeeccccccEEEEE-e----CCCeEEEEecCCcEEEEEcCCCCccc------cccccCCCeEEEEEeccCC
Q psy8152 75 --KNF-NTNTDVSFGEGDIVGVS-R----YDECILTAVKSGDVKLWRYKTEPDQW------TNFNVGPQLECMKHNKHSN 140 (444)
Q Consensus 75 --~~~-~~~~~~~~~~~~v~~~s-~----~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~~~v~~~~~~~~~~ 140 (444)
|.. ...+.+.. ...|.++. . ...+|+..+..|.++...+....... ........+..+.......
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 111 11222222 33444442 1 35678889999999998874321110 1122255666666655556
Q ss_pred EEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcC
Q psy8152 141 IIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPK 217 (444)
Q Consensus 141 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 217 (444)
.++..+..|.+..+....-... ......+..+.+.+ ...|.++...+.+..|++.+..|.++...+.
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~---gR~~~Gv~~i~L~~-------~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLT---NRGTQGVCGMKLKE-------GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBC---CTTBCCEECCCCCT-------TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHcccc---CCCCCCeEeEEeCC-------CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 7888888999988887541111 11111122222211 1245666555556778888999999999886
No 357
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=88.35 E-value=12 Score=32.51 Aligned_cols=198 Identities=12% Similarity=0.163 Sum_probs=109.3
Q ss_pred cCCcEEEEEEcCCeEEEEeCCCCccc-------cceeeccccccEEEE-EeCCCeEEEEecCCcEEEEEcCC--------
Q psy8152 53 VEESELLIAYSGQKIKIYDTDFKNFN-------TNTDVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYKT-------- 116 (444)
Q Consensus 53 ~~~~~l~~~~~d~~i~vw~~~~~~~~-------~~~~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~~-------- 116 (444)
++..++++.+.+|.|+--.+..-+.. ..+.+..+..-+..+ ......++..+..|.++-+....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45778889999999998765432211 111222222222222 34556777788889887776531
Q ss_pred -CCccccc--cccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152 117 -EPDQWTN--FNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV 190 (444)
Q Consensus 117 -~~~~~~~--~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (444)
|..+... +.....|.++...+ ...+|+..+..|.++...+..-.... ...+..+.+.. ...+
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r-----~~G~~~i~L~~-------~d~l 153 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK-----SRGVIVIKLND-------KDFV 153 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC---------CEECBCCCT-------TCCE
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC-----CCcEEEEecCC-------CCEE
Confidence 1211111 22344565554433 45678888999999988775421110 01111111111 1245
Q ss_pred eEEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 191 NGISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
..+........++..+..|.+..+.... ...+.....+.. ...|..+..-+++..|++.+..|..+...+..
T Consensus 154 v~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 154 TSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 5555555457788889999999998761 011222222332 33455555555566788888999998888754
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.34 E-value=16 Score=33.86 Aligned_cols=30 Identities=17% Similarity=0.137 Sum_probs=23.2
Q ss_pred cceEEEeeeccCCc-EEEEEEcCCeEEEEeCC
Q psy8152 43 ASVLALNWGNVEES-ELLIAYSGQKIKIYDTD 73 (444)
Q Consensus 43 ~~v~~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 73 (444)
...+.|+|. |++. .|+++...|.|++++..
T Consensus 14 ~~P~~~a~~-pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHS-GDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECC-SSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEEC-CCCCeEEEEEeCCceEEEEeCC
Confidence 345889999 6875 57777788999999754
No 359
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=88.05 E-value=12 Score=31.95 Aligned_cols=207 Identities=12% Similarity=0.068 Sum_probs=114.1
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEe---CCCCccccceeeccccccEEEEEe---CCCeEEEEecCCcEEEEEcC
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYD---TDFKNFNTNTDVSFGEGDIVGVSR---YDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~---~~~~~~~~~~~~~~~~~~v~~~s~---~~~~l~~~~~dg~i~iw~~~ 115 (444)
.+.+..+... ....+|+.-+..|.++--. +..+.... + + .....|.++-+ +..+++.++..|.++...+.
T Consensus 23 gD~~~~~~~~-~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l-~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~ 98 (276)
T 3no0_A 23 KAPVVNILRV-PFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-K-SREEKIVGAFIREKFGNRLLLATKKGYVKKIPLA 98 (276)
T ss_dssp CCCEEEEEEE-ETTSCEEEEETTSEEEEECSHHHHTSEECC-C-S-STTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGG
T ss_pred CCeEEEEEEE-CCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-C-CCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHH
Confidence 4556666555 4566777777778876543 32221111 2 2 22455555532 35689999999999999876
Q ss_pred CCC-----ccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccce
Q psy8152 116 TEP-----DQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWV 190 (444)
Q Consensus 116 ~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 190 (444)
.-. .......-...+..+........++..+..|.+..+....-... ......+..+.+. ....|
T Consensus 99 ~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~---gR~a~Gv~~i~L~-------~~d~v 168 (276)
T 3no0_A 99 EFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPS---TPGARGVQGIKLE-------KNDET 168 (276)
T ss_dssp GTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBC---CTTCCCEECCCCC-------TTCCE
T ss_pred HhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCc---CCCCCCEEEEccC-------CCCEE
Confidence 532 00011223455666655555567888888898888876431111 0000111111111 12346
Q ss_pred eEEEEecCCCEEEEEeCCceEEEEEcCC----CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEE--EEcCC
Q psy8152 191 NGISFLPNSDKVAVCSKQGYVRVYDPKI----TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMA--VDLRG 263 (444)
Q Consensus 191 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i--wd~~~ 263 (444)
.++...+++..++..+..|.++...+.. ....+-+..+ .....+..+........++..+..|.+.. ++...
T Consensus 169 v~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 169 SGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 6666666667888999999999988751 1112223333 22333444433333446666777787777 76554
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.24 E-value=16 Score=32.77 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=26.9
Q ss_pred eEEEEccC-CCEEEEEcCCCcEEEEEcCCCCcceeEeccccCceeEEEec
Q psy8152 236 SCITTTNQ-SHYVIVGSTTGDMMAVDLRGKGKPCYKYKGFAGCVKDIACP 284 (444)
Q Consensus 236 ~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~h~~~i~~~~~s 284 (444)
..++++|. ...|++++..+.|..-. .. ++.-..+..+-..+.+|+|.
T Consensus 344 ~~~~~~p~~~~~l~~g~~~g~l~~S~-D~-G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 344 QAMTADAHAPVGVYFGTTGGEIWASA-DE-GEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp BSEEECCSSSCCEEEECTTSCEEEES-ST-TSBCEEEECSCSCEEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEC-CC-CCCceEcccCCCCeeEEEEe
Confidence 46888874 34566776666554332 22 45455555444567777664
No 361
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=85.63 E-value=18 Score=31.64 Aligned_cols=244 Identities=13% Similarity=0.092 Sum_probs=126.5
Q ss_pred CcccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCC---------CC
Q psy8152 5 DDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTD---------FK 75 (444)
Q Consensus 5 ~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~---------~~ 75 (444)
+...+++.+.+|.|+--.+...+.. ....+. +.-.+.+..+... .....|+..+..|.++-+... .|
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~--~~~~~~-lke~D~l~~~~~~-~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAAS--NGQDFA-MKDTDRLLAMLEM-NTKDVLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHT--TTCCCC-CCTTCCEEEEEEE-ETTSEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhc--Cccccc-cCCCCEEEEEEEE-CCCCEEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 4567888999999998876432210 000111 1123445555554 456777777778887665542 12
Q ss_pred ccc-cceeeccccccEEEEE-e----CCCeEEEEecCCcEEEEEcCCCCcc-------ccccccCCCeEEEEEeccCCEE
Q psy8152 76 NFN-TNTDVSFGEGDIVGVS-R----YDECILTAVKSGDVKLWRYKTEPDQ-------WTNFNVGPQLECMKHNKHSNII 142 (444)
Q Consensus 76 ~~~-~~~~~~~~~~~v~~~s-~----~~~~l~~~~~dg~i~iw~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l 142 (444)
..+ ..+.+.. ...|.++. . .+.+++.++..|.++...+...... .....-...+..+........+
T Consensus 80 ~~i~~~i~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i 158 (323)
T 1wp5_A 80 QHIANIIPIDR-DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNEL 158 (323)
T ss_dssp EEGGGTSCCCT-TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEE
T ss_pred cChhhccCCCC-CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEE
Confidence 211 1122222 33455442 1 2567899999999999887522111 0111223556565555555677
Q ss_pred EEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-EEEEEeCCceEEEEEcCC---
Q psy8152 143 ATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-KVAVCSKQGYVRVYDPKI--- 218 (444)
Q Consensus 143 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~--- 218 (444)
+..+..|.+..+....-... ......+..+.+.+ ...|.++...+.+. .|++.+..|..+..++..
T Consensus 159 ~l~T~~G~~irf~~~ev~~~---gR~a~GV~~i~L~~-------~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~ 228 (323)
T 1wp5_A 159 FLVTHNGYALWFDESEVSIV---GVRAAGVKGMNLKE-------GDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEK 228 (323)
T ss_dssp EEEETTSEEEEEEGGGSCBC---CSSCCCEECCCCCT-------TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCC
T ss_pred EEEeCCCcEEEEEHHHCccc---CCCCcCEEEEEeCC-------CCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccc
Confidence 88888898888877541111 11111222222221 22466665544455 788889999988887761
Q ss_pred -CCCccceEEEe---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 219 -TTQRRPVLKVD---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 219 -~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
....+-+..+. .....+..+.....+..++..+..|.+..+.+..
T Consensus 229 ~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 229 ATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred cCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 00111122221 1122343332223334555666666665555543
No 362
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.47 E-value=35 Score=34.97 Aligned_cols=38 Identities=8% Similarity=0.056 Sum_probs=32.4
Q ss_pred CeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcceeEec
Q psy8152 234 ALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPCYKYK 272 (444)
Q Consensus 234 ~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 272 (444)
.+.+++..++..++++-+.|+++|+|++.+ ++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t-~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLST-NQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTT-TEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCC-CCeEeeec
Confidence 456777778888999999999999999999 88887654
No 363
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.68 E-value=25 Score=36.10 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=32.9
Q ss_pred ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45677777888899999999999999999999988754
No 364
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=84.26 E-value=20 Score=31.22 Aligned_cols=199 Identities=8% Similarity=0.019 Sum_probs=105.6
Q ss_pred cCCcEEEEEEcCCeEEEEeCCCCcc--ccceeeccccccEEEE-EeCCCeEEEEecCCcEEEEEcC---C------CCcc
Q psy8152 53 VEESELLIAYSGQKIKIYDTDFKNF--NTNTDVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYK---T------EPDQ 120 (444)
Q Consensus 53 ~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~---~------~~~~ 120 (444)
|+...+++.+.+|.|+--.+..-+. ...+....+..-+..+ ......|+..+..|.++-+... . |.++
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 4677888999999998775432111 1111222222222222 3455677777888887666542 1 2222
Q ss_pred ccc--cccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 121 WTN--FNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 121 ~~~--~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
... ......|.++...+ +..+++.++..|.++-..+..-..... ...+..+.+.. ...+..+..
T Consensus 83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r----~~G~~ai~l~e-------~d~lv~~~~ 151 (323)
T 1wp5_A 83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY----SKPLTGINLKN-------DDQVVDVHL 151 (323)
T ss_dssp GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC----SSCEECSCCCT-------TCCEEEEEE
T ss_pred hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc----cCceEEEEeCC-------CCEEEEEEE
Confidence 111 12334566554333 256789999999999887753111110 01111111111 113445555
Q ss_pred ecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCCC-EEEEEcCCCcEEEEEcCC
Q psy8152 196 LPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQSH-YVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 196 ~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~ 263 (444)
......|+..+..|.+..+.... ...+.....+.. ...|.++...+.+. .|++.+..|..+..++..
T Consensus 152 ~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 152 TDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp ECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred eCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 44556788888999998888751 011112222222 23455554444444 778888888888777653
No 365
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=82.30 E-value=24 Score=30.53 Aligned_cols=196 Identities=8% Similarity=0.013 Sum_probs=102.4
Q ss_pred CCcEEEEEEcCCeEEEEeCCCCcc-------ccceeeccccccEEEE-EeCCCeEEEEecCCcEEEEEcC---C------
Q psy8152 54 EESELLIAYSGQKIKIYDTDFKNF-------NTNTDVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYK---T------ 116 (444)
Q Consensus 54 ~~~~l~~~~~d~~i~vw~~~~~~~-------~~~~~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~---~------ 116 (444)
+...+++.+.+|.|+--.+..-+. ...+....+..-+..+ ......|+..+..|.++-+... .
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 567788899999998776543221 1111112222222222 3455667777888887666542 2
Q ss_pred CCccccc--cccCCCeEEEEEe---ccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152 117 EPDQWTN--FNVGPQLECMKHN---KHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN 191 (444)
Q Consensus 117 ~~~~~~~--~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (444)
|.++..+ ......|.++... .+..+++..+..|.++-..+..-..... ..+..+.+.. ...+.
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r-----~G~~~i~l~~-------~d~lv 149 (307)
T 1zi0_A 82 GRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT-----AGKVAIKLVD-------GDELI 149 (307)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT-----TCEESSCCCT-------TCCEE
T ss_pred CeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc-----CCeEEEEECC-------CCEEE
Confidence 2221111 2234456666443 2456788899999999887653111100 0011111110 11355
Q ss_pred EEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcC
Q psy8152 192 GISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLR 262 (444)
Q Consensus 192 ~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 262 (444)
.+........|+..+..|.+..+.... ...+.....+.. ...|.++...+++..|++.+..|.++-.++.
T Consensus 150 ~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 150 GVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred EEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 555544556788888899988887651 011111222322 3345555544455678888899998888764
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.48 E-value=37 Score=35.63 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=31.8
Q ss_pred ceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEee
Q psy8152 277 CVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDY 314 (444)
Q Consensus 277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 314 (444)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455666788899999999999999999999988765
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=74.91 E-value=38 Score=28.70 Aligned_cols=152 Identities=12% Similarity=0.084 Sum_probs=86.7
Q ss_pred CCCeEEEEecCCcEEEE---EcCCCCccccccccCCCeEEEEEec--cCCEEEEeeCCCeEEEEEcCCceeeeeeecccc
Q psy8152 96 YDECILTAVKSGDVKLW---RYKTEPDQWTNFNVGPQLECMKHNK--HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSH 170 (444)
Q Consensus 96 ~~~~l~~~~~dg~i~iw---~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 170 (444)
...+|+.-+..|.++-. ++........ ......|..+.. + +..+++..+..|.++-..+..-. .. ..
T Consensus 34 t~~~ll~fT~~G~v~~~~~~~lp~~~~~~l-l~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~-~~-----~~ 105 (276)
T 3no0_A 34 FTEGLFLVSNRGRVYWIAGSQALQGSKVSL-KSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE-YK-----AQ 105 (276)
T ss_dssp TTSCEEEEETTSEEEEECSHHHHTSEECCC-SSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-TC-----ST
T ss_pred CCCEEEEEcCCCeEEEEEhhhCccCccccc-CCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-hh-----cC
Confidence 44556666777776543 3322211112 334566776654 4 46789999999999988875422 00 00
Q ss_pred eeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEccCC
Q psy8152 171 RVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTNQS 244 (444)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~ 244 (444)
.+..+.+. ....+..+........|+..+..|.+..+.... ...+.....+... ..|..+...+++
T Consensus 106 G~~~i~lk-------egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~-d~vv~~~~~~~~ 177 (276)
T 3no0_A 106 GMPIIKLT-------EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKN-DETSGLRIWNGE 177 (276)
T ss_dssp TEECSCCC-------TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT-CCEEEEEEESSC
T ss_pred CeEEEecC-------CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCC-CEEEEEEEeCCC
Confidence 11111111 112355555555557888889999988887641 1122222233332 445555555556
Q ss_pred CEEEEEcCCCcEEEEEcCC
Q psy8152 245 HYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 245 ~~l~~~~~dg~i~iwd~~~ 263 (444)
.+|+..+..|.++...+..
T Consensus 178 ~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp SEEEEEETTSCEEEEEGGG
T ss_pred CEEEEEeCCCcEEEeEHHH
Confidence 7888889999999887654
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=71.91 E-value=50 Score=28.78 Aligned_cols=195 Identities=11% Similarity=0.100 Sum_probs=104.7
Q ss_pred CcEEEEEEcCCeEEEEeCCCCc-------cccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEE---cCC------
Q psy8152 55 ESELLIAYSGQKIKIYDTDFKN-------FNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWR---YKT------ 116 (444)
Q Consensus 55 ~~~l~~~~~d~~i~vw~~~~~~-------~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~---~~~------ 116 (444)
...+++.+..|.|+--.+.+-+ -...+.... ...+..+ ......|+.-+..|.++-.. +..
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke-~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQ-DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCG-GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 4577788888888866533211 111111112 2233322 34555666677777766554 322
Q ss_pred CCcccccc--ccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCcccee
Q psy8152 117 EPDQWTNF--NVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVN 191 (444)
Q Consensus 117 ~~~~~~~~--~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 191 (444)
|.++..+. .....|..+...+ +..++++.+..|.++-..+..-..... ..+..+.+. ....+.
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-----~G~~~i~lk-------e~D~lv 149 (327)
T 3uc1_A 82 GQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-----GGIVAVNLR-------DNDELV 149 (327)
T ss_dssp CEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-----SCEESCBCC-------TTCCEE
T ss_pred CEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-----CceEEEEEC-------CCCEEE
Confidence 22221111 2345566664443 477999999999999887754221110 001111110 011355
Q ss_pred EEEEecCCCEEEEEeCCceEEEEEcC--C--C----CCccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 192 GISFLPNSDKVAVCSKQGYVRVYDPK--I--T----TQRRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 192 ~~~~~~~~~~l~~~~~d~~i~i~d~~--~--~----~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
.+........|+..+..|.+..+... . . ..+.....+.. ...|.++...+.+.+|+..+..|.++.-.+..
T Consensus 150 ~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 150 GAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp EEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 55555555778888889988877655 1 0 11122222332 34466666656667888999999998887654
No 369
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=71.69 E-value=13 Score=36.35 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=30.5
Q ss_pred ceEEEeeeccCCcEEEEEEcCCeEEEEeCCCCccccceee
Q psy8152 44 SVLALNWGNVEESELLIAYSGQKIKIYDTDFKNFNTNTDV 83 (444)
Q Consensus 44 ~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 83 (444)
.|.++.+. ..+|++-+.|+++|+|++.+++++....+
T Consensus 223 ~Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 46665553 78999999999999999999998877665
No 370
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=70.43 E-value=59 Score=28.95 Aligned_cols=197 Identities=10% Similarity=0.077 Sum_probs=106.3
Q ss_pred cCCcEEEEEEcCCeEEEEeCCC-------CccccceeeccccccEEEE--EeCCCeEEEEecCCcEEEEEcC---C----
Q psy8152 53 VEESELLIAYSGQKIKIYDTDF-------KNFNTNTDVSFGEGDIVGV--SRYDECILTAVKSGDVKLWRYK---T---- 116 (444)
Q Consensus 53 ~~~~~l~~~~~d~~i~vw~~~~-------~~~~~~~~~~~~~~~v~~~--s~~~~~l~~~~~dg~i~iw~~~---~---- 116 (444)
++..++++.+.+|.|+--.+.. ++-...+.... ...+..+ ......|+..+..|.++-+... .
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 5778999999999999765432 11122222222 3333333 3345667777888887766532 1
Q ss_pred --CCccccc--cccCCCeEEEEEec---cCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccc
Q psy8152 117 --EPDQWTN--FNVGPQLECMKHNK---HSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVW 189 (444)
Q Consensus 117 --~~~~~~~--~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (444)
|..+..+ +.....|.++...+ ...+|+.++..|.++...+..-.... ...+..+.+.. ...
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~-----~~G~~ai~L~~-------~d~ 151 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRL-----ARGKIAINLDE-------GDA 151 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCC-----TTCEESSCCCT-------TCC
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhccc-----CCceEEEEeCC-------CCE
Confidence 2222111 12345566665432 45689999999999988865422110 01111111111 113
Q ss_pred eeEEEEecCCCEEEEEeCCceEEEEEcCC------CCCccceEEEeCCCCCeeEEEEcc---------------------
Q psy8152 190 VNGISFLPNSDKVAVCSKQGYVRVYDPKI------TTQRRPVLKVDIPDVALSCITTTN--------------------- 242 (444)
Q Consensus 190 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~i~~~~~~~--------------------- 242 (444)
+..+........|+..+..|.+..|.... ...+.....+.. ...|.++...+
T Consensus 152 lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~ 230 (370)
T 3l6v_A 152 LVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAK-GEEVVSLIVSERAGGVEDEVEDESAEEVVETT 230 (370)
T ss_dssp EEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEECCC-------------------
T ss_pred EEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCC-CCEEEEEEEecccccccccccccccccccccc
Confidence 44455544556788888899888887651 011111222222 23344444433
Q ss_pred --------------CCCEEEEEcCCCcEEEEEcCC
Q psy8152 243 --------------QSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 243 --------------~~~~l~~~~~dg~i~iwd~~~ 263 (444)
.+..|++.+..|..+...+..
T Consensus 231 ~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 231 DGAEPAVIDVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp ----------------CEEEEEETTSEEEEEEGGG
T ss_pred ccccccccccccccCCceEEEeeCCCCEEEEEHHH
Confidence 345788899999988887754
No 371
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=70.36 E-value=46 Score=27.77 Aligned_cols=155 Identities=11% Similarity=0.102 Sum_probs=81.6
Q ss_pred eEEEEecCCcEEEEEcCCCCccccccccCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeC
Q psy8152 99 CILTAVKSGDVKLWRYKTEPDQWTNFNVGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVK 178 (444)
Q Consensus 99 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (444)
.+++.+..|.|+--.............-...+..+........|+..+..|.++-+....-... +.....+ .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~---r~~G~~i---~-- 75 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSA---RGQGEPL---T-- 75 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCS---SSCCEEG---G--
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCc---CCCCeEe---e--
Confidence 4566778888876665432221112223344555544444556666677788766554321000 0000000 0
Q ss_pred CCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC----CCCccceEEEeCCCCCeeEEEEc-cCCCEEEEEcCC
Q psy8152 179 PDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI----TTQRRPVLKVDIPDVALSCITTT-NQSHYVIVGSTT 253 (444)
Q Consensus 179 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d 253 (444)
..+.+.....|.++.......+|+.++..|.++...+.. ...+.....+... ..+..+... .....|+..+..
T Consensus 76 -~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~ 153 (256)
T 1zvt_A 76 -GKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQA 153 (256)
T ss_dssp -GTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETT
T ss_pred -eeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEEEecCCCCEEEEEcCC
Confidence 011111223466664434557788899999999998751 1122333334333 344444444 345678888899
Q ss_pred CcEEEEEcCC
Q psy8152 254 GDMMAVDLRG 263 (444)
Q Consensus 254 g~i~iwd~~~ 263 (444)
|.+..+.+..
T Consensus 154 G~~lrf~~~e 163 (256)
T 1zvt_A 154 GRMLMFPVSD 163 (256)
T ss_dssp SEEEEEEGGG
T ss_pred CeEEEEEHHH
Confidence 9888888765
No 372
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=69.01 E-value=72 Score=29.43 Aligned_cols=97 Identities=8% Similarity=0.033 Sum_probs=50.5
Q ss_pred cEEEecCCCcEEEEEcCCCccceeeeeeecc-cC------cccceEEEeeeccC----CcEEEEEEcC------------
Q psy8152 8 NIYIGSSTGAFKGVNLSKDKCIIKNIQNVKY-IT------NKASVLALNWGNVE----ESELLIAYSG------------ 64 (444)
Q Consensus 8 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~-~~------h~~~v~~~~~~~~~----~~~l~~~~~d------------ 64 (444)
.|+++...|.|++++...... ...+..+.. +. .......|+|+ |+ +.+.++-+..
T Consensus 28 rl~V~er~G~i~~~~~~g~~~-~~~~~~~~~~~~~g~~~~~e~Gllgia~~-P~f~~n~~lYv~yt~~~~~~~~~~~~~~ 105 (463)
T 2wg3_C 28 RLFILEKEGYVKILTPEGEIF-KEPYLDIHKLVQSGIKGGDERGLLSLAFH-PNYKKNGKLYVSYTTNQERWAIGPHDHI 105 (463)
T ss_dssp CEEEEETTTEEEEECTTSCBC-SSCSEECTTTBCCCCSSSCCCSEEEEEEC-TTHHHHCEEEEEEEECCCSSCSSSSCEE
T ss_pred EEEEEeCCceEEEEeCCCCee-eeeecCCcceeccCccccCCCcceeeEeC-CCCcCCCEEEEEEeCCCCCcccCCcccc
Confidence 588888899999997533211 111111211 11 14567899999 44 3333332221
Q ss_pred CeEEEEeCCCC----------cccccee--eccccccEEEEEeCCCeEEEEecC
Q psy8152 65 QKIKIYDTDFK----------NFNTNTD--VSFGEGDIVGVSRYDECILTAVKS 106 (444)
Q Consensus 65 ~~i~vw~~~~~----------~~~~~~~--~~~~~~~v~~~s~~~~~l~~~~~d 106 (444)
..|.-|.+..+ +.+..+. ...|...-+.|.|+|.+.++.+..
T Consensus 106 ~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 106 LRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp EEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred eEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 13444555421 1111111 124666677888999887776543
No 373
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=68.29 E-value=95 Score=30.54 Aligned_cols=236 Identities=10% Similarity=0.033 Sum_probs=116.5
Q ss_pred eEEEe-eeccCCcEEEEEEc-----CCeEEEEeCCCCccccc-eeeccccc--------cEEEEEeCCCeEEEE------
Q psy8152 45 VLALN-WGNVEESELLIAYS-----GQKIKIYDTDFKNFNTN-TDVSFGEG--------DIVGVSRYDECILTA------ 103 (444)
Q Consensus 45 v~~~~-~~~~~~~~l~~~~~-----d~~i~vw~~~~~~~~~~-~~~~~~~~--------~v~~~s~~~~~l~~~------ 103 (444)
...+. ++ |++++++.+-. -..|+++|+.+++.+.- |. +.... .+.++..++.++++.
T Consensus 131 ~~g~~~~~-~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCF-QNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECS-SSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTC
T ss_pred EeceeecC-CCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCC
Confidence 34455 77 68887775322 25799999999987752 22 11111 333444333333321
Q ss_pred ----ecCCcEEEEEcCCCCccc--cccccCCCe-EEEEEeccCC-----EEEEeeC---CCeEEEEEcCC--ceeeeeee
Q psy8152 104 ----VKSGDVKLWRYKTEPDQW--TNFNVGPQL-ECMKHNKHSN-----IIATGGK---ENDLKLWDLNT--TKNIFSAK 166 (444)
Q Consensus 104 ----~~dg~i~iw~~~~~~~~~--~~~~~~~~v-~~~~~~~~~~-----~l~~~~~---d~~i~vwd~~~--~~~~~~~~ 166 (444)
+.-.+|+.|.+-+..... .+......+ .....++++. .+++.+. ...+.+.+... ++ +..+.
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 287 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKIN 287 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECC
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEee
Confidence 123568888776543221 122222222 2334445554 2443331 23455555543 22 12221
Q ss_pred cccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEE----------eCCceEEEEEcCCCCC----ccceEE-Ee-C
Q psy8152 167 NVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVC----------SKQGYVRVYDPKITTQ----RRPVLK-VD-I 230 (444)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----------~~d~~i~i~d~~~~~~----~~~~~~-~~-~ 230 (444)
.... ..+..++.+.+++.. ...+.|...++..... ...... +. .
T Consensus 288 ~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (711)
T 4hvt_A 288 MPSD--------------------ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT 347 (711)
T ss_dssp SCTT--------------------CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC
T ss_pred cCCc--------------------ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC
Confidence 1111 112334455544422 2467788999871100 122222 22 2
Q ss_pred CCCCeeEEEEccCCCEEEEEcCCCc--EEEEEcCCCCc-ceeE-eccc-cCceeEEEecCCCC-EEEEEEC---CCcEEE
Q psy8152 231 PDVALSCITTTNQSHYVIVGSTTGD--MMAVDLRGKGK-PCYK-YKGF-AGCVKDIACPLNEN-LILSVSL---DRHFRV 301 (444)
Q Consensus 231 ~~~~i~~~~~~~~~~~l~~~~~dg~--i~iwd~~~~~~-~~~~-~~~h-~~~i~~~~~s~~~~-~l~s~~~---dg~i~v 301 (444)
....+..+.|..+ .++++...++. |+++++.. +. .+.. +.-. .+.+..+.+++++. ++++.+. -+.++.
T Consensus 348 ~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~-g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~ 425 (711)
T 4hvt_A 348 ANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLEN-EQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYL 425 (711)
T ss_dssp TTEEEEEEEECSS-CEEEEEEETTEEEEEEECEET-TEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEE
T ss_pred CCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCC-CceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEE
Confidence 3445778888865 56666666664 67777766 54 2333 2211 24566666777664 4444443 356777
Q ss_pred EEcC
Q psy8152 302 HDFH 305 (444)
Q Consensus 302 w~~~ 305 (444)
+++.
T Consensus 426 ~d~~ 429 (711)
T 4hvt_A 426 WVKT 429 (711)
T ss_dssp ECTT
T ss_pred EeCC
Confidence 7765
No 374
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=67.80 E-value=71 Score=28.87 Aligned_cols=287 Identities=10% Similarity=0.009 Sum_probs=137.9
Q ss_pred EEEecCCCcEEEEEcCCCccc-----eeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Ccc-----
Q psy8152 9 IYIGSSTGAFKGVNLSKDKCI-----IKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNF----- 77 (444)
Q Consensus 9 l~~g~~dg~i~i~~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~----- 77 (444)
.+.-..+|.|+.|-....... ............-..|..|+.. ....+.-..+|.|+.|-... +++
T Consensus 36 ~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~v~~va~G---~~h~~~l~~~G~v~~wG~n~~GqLG~~~~ 112 (423)
T 3mvd_K 36 PKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAG---GMHNLVLTKSGDIYSFGCNDEGALGRDTS 112 (423)
T ss_dssp CCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECCSCSSEEEEEEC---SSEEEEEETTSCEEEEECCSSSTTCSCCC
T ss_pred ceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEccCCCCceEEeeC---CCeEEEEeCCCeEEEeECCCCcCCCCCCc
Confidence 344467888999965432110 0000011111222346666654 55666667789999996532 111
Q ss_pred -----ccceeeccccccEEEEEeCCCeEEEEecCCcEEEEEc--CC-CCc---------cccccccCCCeEEEEEeccCC
Q psy8152 78 -----NTNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRY--KT-EPD---------QWTNFNVGPQLECMKHNKHSN 140 (444)
Q Consensus 78 -----~~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~--~~-~~~---------~~~~~~~~~~v~~~~~~~~~~ 140 (444)
...... .....|..++.-..+.+.-..+|.|+.|-. .. +++ ..........|..++.. ..
T Consensus 113 ~~~~~~~P~~v-~~~~~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~ 189 (423)
T 3mvd_K 113 EDGSESKPDLI-DLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--AD 189 (423)
T ss_dssp STTSSSSCEEC-CCSSCEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SS
T ss_pred CCccccCCeEE-cCCCCEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CC
Confidence 000011 113457777776667677788999999985 22 221 00111123356666653 34
Q ss_pred EEEEeeCCCeEEEEEcCCceeeeeeeccc-----ceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEE
Q psy8152 141 IIATGGKENDLKLWDLNTTKNIFSAKNVS-----HRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYD 215 (444)
Q Consensus 141 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 215 (444)
..+.-..+|.|+.|-....-++-...... .........|..........|..++.... ..++.-..++.|+.|=
T Consensus 190 hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~v~~wG 268 (423)
T 3mvd_K 190 HLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNY-CTFMRESQTQVIWATG 268 (423)
T ss_dssp EEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETT-EEEEEETTTCCEEEEE
T ss_pred eEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCc-EEEEEECCCCeEEEEe
Confidence 45555678999999754411110000000 00000000111111111123556655432 2333336888999997
Q ss_pred cCCCCC--------ccceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc-----------ceeEeccccC
Q psy8152 216 PKITTQ--------RRPVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK-----------PCYKYKGFAG 276 (444)
Q Consensus 216 ~~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----------~~~~~~~h~~ 276 (444)
.....+ .............|..|+.. ..+.++-..+|.|+.|-....++ ....+.....
T Consensus 269 ~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~ 346 (423)
T 3mvd_K 269 LNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE 346 (423)
T ss_dssp ECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC--SSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS
T ss_pred CCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc--cCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC
Confidence 551110 00011111113356666553 34555667889999997543111 1112222223
Q ss_pred ceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 277 CVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 277 ~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
.|..|+... ...+....+|.|+.|-...
T Consensus 347 ~v~~ia~G~--~hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 347 KIVSVGCGE--VCSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp CEEEEEEET--TEEEEEETTSCEEEEECCT
T ss_pred CEEEEEcCC--CeEEEEcCCCCEEEECCCC
Confidence 577776643 3444457899999997655
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.02 E-value=19 Score=34.40 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=39.9
Q ss_pred eeEEEEccCCCEEEEEcCC------------CcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCEEEEE
Q psy8152 235 LSCITTTNQSHYVIVGSTT------------GDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENLILSV 293 (444)
Q Consensus 235 i~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~l~s~ 293 (444)
.-.|+|+|.|+++++-..+ +.+.+.+..+ ++...-+.++ ...++.++|+|+++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~-g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCC-CeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3568999999977764322 2355556666 6655555544 4589999999999877664
No 376
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=62.75 E-value=85 Score=28.00 Aligned_cols=244 Identities=9% Similarity=0.041 Sum_probs=119.3
Q ss_pred cEEEecCCCcEEEEEcCCCcc-------ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Ccc--
Q psy8152 8 NIYIGSSTGAFKGVNLSKDKC-------IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNF-- 77 (444)
Q Consensus 8 ~l~~g~~dg~i~i~~~~~~~~-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~-- 77 (444)
..++-..+|.|+.|-...... .......+..+ ....+..++.+ ......+.-..+|.|+.|-... +++
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~-~~~~~~~v~i~-~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVN-SGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGG-TTSCEEEEEEC-TTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred eEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccc-cCCceeEEEEC-cCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 445556789999997543211 00111112211 12344455555 4456666677889999996432 111
Q ss_pred ---c---cceeec-cccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc----------cc--cccCCCeEEEEEecc
Q psy8152 78 ---N---TNTDVS-FGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW----------TN--FNVGPQLECMKHNKH 138 (444)
Q Consensus 78 ---~---~~~~~~-~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~----------~~--~~~~~~v~~~~~~~~ 138 (444)
. ...... .....|..++.-..+.+.-..+|.|+.|-....-.+. .. ......|..++....
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g 221 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSG 221 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCS
T ss_pred CCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCC
Confidence 0 000000 1123677777767777777889999999754311110 00 112334666665432
Q ss_pred CCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCC
Q psy8152 139 SNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKI 218 (444)
Q Consensus 139 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 218 (444)
....+.-..+|.|..|-....-.+-.-.. ... ..|..........|..|+... .+.++-..+|.|+.|=...
T Consensus 222 ~~~t~~l~~~G~v~~wG~n~~GqLG~g~~-~~~-----~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 222 DAQTLCLTDDDTVWSWGDGDYGKLGRGGS-DGC-----KVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp SCEEEEEETTTEEEEEECCGGGTTSSSSC-CCE-----EEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEEECCG
T ss_pred CcEEEEEccCCEEEEEeCCCCCCCCCCCC-CCc-----cccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEEeCCC
Confidence 34555667789999997553111000000 000 000000000111355665543 4455557889999997641
Q ss_pred CC-----CccceE---EEe-CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 219 TT-----QRRPVL---KVD-IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 219 ~~-----~~~~~~---~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
.. ...... .+. .....|..|+.. ..+.++...+|.|+.|-...
T Consensus 294 ~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 294 YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp GGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCT
T ss_pred CCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCC
Confidence 00 000111 111 112345555553 34555567889999998765
No 377
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.31 E-value=31 Score=36.24 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=30.7
Q ss_pred ceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCccceEEEe
Q psy8152 189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQRRPVLKVD 229 (444)
Q Consensus 189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 229 (444)
.+.+++..++..++++-+.|+++|+|++. ++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~---t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS---TNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT---TTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC---CCCeEEeec
Confidence 45566777888999999999999999999 676766643
No 378
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=59.42 E-value=98 Score=27.64 Aligned_cols=166 Identities=7% Similarity=-0.040 Sum_probs=86.4
Q ss_pred ccceEEEeeeccCCcEEEE--EE-------------cCCeEEEEeCCCC--ccccceeeccc----cccEEEEEeC----
Q psy8152 42 KASVLALNWGNVEESELLI--AY-------------SGQKIKIYDTDFK--NFNTNTDVSFG----EGDIVGVSRY---- 96 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~--~~-------------~d~~i~vw~~~~~--~~~~~~~~~~~----~~~v~~~s~~---- 96 (444)
--.|..+... +.+.+-+. |. .-..|.+||+.+. +.++.+.++.. ......+..+
T Consensus 86 lvsV~~v~iD-~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 86 LTSIYQPVID-DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSCEEEEEEC-TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred eEEeeEEEEc-CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 4567777776 44444332 21 1236889999999 88888876432 2233333222
Q ss_pred -----CCeEEEEe-cCCcEEEEEcCCCCcccccc----cc--------------CCCeEEEEEecc----CCEEEEeeCC
Q psy8152 97 -----DECILTAV-KSGDVKLWRYKTEPDQWTNF----NV--------------GPQLECMKHNKH----SNIIATGGKE 148 (444)
Q Consensus 97 -----~~~l~~~~-~dg~i~iw~~~~~~~~~~~~----~~--------------~~~v~~~~~~~~----~~~l~~~~~d 148 (444)
+.++..+. ..+-|.|+|+.+++..+... .. ...|..|+++|+ ++.|+.....
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 23433333 46779999998876554221 00 235677777775 5566555443
Q ss_pred CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe-cCCCEEEEEeCCceEEEEEcC
Q psy8152 149 NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL-PNSDKVAVCSKQGYVRVYDPK 217 (444)
Q Consensus 149 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~i~d~~ 217 (444)
+ -++|.+.+.-... ......+..+.-.+ ....-..+++. .+|.++++--....|..|+..
T Consensus 245 s-~~ly~V~T~~L~~--~~~~~~v~~~G~kg------~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 245 A-IKVYSVNTKELKQ--KGGKLNPELLGNRG------KYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp C-SEEEEEEHHHHSS--TTCCCCCEEEEECC------TTCCEEEEEECTTTCEEEEEESSSSEEEEEETT
T ss_pred C-CcEEEEEHHHhhC--cchhhceEEeeecC------CCCCcceEEEeCCCCeEEEEeccCCeEEEEeCC
Confidence 3 2334333210000 00011111111100 00123345665 567777777888899999987
No 379
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.71 E-value=47 Score=31.56 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=39.9
Q ss_pred eeEEEEccCCCEEEEEcC------------CCcEEEEEcCCCCcceeEeccc-cCceeEEEecCCCCEEEEE
Q psy8152 235 LSCITTTNQSHYVIVGST------------TGDMMAVDLRGKGKPCYKYKGF-AGCVKDIACPLNENLILSV 293 (444)
Q Consensus 235 i~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~h-~~~i~~~~~s~~~~~l~s~ 293 (444)
...|.|.++|.+.++... .+.|..++..+ +++...+.+. ...++.++|+|++++|+++
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-Gel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCC-CeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 457899999988774321 12566677666 6655555433 3568999999999887765
No 380
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.24 E-value=17 Score=35.57 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=30.8
Q ss_pred CceeEEEecCCCCEEEEEECCCcEEEEEcCCCceEEEeec
Q psy8152 276 GCVKDIACPLNENLILSVSLDRHFRVHDFHSKKLLRKDYM 315 (444)
Q Consensus 276 ~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~ 315 (444)
..|.++.+ +..+|++-+.|+++|+|++.+++++.....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34555555 367999999999999999999999887654
No 381
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=54.95 E-value=1.2e+02 Score=27.09 Aligned_cols=284 Identities=12% Similarity=0.066 Sum_probs=130.1
Q ss_pred cccEEEecCCCcEEEEEcCCCccc-------eeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Ccc
Q psy8152 6 DYNIYIGSSTGAFKGVNLSKDKCI-------IKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNF 77 (444)
Q Consensus 6 ~~~l~~g~~dg~i~i~~~~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~ 77 (444)
...++.-..+|.|+.|-....... ......+..+ ....|..|+-. ....+.-..+|.|+.|-... +++
T Consensus 10 ~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~-~~~~i~~i~~G---~~~~~~l~~~G~v~~wG~n~~GqL 85 (389)
T 3kci_A 10 GRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEAL-ATLRPVQLIGG---EQTLFAVTADGKLYATGYGAGGRL 85 (389)
T ss_dssp -----------CEEEEEECTTSTTSSCSCSEEEEEEECHHH-HHTCEEEEEEE---TTEEEEEETTSCEEEEECCGGGTT
T ss_pred cccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccc-cCCceEEEEeC---CCeEEEEcCCCcEEEEECCCCCCC
Confidence 456677788999999976542210 0001111111 11234455443 45556667789999996432 111
Q ss_pred -------cc---cee-eccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc----------c-ccc-cCCCeEEEE
Q psy8152 78 -------NT---NTD-VSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW----------T-NFN-VGPQLECMK 134 (444)
Q Consensus 78 -------~~---~~~-~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~----------~-~~~-~~~~v~~~~ 134 (444)
.. .+. .......+.+++.-..+.+.-..+|.|+.|-....-.+. . +.. ....|..++
T Consensus 86 G~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va 165 (389)
T 3kci_A 86 GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 165 (389)
T ss_dssp SSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE
T ss_pred CCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEE
Confidence 00 000 001122335555556666667889999999653211110 0 111 122455555
Q ss_pred EeccCCEEEEeeCCCeEEEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEE
Q psy8152 135 HNKHSNIIATGGKENDLKLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRV 213 (444)
Q Consensus 135 ~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 213 (444)
.. ....+.-..+|.|+.|-... +++-.. .. .. ...|..........|..++......+.++-..+|.|+.
T Consensus 166 ~G--~~hs~alt~~G~v~~wG~n~~GqLG~~-~~-~~-----~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~ 236 (389)
T 3kci_A 166 AG--GAHSACVTAAGDLYTWGKGRYGRLGHS-DS-ED-----QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 236 (389)
T ss_dssp EC--SSEEEEEETTSCEEEEECCGGGTTCSS-SC-CC-----EEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEE
T ss_pred eC--cCeEEEEeCCCeEEEeCCCCCCCcCCC-CC-cc-----cccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEE
Confidence 53 34455556789999997654 111000 00 00 00000000011124666665443356666678999999
Q ss_pred EEcCCCCC-------ccce-EEEe-CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcc----------eeEecc-
Q psy8152 214 YDPKITTQ-------RRPV-LKVD-IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKP----------CYKYKG- 273 (444)
Q Consensus 214 ~d~~~~~~-------~~~~-~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----------~~~~~~- 273 (444)
|=.....+ .... ..+. .....|..|+.. ..+.++-..+|.|+.|-....+++ ...+..
T Consensus 237 wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l 314 (389)
T 3kci_A 237 WGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 314 (389)
T ss_dssp EECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG
T ss_pred EeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccC
Confidence 97541000 0001 1111 112235556554 334555578899999975431110 111111
Q ss_pred ccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 274 FAGCVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 274 h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
....|..|+.. ....+....+|.|+.|-...
T Consensus 315 ~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 315 QGKKVIAIATG--SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp TTCCEEEEEEC--SSEEEEEETTCCEEEEECCT
T ss_pred CCCCEEEEEec--cCeEEEECCCCCEEEeeCCC
Confidence 12346666653 33455567899999998764
No 382
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=52.79 E-value=1.9e+02 Score=28.86 Aligned_cols=139 Identities=9% Similarity=0.092 Sum_probs=65.6
Q ss_pred CCCcccEEEecCCCcEEEEEcCCCccceeeeeeeccc-C----cccceEEEeeeccCCcEEEEEEcCCe----EEEEeC-
Q psy8152 3 LADDYNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYI-T----NKASVLALNWGNVEESELLIAYSGQK----IKIYDT- 72 (444)
Q Consensus 3 ~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~----h~~~v~~~~~~~~~~~~l~~~~~d~~----i~vw~~- 72 (444)
+.+...++++...|.|.... ..++ .++.+... . ....|.+|++.|.+.+.++++..... -.||..
T Consensus 24 p~~~~~~~a~~~~ggv~rS~-DgG~----tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~ 98 (789)
T 1sqj_A 24 PKTKDLLYARTDIGGAYRWD-AGTS----KWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSE 98 (789)
T ss_dssp SSSTTCEEEEESSSCEEEEE-TTTT----EEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEES
T ss_pred CCCCCEEEEEecCCCEEEec-CCCC----CeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEEC
Confidence 45567788888777765443 2222 13333221 1 23479999999534556666543311 334433
Q ss_pred CCCccccceeec--------c-ccccEEEEEeC-CCeEEEEecCCcEEEEEcCC-CCcccccc------ccCCCeEEEEE
Q psy8152 73 DFKNFNTNTDVS--------F-GEGDIVGVSRY-DECILTAVKSGDVKLWRYKT-EPDQWTNF------NVGPQLECMKH 135 (444)
Q Consensus 73 ~~~~~~~~~~~~--------~-~~~~v~~~s~~-~~~l~~~~~dg~i~iw~~~~-~~~~~~~~------~~~~~v~~~~~ 135 (444)
..|+--..+... + +....+++.|. .+.++.+...+. ||.... ++.-.... .....+..+.+
T Consensus 99 DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~ 176 (789)
T 1sqj_A 99 DRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIF 176 (789)
T ss_dssp STTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTTCEEEEEE
T ss_pred CCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCCCeEEEEE
Confidence 223222111110 0 01123555653 345555553443 343332 22211111 11245788999
Q ss_pred ec-cCCEEEEeeCC
Q psy8152 136 NK-HSNIIATGGKE 148 (444)
Q Consensus 136 ~~-~~~~l~~~~~d 148 (444)
+| ++..++.+..+
T Consensus 177 ~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 177 DPERNGTIYASATA 190 (789)
T ss_dssp CTTSTTCEEEEESS
T ss_pred CCCCCCEEEEEEcC
Confidence 88 55566666554
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=52.14 E-value=37 Score=31.70 Aligned_cols=62 Identities=11% Similarity=0.207 Sum_probs=40.7
Q ss_pred ccEEEecCCCcEEEEEcCCCcc----ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEE
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKC----IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKI 69 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~v 69 (444)
..++.|+.+|.|+-.-+..... ....+..+..+....+|..|.++ +...+|++++..+.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~-~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELS-TKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEE-TTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEc-CCCCEEEEEECCeEEEE
Confidence 5688899999886665532211 11223344444456899999999 78899999998776655
No 384
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=50.66 E-value=55 Score=31.30 Aligned_cols=59 Identities=19% Similarity=0.117 Sum_probs=36.4
Q ss_pred eEEEEEeccCCEEEEeeCC------------CeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEec
Q psy8152 130 LECMKHNKHSNIIATGGKE------------NDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLP 197 (444)
Q Consensus 130 v~~~~~~~~~~~l~~~~~d------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 197 (444)
.-.|+|+|.|++++.-..+ +.+.+.+..+++...-+..+.. ..++.++|+|
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g-----------------aE~TG~~fsp 540 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-----------------CEVTGISFSP 540 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT-----------------CEEEEEEECT
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC-----------------ccCcCeeECC
Confidence 4568999998866653321 2344555555554433333222 3699999999
Q ss_pred CCCEEEEE
Q psy8152 198 NSDKVAVC 205 (444)
Q Consensus 198 ~~~~l~~~ 205 (444)
+++.|++.
T Consensus 541 Dg~tlfvn 548 (592)
T 3zwu_A 541 DQKTLFVG 548 (592)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 99877654
No 385
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=44.31 E-value=65 Score=31.36 Aligned_cols=60 Identities=8% Similarity=0.138 Sum_probs=40.6
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceEEEeeeccCC--cEEEEEEcCCeEEE
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVLALNWGNVEE--SELLIAYSGQKIKI 69 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~l~~~~~d~~i~v 69 (444)
..++.|+.+|.|.-.-..... ...+..+..+....+|..|.++ +.. .+|++++..+.++|
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~--~~~~ee~~~~~~~~pI~~l~l~-~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHA--VHIIEETQLFQDFEPVQTLLLS-SKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSS--EEEEEEEECCTTCCCCCEEEEC-CSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCC--ceEEEEecccCCCCcceeeEec-cCCCccEEEEEEcCeEEEE
Confidence 478899999988655333222 2234444445567889999999 666 88888888765555
No 386
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=44.31 E-value=33 Score=32.47 Aligned_cols=62 Identities=11% Similarity=0.245 Sum_probs=41.4
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccceE-EEeeeccCCcEEEEEEcCCeEEE
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASVL-ALNWGNVEESELLIAYSGQKIKI 69 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~~~~~d~~i~v 69 (444)
..++.|+.+|.|+-..+.........+..+..+....+|. .|.++ ++..+|++++..+.++|
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~-~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFS-INQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEEC-TTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEc-cCCCeEEEEecccccee
Confidence 5688999999988776654321112234444434467885 89999 68899999988655544
No 387
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=42.43 E-value=1.4e+02 Score=27.77 Aligned_cols=68 Identities=9% Similarity=0.057 Sum_probs=42.9
Q ss_pred CeeEEEEccC----CC--EEEEEcCCCcEEEEEcCCCC-------cceeEecc--ccCceeEEEecCCCCEEEEEECCCc
Q psy8152 234 ALSCITTTNQ----SH--YVIVGSTTGDMMAVDLRGKG-------KPCYKYKG--FAGCVKDIACPLNENLILSVSLDRH 298 (444)
Q Consensus 234 ~i~~~~~~~~----~~--~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~--h~~~i~~~~~s~~~~~l~s~~~dg~ 298 (444)
..++|+...- +. .++.|+.+|.|.-.-+.... ..+..+.. ...+|..|.++++..+|+.++..+.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4577766532 43 46669999987544332201 12333332 3578999999999999999988876
Q ss_pred EEE
Q psy8152 299 FRV 301 (444)
Q Consensus 299 i~v 301 (444)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 388
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=42.14 E-value=1.6e+02 Score=28.63 Aligned_cols=67 Identities=7% Similarity=0.124 Sum_probs=41.7
Q ss_pred CeeEEEEc----cCCC--EEEEEcCCCcEE-EEEcCCCCc-------ceeEec--cccCceeEEEecCCCCEEEEEECCC
Q psy8152 234 ALSCITTT----NQSH--YVIVGSTTGDMM-AVDLRGKGK-------PCYKYK--GFAGCVKDIACPLNENLILSVSLDR 297 (444)
Q Consensus 234 ~i~~~~~~----~~~~--~l~~~~~dg~i~-iwd~~~~~~-------~~~~~~--~h~~~i~~~~~s~~~~~l~s~~~dg 297 (444)
..+.|+.. ++++ .++.|+.+|.|. +.-... .. .+..+. ....+|..|.++++..+|++++..+
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~-~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~ 491 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPK-ETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAG 491 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC-------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCC-CCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCE
Confidence 34556553 2343 466799999874 333222 11 222222 3456899999999999999998887
Q ss_pred cEEE
Q psy8152 298 HFRV 301 (444)
Q Consensus 298 ~i~v 301 (444)
.++|
T Consensus 492 V~kV 495 (667)
T 4gz8_A 492 VAQL 495 (667)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6655
No 389
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=41.80 E-value=2.7e+02 Score=27.45 Aligned_cols=29 Identities=7% Similarity=0.033 Sum_probs=21.1
Q ss_pred cceEEEeeeccCCcEEEEEEcCCeEEEEe
Q psy8152 43 ASVLALNWGNVEESELLIAYSGQKIKIYD 71 (444)
Q Consensus 43 ~~v~~~~~~~~~~~~l~~~~~d~~i~vw~ 71 (444)
+.|..|+++|.+...|+++...+.|+.++
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~ 51 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWD 51 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEE
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeC
Confidence 38999999965556777777667666654
No 390
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=41.59 E-value=2.8e+02 Score=27.62 Aligned_cols=30 Identities=7% Similarity=-0.112 Sum_probs=22.6
Q ss_pred ccceEEEeeeccCCcEEEEEEcCCeEEEEe
Q psy8152 42 KASVLALNWGNVEESELLIAYSGQKIKIYD 71 (444)
Q Consensus 42 ~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~ 71 (444)
...|.+|+++|.+...++++...+.|...+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~ 43 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD 43 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec
Confidence 568999999965567778887777766554
No 391
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.58 E-value=1.3e+02 Score=28.62 Aligned_cols=61 Identities=18% Similarity=0.100 Sum_probs=36.9
Q ss_pred CCeEEEEEeccCCEEEEeeC------------CCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEE
Q psy8152 128 PQLECMKHNKHSNIIATGGK------------ENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISF 195 (444)
Q Consensus 128 ~~v~~~~~~~~~~~l~~~~~------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 195 (444)
.....|.|.++|.+.+.... .+.|..++..+++....+..... ..++.++|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~-----------------aEpnGiaf 538 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-----------------CEVTGISF 538 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT-----------------CEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC-----------------ccccCCEE
Confidence 34567899998877763221 12455555555554333322211 24899999
Q ss_pred ecCCCEEEEE
Q psy8152 196 LPNSDKVAVC 205 (444)
Q Consensus 196 ~~~~~~l~~~ 205 (444)
+|+++.|+++
T Consensus 539 SPD~ktLfV~ 548 (592)
T 4a9v_A 539 SPDQKTLFVG 548 (592)
T ss_dssp CTTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 9999887765
No 392
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=38.05 E-value=78 Score=30.79 Aligned_cols=62 Identities=13% Similarity=0.238 Sum_probs=40.7
Q ss_pred ccEEEecCCCcEEEEEc-CCCcc---ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEE
Q psy8152 7 YNIYIGSSTGAFKGVNL-SKDKC---IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKI 69 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~-~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~v 69 (444)
..++.|+.+|.|+-.-+ ..... ....+..++.+....+|..|.++ ++...|++++..+.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld-~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELS-TKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEE-TTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEc-CCCCEEEEEECCEEEEE
Confidence 46788899998864332 22111 11123445555677899999999 78999999998776655
No 393
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=36.40 E-value=3.2e+02 Score=26.82 Aligned_cols=193 Identities=8% Similarity=0.016 Sum_probs=97.6
Q ss_pred EEEeCCCeEEEE-ecC----CcEEEEEcCCCCccccccccCC--------CeEEEEEeccCCEEEEee-----------C
Q psy8152 92 GVSRYDECILTA-VKS----GDVKLWRYKTEPDQWTNFNVGP--------QLECMKHNKHSNIIATGG-----------K 147 (444)
Q Consensus 92 ~~s~~~~~l~~~-~~d----g~i~iw~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~~~~-----------~ 147 (444)
+++|++++++.+ +.. ..|+++|+.+++.+.--+.... ....++|..+ ..++.+. .
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~~~~~~ 214 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEITSSLY 214 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCBCTTSS
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCcCcCCC
Confidence 467888875554 332 3699999999987742222000 1134477643 3444432 1
Q ss_pred CCeEEEEEcCCce--eeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCC-----EEEEEe---CCceEEEEEcC
Q psy8152 148 ENDLKLWDLNTTK--NIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSD-----KVAVCS---KQGYVRVYDPK 217 (444)
Q Consensus 148 d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~l~~~~---~d~~i~i~d~~ 217 (444)
...|+.|.+-+.. -...+..... . .-.++..+++++ .+++.+ ....+.+.+..
T Consensus 215 ~~~v~~~~~Gt~~~~~~~v~~~~~~----------------~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 277 (711)
T 4hvt_A 215 PNSLYIWKRGESIEKAKKLFEVPKE----------------Y-IYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTK 277 (711)
T ss_dssp BCEEEEEETTSCGGGCEEEEECCTT----------------S-CEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECS
T ss_pred CCEEEEEECCCChHHCeEEeccCCC----------------c-eEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCC
Confidence 2467778776532 1112222111 0 122344455554 244333 22456666655
Q ss_pred CCCCccceEEEeCCCCCeeEEEEccCCCEEEEEc----------CCCcEEEEEcCCCCc-------ceeE-ec-cccCce
Q psy8152 218 ITTQRRPVLKVDIPDVALSCITTTNQSHYVIVGS----------TTGDMMAVDLRGKGK-------PCYK-YK-GFAGCV 278 (444)
Q Consensus 218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~-------~~~~-~~-~h~~~i 278 (444)
.... .+..+..... ..+..++.+.+++... ..+.|.+.++.. .. .... +. .....+
T Consensus 278 -~~~~-~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 352 (711)
T 4hvt_A 278 -YKNL-KLQKINMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTD-LLKTESDKTSLKILFTPTANEVF 352 (711)
T ss_dssp -SSSC-EEEECCSCTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGG-GGSCGGGCTTCEEEECCCTTEEE
T ss_pred -CCCC-cceEeecCCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCc-ccccccccccceEEECCCCCCeE
Confidence 1112 2222322222 1233455666655331 467788999876 31 2222 32 233467
Q ss_pred eEEEecCCCCEEEEEECCCc--EEEEEcCCCc
Q psy8152 279 KDIACPLNENLILSVSLDRH--FRVHDFHSKK 308 (444)
Q Consensus 279 ~~~~~s~~~~~l~s~~~dg~--i~vw~~~~~~ 308 (444)
..+.|..+ .++++...++. |+++++.+++
T Consensus 353 ~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 353 NFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred EEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 78888765 67777777765 6677766664
No 394
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=34.26 E-value=1.1e+02 Score=29.09 Aligned_cols=63 Identities=13% Similarity=0.209 Sum_probs=41.6
Q ss_pred ccEEEecCCCcEEEEEcCCCcc--ceeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEE
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKC--IIKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIY 70 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw 70 (444)
..++.|+.+|.|+-.-+..... ....+..+..+....+|..|.++ ++...|++++..+.++|-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls-~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLD-AERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEE-TTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEc-CCCCEEEEEecceEEEcc
Confidence 5678899999987555433221 01123334444456789999999 688899999887666653
No 395
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=32.71 E-value=2.9e+02 Score=25.27 Aligned_cols=204 Identities=13% Similarity=0.076 Sum_probs=101.4
Q ss_pred ccEEEEEeCCCeEEEEecCCcEEEEEcC---CCCc-----------cccccc--cCCCeEEEEEeccCCEEEEeeCCCeE
Q psy8152 88 GDIVGVSRYDECILTAVKSGDVKLWRYK---TEPD-----------QWTNFN--VGPQLECMKHNKHSNIIATGGKENDL 151 (444)
Q Consensus 88 ~~v~~~s~~~~~l~~~~~dg~i~iw~~~---~~~~-----------~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i 151 (444)
..|..++......+.-..+|.|+.|-.. .+++ ...... ....|..|+.. ....+.-..+|.|
T Consensus 148 ~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G--~~hs~alt~~G~v 225 (473)
T 3of7_A 148 HKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPG--KDHILFLDEEGMV 225 (473)
T ss_dssp CCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEEC--SSEEEEEETTSCE
T ss_pred CcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEec--CCeEEEEeCCCeE
Confidence 5677777766777777889999999751 1111 000111 12236666653 3455555678999
Q ss_pred EEEEcCC-ceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEEEeCCceEEEEEcCCCCCc--------
Q psy8152 152 KLWDLNT-TKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAVCSKQGYVRVYDPKITTQR-------- 222 (444)
Q Consensus 152 ~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-------- 222 (444)
..|-... ++.-...... . ....+.|....+ ..|..|+.- ..+.++-..+|.|+.|=....++.
T Consensus 226 ~~wG~n~~GqLG~~~~~~-~--~~~~~~p~~~~~---~~v~~Ia~G--~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~ 297 (473)
T 3of7_A 226 FAWGNGQQNQLGRKVMER-F--RLKTLDPRPFGL---RHVKYIASG--ENHCFALTKDNKLVSWGLNQFGQCGVSEDVED 297 (473)
T ss_dssp EEEECCTTSTTSSCCCGG-G--TTTTCSCEECSC---CSEEEEEEC--SSEEEEEETTSCEEEEEECTTSTTCCCSCCCT
T ss_pred EEEeCCCCCCCCCCcccc-c--cccccCceecCC---cceEEEecC--CCeEEEEecCCCEEEeCCCCCCCcCCCCcccC
Confidence 9997654 2211000000 0 000001100000 136666553 355555677899999975511100
Q ss_pred -cceE---EEe-CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCcce------------------------eEecc
Q psy8152 223 -RPVL---KVD-IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGKPC------------------------YKYKG 273 (444)
Q Consensus 223 -~~~~---~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~------------------------~~~~~ 273 (444)
..+. .+. .....|..|+.. ..+.++-..+|.|+.|-....+++= ..+.+
T Consensus 298 ~~~~~~P~~v~~~~~~~i~~ia~G--~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~ 375 (473)
T 3of7_A 298 GALVTKPKRLALPDNVVIRSIAAG--EHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNN 375 (473)
T ss_dssp TCEEEEEEECCCCTTCCEEEEEEC--SSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCS
T ss_pred CceeeccccccccCCccEEEEEeC--CCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCC
Confidence 0011 111 112346666653 3344555678999999764411110 00111
Q ss_pred ccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 274 FAGCVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 274 h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
...|..|+.- ....++...+|.|+.|-...
T Consensus 376 -~~~v~~Ia~G--~~hs~al~~~G~vy~wG~n~ 405 (473)
T 3of7_A 376 -VPKFKSVAAG--SHHSVAVAQNGIAYSWGFGE 405 (473)
T ss_dssp -SCCEEEEEEC--SSEEEEEETTSCEEEEECCT
T ss_pred -CCceEEEEeC--CCeEEEEeCCCcEEEeeCCC
Confidence 1145566553 23455557899999997654
No 396
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=30.85 E-value=87 Score=30.54 Aligned_cols=63 Identities=10% Similarity=0.192 Sum_probs=40.6
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccce-EEEeeeccCCcEEEEEEcCCeEEEE
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASV-LALNWGNVEESELLIAYSGQKIKIY 70 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw 70 (444)
..++.|+.+|.|+-.-+.........+..+..+....+| ..|.++ ++..+|++++..+.++|-
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~-~~~~~Lyv~s~~~V~qvP 476 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFS-INQLYLYVMSERQVTRVP 476 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEEC-TTSSEEEEECSSEEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEc-CCCCEEEEEecCEEEEEE
Confidence 568889999998866554322112223344333345677 689999 678889888887665553
No 397
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=28.69 E-value=3.2e+02 Score=24.43 Aligned_cols=239 Identities=8% Similarity=0.011 Sum_probs=116.4
Q ss_pred ccEEEecCCCcEEEEEcCCCcccee-------eeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeC--C-CCc
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIK-------NIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDT--D-FKN 76 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~--~-~~~ 76 (444)
.+.++-..+|.|+.|-.......-. ...+... .....|..|+.. ....+.-..+|.|+.|-. . .++
T Consensus 85 ~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~~~~~i~~va~G---~~hs~al~~~G~v~~wG~~~n~~Gq 160 (423)
T 3mvd_K 85 MHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLI-DLPGKALCISAG---DSHSACLLEDGRVFAWGSFRDSHGN 160 (423)
T ss_dssp SEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEEC-CCSSCEEEEEEC---SSEEEEEETTSCEEEEECEECSSSE
T ss_pred CeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEE-cCCCCEEEEEcC---cCeEEEEeCCCeEEEEeCCCCCCCC
Confidence 3445556789999997643221000 0001110 123456666655 445555577899999974 2 222
Q ss_pred cc--------cceeeccccccEEEEEeCCCeEEEEecCCcEEEEEcCCCCccc-----------------------cccc
Q psy8152 77 FN--------TNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRYKTEPDQW-----------------------TNFN 125 (444)
Q Consensus 77 ~~--------~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-----------------------~~~~ 125 (444)
+- ..... .....|..++.-..+.+.-..+|.|+.|-....-.+. ....
T Consensus 161 lG~~~~~~~~~p~~~-~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~ 239 (423)
T 3mvd_K 161 MGLTIDGNKRTPIDL-MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIIT 239 (423)
T ss_dssp EESBTTBCEEEEEES-STTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCT
T ss_pred cCcCCCCCCceeeEe-cCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeec
Confidence 11 00111 1234577777666677777889999999754321111 0011
Q ss_pred cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeee-eecccceeeEeeeCCCcccccCccceeEEEEecCCCEEEE
Q psy8152 126 VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFS-AKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNSDKVAV 204 (444)
Q Consensus 126 ~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 204 (444)
....|..++... ...++.-..++.|..|-....-.+-. -............. ...|..|+.-. .+.+.
T Consensus 240 ~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~--------~~~v~~ia~G~--~ht~a 308 (423)
T 3mvd_K 240 RAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTE--------LKDIRHIAGGQ--HHTVI 308 (423)
T ss_dssp TCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEEC--------CCSEEEEEECS--SEEEE
T ss_pred CCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcC--------CCCeEEEEccc--CeEEE
Confidence 123455555432 22333335788899997654111100 00000000000000 01366665532 45555
Q ss_pred EeCCceEEEEEcCCCC------Ccc---ceEEEeCCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCC
Q psy8152 205 CSKQGYVRVYDPKITT------QRR---PVLKVDIPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 205 ~~~d~~i~i~d~~~~~------~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
-..+|.|+.|=..... ... ....+......|..|+... .+.++-..+|.|+.|-...
T Consensus 309 lt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~--~hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 309 LTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE--VCSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp EETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEET--TEEEEEETTSCEEEEECCT
T ss_pred EeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCC--CeEEEEcCCCCEEEECCCC
Confidence 6778999999754100 000 1111222222566676653 3444457899999997655
No 398
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=28.38 E-value=3.5e+02 Score=24.77 Aligned_cols=99 Identities=6% Similarity=0.029 Sum_probs=48.0
Q ss_pred CCcEEEEEcCCCccceeee-eeec----ccCcccceEEEeeecc--------CCcEEEEEEcCCeEEEEeCCCC--cccc
Q psy8152 15 TGAFKGVNLSKDKCIIKNI-QNVK----YITNKASVLALNWGNV--------EESELLIAYSGQKIKIYDTDFK--NFNT 79 (444)
Q Consensus 15 dg~i~i~~~~~~~~~~~~~-~~~~----~~~h~~~v~~~~~~~~--------~~~~l~~~~~d~~i~vw~~~~~--~~~~ 79 (444)
...+.||............ ..+. .+.|.....++.+.+. ....|++.. .|.|+.|.--.. ..+.
T Consensus 56 ~~~l~VW~y~~~~~~~~~~c~~lpLp~sd~~~~~~lvsi~~~~~~~~~~s~~~pGlliVsp-tG~VryWesIs~~~~~~e 134 (450)
T 1xks_A 56 KEKLIIWKIALSPITKLSVCKELQLPPSDFHWSADLVALSYSSPSGEAHSTQAVAVMVATR-EGSIRYWPSLAGEDTYTE 134 (450)
T ss_dssp TTEEEEEECCSSCCGGGCCEEEEECCCCSSCCCGGGEEEEECC-------CTTEEEEEECT-TCEEEEESCTTCTTCCEE
T ss_pred CCeEEEEeecCCCCCCcccceeccCCccccccCCcEEEEEcCCCccccccCCCceEEEEcC-CccEEEccccCCCCceEE
Confidence 3478999987662111111 1111 1244444455544322 123444444 899999984322 2221
Q ss_pred ceeecccc-ccEEEE-EeCCCeEEEEecCCcEEEEEcC
Q psy8152 80 NTDVSFGE-GDIVGV-SRYDECILTAVKSGDVKLWRYK 115 (444)
Q Consensus 80 ~~~~~~~~-~~v~~~-s~~~~~l~~~~~dg~i~iw~~~ 115 (444)
+...-.. ..+..+ ...+.-++.+...|.+....++
T Consensus 135 -i~~~L~~~E~vt~l~n~epaGfIlaTStgrl~~lsir 171 (450)
T 1xks_A 135 -AFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIPE 171 (450)
T ss_dssp -EECC----CCEEEEEEETTTEEEEEETTCCEEEEEEC
T ss_pred -EEecCCCCceEEEEeecCCceEEEEeccceEEEEEec
Confidence 2211112 455554 3455556666677777777765
No 399
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.24 E-value=1.6e+02 Score=27.77 Aligned_cols=69 Identities=12% Similarity=0.025 Sum_probs=42.8
Q ss_pred eeEEEEecCC--CEEEEEeCCceEEEEEcCCCCCc-cceEEEe--CCCCCee-EEEEccCCCEEEEEcCCCcEEE
Q psy8152 190 VNGISFLPNS--DKVAVCSKQGYVRVYDPKITTQR-RPVLKVD--IPDVALS-CITTTNQSHYVIVGSTTGDMMA 258 (444)
Q Consensus 190 i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~--~~~~~i~-~~~~~~~~~~l~~~~~dg~i~i 258 (444)
+++|+....+ ..++.|+.+|.|.-.-+...... ..+..+. ....+|. .|.++++..+|++++..+.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 5566655433 56778899998876655411111 1223332 2246775 8999999999999987764443
No 400
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=28.08 E-value=1.4e+02 Score=28.30 Aligned_cols=63 Identities=13% Similarity=0.183 Sum_probs=39.8
Q ss_pred ccEEEecCCCcEEEEEcCCCc----cceeeeeeecccC---------cccceEEEeeeccCCcEEEEEEcCCeEEEE
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDK----CIIKNIQNVKYIT---------NKASVLALNWGNVEESELLIAYSGQKIKIY 70 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~----~~~~~~~~~~~~~---------h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw 70 (444)
..++.|+.+|.|+-.-+.... .....+..+..+. ...+|..|.++ +....|++++..+.++|-
T Consensus 421 tVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls-~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 421 TVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLD-RASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp EEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEE-GGGTEEEEECSSCEEEEE
T ss_pred EEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEc-CCCCEEEEEecCeEEEee
Confidence 568889999998544332211 1112233333332 24688999999 688899999988777764
No 401
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=25.93 E-value=4.3e+02 Score=25.06 Aligned_cols=202 Identities=11% Similarity=0.015 Sum_probs=102.9
Q ss_pred eEEEEeCCCCccccceeec-------------cccccEEEEEeCCCe-EEEEe----cCCcEEEEEcCCCCccccccccC
Q psy8152 66 KIKIYDTDFKNFNTNTDVS-------------FGEGDIVGVSRYDEC-ILTAV----KSGDVKLWRYKTEPDQWTNFNVG 127 (444)
Q Consensus 66 ~i~vw~~~~~~~~~~~~~~-------------~~~~~v~~~s~~~~~-l~~~~----~dg~i~iw~~~~~~~~~~~~~~~ 127 (444)
.|..|+...+++....... .|...|..+.-+|+- |+.|+ .+|++ +|.. -.+|.
T Consensus 293 ~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~~iD~dG~~-L~st--------~~gHG 363 (591)
T 2zux_A 293 MLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSMAVDHDGKG-MYST--------GLGHG 363 (591)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTEEECTTSCE-EEEC--------SCCCC
T ss_pred EEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeeeEECCCCCE-eeeC--------CCCCC
Confidence 4777777666553332211 245555556556643 44333 23333 4443 23788
Q ss_pred CCeEEEEEecc--CCEEEEeeCCC----eEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEecCC--
Q psy8152 128 PQLECMKHNKH--SNIIATGGKEN----DLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFLPNS-- 199 (444)
Q Consensus 128 ~~v~~~~~~~~--~~~l~~~~~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 199 (444)
..+....|.|+ |..++.+..++ -..+.|..+++.++....... .+......|.|+.
T Consensus 364 Da~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d----------------~Gr~~~~Didp~~pG 427 (591)
T 2zux_A 364 DALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKD----------------VGRGMAADIDPRYPG 427 (591)
T ss_dssp SCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSC----------------CCCEEEECCCTTSSS
T ss_pred CeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCC----------------CCceeEEecCCCCCc
Confidence 88888889884 45666665541 355689999999987764322 1123333344442
Q ss_pred CEEEEEeCCceEEEEEcCCCCCccceEEEeCCCCCeeEEEEccCC-CEEEEEcCCCcEEEEEcCCCCc--ceeEecc---
Q psy8152 200 DKVAVCSKQGYVRVYDPKITTQRRPVLKVDIPDVALSCITTTNQS-HYVIVGSTTGDMMAVDLRGKGK--PCYKYKG--- 273 (444)
Q Consensus 200 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~--- 273 (444)
-.+.+ ++ .+|+.. ++.+.... ....-..+-|.-+. +.|+-+ +.|.-|+... ++ .+.++.+
T Consensus 428 ~E~w~---~~--~l~~~~----G~~i~~~~-p~~~N~~i~WdGDl~relld~---~~i~k~~~~~-~~~~~l~~~~g~~s 493 (591)
T 2zux_A 428 QEVWA---NG--SLYSAK----GVKIGSGV-PSSTNFGIWWDGDLLREQLDS---NRIDKWDYQN-GVSKNMLTASGAAA 493 (591)
T ss_dssp CEEEE---TT--EEECTT----SCBCSSCC-CSCCSEEECCSSSSSCEEEET---TEEEEEETTT-TEEEEEEECTTEEC
T ss_pred eEEEe---cC--ceECCC----CCEecCCC-CCCcceeEEECCCCcHhhhCC---ceEEecccCC-CceeEEEeeccccc
Confidence 22222 22 367766 23332111 11112346676654 344443 2688888766 55 4444442
Q ss_pred ----ccCceeEEEecCCCC-EEEEEE-CCCcEEEEEcCC
Q psy8152 274 ----FAGCVKDIACPLNEN-LILSVS-LDRHFRVHDFHS 306 (444)
Q Consensus 274 ----h~~~i~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~ 306 (444)
...+..+..+--+.+ -|+..+ ....|+||....
T Consensus 494 nngtk~~P~l~aDi~GDwREEvI~~t~D~~~LrIYtt~~ 532 (591)
T 2zux_A 494 NNGTKATPTLQADLLGDWREEVVWRTEDSSALRIYTTTI 532 (591)
T ss_dssp BSGGGCBCSEEECCSSSSSCEEEEEETTSSEEEEECCCC
T ss_pred CCCCCCCEeeEEeccccCeeEEEEEeCCCCeEEEEeCCC
Confidence 111222333333332 344344 455699997643
No 402
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=25.85 E-value=4.8e+02 Score=25.53 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=53.8
Q ss_pred ceeEEEEecCCCEEEEEeCCceEEEEEcCC----CCCccceEEEeCCCCCeeEEEEc-cCCCEEEEEcCCCcEEEEEcCC
Q psy8152 189 WVNGISFLPNSDKVAVCSKQGYVRVYDPKI----TTQRRPVLKVDIPDVALSCITTT-NQSHYVIVGSTTGDMMAVDLRG 263 (444)
Q Consensus 189 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~iwd~~~ 263 (444)
.|.++...++..+++.++..|.++...+.. ...+.....+..... +..+... .....++..+..|.+..|....
T Consensus 555 ~i~~~~~~~~~~~l~~~T~~G~vk~~~l~~~~~~~~~g~~ai~L~~~d~-lv~~~~~~~~~~~v~l~t~~g~~lrf~~~~ 633 (716)
T 1zvu_A 555 TVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAH-VMPPVVIEDASDMLLAITQAGRMLMFPVSD 633 (716)
T ss_dssp CEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCC-BCCCEECCCTTCEEEEEETTSEEEEEESTT
T ss_pred eEEEEEEecCCceEEEEeCCceEEEecHHHhcccCccceEEEeeCCCCE-EEEEEEecCCCCEEEEEeCCCeEEEEEHHH
Confidence 466665555568888899999999988761 112223333443333 3334444 3455788888999999998765
Q ss_pred CCcceeEeccccCceeEEEec
Q psy8152 264 KGKPCYKYKGFAGCVKDIACP 284 (444)
Q Consensus 264 ~~~~~~~~~~h~~~i~~~~~s 284 (444)
-.+. .. ...|..+.+.
T Consensus 634 -v~~~---gr-~~GV~~i~l~ 649 (716)
T 1zvu_A 634 -LPQL---SK-GKGNKIINIP 649 (716)
T ss_dssp -SCBC---SS-BSCEESSCCC
T ss_pred -CCcc---Cc-ccCeEEEEec
Confidence 2222 12 3445555554
No 403
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=25.48 E-value=2.9e+02 Score=22.86 Aligned_cols=149 Identities=7% Similarity=0.002 Sum_probs=76.6
Q ss_pred cEEEEEEcCCeEEEEeCCCCccccceeeccccccEEEE-EeCCCeEEEEecCCcEEEEEcCC-------CCccccc--cc
Q psy8152 56 SELLIAYSGQKIKIYDTDFKNFNTNTDVSFGEGDIVGV-SRYDECILTAVKSGDVKLWRYKT-------EPDQWTN--FN 125 (444)
Q Consensus 56 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~v~~~-s~~~~~l~~~~~dg~i~iw~~~~-------~~~~~~~--~~ 125 (444)
..+++.+.+|.|+--....-. ...+....+..-+..+ ......|+..+..|.++-+.... |..+... ..
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~-~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDID-APGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCC-STTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCC-ceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 345667777777765543211 1122222322222222 33455666677888876655321 2211111 22
Q ss_pred cCCCeEEEEEeccCCEEEEeeCCCeEEEEEcCCceeeeeeecccceeeEeeeCCCcccccCccceeEEEEe-cCCCEEEE
Q psy8152 126 VGPQLECMKHNKHSNIIATGGKENDLKLWDLNTTKNIFSAKNVSHRVLVYSVKPDEFDLRRPVWVNGISFL-PNSDKVAV 204 (444)
Q Consensus 126 ~~~~v~~~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~ 204 (444)
....|.++....+..+|+.++..|.++...+..-.... ......+.+.. ...+..+... .....|+.
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~-----r~G~~~i~L~~-------~d~lv~~~~~~~~~~~i~l 149 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARN-----RAGKALITLPE-------NAHVMPPVVIEDASDMLLA 149 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCS-----TTCEECBCCCT-------TCCBCCCEECCCTTCEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccC-----cCceEEEEECC-------CCEEEEEEEecCCCCEEEE
Confidence 34567776443456678888999999988874311000 01111111110 0124344444 23467888
Q ss_pred EeCCceEEEEEcC
Q psy8152 205 CSKQGYVRVYDPK 217 (444)
Q Consensus 205 ~~~d~~i~i~d~~ 217 (444)
.+..|.+..+.+.
T Consensus 150 ~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 150 ITQAGRMLMFPVS 162 (256)
T ss_dssp EETTSEEEEEEGG
T ss_pred EcCCCeEEEEEHH
Confidence 8899998888876
No 404
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=24.44 E-value=1.3e+02 Score=28.19 Aligned_cols=61 Identities=15% Similarity=0.159 Sum_probs=40.0
Q ss_pred ccEEEecCCCcEEEEEcCCCccceeeeeeecccCcccce-EEEeeeccCCcEEEEEEcCCeEEEE
Q psy8152 7 YNIYIGSSTGAFKGVNLSKDKCIIKNIQNVKYITNKASV-LALNWGNVEESELLIAYSGQKIKIY 70 (444)
Q Consensus 7 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~~~~~d~~i~vw 70 (444)
..++.|+.+|.|+-.-+..... ...+..+.. ....+| ..|.++ +....|++++..+.++|-
T Consensus 401 tV~FlGT~~G~l~Kv~~~~~~~-~~~~ee~~v-~~~~pi~~~l~l~-~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 401 TIAFLGDSQGQLHRVYLGPGSD-GHPYSTQSI-QQGSAVSRDLTFD-GTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp EEEEEEETTSEEEEEECSSSCC-SCCSEEEES-STTSCCCSCCEEC-TTSSEEEEECSSCEEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCC-eeEEeeecc-CCCCcceeeEEEe-cCCCEEEEEeCCEEEEEE
Confidence 4678899999987666542211 112233332 445678 489999 688899999887776663
No 405
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=22.54 E-value=20 Score=30.10 Aligned_cols=36 Identities=22% Similarity=0.304 Sum_probs=0.0
Q ss_pred ccccCCccCccccccccccccccCCCCcchhccccc
Q psy8152 396 DKQDESEEDGEEEGEEEASENEYYTETDEDEKENEE 431 (444)
Q Consensus 396 ~~~~~~~ed~~ee~~e~~~~~~~~~~~d~~~~e~~~ 431 (444)
+.++++.+++++.+++++++.+..++.|.++++++.
T Consensus 222 d~~~~~~d~e~~~e~e~~d~~~~~~~~d~e~~~~~~ 257 (264)
T 2zd7_A 222 DLEDEEGESGLSADGDSEDDDGSLGEVDLPLSDEEP 257 (264)
T ss_dssp TTCC--------------------------------
T ss_pred ccccCcccccccccccccccccccccccccccccCc
No 406
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=21.84 E-value=4.2e+02 Score=23.52 Aligned_cols=283 Identities=11% Similarity=0.050 Sum_probs=136.8
Q ss_pred EEecCCCcEEEEEcCCCccc------eeeeeeecccCcccceEEEeeeccCCcEEEEEEcCCeEEEEeCCC-Cccc----
Q psy8152 10 YIGSSTGAFKGVNLSKDKCI------IKNIQNVKYITNKASVLALNWGNVEESELLIAYSGQKIKIYDTDF-KNFN---- 78 (444)
Q Consensus 10 ~~g~~dg~i~i~~~~~~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~---- 78 (444)
+.-..+|.|+.|-....... .....+.. ......|..|+.. ....+.-..+|.|+.|-... +++-
T Consensus 21 ~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~P~~-v~~~~~i~~va~G---~~hs~~l~~~G~v~~wG~n~~GqLG~~~~ 96 (413)
T 1a12_A 21 SHSTEPGLVLTLGQGDVGQLGLGENVMERKKPAL-VSIPEDVVQAEAG---GMHTVCLSKSGQVYSFGCNDEGALGRDTS 96 (413)
T ss_dssp TCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEE-ECCSSCEEEEEEC---SSEEEEEETTSCEEEEECCTTSTTCSCCC
T ss_pred eeecCCCcEEEEECCCCCcCCCCCCccccccceE-ccCCCCeEEEEeC---CCeEEEEcCCCCEEEEECCCCCCCCCCCC
Confidence 34467888999976432110 00001111 1123556666655 44555556789999996532 1110
Q ss_pred ------cceeeccccccEEEEEeCCCeEEEEecCCcEEEEEc--CC-CCcc----------ccccccCCCeEEEEEeccC
Q psy8152 79 ------TNTDVSFGEGDIVGVSRYDECILTAVKSGDVKLWRY--KT-EPDQ----------WTNFNVGPQLECMKHNKHS 139 (444)
Q Consensus 79 ------~~~~~~~~~~~v~~~s~~~~~l~~~~~dg~i~iw~~--~~-~~~~----------~~~~~~~~~v~~~~~~~~~ 139 (444)
..... .-...|..++.-..+.+.-..+|.|+.|-. .. +++- .........|..++.- .
T Consensus 97 ~~~~~~~P~~v-~l~~~i~~va~G~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v~~~~~i~~ia~G--~ 173 (413)
T 1a12_A 97 VEGSEMVPGKV-ELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG--N 173 (413)
T ss_dssp STTGGGSCEEC-CCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEECCSSCEEEEEEC--S
T ss_pred CCccccCCeEe-cCCCcEEEEecCCCeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEecCCCCEEEEEec--C
Confidence 00000 112367777776677777788999999975 21 1110 0011123356566553 3
Q ss_pred CEEEEeeCCCeEEEEEcCC-ceeeeeeecccce----eeEeeeCCCccccc-----CccceeEEEEecCCCEEEEEeCCc
Q psy8152 140 NIIATGGKENDLKLWDLNT-TKNIFSAKNVSHR----VLVYSVKPDEFDLR-----RPVWVNGISFLPNSDKVAVCSKQG 209 (444)
Q Consensus 140 ~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d~ 209 (444)
...+.-..+|.|..|-... +++-......... .......|...... ....|..|+... .+.++-..+|
T Consensus 174 ~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~--~hs~alt~~G 251 (413)
T 1a12_A 174 DHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA--YFTFAISHEG 251 (413)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEET--TEEEEEETTC
T ss_pred ceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccccCceEeeccccccCCccEEEEEeCC--CEEEEEeCCC
Confidence 3455556789999997654 2211000000000 00000111000000 122466676654 3444556889
Q ss_pred eEEEEEcCCCCC-----ccceE---EEe---CCCCCeeEEEEccCCCEEEEEcCCCcEEEEEcCCCCc-----------c
Q psy8152 210 YVRVYDPKITTQ-----RRPVL---KVD---IPDVALSCITTTNQSHYVIVGSTTGDMMAVDLRGKGK-----------P 267 (444)
Q Consensus 210 ~i~i~d~~~~~~-----~~~~~---~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----------~ 267 (444)
.|+.|=.....+ ..... .+. .....|..|+.. ..+.++-..+|.|+.|-....++ .
T Consensus 252 ~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G--~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~ 329 (413)
T 1a12_A 252 HVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGG--QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSI 329 (413)
T ss_dssp CEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEE
T ss_pred CEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecc--cceEEEEeCCCCEEEeeCCCCCccCCCCCCccccC
Confidence 999997651110 00001 111 111235556553 34555556789999997543111 0
Q ss_pred eeEeccccCceeEEEecCCCCEEEEEECCCcEEEEEcCC
Q psy8152 268 CYKYKGFAGCVKDIACPLNENLILSVSLDRHFRVHDFHS 306 (444)
Q Consensus 268 ~~~~~~h~~~i~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 306 (444)
...+.. ...|..|+.- ....+....+|.|+.|-...
T Consensus 330 P~~v~~-l~~v~~v~~G--~~hs~alt~~G~v~~wG~n~ 365 (413)
T 1a12_A 330 PTLISR-LPAVSSVACG--ASVGYAVTKDGRVFAWGMGT 365 (413)
T ss_dssp EEECCS-SSSEEEEEEC--SSEEEEEETTSCEEEEECCT
T ss_pred CEEecc-cCceeEEEEC--cceEEEEeCCCCEEEecCCC
Confidence 111111 2256666653 33555567899999997654
Done!