Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>psy8162
MNYVAKVGASPFNPVQKVLFDQDLTPYNFTTNKPKPLLSRFLSLPNFPNLISSSDIAPYV
RTVPPWSSSSPPVDLSLGKDRKKDTPPVVFQQLFAGVINSKYVNHTICYTDGSKTMNSTS
CAYSINDVISSSQLNPVNSIFSAELIAIYLCLEAITVHPSDHFLIVSDSRSALAALSNVS
FTNPLVSKVYSCWDLLKTLNKDVHFVLKPSQSALAALSNVSFTNPLVSKVYSCWDLLKTL
NKDVHFLWCPSHCGIRGNEAVDEAARNPVNPARLKLCSPDDFKPIAASMVKKEWQNQWDI
IPITNKLKSIKPLIEHWNTSWLNDKK

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy8162
        (326 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ASPGD|ASPL0000075333 - symbol:AN10625 species:162425 "Eme...    94  0.00052   2


>ASPGD|ASPL0000075333 [details] [associations]
            symbol:AN10625 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR002156 InterPro:IPR012337 Pfam:PF00075 PROSITE:PS50879
            GO:GO:0003676 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0004523
            EnsemblFungi:CADANIAT00005305 Uniprot:C8V7Z8
        Length = 486

 Score = 94 (38.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
 Identities = 29/104 (27%), Positives = 43/104 (41%)

Query:   206 VLKPSQSALAALSNVSFTNPLVSKVYSCWDLLKTLNK------DVHFLWCPSHCGIRGNE 259
             +   +Q+ L AL N        S  Y    ++  LNK      +VHF W P+H G+ GNE
Sbjct:   246 IFTDNQATLQALRNPGSQ----SGQYILEAIIMALNKGRKAGLNVHFRWIPAHRGVEGNE 301

Query:   260 AVDEAARNPVNPARLK-----LCSPDDFKPIAASMVKKEWQNQW 298
               D  A+      R++     +      K  A  +V   W+N W
Sbjct:   302 QADRRAKEATGWRRIRGHRGRMTIRSAVKRRAHEVVNARWENDW 345

 Score = 65 (27.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query:   109 YTDGSKTMNSTSCAYSI--NDVISSSQL---NPVNSIFSAELIAIYLCLEAITVHPSDHF 163
             YTDGS  +N    A +I    +IS S        ++++ AEL  I L L  I      H 
Sbjct:   186 YTDGSG-INGRVGAAAICPKYLISRSSYMGQQSESTVYVAELQGILLALVIILQRQMQHA 244

Query:   164 LIVSDSRSALAALSN 178
             +I +D+++ L AL N
Sbjct:   245 VIFTDNQATLQALRN 259


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      326       317   0.00083  116 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  238 KB (2127 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.30u 0.11s 25.41t   Elapsed:  00:00:01
  Total cpu time:  25.30u 0.11s 25.41t   Elapsed:  00:00:01
  Start:  Thu Aug 15 16:03:42 2013   End:  Thu Aug 15 16:03:43 2013

Back to top