BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8177
(312 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 298 bits (762), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 200/296 (67%), Gaps = 12/296 (4%)
Query: 2 IFPTHQRAQGNKLYYQEALNKSPELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLT-VPP 60
I P H RA+GN +Y++ L + D PP VN + ER+ YE LCRG++ V P
Sbjct: 235 IAPNHPRAKGNVKWYEDMLQGKDMVGDLPPIVNKRVEYDGIVERDAYEALCRGEIPPVEP 294
Query: 61 AIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRA 120
+L+C Y+ R+ P+L+L P+K E P +L+++V++DSEI++IK++A P+L+RA
Sbjct: 295 KWKNKLRC-YLKRDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRA 353
Query: 121 TVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIG 180
TVQN KTGELE A YRISKSAWL+ PVI+R++RR+E T L +T+EELQV NYG+G
Sbjct: 354 TVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLG 413
Query: 181 GHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAA 240
GHY+PH+DFAR E NAFK+L TGNR+ATVLFYMS +GGATVF L +++P K A
Sbjct: 414 GHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDAL 473
Query: 241 FWHNLHSSGDGDYYTRHAACPVLTG----SNS-LHS-----TCPCGLRRGLQRSGI 286
FW+NL G+GD TRHAACPVL G SN +H T PCGL +Q + I
Sbjct: 474 FWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIHEKGQEFTRPCGLEEEVQENFI 529
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 295 bits (754), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 192/275 (69%), Gaps = 13/275 (4%)
Query: 4 PTHQRAQGNKLYYQEALNKSPEL----------KDEPPKVNNVAPTLEVTEREKYEMLCR 53
P HQRA GN Y++ + K ++ + PK VA + ER+KYEMLCR
Sbjct: 236 PEHQRANGNLKYFEYIMAKEKDVNKSASDDQSDQKTTPKKKGVAVDY-LPERQKYEMLCR 294
Query: 54 GD-LTVPPAIVAQLKCRYVHRNV-PYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKK 111
G+ + + P +L CRY N P L P K+E+ + +PRII + D++ D+EI+++K
Sbjct: 295 GEGIKMTPRRQKKLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKD 354
Query: 112 MAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEE 171
+A+PRLRRAT+ N TG+LE +YRISKSAWL E+PV+ RI+ R++ +TGL STAEE
Sbjct: 355 LAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEE 414
Query: 172 LQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLS 231
LQV NYG+GG YEPH+DFAR E +AFK LGTGNR+AT LFYMSDV+ GGATVF + S
Sbjct: 415 LQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGAS 474
Query: 232 LWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
+WP+KGTA FW+NL +SG+GDY TRHAACPVL G+
Sbjct: 475 VWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGN 509
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 295 bits (754), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 192/275 (69%), Gaps = 13/275 (4%)
Query: 4 PTHQRAQGNKLYYQEALNKSPEL----------KDEPPKVNNVAPTLEVTEREKYEMLCR 53
P HQRA GN Y++ + K ++ + PK VA + ER+KYEMLCR
Sbjct: 236 PEHQRANGNLKYFEYIMAKEKDVNKSASDDQSDQKTTPKKKGVAVDY-LPERQKYEMLCR 294
Query: 54 GD-LTVPPAIVAQLKCRYVHRNV-PYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKK 111
G+ + + P +L CRY N P L P K+E+ + +PRII + D++ D+EI+++K
Sbjct: 295 GEGIKMTPRRQKKLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKD 354
Query: 112 MAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEE 171
+A+PRLRRAT+ N TG+LE +YRISKSAWL E+PV+ RI+ R++ +TGL STAEE
Sbjct: 355 LAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEE 414
Query: 172 LQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLS 231
LQV NYG+GG YEPH+DFAR E +AFK LGTGNR+AT LFYMSDV+ GGATVF + S
Sbjct: 415 LQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGAS 474
Query: 232 LWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
+WP+KGTA FW+NL +SG+GDY TRHAACPVL G+
Sbjct: 475 VWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGN 509
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 193/275 (70%), Gaps = 13/275 (4%)
Query: 4 PTHQRAQGNKLYYQEALNK--------SPELKDE--PPKVNNVAPTLEVTEREKYEMLCR 53
P HQRA GN +Y++ ++K S + D+ PK +A + ER+KYEMLCR
Sbjct: 236 PEHQRANGNLVYFEYIMSKEKDANKSASGDQSDQKTAPKKKGIAVDY-LPERQKYEMLCR 294
Query: 54 GD-LTVPPAIVAQLKCRYVHRNV-PYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKK 111
G+ + + P +L CRY N P L P K+E+ + +PRII + D++ D+EI+++K
Sbjct: 295 GEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKD 354
Query: 112 MAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEE 171
+A+PRLRRAT+ N TG LE +YRISKSAWL E PV+ RI+ R++ +TGL STAEE
Sbjct: 355 LAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEE 414
Query: 172 LQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLS 231
LQV NYG+GG YEPH+DFAR E +AF+ LGTGNR+AT LFYMSDV+ GGATVF + S
Sbjct: 415 LQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEVGAS 474
Query: 232 LWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
+WP+KGTA FW+NL +SG+GDY TRHAACPVL G+
Sbjct: 475 VWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGN 509
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/274 (52%), Positives = 191/274 (69%), Gaps = 11/274 (4%)
Query: 4 PTHQRAQGNKLYYQEALNK--------SPELKDEPPKVNNVAPTLE-VTEREKYEMLCRG 54
P HQRA GN Y++ + K S + D+ + ++ + ER+KYEMLCRG
Sbjct: 236 PEHQRANGNLKYFEYIMAKEKDANKSSSDDQSDQKTTLKKKGAAVDYLPERQKYEMLCRG 295
Query: 55 D-LTVPPAIVAQLKCRYVHRNV-PYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKM 112
+ + + P +L CRY N P L P K+E+ + +PRII + D++ D+EI+++K +
Sbjct: 296 EGIKMTPRRQKKLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEVVKDL 355
Query: 113 AQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEEL 172
A+PRLRRAT+ N TG+LE +YRISKSAWL E+PV+ RI+ R++ +TGL STAEEL
Sbjct: 356 AKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEEL 415
Query: 173 QVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSL 232
QV NYG+GG YEPH+DFAR E +AFK LGTGNR+AT LFYMSDV GGATVF + S+
Sbjct: 416 QVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFPEVGASV 475
Query: 233 WPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
WP+KGTA FW+NL +SG+GDY TRHAACPVL G+
Sbjct: 476 WPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGN 509
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/273 (53%), Positives = 191/273 (69%), Gaps = 11/273 (4%)
Query: 4 PTHQRAQGNKLYYQ-------EALNKSPELKDEPPKVNNVAPTLEVTEREKYEMLCRGD- 55
P HQRA GN Y++ EA S + +D+ K V + ER KYEMLCRG+
Sbjct: 220 PEHQRANGNMKYFEYIMAKEKEANKSSTDAEDQTDKETEVKKKDYLPERRKYEMLCRGEG 279
Query: 56 LTVPPAIVAQLKCRYV--HRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMA 113
L + P +L CRY +RN Y+ L P+K+E+ + +PRI+ + D++ D EI+ +K++A
Sbjct: 280 LKMTPRRQKRLFCRYYDGNRNPRYI-LGPVKQEDEWDKPRIVRFLDIISDEEIETVKELA 338
Query: 114 QPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQ 173
+PRL RATV + +TG+L A+YR+SKSAWL E PV+ RI+ R++ +TGL STAEELQ
Sbjct: 339 KPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQ 398
Query: 174 VVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLW 233
V NYG+GG YEPH+DF R E +AFK LGTGNR+AT LFYMSDV+ GGATVF + S+W
Sbjct: 399 VANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGASVW 458
Query: 234 PEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
P+KGTA FW+NL SG+GDY TRHAACPVL G+
Sbjct: 459 PKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGN 491
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/275 (52%), Positives = 193/275 (70%), Gaps = 13/275 (4%)
Query: 4 PTHQRAQGNKLYYQEALNK--------SPELKDEP--PKVNNVAPTLEVTEREKYEMLCR 53
P HQRA GN +Y++ ++K S + D+ PK +A + ER+KYEMLCR
Sbjct: 236 PEHQRANGNLVYFEYIMSKEKDANKSASGDQSDQKTTPKKKGIAVDY-LPERQKYEMLCR 294
Query: 54 GD-LTVPPAIVAQLKCRYVHRNV-PYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKK 111
G+ + + P +L CRY N P L P K+E+ + +PRII + D++ D+EI+++K
Sbjct: 295 GEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKD 354
Query: 112 MAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEE 171
+A+PRL RATV + +TG+L A YR+SKSAWL E PV+ RI+ R++ +TGL STAEE
Sbjct: 355 LAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEE 414
Query: 172 LQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLS 231
LQV NYG+GG YEPH+DFAR E +AF+ LGTGNR+AT LFYMSDV+ GGATVF + S
Sbjct: 415 LQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEVGAS 474
Query: 232 LWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
+WP+KGTA FW+NL +SG+GDY TRHAACPVL G+
Sbjct: 475 VWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGN 509
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 282 bits (721), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/272 (52%), Positives = 188/272 (69%), Gaps = 10/272 (3%)
Query: 4 PTHQRAQGNKLYYQEALNK------SPELKDEPPKVNNV--APTLEVTEREKYEMLCRGD 55
P+H+RA GN Y++ L + S + N+ PT + ER+ YE LCRG+
Sbjct: 240 PSHERAGGNLRYFERLLEEERGKSLSNQTDAGLATQENLYERPTDYLPERDVYESLCRGE 299
Query: 56 -LTVPPAIVAQLKCRYVHRN-VPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMA 113
+ + P +L CRY H N VP L + P KEE+ + P I+ Y DVM D EI+ IK++A
Sbjct: 300 GVKLTPRRQKKLFCRYHHGNRVPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIA 359
Query: 114 QPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQ 173
+P+L RATV++ KTG L +A+YR+SKS+WL E + PV+ R++RR++H+TGLT TAE LQ
Sbjct: 360 KPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQ 419
Query: 174 VVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLW 233
V NYG+GG YEPH+DF+R + +AFK LGTGNRVAT L YMSDV GGATVF L ++W
Sbjct: 420 VANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGAAIW 479
Query: 234 PEKGTAAFWHNLHSSGDGDYYTRHAACPVLTG 265
P+KGTA FW+NL SG+GDY TRHAACPVL G
Sbjct: 480 PKKGTAVFWYNLLRSGEGDYRTRHAACPVLVG 511
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 281 bits (718), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 141/272 (51%), Positives = 185/272 (68%), Gaps = 10/272 (3%)
Query: 4 PTHQRAQGNKLYYQE--------ALNKSPELKDEPPKVNNVAPTLEVTEREKYEMLCRGD 55
P+H+RA GN Y+++ L E + P+ P + ER+ YE LCRG+
Sbjct: 238 PSHERAGGNLRYFEQLLEEEREKTLTNQTEAELATPEGIYERPVDYLPERDVYESLCRGE 297
Query: 56 -LTVPPAIVAQLKCRYVHRN-VPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMA 113
+ + P +L CRY H N P L + P KEE+ + P I+ Y DVM D EI+ IK++A
Sbjct: 298 GVKLTPRRQKRLFCRYHHGNRAPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIA 357
Query: 114 QPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQ 173
+P+L RATV++ KTG L +A+YR+SKS+WL E + PV+ R++RR++H+TGLT TAE LQ
Sbjct: 358 KPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQ 417
Query: 174 VVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLW 233
V NYG+GG YEPH+DF+R E + FK LGTGNRVAT L YMSDV GGATVF L ++W
Sbjct: 418 VANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDLGAAIW 477
Query: 234 PEKGTAAFWHNLHSSGDGDYYTRHAACPVLTG 265
P+KGTA FW+NL SG+GDY TRHAACPVL G
Sbjct: 478 PKKGTAVFWYNLLRSGEGDYRTRHAACPVLVG 509
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 258 bits (658), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/292 (47%), Positives = 187/292 (64%), Gaps = 19/292 (6%)
Query: 4 PTHQRAQGNKLYY-----QEALNKSPELKDEPPKVNNVAP--TLEVTEREKYEMLCRGDL 56
PTH RA+GN +Y QE + +S K+ PP + N P L TER YE LCR ++
Sbjct: 235 PTHPRAKGNVKWYEDLLEQEGVRRSDMRKNLPP-IQNRRPDSVLGNTERTMYEALCRNEV 293
Query: 57 TVPPAIVAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPR 116
V +++L C Y R+ P+L P+K E P +L++DV+ D E+ I+++A+P+
Sbjct: 294 PVSQKDISRLYC-YYKRDRPFLVYAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPK 352
Query: 117 LRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVN 176
L RATV + TG+L A YRISKSAWL+E E V+E +++R+ +MT L TAEELQ+ N
Sbjct: 353 LARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIAN 412
Query: 177 YGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEK 236
YGIGGHY+PH+D A+ E+ +F+SLGTGNR+ATVLFYMS + GG TVFT ++ P K
Sbjct: 413 YGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKSTILPTK 472
Query: 237 GTAAFWHNLHSSGDGDYYTRHAACPVLTG----SNS-LHSTC-----PCGLR 278
A FW+NL+ GDG+ TRHAACPVL G SN +H PCGL+
Sbjct: 473 NDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEKGNEFRRPCGLK 524
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 179/276 (64%), Gaps = 21/276 (7%)
Query: 5 THQRAQGNKLYYQEALNKSPELKDEPPKVNNVAPTLEVT-------------EREKYEML 51
TH+RA N Y+++ L K + E P VA T V ER+ YE L
Sbjct: 239 THERAGSNLRYFEKLLEK----EREKPSNKTVATTEPVVQSGAYERPLDYLPERDIYEAL 294
Query: 52 CRGD-LTVPPAIVAQLKCRYVHRNV-PYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLI 109
CRG+ + + P +L CRY N P+L + P KEE+ + P I+ Y DVM D EI+ I
Sbjct: 295 CRGEGVKMTPRRQKRLFCRYHDGNRNPHLLIAPFKEEDEWDSPHIVRYYDVMSDEEIEKI 354
Query: 110 KKMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTA 169
K++A+P+L RATV++ KTG L +A+YR+SKS+WL E + PV+ ++++R++ +TGLT TA
Sbjct: 355 KQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTA 414
Query: 170 EELQVVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLN 229
E LQV NYG+GG YEPH+DF+R + KS GNR+AT L YMSDV GGATVF
Sbjct: 415 ELLQVANYGMGGQYEPHFDFSRRPFDSTLKS--EGNRLATFLNYMSDVEAGGATVFPDFG 472
Query: 230 LSLWPEKGTAAFWHNLHSSGDGDYYTRHAACPVLTG 265
++WP+KGTA FW+NL SG+GDY TRHAACPVL G
Sbjct: 473 AAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVG 508
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 158/273 (57%), Gaps = 19/273 (6%)
Query: 4 PTHQRAQGNKLYYQEALNKSP-----ELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLTV 58
P ++R N L Y++ L +SP E + P V P L+ R+ YE LC+ +
Sbjct: 258 PDNKRVARNVLKYEKLLAESPNQAVAETVMQRPNV----PHLQT--RDTYEGLCQTLGSQ 311
Query: 59 PPAI-VAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRL 117
P + L C Y + PYL L P+++E +L+P ++LY D + D+E I+ +A+P L
Sbjct: 312 PTHYRIPSLYCSYETSSSPYLLLQPVRKEVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWL 371
Query: 118 RRATVQNYKTGELEI-ANYRISKSAWLREPEHPVIERISRRVEHMTGLTTST--AEELQV 174
+R+ V +GE ++ YRISKSAWL++ PV+ + R+ +TGL AE LQV
Sbjct: 372 QRSVV---ASGEKQLPVEYRISKSAWLKDTVDPVLVTLDHRIAALTGLDVQPPYAEYLQV 428
Query: 175 VNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWP 234
VNYGIGGHYEPH+D A + ++ + +GNRVAT + Y+S V GGAT F N S+
Sbjct: 429 VNYGIGGHYEPHFDHATSPSSPLYR-MNSGNRVATFMIYLSSVEAGGATAFIYGNFSVPV 487
Query: 235 EKGTAAFWHNLHSSGDGDYYTRHAACPVLTGSN 267
K A FW NLH SG+GD T HAACPVL G
Sbjct: 488 VKNAALFWWNLHRSGEGDGDTLHAACPVLVGDK 520
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 154/270 (57%), Gaps = 13/270 (4%)
Query: 4 PTHQRAQGNKLYYQEALNKSPELKDEPPKVN--NVAPTLEVTEREKYEMLCRGDLTVPPA 61
P ++R N L Y+ L ++ L + NV P L+ R+ YE LC+ + P
Sbjct: 258 PDNKRMARNVLKYERLLAENGHLMAAETAIQRPNV-PHLQT--RDTYEGLCQTLGSQPTH 314
Query: 62 I-VAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRA 120
+ L C Y + PYL L P ++E +L+P + LY D + D E I+++A+P L+R+
Sbjct: 315 YQIPSLYCSYETNSSPYLLLQPARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRS 374
Query: 121 TVQNYKTGELEI-ANYRISKSAWLREPEHPVIERISRRVEHMTGLTTST--AEELQVVNY 177
V +GE ++ YRISKSAWL++ PV+ + RR+ +TGL AE LQVVNY
Sbjct: 375 VV---ASGEKQLQVEYRISKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNY 431
Query: 178 GIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKG 237
GIGGHYEPH+D A + +K + +GNR AT++ Y+S V GGAT F N S+ K
Sbjct: 432 GIGGHYEPHFDHATSPSSPLYK-MKSGNRAATLMIYLSSVEAGGATAFIYGNFSVPVVKN 490
Query: 238 TAAFWHNLHSSGDGDYYTRHAACPVLTGSN 267
A FW NLH SG+GD T HA CPVL G
Sbjct: 491 AALFWWNLHRSGEGDDDTLHAGCPVLVGDK 520
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 157/273 (57%), Gaps = 21/273 (7%)
Query: 4 PTHQRAQGNKLYYQEALNKSP-----ELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLTV 58
P ++R N L Y+ L +SP E + P + P L+ R+ YE LC+ L
Sbjct: 258 PDNKRMARNVLKYERLLAESPNHVVAEAVIQRPNI----PHLQT--RDTYEGLCQ-TLGS 310
Query: 59 PPAI--VAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPR 116
P + + L C Y + YL L P+++E +L+P I LY D + DSE I+++A+P
Sbjct: 311 QPTLYQIPSLYCSYETNSNAYLLLQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPW 370
Query: 117 LRRATVQNYKTGELEI-ANYRISKSAWLREPEHPVIERISRRVEHMTGLTTST--AEELQ 173
L+R+ V +GE ++ YRISKSAWL++ P + ++ R+ +TGL AE LQ
Sbjct: 371 LQRSVV---ASGEKQLQVEYRISKSAWLKDTVDPKLVTLNHRIAALTGLDVRPPYAEYLQ 427
Query: 174 VVNYGIGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLW 233
VVNYGIGGHYEPH+D A + ++ + +GNRVAT + Y+S V GGAT F NLS+
Sbjct: 428 VVNYGIGGHYEPHFDHATSPSSPLYR-MKSGNRVATFMIYLSSVEAGGATAFIYANLSVP 486
Query: 234 PEKGTAAFWHNLHSSGDGDYYTRHAACPVLTGS 266
+ A FW NLH SG+GD T HA CPVL G
Sbjct: 487 VVRNAALFWWNLHRSGEGDSDTLHAGCPVLVGD 519
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 152/269 (56%), Gaps = 11/269 (4%)
Query: 4 PTHQRAQGNKLYYQEALNKSP-ELKDEPPKVNNVAPTLEVTEREKYEMLCRGDLTVPPAI 62
P ++R N L Y+ L ++ ++ E P L+ R+ YE LC+ + P
Sbjct: 256 PDNKRMARNVLKYERLLAENGHQMAAETAIQRPNVPHLQT--RDTYEGLCQTLGSQPTHY 313
Query: 63 -VAQLKCRYVHRNVPYLRLMPLKEEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRAT 121
+ L C Y + PYL L P ++E +L+P I LY D + D E I+++A+P L+R+
Sbjct: 314 QIPSLYCSYETNSSPYLLLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSV 373
Query: 122 VQNYKTGELEI-ANYRISKSAWLREPEHPVIERISRRVEHMTGLTTST--AEELQVVNYG 178
V +GE ++ YRISKSAWL++ P++ + R+ +TGL AE LQVVNYG
Sbjct: 374 V---ASGEKQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYG 430
Query: 179 IGGHYEPHYDFARPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGT 238
IGGHYEPH+D A + ++ + +GNRVAT + Y+S V GGAT F N S+ K
Sbjct: 431 IGGHYEPHFDHATSPSSPLYR-MKSGNRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNA 489
Query: 239 AAFWHNLHSSGDGDYYTRHAACPVLTGSN 267
A FW NLH SG+GD T HA CPVL G
Sbjct: 490 ALFWWNLHRSGEGDGDTLHAGCPVLVGDK 518
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 136 RISKSAWLREPE--HPVIERISRRVEHMTGLT---TSTAEELQVVNYGIGGHYEPHYDFA 190
R S WL + E H V+ I +RV +T L+ +E LQVV YG GGHY H D
Sbjct: 274 RNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVEFSEPLQVVRYGEGGHYHAHVDSG 333
Query: 191 ----------RPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVF----------TSL-- 228
AN T R TVLFY+++V GG TVF SL
Sbjct: 334 PVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRTYDEMSLIQ 393
Query: 229 ---------------NLSLWPEKGTAAFWHNLHSSGDG-----DYYTRHAACPVLTGS 266
NL + P++GTA FW+N G G D Y+ H C V G+
Sbjct: 394 DDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHGGCLVTRGT 451
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 74/179 (41%), Gaps = 47/179 (26%)
Query: 136 RISKSAWLREPE--HPVIERISRRVEHMTGLT---TSTAEELQVVNYGIGGHYEPHYDFA 190
R S WL + E H ++ I +RV +T L+ +E LQVV YG GGHY H D
Sbjct: 273 RNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVDSG 332
Query: 191 ----------RPGEANAFKSLGTGNRVATVLFYMSDVAQGGATVF----------TSL-- 228
AN T R TVLFY+++V GG TVF SL
Sbjct: 333 PVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRTYDEMSLIQ 392
Query: 229 ---------------NLSLWPEKGTAAFWHNLHSSGDG-----DYYTRHAACPVLTGSN 267
NL + P++GTA FW+N G G D Y+ H C V G+
Sbjct: 393 DDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHGGCLVTRGTK 451
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 134 NYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAEELQVVNYGIGGHYEPHYDFA--R 191
N R S+ W+ + +P+++ I + + AE+LQVV Y +Y H+D
Sbjct: 95 NIRNSQQMWISK-NNPMVKPIFENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDS 153
Query: 192 PGEANAFKSLGTGNRVATVLFYMSDVAQGGATVFTSLNLSLWPEKGTAAFWHNLHSSGDG 251
+ + F G G R+ TVL Y+++ G T F +LN P+ G A ++ L ++ +
Sbjct: 154 SKQCSEFIERG-GQRILTVLIYLNNEFSDGHTYFPNLNQKFKPKTGDALVFYPLANNSNK 212
Query: 252 DY-YTRHAACPVLTG 265
+ Y+ HA PV +G
Sbjct: 213 CHPYSLHAGMPVTSG 227
>sp|Q52428|SYD_PYRKO Aspartate--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=aspS PE=1 SV=2
Length = 438
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 80 LMPLK--EEEAYLQPRIILYRDVMYDSEIDLIKKMAQPRLRRATVQNYKTGELEIANYRI 137
L P+K EE+A+L LY+ +M S +D + ++A + RA N T L A + I
Sbjct: 175 LFPMKYFEEDAFLAQSPQLYKQIMMASGLDRVYEIAP--IFRAEEHN-TTRHLNEA-WSI 230
Query: 138 SKSAWLREPEHPVIERISRRVEHMTG-LTTSTAEELQVVNYGIGGHYEPHYDFARPGEAN 196
E E V+ + R V H + A+EL ++N+ + EP F R
Sbjct: 231 DSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELE---EPKLPFPRVSYDK 287
Query: 197 AFKSLG 202
A + LG
Sbjct: 288 ALEILG 293
>sp|Q3V4Q4|Y892_ATV Putative VWFA domain-containing protein ORF892 OS=Acidianus
two-tailed virus PE=4 SV=1
Length = 892
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 98 RDVMYDS---EIDLIKKMAQPRLRRATVQNYKTGELEIANYRISKSA---WLREPEHPVI 151
RDV+ + E I++ Q R +RA Q KT E+AN R+S+SA R E
Sbjct: 94 RDVLAKAVQKEAQRIEEQLQRRPQRAKQQPQKTKTSEVANQRVSRSAENQGKRGNEEKQQ 153
Query: 152 ERISRRVEHMTGLTTSTAEE 171
++ + E +G + EE
Sbjct: 154 QKTPGKTEEASGAEQESGEE 173
>sp|B2TWF5|ARLY_SHIB3 Argininosuccinate lyase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=argH PE=3 SV=1
Length = 457
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 111 KMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAE 170
++ +PR + A Q Y E+A+Y ++K RE H V E + + L +
Sbjct: 350 QVKRPRCQEAAQQGYANAT-ELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLD 408
Query: 171 ELQVVNYGIGGHYEP 185
ELQ ++ IG P
Sbjct: 409 ELQKFSHVIGEDVYP 423
>sp|Q31U28|ARLY_SHIBS Argininosuccinate lyase OS=Shigella boydii serotype 4 (strain
Sb227) GN=argH PE=3 SV=1
Length = 457
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 111 KMAQPRLRRATVQNYKTGELEIANYRISKSAWLREPEHPVIERISRRVEHMTGLTTSTAE 170
++ +PR + A Q Y E+A+Y ++K RE H V E + + L +
Sbjct: 350 QVKRPRCQEAAQQGYANAT-ELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLD 408
Query: 171 ELQVVNYGIGGHYEP 185
ELQ ++ IG P
Sbjct: 409 ELQKFSHVIGEDVYP 423
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,727,893
Number of Sequences: 539616
Number of extensions: 5172111
Number of successful extensions: 11670
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 11603
Number of HSP's gapped (non-prelim): 37
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)