Query psy8176
Match_columns 159
No_of_seqs 110 out of 353
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 20:33:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8176.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8176hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v5f_A Prolyl 4-hydroxylase su 99.5 4.5E-14 1.5E-18 98.0 7.9 60 99-159 2-61 (104)
2 1na3_A Designed protein CTPR2; 95.0 0.059 2E-06 33.4 5.5 29 102-130 9-37 (91)
3 2xev_A YBGF; tetratricopeptide 94.5 0.4 1.4E-05 31.4 9.2 31 102-132 76-106 (129)
4 2l6j_A TPR repeat-containing p 94.4 0.093 3.2E-06 33.6 5.5 28 103-130 5-32 (111)
5 4ga2_A E3 SUMO-protein ligase 93.4 0.16 5.4E-06 35.7 5.7 49 102-158 31-79 (150)
6 3upv_A Heat shock protein STI1 93.3 0.15 5.2E-06 33.9 5.2 49 102-158 38-86 (126)
7 3ma5_A Tetratricopeptide repea 93.2 0.22 7.6E-06 32.3 5.8 50 101-158 6-55 (100)
8 4gcn_A Protein STI-1; structur 92.9 0.32 1.1E-05 33.1 6.5 47 105-159 11-57 (127)
9 2kck_A TPR repeat; tetratricop 92.7 1.1 3.8E-05 27.9 8.7 52 102-159 40-92 (112)
10 2yhc_A BAMD, UPF0169 lipoprote 92.4 0.36 1.2E-05 35.8 6.7 53 101-158 3-55 (225)
11 1elr_A TPR2A-domain of HOP; HO 92.4 0.24 8.1E-06 32.1 5.0 57 102-159 38-94 (131)
12 3q49_B STIP1 homology and U bo 92.3 0.46 1.6E-05 31.5 6.5 30 101-130 8-37 (137)
13 3vtx_A MAMA; tetratricopeptide 92.2 0.32 1.1E-05 34.3 5.8 50 102-159 5-54 (184)
14 4gco_A Protein STI-1; structur 92.1 0.39 1.3E-05 32.7 6.1 48 103-158 14-61 (126)
15 3k9i_A BH0479 protein; putativ 92.1 0.31 1.1E-05 32.2 5.5 50 102-159 27-76 (117)
16 2lni_A Stress-induced-phosphop 92.1 0.48 1.6E-05 30.8 6.3 49 102-158 50-98 (133)
17 3nf1_A KLC 1, kinesin light ch 91.4 0.42 1.4E-05 35.8 6.0 74 85-159 10-84 (311)
18 3sz7_A HSC70 cochaperone (SGT) 91.2 0.55 1.9E-05 32.7 6.1 30 102-131 11-40 (164)
19 2yhc_A BAMD, UPF0169 lipoprote 91.0 1.7 5.8E-05 32.0 9.1 50 105-159 150-199 (225)
20 1na0_A Designed protein CTPR3; 91.0 0.53 1.8E-05 29.9 5.5 52 100-159 41-92 (125)
21 3rkv_A Putative peptidylprolyl 90.8 0.27 9.3E-06 34.3 4.2 57 102-159 11-78 (162)
22 3qky_A Outer membrane assembly 90.8 0.73 2.5E-05 34.5 6.9 27 105-131 55-81 (261)
23 2kat_A Uncharacterized protein 90.7 0.73 2.5E-05 30.0 6.1 28 103-130 20-47 (115)
24 2xev_A YBGF; tetratricopeptide 90.4 0.85 2.9E-05 29.8 6.3 48 107-159 44-91 (129)
25 3ro3_A PINS homolog, G-protein 90.0 0.44 1.5E-05 31.6 4.6 56 102-159 89-144 (164)
26 1na3_A Designed protein CTPR2; 90.0 0.96 3.3E-05 27.5 5.9 49 102-158 43-91 (91)
27 3qky_A Outer membrane assembly 89.9 2 7E-05 31.9 8.7 48 105-157 151-198 (261)
28 1elr_A TPR2A-domain of HOP; HO 89.9 0.89 3.1E-05 29.1 5.9 50 102-159 4-53 (131)
29 2lni_A Stress-induced-phosphop 89.6 1 3.5E-05 29.1 6.1 51 101-159 83-133 (133)
30 1na0_A Designed protein CTPR3; 89.4 1.4 4.9E-05 27.7 6.6 46 105-158 80-125 (125)
31 4gcn_A Protein STI-1; structur 89.4 0.55 1.9E-05 31.9 4.7 54 105-159 45-98 (127)
32 3ro3_A PINS homolog, G-protein 89.3 0.58 2E-05 31.0 4.8 56 102-159 49-104 (164)
33 3sz7_A HSC70 cochaperone (SGT) 89.3 1.3 4.5E-05 30.7 6.8 31 102-132 79-109 (164)
34 3urz_A Uncharacterized protein 89.3 0.45 1.5E-05 34.9 4.5 51 100-158 52-102 (208)
35 3gw4_A Uncharacterized protein 89.2 0.52 1.8E-05 33.2 4.7 57 102-159 66-122 (203)
36 1elw_A TPR1-domain of HOP; HOP 89.2 1.1 3.8E-05 28.1 5.9 45 106-158 42-86 (118)
37 3gyz_A Chaperone protein IPGC; 89.1 1.2 4E-05 31.7 6.6 28 104-131 38-65 (151)
38 2dba_A Smooth muscle cell asso 88.8 0.74 2.5E-05 30.5 5.0 30 101-130 27-56 (148)
39 1a17_A Serine/threonine protei 88.6 3.9 0.00013 27.3 8.8 31 101-131 80-110 (166)
40 2vyi_A SGTA protein; chaperone 88.5 1.6 5.3E-05 27.8 6.3 51 101-159 79-129 (131)
41 3t5x_A PCI domain-containing p 88.3 0.57 2E-05 35.7 4.6 51 105-158 17-67 (203)
42 2fbn_A 70 kDa peptidylprolyl i 88.3 1.5 5.3E-05 31.3 6.8 56 102-159 38-103 (198)
43 3u3w_A Transcriptional activat 88.0 1.4 4.6E-05 33.9 6.6 56 101-158 195-250 (293)
44 3vtx_A MAMA; tetratricopeptide 87.9 3 0.0001 28.9 8.0 51 101-159 106-156 (184)
45 3ulq_A Response regulator aspa 87.4 2 6.8E-05 34.0 7.5 53 105-159 106-158 (383)
46 1hxi_A PEX5, peroxisome target 87.2 0.79 2.7E-05 30.8 4.4 30 102-131 17-46 (121)
47 2kc7_A BFR218_protein; tetratr 86.9 1.2 4.1E-05 27.9 4.9 45 106-158 4-49 (99)
48 3edt_B KLC 2, kinesin light ch 86.9 1.1 3.9E-05 32.7 5.4 59 100-159 125-184 (283)
49 1hh8_A P67PHOX, NCF-2, neutrop 86.9 1.6 5.3E-05 31.1 6.1 58 101-159 70-136 (213)
50 2dba_A Smooth muscle cell asso 86.6 1.7 5.8E-05 28.7 5.8 29 103-131 66-94 (148)
51 2kck_A TPR repeat; tetratricop 86.5 0.86 2.9E-05 28.4 4.0 50 102-159 6-55 (112)
52 3ulq_A Response regulator aspa 86.4 0.92 3.1E-05 36.0 5.0 58 101-159 142-199 (383)
53 4i17_A Hypothetical protein; T 86.3 2.1 7.1E-05 31.1 6.6 30 101-130 6-35 (228)
54 1elw_A TPR1-domain of HOP; HOP 86.1 2.5 8.4E-05 26.3 6.2 27 105-131 75-101 (118)
55 2fo7_A Synthetic consensus TPR 86.1 2.5 8.5E-05 26.7 6.3 50 102-159 69-118 (136)
56 2ho1_A Type 4 fimbrial biogene 85.9 7.2 0.00025 28.2 9.5 49 102-158 141-189 (252)
57 3q49_B STIP1 homology and U bo 85.8 2.5 8.4E-05 27.7 6.3 54 100-156 75-128 (137)
58 1a17_A Serine/threonine protei 85.5 2.3 8E-05 28.5 6.1 47 105-159 50-96 (166)
59 2vyi_A SGTA protein; chaperone 85.5 3.3 0.00011 26.2 6.6 50 102-159 46-95 (131)
60 3gw4_A Uncharacterized protein 85.5 1 3.4E-05 31.7 4.3 56 102-159 107-162 (203)
61 3u3w_A Transcriptional activat 85.4 10 0.00035 28.7 12.1 54 105-159 158-211 (293)
62 3edt_B KLC 2, kinesin light ch 85.2 1.4 4.7E-05 32.2 5.1 59 100-159 83-142 (283)
63 3ro2_A PINS homolog, G-protein 85.1 1.2 4E-05 33.3 4.7 54 101-158 4-57 (338)
64 2xcb_A PCRH, regulatory protei 85.0 2.4 8.2E-05 28.7 6.0 33 101-133 85-117 (142)
65 2qfc_A PLCR protein; TPR, HTH, 84.9 2.1 7.3E-05 32.7 6.3 55 103-159 197-251 (293)
66 1pc2_A Mitochondria fission pr 84.9 7.1 0.00024 28.5 8.8 54 59-131 45-100 (152)
67 2xcb_A PCRH, regulatory protei 84.9 2 6.8E-05 29.1 5.5 53 99-159 49-101 (142)
68 2fo7_A Synthetic consensus TPR 84.7 2.1 7.2E-05 27.1 5.4 26 105-130 4-29 (136)
69 3hym_B Cell division cycle pro 84.4 5.4 0.00018 29.8 8.3 58 101-159 192-251 (330)
70 3upv_A Heat shock protein STI1 84.3 3.2 0.00011 27.0 6.3 57 99-157 69-125 (126)
71 3sf4_A G-protein-signaling mod 84.3 1.9 6.5E-05 33.5 5.8 57 99-159 6-62 (406)
72 1klx_A Cysteine rich protein B 83.7 1.4 4.9E-05 30.4 4.4 30 102-131 93-126 (138)
73 3q15_A PSP28, response regulat 83.5 1.5 5.1E-05 34.8 5.0 58 101-159 140-197 (378)
74 4gco_A Protein STI-1; structur 83.4 3.9 0.00013 27.5 6.5 30 101-130 80-109 (126)
75 3rkv_A Putative peptidylprolyl 83.3 2.4 8.3E-05 29.2 5.5 29 103-131 64-92 (162)
76 1hh8_A P67PHOX, NCF-2, neutrop 83.3 3.2 0.00011 29.5 6.3 51 101-159 36-86 (213)
77 1ouv_A Conserved hypothetical 82.9 3.1 0.00011 31.0 6.4 29 102-130 6-34 (273)
78 3u4t_A TPR repeat-containing p 82.7 6.4 0.00022 28.7 8.0 54 98-159 70-123 (272)
79 1klx_A Cysteine rich protein B 82.7 1.6 5.6E-05 30.1 4.4 31 101-131 56-90 (138)
80 2q7f_A YRRB protein; TPR, prot 82.6 0.43 1.5E-05 34.6 1.3 51 101-159 56-106 (243)
81 3ro2_A PINS homolog, G-protein 82.5 1.4 4.7E-05 32.9 4.2 54 103-158 44-97 (338)
82 3nf1_A KLC 1, kinesin light ch 82.4 2.6 9E-05 31.3 5.7 58 101-159 152-210 (311)
83 3urz_A Uncharacterized protein 82.3 4.1 0.00014 29.6 6.7 51 101-159 3-69 (208)
84 3uq3_A Heat shock protein STI1 82.3 2.2 7.6E-05 30.7 5.2 76 63-159 19-94 (258)
85 2l6j_A TPR repeat-containing p 81.8 1.9 6.6E-05 27.0 4.2 55 102-158 38-92 (111)
86 3rjv_A Putative SEL1 repeat pr 81.8 1.4 4.7E-05 32.4 3.9 31 101-131 17-47 (212)
87 2e2e_A Formate-dependent nitri 81.6 4 0.00014 28.2 6.2 52 100-159 76-130 (177)
88 4eqf_A PEX5-related protein; a 81.6 2.7 9.2E-05 32.6 5.7 32 100-131 63-94 (365)
89 4i17_A Hypothetical protein; T 81.4 0.99 3.4E-05 32.8 2.9 56 102-158 76-131 (228)
90 2vq2_A PILW, putative fimbrial 81.3 6.4 0.00022 27.5 7.3 27 104-130 78-105 (225)
91 2fbn_A 70 kDa peptidylprolyl i 80.9 3.5 0.00012 29.4 5.8 48 103-158 89-136 (198)
92 3as5_A MAMA; tetratricopeptide 80.7 4.9 0.00017 27.0 6.3 51 101-159 109-159 (186)
93 3sf4_A G-protein-signaling mod 80.6 2.1 7.2E-05 33.2 4.8 54 103-158 48-101 (406)
94 2vgx_A Chaperone SYCD; alterna 80.4 4 0.00014 28.2 5.8 33 100-132 87-119 (148)
95 2vgx_A Chaperone SYCD; alterna 80.2 3.7 0.00013 28.4 5.5 53 99-159 52-104 (148)
96 3q15_A PSP28, response regulat 80.1 2.2 7.4E-05 33.8 4.8 56 102-159 101-156 (378)
97 2vq2_A PILW, putative fimbrial 79.2 4.2 0.00014 28.5 5.7 30 102-131 8-37 (225)
98 2hr2_A Hypothetical protein; a 79.2 6.1 0.00021 29.0 6.6 58 102-159 11-72 (159)
99 3uq3_A Heat shock protein STI1 78.8 5.4 0.00018 28.6 6.3 50 101-158 172-221 (258)
100 4a1s_A PINS, partner of inscut 78.7 3 0.0001 32.8 5.1 30 102-131 48-77 (411)
101 2qfc_A PLCR protein; TPR, HTH, 78.7 19 0.00065 27.2 12.5 57 102-159 155-211 (293)
102 2c2l_A CHIP, carboxy terminus 78.6 6.1 0.00021 30.3 6.9 31 101-131 3-33 (281)
103 3as5_A MAMA; tetratricopeptide 78.6 12 0.00042 24.9 8.7 51 101-159 75-125 (186)
104 4a1s_A PINS, partner of inscut 78.5 2.2 7.6E-05 33.5 4.3 55 103-159 87-141 (411)
105 1fch_A Peroxisomal targeting s 78.5 4.4 0.00015 31.1 6.0 30 101-130 63-92 (368)
106 1xnf_A Lipoprotein NLPI; TPR, 78.4 14 0.00049 26.7 8.6 28 103-130 78-105 (275)
107 4g1t_A Interferon-induced prot 78.3 4.7 0.00016 32.3 6.3 58 101-159 50-109 (472)
108 4f3v_A ESX-1 secretion system 78.1 5.6 0.00019 31.8 6.6 53 102-159 171-223 (282)
109 2ho1_A Type 4 fimbrial biogene 78.0 5.8 0.0002 28.7 6.3 44 107-158 76-119 (252)
110 3cv0_A Peroxisome targeting si 77.2 3.8 0.00013 30.6 5.2 31 100-130 19-49 (327)
111 4ga2_A E3 SUMO-protein ligase 76.9 6.6 0.00023 27.0 6.0 30 101-130 98-128 (150)
112 3gyz_A Chaperone protein IPGC; 76.5 8.5 0.00029 27.1 6.6 49 102-158 70-118 (151)
113 2q7f_A YRRB protein; TPR, prot 76.0 6.3 0.00022 28.1 5.9 50 102-159 159-208 (243)
114 1xnf_A Lipoprotein NLPI; TPR, 75.8 7.9 0.00027 28.1 6.5 77 59-158 15-91 (275)
115 3fp2_A TPR repeat-containing p 75.6 3.9 0.00013 33.3 5.1 30 102-131 25-54 (537)
116 2gw1_A Mitochondrial precursor 75.5 5.5 0.00019 31.9 6.0 30 102-131 6-35 (514)
117 2hr2_A Hypothetical protein; a 75.4 8.5 0.00029 28.1 6.4 57 102-159 57-117 (159)
118 4eqf_A PEX5-related protein; a 75.3 18 0.00062 27.7 8.8 50 102-159 247-296 (365)
119 1ouv_A Conserved hypothetical 75.0 7.7 0.00026 28.7 6.3 29 102-130 182-214 (273)
120 1qqe_A Vesicular transport pro 74.1 5.1 0.00018 30.7 5.3 56 102-159 117-173 (292)
121 3cv0_A Peroxisome targeting si 74.1 11 0.00038 28.0 7.1 58 101-159 239-301 (327)
122 2e2e_A Formate-dependent nitri 74.0 9.7 0.00033 26.1 6.3 50 99-153 112-161 (177)
123 4abn_A Tetratricopeptide repea 72.7 6.8 0.00023 32.6 6.0 53 99-159 99-152 (474)
124 3hym_B Cell division cycle pro 71.9 7.8 0.00027 28.9 5.7 51 100-158 234-284 (330)
125 2y4t_A DNAJ homolog subfamily 71.7 7.7 0.00026 30.7 5.9 29 102-130 26-54 (450)
126 1fch_A Peroxisomal targeting s 71.5 9.9 0.00034 29.0 6.4 58 101-159 284-345 (368)
127 3t5v_B Nuclear mRNA export pro 71.3 3.9 0.00013 35.0 4.2 54 104-158 222-279 (455)
128 1qqe_A Vesicular transport pro 71.1 8.4 0.00029 29.4 5.8 56 103-159 158-214 (292)
129 3bee_A Putative YFRE protein; 71.0 18 0.00061 23.3 6.7 45 105-154 46-90 (93)
130 1hxi_A PEX5, peroxisome target 70.1 7.5 0.00026 25.7 4.8 30 102-131 51-80 (121)
131 3ma5_A Tetratricopeptide repea 69.7 5.4 0.00018 25.4 3.8 33 102-134 41-73 (100)
132 2pl2_A Hypothetical conserved 69.0 9.2 0.00032 27.8 5.4 48 100-155 37-84 (217)
133 2xpi_A Anaphase-promoting comp 68.7 13 0.00044 30.7 6.8 58 101-159 474-531 (597)
134 1p5q_A FKBP52, FK506-binding p 68.2 13 0.00043 29.3 6.5 58 102-159 147-211 (336)
135 1p5q_A FKBP52, FK506-binding p 67.9 9.5 0.00033 30.1 5.7 29 103-131 197-225 (336)
136 2r5s_A Uncharacterized protein 67.8 15 0.00051 25.4 6.2 52 101-158 107-158 (176)
137 2c2l_A CHIP, carboxy terminus 67.1 32 0.0011 26.0 8.5 33 101-133 71-103 (281)
138 1ihg_A Cyclophilin 40; ppiase 67.1 8.9 0.00031 31.0 5.4 49 102-158 273-321 (370)
139 3rjv_A Putative SEL1 repeat pr 66.8 6.6 0.00023 28.6 4.2 30 102-131 125-158 (212)
140 1kt0_A FKBP51, 51 kDa FK506-bi 66.6 12 0.0004 31.1 6.1 57 102-159 268-332 (457)
141 2ifu_A Gamma-SNAP; membrane fu 66.1 8 0.00027 29.8 4.8 53 104-159 118-170 (307)
142 2kc7_A BFR218_protein; tetratr 65.8 7.8 0.00027 23.9 3.9 31 102-132 34-65 (99)
143 3u4t_A TPR repeat-containing p 65.7 15 0.00051 26.6 6.1 51 104-159 39-89 (272)
144 1hz4_A MALT regulatory protein 65.7 14 0.00049 28.6 6.2 54 105-159 96-150 (373)
145 2vsy_A XCC0866; transferase, g 65.0 26 0.00089 29.3 8.1 49 101-157 90-138 (568)
146 1w3b_A UDP-N-acetylglucosamine 64.5 34 0.0012 26.4 8.3 30 101-130 66-95 (388)
147 2pl2_A Hypothetical conserved 64.2 37 0.0013 24.4 11.5 46 105-158 154-199 (217)
148 2ifu_A Gamma-SNAP; membrane fu 64.0 9.1 0.00031 29.5 4.7 95 60-158 107-209 (307)
149 3bee_A Putative YFRE protein; 63.6 26 0.0009 22.5 6.5 48 101-156 5-55 (93)
150 2if4_A ATFKBP42; FKBP-like, al 63.3 6.9 0.00024 31.0 4.0 58 102-159 179-245 (338)
151 2y4t_A DNAJ homolog subfamily 63.3 29 0.00099 27.2 7.7 47 104-158 297-343 (450)
152 1ihg_A Cyclophilin 40; ppiase 63.2 18 0.00063 29.1 6.6 57 102-159 223-288 (370)
153 1wao_1 Serine/threonine protei 62.7 39 0.0013 28.1 8.8 31 101-131 73-103 (477)
154 2if4_A ATFKBP42; FKBP-like, al 61.7 15 0.00051 29.0 5.7 47 105-159 233-279 (338)
155 2r5s_A Uncharacterized protein 60.9 8.9 0.0003 26.7 3.8 48 103-158 7-54 (176)
156 1hz4_A MALT regulatory protein 60.2 9.8 0.00034 29.5 4.3 54 104-159 55-108 (373)
157 1kt0_A FKBP51, 51 kDa FK506-bi 57.1 18 0.00063 29.8 5.7 48 103-158 318-365 (457)
158 3qww_A SET and MYND domain-con 56.9 14 0.00049 30.9 5.0 57 102-159 340-397 (433)
159 3k9i_A BH0479 protein; putativ 56.3 10 0.00034 24.5 3.2 32 102-133 61-92 (117)
160 3ieg_A DNAJ homolog subfamily 55.7 60 0.002 24.0 12.5 30 102-131 306-335 (359)
161 2kat_A Uncharacterized protein 54.8 15 0.00052 23.2 3.9 33 102-134 53-85 (115)
162 3qww_A SET and MYND domain-con 53.9 22 0.00077 29.7 5.7 55 104-159 300-355 (433)
163 1w3b_A UDP-N-acetylglucosamine 52.7 35 0.0012 26.3 6.4 50 102-159 339-388 (388)
164 2lnz_A Ubiquitin-like protein 52.5 9.3 0.00032 23.8 2.3 16 66-81 46-62 (64)
165 2xm6_A Protein corresponding t 50.5 36 0.0012 27.7 6.4 30 101-130 362-395 (490)
166 3n71_A Histone lysine methyltr 49.4 22 0.00076 30.3 5.0 58 101-159 350-408 (490)
167 2gw1_A Mitochondrial precursor 49.2 37 0.0013 26.9 6.2 49 102-158 39-87 (514)
168 2vsy_A XCC0866; transferase, g 49.0 28 0.00097 29.1 5.6 53 99-159 54-106 (568)
169 3ffl_A Anaphase-promoting comp 49.0 56 0.0019 24.1 6.6 54 105-159 66-137 (167)
170 4gyw_A UDP-N-acetylglucosamine 48.1 32 0.0011 30.8 6.0 43 108-158 49-91 (723)
171 4abn_A Tetratricopeptide repea 47.6 23 0.00078 29.3 4.8 33 100-132 256-288 (474)
172 2xpi_A Anaphase-promoting comp 47.5 34 0.0012 28.0 5.8 50 102-159 516-565 (597)
173 2xm6_A Protein corresponding t 46.5 21 0.00072 29.2 4.4 26 105-130 78-107 (490)
174 3ieg_A DNAJ homolog subfamily 46.4 86 0.0029 23.1 11.7 51 101-159 153-203 (359)
175 3fp2_A TPR repeat-containing p 45.8 41 0.0014 27.0 6.0 51 101-159 58-108 (537)
176 3qou_A Protein YBBN; thioredox 45.7 40 0.0014 25.6 5.6 49 102-158 117-165 (287)
177 3qwp_A SET and MYND domain-con 45.3 24 0.00082 29.4 4.5 58 101-159 328-386 (429)
178 2pzi_A Probable serine/threoni 44.6 28 0.00097 30.3 5.1 31 101-131 432-462 (681)
179 4b4t_Q 26S proteasome regulato 44.0 26 0.00088 27.5 4.4 33 102-134 175-207 (434)
180 4b4t_S RPN3, 26S proteasome re 43.7 25 0.00086 30.7 4.5 51 104-155 272-322 (523)
181 4g1t_A Interferon-induced prot 42.5 44 0.0015 26.5 5.6 50 106-156 98-148 (472)
182 4b4t_Q 26S proteasome regulato 42.2 49 0.0017 25.8 5.8 59 99-159 132-190 (434)
183 3n71_A Histone lysine methyltr 40.7 53 0.0018 27.9 6.1 54 105-159 312-366 (490)
184 2h6f_A Protein farnesyltransfe 40.3 46 0.0016 27.0 5.5 30 102-131 131-161 (382)
185 3qwp_A SET and MYND domain-con 39.1 41 0.0014 27.9 5.0 59 98-157 367-426 (429)
186 3mkr_A Coatomer subunit epsilo 37.8 79 0.0027 24.0 6.3 50 101-158 199-248 (291)
187 1ya0_A SMG-7 transcript varian 37.6 61 0.0021 27.8 6.0 64 72-135 106-185 (497)
188 4gyw_A UDP-N-acetylglucosamine 36.5 67 0.0023 28.6 6.3 46 105-158 114-159 (723)
189 2pzi_A Probable serine/threoni 36.3 44 0.0015 29.1 5.0 31 101-131 466-496 (681)
190 3qou_A Protein YBBN; thioredox 35.6 83 0.0028 23.7 6.0 52 101-158 218-269 (287)
191 2v5f_A Prolyl 4-hydroxylase su 34.7 42 0.0014 21.4 3.6 31 101-131 44-75 (104)
192 3mv2_B Coatomer subunit epsilo 34.5 1.1E+02 0.0038 24.5 6.8 51 102-158 100-150 (310)
193 2ixn_A Serine/threonine-protei 32.5 12 0.00041 30.5 0.7 24 62-85 155-186 (310)
194 2ixm_A Serine/threonine-protei 32.3 12 0.00043 30.4 0.7 27 59-85 152-186 (303)
195 2ixo_A Serine/threonine-protei 30.6 14 0.00047 30.4 0.7 16 70-85 182-197 (323)
196 3e4b_A ALGK; tetratricopeptide 30.2 52 0.0018 26.9 4.2 30 101-130 317-350 (452)
197 3r9m_A BRO1 domain-containing 30.0 53 0.0018 26.9 4.2 34 101-134 252-285 (376)
198 1y8m_A FIS1; mitochondria, unk 29.5 1.6E+02 0.0053 21.2 8.9 33 99-131 73-106 (144)
199 3o48_A Mitochondria fission 1 28.2 46 0.0016 23.7 3.1 30 102-131 77-107 (134)
200 3rau_A Tyrosine-protein phosph 27.9 62 0.0021 26.5 4.2 35 100-134 250-284 (363)
201 3c3r_A Programmed cell death 6 27.5 63 0.0021 26.5 4.2 34 101-134 274-307 (380)
202 3ffl_A Anaphase-promoting comp 27.1 93 0.0032 22.9 4.7 53 106-159 24-78 (167)
203 3zwl_E Eukaryotic translation 27.1 56 0.0019 19.3 2.8 19 24-42 17-35 (50)
204 3e4b_A ALGK; tetratricopeptide 27.1 54 0.0019 26.8 3.8 30 101-130 247-279 (452)
205 3mkr_A Coatomer subunit epsilo 27.1 69 0.0024 24.4 4.2 26 102-127 101-126 (291)
206 1zb1_A BRO1 protein; AIP1, BRO 27.0 68 0.0023 26.3 4.4 35 100-134 255-289 (392)
207 1wao_1 Serine/threonine protei 26.6 55 0.0019 27.2 3.8 73 60-159 17-89 (477)
208 4dnd_A Syntaxin-10, SYN10; str 25.5 1.7E+02 0.0059 20.3 6.2 61 23-88 42-109 (130)
209 2h6f_A Protein farnesyltransfe 24.9 1.3E+02 0.0044 24.2 5.7 43 106-156 204-246 (382)
210 1nzn_A CGI-135 protein, fissio 24.7 77 0.0026 22.1 3.7 31 101-131 72-103 (126)
211 4b4t_P 26S proteasome regulato 24.0 2.7E+02 0.0092 23.0 7.6 58 63-134 151-209 (445)
212 2cwy_A Hypothetical protein TT 20.3 62 0.0021 21.3 2.3 27 106-132 5-31 (94)
213 3vej_A Ubiquitin-like protein 20.2 65 0.0022 18.3 2.0 21 12-32 17-38 (41)
No 1
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.51 E-value=4.5e-14 Score=97.97 Aligned_cols=60 Identities=45% Similarity=0.833 Sum_probs=55.3
Q ss_pred CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 99 QLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+||+.|||+||+++|+.++|.+|+.|+++|+++.+.+...+.. ..+|+.+||.|.+++|+
T Consensus 2 ~Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~ 61 (104)
T 2v5f_A 2 FLTAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGD 61 (104)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccC
Confidence 5999999999999999999999999999999998776555678 99999999999999985
No 2
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=94.97 E-value=0.059 Score=33.35 Aligned_cols=29 Identities=24% Similarity=0.458 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
+.-|+.+|..++..++|..|..|++.|+.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 37 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALE 37 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 33445555555555555555555555543
No 3
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=94.50 E-value=0.4 Score=31.43 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRH 132 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~ 132 (159)
+.-.+.+|..++..|++..|..+++.++...
T Consensus 76 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 76 AGGLLKLGLSQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 3445566666666666666666666665543
No 4
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=94.36 E-value=0.093 Score=33.61 Aligned_cols=28 Identities=7% Similarity=0.094 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
.-++.+|..++..++|..|..+++.|+.
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3344455555555555555555555443
No 5
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=93.42 E-value=0.16 Score=35.65 Aligned_cols=49 Identities=6% Similarity=0.182 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.-+|.||+.+++.++|..|..+++.|++.-. + ..+++..++.+++++|
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p-------~-~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINVQE-------R-DPKAHRFLGLLYELEE 79 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------C-CHHHHHHHHHHHHHcC
Confidence 34568999999999999999999999987522 2 3455556666666655
No 6
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=93.32 E-value=0.15 Score=33.88 Aligned_cols=49 Identities=8% Similarity=-0.063 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.=.+.+|..++..++|..|..+++.|++.- ++ ...++-.+|.+++.+|
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~-~~~~~~~lg~~~~~~~ 86 (126)
T 3upv_A 38 ARGYSNRAAALAKLMSFPEAIADCNKAIEKD-------PN-FVRAYIRKATAQIAVK 86 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-------CC-cHHHHHHHHHHHHHHh
Confidence 3334445555555555555555555554321 11 2344555555555554
No 7
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=93.19 E-value=0.22 Score=32.34 Aligned_cols=50 Identities=8% Similarity=-0.045 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
++.=.+.+|..++..++|..|..+++.|++.-.. ...++..+|.++.+.|
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--------~~~a~~~lg~~~~~~g 55 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD--------YVGTYYHLGKLYERLD 55 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CTHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHcC
Confidence 4555677888888888888888888888764221 2245556666666655
No 8
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=92.92 E-value=0.32 Score=33.09 Aligned_cols=47 Identities=17% Similarity=0.258 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
...+|..+|+.|+|..|..++..|+..-. + ...++-.+|.+++++|+
T Consensus 11 ~~~lG~~~~~~~~~~~A~~~y~~Al~~~p-------~-~~~~~~nlg~~~~~~~~ 57 (127)
T 4gcn_A 11 EKDLGNAAYKQKDFEKAHVHYDKAIELDP-------S-NITFYNNKAAVYFEEKK 57 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------C-CHHHHHhHHHHHHHhhh
Confidence 34689999999999999999999987521 2 35667777887777764
No 9
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=92.71 E-value=1.1 Score=27.88 Aligned_cols=52 Identities=8% Similarity=-0.008 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhc-CC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQ-DP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~-g~ 159 (159)
+.=++.+|..++..++|..|..+++.+++.... .. ...++..+|.+.++. |+
T Consensus 40 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-----~~-~~~~~~~l~~~~~~~~~~ 92 (112)
T 2kck_A 40 SKYWLMKGKALYNLERYEEAVDCYNYVINVIED-----EY-NKDVWAAKADALRYIEGK 92 (112)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC-----TT-CHHHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-----cc-hHHHHHHHHHHHHHHhCC
Confidence 445678888888888888888888888865322 11 346667777777776 53
No 10
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=92.44 E-value=0.36 Score=35.77 Aligned_cols=53 Identities=8% Similarity=0.128 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
++...|.+|..++..|+|..|...++.++...... .. ..+++-.+|.+.++.|
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~----~~-~~~a~~~lg~~~~~~~ 55 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFG----PY-SQQVQLDLIYAYYKNA 55 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS----TT-HHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----hH-HHHHHHHHHHHHHhcC
Confidence 44555555555555555555555555555432211 12 2344444555555444
No 11
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=92.39 E-value=0.24 Score=32.06 Aligned_cols=57 Identities=9% Similarity=0.055 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=++.+|..++..++|..|..+++.++............ ...++-.+|.++++.|+
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~ 94 (131)
T 1elr_A 38 MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQ-IAKAYARIGNSYFKEEK 94 (131)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHH-HHHHHHHHHHHHHHhcc
Confidence 5667899999999999999999999999876543211111 26777788888887764
No 12
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=92.26 E-value=0.46 Score=31.47 Aligned_cols=30 Identities=20% Similarity=0.328 Sum_probs=15.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
++...+.+|..++..++|..|...+..|+.
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 37 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAIT 37 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 445555555555555555555555555544
No 13
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=92.15 E-value=0.32 Score=34.25 Aligned_cols=50 Identities=16% Similarity=0.113 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=.+.||..++..|+|..|..+++.|++.- ++ ..+++..+|.+++++|+
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~-------p~-~~~~~~~la~~~~~~~~ 54 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKAD-------PN-NVETLLKLGKTYMDIGL 54 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CC-CHHHHHHHHHHHHHCCC
Confidence 4556889999999999999999999998752 12 45677777777777663
No 14
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=92.15 E-value=0.39 Score=32.70 Aligned_cols=48 Identities=15% Similarity=0.070 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
..-...|..+|+.|+|..|...++.|++.-. . ...++-.+|.+++++|
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~~~~~~~~~~~ 61 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDP-------E-NAILYSNRAACLTKLM 61 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------C-CHHHHHHHhhHHHhhc
Confidence 3445778888888888888888888876421 2 3455555666666555
No 15
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=92.13 E-value=0.31 Score=32.20 Aligned_cols=50 Identities=10% Similarity=0.133 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=.+.+|..++..++|..|..+++.|++... . ..+++-.++.++++.|+
T Consensus 27 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-------~-~~~~~~~l~~~~~~~g~ 76 (117)
T 3k9i_A 27 AECYLGLGSTFRTLGEYRKAEAVLANGVKQFP-------N-HQALRVFYAMVLYNLGR 76 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------C-chHHHHHHHHHHHHcCC
Confidence 44467899999999999999999999987632 2 34667778888777764
No 16
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=92.12 E-value=0.48 Score=30.78 Aligned_cols=49 Identities=10% Similarity=-0.179 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.=.+.+|..++..++|..|..+++.|++.. .. ...++..+|.++++.|
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-------~~-~~~~~~~la~~~~~~~ 98 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLE-------PT-FIKGYTRKAAALEAMK 98 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-------CC-chHHHHHHHHHHHHHh
Confidence 4444555555555555555555555555431 11 2345555666665554
No 17
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=91.36 E-value=0.42 Score=35.81 Aligned_cols=74 Identities=14% Similarity=0.020 Sum_probs=52.9
Q ss_pred HhhccccCCcccCCCCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCC-CCCCCHHHHHHHHHHhHhhcCC
Q psy8176 85 SVARGELNGVQYTTQLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERN-GTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 85 dla~G~l~g~~~~~~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~-~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.+.........+.+-.+.-.+.+|..++..++|..|..+++.+++....... .... ...++..+|.+++..|+
T Consensus 10 ~~~~~~~q~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~ 84 (311)
T 3nf1_A 10 GRENLYFQGGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPD-VATMLNILALVYRDQNK 84 (311)
T ss_dssp GGGGGSCSSSCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHH-HHHHHHHHHHHHHHTTC
T ss_pred ccccccccCCCCcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHHHCCC
Confidence 33444444433445566777899999999999999999999999987765321 1223 56778888888887764
No 18
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=91.18 E-value=0.55 Score=32.71 Aligned_cols=30 Identities=10% Similarity=0.107 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+...+.+|..++..++|..|...++.|++.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 40 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSI 40 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 445555666666666666666666655543
No 19
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=91.02 E-value=1.7 Score=31.97 Aligned_cols=50 Identities=4% Similarity=-0.036 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.+|..+++.++|..|...++.+++.+... .. ..+++..++.+..++|+
T Consensus 150 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~----~~-~~~a~~~l~~~~~~~g~ 199 (225)
T 2yhc_A 150 EYSVAEYYTERGAWVAVVNRVEGMLRDYPDT----QA-TRDALPLMENAYRQMQM 199 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS----HH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC----Cc-cHHHHHHHHHHHHHcCC
Confidence 3789999999999999999999999876542 12 45888899999988875
No 20
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=90.99 E-value=0.53 Score=29.89 Aligned_cols=52 Identities=19% Similarity=0.255 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
-++.-++.+|..++..++|..|..+++.+++.. .. ...++..+|.+.++.|+
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-------~~-~~~~~~~la~~~~~~~~ 92 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-------PN-NAEAWYNLGNAYYKQGD 92 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-------Cc-cHHHHHHHHHHHHHhcC
Confidence 466667778888888888888888887777542 12 34556677777776653
No 21
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=90.80 E-value=0.27 Score=34.26 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccC---CC--------CCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMER---NG--------TSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~---~~--------~~~~~~~il~~la~s~~~~g~ 159 (159)
+..+...|..++..++|..|...+..|+..+.... .+ ... ...++-.+|.+++++|+
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~ 78 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGD 78 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCc
Confidence 66788999999999999999999999998854311 11 112 45677788888888774
No 22
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=90.77 E-value=0.73 Score=34.51 Aligned_cols=27 Identities=19% Similarity=0.261 Sum_probs=13.2
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
.+.+|..++..++|..|..+++.+++.
T Consensus 55 ~~~lg~~~~~~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 55 QFYLARAYYQNKEYLLAASEYERFIQI 81 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 344455555555555555555444443
No 23
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=90.69 E-value=0.73 Score=30.00 Aligned_cols=28 Identities=21% Similarity=0.233 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
.=.+.+|..++..++|..|..+++.|+.
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 47 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALD 47 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3344555555555555555555555544
No 24
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=90.40 E-value=0.85 Score=29.76 Aligned_cols=48 Identities=19% Similarity=0.181 Sum_probs=31.6
Q ss_pred HHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 107 ELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 107 ~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+|..++..++|..|..+++.+++..... .. ..+++-.+|.+++++|+
T Consensus 44 ~lg~~~~~~~~~~~A~~~~~~~~~~~p~~----~~-~~~~~~~la~~~~~~g~ 91 (129)
T 2xev_A 44 WLGESYYATRNFQLAEAQFRDLVSRYPTH----DK-AAGGLLKLGLSQYGEGK 91 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTS----TT-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHCCCC----cc-cHHHHHHHHHHHHHcCC
Confidence 36777777777777777777777643221 22 45677777777777764
No 25
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=90.02 E-value=0.44 Score=31.65 Aligned_cols=56 Identities=14% Similarity=0.073 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=++.+|..++..++|..|..+++.|+........ ... ...++..+|.+.+..|+
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~-~~~~~~~la~~~~~~g~ 144 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKD-RIG-EGRACWSLGNAYTALGN 144 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-HHH-HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccc-hHh-HHHHHHHHHHHHHHccC
Confidence 455788999999999999999999999988765321 122 45667788888877764
No 26
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=90.01 E-value=0.96 Score=27.48 Aligned_cols=49 Identities=22% Similarity=0.289 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.-.+.+|..++..++|..|..+++.|+.... . ...++..++.+..+.|
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p-------~-~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-------N-NAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-------C-CHHHHHHHHHHHHhcC
Confidence 45678999999999999999999999987521 2 3567777887776654
No 27
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=89.87 E-value=2 Score=31.94 Aligned_cols=48 Identities=8% Similarity=-0.101 Sum_probs=39.0
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhc
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQ 157 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~ 157 (159)
.+.+|..++..|+|..|...++.+++..... .. ..+++-.++.+.+++
T Consensus 151 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~----~~-~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 151 QYEAARLYERRELYEAAAVTYEAVFDAYPDT----PW-ADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS----TT-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHCCCC----ch-HHHHHHHHHHHHHHh
Confidence 4899999999999999999999999865442 23 567777888877755
No 28
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=89.85 E-value=0.89 Score=29.13 Aligned_cols=50 Identities=22% Similarity=0.206 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-++.+|..++..++|..|...++.++.... . ...++..+|.+++..|+
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-------~-~~~~~~~la~~~~~~~~ 53 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDP-------T-NMTYITNQAAVYFEKGD 53 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-------c-cHHHHHHHHHHHHHhcc
Confidence 45678999999999999999999999987532 2 34566667777766653
No 29
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=89.61 E-value=1 Score=29.10 Aligned_cols=51 Identities=10% Similarity=-0.096 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.=++.+|..++..++|..|..+++.++..... ..++...++.+.+++|+
T Consensus 83 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~--------~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 83 FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS--------CKEAADGYQRCMMAQYN 133 (133)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG--------GTHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC--------chHHHHHHHHHHHHhcC
Confidence 3566789999999999999999999999875322 34677788888888775
No 30
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=89.37 E-value=1.4 Score=27.73 Aligned_cols=46 Identities=22% Similarity=0.291 Sum_probs=36.1
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
++.+|..++..+++..|..+++.+++... . ...++..++.+..+.|
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~-------~-~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 80 WYNLGNAYYKQGDYDEAIEYYQKALELDP-------N-NAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------C-cHHHHHHHHHHHHhcc
Confidence 46889999999999999999999986521 2 4567778888776654
No 31
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=89.35 E-value=0.55 Score=31.85 Aligned_cols=54 Identities=7% Similarity=-0.005 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
-+.+|..++..++|..|...++.|+............ ...++..++.+...+|+
T Consensus 45 ~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-~a~~~~~lg~~~~~~~~ 98 (127)
T 4gcn_A 45 YNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKL-IAKAMSRAGNAFQKQND 98 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHH-HHHHHHHHHHHHHHcCC
Confidence 4569999999999999999999999865543221122 34566667777666653
No 32
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=89.33 E-value=0.58 Score=31.01 Aligned_cols=56 Identities=9% Similarity=0.011 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=++.+|..++..++|..|..+++.|+........ ... ...++-.+|.+.+..|+
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~-~~~-~~~~~~~l~~~~~~~~~ 104 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD-RAV-EAQSCYSLGNTYTLLQD 104 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-HHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC-cHH-HHHHHHHHHHHHHHHhh
Confidence 455778999999999999999999999988766321 122 45667777887777664
No 33
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=89.28 E-value=1.3 Score=30.66 Aligned_cols=31 Identities=10% Similarity=0.180 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRH 132 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~ 132 (159)
+.=.+.+|..++..++|..|..+++.+++..
T Consensus 79 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 79 SKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 4555666777777777777777776666543
No 34
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=89.28 E-value=0.45 Score=34.91 Aligned_cols=51 Identities=16% Similarity=0.185 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.+.-|+.+|..++..|+|..|..+++.|++.-. . ..+++-.+|.++++.|
T Consensus 52 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~~lg~~~~~~g 102 (208)
T 3urz_A 52 ISSKLATELALAYKKNRNYDKAYLFYKELLQKAP-------N-NVDCLEACAEMQVCRG 102 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-------C-CHHHHHHHHHHHHHcC
Confidence 4455566677777777777777777777775421 1 2344445555555544
No 35
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=89.25 E-value=0.52 Score=33.23 Aligned_cols=57 Identities=5% Similarity=-0.149 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=++.+|..++..++|..|...++.|+......+..... ...++-.++.+.+..|+
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~lg~~~~~~g~ 122 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLA-ASANAYEVATVALHFGD 122 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH-HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHH-HHHHHHHHHHHHHHhCC
Confidence 5557789999999999999999999999987753311113 45667777777777664
No 36
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=89.22 E-value=1.1 Score=28.05 Aligned_cols=45 Identities=4% Similarity=-0.213 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 106 FELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 106 ~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.+|..++..++|..|..+++.++... +. ...++..+|.+..+.|
T Consensus 42 ~~~a~~~~~~~~~~~A~~~~~~~~~~~-------~~-~~~~~~~~a~~~~~~~ 86 (118)
T 1elw_A 42 SNRSAAYAKKGDYQKAYEDGCKTVDLK-------PD-WGKGYSRKAAALEFLN 86 (118)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhC-------cc-cHHHHHHHHHHHHHHh
Confidence 344555555555555555555555431 11 2345555666655554
No 37
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=89.14 E-value=1.2 Score=31.71 Aligned_cols=28 Identities=11% Similarity=0.132 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 104 DCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 104 DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
-.+.+|..+++.|+|..|...++.|+..
T Consensus 38 ~~~~lg~~~~~~g~~~eA~~~~~~al~~ 65 (151)
T 3gyz_A 38 DIYSYAYDFYNKGRIEEAEVFFRFLCIY 65 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4556666666666666666666666543
No 38
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.82 E-value=0.74 Score=30.50 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=16.6
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
++...+.+|..++..++|..|..+++.+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 56 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALG 56 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 445555555555555555555555555553
No 39
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=88.63 E-value=3.9 Score=27.34 Aligned_cols=31 Identities=6% Similarity=-0.025 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
++.=++.+|..++..++|..|..+++.++..
T Consensus 80 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 80 YIKGYYRRAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 4667888898889999999999999888865
No 40
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=88.50 E-value=1.6 Score=27.82 Aligned_cols=51 Identities=8% Similarity=0.010 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-.+.+|..++..+++..|..+++.++.... . ...+...++.+..++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p-------~-~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 79 YSKAYGRMGLALSSLNKHVEAVAYYKKALELDP-------D-NETYKSNLKIAELKLRE 129 (131)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-------T-CHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc-------c-chHHHHHHHHHHHHHhc
Confidence 356789999999999999999999999987522 2 34667788888777764
No 41
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=88.30 E-value=0.57 Score=35.74 Aligned_cols=51 Identities=22% Similarity=0.302 Sum_probs=40.7
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+|.+|+.+.-+++|..|..+|.+|++...... ... +..||.||.-+..-+|
T Consensus 17 ~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~--~~~-k~~IL~yLIp~~Ll~G 67 (203)
T 3t5x_A 17 KYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS--QKN-KRMILIYLLPVKMLLG 67 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC--HHH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH--HHH-HHHHHHHHHHHHHHcC
Confidence 68999999999999999999999998865421 234 7788999876655554
No 42
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=88.28 E-value=1.5 Score=31.31 Aligned_cols=56 Identities=16% Similarity=0.021 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCH----------HHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPK----------WEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~----------~~il~~la~s~~~~g~ 159 (159)
+..++.+|..++..++|..|...+..|+........ ... . ..++..+|.+++++|+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~la~~~~~~~~ 103 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEE-WDD-QILLDKKKNIEISCNLNLATCYNKNKD 103 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTT-CCC-HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccc-cch-hhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445789999999999999999999999987654221 111 1 2677778888887764
No 43
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=87.95 E-value=1.4 Score=33.87 Aligned_cols=56 Identities=4% Similarity=-0.065 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
.+.=++.+|..+++.++|..|..+++.|++...... .... ...++-.++.+.+++|
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~-~~~~-~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN-SMAL-IGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-BCTT-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC-cHHH-HHHHHHHHHHHHHHhC
Confidence 344568999999999999999999999998776532 2334 6788888999888887
No 44
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=87.89 E-value=3 Score=28.95 Aligned_cols=51 Identities=6% Similarity=-0.053 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-++.+|..++..|+|..|...++.+++.- +. ..+++..+|.++.++|+
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~-------p~-~~~~~~~lg~~~~~~g~ 156 (184)
T 3vtx_A 106 YADAYYKLGLVYDSMGEHDKAIEAYEKTISIK-------PG-FIRAYQSIGLAYEGKGL 156 (184)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHhCCchhHHHHHHHHHHhc-------ch-hhhHHHHHHHHHHHCCC
Confidence 45667889999999999999999999988642 12 45677788888887774
No 45
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=87.35 E-value=2 Score=34.01 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=41.0
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.|..|..++..++|..|..+++.|+......+ .... ...++-.+|.+.+.+|+
T Consensus 106 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~-~a~~~~~lg~~~~~~~~ 158 (383)
T 3ulq_A 106 NFFRGMYELDQREYLSAIKFFKKAESKLIFVK-DRIE-KAEFFFKMSESYYYMKQ 158 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCC-CHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCC-CHHH-HHHHHHHHHHHHHHcCC
Confidence 44599999999999999999999998776532 1223 56778888888887774
No 46
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=87.24 E-value=0.79 Score=30.81 Aligned_cols=30 Identities=13% Similarity=0.144 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
..+.|.+|..++..|++..|...++.|+..
T Consensus 17 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 46 (121)
T 1hxi_A 17 HENPMEEGLSMLKLANLAEAALAFEAVCQK 46 (121)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345677777777777777777777777653
No 47
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=86.93 E-value=1.2 Score=27.87 Aligned_cols=45 Identities=9% Similarity=-0.013 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHH-HHHHHHHhHhhcC
Q psy8176 106 FELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWE-ILEYLAYSKFMQD 158 (159)
Q Consensus 106 ~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~-il~~la~s~~~~g 158 (159)
+..|..++..++|..|...++.+++... . ... ++-.+|.+++.+|
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p-------~-~~~~~~~~lg~~~~~~~ 49 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEP-------V-GKDEAYYLMGNAYRKLG 49 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCS-------S-THHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCC-------C-cHHHHHHHHHHHHHHcC
Confidence 4566666666777777777666665311 1 223 5555555555554
No 48
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=86.93 E-value=1.1 Score=32.69 Aligned_cols=59 Identities=14% Similarity=-0.027 Sum_probs=45.5
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCC-CCCCHHHHHHHHHHhHhhcCC
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNG-TSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~-~~~~~~~il~~la~s~~~~g~ 159 (159)
..+.-++.+|..++..++|..|..+++.|++........ ... ...++..+|.+.+.+|+
T Consensus 125 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~ 184 (283)
T 3edt_B 125 DVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPN-VAKTKNNLASCYLKQGK 184 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHHHHcCC
Confidence 346667899999999999999999999999886553221 223 56778888888888774
No 49
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=86.93 E-value=1.6 Score=31.13 Aligned_cols=58 Identities=19% Similarity=0.121 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCC---------CCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERN---------GTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~---------~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-++.+|..++..++|..|..+++.|++....... .... ...++-.+|.+++++|+
T Consensus 70 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 136 (213)
T 1hh8_A 70 LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLF-ACEVLYNIAFMYAKKEE 136 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEE-HHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCcc-chHHHHHHHHHHHHccC
Confidence 4667889999999999999999999999986544220 1223 56788888888888774
No 50
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.63 E-value=1.7 Score=28.66 Aligned_cols=29 Identities=7% Similarity=0.006 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
.-++.+|..++..++|..|..+++.++..
T Consensus 66 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 66 VLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 34455666666666666666666666543
No 51
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=86.46 E-value=0.86 Score=28.40 Aligned_cols=50 Identities=6% Similarity=0.109 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-++.+|..++..++|..|...++.+++... . ...++-.+|.++++.|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~-------~-~~~~~~~~a~~~~~~~~ 55 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDP-------E-ESKYWLMKGKALYNLER 55 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCC-------C-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCc-------C-CHHHHHHHHHHHHHccC
Confidence 44567899999999999999999999987532 2 34566677777776663
No 52
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=86.38 E-value=0.92 Score=35.99 Aligned_cols=58 Identities=10% Similarity=0.051 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.=++.+|..++..++|..|..++..|++.+......... ...++..+|.+...+|+
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~lg~~~~~~g~ 199 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIR-LLQCHSLFATNFLDLKQ 199 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHH-HHHHHHHHHHHHHHhcC
Confidence 45668899999999999999999999999988764321223 45667777777766663
No 53
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=86.34 E-value=2.1 Score=31.05 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=15.8
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
++...+.+|..++..++|..|...+..|++
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 35 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLK 35 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 344455555555555555555555555544
No 54
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=86.13 E-value=2.5 Score=26.33 Aligned_cols=27 Identities=15% Similarity=-0.047 Sum_probs=24.4
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
++.+|..++..+++..|..+++.+++.
T Consensus 75 ~~~~a~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 75 YSRKAAALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 578899999999999999999999864
No 55
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=86.11 E-value=2.5 Score=26.73 Aligned_cols=50 Identities=20% Similarity=0.265 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=++.+|..++..+++..|..+++.++.... . ...++..+|.+.++.|+
T Consensus 69 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-------~-~~~~~~~la~~~~~~~~ 118 (136)
T 2fo7_A 69 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-------R-SAEAWYNLGNAYYKQGD 118 (136)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------C-ChHHHHHHHHHHHHHcc
Confidence 44567899999999999999999999986522 1 24555567777666653
No 56
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.95 E-value=7.2 Score=28.15 Aligned_cols=49 Identities=10% Similarity=0.054 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.-.+.+|..++..+++..|..+++.+++.. .. ...++..+|.+.++.|
T Consensus 141 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-------~~-~~~~~~~la~~~~~~g 189 (252)
T 2ho1_A 141 SRVFENLGLVSLQMKKPAQAKEYFEKSLRLN-------RN-QPSVALEMADLLYKER 189 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------SC-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-------cc-cHHHHHHHHHHHHHcC
Confidence 3344455555555555555555555554421 11 2344445555555544
No 57
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=85.84 E-value=2.5 Score=27.71 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhh
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFM 156 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~ 156 (159)
-++.=.+.+|..++..++|..|..+++.|+...... . ... ..+|...+..+..+
T Consensus 75 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~-~-~~~-~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 75 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ-R-LNF-GDDIPSALRIAKKK 128 (137)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CCC-TTHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH-H-HHH-HHHHHHHHHHHHHH
Confidence 366667788888888888888888888887765442 1 223 46677777666543
No 58
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=85.51 E-value=2.3 Score=28.54 Aligned_cols=47 Identities=9% Similarity=-0.202 Sum_probs=33.8
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.+|..++..++|..|..++..|+.... . ...++-.+|.++++.|+
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-------~-~~~~~~~~a~~~~~~~~ 96 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIELDK-------K-YIKGYYRRAASNMALGK 96 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCc-------c-cHHHHHHHHHHHHHhcc
Confidence 35678888888888888888888876521 2 34667777888777764
No 59
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=85.49 E-value=3.3 Score=26.19 Aligned_cols=50 Identities=4% Similarity=-0.149 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-++.+|..++..++|..|...+..++.... . ...++-.+|.+.++.|+
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~ 95 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDP-------A-YSKAYGRMGLALSSLNK 95 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCc-------c-CHHHHHHHHHHHHHhCC
Confidence 56678999999999999999999999987521 2 34566677777776653
No 60
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=85.48 E-value=1 Score=31.69 Aligned_cols=56 Identities=7% Similarity=-0.005 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-.+.+|..++..|+|..|..+++.|+........ ... ...++..++.+....|+
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~-~~~~~~~la~~~~~~g~ 162 (203)
T 3gw4_A 107 SANAYEVATVALHFGDLAGARQEYEKSLVYAQQADD-QVA-IACAFRGLGDLAQQEKN 162 (203)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-HHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc-hHH-HHHHHHHHHHHHHHCcC
Confidence 445678999999999999999999999987655321 122 34566778888777764
No 61
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=85.39 E-value=10 Score=28.74 Aligned_cols=54 Identities=6% Similarity=-0.037 Sum_probs=42.2
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
-..||..++..++|..|...++.|++.+......... ...++-.++.+++++|+
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~nlg~~y~~~~~ 211 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF-DVKVRYNHAKALYLDSR 211 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHhH
Confidence 4689999999999999999999999877654222223 45678888888888774
No 62
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=85.17 E-value=1.4 Score=32.20 Aligned_cols=59 Identities=14% Similarity=-0.043 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCC-CCCCHHHHHHHHHHhHhhcCC
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNG-TSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~-~~~~~~~il~~la~s~~~~g~ 159 (159)
..+.-+..+|..++..++|..|...++.|+........+ ... ...++..+|.+++..|+
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~ 142 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGK 142 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCC
Confidence 446678899999999999999999999999887653221 233 56778888888887774
No 63
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=85.07 E-value=1.2 Score=33.29 Aligned_cols=54 Identities=13% Similarity=0.058 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+..+.+..|..++..++|..|..+++.|++.... . ... ...++..++.+.+..|
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~--~~~-~~~~~~~l~~~~~~~g 57 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-D--LKT-LSAIYSQLGNAYFYLH 57 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-C--HHH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-c--HHH-HHHHHHHHHHHHHHcC
Confidence 3455566677777777777777777777764111 0 111 2455666666666555
No 64
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=84.97 E-value=2.4 Score=28.71 Aligned_cols=33 Identities=9% Similarity=-0.132 Sum_probs=21.7
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHD 133 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~ 133 (159)
++.-.+.+|..++..|+|..|..+++.++....
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 444456677777777777777777777765543
No 65
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=84.94 E-value=2.1 Score=32.71 Aligned_cols=55 Identities=5% Similarity=-0.065 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.=.+.+|..++..++|..|...++.|+...... ..... ...++-.+|.+.+++|+
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~-~~~~~-~~~~~~~lg~~y~~~g~ 251 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRI-NSMAL-IGQLYYQRGECLRKLEY 251 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TBCSS-HHHHHHHHHHHHHHTTC
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CcHHH-HHHHHHHHHHHHHHcCC
Confidence 456789999999999999999999999876542 22334 57778888888887774
No 66
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=84.93 E-value=7.1 Score=28.48 Aligned_cols=54 Identities=13% Similarity=0.262 Sum_probs=39.1
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCC-hHHhhccccCCcccCCCCCHHHH-HHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 59 FPTDEDLSGAATALLRLQDTYKLE-TASVARGELNGVQYTTQLTASDC-FELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 59 ~P~~~Dl~~A~~al~RLQ~~Y~L~-~~dla~G~l~g~~~~~~Ls~~DC-~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
..+..|+.. ||.-|++++..+ |. .-.|| |.+|..+|+.++|..|..+++.+|+.
T Consensus 45 S~~~~~~~~---gI~lLe~ll~~~~p~----------------~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 45 SKYNDDIRK---GIVLLEELLPKGSKE----------------EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp CSSHHHHHH---HHHHHHHHHHHSCHH----------------HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHH---HHHHHHHHHhcCCcc----------------chHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 566666664 555555565544 32 23566 67999999999999999999999874
No 67
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=84.88 E-value=2 Score=29.12 Aligned_cols=53 Identities=8% Similarity=-0.144 Sum_probs=38.9
Q ss_pred CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 99 QLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+-++.=.+.+|..++..++|..|..+++.|+..-. + ...++-.++.+++.+|+
T Consensus 49 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~~lg~~~~~~g~ 101 (142)
T 2xcb_A 49 HYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI-------N-EPRFPFHAAECHLQLGD 101 (142)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CTHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-------C-CcHHHHHHHHHHHHcCC
Confidence 34666677888888888888888888888876521 1 23566678888888774
No 68
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=84.68 E-value=2.1 Score=27.08 Aligned_cols=26 Identities=23% Similarity=0.482 Sum_probs=14.0
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
++.+|..++..+++..|..+++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~ 29 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALE 29 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 34455555555555555555555543
No 69
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=84.44 E-value=5.4 Score=29.81 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCC--CCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGT--STPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~--~~~~~~il~~la~s~~~~g~ 159 (159)
++.-.+.+|..++..++|..|..+++.+++......... .. ...++..+|.+..+.|+
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~ 251 (330)
T 3hym_B 192 DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKK 251 (330)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcC
Confidence 467788999999999999999999999998775432211 22 34677778888777764
No 70
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=84.28 E-value=3.2 Score=27.03 Aligned_cols=57 Identities=9% Similarity=-0.001 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhc
Q psy8176 99 QLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQ 157 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~ 157 (159)
+-++.=.+.+|..++..++|..|..+++.++...... ...+. ..++...++.+.-++
T Consensus 69 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~p~-~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 69 PNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEV-NNGSS-AREIDQLYYKASQQR 125 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-HTTTT-HHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCccc-CCchh-HHHHHHHHHHHHHhh
Confidence 3467777899999999999999999999999865432 22346 889999998876543
No 71
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=84.27 E-value=1.9 Score=33.45 Aligned_cols=57 Identities=12% Similarity=0.072 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 99 QLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.-++...+..|..++..|+|..|..+++.|++..... ... ...++..+|.+.+..|+
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~---~~~-~~~~~~~l~~~~~~~g~ 62 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTED---LKT-LSAIYSQLGNAYFYLHD 62 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC---HHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccc---HHH-HHHHHHHHHHHHHHhcC
Confidence 3456667778888888888888888888887652110 111 24566667777666653
No 72
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=83.65 E-value=1.4 Score=30.38 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHh----CCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYN----TQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~----~~dy~~A~~Wl~~Al~~ 131 (159)
+.-|+.||..+.+ .+|+..|..|++.|.+.
T Consensus 93 ~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 93 QDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 5567777777777 67777777777777653
No 73
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=83.47 E-value=1.5 Score=34.80 Aligned_cols=58 Identities=12% Similarity=-0.058 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.=++.||..++..++|..|...++.|++.+......... ...++..+|.+...+|+
T Consensus 140 ~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~lg~~y~~~~~ 197 (378)
T 3q15_A 140 KAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIR-TIQSLFVIAGNYDDFKH 197 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhh-HHHHHHHHHHHHHHhCC
Confidence 45667889999999999999999999999887764321223 45667777777776663
No 74
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=83.43 E-value=3.9 Score=27.47 Aligned_cols=30 Identities=7% Similarity=0.004 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
++.=.+.+|..++..++|..|..+++.|++
T Consensus 80 ~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 80 FIKGYIRKAACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 344455566666666666666666666654
No 75
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=83.29 E-value=2.4 Score=29.17 Aligned_cols=29 Identities=21% Similarity=0.127 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
.=.+.+|..++..++|..|..++..|+..
T Consensus 64 ~~~~nla~~~~~~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 64 PLYANMSQCYLNIGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 33455566666666666666666666543
No 76
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=83.26 E-value=3.2 Score=29.45 Aligned_cols=51 Identities=8% Similarity=0.069 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-++.+|..++..++|..|..+++.|+.... . ...++-.+|.++++.|+
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~-------~-~~~~~~~lg~~~~~~~~ 86 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDK-------H-LAVAYFQRGMLYYQTEK 86 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-------c-chHHHHHHHHHHHHccc
Confidence 467789999999999999999999999987531 2 34666677777777664
No 77
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=82.93 E-value=3.1 Score=30.96 Aligned_cols=29 Identities=24% Similarity=0.474 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
+.-++.+|..++..+++..|..|++.|++
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 34 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD 34 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 45567777777777777777777777765
No 78
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=82.72 E-value=6.4 Score=28.74 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 98 TQLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 98 ~~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
....+.-.+.+|..++..++|..|...++.|++.... ..+++..+|.+.++.|+
T Consensus 70 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~--------~~~~~~~l~~~~~~~~~ 123 (272)
T 3u4t_A 70 TKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT--------RLDMYGQIGSYFYNKGN 123 (272)
T ss_dssp TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CTHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc--------cHHHHHHHHHHHHHccC
Confidence 3455667788999999999999999999988874221 23556666666666653
No 79
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=82.67 E-value=1.6 Score=30.05 Aligned_cols=31 Identities=23% Similarity=0.280 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHHh----CCCchhHHHHHHHHHhh
Q psy8176 101 TASDCFELGRQSYN----TQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC~~iG~~~y~----~~dy~~A~~Wl~~Al~~ 131 (159)
++.=|+.||..+++ .+|+..|..|++.|.+.
T Consensus 56 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 56 SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC
Confidence 47889999999999 89999999999999764
No 80
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=82.58 E-value=0.43 Score=34.55 Aligned_cols=51 Identities=6% Similarity=0.003 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-.+.+|..++..+++..|...++.+++... . ...++..+|.+..+.|+
T Consensus 56 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-------~-~~~~~~~la~~~~~~~~ 106 (243)
T 2q7f_A 56 DAIPYINFANLLSSVNELERALAFYDKALELDS-------S-AATAYYGAGNVYVVKEM 106 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-------c-chHHHHHHHHHHHHhcc
Confidence 466677788888888888888888888776421 2 35666677777777664
No 81
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=82.51 E-value=1.4 Score=32.86 Aligned_cols=54 Identities=9% Similarity=0.020 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
.=++.+|..++..++|..|..+++.|+........ ... ...++..+|.+.+..|
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~-~~~~~~~l~~~~~~~g 97 (338)
T 3ro2_A 44 AIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD-QLG-EAKASGNLGNTLKVLG 97 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-HHH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccc-cHH-HHHHHHHHHHHHHHcc
Confidence 33556677777777777777777766665443211 112 3445555555555554
No 82
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=82.36 E-value=2.6 Score=31.27 Aligned_cols=58 Identities=14% Similarity=0.049 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCC-CCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNG-TSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~-~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.=.+.+|..++..++|..|..+++.|++........ ... ...++..+|.++++.|+
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~ 210 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGK 210 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCC
Confidence 34557789999999999999999999999887653211 223 55677788888887774
No 83
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=82.34 E-value=4.1 Score=29.56 Aligned_cols=51 Identities=6% Similarity=0.034 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHH----------------HHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEY----------------LAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~----------------la~s~~~~g~ 159 (159)
|+++-+..|..++..|+|..|...++.|+..-.. ..+++-. +|.++++.|+
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--------~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 69 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID--------RTEMYYWTNVDKNSEISSKLATELALAYKKNRN 69 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH--------HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC--------ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCC
Confidence 5788899999999999999999999999875322 2334434 8888887774
No 84
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=82.34 E-value=2.2 Score=30.73 Aligned_cols=76 Identities=5% Similarity=-0.013 Sum_probs=53.2
Q ss_pred hhHHHHHHHHHHHHHHhCCChHHhhccccCCcccCCCCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCC
Q psy8176 63 EDLSGAATALLRLQDTYKLETASVARGELNGVQYTTQLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTP 142 (159)
Q Consensus 63 ~Dl~~A~~al~RLQ~~Y~L~~~dla~G~l~g~~~~~~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~ 142 (159)
.++..|..-+.+..... -++.-.+.+|..++..++|..|...++.++.......+....
T Consensus 19 ~~~~~A~~~~~~a~~~~--------------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~- 77 (258)
T 3uq3_A 19 RQFDEAIEHYNKAWELH--------------------KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKV- 77 (258)
T ss_dssp TCHHHHHHHHHHHHHHS--------------------CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHH-
T ss_pred ccHHHHHHHHHHHHHhh--------------------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHH-
Confidence 35666776666655442 124557889999999999999999999999876553211111
Q ss_pred HHHHHHHHHHhHhhcCC
Q psy8176 143 KWEILEYLAYSKFMQDP 159 (159)
Q Consensus 143 ~~~il~~la~s~~~~g~ 159 (159)
...++..+|.+..+.|+
T Consensus 78 ~~~~~~~l~~~~~~~~~ 94 (258)
T 3uq3_A 78 ISKSFARIGNAYHKLGD 94 (258)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHccc
Confidence 26778888888887764
No 85
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=81.84 E-value=1.9 Score=27.04 Aligned_cols=55 Identities=4% Similarity=-0.031 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.=.+.+|..++..++|..|..+++.|+....... .... ...++-.++.+...+|
T Consensus 38 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-~~~~-~~~~~~~~~~~~~~~~ 92 (111)
T 2l6j_A 38 PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAE-HVAI-RSKLQYRLELAQGAVG 92 (111)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTT-SHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcc-HHHH-HHHHHHHHHHHHHHHH
Confidence 45578899999999999999999999997543221 0011 2566667777766554
No 86
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=81.76 E-value=1.4 Score=32.42 Aligned_cols=31 Identities=13% Similarity=0.275 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
++.-|+.||..+++.+++..|..|++.|++.
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~ 47 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ 47 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Confidence 4777889999999999999999999888753
No 87
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=81.60 E-value=4 Score=28.23 Aligned_cols=52 Identities=25% Similarity=0.206 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHH-HHhCCCc--hhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 100 LTASDCFELGRQ-SYNTQDF--YHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 100 Ls~~DC~~iG~~-~y~~~dy--~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
-++.-++.+|.. ++..++| ..|..+++.++... +. ...++..+|.++++.|+
T Consensus 76 ~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~-------p~-~~~~~~~la~~~~~~g~ 130 (177)
T 2e2e_A 76 ENAELYAALATVLYYQASQHMTAQTRAMIDKALALD-------SN-EITALMLLASDAFMQAN 130 (177)
T ss_dssp SCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhC-------CC-cHHHHHHHHHHHHHccc
Confidence 366666677777 5577777 77777777776541 12 34666677777777664
No 88
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=81.59 E-value=2.7 Score=32.60 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
.++...+.+|..++..|+|..|...++.++..
T Consensus 63 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 94 (365)
T 4eqf_A 63 KDWPGAFEEGLKRLKEGDLPVTILFMEAAILQ 94 (365)
T ss_dssp TTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 44555666666666666666666666666543
No 89
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=81.40 E-value=0.99 Score=32.84 Aligned_cols=56 Identities=5% Similarity=-0.204 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.=.+.+|..++..++|..|..+++.|++........... ..+++-.++.+.++.|
T Consensus 76 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-~~~~~~~~g~~~~~~~ 131 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKL-YAIYYLKEGQKFQQAG 131 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHH-HHHHHHHHhHHHHHhc
Confidence 5568899999999999999999999999764432100001 2245556666666555
No 90
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=81.33 E-value=6.4 Score=27.49 Aligned_cols=27 Identities=11% Similarity=-0.002 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhC-CCchhHHHHHHHHHh
Q psy8176 104 DCFELGRQSYNT-QDFYHTALWMGEALK 130 (159)
Q Consensus 104 DC~~iG~~~y~~-~dy~~A~~Wl~~Al~ 130 (159)
-++.+|..++.. +++..|...++.++.
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 78 INNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 344555555555 555555555555554
No 91
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=80.95 E-value=3.5 Score=29.36 Aligned_cols=48 Identities=15% Similarity=0.093 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
.-.+.+|..++..++|..|..++..|+.... . ...++-.+|.+++.+|
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p-------~-~~~~~~~lg~~~~~~~ 136 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDK-------N-NVKALYKLGVANMYFG 136 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-------T-CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-------c-cHHHHHHHHHHHHHcc
Confidence 4456677777888888888888887776421 1 2345555555555554
No 92
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=80.74 E-value=4.9 Score=27.00 Aligned_cols=51 Identities=18% Similarity=0.042 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-++.+|..++..+++..|..+++.++.... . ...++..+|.+.++.|+
T Consensus 109 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-------~-~~~~~~~la~~~~~~~~ 159 (186)
T 3as5_A 109 NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP-------N-EGKVHRAIAFSYEQMGR 159 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc-------c-chHHHHHHHHHHHHcCC
Confidence 355678889999999999999999988876521 2 34566677777766663
No 93
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=80.63 E-value=2.1 Score=33.20 Aligned_cols=54 Identities=9% Similarity=0.020 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
.=++.+|..++..++|..|..+++.|+........ ... ...++..+|.+++..|
T Consensus 48 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~-~~~~~~~la~~~~~~g 101 (406)
T 3sf4_A 48 AIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD-QLG-EAKASGNLGNTLKVLG 101 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-HHH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc-cHH-HHHHHHHHHHHHHHcC
Confidence 34567777777777888888777777766554211 112 3455666666666655
No 94
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=80.42 E-value=4 Score=28.18 Aligned_cols=33 Identities=6% Similarity=-0.194 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhh
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRH 132 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~ 132 (159)
=++.=.+.+|..++..|++..|..+++.|+...
T Consensus 87 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 355556666666666666666666666666543
No 95
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=80.21 E-value=3.7 Score=28.35 Aligned_cols=53 Identities=6% Similarity=-0.183 Sum_probs=38.5
Q ss_pred CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 99 QLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+-++.=-+.+|..++..++|..|..+++.|+..-. + ...++-.+|.++.++|+
T Consensus 52 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-------~-~~~~~~~lg~~~~~~g~ 104 (148)
T 2vgx_A 52 HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI-------X-EPRFPFHAAECLLQXGE 104 (148)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-------T-CTHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-------C-CchHHHHHHHHHHHcCC
Confidence 34666667788888888888888888888876421 1 23566778888887774
No 96
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=80.13 E-value=2.2 Score=33.83 Aligned_cols=56 Identities=14% Similarity=0.105 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
..=.|..|..++..|+|..|...++.|+........ ... ..+++-.+|.+.+.+|+
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~-~a~~~~~lg~~y~~~~~ 156 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSD-DIE-KAEFHFKVAEAYYHMKQ 156 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCC-HHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCC-hHH-HHHHHHHHHHHHHHcCC
Confidence 334677899999999999999999999988765321 223 56778888888887774
No 97
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=79.19 E-value=4.2 Score=28.50 Aligned_cols=30 Identities=20% Similarity=0.212 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+.=.+.+|..++..+++..|..+++.++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 37 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKS 37 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 444566777777777777777777777654
No 98
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=79.15 E-value=6.1 Score=28.95 Aligned_cols=58 Identities=9% Similarity=-0.145 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCC-CC--C-HHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGT-ST--P-KWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~-~~--~-~~~il~~la~s~~~~g~ 159 (159)
+...+.+|..+++.|+|..|..++..|++.-....... .. + ...+.-.++.++.++|+
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr 72 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRS 72 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCC
Confidence 67789999999999999999999999998765421111 11 0 12356666777766663
No 99
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=78.85 E-value=5.4 Score=28.58 Aligned_cols=50 Identities=8% Similarity=-0.069 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
++.-.+.+|..++..++|..|..+++.+++... + ..+++..+|.++.+.|
T Consensus 172 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-------~-~~~~~~~l~~~~~~~g 221 (258)
T 3uq3_A 172 DARGYSNRAAALAKLMSFPEAIADCNKAIEKDP-------N-FVRAYIRKATAQIAVK 221 (258)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCH-------H-HHHHHHHHHHHHHHHh
Confidence 345566677777777777777777777765321 2 3455556666666555
No 100
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=78.72 E-value=3 Score=32.79 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+...+.+|..++..++|..|...++.|++.
T Consensus 48 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 77 (411)
T 4a1s_A 48 CLELALEGERLCNAGDCRAGVAFFQAAIQA 77 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 444455666666666666666666666654
No 101
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=78.69 E-value=19 Score=27.18 Aligned_cols=57 Identities=5% Similarity=-0.075 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=.+.||..++..++|..|...++.|+...+........ ...++-.+|.+++++|+
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~-~~~~~~nlg~~y~~~~~ 211 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF-DVKVRYNHAKALYLDSR 211 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc-hHHHHHhHHHHHHHHhh
Confidence 3455689999999999999999999999776653211111 22677788888888774
No 102
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=78.62 E-value=6.1 Score=30.27 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
++...+.+|..++..|+|..|...+..|+..
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 33 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITR 33 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3455566666666666666666666666543
No 103
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=78.60 E-value=12 Score=24.91 Aligned_cols=51 Identities=8% Similarity=-0.035 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.=++.+|..++..+++..|..+++.++.... . ...++..+|.+.++.|+
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-------~-~~~~~~~~a~~~~~~~~ 125 (186)
T 3as5_A 75 NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP-------I-NFNVRFRLGVALDNLGR 125 (186)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc-------H-hHHHHHHHHHHHHHcCc
Confidence 356678899999999999999999999987522 2 34566667777766653
No 104
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=78.54 E-value=2.2 Score=33.54 Aligned_cols=55 Identities=9% Similarity=0.027 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.=++.+|..++..++|..|..+++.|+........ ... ...++..++.+++..|+
T Consensus 87 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~-~~~~~~~l~~~~~~~g~ 141 (411)
T 4a1s_A 87 AIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMND-RLG-EAKSSGNLGNTLKVMGR 141 (411)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-HHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccC-chH-HHHHHHHHHHHHHHCCC
Confidence 34678899999999999999999999887655321 123 45677777777777664
No 105
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=78.48 E-value=4.4 Score=31.06 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=19.6
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
++..++.+|..++..++|..|...++.+++
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 92 (368)
T 1fch_A 63 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQ 92 (368)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 345566667766777777777666666664
No 106
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=78.42 E-value=14 Score=26.67 Aligned_cols=28 Identities=14% Similarity=-0.018 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
.-++.+|..++..++|..|...++.|+.
T Consensus 78 ~~~~~la~~~~~~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 78 EVFNYLGIYLTQAGNFDAAYEAFDSVLE 105 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 3344455555555555555555555544
No 107
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=78.28 E-value=4.7 Score=32.31 Aligned_cols=58 Identities=10% Similarity=-0.040 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCC--CCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERN--GTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~--~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.-|-.||...+..|+|..|...++.|++....... ..+. ....+-.+|.+++.+|+
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~-~~~~~~nla~~y~~~g~ 109 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIR-SLVTWGNYAWVYYHMGR 109 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTT-THHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchH-HHHHHHHHHHHHHHcCC
Confidence 3556778999999999999999999999987654321 1233 44556678888887774
No 108
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=78.11 E-value=5.6 Score=31.80 Aligned_cols=53 Identities=21% Similarity=0.155 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
..=||.+|..+...|++..|..|++.|.. +...+.- ..++.-+++.++.++|+
T Consensus 171 ~~a~~~LG~al~~LG~~~eAl~~l~~a~~----g~~~P~~-~~da~~~~glaL~~lGr 223 (282)
T 4f3v_A 171 GAAGVAHGVAAANLALFTEAERRLTEAND----SPAGEAC-ARAIAWYLAMARRSQGN 223 (282)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT----STTTTTT-HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhc----CCCCccc-cHHHHHHHHHHHHHcCC
Confidence 34589999999999999999999999973 1110222 45777788988888874
No 109
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=77.97 E-value=5.8 Score=28.67 Aligned_cols=44 Identities=11% Similarity=-0.053 Sum_probs=23.1
Q ss_pred HHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 107 ELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 107 ~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
.+|..++..+++..|...++.+++... . ...++..+|.+++..|
T Consensus 76 ~la~~~~~~~~~~~A~~~~~~a~~~~~-------~-~~~~~~~la~~~~~~g 119 (252)
T 2ho1_A 76 ALAVVFQTEMEPKLADEEYRKALASDS-------R-NARVLNNYGGFLYEQK 119 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCc-------C-cHHHHHHHHHHHHHHh
Confidence 345555566666666666655554311 1 2345555566655554
No 110
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=77.23 E-value=3.8 Score=30.61 Aligned_cols=31 Identities=13% Similarity=0.120 Sum_probs=17.5
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
.++..++.+|..++..++|..|...++.+++
T Consensus 19 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 49 (327)
T 3cv0_A 19 MYHENPMEEGLSMLKLANLAEAALAFEAVCQ 49 (327)
T ss_dssp GGSSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3444555566666666666666555555554
No 111
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=76.87 E-value=6.6 Score=26.96 Aligned_cols=30 Identities=10% Similarity=0.123 Sum_probs=15.3
Q ss_pred CHHHHHHHHHHHHhCCCchhH-HHHHHHHHh
Q psy8176 101 TASDCFELGRQSYNTQDFYHT-ALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A-~~Wl~~Al~ 130 (159)
++.=.+.+|..+++.+++..| ..|++.|++
T Consensus 98 ~~~~~~~la~~~~~~~~~~~aa~~~~~~al~ 128 (150)
T 4ga2_A 98 QKDLVLKIAELLCKNDVTDGRAKYWVERAAK 128 (150)
T ss_dssp CHHHHHHHHHHHHHHCSSSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 444455555555555555443 335555554
No 112
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=76.48 E-value=8.5 Score=27.06 Aligned_cols=49 Identities=8% Similarity=-0.041 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.=-+.+|..++..++|..|...++.|+..-.. ..+++-.++.++.++|
T Consensus 70 ~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~--------~~~~~~~lg~~~~~lg 118 (151)
T 3gyz_A 70 VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN--------DYTPVFHTGQCQLRLK 118 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS--------CCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC--------CcHHHHHHHHHHHHcC
Confidence 334455666666666666666666666653211 1234445555555554
No 113
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=75.96 E-value=6.3 Score=28.05 Aligned_cols=50 Identities=6% Similarity=-0.007 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-.+.+|..++..++|..|..+++.+++... . ...++..+|.+..+.|+
T Consensus 159 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-------~-~~~~~~~la~~~~~~~~ 208 (243)
T 2q7f_A 159 TEARFQFGMCLANEGMLDEALSQFAAVTEQDP-------G-HADAFYNAGVTYAYKEN 208 (243)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-------c-cHHHHHHHHHHHHHccC
Confidence 44566777777777777777777777765421 2 34556666666666553
No 114
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=75.85 E-value=7.9 Score=28.12 Aligned_cols=77 Identities=12% Similarity=-0.030 Sum_probs=52.2
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCChHHhhccccCCcccCCCCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCC
Q psy8176 59 FPTDEDLSGAATALLRLQDTYKLETASVARGELNGVQYTTQLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNG 138 (159)
Q Consensus 59 ~P~~~Dl~~A~~al~RLQ~~Y~L~~~dla~G~l~g~~~~~~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~ 138 (159)
.....+++.|...+.++......++ +-++.-.+.+|..++..++|..|...++.|+....
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~----- 74 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTD---------------DERAQLLYERGVLYDSLGLRALARNDFSQALAIRP----- 74 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCH---------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-----
T ss_pred cCccchHHHHHHHHHHHHhcccccC---------------chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCC-----
Confidence 4455788888877766544322111 12356788999999999999999999999987522
Q ss_pred CCCCHHHHHHHHHHhHhhcC
Q psy8176 139 TSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 139 ~~~~~~~il~~la~s~~~~g 158 (159)
. ...++..+|.+++..|
T Consensus 75 --~-~~~~~~~la~~~~~~~ 91 (275)
T 1xnf_A 75 --D-MPEVFNYLGIYLTQAG 91 (275)
T ss_dssp --C-CHHHHHHHHHHHHHTT
T ss_pred --C-cHHHHHHHHHHHHHcc
Confidence 2 3455556666666655
No 115
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=75.60 E-value=3.9 Score=33.26 Aligned_cols=30 Identities=13% Similarity=0.218 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+..++.+|..++..|+|..|...++.++..
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 54 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIEL 54 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 344466666666666666666666666543
No 116
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=75.48 E-value=5.5 Score=31.94 Aligned_cols=30 Identities=17% Similarity=0.183 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+...+.+|..++..|+|..|...++.++..
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 35 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALEL 35 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhc
Confidence 456677777777777777777777777654
No 117
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=75.36 E-value=8.5 Score=28.14 Aligned_cols=57 Identities=11% Similarity=-0.115 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHH----HHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEIL----EYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il----~~la~s~~~~g~ 159 (159)
+.-...+|..+.+.++|..|...+..|+..++.-....++ ....+ -..+.++..+|+
T Consensus 57 a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr 117 (159)
T 2hr2_A 57 AFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGR 117 (159)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCC
Confidence 3456789999999999999999999999987664443445 66666 777777777663
No 118
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=75.30 E-value=18 Score=27.73 Aligned_cols=50 Identities=16% Similarity=-0.116 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-.+.+|..++..|+|..|...++.|+.... . ...++..++.++.+.|+
T Consensus 247 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~~l~~~~~~~g~ 296 (365)
T 4eqf_A 247 YSLWNRLGATLANGDRSEEAVEAYTRALEIQP-------G-FIRSRYNLGISCINLGA 296 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-------C-chHHHHHHHHHHHHCCC
Confidence 44566777777777777777777777765411 2 34556666666666653
No 119
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=74.98 E-value=7.7 Score=28.75 Aligned_cols=29 Identities=21% Similarity=0.397 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHh----CCCchhHHHHHHHHHh
Q psy8176 102 ASDCFELGRQSYN----TQDFYHTALWMGEALK 130 (159)
Q Consensus 102 ~~DC~~iG~~~y~----~~dy~~A~~Wl~~Al~ 130 (159)
+.-|+.+|..+.. .+++..|..|++.|++
T Consensus 182 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 214 (273)
T 1ouv_A 182 SPGCFNAGNMYHHGEGATKNFKEALARYSKACE 214 (273)
T ss_dssp HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHh
Confidence 4556667777766 6777777777776664
No 120
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=74.12 E-value=5.1 Score=30.67 Aligned_cols=56 Identities=18% Similarity=0.052 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhC-CCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNT-QDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~-~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-+..||..+... ++|..|...++.|++....... ... ...++..++.++.++|+
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~-~~~-~~~~~~~lg~~~~~~g~ 173 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS-VAL-SNKCFIKCADLKALDGQ 173 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC-HHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC-hHH-HHHHHHHHHHHHHHhCC
Confidence 44566899999996 9999999999999998765321 112 34667778888877764
No 121
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=74.05 E-value=11 Score=27.95 Aligned_cols=58 Identities=7% Similarity=0.015 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCC-----CCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGT-----STPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~-----~~~~~~il~~la~s~~~~g~ 159 (159)
++.-.+.+|..++..++|..|..+++.++.......... .. ...++..++.+..+.|+
T Consensus 239 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 301 (327)
T 3cv0_A 239 YVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREA-TRSMWDFFRMLLNVMNR 301 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTH-HHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhc-CHHHHHHHHHHHHhcCC
Confidence 355567888999999999999999998887654421111 11 35677788888887774
No 122
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=74.02 E-value=9.7 Score=26.15 Aligned_cols=50 Identities=4% Similarity=0.104 Sum_probs=39.1
Q ss_pred CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHh
Q psy8176 99 QLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYS 153 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s 153 (159)
+-++.=.+.+|..++..++|..|..+++.++..... ... ...++..+..+
T Consensus 112 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~----~~~-~~~~~~~i~~~ 161 (177)
T 2e2e_A 112 SNEITALMLLASDAFMQANYAQAIELWQKVMDLNSP----RIN-RTQLVESINMA 161 (177)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT----TSC-HHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC----Ccc-HHHHHHHHHHH
Confidence 457778899999999999999999999999876433 234 66777766654
No 123
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=72.74 E-value=6.8 Score=32.57 Aligned_cols=53 Identities=17% Similarity=0.153 Sum_probs=39.8
Q ss_pred CCCHHHHHHHHHHHHhCCCc-hhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 99 QLTASDCFELGRQSYNTQDF-YHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy-~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+-++.-++.+|+.++..++| ..|..+++.|++.-. . ..+++..||.++++.|+
T Consensus 99 ~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p-------~-~~~a~~~lg~~~~~~g~ 152 (474)
T 4abn_A 99 QVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEP-------E-LVEAWNQLGEVYWKKGD 152 (474)
T ss_dssp CCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHHTC
T ss_pred chhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCC-------C-CHHHHHHHHHHHHHcCC
Confidence 35688889999999999999 999999999886521 2 35666677777776663
No 124
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=71.93 E-value=7.8 Score=28.87 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
-.+.-++.+|..++..++|..|..+++.+++.... ...++..+|.+..+.|
T Consensus 234 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~--------~~~~~~~la~~~~~~g 284 (330)
T 3hym_B 234 KWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ--------NASTYSAIGYIHSLMG 284 (330)
T ss_dssp TCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc--------chHHHHHHHHHHHHhc
Confidence 34567788999999999999999999999865321 2245555666665555
No 125
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=71.73 E-value=7.7 Score=30.69 Aligned_cols=29 Identities=14% Similarity=0.205 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
+.-++.+|..++..++|..|...++.++.
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~ 54 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVD 54 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 44455566666666666666666665554
No 126
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=71.48 E-value=9.9 Score=29.01 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCC----CCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERN----GTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~----~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-.+.+|..++..|+|..|..+++.|+........ .... ...+...|+.++.++|+
T Consensus 284 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 345 (368)
T 1fch_A 284 YIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAM-SENIWSTLRLALSMLGQ 345 (368)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCC-CHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccch-hhHHHHHHHHHHHHhCC
Confidence 4566788999999999999999999999887654311 1122 36788889988888774
No 127
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=71.25 E-value=3.9 Score=35.02 Aligned_cols=54 Identities=17% Similarity=0.183 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHhh-hhccCC---CCCCCHHHHHHHHHHhHhhcC
Q psy8176 104 DCFELGRQSYNTQDFYHTALWMGEALKR-HDMERN---GTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 104 DC~~iG~~~y~~~dy~~A~~Wl~~Al~~-~~~~~~---~~~~~~~~il~~la~s~~~~g 158 (159)
=+|.+|+.+.-+++|..|.++|.+|++. ...+.. .... +..||.||.-+..-+|
T Consensus 222 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~~~~n-~~~ILkyLIpv~LLlG 279 (455)
T 3t5v_B 222 YRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRN-GTRILNYMIPTGLILG 279 (455)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHHHHHH-HHHHHHHHHHHHHHTT
T ss_pred eeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchhhhhH-HHHHHHHHHHHHHHcC
Confidence 3799999999999999999999999998 443211 1123 6678888876655444
No 128
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=71.09 E-value=8.4 Score=29.43 Aligned_cols=56 Identities=5% Similarity=0.015 Sum_probs=38.0
Q ss_pred HHH-HHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 103 SDC-FELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 103 ~DC-~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+| ..+|..+...++|..|...++.|++........... ....+..++.++..+|+
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~lg~~~~~~g~ 214 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWS-LKDYFLKKGLCQLAATD 214 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGG-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHH-HHHHHHHHHHHHHHcCC
Confidence 344 468999999999999999999999764432211112 33456666777766653
No 129
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.96 E-value=18 Score=23.33 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=30.2
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhH
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSK 154 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~ 154 (159)
-+.+|..+++.|+|..|..-++..+..-.. .+. +..|-..++.+.
T Consensus 46 ~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~----~~~-~~~i~~~I~~A~ 90 (93)
T 3bee_A 46 LSLIANDHFISFRFQEAIDTWVLLLDSNDP----NLD-RVTIIESINKAK 90 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTCCCT----TCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC----Ccc-HHHHHHHHHHHH
Confidence 467888888888888888877776653222 345 666666666543
No 130
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=70.13 E-value=7.5 Score=25.72 Aligned_cols=30 Identities=10% Similarity=-0.056 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+.=-+.+|..+...+++..|...++.|+..
T Consensus 51 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 51 EEAWRSLGLTQAENEKDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 344456666666667777776666666653
No 131
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=69.70 E-value=5.4 Score=25.36 Aligned_cols=33 Identities=6% Similarity=0.016 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhc
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDM 134 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~ 134 (159)
+.=.+.+|..++..+++..|..+++.|++....
T Consensus 41 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 41 VGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 445788999999999999999999999987654
No 132
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=68.97 E-value=9.2 Score=27.77 Aligned_cols=48 Identities=8% Similarity=-0.116 Sum_probs=29.2
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHh
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKF 155 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~ 155 (159)
-++.-.+.+|..+...|++..|...++.|+..- ++ ..+++..++.++.
T Consensus 37 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-------P~-~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 37 QDPEALYWLARTQLKLGLVNPALENGKTLVART-------PR-YLGGYMVLSEAYV 84 (217)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CC-cHHHHHHHHHHHH
Confidence 455666677777777777777777777776541 12 3345555555544
No 133
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=68.72 E-value=13 Score=30.69 Aligned_cols=58 Identities=14% Similarity=-0.010 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-...+|..++..|++..|...++.+++.....+..+.. ...++..++.++.+.|+
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~-~~~~~~~l~~~~~~~g~ 531 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKP-WAATWANLGHAYRKLKM 531 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGG-GHHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhh-HHHHHHHHHHHHHHhcC
Confidence 45667889999999999999999999998876542111111 26777788888877764
No 134
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=68.17 E-value=13 Score=29.34 Aligned_cols=58 Identities=10% Similarity=0.077 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCC------C-HHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTST------P-KWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~------~-~~~il~~la~s~~~~g~ 159 (159)
+.-.+.+|..++..++|..|...++.|+............ + ...++..+|.+++++|+
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~ 211 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 211 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4567789999999999999999999999876543210000 0 24677778888887764
No 135
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=67.86 E-value=9.5 Score=30.09 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
.=++.+|..++..++|..|...++.|+..
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34455666666666666666666666654
No 136
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=67.75 E-value=15 Score=25.45 Aligned_cols=52 Identities=12% Similarity=-0.144 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
++.=.+.+|..+...|++..|...++.+++.-.. .. ...+...|+.++..+|
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~-----~~-~~~a~~~l~~~~~~~g 158 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKVNLG-----AQ-DGEVKKTFMDILSALG 158 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-----TT-TTHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc-----cC-hHHHHHHHHHHHHHhC
Confidence 4667789999999999999999999999865221 12 2345556666666555
No 137
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=67.14 E-value=32 Score=26.04 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHD 133 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~ 133 (159)
++.=.+.+|..++..|+|..|..+++.|+....
T Consensus 71 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 71 SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 355677888888888888888888888877544
No 138
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=67.08 E-value=8.9 Score=31.01 Aligned_cols=49 Identities=16% Similarity=-0.015 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.=.+.+|..+++.++|..|..+++.|++.- .. ...++-.+|.+++++|
T Consensus 273 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-------p~-~~~a~~~lg~~~~~~g 321 (370)
T 1ihg_A 273 LSCVLNIGACKLKMSDWQGAVDSCLEALEID-------PS-NTKALYRRAQGWQGLK 321 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-------TT-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHhC-------ch-hHHHHHHHHHHHHHcc
Confidence 4445567777777777777777777776531 12 3445555555555554
No 139
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=66.82 E-value=6.6 Score=28.59 Aligned_cols=30 Identities=10% Similarity=0.015 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHh----CCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYN----TQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~----~~dy~~A~~Wl~~Al~~ 131 (159)
+.-|+.||..+.. .+|+..|..|++.|++.
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 6889999999999 88999999999999875
No 140
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=66.56 E-value=12 Score=31.06 Aligned_cols=57 Identities=16% Similarity=0.120 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCC--------CCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGT--------STPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~--------~~~~~~il~~la~s~~~~g~ 159 (159)
+.-.+.+|..+++.++|..|...+..|++......... .. ...++..+|.+++++|+
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~ 332 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESF-LLAAFLNLAMCYLKLRE 332 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHH-HHHHHHHHHHHHHHhcC
Confidence 34567899999999999999999999998755421100 01 24667778888887764
No 141
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=66.09 E-value=8 Score=29.77 Aligned_cols=53 Identities=11% Similarity=-0.012 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 104 DCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 104 DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
-+..||..+.. ++|..|...++.|+........ ... ...++..++.++.++|+
T Consensus 118 ~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~-~~~-~~~~~~~lg~~~~~~g~ 170 (307)
T 2ifu_A 118 ALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER-LRQ-AAELIGKASRLLVRQQK 170 (307)
T ss_dssp HHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC-HHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC-hhH-HHHHHHHHHHHHHHcCC
Confidence 34467777766 8888888888888776655321 111 34556666666666653
No 142
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=65.83 E-value=7.8 Score=23.86 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=27.2
Q ss_pred HH-HHHHHHHHHHhCCCchhHHHHHHHHHhhh
Q psy8176 102 AS-DCFELGRQSYNTQDFYHTALWMGEALKRH 132 (159)
Q Consensus 102 ~~-DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~ 132 (159)
+. =.+.+|..++..++|..|..+++.|+...
T Consensus 34 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 34 KDEAYYLMGNAYRKLGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 44 57889999999999999999999999763
No 143
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=65.71 E-value=15 Score=26.65 Aligned_cols=51 Identities=10% Similarity=-0.053 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 104 DCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 104 DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
-.+.+|..++..++|..|...++.++. ... . ... ...++..+|.+..+.|+
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~-~--~~~-~~~~~~~lg~~~~~~~~ 89 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFS-KVN-A--TKA-KSADFEYYGKILMKKGQ 89 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHT-TSC-T--TTC-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHh-ccC-c--hhH-HHHHHHHHHHHHHHccc
Confidence 478899999999999999999999987 221 1 112 35667778887777664
No 144
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=65.65 E-value=14 Score=28.55 Aligned_cols=54 Identities=4% Similarity=-0.154 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCC-CCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNG-TSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~-~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.+|..+...|+|..|...++.|+......... ... ...++..++.+++..|+
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~ 150 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWAR 150 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcC
Confidence 5679999999999999999999999887653322 122 44566667877777764
No 145
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=64.97 E-value=26 Score=29.28 Aligned_cols=49 Identities=12% Similarity=-0.126 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhc
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQ 157 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~ 157 (159)
++.=.+.+|..++..++|..|..+++.|++... . ..+++..++.++.++
T Consensus 90 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 90 HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLP-------E-EPYITAQLLNWRRRL 138 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------C-CHHHHHHHHHHHHHh
Confidence 355667888888888888888888888876521 2 356777788887776
No 146
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=64.53 E-value=34 Score=26.44 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~ 130 (159)
++.-.+.+|..++..|+|..|...++.|+.
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 95 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALR 95 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 455566667777777777777766666664
No 147
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=64.20 E-value=37 Score=24.37 Aligned_cols=46 Identities=9% Similarity=0.047 Sum_probs=22.2
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
.+.+|..+...|+|..|..+++.|++.. ++ ..+++..++.++.+.|
T Consensus 154 ~~~la~~~~~~g~~~~A~~~~~~al~~~-------P~-~~~~~~~la~~~~~~g 199 (217)
T 2pl2_A 154 RSALAELYLSMGRLDEALAQYAKALEQA-------PK-DLDLRVRYASALLLKG 199 (217)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHS-------TT-CHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CC-ChHHHHHHHHHHHHcc
Confidence 3445555555555555555555555421 11 2355556666665555
No 148
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=64.02 E-value=9.1 Score=29.46 Aligned_cols=95 Identities=13% Similarity=-0.026 Sum_probs=52.5
Q ss_pred CChhhHHHHHHHHHHHHHHhCCChHHhhccc--cC-----CcccCC-CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 60 PTDEDLSGAATALLRLQDTYKLETASVARGE--LN-----GVQYTT-QLTASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 60 P~~~Dl~~A~~al~RLQ~~Y~L~~~dla~G~--l~-----g~~~~~-~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+...|...++.++.+|=.+|.- .+..... +. -...+. ...+.=+..+|..+...++|..|...++.|+..
T Consensus 107 ~~~g~~~~~a~~~~~lg~~~~~--g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 107 VENGTPDTAAMALDRAGKLMEP--LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HTTTCHHHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3344555666777777777643 2222211 00 000011 112334557999999999999999999999987
Q ss_pred hhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 132 HDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 132 ~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
...... ... ....+-.++.+...+|
T Consensus 185 ~~~~~~-~~~-~~~~~~~~g~~~~~~g 209 (307)
T 2ifu_A 185 YKEMEN-YPT-CYKKCIAQVLVQLHRA 209 (307)
T ss_dssp HHHTTC-HHH-HHHHHHHHHHHHHHTT
T ss_pred HHHcCC-hhH-HHHHHHHHHHHHHHcC
Confidence 665321 111 2334444555555444
No 149
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=63.60 E-value=26 Score=22.45 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHHhCCC---chhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhh
Q psy8176 101 TASDCFELGRQSYNTQD---FYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFM 156 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~d---y~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~ 156 (159)
++.--+.+|..+|..++ ...|..+++.|+..=. + ....+-.|+...|+
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp-------~-~~rA~~~lg~~~~~ 55 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEP-------Y-NEAALSLIANDHFI 55 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCc-------C-CHHHHHHHHHHHHH
Confidence 46777889999986665 7999999999997421 2 34455555655543
No 150
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=63.33 E-value=6.9 Score=31.03 Aligned_cols=58 Identities=9% Similarity=-0.151 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCC-C--------HHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTST-P--------KWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~-~--------~~~il~~la~s~~~~g~ 159 (159)
+..++.+|..++..++|..|...++.|+............ . ...++..+|.+++++|+
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~ 245 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKR 245 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5567889999999999999999999999765432100000 0 01366677887777763
No 151
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=63.33 E-value=29 Score=27.23 Aligned_cols=47 Identities=9% Similarity=-0.034 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 104 DCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 104 DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
-.+.+|..+...|++..|..+++.++.... . ...++..++.+..+.|
T Consensus 297 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p-------~-~~~~~~~l~~~~~~~~ 343 (450)
T 2y4t_A 297 SKERICHCFSKDEKPVEAIRVCSEVLQMEP-------D-NVNALKDRAEAYLIEE 343 (450)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCc-------c-cHHHHHHHHHHHHHhc
Confidence 345566777777777777777777665311 1 2344555555555544
No 152
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=63.21 E-value=18 Score=29.10 Aligned_cols=57 Identities=11% Similarity=0.109 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccC---------CCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMER---------NGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~---------~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+...+.+|..++..++|..|..-++.|++...... ..... ...++..+|.+++++|+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~ 288 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSD 288 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccC
Confidence 34478899999999999999999999998544310 01112 45677788888888764
No 153
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=62.71 E-value=39 Score=28.09 Aligned_cols=31 Identities=6% Similarity=-0.025 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
++.=.+.+|..++..++|..|..+++.|++.
T Consensus 73 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 73 YIKGYYRRAASNMALGKFRAALRDYETVVKV 103 (477)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3555677788888888888888888877764
No 154
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=61.72 E-value=15 Score=28.99 Aligned_cols=47 Identities=6% Similarity=-0.063 Sum_probs=33.8
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.+|..+++.++|..|...++.|+.... . ...++-.+|.+++.+|+
T Consensus 233 ~~nla~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~a~~~lg~a~~~~g~ 279 (338)
T 2if4_A 233 HLNIAACLIKLKRYDEAIGHCNIVLTEEE-------K-NPKALFRRGKAKAELGQ 279 (338)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------C-CHHHHHHHHHHHHHcCC
Confidence 46788888899999999999988886421 2 34566667777766653
No 155
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=60.91 E-value=8.9 Score=26.67 Aligned_cols=48 Identities=2% Similarity=-0.119 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
...+..|..+...|++..|...++.++..-.. ..+++-.+|.++.+.|
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~--------~~~a~~~la~~~~~~g 54 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQS--------RGDVKLAKADCLLETK 54 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHT--------SHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC--------cHHHHHHHHHHHHHCC
Confidence 45788899999999999999988888764322 3455556666666655
No 156
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=60.22 E-value=9.8 Score=29.53 Aligned_cols=54 Identities=11% Similarity=-0.107 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 104 DCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 104 DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
=++.+|..++..|+|..|..+++.|+........ ... ...++..++.+.+..|+
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~-~~~~~~~la~~~~~~G~ 108 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV-WHY-ALWSLIQQSEILFAQGF 108 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-HHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc-HHH-HHHHHHHHHHHHHHCCC
Confidence 3567899999999999999999999987765321 112 33446667777776663
No 157
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=57.09 E-value=18 Score=29.84 Aligned_cols=48 Identities=8% Similarity=0.056 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 103 SDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 103 ~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
.=.+.+|..+++.++|..|...+..|+.... . ...++-.+|.+++++|
T Consensus 318 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~a~~~~g~a~~~~g 365 (457)
T 1kt0_A 318 AAFLNLAMCYLKLREYTKAVECCDKALGLDS-------A-NEKGLYRRGEAQLLMN 365 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-------T-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-------c-cHHHHHHHHHHHHHcc
Confidence 3345677777777777777777777776421 1 2344445555555544
No 158
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=56.92 E-value=14 Score=30.95 Aligned_cols=57 Identities=7% Similarity=-0.109 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCC-CCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERN-GTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~-~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.=.-.||..+...|+|..|..-++.||..+..--. ..++ ....+..||..+..+|+
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~ 397 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLEN 397 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccC
Confidence 333446899999999999999999999988876322 2233 55667788888888774
No 159
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=56.27 E-value=10 Score=24.45 Aligned_cols=32 Identities=6% Similarity=-0.039 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHD 133 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~ 133 (159)
+.=-+.+|..++..|+|..|..+++.++....
T Consensus 61 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 92 (117)
T 3k9i_A 61 QALRVFYAMVLYNLGRYEQGVELLLKIIAETS 92 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 44457899999999999999999999997643
No 160
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=55.66 E-value=60 Score=24.01 Aligned_cols=30 Identities=3% Similarity=-0.127 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+.--+.+|..++..|++..|..+++.|++.
T Consensus 306 ~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 306 VNALKDRAEAYLIEEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 455666777777777777777777777653
No 161
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=54.77 E-value=15 Score=23.25 Aligned_cols=33 Identities=12% Similarity=-0.064 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhc
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDM 134 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~ 134 (159)
+.=.+.+|..+...|++..|..+++.|+.....
T Consensus 53 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 53 SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQS 85 (115)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccc
Confidence 445688999999999999999999999987654
No 162
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=53.87 E-value=22 Score=29.72 Aligned_cols=55 Identities=4% Similarity=-0.126 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHhhhhcc-CCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 104 DCFELGRQSYNTQDFYHTALWMGEALKRHDME-RNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 104 DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~-~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++++-++.+.+.|+|..|...++.||.....- .+..+. ...++..||.++..+|+
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~~~nLa~~y~~~g~ 355 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVY-MLHMMYQAMGVCLYMQD 355 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchH-HHHHHHHHHHHHHhhcC
Confidence 55666777788899999999999999876652 111234 56778889998888874
No 163
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=52.68 E-value=35 Score=26.33 Aligned_cols=50 Identities=10% Similarity=0.019 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-.+.+|..+...|++..|...++.|++. .++ ..+++-.++.++.++|+
T Consensus 339 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~-------~p~-~~~a~~~lg~~~~~~~~ 388 (388)
T 1w3b_A 339 AAAHSNLASVLQQQGKLQEALMHYKEAIRI-------SPT-FADAYSNMGNTLKEMQD 388 (388)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHTT-------CTT-CHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------CCC-CHHHHHhHHHHHHHccC
Confidence 444566666667777777777777666642 112 34666666666666553
No 164
>2lnz_A Ubiquitin-like protein MDY2; dimerization, homodimerization, protein binding; NMR {Saccharomyces cerevisiae}
Probab=52.55 E-value=9.3 Score=23.84 Aligned_cols=16 Identities=31% Similarity=0.466 Sum_probs=12.5
Q ss_pred HHHH-HHHHHHHHHhCC
Q psy8176 66 SGAA-TALLRLQDTYKL 81 (159)
Q Consensus 66 ~~A~-~al~RLQ~~Y~L 81 (159)
.+|+ ..|-|||+-|+|
T Consensus 46 ~~A~~~~LqRLQKGWeL 62 (64)
T 2lnz_A 46 QAAVRQVMERLQKGWSL 62 (64)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcc
Confidence 3455 889999998876
No 165
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=50.53 E-value=36 Score=27.73 Aligned_cols=30 Identities=27% Similarity=0.489 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHh----CCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQSYN----TQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~----~~dy~~A~~Wl~~Al~ 130 (159)
++.-++.||..++. .+++..|..|++.|.+
T Consensus 362 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~ 395 (490)
T 2xm6_A 362 EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAE 395 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHh
Confidence 35667777777777 7778888888877765
No 166
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=49.40 E-value=22 Score=30.26 Aligned_cols=58 Identities=2% Similarity=-0.162 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCC-CCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERN-GTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~-~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.=.-.||..+...|+|..|..-++.||..+..--. ..+. ....+..||..+..+|+
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~~G~ 408 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ-LGMAVMRAGLTNWHAGH 408 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHHHCCC
Confidence 3455567899999999999999999999988776322 2233 55667888888888774
No 167
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=49.20 E-value=37 Score=26.93 Aligned_cols=49 Identities=12% Similarity=-0.086 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+.--+.+|..++..|+|..|..+++.+++.. +. ...++-.+|.+++++|
T Consensus 39 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-------p~-~~~~~~~l~~~~~~~g 87 (514)
T 2gw1_A 39 PVFYSNLSACYVSVGDLKKVVEMSTKALELK-------PD-YSKVLLRRASANEGLG 87 (514)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------SC-CHHHHHHHHHHHHHTT
T ss_pred HHHHHhHHHHHHHHhhHHHHHHHHHHHhccC-------hH-HHHHHHHHHHHHHHHh
Confidence 3445667777778888888888887777541 12 3455556666666665
No 168
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=48.98 E-value=28 Score=29.07 Aligned_cols=53 Identities=15% Similarity=0.073 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 99 QLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+-++.-.+.+|..++..++|..|..+++.|++... . ..+++..+|.++.+.|+
T Consensus 54 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-------~-~~~~~~~la~~~~~~g~ 106 (568)
T 2vsy_A 54 PGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAP-------E-HPGIALWLGHALEDAGQ 106 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC-------C-CHHHHHHHHHHHHHcCC
Confidence 34677778899999999999999999999987521 2 45778888998888874
No 169
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=48.97 E-value=56 Score=24.14 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=40.0
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhc---cCC---------------CCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDM---ERN---------------GTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~---~~~---------------~~~~~~~~il~~la~s~~~~g~ 159 (159)
-+.+|...|..+.|.+|..=++.||+..+. ... .-.. ..|+.=.+|.|+.++|+
T Consensus 66 l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~-e~Elkykia~C~~~l~~ 137 (167)
T 3ffl_A 66 LVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPS-EIEVKYKLAECYTVLKQ 137 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCC-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccc-hHHHHHHHHHHHHHHCC
Confidence 367899999999999999999999876552 110 0122 55787788999988874
No 170
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=48.07 E-value=32 Score=30.77 Aligned_cols=43 Identities=9% Similarity=0.014 Sum_probs=21.1
Q ss_pred HHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 108 LGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 108 iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+|..++..|+|..|...++.|++.- .+ ..+++-.|+.++.++|
T Consensus 49 Lg~~l~~~g~~~eA~~~~~~Al~l~-------P~-~~~a~~nLg~~l~~~g 91 (723)
T 4gyw_A 49 LASVLQQQGKLQEALMHYKEAIRIS-------PT-FADAYSNMGNTLKEMQ 91 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC-------CC-CHHHHHHHHHHHHHcC
Confidence 4555555555555555555554321 12 3455555565555554
No 171
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=47.56 E-value=23 Score=29.30 Aligned_cols=33 Identities=3% Similarity=-0.113 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhh
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRH 132 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~ 132 (159)
-++.-.+.+|..++..++|..|..+++.|++..
T Consensus 256 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 288 (474)
T 4abn_A 256 SNPDLHLNRATLHKYEESYGEALEGFSQAAALD 288 (474)
T ss_dssp GCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 457778999999999999999999999998753
No 172
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=47.48 E-value=34 Score=28.02 Aligned_cols=50 Identities=10% Similarity=0.042 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
+.-...+|..++..|++..|..+++.+++.. ++ ...++..|+.++.+.|+
T Consensus 516 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-------p~-~~~~~~~l~~~~~~~g~ 565 (597)
T 2xpi_A 516 AATWANLGHAYRKLKMYDAAIDALNQGLLLS-------TN-DANVHTAIALVYLHKKI 565 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-------SC-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-------CC-ChHHHHHHHHHHHHhCC
Confidence 4557889999999999999999999998752 12 34667777777777664
No 173
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=46.52 E-value=21 Score=29.17 Aligned_cols=26 Identities=27% Similarity=0.515 Sum_probs=17.6
Q ss_pred HHHHHHHHHh----CCCchhHHHHHHHHHh
Q psy8176 105 CFELGRQSYN----TQDFYHTALWMGEALK 130 (159)
Q Consensus 105 C~~iG~~~y~----~~dy~~A~~Wl~~Al~ 130 (159)
|+.||..++. .+++..|..|++.|.+
T Consensus 78 ~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 107 (490)
T 2xm6_A 78 EYVLGLRYMNGEGVPQDYAQAVIWYKKAAL 107 (490)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 5566766666 6677777777776654
No 174
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=46.35 E-value=86 Score=23.10 Aligned_cols=51 Identities=10% Similarity=-0.159 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.=.+.+|..+...+++..|...++.++... +. ..+++..+|.+.+..|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-------~~-~~~~~~~la~~~~~~~~ 203 (359)
T 3ieg_A 153 DAELRELRAECFIKEGEPRKAISDLKAASKLK-------SD-NTEAFYKISTLYYQLGD 203 (359)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-------SC-CHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-------CC-CHHHHHHHHHHHHHcCC
Confidence 35556677777788888888887777776531 12 34666677777777664
No 175
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=45.76 E-value=41 Score=26.97 Aligned_cols=51 Identities=12% Similarity=-0.048 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
++.-.+.+|..++..|+|..|...++.++..- ++ ..+++-.+|.++.+.|+
T Consensus 58 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-------p~-~~~~~~~la~~~~~~g~ 108 (537)
T 3fp2_A 58 EPVFYSNISACYISTGDLEKVIEFTTKALEIK-------PD-HSKALLRRASANESLGN 108 (537)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-------Cc-hHHHHHHHHHHHHHcCC
Confidence 35667889999999999999999999998752 12 34666677777776663
No 176
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=45.70 E-value=40 Score=25.57 Aligned_cols=49 Identities=12% Similarity=0.036 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
+..-+.+|..+...|++..|..-++.|+..-. . ..+++-.||.++.+.|
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P-------~-~~~a~~~la~~~~~~g 165 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSN-------Q-NGEIGLLLAETLIALN 165 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT-------S-CHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCC-------c-chhHHHHHHHHHHHCC
Confidence 45678899999999999999999999886432 2 3456666676666665
No 177
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=45.30 E-value=24 Score=29.36 Aligned_cols=58 Identities=5% Similarity=-0.139 Sum_probs=42.4
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCC-CCCCHHHHHHHHHHhHhhcCC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNG-TSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~-~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.=.-.||..+...|+|..|....+.|+..+..--++ .+. ....+..||..+..+|+
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~l~nLa~~~~~~g~ 386 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV-RGVQVMKVGKLQLHQGM 386 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH-HHHHHHHHHHHHHhcCC
Confidence 34445568889999999999999999999888763222 233 45667778888877774
No 178
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=44.63 E-value=28 Score=30.34 Aligned_cols=31 Identities=10% Similarity=-0.011 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
++.-.+.+|..++..|+|..|...++.|++.
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~ 462 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAER 462 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Confidence 4566788888888888888888888888764
No 179
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=44.02 E-value=26 Score=27.49 Aligned_cols=33 Identities=3% Similarity=-0.079 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhc
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDM 134 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~ 134 (159)
+.=-+.+|+.+...++|..|...+..|+.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 175 VDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 444567788888888888888888888766544
No 180
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=43.70 E-value=25 Score=30.67 Aligned_cols=51 Identities=8% Similarity=0.049 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHh
Q psy8176 104 DCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKF 155 (159)
Q Consensus 104 DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~ 155 (159)
=.|.+|+...-+++|..|...|.+|++.-......... +..++.++.-+..
T Consensus 272 Y~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~gf-r~~a~K~lI~V~L 322 (523)
T 4b4t_S 272 YFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGF-LQQSNKLHCCIQL 322 (523)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhhH-HHHHHHHHHhHHh
Confidence 34788999999999999999999998764432211112 4566666555443
No 181
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=42.51 E-value=44 Score=26.49 Aligned_cols=50 Identities=4% Similarity=-0.037 Sum_probs=34.9
Q ss_pred HHHHHHHHhCCCchhHHHHHHHHHhhhhccCC-CCCCCHHHHHHHHHHhHhh
Q psy8176 106 FELGRQSYNTQDFYHTALWMGEALKRHDMERN-GTSTPKWEILEYLAYSKFM 156 (159)
Q Consensus 106 ~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~-~~~~~~~~il~~la~s~~~ 156 (159)
..+|..++..|+|..|...++.|+........ .... ..+++-.++++..+
T Consensus 98 ~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~ 148 (472)
T 4g1t_A 98 GNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLK 148 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHH
Confidence 46899999999999999999999877654322 1233 45555555555443
No 182
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.24 E-value=49 Score=25.81 Aligned_cols=59 Identities=8% Similarity=0.077 Sum_probs=42.6
Q ss_pred CCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 99 QLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 99 ~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+-+.=+..+|+..+..|+|..|..-+..++........ ... ..+++-.++.....+|+
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~ 190 (434)
T 4b4t_Q 132 FLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDD-KPS-LVDVHLLESKVYHKLRN 190 (434)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC-STH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc-chh-HHHHHHHHHHHHHHhCc
Confidence 344555678999999999999999999999876654321 223 56677677777766654
No 183
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=40.73 E-value=53 Score=27.88 Aligned_cols=54 Identities=7% Similarity=-0.031 Sum_probs=39.0
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccC-CCCCCCHHHHHHHHHHhHhhcCC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMER-NGTSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~-~~~~~~~~~il~~la~s~~~~g~ 159 (159)
.+.-+..+..+|+|..|..-++.||.....-- +..+. ...++..||.++..+|+
T Consensus 312 ~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~-~a~~~~nLa~~y~~~g~ 366 (490)
T 3n71_A 312 TLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLY-VLRLLSIASEVLSYLQA 366 (490)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHHHHhcC
Confidence 33445557789999999999999998776521 11233 56778888888888774
No 184
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=40.26 E-value=46 Score=26.96 Aligned_cols=30 Identities=3% Similarity=-0.123 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhCCC-chhHHHHHHHHHhh
Q psy8176 102 ASDCFELGRQSYNTQD-FYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~d-y~~A~~Wl~~Al~~ 131 (159)
+.=.+.+|..+...++ |..|..+++.|+..
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l 161 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEE 161 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHH
Confidence 3345667777777775 77777777777754
No 185
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=39.07 E-value=41 Score=27.91 Aligned_cols=59 Identities=8% Similarity=0.044 Sum_probs=45.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCC-CCCCCHHHHHHHHHHhHhhc
Q psy8176 98 TQLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERN-GTSTPKWEILEYLAYSKFMQ 157 (159)
Q Consensus 98 ~~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~-~~~~~~~~il~~la~s~~~~ 157 (159)
.+.++.-.+.||..+.+.|+|..|..-++.|++.+...-. ..+. ..+++..|+.+..++
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~-~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSL-IEDLILLLEECDANI 426 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHH-HHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHH
Confidence 3467888999999999999999999999999998876322 1223 456777787776543
No 186
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=37.84 E-value=79 Score=24.00 Aligned_cols=50 Identities=14% Similarity=-0.088 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
++.=.+.+|..+...|+|..|...++.|+..-. + ..+++-.++.+....|
T Consensus 199 ~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p-------~-~~~~l~~l~~~~~~~g 248 (291)
T 3mkr_A 199 TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDS-------G-HPETLINLVVLSQHLG 248 (291)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T-CHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------C-CHHHHHHHHHHHHHcC
Confidence 455556799999999999999999999987532 2 3455556666655555
No 187
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=37.56 E-value=61 Score=27.78 Aligned_cols=64 Identities=14% Similarity=0.213 Sum_probs=31.2
Q ss_pred HHHHHHHhCCChHHhhc----cccCCcccCCC-----------CCHHHH-HHHHHHHHhCCCchhHHHHHHHHHhhhhcc
Q psy8176 72 LLRLQDTYKLETASVAR----GELNGVQYTTQ-----------LTASDC-FELGRQSYNTQDFYHTALWMGEALKRHDME 135 (159)
Q Consensus 72 l~RLQ~~Y~L~~~dla~----G~l~g~~~~~~-----------Ls~~DC-~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~ 135 (159)
|.||+..|+++...... |.+..++...+ ++..-| ..||..+--...+..|..|+..|.......
T Consensus 106 i~~l~~~y~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~ 185 (497)
T 1ya0_A 106 LQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN 185 (497)
T ss_dssp HHHHTC-------------------------------CCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB
T ss_pred HHHHHHHhCCChHhhhhhhhhccccccccccccccccchhHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34899999986443322 33333221110 122234 468888888889999999999999876653
No 188
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=36.49 E-value=67 Score=28.63 Aligned_cols=46 Identities=13% Similarity=-0.076 Sum_probs=21.8
Q ss_pred HHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 105 CFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 105 C~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
.+.+|..+.+.|+|..|...++.|++.- ++ ..+++-.|+.++.++|
T Consensus 114 ~~~Lg~~~~~~g~~~eAi~~~~~Al~l~-------P~-~~~a~~~L~~~l~~~g 159 (723)
T 4gyw_A 114 HSNLASIHKDSGNIPEAIASYRTALKLK-------PD-FPDAYCNLAHCLQIVC 159 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-------SC-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CC-ChHHHhhhhhHHHhcc
Confidence 3444555555555555555555554321 11 3345555555555544
No 189
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=36.26 E-value=44 Score=29.14 Aligned_cols=31 Identities=13% Similarity=0.017 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
++.=.+.+|..++..++|..|...++.|++.
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4666788999999999999999999999875
No 190
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=35.60 E-value=83 Score=23.70 Aligned_cols=52 Identities=8% Similarity=-0.166 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
++.--+.+|..+...|++..|...+..+++.-... . ..++...|+..+...|
T Consensus 218 ~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~-----~-~~~a~~~l~~~~~~~g 269 (287)
T 3qou_A 218 DAALATQLALQLHQVGRNEEALELLFGHLRXDLTA-----A-DGQTRXTFQEILAALG 269 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG-----G-GGHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc-----c-cchHHHHHHHHHHHcC
Confidence 46678999999999999999999999998763321 1 2445555555554444
No 191
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=34.72 E-value=42 Score=21.42 Aligned_cols=31 Identities=16% Similarity=0.172 Sum_probs=26.1
Q ss_pred CHHHHH-HHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 101 TASDCF-ELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC~-~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+..+|+ .+|..+++.|++..|..-++.|++.
T Consensus 44 ~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 44 DKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 344554 7999999999999999999999874
No 192
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=34.47 E-value=1.1e+02 Score=24.45 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhhcC
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFMQD 158 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~~g 158 (159)
..--+.+|..++..|++..|..|+...+..-+ ... ..+..-..+..+.++|
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~-----~~~-~lea~~l~vqi~L~~~ 150 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDE-----AEG-TTELLLLAIEVALLNN 150 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSC-----STT-HHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC-----CcC-cHHHHHHHHHHHHHCC
Confidence 44468999999999999999999998864211 123 4455555555555554
No 193
>2ixn_A Serine/threonine-protein phosphatase 2A activator; PP2A phosphatase activator prolyl isomerase PTPA, isomerase; 2.8A {Saccharomyces cerevisiae} SCOP: a.268.1.1
Probab=32.52 E-value=12 Score=30.53 Aligned_cols=24 Identities=25% Similarity=0.320 Sum_probs=18.0
Q ss_pred hhhHHHHH--------HHHHHHHHHhCCChHH
Q psy8176 62 DEDLSGAA--------TALLRLQDTYKLETAS 85 (159)
Q Consensus 62 ~~Dl~~A~--------~al~RLQ~~Y~L~~~d 85 (159)
.+|...++ .-+.|||.||.|+|+-
T Consensus 155 ~~D~~a~vL~vF~~Yl~l~R~Lq~tY~LEPAG 186 (310)
T 2ixn_A 155 SNDSTNLVLKVFIEYLKIMRILETKYWLEPAG 186 (310)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHTCEECC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHcccccCC
Confidence 56655543 5678999999999863
No 194
>2ixm_A Serine/threonine-protein phosphatase 2A regulatory subunit B'; 2 PTPA, ppiase, hydrolase activator; 1.5A {Homo sapiens} SCOP: a.268.1.1 PDB: 2hv6_A 2hv7_A* 2g62_A
Probab=32.32 E-value=12 Score=30.36 Aligned_cols=27 Identities=26% Similarity=0.388 Sum_probs=19.0
Q ss_pred CCChhhHHHHH--------HHHHHHHHHhCCChHH
Q psy8176 59 FPTDEDLSGAA--------TALLRLQDTYKLETAS 85 (159)
Q Consensus 59 ~P~~~Dl~~A~--------~al~RLQ~~Y~L~~~d 85 (159)
.=+.+|...++ .-+.|||.||.|+|+-
T Consensus 152 il~~~d~~a~vL~vF~~Yl~l~R~Lq~tY~LEPAG 186 (303)
T 2ixm_A 152 VLRVDDQIAIVFKVFNRYLEVMRKLQKTYRMEPAG 186 (303)
T ss_dssp SSCGGGHHHHHHTHHHHHHHHHHHHHHHTTCEESS
T ss_pred CCccchhhhhHHHHHHHHHHHHHHHHHhcccccCC
Confidence 33456655443 5578999999999863
No 195
>2ixo_A Serine/threonine-protein phosphatase 2A activator 1; isomerase, PP2A phosphatase activator prolyl isomerase PTPA, nuclear protein; 2.6A {Saccharomyces cerevisiae} SCOP: a.268.1.1 PDB: 2ixp_A*
Probab=30.61 E-value=14 Score=30.40 Aligned_cols=16 Identities=50% Similarity=0.542 Sum_probs=13.3
Q ss_pred HHHHHHHHHhCCChHH
Q psy8176 70 TALLRLQDTYKLETAS 85 (159)
Q Consensus 70 ~al~RLQ~~Y~L~~~d 85 (159)
.-+.|||.||.|+|+-
T Consensus 182 ~l~R~Lq~tY~LEPAG 197 (323)
T 2ixo_A 182 TIMRRLILTYTLEPAG 197 (323)
T ss_dssp HHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHcccccCC
Confidence 4478999999999863
No 196
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=30.18 E-value=52 Score=26.90 Aligned_cols=30 Identities=10% Similarity=-0.058 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHh----CCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQSYN----TQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~~y~----~~dy~~A~~Wl~~Al~ 130 (159)
++.-|+.||..+.+ .+|+..|..|++.|.+
T Consensus 317 ~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 317 EVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp CHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 46667778866655 3478888888887765
No 197
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=30.05 E-value=53 Score=26.91 Aligned_cols=34 Identities=18% Similarity=-0.034 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhc
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDM 134 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~ 134 (159)
.+.-||..|..+.+.+.|..|+.||+.|.+.++.
T Consensus 252 ~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~ 285 (376)
T 3r9m_A 252 TAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAK 285 (376)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 3778999999999999999999999999887763
No 198
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=29.54 E-value=1.6e+02 Score=21.15 Aligned_cols=33 Identities=9% Similarity=0.325 Sum_probs=27.3
Q ss_pred CCCHHHH-HHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 99 QLTASDC-FELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 99 ~Ls~~DC-~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
+..-.|| |.|+...|+.++|..|..-....|+.
T Consensus 73 ~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 73 ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp CSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred ccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3468888 46889999999999999988888753
No 199
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=28.23 E-value=46 Score=23.71 Aligned_cols=30 Identities=10% Similarity=0.363 Sum_probs=25.8
Q ss_pred HHHH-HHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 102 ASDC-FELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 102 ~~DC-~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
-.|| |.||...|+.|+|..|..+....|+.
T Consensus 77 ~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 77 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 6777 57889999999999999999988753
No 200
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=27.91 E-value=62 Score=26.46 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhc
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDM 134 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~ 134 (159)
..+.-||..|..+.+.+.|..|+.||+.|.+.+++
T Consensus 250 ~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 284 (363)
T 3rau_A 250 FAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNE 284 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999888765
No 201
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=27.48 E-value=63 Score=26.52 Aligned_cols=34 Identities=9% Similarity=0.020 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhc
Q psy8176 101 TASDCFELGRQSYNTQDFYHTALWMGEALKRHDM 134 (159)
Q Consensus 101 s~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~ 134 (159)
.+.-||..|..+.+.+.|..|+.|++.|.+.+..
T Consensus 274 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 307 (380)
T 3c3r_A 274 QANAEYHQSILAKQQKKFGEEIARLQHAAELIKT 307 (380)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 4667888999999999999999999999888765
No 202
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=27.14 E-value=93 Score=22.91 Aligned_cols=53 Identities=17% Similarity=0.112 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCCchhHHHHHHHHHhhhhccCCC--CCCCHHHHHHHHHHhHhhcCC
Q psy8176 106 FELGRQSYNTQDFYHTALWMGEALKRHDMERNG--TSTPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 106 ~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~--~~~~~~~il~~la~s~~~~g~ 159 (159)
++-.+.+++.+.|..|..=...++...+..... +.. +.+++-++|.++|..|+
T Consensus 24 ~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~-~~~~l~~ladalf~~~e 78 (167)
T 3ffl_A 24 IDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQ-KYQLLVYHADSLFHDKE 78 (167)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHH-HHHHHHHHHHHHHcccH
Confidence 566788999999999998777766554442221 123 67899999999999875
No 203
>3zwl_E Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=27.11 E-value=56 Score=19.30 Aligned_cols=19 Identities=11% Similarity=0.351 Sum_probs=15.1
Q ss_pred HHhhhhhHHHHHHHHHhhh
Q psy8176 24 VKRLTLDWKQAEHYMKDHV 42 (159)
Q Consensus 24 irRl~~dW~~~~~~~~~~~ 42 (159)
=|||-.+|..|....++..
T Consensus 17 RRrlLeEW~awRa~~~~~L 35 (50)
T 3zwl_E 17 QRELLKQWTEYREKIGQEM 35 (50)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3899999999988766544
No 204
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=27.05 E-value=54 Score=26.75 Aligned_cols=30 Identities=7% Similarity=0.036 Sum_probs=23.9
Q ss_pred CHHHHHHHHHH-H--HhCCCchhHHHHHHHHHh
Q psy8176 101 TASDCFELGRQ-S--YNTQDFYHTALWMGEALK 130 (159)
Q Consensus 101 s~~DC~~iG~~-~--y~~~dy~~A~~Wl~~Al~ 130 (159)
++.-|+.||.. . ...+++..|..|++.|.+
T Consensus 247 ~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~ 279 (452)
T 3e4b_A 247 YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRA 279 (452)
T ss_dssp STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 46778888887 3 467899999999988874
No 205
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=27.05 E-value=69 Score=24.37 Aligned_cols=26 Identities=4% Similarity=-0.133 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhCCCchhHHHHHHH
Q psy8176 102 ASDCFELGRQSYNTQDFYHTALWMGE 127 (159)
Q Consensus 102 ~~DC~~iG~~~y~~~dy~~A~~Wl~~ 127 (159)
+.=-+.+|..+...|++..|..++..
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~ 126 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ 126 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC
Confidence 33356777777777777777776654
No 206
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=26.98 E-value=68 Score=26.31 Aligned_cols=35 Identities=3% Similarity=0.004 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhc
Q psy8176 100 LTASDCFELGRQSYNTQDFYHTALWMGEALKRHDM 134 (159)
Q Consensus 100 Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~ 134 (159)
..+.-||..|..+.+.+.|..|+.|++.|.+.+..
T Consensus 255 ~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 289 (392)
T 1zb1_A 255 YKSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLIS 289 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 34667889999999999999999999999877765
No 207
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=26.57 E-value=55 Score=27.18 Aligned_cols=73 Identities=10% Similarity=-0.144 Sum_probs=50.4
Q ss_pred CChhhHHHHHHHHHHHHHHhCCChHHhhccccCCcccCCCCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCC
Q psy8176 60 PTDEDLSGAATALLRLQDTYKLETASVARGELNGVQYTTQLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDMERNGT 139 (159)
Q Consensus 60 P~~~Dl~~A~~al~RLQ~~Y~L~~~dla~G~l~g~~~~~~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~ 139 (159)
=...+.+.|...+.+.... +| -++.=.+.+|..++..++|..|...++.|++.-.
T Consensus 17 ~~~g~~~~A~~~~~~Al~~---~p----------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p------ 71 (477)
T 1wao_1 17 FKAKDYENAIKFYSQAIEL---NP----------------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDK------ 71 (477)
T ss_dssp TTTTCHHHHHHHHHHHHHH---CT----------------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCT------
T ss_pred HHhCCHHHHHHHHHHHHHh---CC----------------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC------
Confidence 3456777777777665443 11 1356678899999999999999999999987521
Q ss_pred CCCHHHHHHHHHHhHhhcCC
Q psy8176 140 STPKWEILEYLAYSKFMQDP 159 (159)
Q Consensus 140 ~~~~~~il~~la~s~~~~g~ 159 (159)
. ...++-.+|.+++++|+
T Consensus 72 -~-~~~~~~~lg~~~~~~g~ 89 (477)
T 1wao_1 72 -K-YIKGYYRRAASNMALGK 89 (477)
T ss_dssp -T-CHHHHHHHHHHHHHHTC
T ss_pred -C-CHHHHHHHHHHHHHcCC
Confidence 2 34566667777666653
No 208
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=25.52 E-value=1.7e+02 Score=20.35 Aligned_cols=61 Identities=15% Similarity=0.160 Sum_probs=33.9
Q ss_pred HHHhhhhhHHHHHHHHHhh-------hhHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHHHHhCCChHHhhc
Q psy8176 23 VVKRLTLDWKQAEHYMKDH-------VYQEAMDNMTRYKQDLKFPTDEDLSGAATALLRLQDTYKLETASVAR 88 (159)
Q Consensus 23 LirRl~~dW~~~~~~~~~~-------~~~~~i~~l~~~~~~~~~P~~~Dl~~A~~al~RLQ~~Y~L~~~dla~ 88 (159)
.++-+...|..+......+ ...+....+...... -+||+.|+..+-+=-.-|+|++.++++
T Consensus 42 ~l~~l~~~w~~l~~~~~~~s~~E~~~~~~EL~~~l~sie~d-----LeDLe~sI~ivE~np~kF~l~~~Ei~~ 109 (130)
T 4dnd_A 42 TARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWD-----LEDLEETIGIVEANPGKFKLPAGDLQE 109 (130)
T ss_dssp HHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHCHHHHCCCHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHhCHHhcCCCHHHHHH
Confidence 4555555665544332211 122334444444433 478888888887766778888888865
No 209
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=24.90 E-value=1.3e+02 Score=24.24 Aligned_cols=43 Identities=5% Similarity=-0.090 Sum_probs=23.4
Q ss_pred HHHHHHHHhCCCchhHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHhHhh
Q psy8176 106 FELGRQSYNTQDFYHTALWMGEALKRHDMERNGTSTPKWEILEYLAYSKFM 156 (159)
Q Consensus 106 ~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~~~~~~~~~~~~il~~la~s~~~ 156 (159)
+.+|..+...|+|..|...++.|++.- +. ...+..+++.++.+
T Consensus 204 ~~lg~~~~~~g~~~eAl~~~~~al~l~-------P~-~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 204 QHRQWVIQEFKLWDNELQYVDQLLKED-------VR-NNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHC-------TT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhC-------CC-CHHHHHHHHHHHHH
Confidence 345555555566666666666555431 12 34556666666665
No 210
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=24.74 E-value=77 Score=22.14 Aligned_cols=31 Identities=16% Similarity=0.321 Sum_probs=26.4
Q ss_pred CHHHH-HHHHHHHHhCCCchhHHHHHHHHHhh
Q psy8176 101 TASDC-FELGRQSYNTQDFYHTALWMGEALKR 131 (159)
Q Consensus 101 s~~DC-~~iG~~~y~~~dy~~A~~Wl~~Al~~ 131 (159)
.-.|| |.||-.+|+.|+|..|..-+...|+.
T Consensus 72 ~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 72 EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 36677 57899999999999999999888764
No 211
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.03 E-value=2.7e+02 Score=22.99 Aligned_cols=58 Identities=22% Similarity=0.152 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHHHH-HHhCCChHHhhccccCCcccCCCCCHHHHHHHHHHHHhCCCchhHHHHHHHHHhhhhc
Q psy8176 63 EDLSGAATALLRLQ-DTYKLETASVARGELNGVQYTTQLTASDCFELGRQSYNTQDFYHTALWMGEALKRHDM 134 (159)
Q Consensus 63 ~Dl~~A~~al~RLQ-~~Y~L~~~dla~G~l~g~~~~~~Ls~~DC~~iG~~~y~~~dy~~A~~Wl~~Al~~~~~ 134 (159)
.|+.+|+.-|..|| +||...... .-.+=++...+.++..+||.+|..-+..+......
T Consensus 151 g~~~eA~~iL~~l~~Et~~~~~~~--------------~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~ 209 (445)
T 4b4t_P 151 GKIDEAADILCELQVETYGSMEMS--------------EKIQFILEQMELSILKGDYSQATVLSRKILKKTFK 209 (445)
T ss_dssp TCHHHHHHHHHHHHHHHCSSSCHH--------------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcccHH--------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcc
Confidence 47788888888876 344332211 22455678899999999999999999887655444
No 212
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=20.33 E-value=62 Score=21.29 Aligned_cols=27 Identities=7% Similarity=0.064 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCCchhHHHHHHHHHhhh
Q psy8176 106 FELGRQSYNTQDFYHTALWMGEALKRH 132 (159)
Q Consensus 106 ~~iG~~~y~~~dy~~A~~Wl~~Al~~~ 132 (159)
|.-|..+|+.++|..|=+-+++.....
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~ 31 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKA 31 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhC
Confidence 567888999999999999888887654
No 213
>3vej_A Ubiquitin-like protein MDY2; alpha helical, dimerization, homodimerization, protein bindi; 1.23A {Saccharomyces cerevisiae}
Probab=20.18 E-value=65 Score=18.30 Aligned_cols=21 Identities=29% Similarity=0.485 Sum_probs=17.4
Q ss_pred hhhhchhHHH-HHHHhhhhhHH
Q psy8176 12 EYLANPINAF-LVVKRLTLDWK 32 (159)
Q Consensus 12 ~yl~nPlnaF-~LirRl~~dW~ 32 (159)
.-+.|+-.++ ..+.||...|.
T Consensus 17 ~~~~d~~~a~~~~L~RLqkGWe 38 (41)
T 3vej_A 17 NNFENDQAAVRQVMERLQKGWS 38 (41)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHhcChHHHHHHHHHHHHhccc
Confidence 3456888898 99999999996
Done!