BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy818
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2TA03|UB2J2_BOVIN Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2
SV=1
Length = 259
Score = 266 bits (680), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 121/155 (78%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKRQLAAQSLVFNLKDKVFCELFPEVVEEI 167
>sp|Q8N2K1|UB2J2_HUMAN Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1
SV=3
Length = 259
Score = 265 bits (678), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 137/155 (88%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLA +SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEI 167
>sp|Q6P073|UB2J2_MOUSE Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1
SV=1
Length = 259
Score = 264 bits (674), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 138/155 (89%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 132
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ ++QLAA+SL FNL DK FCELFP++V+ I
Sbjct: 133 ETSDFTKKQLAAQSLVFNLKDKVFCELFPEVVEEI 167
>sp|P33296|UBC6_YEAST Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC6 PE=1 SV=1
Length = 250
Score = 194 bits (494), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 125/184 (67%), Gaps = 3/184 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M++K A RL ++Y + ++P PY++A PN NILEW Y++ GP +T Y+GG Y G L
Sbjct: 1 MATKQ--AHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTL 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
FP D+P+KPP+I MITPNGRFK NTRLCLSMSD+HPDTWNP WSVSTIL GLLSFM
Sbjct: 59 TFPSDYPYKPPAIRMITPNGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTSD 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFN-LNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDK 179
T GSI SD++++ LA S+ +N + F +FP++VQ L K ++ + +
Sbjct: 119 EATTGSITTSDHQKKTLARNSISYNTFQNVRFKLIFPEVVQENVETLEKRKLDEGDAANT 178
Query: 180 FDKS 183
D++
Sbjct: 179 GDET 182
>sp|Q6FQK7|UBC6_CANGA Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC6 PE=3 SV=1
Length = 246
Score = 189 bits (481), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 135/203 (66%), Gaps = 7/203 (3%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M++K A RL ++Y + ++P P++IA PN NILEW YV+ GP +T Y+GG Y G L
Sbjct: 1 MATKQ--AQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTL 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
FP D+P+KPP+I MITPNGRFK NTRLCLSMSD+HPDTWNP WSV+TIL GLLSFM
Sbjct: 59 TFPSDYPYKPPAIRMITPNGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMTGD 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFN-LNDKNFCELFPDLVQ-SISPGLVKSQIFKS-SLG 177
T GSI + E++ LA +S+ +N N F +FP++V+ +I+ + Q K S+
Sbjct: 119 ESTTGSITTTQQEKKILAKKSMYYNTFNSTRFKLVFPEIVEKNITELQRRKQEEKDMSMF 178
Query: 178 DKFDKSLYEA--HPCLQAEDIAN 198
+K + L +A ++ +DI N
Sbjct: 179 EKKEDPLVKAAREKAIEVKDIVN 201
>sp|Q9FK29|UBC33_ARATH Probable ubiquitin-conjugating enzyme E2 33 OS=Arabidopsis thaliana
GN=UBC33 PE=2 SV=1
Length = 243
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 116/163 (71%), Gaps = 2/163 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+ K C RL+++Y L K+P+ +V+A P+P +ILEW YV+ G E T + GG Y GK+
Sbjct: 1 MAEKAC--IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKI 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
FP ++P+KPP I M TPNGRF T ++CLSMSDFHP++WNP WSVS+ILTGLLSFM++
Sbjct: 59 KFPPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDN 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSIS 163
SPT GS+ S E+++LA SL FN F +LFP+ V+ S
Sbjct: 119 SPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYS 161
>sp|Q6CMG6|UBC6_KLULA Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=UBC6 PE=3 SV=1
Length = 251
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL ++Y + +P P++IA P+ NILEW YV+ GP +T YE G Y G L FP D+P
Sbjct: 6 ANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYP 65
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
F PP+I MITPNGRFK NTRLCLSMSD+HP+ WNPAWSV TIL GLLSFM T GS+
Sbjct: 66 FNPPAIRMITPNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMTGDEQTTGSV 125
Query: 128 EMSDYERRQLAARSLRFNL-NDKNFCELFPDLVQS 161
SD ++R LA +S FN ++ F +FPDL +S
Sbjct: 126 STSDKDKRTLAKKSKHFNTYSNFKFKNMFPDLRES 160
>sp|Q74Z34|UBC6_ASHGO Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC6
PE=3 SV=1
Length = 242
Score = 186 bits (473), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+S+ A RL ++Y + ++P PY++A P NIL W YV+ GP T YE G Y G L
Sbjct: 1 MASRQ--AYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTL 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
VFP D+PF PP+I M+TPNGRF+ NTRLCLSMSD+HPDTWNP+WSV+TILTGLLSFM
Sbjct: 59 VFPNDYPFNPPAIRMLTPNGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTD 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKN-FCELFPDLVQ 160
++G++E +D +R+ AA+S N FC++FP+L +
Sbjct: 119 ESSIGTMESTDSTKRKYAAKSKEHNATRSPIFCQIFPELAE 159
>sp|Q6BYG4|UBC6_DEBHA Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=UBC6 PE=3 SV=2
Length = 242
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
RL ++Y + +P PYV A+PN NILEW YV+ GP +T +E G Y G L FP ++PFKP
Sbjct: 9 RLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKP 68
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMS 130
PSI MITPNGRF NTRLCLSMSD+HPDTWNPAWSV+TILTGLLSFM T GSI S
Sbjct: 69 PSISMITPNGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMTGDESTTGSITTS 128
Query: 131 DYERRQLAARSLRF-NLNDKNFCELFPDLV 159
D +++LA S + N ++ F + FPDLV
Sbjct: 129 DNVKKRLARSSKEWNNAENQRFTKQFPDLV 158
>sp|Q9SHI7|UBC34_ARATH Ubiquitin-conjugating enzyme E2 34 OS=Arabidopsis thaliana GN=UBC34
PE=2 SV=1
Length = 237
Score = 184 bits (467), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 115/160 (71%), Gaps = 2/160 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+ K C RL+++Y L K+P+ +V+A P+P +ILEW YV+ G E T + GG Y GK+
Sbjct: 1 MAEKAC--IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKI 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
FP ++P+KPP I M TPNGRF T ++CLSMSDFHP++WNP WSVS+ILTGLLSFM++
Sbjct: 59 KFPPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDT 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQ 160
SPT GS+ + E+++LA SL FN F +LFP+ V+
Sbjct: 119 SPTTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVE 158
>sp|O42646|UBC6_SCHPO Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc6 PE=2 SV=1
Length = 227
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKL 60
M+SK GA RL ++Y+ L+K+P+ V A+P NILEW Y++ GP +T YEGG Y G L
Sbjct: 1 MASK--GAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTL 58
Query: 61 VFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER 120
+FP D+PFKPP+I MITP+GRF+TNTRLCLS SDFHP +WNP+W VSTIL GL+SFM
Sbjct: 59 IFPPDYPFKPPAIRMITPSGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFMTSD 118
Query: 121 SPTLGSIEMSDYERRQLAARSLRFNLNDK-NFCELFPDLV 159
T G I S+ RR A + RFN+ D F +FP+L+
Sbjct: 119 EITTGGIVTSESTRRTYAKDTKRFNIMDNPKFLIMFPELI 158
>sp|Q54LP7|UB2J2_DICDI Ubiquitin-conjugating enzyme E2 J2 OS=Dictyostelium discoideum
GN=ube2j2 PE=1 SV=1
Length = 241
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 112/161 (69%), Gaps = 4/161 (2%)
Query: 1 MSSKHCGATARLKQDYMKLKK--DPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLG 58
MS++ C RLK++ + L K D IA+P+ +NILEW YV+ GP +T Y GG Y G
Sbjct: 1 MSTQVC--VTRLKKELLALSKNEDIKDIFIAKPSISNILEWHYVIYGPPDTPYHGGYYHG 58
Query: 59 KLVFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMV 118
+++FP ++P+KPPSI M TP+GRF N+R+C SMSDFHPDTW+P WS TI+ GL+SFM
Sbjct: 59 QIIFPVEYPYKPPSILMTTPSGRFVCNSRICTSMSDFHPDTWSPFWSNCTIILGLISFMT 118
Query: 119 ERSPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLV 159
E GSI S R+QLA++S+ FNL + F +LFP+L+
Sbjct: 119 EDENGFGSIVKSKETRKQLASQSMAFNLKNPVFVKLFPELI 159
>sp|Q54AK6|UB2JL_DICDI Ubiquitin-conjugating enzyme E2 J2-like OS=Dictyostelium discoideum
GN=DDB_G0294380 PE=3 SV=1
Length = 170
Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 115/157 (73%), Gaps = 2/157 (1%)
Query: 3 SKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVF 62
+K C RLK+++ ++ K+PI ++ P+P+NILEW YV++G NT YEGG+Y G+L+F
Sbjct: 13 TKDC--ITRLKREFQEISKNPIENILVTPSPSNILEWHYVILGASNTPYEGGVYYGQLIF 70
Query: 63 PRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
++P PPSI M TP+GRF+T RLCLS+SD+HP++W+P+WS S+IL GLLSFM +
Sbjct: 71 KYNYPLSPPSILMTTPSGRFETQKRLCLSISDYHPESWSPSWSTSSILLGLLSFMSDNEV 130
Query: 123 TLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLV 159
T GSI ++ E+R LA +S+ FN +K FCELFP L
Sbjct: 131 TAGSIVTTNDEKRILATKSMDFNKKNKTFCELFPYLA 167
>sp|Q9LSP7|UBC32_ARATH Ubiquitin-conjugating enzyme E2 32 OS=Arabidopsis thaliana GN=UBC32
PE=2 SV=1
Length = 309
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R+ Q+ +++ +P ++ P NI EW + + GP +T++EGG+Y G++ P D+P
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYP 71
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM-VERSPTLGS 126
FKPPS ++TPNGRF+TNT++CLS+S++HP+ W P+WSV T L L++FM + LGS
Sbjct: 72 FKPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPNGALGS 131
Query: 127 IEMSDYERRQLAARS 141
++ ERR LA +S
Sbjct: 132 VDYPKDERRTLAIKS 146
>sp|Q9Y385|UB2J1_HUMAN Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1
SV=2
Length = 318
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL ++ +LK DP + A+P N+ EW + V GP ++ ++GG+Y G++V P ++P
Sbjct: 11 AVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYP 69
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM-VERSPTLGS 126
KPPSI ++T NGRF+ ++CLS+S HP+TW P+WS+ T L ++ FM + +GS
Sbjct: 70 MKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGS 129
Query: 127 IEMSDYERRQLAARSLRF 144
++ + ERR LA +S F
Sbjct: 130 LDYTPEERRALAKKSQDF 147
>sp|Q9JJZ4|UB2J1_MOUSE Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1
SV=2
Length = 318
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL ++ +LK DP + A+P N+ EW + V GP ++ ++GG+Y G++V P ++P
Sbjct: 11 AVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYP 69
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP-TLGS 126
KPPSI ++T NGRF+ ++CLS+S HP+TW P+WS+ T L ++ FM + +GS
Sbjct: 70 MKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGS 129
Query: 127 IEMSDYERRQLAARSLRF 144
++ + ERR LA +S F
Sbjct: 130 LDYTPEERRALAKKSQDF 147
>sp|Q5UQ57|UBC2_MIMIV Probable ubiquitin-conjugating enzyme E2 L709 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L709 PE=3 SV=1
Length = 388
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 31 PNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKPPSIYMITPNGRFKT------ 84
P + + +++ GPE T +EGG+Y G + D PF+PP+++MITP+GRF+
Sbjct: 29 PEEDDFYKVHFILQGPEGTPFEGGLYHGMIRLNNDHPFRPPNLHMITPSGRFEAEKYPIS 88
Query: 85 -NTR-LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE-RSPTLGSIEMSDYERRQLAARS 141
N+R +C + + FHP++W ++ T+L G +S M + +G+++ +D + ++LA S
Sbjct: 89 PNSRGICTTATSFHPESWTSMNNLETVLKGFVSLMCDPYDGGVGAVKSTDTQVKKLAQDS 148
Query: 142 LRFNLNDKNFCELFPDLVQSISPGLVK 168
L ND +LFPDL ++++ G K
Sbjct: 149 LTHIGNDLMVQKLFPDLYKAVNNGTFK 175
>sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana
GN=COP10 PE=1 SV=1
Length = 182
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 9/142 (6%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R++++ +L DP P A P N+ W +IGP T YEGG++ ++FP D+PFKP
Sbjct: 40 RIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKP 99
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS------PTL 124
P + T +T LS++ D+W+PA +++ +L + S ++ P +
Sbjct: 100 PKLVFKTRIYHCNVDTAGDLSVNILR-DSWSPALTITKVLQAIRSIFLKPEPYSPALPVI 158
Query: 125 GSIEMSDYERRQLAAR--SLRF 144
+ ++D E+ A+ +LRF
Sbjct: 159 ARLYLTDREKHDEVAKEWTLRF 180
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
++K + R++++ ++ DP P A P NI EW ++GP + YEGG++ +
Sbjct: 56 TAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDIT 115
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTR--LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
F D+PFKPP + T N++ +CL D D W+PA ++S +L + S + +
Sbjct: 116 FSSDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTD 172
Query: 120 RSPT---LGSI 127
+P +GSI
Sbjct: 173 CNPADPLVGSI 183
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
++K + R++++ ++ DP P A P NI EW ++GP + YEGG++ +
Sbjct: 56 TAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDIT 115
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTR--LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
F D+PFKPP + T N++ +CL D D W+PA ++S +L + S + +
Sbjct: 116 FSSDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTD 172
Query: 120 RSPT---LGSI 127
+P +GSI
Sbjct: 173 CNPADPLVGSI 183
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
++K + R++++ ++ DP P A P NI EW ++GP + YEGG++ +
Sbjct: 56 TAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDIT 115
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTR--LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
F D+PFKPP + T N++ +CL D D W+PA ++S +L + S + +
Sbjct: 116 FSSDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTD 172
Query: 120 RSPT---LGSI 127
+P +GSI
Sbjct: 173 CNPADPLVGSI 183
>sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana GN=UBC29
PE=2 SV=1
Length = 148
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT R+ ++ +L++DP A P ++ W ++GP + Y GG++L + FP D+P
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS-- 121
FKPP + T PN +N +CL D D W+PA ++S +L + S + + +
Sbjct: 62 FKPPKVVFRTKVFHPN--INSNGNICL---DILKDQWSPALTISKVLLSICSLLTDPNPD 116
Query: 122 ----PTLGSIEMSDYERRQLAARS 141
P + I +D + + ARS
Sbjct: 117 DPLVPEIAHIYKTDKTKYEAMARS 140
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
++K + R++++ ++ DP P A P NI EW ++GP + YEGG++ +
Sbjct: 50 AAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDIT 109
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTR--LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
F D+PFKPP + T N++ +CL D D W+PA ++S +L + S + +
Sbjct: 110 FSPDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTD 166
Query: 120 RSPT---LGSI 127
+P +GSI
Sbjct: 167 CNPADPLVGSI 177
>sp|Q6DG60|UBE2Z_DANRE Ubiquitin-conjugating enzyme E2 Z OS=Danio rerio GN=ube2z PE=2 SV=2
Length = 328
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 10/126 (7%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
+S+ C R+K+D M + K+P P + P+P ++ + ++ GP +T YEGG +L
Sbjct: 68 ASQQC--ILRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFR 125
Query: 62 FPRDFPFKPPSIYMITP-------NGRFKTNTRLCLS-MSDFHPDTWNPAWSVSTILTGL 113
P D+P PP + +IT N F N ++CLS + + W+PA S+S++L +
Sbjct: 126 CPPDYPIHPPRVKLITTGHNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISI 185
Query: 114 LSFMVE 119
S M E
Sbjct: 186 QSLMTE 191
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
++K + R++++ ++ DP P A P NI EW ++GP + YEGG++ +
Sbjct: 50 AAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDIT 109
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTR--LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
F D+PFKPP + T N++ +CL D D W+PA ++S +L + S + +
Sbjct: 110 FSPDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTD 166
Query: 120 RSPT---LGSI 127
+P +GSI
Sbjct: 167 CNPADPLVGSI 177
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R++++ L++DP + A P ++ W ++GP ++ Y+GG++ + FP D+P
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS-- 121
FKPP I T PN +N +CL D W+PA +VS +L + S + + +
Sbjct: 62 FKPPKIAFTTKIYHPN--INSNGSICL---DILRSQWSPALTVSKVLLSICSLLCDPNPD 116
Query: 122 ----PTLGSIEMSDYERRQLAAR 140
P + I SD E+ AR
Sbjct: 117 DPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R++++ L++DP + A P ++ W ++GP ++ Y+GG++ + FP D+P
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS-- 121
FKPP I T PN +N +CL D W+PA +VS +L + S + + +
Sbjct: 62 FKPPKIAFTTKIYHPN--INSNGSICL---DILRSQWSPALTVSKVLLSICSLLCDPNPD 116
Query: 122 ----PTLGSIEMSDYERRQLAAR 140
P + I SD E+ AR
Sbjct: 117 DPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R++++ L++DP + A P ++ W ++GP ++ Y+GG++ + FP D+P
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS-- 121
FKPP I T PN +N +CL D W+PA +VS +L + S + + +
Sbjct: 62 FKPPKIAFTTKIYHPN--INSNGSICL---DILRSQWSPALTVSKVLLSICSLLCDPNPD 116
Query: 122 ----PTLGSIEMSDYERRQLAAR 140
P + I SD E+ AR
Sbjct: 117 DPLVPDIAQIYKSDKEKYNRHAR 139
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R++++ L++DP + A P ++ W ++GP ++ Y+GG++ + FP D+P
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS-- 121
FKPP I T PN +N +CL D W+PA +VS +L + S + + +
Sbjct: 62 FKPPKIAFTTKIYHPN--INSNGSICL---DILRSQWSPALTVSKVLLSICSLLCDPNPD 116
Query: 122 ----PTLGSIEMSDYERRQLAAR 140
P + I SD E+ AR
Sbjct: 117 DPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R+ ++ L KDP A P ++ W ++GP ++ Y GG++ + FP D+P
Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS-- 121
FKPP + T PN +N +CL D D W+PA ++S +L + S + + +
Sbjct: 62 FKPPKVNFTTRIYHPN--INSNGSICL---DILRDQWSPALTISKVLLSICSLLTDPNPD 116
Query: 122 ----PTLGSIEMSDYERRQLAAR 140
P + + +D R +L+AR
Sbjct: 117 DPLVPEIAHVYKTDRSRYELSAR 139
>sp|Q7ZY08|UBE2T_XENLA Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2
SV=1
Length = 192
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 9 TARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPF 68
+RLK++ L K+P P VI N +N+ + +IG + YEGG++ +++ P +PF
Sbjct: 4 VSRLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPF 63
Query: 69 KPPSIYMITP--NGRFKTNTRLCLSMSDFHPD-TWNPAWSVSTILTGLLSFMVERSP 122
+PP I +TP + + R+CL + P W PA ++ST+LT + M E +P
Sbjct: 64 EPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNP 120
>sp|P52485|UBCD2_DROME Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster
GN=UbcD2 PE=2 SV=1
Length = 232
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 3 SKHCGATA-RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
S+ G +A R++++ ++ DP P A P N+ EW ++GP + YEGG++ +
Sbjct: 81 SRALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIH 140
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTR--LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
F ++PFKPP + T N++ +CL D D W+PA ++S +L + S + +
Sbjct: 141 FSPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTD 197
Query: 120 RSPT---LGSIEMSDYERRQLAARSLRF 144
+P +GSI + R+ R R
Sbjct: 198 CNPADPLVGSIATQYLQNREEHDRIARL 225
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica
GN=UBC5A PE=2 SV=1
Length = 147
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A+ R++++ L+KDP A P ++ W ++GP ++ Y GG++L + FP D+P
Sbjct: 2 ASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
FKPP + T PN +N +CL D D W+PA ++S +L + S + + +P
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICL---DILKDQWSPALTISKVLLSICSLLTDPNP 115
>sp|Q6FR76|UBC2_CANGA Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC2 PE=3 SV=1
Length = 167
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ ++K+D P V A P P N++ W ++IGP +T YE G + L F D+P
Sbjct: 5 ARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYP 64
Query: 68 FKPPSIY----MITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP + M PN N +CL D + W P + V++ILT + S + +P
Sbjct: 65 NKPPHVKFLSEMFHPN--VYANGEICL---DILQNRWTPTYDVASILTSIQSLFNDPNPA 119
>sp|Q6PCF7|UBE2Z_XENLA Ubiquitin-conjugating enzyme E2 Z OS=Xenopus laevis GN=ube2z PE=2
SV=2
Length = 313
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R+K+D M + K+P P + P+P ++ + ++ GP +T YEGG +L P D+P P
Sbjct: 62 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHP 121
Query: 71 PSIYMITP-------NGRFKTNTRLCLS-MSDFHPDTWNPAWSVSTILTGLLSFMVE 119
P + ++T N F N ++CLS + + W+PA S+S++L + S M E
Sbjct: 122 PRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTE 178
>sp|Q66KB0|UBE2Z_XENTR Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z
PE=2 SV=2
Length = 313
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R+K+D M + K+P P + P+P ++ + ++ GP +T YEGG +L P D+P P
Sbjct: 62 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHP 121
Query: 71 PSIYMITP-------NGRFKTNTRLCLS-MSDFHPDTWNPAWSVSTILTGLLSFMVE 119
P + ++T N F N ++CLS + + W+PA S+S++L + S M E
Sbjct: 122 PRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTE 178
>sp|O74201|UBC2_CANAL Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=UBC2 PE=2 SV=1
Length = 179
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ ++++DP V A P P N+++W V+IGP +T +E G + L F +P
Sbjct: 5 ARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYP 64
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
KPP + I+ PN + LCL D + W+P + VS+ILT + S +
Sbjct: 65 NKPPQVKFISEMFHPN--VYASGELCL---DILQNRWSPTYDVSSILTSVQSLL 113
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ +L++DP + P NI+ W V+ GP++T ++GG + L F D+P
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ ++ PN + +CL D + W+P + V+ ILT + S + + +P
Sbjct: 65 NKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
>sp|Q58FS2|UBC2_TRIHA Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2
PE=2 SV=1
Length = 151
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 6 CGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRD 65
A RL +D+ +++ DP V A P P N++ W V+IGP +T +E G + + F
Sbjct: 3 TAARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQ 62
Query: 66 FPFKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121
+P KPP + I+ PN N LCL D + W+P + V+ +LT + S +
Sbjct: 63 YPNKPPQVKFISQMFHPN--VYANGELCL---DILQNRWSPTYDVAAVLTSIQSLL--ND 115
Query: 122 PTLGS 126
P GS
Sbjct: 116 PNTGS 120
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ +L++DP + P NI+ W V+ GP++T ++GG + L F D+P
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ ++ PN + +CL D + W+P + V+ ILT + S + + +P
Sbjct: 65 NKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
>sp|Q8S919|UBC5B_ORYSJ Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica
GN=UBC5B PE=2 SV=1
Length = 148
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 15/144 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A+ R+ ++ L+KDP A P ++ W ++GP ++ Y GG++L + FP D+P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS-- 121
FKPP + + T PN +N +CL D + W+PA ++S +L + S + + +
Sbjct: 62 FKPPKVALKTKVFHPN--INSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 122 ----PTLGSIEMSDYERRQLAARS 141
P + + +D + + ARS
Sbjct: 117 DPLVPEIAHMYKTDRAKYESTARS 140
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
RL +D+ KL++DP V P NIL W ++ GP+ T +E G + L F ++P KP
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67
Query: 71 PSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
P++ I+ PN + +CL D + W+P + V+ ILT + S + E +P
Sbjct: 68 PTVKFISKMFHPN--VYADGSICL---DILQNRWSPTYDVAAILTSIQSLLDEPNPN 119
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2
SV=1
Length = 148
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A+ R+ ++ L+KDP A P ++ W ++GP ++ Y GG++L + FP D+P
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYP 61
Query: 68 FKPPSIYMIT----PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS-- 121
FKPP + T PN +N +CL D + W+PA ++S +L + S + + +
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPD 116
Query: 122 ----PTLGSIEMSDYERRQLAARS 141
P + + +D + + ARS
Sbjct: 117 DPLVPEIAHMYKTDRAKYETTARS 140
>sp|P52482|UB2E1_MOUSE Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2
SV=1
Length = 193
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ R++++ + DP P A P NI EW ++GP + YEGG++ + F ++P
Sbjct: 48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYP 107
Query: 68 FKPPSIYMITPNGRFKTNTR--LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT-- 123
FKPP + T N++ +CL D D W+PA ++S +L + S + + +P
Sbjct: 108 FKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTDCNPADP 164
Query: 124 -LGSIEMSDYERRQLAARSLR 143
+GSI R R R
Sbjct: 165 LVGSIATQYMTNRAEHDRMAR 185
>sp|P51965|UB2E1_HUMAN Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1
SV=1
Length = 193
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ R++++ + DP P A P NI EW ++GP + YEGG++ + F ++P
Sbjct: 48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYP 107
Query: 68 FKPPSIYMITPNGRFKTNTR--LCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT-- 123
FKPP + T N++ +CL D D W+PA ++S +L + S + + +P
Sbjct: 108 FKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTDCNPADP 164
Query: 124 -LGSIEMSDYERRQLAARSLR 143
+GSI R R R
Sbjct: 165 LVGSIATQYMTNRAEHDRMAR 185
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ +L++DP V P+ NI++W V+ GPE T +E G + + F ++P
Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYP 64
Query: 68 FKPPSIY----MITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ M PN + +CL D + W+P + VS+ILT + S + E +P
Sbjct: 65 NKPPTVRFLSKMFHPN--VYADGSICL---DILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ +L++DP V P+ NI++W V+ GPE T +E G + + F ++P
Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYP 64
Query: 68 FKPPSIY----MITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ M PN + +CL D + W+P + VS+ILT + S + E +P
Sbjct: 65 NKPPTVRFLSKMFHPN--VYADGSICL---DILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ +L++DP V P+ NI++W V+ GPE T +E G + + F ++P
Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYP 64
Query: 68 FKPPSIY----MITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ M PN + +CL D + W+P + VS+ILT + S + E +P
Sbjct: 65 NKPPTVRFLSKMFHPN--VYADGSICL---DILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ +L++DP V P+ NI++W V+ GPE T +E G + + F ++P
Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYP 64
Query: 68 FKPPSIY----MITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ M PN + +CL D + W+P + VS+ILT + S + E +P
Sbjct: 65 NKPPTVRFLSKMFHPN--VYADGSICL---DILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ +L++DP V P+ NI++W V+ GPE T +E G + + F ++P
Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYP 64
Query: 68 FKPPSIY----MITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ M PN + +CL D + W+P + VS+ILT + S + E +P
Sbjct: 65 NKPPTVRFLSKMFHPN--VYADGSICL---DILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,137,975
Number of Sequences: 539616
Number of extensions: 3268687
Number of successful extensions: 6652
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 6245
Number of HSP's gapped (non-prelim): 318
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)