Query psy8157
Match_columns 191
No_of_seqs 182 out of 1234
Neff 6.1
Searched_HMMs 13730
Date Fri Aug 16 20:04:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8157.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8157hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3cw9a1 e.23.1.1 (A:1-503) 4-c 99.8 1.5E-20 1.1E-24 161.5 5.9 133 8-152 355-501 (503)
2 d1ry2a_ e.23.1.1 (A:) Acetyl-C 99.8 1.2E-20 8.9E-25 171.9 3.3 134 10-155 455-614 (640)
3 d1amua_ e.23.1.1 (A:) Phenylal 99.8 5.9E-20 4.3E-24 160.8 4.6 133 8-154 360-512 (514)
4 d1pg4a_ e.23.1.1 (A:) Acetyl-C 99.8 1.5E-19 1.1E-23 166.5 5.0 133 11-155 466-617 (643)
5 d1lcia_ e.23.1.1 (A:) Lucifera 99.8 2E-19 1.4E-23 157.8 5.0 132 11-154 391-537 (541)
6 d1mdba_ e.23.1.1 (A:) Dihydrox 99.7 5.7E-19 4.1E-23 154.3 5.3 133 9-153 383-529 (536)
7 d1v25a_ e.23.1.1 (A:) Long cha 99.7 1.1E-19 7.7E-24 160.5 -1.1 137 7-155 379-529 (534)
8 d1rbli_ d.73.1.1 (I:) Ribulose 39.0 43 0.0031 22.6 6.3 39 60-106 70-109 (109)
9 d1bwvs_ d.73.1.1 (S:) Ribulose 30.9 79 0.0057 22.2 6.8 42 60-107 64-106 (138)
10 d1bxni_ d.73.1.1 (I:) Ribulose 29.8 24 0.0017 24.8 3.7 42 60-107 64-106 (129)
11 d1h8ba_ a.39.1.7 (A:) alpha-Ac 22.4 24 0.0018 22.3 2.3 21 107-128 32-52 (73)
No 1
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=99.80 E-value=1.5e-20 Score=161.53 Aligned_cols=133 Identities=11% Similarity=0.087 Sum_probs=109.8
Q ss_pred eeCcccccCccCCCCCCCCCCCcchh-------hhhhHhHhhhh-----eEEeceeeeeccCcchHHHHHHHHHhCCCcc
Q psy8157 8 ELGFPKVTKPKHDSSTLNDKPPKKAS-------INLLKALQRYL-----RFLWAARRVAQKDLTIADIFREHAVRSPNKV 75 (191)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~rdl~~l~~~l-----~i~~~g~nv~~~e~~Ve~~~e~~l~~hP~k~ 75 (191)
..+.+..+.+|+.+...+...+..+| .+|-.|...++ .++.+|++|++.+ || ++|.+||+
T Consensus 355 ~~~~~~~~~~~~~~~~~t~~~~~~g~~~TgD~g~~~~dG~l~~~GR~~d~ik~~G~~v~~~~--IE----~~l~~~p~-- 426 (503)
T d3cw9a1 355 VAASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSE--IE----RVLGTAPG-- 426 (503)
T ss_dssp EECCTTSCCCBTTCHHHHHHHEETTEEEEEEEEEECTTSCEEEEEESSCCEEETTEEECHHH--HH----HHHTTSTT--
T ss_pred ccccccccccccCChhhhHHHhcCCceecccccccccCCeEEeCCCcCCeEEECCEEECHHH--HH----HHHHhCCC--
Confidence 34567778888888777766666777 33333333333 4678999999999 85 56689999
Q ss_pred cceeeeEEEEEEecCCCCCceEEEEEE-cCCCCCCHHHHHHHHH-hcCCCCCcccEEEEeccCCCCCCCCcchHHHhhc
Q psy8157 76 IFMFENTEWTAQQVPGYEGRAGMAAIL-DINKSLDVTAVSEGIK-KALPSYARPLFIRCLREVEMTGTYKLKKLDLQKE 152 (191)
Q Consensus 76 ~~~V~eaaVvGVpd~~~~ge~~~A~Vv-~~g~~~~~e~l~~~l~-~~Lp~ykvP~~v~~v~eLP~T~tGKi~K~~Lr~~ 152 (191)
|.||+|+|++++ ..|+.++|+|+ .++...+.++|.++++ ++||.|++|+.|.++++||+|++|||+|++||++
T Consensus 427 ---V~~~~v~~~~~~-~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~~P~t~~GKi~R~~L~~~ 501 (503)
T d3cw9a1 427 ---VTEVVVIGLADQ-RWGQSVTACVVPRLGETLSADALDTFCRSSELADFKRPKRYFILDQLPKNALNKVLRRQLVQQ 501 (503)
T ss_dssp ---EEEEEEEEEEET-TTEEEEEEEEEECTTCCCCHHHHHHHHHHSSSCGGGSCSEEEECSCCCBCTTSCBCHHHHHHH
T ss_pred ---ccEEEEEEEECC-CCCeEEEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCCccEEEEECCCCcCCCcCccHHHHHHh
Confidence 999999999997 46788899988 8888899999999995 6899999999999999999999999999999986
No 2
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=1.2e-20 Score=171.91 Aligned_cols=134 Identities=13% Similarity=0.094 Sum_probs=101.1
Q ss_pred CcccccCccCCCCCCCCCCC---cchh-------hhhhHhHhhhh-----eEEeceeeeeccCcchHHHHHHHHHhCCCc
Q psy8157 10 GFPKVTKPKHDSSTLNDKPP---KKAS-------INLLKALQRYL-----RFLWAARRVAQKDLTIADIFREHAVRSPNK 74 (191)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~---~~~~-------~rdl~~l~~~l-----~i~~~g~nv~~~e~~Ve~~~e~~l~~hP~k 74 (191)
.+|.+|.||+.+.+.+...+ ..+| .+|-.|...++ +|+++|++|++.| || ++|.+||+
T Consensus 455 ~~p~~~~gy~~~~e~t~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~~I~p~e--IE----~~l~~~p~- 527 (640)
T d1ry2a_ 455 AWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAE--IE----AAIIEDPI- 527 (640)
T ss_dssp CCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHH--HH----HHHHSSTT-
T ss_pred cCCCcccccccCHHHHHhhhccCCCCeEEcCCceeECCCCCEEEEEcCCCEEEECCEEECHHH--HH----HHHHhCCC-
Confidence 35889999998765433322 2255 33433322222 6688899999999 86 56689999
Q ss_pred ccceeeeEEEEEEecCCCCCceEEEEEE-cCCCCCC----------HHHHHHHHHhcCCCCCcccEEEEeccCCCCCCCC
Q psy8157 75 VIFMFENTEWTAQQVPGYEGRAGMAAIL-DINKSLD----------VTAVSEGIKKALPSYARPLFIRCLREVEMTGTYK 143 (191)
Q Consensus 75 ~~~~V~eaaVvGVpd~~~~ge~~~A~Vv-~~g~~~~----------~e~l~~~l~~~Lp~ykvP~~v~~v~eLP~T~tGK 143 (191)
|.||+|+|++|+ ..|+.++|+|+ +++...+ .++|.++|+++||+|++|+.|.++++||+|+|||
T Consensus 528 ----V~~a~Vvg~~d~-~~ge~~~a~Vv~~~~~~~~~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGK 602 (640)
T d1ry2a_ 528 ----VAECAVVGFNDD-LTGQAVAAFVVLKNKSSWSTATDDELQDIKKHLVFTVRKDIGPFAAPKLIILVDDLPKTRSGK 602 (640)
T ss_dssp ----EEEEEEECCCCC-TTSCCCEEEEEEC------------CCSHHHHHHHHHHHHTCTTTSCSEEEECSCCCBCTTSC
T ss_pred ----ccEEEEEEEECC-CCCeEEEEEEEEcCCCCccccchHHHHHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCCCcC
Confidence 999999999987 46888899998 6654432 2568999999999999999999999999999999
Q ss_pred cchHHHhhccCC
Q psy8157 144 LKKLDLQKEGFD 155 (191)
Q Consensus 144 i~K~~Lr~~~~~ 155 (191)
|+|+.||+....
T Consensus 603 i~R~~Lr~~~~~ 614 (640)
T d1ry2a_ 603 IMRRILRKILAG 614 (640)
T ss_dssp BCHHHHHHSCC-
T ss_pred ccHHHHHHHHhC
Confidence 999999987544
No 3
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=99.77 E-value=5.9e-20 Score=160.80 Aligned_cols=133 Identities=14% Similarity=0.156 Sum_probs=103.3
Q ss_pred eeCcccccCccCCCCCCCCCCCc-------chh-------hhhhHhHhhhh-----eEEeceeeeeccCcchHHHHHHHH
Q psy8157 8 ELGFPKVTKPKHDSSTLNDKPPK-------KAS-------INLLKALQRYL-----RFLWAARRVAQKDLTIADIFREHA 68 (191)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~-------~rdl~~l~~~l-----~i~~~g~nv~~~e~~Ve~~~e~~l 68 (191)
.+.-|.+|.||+++...+...+. ++| ..|-.|...++ .|+.+|++|++.+ || ++|
T Consensus 360 ~v~~~~~~~gY~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~l~i~GR~~d~i~~~G~~i~p~~--IE----~~l 433 (514)
T d1amua_ 360 CIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEE--VE----SIL 433 (514)
T ss_dssp EEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHH--HH----HHH
T ss_pred EEccCcccccccccccccceeeEeccccCCCceEEECCEEEECCCCcEEEEecccCEEEECCEEECHHH--HH----HHH
Confidence 34468999999987643332222 344 22323322222 5678899999999 86 566
Q ss_pred HhCCCcccceeeeEEEEEEecCCCCCceEEEEEE-cCCCCCCHHHHHHHHHhcCCCCCcccEEEEeccCCCCCCCCcchH
Q psy8157 69 VRSPNKVIFMFENTEWTAQQVPGYEGRAGMAAIL-DINKSLDVTAVSEGIKKALPSYARPLFIRCLREVEMTGTYKLKKL 147 (191)
Q Consensus 69 ~~hP~k~~~~V~eaaVvGVpd~~~~ge~~~A~Vv-~~g~~~~~e~l~~~l~~~Lp~ykvP~~v~~v~eLP~T~tGKi~K~ 147 (191)
.+||+ |.||+|+|++++ ..|+.++|+|+ .++ .+.++|+++|+++|++|++|..|.++++||+|++|||+|+
T Consensus 434 ~~~~~-----V~~~~V~~~~~~-~~g~~~~a~v~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~lP~t~~GKi~R~ 505 (514)
T d1amua_ 434 LKHMY-----ISETAVSVHKDH-QEQPYLCAYFVSEKH--IPLEQLRQFSSEELPTYMIPSYFIQLDKMPLTSNGKIDRK 505 (514)
T ss_dssp TTSTT-----EEEEEEEEEECT-TSCEEEEEEEEESSC--CCHHHHHHHHHHHSCGGGSCSEEEECSSCCBCTTSSBCGG
T ss_pred HhCCC-----ccEEEEEEEECC-CCCEEEEEEEEcCCC--CCHHHHHHHHHhhCCcccCceEEEEeCCCCCCCCcChhHH
Confidence 89999 999999999987 57888888888 443 5789999999999999999999999999999999999999
Q ss_pred HHhhccC
Q psy8157 148 DLQKEGF 154 (191)
Q Consensus 148 ~Lr~~~~ 154 (191)
+||++.+
T Consensus 506 ~L~~~~~ 512 (514)
T d1amua_ 506 QLPEPDL 512 (514)
T ss_dssp GSCCCCC
T ss_pred hcCCCCC
Confidence 9998543
No 4
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=99.75 E-value=1.5e-19 Score=166.54 Aligned_cols=133 Identities=13% Similarity=0.098 Sum_probs=103.4
Q ss_pred cccccCccCCCCCCCCCC---Ccchh-------hhhhHhHhhhh-----eEEeceeeeeccCcchHHHHHHHHHhCCCcc
Q psy8157 11 FPKVTKPKHDSSTLNDKP---PKKAS-------INLLKALQRYL-----RFLWAARRVAQKDLTIADIFREHAVRSPNKV 75 (191)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~---~~~~~-------~rdl~~l~~~l-----~i~~~g~nv~~~e~~Ve~~~e~~l~~hP~k~ 75 (191)
+|.++.||+.+.+.+... ..++| .+|-.|...++ +|+.+|++|++.| || ++|.+||+
T Consensus 466 ~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~e--IE----~~l~~~p~-- 537 (643)
T d1pg4a_ 466 WPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAE--IE----SALVAHPK-- 537 (643)
T ss_dssp CTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHH--HH----HHHHHSTT--
T ss_pred CCcccccccCChhhchhhhcccCCCeEEcCCEEEECCCceEEEecccccEEEECCEEECHHH--HH----HHHHhCCC--
Confidence 578888887664322111 11233 22222222222 6789999999999 86 56689999
Q ss_pred cceeeeEEEEEEecCCCCCceEEEEEE-cCCCCCCHH---HHHHHHHhcCCCCCcccEEEEeccCCCCCCCCcchHHHhh
Q psy8157 76 IFMFENTEWTAQQVPGYEGRAGMAAIL-DINKSLDVT---AVSEGIKKALPSYARPLFIRCLREVEMTGTYKLKKLDLQK 151 (191)
Q Consensus 76 ~~~V~eaaVvGVpd~~~~ge~~~A~Vv-~~g~~~~~e---~l~~~l~~~Lp~ykvP~~v~~v~eLP~T~tGKi~K~~Lr~ 151 (191)
|.||+|+|++|+ ..|+.++|+|+ ++|...+.+ +|+++|+++||+|++|+.|.++++||+|++|||+|+.||+
T Consensus 538 ---V~eaaVvg~~d~-~~ge~~~a~Vv~~~~~~~~~~~~~~i~~~~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R~~Lr~ 613 (643)
T d1pg4a_ 538 ---IAEAAVVGIPHA-IKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRK 613 (643)
T ss_dssp ---EEEEEEEEEEET-TTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHH
T ss_pred ---cceEEEEEEECC-CCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCcccCccEEEEECCCCCCCCcCccHHHHHH
Confidence 999999999997 57889999999 888877754 7999999999999999999999999999999999999998
Q ss_pred ccCC
Q psy8157 152 EGFD 155 (191)
Q Consensus 152 ~~~~ 155 (191)
....
T Consensus 614 ~~~~ 617 (643)
T d1pg4a_ 614 IAAG 617 (643)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6543
No 5
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=99.75 E-value=2e-19 Score=157.76 Aligned_cols=132 Identities=10% Similarity=0.035 Sum_probs=98.8
Q ss_pred cccccCccCCCCCCCCCCCc-chh--hhhh-----HhHhhhh-----eEEeceeeeeccCcchHHHHHHHHHhCCCcccc
Q psy8157 11 FPKVTKPKHDSSTLNDKPPK-KAS--INLL-----KALQRYL-----RFLWAARRVAQKDLTIADIFREHAVRSPNKVIF 77 (191)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~-~~~--~rdl-----~~l~~~l-----~i~~~g~nv~~~e~~Ve~~~e~~l~~hP~k~~~ 77 (191)
=|.++.||+++...+...+. .+| -.|+ .|...++ .|+.+|++|++.+ || ++|.+||+
T Consensus 391 g~~~~~gY~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~~~~~GR~~d~i~~~G~~v~~~~--IE----~~l~~~p~---- 460 (541)
T d1lcia_ 391 GPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAE--LE----SILLQHPN---- 460 (541)
T ss_dssp STTSCSEETTBHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC-----CEEETTEEECHHH--HH----HHHHTSTT----
T ss_pred cCccCCeeCCChhhhhhcccCCccccCCCeeEEcCCeEEEEeeeecCEEEECCEEECHHH--HH----HHHHhCCC----
Confidence 47899999876544332222 334 1122 2222222 5688999999999 86 56689999
Q ss_pred eeeeEEEEEEecCCCCCceEEEEEE-cCCCCCCHHHHHHHHHhcCCCCC-cccEEEEeccCCCCCCCCcchHHHhhccC
Q psy8157 78 MFENTEWTAQQVPGYEGRAGMAAIL-DINKSLDVTAVSEGIKKALPSYA-RPLFIRCLREVEMTGTYKLKKLDLQKEGF 154 (191)
Q Consensus 78 ~V~eaaVvGVpd~~~~ge~~~A~Vv-~~g~~~~~e~l~~~l~~~Lp~yk-vP~~v~~v~eLP~T~tGKi~K~~Lr~~~~ 154 (191)
|.||+|+|++|+ ..|+.++|+|+ +++...+.++|.++|+++|++|+ +|.+|+++++||+|++|||+|++||+...
T Consensus 461 -V~~~~v~~~~~~-~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~~p~~i~~v~~lP~t~~GKi~r~~l~~~~~ 537 (541)
T d1lcia_ 461 -IFDAGVAGLPDD-DAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGVVFVDEVPKGLTGKLDARKIREILI 537 (541)
T ss_dssp -EEEEEEEEEEET-TTEEEEEEEEEECTTCCCCHHHHHHHHHHHSCGGGSCTTEEEEESSCCC-----CCHHHHHHHHH
T ss_pred -ccEEEEEEEECC-CCCEEEEEEEEECCCCCCCHHHHHHHHHHhCCccccCCcEEEEeCCCCcCCCcCccHHHHHHHHH
Confidence 999999999997 57888899988 88888999999999999998875 79999999999999999999999997643
No 6
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=99.73 E-value=5.7e-19 Score=154.29 Aligned_cols=133 Identities=12% Similarity=0.123 Sum_probs=103.3
Q ss_pred eCcccccCccCCCCCCCCCCCcc-hh-------hhhhHhHhhhh-----eEEeceeeeeccCcchHHHHHHHHHhCCCcc
Q psy8157 9 LGFPKVTKPKHDSSTLNDKPPKK-AS-------INLLKALQRYL-----RFLWAARRVAQKDLTIADIFREHAVRSPNKV 75 (191)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~-~~-------~rdl~~l~~~l-----~i~~~g~nv~~~e~~Ve~~~e~~l~~hP~k~ 75 (191)
+.-|.++.||+.+...+...+.+ +| .+|=.|...++ .++.+|++|++.+ || ++|.+||+
T Consensus 383 v~g~~~~~gY~~~~~~~~~~~~~~~~~~tGD~~~~~~dG~l~~~GR~~d~i~~~G~~i~p~~--IE----~~l~~~p~-- 454 (536)
T d1mdba_ 383 TRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEE--VE----NHLLAHPA-- 454 (536)
T ss_dssp EECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHH--HH----HHHTTSTT--
T ss_pred cCCCccccccccccccccccccccCccccCccccccCCCceecCCCcceEEEECCEEECHHH--HH----HHHHhCCC--
Confidence 34588999998876655554444 23 22222222222 5677899999999 85 56689999
Q ss_pred cceeeeEEEEEEecCCCCCceEEEEEEcCCCCCCHHHHHHHHHhc-CCCCCcccEEEEeccCCCCCCCCcchHHHhhcc
Q psy8157 76 IFMFENTEWTAQQVPGYEGRAGMAAILDINKSLDVTAVSEGIKKA-LPSYARPLFIRCLREVEMTGTYKLKKLDLQKEG 153 (191)
Q Consensus 76 ~~~V~eaaVvGVpd~~~~ge~~~A~Vv~~g~~~~~e~l~~~l~~~-Lp~ykvP~~v~~v~eLP~T~tGKi~K~~Lr~~~ 153 (191)
|.||+|+|++++ ..|+.++|+|+..+...+.++|+++|+++ ||+|++|+.|.++++||+|++|||+|++|++..
T Consensus 455 ---V~~a~vvg~~~~-~~g~~~~a~v~~~~~~~~~~~l~~~l~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~ 529 (536)
T d1mdba_ 455 ---VHDAAMVSMPDQ-FLGERSCVFIIPRDEAPKAAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAI 529 (536)
T ss_dssp ---EEEEEEEEEEET-TTEEEEEEEEEESSSCCCHHHHHHHHHHTTCCGGGSCSEEEECSSCCBCTTSCBCHHHHHHHH
T ss_pred ---ccEEEEEEEEcC-CCCeEEEEEEEECCCCCCHHHHHHHHHhcCCCcCcCccEEEEECCCCcCCCcCccHHHHHHHH
Confidence 999999999987 46788888888333456789999999876 999999999999999999999999999998753
No 7
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=99.72 E-value=1.1e-19 Score=160.46 Aligned_cols=137 Identities=12% Similarity=0.062 Sum_probs=70.7
Q ss_pred eeeCcccccCccCCCCCCCCCCC-cchh-------hhhhHhHhhhh-----eEEeceeeeeccCcchHHHHHHHHHhCCC
Q psy8157 7 VELGFPKVTKPKHDSSTLNDKPP-KKAS-------INLLKALQRYL-----RFLWAARRVAQKDLTIADIFREHAVRSPN 73 (191)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~rdl~~l~~~l-----~i~~~g~nv~~~e~~Ve~~~e~~l~~hP~ 73 (191)
+.+.=|.||.||+++...+...+ .++| ++|-.|..-++ .++++|++|++.+ || ++|.+||+
T Consensus 379 l~v~g~~v~~gY~~~~~~t~~~~~~dg~~~TGDlg~~~~~G~l~~~GR~~~~i~~~G~~v~~~e--IE----~~l~~~~~ 452 (534)
T d1v25a_ 379 VQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVD--LE----NALMGHPK 452 (534)
T ss_dssp EEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEEHHH--HH----CC------
T ss_pred EEEcCCcccceecCChhhhhhhcccCCCCccCceeEECCCccEEEecccccEEEECCEEECHHH--HH----HHHHhCCC
Confidence 44556899999998755544443 3445 33333333333 6688899999999 86 45679999
Q ss_pred cccceeeeEEEEEEecCCCCCceEEEEEEcCCCCCCHHHHHH-HHHhcCCCCCcccEEEEeccCCCCCCCCcchHHHhhc
Q psy8157 74 KVIFMFENTEWTAQQVPGYEGRAGMAAILDINKSLDVTAVSE-GIKKALPSYARPLFIRCLREVEMTGTYKLKKLDLQKE 152 (191)
Q Consensus 74 k~~~~V~eaaVvGVpd~~~~ge~~~A~Vv~~g~~~~~e~l~~-~l~~~Lp~ykvP~~v~~v~eLP~T~tGKi~K~~Lr~~ 152 (191)
|.||+|+|++++ ..|+.++|+|+..+.....+++.+ +++++||+|++|+.|.++++||+|++|||+|++||++
T Consensus 453 -----V~~a~v~~~~~~-~~~~~l~a~vv~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~~~~lP~t~~GKi~R~~lr~~ 526 (534)
T d1v25a_ 453 -----VKEAAVVAIPHP-KWQERPLAVVVPRGEKPTPEELNEHLLKAGFAKWQLPDAYVFAEEIPRTSAGKFLKRALREQ 526 (534)
T ss_dssp ---------CEEEEECS-SSSEEEEECC-------------------CCCTTTSCSBC--------------CCTTHHHH
T ss_pred -----cceEEEEEEECC-CCCeEEEEEEEeCCCCCCHHHHHHHHHHhcCCcCCCccEEEEECCCCCCCCccccHHHHHHH
Confidence 999999999987 467888888883333334455554 5888999999999999999999999999999999987
Q ss_pred cCC
Q psy8157 153 GFD 155 (191)
Q Consensus 153 ~~~ 155 (191)
..+
T Consensus 527 ~~~ 529 (534)
T d1v25a_ 527 YKN 529 (534)
T ss_dssp STT
T ss_pred HHh
Confidence 644
No 8
>d1rbli_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
Probab=39.01 E-value=43 Score=22.64 Aligned_cols=39 Identities=10% Similarity=-0.014 Sum_probs=29.1
Q ss_pred hHHHHHHHHHhCCCcccceeeeEEEEEEecCCCCCceEEEEEE-cCCC
Q psy8157 60 IADIFREHAVRSPNKVIFMFENTEWTAQQVPGYEGRAGMAAIL-DINK 106 (191)
Q Consensus 60 Ve~~~e~~l~~hP~k~~~~V~eaaVvGVpd~~~~ge~~~A~Vv-~~g~ 106 (191)
|-.-+++++..||+ .-+-++|+.. .....++.+|+ +||.
T Consensus 70 Vl~ele~c~~~~p~------~YVRliG~D~--~~q~r~~~fIV~RP~~ 109 (109)
T d1rbli_ 70 VLDEVRECRSEYGD------CYIRVAGFDN--IKECQTSSFIVHRPGR 109 (109)
T ss_dssp HHHHHHHHHHHCTT------SEEEEEEEET--TTTEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhCCc------CEEEEEEEeC--CCCEEEEEEEEeCCCC
Confidence 33346789999999 6788999974 34667789998 8763
No 9
>d1bwvs_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Galdieria partita [TaxId: 83374]}
Probab=30.91 E-value=79 Score=22.16 Aligned_cols=42 Identities=5% Similarity=-0.179 Sum_probs=29.1
Q ss_pred hHHHHHHHHHhCCCcccceeeeEEEEEEecCCCCCceEEEEEE-cCCCC
Q psy8157 60 IADIFREHAVRSPNKVIFMFENTEWTAQQVPGYEGRAGMAAIL-DINKS 107 (191)
Q Consensus 60 Ve~~~e~~l~~hP~k~~~~V~eaaVvGVpd~~~~ge~~~A~Vv-~~g~~ 107 (191)
|-.-+++++..||+ .-+-++|+..-......++.+|| +|+..
T Consensus 64 Vl~Ele~C~k~~p~------~YVRliGfDn~rq~Q~~~~sfIV~RP~~~ 106 (138)
T d1bwvs_ 64 VLFEINACRKARSN------FYIKVVGFSSVRGIESTIISFIVNRPKHE 106 (138)
T ss_dssp HHHHHHHHHHHCTT------SEEEEEEEECCTTTCEEEEEEEEECCSCC
T ss_pred HHHHHHHHHHHCCc------ceEEEEEEeCccceeEEEEEEEEeCCCCC
Confidence 44446788999999 67889999753223334689999 76543
No 10
>d1bxni_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Alcaligenes eutrophus [TaxId: 106590]}
Probab=29.77 E-value=24 Score=24.79 Aligned_cols=42 Identities=17% Similarity=-0.001 Sum_probs=28.5
Q ss_pred hHHHHHHHHHhCCCcccceeeeEEEEEEecCCCCCceEEEEEE-cCCCC
Q psy8157 60 IADIFREHAVRSPNKVIFMFENTEWTAQQVPGYEGRAGMAAIL-DINKS 107 (191)
Q Consensus 60 Ve~~~e~~l~~hP~k~~~~V~eaaVvGVpd~~~~ge~~~A~Vv-~~g~~ 107 (191)
|-.-+++++.+||+ .-+-++|+.........++.+|| +|+..
T Consensus 64 Vl~ele~c~~e~p~------~YVRliG~D~~r~~q~~~~sfIV~RP~~~ 106 (129)
T d1bxni_ 64 ILMEINNARNTFPN------HYIRVTAFDSTHTVESVVMSFIVNRPADE 106 (129)
T ss_dssp HHHHHHHHHHHCSS------SEEEEEEECTTTCCEEEEEECCCCGGGSC
T ss_pred HHHHHHHHHHHCCc------CEEEEEEEeCCCceEEeEEEEEEECCCCC
Confidence 33335789999999 67889999643222334678888 76543
No 11
>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.40 E-value=24 Score=22.34 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=16.7
Q ss_pred CCCHHHHHHHHHhcCCCCCccc
Q psy8157 107 SLDVTAVSEGIKKALPSYARPL 128 (191)
Q Consensus 107 ~~~~e~l~~~l~~~Lp~ykvP~ 128 (191)
.+++++ .++|..+||+|.-|+
T Consensus 32 ~L~peq-aeyc~~~M~~y~~~~ 52 (73)
T d1h8ba_ 32 ELPPDQ-AQYCIKRMPAYSGPG 52 (73)
T ss_dssp HSCHHH-HHHHHHHSCSCCCSS
T ss_pred hcCHHH-HHHHHHHCcccCCCC
Confidence 356666 499999999998875
Done!