BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8172
(98 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328718000|ref|XP_001952725.2| PREDICTED: hypothetical protein LOC100167706 [Acyrthosiphon pisum]
Length = 1341
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PSN L+S++Q K YLQTQGTCKCGLECP QC+ VF+FDAK
Sbjct: 91 PSNAVLNSLDQAKIYLQTQGTCKCGLECPFQCEHVFNFDAK 131
>gi|242011645|ref|XP_002426558.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510695|gb|EEB13820.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1690
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAKPRERATEVHEPSEPAVCD 95
P+N ALSS+EQ+K YLQT GTCKCGLECP+ C+SVF+F+ K R + + + +C+
Sbjct: 3 PTNIALSSIEQIKMYLQTMGTCKCGLECPVNCESVFNFNPKVISRPWDSSDSEQTRLCN 61
>gi|395744516|ref|XP_002823479.2| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Pongo abelii]
Length = 1044
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 29 GFWKQTTRPSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
G RPS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 50 GRPNHGPRPSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 96
>gi|383847152|ref|XP_003699219.1| PREDICTED: uncharacterized protein LOC100879726 [Megachile
rotundata]
Length = 2057
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAKPRERA 82
PS+TAL S++Q+K YL T GTCKCGLECPL+ + VF+FD P+E A
Sbjct: 3 PSSTALGSLDQLKEYLTTVGTCKCGLECPLRPEQVFNFD--PKELA 46
>gi|307184791|gb|EFN71105.1| Methyl-CpG-binding domain protein 5 [Camponotus floridanus]
Length = 396
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS+TAL S++Q+K YL T GTCKCGLECPL+ + VF+FD K
Sbjct: 213 PSSTALGSLDQLKEYLTTVGTCKCGLECPLRPEQVFNFDPK 253
>gi|328785762|ref|XP_392332.4| PREDICTED: hypothetical protein LOC408801, partial [Apis
mellifera]
Length = 2081
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS+TAL S++Q+K YL T GTCKCGLECPL+ + VF+FD K
Sbjct: 1 PSSTALGSLDQLKEYLTTVGTCKCGLECPLRPEQVFNFDPK 41
>gi|91077136|ref|XP_971386.1| PREDICTED: similar to rCG37751 [Tribolium castaneum]
gi|270001717|gb|EEZ98164.1| hypothetical protein TcasGA2_TC000591 [Tribolium castaneum]
Length = 1730
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 32/41 (78%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PSNTALSS EQVK YL T GTCKCGLEC + D+ F+FD K
Sbjct: 188 PSNTALSSPEQVKEYLLTSGTCKCGLECHFKYDNTFNFDPK 228
>gi|380021683|ref|XP_003694688.1| PREDICTED: uncharacterized protein LOC100871501 [Apis florea]
Length = 546
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAKPRERATE 84
PS+TAL S++Q+K YL T GTCKCGLECPL+ + VF+FD K + TE
Sbjct: 469 PSSTALGSLDQLKEYLTTVGTCKCGLECPLRPEQVFNFDPKDKILLTE 516
>gi|301608308|ref|XP_002933744.1| PREDICTED: hypothetical protein LOC100485569 [Xenopus (Silurana)
tropicalis]
Length = 1323
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS T L+SM+Q++AYL T GTCKCGLECPL VF+FD +
Sbjct: 39 PSGTVLTSMDQLRAYLVTDGTCKCGLECPLNIYKVFNFDPR 79
>gi|186910204|ref|NP_001119549.1| methyl-CpG binding domain protein 6 [Xenopus (Silurana)
tropicalis]
gi|183985922|gb|AAI66190.1| mbd6 protein [Xenopus (Silurana) tropicalis]
Length = 1365
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS T L+SM+Q++AYL T GTCKCGLECPL VF+FD +
Sbjct: 39 PSGTVLTSMDQLRAYLVTDGTCKCGLECPLNIYKVFNFDPR 79
>gi|432848620|ref|XP_004066436.1| PREDICTED: methyl-CpG-binding domain protein 5-like [Oryzias
latipes]
Length = 1419
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS + LSS+EQVK YL T GTCKCGLECPL VF+FD
Sbjct: 38 PSGSVLSSLEQVKTYLLTDGTCKCGLECPLILHKVFNFD 76
>gi|345489243|ref|XP_001604881.2| PREDICTED: hypothetical protein LOC100121276 [Nasonia vitripennis]
Length = 2372
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS+TAL S++Q+K YL T GTCKCGL+CPL+ + VF+FD K
Sbjct: 352 PSSTALGSLDQLKEYLTTAGTCKCGLDCPLRPEQVFNFDPK 392
>gi|15620833|dbj|BAB67780.1| KIAA1887 protein [Homo sapiens]
Length = 967
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 3 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 41
>gi|348518231|ref|XP_003446635.1| PREDICTED: methyl-CpG-binding domain protein 5-like [Oreochromis
niloticus]
Length = 1427
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LSS+EQV+ YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSVLSSLEQVRTYLLTDGTCKCGLECPLILQKVFNFDPGAAVKQRTAE 88
>gi|402886584|ref|XP_003906708.1| PREDICTED: methyl-CpG-binding domain protein 6 [Papio anubis]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|46852161|ref|NP_443129.3| methyl-CpG-binding domain protein 6 [Homo sapiens]
gi|29336893|sp|Q96DN6.2|MBD6_HUMAN RecName: Full=Methyl-CpG-binding domain protein 6; AltName:
Full=Methyl-CpG-binding protein MBD6
gi|119617430|gb|EAW97024.1| methyl-CpG binding domain protein 6, isoform CRA_a [Homo sapiens]
gi|119617431|gb|EAW97025.1| methyl-CpG binding domain protein 6, isoform CRA_a [Homo sapiens]
gi|261858084|dbj|BAI45564.1| methyl-CpG binding domain protein 6 [synthetic construct]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|397508967|ref|XP_003824909.1| PREDICTED: methyl-CpG-binding domain protein 6 [Pan paniscus]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|332838862|ref|XP_509166.3| PREDICTED: methyl-CpG-binding domain protein 6 [Pan troglodytes]
gi|410213706|gb|JAA04072.1| methyl-CpG binding domain protein 6 [Pan troglodytes]
gi|410306708|gb|JAA31954.1| methyl-CpG binding domain protein 6 [Pan troglodytes]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|16551795|dbj|BAB71176.1| unnamed protein product [Homo sapiens]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|358412274|ref|XP_003582271.1| PREDICTED: methyl-CpG-binding domain protein 6-like [Bos taurus]
Length = 1007
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|41351092|gb|AAH65530.1| Methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|395835300|ref|XP_003790620.1| PREDICTED: methyl-CpG-binding domain protein 6 [Otolemur
garnettii]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|355564397|gb|EHH20897.1| Methyl-CpG-binding protein MBD6 [Macaca mulatta]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|426373180|ref|XP_004053490.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Gorilla gorilla gorilla]
Length = 1007
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|355786243|gb|EHH66426.1| Methyl-CpG-binding protein MBD6 [Macaca fascicularis]
gi|383412465|gb|AFH29446.1| methyl-CpG-binding domain protein 6 [Macaca mulatta]
gi|387540636|gb|AFJ70945.1| methyl-CpG-binding domain protein 6 [Macaca mulatta]
Length = 1003
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|301761330|ref|XP_002916062.1| PREDICTED: methyl-CpG-binding domain protein 6-like [Ailuropoda
melanoleuca]
Length = 1008
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|440901106|gb|ELR52104.1| Methyl-CpG-binding domain protein 6 [Bos grunniens mutus]
Length = 1007
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|426224863|ref|XP_004006588.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Ovis aries]
Length = 1012
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|357623013|gb|EHJ74335.1| hypothetical protein KGM_20479 [Danaus plexippus]
Length = 2108
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAKPRERATEVHEPSE 90
PS TALS+ Q++ YLQT GTCKCGL CPL+ ++ FSFD K + +V +E
Sbjct: 296 PSGTALSNYTQLREYLQTAGTCKCGLPCPLRPETAFSFDPKVSSKPYQVAAGAE 349
>gi|380792095|gb|AFE67923.1| methyl-CpG-binding domain protein 6, partial [Macaca mulatta]
Length = 881
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Query: 31 WKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
W++ R PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 25 WQRCVREGAVLYISPSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|359065517|ref|XP_003586124.1| PREDICTED: methyl-CpG-binding domain protein 6-like [Bos taurus]
Length = 1007
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|403268951|ref|XP_003926524.1| PREDICTED: methyl-CpG-binding domain protein 6 [Saimiri
boliviensis boliviensis]
Length = 1001
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|390467853|ref|XP_002752700.2| PREDICTED: methyl-CpG-binding domain protein 6 [Callithrix
jacchus]
Length = 1002
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|354490808|ref|XP_003507548.1| PREDICTED: methyl-CpG-binding domain protein 6-like [Cricetulus
griseus]
gi|344246174|gb|EGW02278.1| Methyl-CpG-binding domain protein 6 [Cricetulus griseus]
Length = 1006
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|74182631|dbj|BAE34671.1| unnamed protein product [Mus musculus]
Length = 1003
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 41 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 79
>gi|66364613|gb|AAH96027.1| Mbd6 protein, partial [Mus musculus]
Length = 969
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 5 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 43
>gi|341940942|sp|Q3TY92.2|MBD6_MOUSE RecName: Full=Methyl-CpG-binding domain protein 6; AltName:
Full=Methyl-CpG-binding protein MBD6
Length = 1003
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 41 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 79
>gi|70778938|ref|NP_149063.2| methyl-CpG-binding domain protein 6 [Mus musculus]
Length = 1005
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 41 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 79
>gi|281604110|ref|NP_001164037.1| methyl-CpG binding domain protein 6 [Rattus norvegicus]
Length = 1005
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|73968566|ref|XP_859707.1| PREDICTED: methyl-CpG-binding domain protein 6 isoform 5 [Canis
lupus familiaris]
Length = 1007
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|410964913|ref|XP_003988997.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Felis catus]
Length = 1007
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|281353300|gb|EFB28884.1| hypothetical protein PANDA_004124 [Ailuropoda melanoleuca]
Length = 987
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|332206749|ref|XP_003252457.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Nomascus leucogenys]
Length = 859
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|344266269|ref|XP_003405203.1| PREDICTED: methyl-CpG-binding domain protein 6 [Loxodonta
africana]
Length = 996
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|395540783|ref|XP_003772330.1| PREDICTED: methyl-CpG-binding domain protein 6 [Sarcophilus
harrisii]
Length = 1002
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|417405574|gb|JAA49496.1| Putative rhoa gtpase effector dia/diaphanous [Desmodus rotundus]
Length = 1005
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|432112055|gb|ELK35083.1| Methyl-CpG-binding domain protein 6 [Myotis davidii]
Length = 444
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Query: 31 WKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
W++ R PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 25 WQRCVREGAVLYISPSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|431914053|gb|ELK15315.1| Methyl-CpG-binding domain protein 6 [Pteropus alecto]
Length = 718
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Query: 31 WKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
W++ R PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 25 WQRCVREGAVLYISPSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|444509397|gb|ELV09234.1| Methyl-CpG-binding domain protein 6 [Tupaia chinensis]
Length = 362
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|338726431|ref|XP_001917827.2| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6-like [Equus caballus]
Length = 1006
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ + YL + GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRTYLLSDGTCKCGLECPLNVPKVFNFD 77
>gi|351704723|gb|EHB07642.1| Methyl-CpG-binding domain protein 6 [Heterocephalus glaber]
Length = 1007
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T LSS+EQ ++YL GTCKCGLECPL VF+FD
Sbjct: 39 PSGTELSSLEQTRSYLLRDGTCKCGLECPLNVPKVFNFD 77
>gi|194384740|dbj|BAG59530.1| unnamed protein product [Homo sapiens]
Length = 150
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSF---DAKPRERATEVHEPS 89
PS T LSS+EQ ++YL + GTCKCGLECPL VF+F + PR R H PS
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFGPWEGPPRWRGLG-HPPS 93
>gi|124504550|gb|AAI28887.1| Zgc:158479 protein [Danio rerio]
Length = 792
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 30/39 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS + LS +EQVK+YL T GTCKCGLECPL VF+FD
Sbjct: 32 PSGSVLSCLEQVKSYLLTDGTCKCGLECPLILPKVFNFD 70
>gi|301628773|ref|XP_002943521.1| PREDICTED: methyl-CpG-binding domain protein 5 [Xenopus
(Silurana) tropicalis]
Length = 1273
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK+YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSHLSCLEQVKSYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|119631955|gb|EAX11550.1| methyl-CpG binding domain protein 5, isoform CRA_a [Homo sapiens]
Length = 950
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|449276870|gb|EMC85231.1| Methyl-CpG-binding domain protein 5, partial [Columba livia]
Length = 1718
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 40 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLVLPKVFNFDPGAAVKQRTAE 89
>gi|326923144|ref|XP_003207801.1| PREDICTED: methyl-CpG-binding domain protein 5-like, partial
[Meleagris gallopavo]
Length = 1025
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLVLPKVFNFDPGAAVKQRTAE 88
>gi|351702429|gb|EHB05348.1| Methyl-CpG-binding domain protein 5 [Heterocephalus glaber]
Length = 1731
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|355750529|gb|EHH54856.1| hypothetical protein EGM_03948 [Macaca fascicularis]
Length = 1732
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|402888310|ref|XP_003907510.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 2 [Papio
anubis]
gi|355564878|gb|EHH21367.1| hypothetical protein EGK_04410 [Macaca mulatta]
Length = 1732
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|281351683|gb|EFB27267.1| hypothetical protein PANDA_013013 [Ailuropoda melanoleuca]
Length = 1623
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 4 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 53
>gi|307195607|gb|EFN77457.1| Methyl-CpG-binding domain protein 5 [Harpegnathos saltator]
Length = 50
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS+TAL S++Q+K YL T GTCKCGLECP + + VF+FD K
Sbjct: 1 PSSTALGSLDQLKEYLTTVGTCKCGLECPFRPEHVFNFDPK 41
>gi|426221130|ref|XP_004004764.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 2 [Ovis
aries]
Length = 1731
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|395732341|ref|XP_002812513.2| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
5 [Pongo abelii]
Length = 1731
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|348585753|ref|XP_003478635.1| PREDICTED: methyl-CpG-binding domain protein 5-like [Cavia
porcellus]
Length = 1674
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|440906635|gb|ELR56874.1| Methyl-CpG-binding domain protein 5 [Bos grunniens mutus]
Length = 1730
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|431894805|gb|ELK04598.1| Methyl-CpG-binding domain protein 5 [Pteropus alecto]
Length = 1607
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|410968620|ref|XP_003990800.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 2 [Felis
catus]
Length = 1733
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|291391534|ref|XP_002712195.1| PREDICTED: methyl-CpG binding domain protein 5 isoform 1
[Oryctolagus cuniculus]
Length = 1732
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|395519527|ref|XP_003763896.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 2
[Sarcophilus harrisii]
Length = 1732
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 38 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 87
>gi|354492067|ref|XP_003508173.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 1
[Cricetulus griseus]
Length = 1733
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|395840422|ref|XP_003793058.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 2
[Otolemur garnettii]
Length = 1732
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|449507574|ref|XP_002198624.2| PREDICTED: methyl-CpG-binding domain protein 5 [Taeniopygia
guttata]
Length = 1713
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLVLPKVFNFDPGAAVKQRTAE 88
>gi|296204832|ref|XP_002749502.1| PREDICTED: methyl-CpG-binding domain protein 5 [Callithrix
jacchus]
Length = 1499
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|152013048|gb|AAI50265.1| Methyl-CpG binding domain protein 5 [Homo sapiens]
gi|307684408|dbj|BAJ20244.1| methyl-CpG binding domain protein 5 [synthetic construct]
Length = 1494
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|118093882|ref|XP_422153.2| PREDICTED: methyl-CpG-binding domain protein 5 [Gallus gallus]
Length = 1501
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLVLPKVFNFDPGAAVKQRTAE 88
>gi|410217178|gb|JAA05808.1| methyl-CpG binding domain protein 5 [Pan troglodytes]
gi|410265738|gb|JAA20835.1| methyl-CpG binding domain protein 5 [Pan troglodytes]
gi|410288596|gb|JAA22898.1| methyl-CpG binding domain protein 5 [Pan troglodytes]
Length = 1494
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|403259023|ref|XP_003922037.1| PREDICTED: methyl-CpG-binding domain protein 5 [Saimiri
boliviensis boliviensis]
Length = 1499
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|388454619|ref|NP_001253636.1| methyl-CpG-binding domain protein 5 [Macaca mulatta]
gi|402888308|ref|XP_003907509.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 1 [Papio
anubis]
gi|380814616|gb|AFE79182.1| methyl-CpG-binding domain protein 5 [Macaca mulatta]
Length = 1499
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|426337364|ref|XP_004032678.1| PREDICTED: methyl-CpG-binding domain protein 5 [Gorilla gorilla
gorilla]
Length = 1494
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|38202209|ref|NP_060798.2| methyl-CpG-binding domain protein 5 [Homo sapiens]
gi|296439306|sp|Q9P267.3|MBD5_HUMAN RecName: Full=Methyl-CpG-binding domain protein 5; AltName:
Full=Methyl-CpG-binding protein MBD5
gi|119631957|gb|EAX11552.1| methyl-CpG binding domain protein 5, isoform CRA_c [Homo sapiens]
gi|146289922|gb|ABQ18300.1| methyl-CpG binding domain protein 5 [Homo sapiens]
Length = 1494
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|7959183|dbj|BAA95985.1| KIAA1461 protein [Homo sapiens]
Length = 1498
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 43 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 92
>gi|426221128|ref|XP_004004763.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 1 [Ovis
aries]
Length = 1498
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|397491594|ref|XP_003816738.1| PREDICTED: methyl-CpG-binding domain protein 5 [Pan paniscus]
gi|410333403|gb|JAA35648.1| methyl-CpG binding domain protein 5 [Pan troglodytes]
Length = 1494
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|332814450|ref|XP_003309303.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
5 [Pan troglodytes]
Length = 1494
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|354492069|ref|XP_003508174.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 2
[Cricetulus griseus]
Length = 1500
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|73984308|ref|XP_541030.2| PREDICTED: methyl-CpG-binding domain protein 5 isoform 1 [Canis
lupus familiaris]
Length = 1500
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|410968618|ref|XP_003990799.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 1 [Felis
catus]
Length = 1500
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|332236967|ref|XP_003267672.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
5 [Nomascus leucogenys]
Length = 1499
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|395840420|ref|XP_003793057.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 1
[Otolemur garnettii]
Length = 1499
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|300796046|ref|NP_001178197.1| methyl-CpG-binding domain protein 5 [Bos taurus]
gi|296490621|tpg|DAA32734.1| TPA: methyl-CpG binding domain protein 5 [Bos taurus]
Length = 1498
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|301776769|ref|XP_002923802.1| PREDICTED: methyl-CpG-binding domain protein 5-like [Ailuropoda
melanoleuca]
Length = 1497
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|47220446|emb|CAG03226.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1075
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSF 74
PS ALSS+E+VK YL + GTCKCGLECPL VF+F
Sbjct: 42 PSGAALSSLEEVKTYLLSDGTCKCGLECPLIVHKVFNF 79
>gi|291391536|ref|XP_002712196.1| PREDICTED: methyl-CpG binding domain protein 5 isoform 2
[Oryctolagus cuniculus]
Length = 1499
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|395519525|ref|XP_003763895.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 1
[Sarcophilus harrisii]
Length = 1499
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 38 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 87
>gi|149730607|ref|XP_001488025.1| PREDICTED: methyl-CpG-binding domain protein 5 isoform 1 [Equus
caballus]
Length = 1499
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS +EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|125819496|ref|XP_690360.2| PREDICTED: hypothetical protein LOC561863 [Danio rerio]
Length = 1277
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS T L S+++V+ YL+T GTCKCGLECPL + VF+FD
Sbjct: 40 PSGTVLQSVDEVRVYLRTDGTCKCGLECPLVPNKVFNFD 78
>gi|194385756|dbj|BAG65253.1| unnamed protein product [Homo sapiens]
Length = 1086
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 29/39 (74%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS + LS +EQVK YL T GTCKCGLECPL VF+FD
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFD 77
>gi|327280568|ref|XP_003225024.1| PREDICTED: methyl-CpG-binding domain protein 5-like [Anolis
carolinensis]
Length = 1501
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 29/39 (74%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS + LS +EQVK YL T GTCKCGLECPL VF+FD
Sbjct: 39 PSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFD 77
>gi|50510937|dbj|BAD32454.1| mKIAA1461 protein [Mus musculus]
Length = 1753
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS ++QVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 64 PSGSLLSCLDQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 113
>gi|148694928|gb|EDL26875.1| mCG1040654, isoform CRA_a [Mus musculus]
Length = 1622
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS ++QVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLDQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|119433655|ref|NP_084200.1| methyl-CpG-binding domain protein 5 [Mus musculus]
Length = 1728
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS ++QVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLDQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|149047850|gb|EDM00466.1| rCG37751 [Rattus norvegicus]
Length = 1624
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS ++QVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLDQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|327488265|sp|B1AYB6.1|MBD5_MOUSE RecName: Full=Methyl-CpG-binding domain protein 5; AltName:
Full=Methyl-CpG-binding protein MBD5
gi|187951033|gb|AAI38376.1| Mbd5 protein [Mus musculus]
gi|187951035|gb|AAI38379.1| Mbd5 protein [Mus musculus]
Length = 1498
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
PS + LS ++QVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 39 PSGSLLSCLDQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88
>gi|241855072|ref|XP_002415992.1| hypothetical protein IscW_ISCW014033 [Ixodes scapularis]
gi|215510206|gb|EEC19659.1| hypothetical protein IscW_ISCW014033 [Ixodes scapularis]
Length = 757
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
PS+ L S+ +V AYLQT+G CKCGL+CPL D FSFD
Sbjct: 99 PSHHQLRSVGEVAAYLQTEGVCKCGLDCPLALDRTFSFD 137
>gi|260794234|ref|XP_002592114.1| hypothetical protein BRAFLDRAFT_84983 [Branchiostoma floridae]
gi|229277329|gb|EEN48125.1| hypothetical protein BRAFLDRAFT_84983 [Branchiostoma floridae]
Length = 1947
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
P + L S++QV YLQ GTCKCGL CPLQ + VF+FD
Sbjct: 46 PDGSCLVSVDQVNQYLQKDGTCKCGLGCPLQVNKVFNFD 84
>gi|443704667|gb|ELU01611.1| hypothetical protein CAPTEDRAFT_227901 [Capitella teleta]
Length = 1291
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAKPRERATEVHEPSE 90
PS L S+ ++ YL ++GTCKCGLECPLQ D FSF+ + + EP++
Sbjct: 107 PSGYRLPSLSHIQQYLLSEGTCKCGLECPLQLDRTFSFNPQVSSKPWNPQEPND 160
>gi|427789979|gb|JAA60441.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 871
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDA 76
PSN L S+++V YLQT G CKCGL+CPL + F+FDA
Sbjct: 124 PSNHQLRSLDEVARYLQTDGVCKCGLDCPLSLEKTFNFDA 163
>gi|427792557|gb|JAA61730.1| Putative gpi-anchored cell surface glycoprotein flocculin, partial
[Rhipicephalus pulchellus]
Length = 1008
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDA 76
PSN L S+++V YLQT G CKCGL+CPL + F+FDA
Sbjct: 207 PSNHQLRSLDEVARYLQTDGVCKCGLDCPLSLEKTFNFDA 246
>gi|390358022|ref|XP_003729161.1| PREDICTED: uncharacterized protein LOC100890897
[Strongylocentrotus purpuratus]
Length = 1779
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDA----KPR 79
PS L S E V+ YL + GTCKCGLECP+ D VF+FD KPR
Sbjct: 24 PSGQLLQSTEAVQTYLSSDGTCKCGLECPIILDKVFNFDPRVFCKPR 70
>gi|347964339|ref|XP_001689392.2| AGAP000707-PA [Anopheles gambiae str. PEST]
gi|333467484|gb|EDO64298.2| AGAP000707-PA [Anopheles gambiae str. PEST]
Length = 1143
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PSN L + EQVK YL + GTCKCGL CP + F FDA+
Sbjct: 1 PSNIVLHNYEQVKEYLLSSGTCKCGLPCPFNPERFFQFDAQ 41
>gi|195331434|ref|XP_002032406.1| GM23531 [Drosophila sechellia]
gi|194121349|gb|EDW43392.1| GM23531 [Drosophila sechellia]
Length = 1643
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 243 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 302
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 303 LFDFNAQ 309
>gi|195573273|ref|XP_002104618.1| GD18343 [Drosophila simulans]
gi|194200545|gb|EDX14121.1| GD18343 [Drosophila simulans]
Length = 1645
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 242 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 301
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 302 LFDFNAQ 308
>gi|442620734|ref|NP_001262889.1| six-banded, isoform I [Drosophila melanogaster]
gi|440217809|gb|AGB96269.1| six-banded, isoform I [Drosophila melanogaster]
Length = 1291
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 240 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 299
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 300 LFDFNAQ 306
>gi|386766357|ref|NP_732911.2| six-banded, isoform G [Drosophila melanogaster]
gi|383292910|gb|AAF56201.3| six-banded, isoform G [Drosophila melanogaster]
Length = 1362
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 240 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 299
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 300 LFDFNAQ 306
>gi|161078552|ref|NP_001097892.1| six-banded, isoform C [Drosophila melanogaster]
gi|158030359|gb|ABW08741.1| six-banded, isoform C [Drosophila melanogaster]
Length = 1385
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 240 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 299
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 300 LFDFNAQ 306
>gi|410906491|ref|XP_003966725.1| PREDICTED: methyl-CpG-binding domain protein 5-like [Takifugu
rubripes]
Length = 1396
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 46 EQVKAYLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
EQVK YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 48 EQVKTYLLTDGTCKCGLECPLILHKVFNFDPGASVKQRTAE 88
>gi|1370076|emb|CAA66887.1| TF125 [Drosophila melanogaster]
Length = 1182
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 37 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 96
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 97 LFDFNAQ 103
>gi|386766355|ref|NP_001247271.1| six-banded, isoform F [Drosophila melanogaster]
gi|383292909|gb|AFH06589.1| six-banded, isoform F [Drosophila melanogaster]
Length = 1426
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 240 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 299
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 300 LFDFNAQ 306
>gi|297262777|ref|XP_001100706.2| PREDICTED: methyl-CpG-binding domain protein 6-like [Macaca
mulatta]
Length = 774
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSV 71
PS T LSS+EQ ++YL + GTCKCGLECPL V
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKV 73
>gi|161078554|ref|NP_001097893.1| six-banded, isoform D [Drosophila melanogaster]
gi|386766353|ref|NP_788726.2| six-banded, isoform E [Drosophila melanogaster]
gi|158030360|gb|ABW08742.1| six-banded, isoform D [Drosophila melanogaster]
gi|383292908|gb|AAO41596.2| six-banded, isoform E [Drosophila melanogaster]
Length = 1583
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 240 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 299
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 300 LFDFNAQ 306
>gi|16198321|gb|AAL13996.1| SD04244p [Drosophila melanogaster]
Length = 1371
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 37 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 96
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 97 LFDFNAQ 103
>gi|442620729|ref|NP_001262888.1| six-banded, isoform H [Drosophila melanogaster]
gi|440217808|gb|AGB96268.1| six-banded, isoform H [Drosophila melanogaster]
Length = 1606
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 240 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEY 299
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 300 LFDFNAQ 306
>gi|194910148|ref|XP_001982082.1| GG12394 [Drosophila erecta]
gi|190656720|gb|EDV53952.1| GG12394 [Drosophila erecta]
Length = 1372
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 37 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEF 96
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 97 LFDFNAQ 103
>gi|344257396|gb|EGW13500.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Cricetulus griseus]
Length = 1444
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFD 75
P T LSS+EQ ++YL + GTCKC LECPL VF+FD
Sbjct: 808 PKWTELSSLEQTRSYLLSDGTCKCDLECPLNVLMVFNFD 846
>gi|195503056|ref|XP_002098491.1| GE23912 [Drosophila yakuba]
gi|194184592|gb|EDW98203.1| GE23912 [Drosophila yakuba]
Length = 1380
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 20 TTTDYTSEVG-FWKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDS 70
T T Y + W++ T PS L + Q+K YL TQGTCKCGL CPL+ +
Sbjct: 40 TATSYNGNLAPGWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEF 99
Query: 71 VFSFDAK 77
+F F+A+
Sbjct: 100 LFDFNAQ 106
>gi|195449301|ref|XP_002072014.1| GK22622 [Drosophila willistoni]
gi|194168099|gb|EDW83000.1| GK22622 [Drosophila willistoni]
Length = 111
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
P+ L + Q+K YL TQGTCKCGL CPL+ + +F F+A+
Sbjct: 60 PTGKTLRTQYQIKDYLLTQGTCKCGLPCPLRPEYIFDFNAQ 100
>gi|157123516|ref|XP_001660182.1| hypothetical protein AaeL_AAEL009515 [Aedes aegypti]
gi|108874387|gb|EAT38612.1| AAEL009515-PA, partial [Aedes aegypti]
Length = 1157
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS AL + QVK YL + GTCKCGL CP + ++ F FD++
Sbjct: 1 PSGAALRNFNQVKEYLLSGGTCKCGLPCPFRPEAFFEFDSQ 41
>gi|194742754|ref|XP_001953866.1| GF17981 [Drosophila ananassae]
gi|190626903|gb|EDV42427.1| GF17981 [Drosophila ananassae]
Length = 1627
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS L + Q+K YL +QGTCKCGL CPL+ + +F F+A+
Sbjct: 256 PSGRTLRTQFQIKDYLLSQGTCKCGLPCPLRPEYLFDFNAQ 296
>gi|170033860|ref|XP_001844794.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874871|gb|EDS38254.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 856
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
PS L + QVK YL + GTCKCGL CP + ++ F FD++
Sbjct: 775 PSGAPLRNFNQVKEYLLSGGTCKCGLPCPFRPEAFFEFDSQ 815
>gi|449683783|ref|XP_002159270.2| PREDICTED: uncharacterized protein LOC100206251 [Hydra
magnipapillata]
Length = 462
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 21 TTDYTSEVGF-----WKQTTR--------PSNTALSSMEQVKAYLQTQGTCKCGLECPLQ 67
T D++ +V W + T P+ + ++ +E + YLQ GTCKCGL+CPLQ
Sbjct: 137 TRDFSEQVAVYVPRGWNRVTEKGLINYISPNKSRITCLEDMLFYLQYDGTCKCGLKCPLQ 196
Query: 68 CDSVFSFDAKPRERATEVHE 87
+ F+FD R ++ ++
Sbjct: 197 PEKAFNFDPNVMSRFSDEYD 216
>gi|405975830|gb|EKC40372.1| Methyl-CpG-binding domain protein 5 [Crassostrea gigas]
Length = 1768
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDA 76
PSN L S+E+V YL + TCKCGLECP+ F+FD
Sbjct: 339 PSNVPLCSIEEVNQYLLSDSTCKCGLECPVVVSKTFNFDV 378
>gi|195145130|ref|XP_002013549.1| GL23346 [Drosophila persimilis]
gi|194102492|gb|EDW24535.1| GL23346 [Drosophila persimilis]
Length = 1741
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
P+ L + Q+K YL TQGTCKCGL CPL+ + +F F+A+
Sbjct: 268 PTGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPECLFDFNAQ 308
>gi|198452357|ref|XP_001358738.2| GA12391, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131896|gb|EAL27881.2| GA12391, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1738
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
P+ L + Q+K YL TQGTCKCGL CPL+ + +F F+A+
Sbjct: 270 PTGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPECLFDFNAQ 310
>gi|195056093|ref|XP_001994947.1| GH17512 [Drosophila grimshawi]
gi|193892710|gb|EDV91576.1| GH17512 [Drosophila grimshawi]
Length = 1314
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
P+ L + Q+K YL TQGTCKCGL CPL+ + F F+A+
Sbjct: 63 PTGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEYFFDFNAR 103
>gi|390178105|ref|XP_003736566.1| GA12391, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859323|gb|EIM52639.1| GA12391, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1461
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
P+ L + Q+K YL TQGTCKCGL CPL+ + +F F+A+
Sbjct: 270 PTGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPECLFDFNAQ 310
>gi|195112302|ref|XP_002000713.1| GI10379 [Drosophila mojavensis]
gi|193917307|gb|EDW16174.1| GI10379 [Drosophila mojavensis]
Length = 1645
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
P+ L + Q+K YL TQGTCKCGL CPL+ + F F+A+
Sbjct: 284 PTGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEYFFDFNAQ 324
>gi|195391432|ref|XP_002054364.1| GJ22841 [Drosophila virilis]
gi|194152450|gb|EDW67884.1| GJ22841 [Drosophila virilis]
Length = 1620
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSFDAK 77
P+ L + Q+K YL TQGTCKCGL CPL+ + F F+A+
Sbjct: 292 PTGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEYFFDFNAQ 332
>gi|47207120|emb|CAF90835.1| unnamed protein product [Tetraodon nigroviridis]
Length = 563
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 25/43 (58%)
Query: 46 EQVKAYLQTQGTCKCGLECPLQCDSVFSFDAKPRERATEVHEP 88
EQV+ YL T GTCKCGLECPL V A+P R + P
Sbjct: 47 EQVQTYLLTDGTCKCGLECPLVLHKVCGNAAEPGGRRVGLASP 89
>gi|355701352|gb|AES01655.1| methyl-CpG binding domain protein 5 [Mustela putorius furo]
Length = 270
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 51 YLQTQGTCKCGLECPLQCDSVFSFD--AKPRERATE 84
YL T GTCKCGLECPL VF+FD A ++R E
Sbjct: 1 YLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 36
>gi|196013362|ref|XP_002116542.1| hypothetical protein TRIADDRAFT_60568 [Trichoplax adhaerens]
gi|190580818|gb|EDV20898.1| hypothetical protein TRIADDRAFT_60568 [Trichoplax adhaerens]
Length = 852
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 37 PSNTALSSMEQVKAYLQTQGTCKCGLECPLQCDSVFSF 74
P+ L +M V Y+ + GTCKC L+CPL D VF+F
Sbjct: 20 PTKDKLWNMSDVIKYVTSDGTCKCNLQCPLFLDRVFTF 57
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.127 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,494,314,917
Number of Sequences: 23463169
Number of extensions: 45443605
Number of successful extensions: 77122
Number of sequences better than 100.0: 143
Number of HSP's better than 100.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76976
Number of HSP's gapped (non-prelim): 146
length of query: 98
length of database: 8,064,228,071
effective HSP length: 67
effective length of query: 31
effective length of database: 6,492,195,748
effective search space: 201258068188
effective search space used: 201258068188
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)