RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8153
         (193 letters)



>g1as4.1 e.1.1.1 (A:,B:) Antichymotrypsin, alpha-1 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 369

 Score = 26.0 bits (56), Expect = 3.6
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 76  FVIIPLSIYLILGLVFLFTGFISLLRIRTIMKHDGTKTDKLE 117
            +  PLSI   L  + L     +L  I   +K + T+T + E
Sbjct: 26  VIFSPLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAE 67


>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 156

 Score = 25.1 bits (54), Expect = 4.1
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 25 RHWLELLEDPSEQRSKLEELEELQHL 50
            +    E  +E+  KLE+   LQ  
Sbjct: 33 TRYQSFKERVAERGQKLEDSYHLQVF 58


>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206
          {Streptomyces coelicolor [TaxId: 1902]}
          Length = 200

 Score = 25.5 bits (55), Expect = 4.5
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 4/36 (11%)

Query: 8  FTGDSGRERLLR----TGVRSRHWLELLEDPSEQRS 39
           T        LR    TGVR+RH ++ +ED  E   
Sbjct: 28 HTDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPG 63


>d1tz0a_ d.58.4.5 (A:) Hypothetical protein BC2969 {Bacillus
          cereus [TaxId: 1396]}
          Length = 108

 Score = 24.5 bits (53), Expect = 4.8
 Identities = 9/46 (19%), Positives = 14/46 (30%), Gaps = 9/46 (19%)

Query: 1  MFVKLNAFT-----GDSGRERLLRTG----VRSRHWLELLEDPSEQ 37
          MF++   FT      +   ER    G          L +L     +
Sbjct: 3  MFIETKTFTVKEGTSNIVVERFTGEGIIEKFEGFIDLSVLVKKVRR 48


>d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 383

 Score = 25.6 bits (55), Expect = 4.9
 Identities = 7/45 (15%), Positives = 16/45 (35%)

Query: 76  FVIIPLSIYLILGLVFLFTGFISLLRIRTIMKHDGTKTDKLEKLM 120
            ++ PLS+   L  + L     +   I   + +D   +  +    
Sbjct: 43  VLLSPLSVATALSALSLGADERTESIIHRALYYDLISSPDIHGTY 87


>g1lq8.1 e.1.1.1 (A:,B:) Protein C inhibitor {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 358

 Score = 25.2 bits (54), Expect = 5.8
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 76  FVIIPLSIYLILGLVFLFTGFISLLRIRTIMKHDGTKTDKLE 117
               P+SI + L ++ L  G  + ++I   +  +  K+ + E
Sbjct: 21  IFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKE 62


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.142    0.448 

Gapped
Lambda     K      H
   0.267   0.0477    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 779,144
Number of extensions: 36543
Number of successful extensions: 137
Number of sequences better than 10.0: 1
Number of HSP's gapped: 136
Number of HSP's successfully gapped: 20
Length of query: 193
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 112
Effective length of database: 1,295,466
Effective search space: 145092192
Effective search space used: 145092192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 50 (23.6 bits)