RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy818
(214 letters)
>d2f4wa1 d.20.1.1 (A:12-168) Ubiquitin conjugating enzyme, UBC
{Human (Homo sapiens), E2 J2 [TaxId: 9606]}
Length = 157
Score = 161 bits (409), Expect = 2e-51
Identities = 120/155 (77%), Positives = 137/155 (88%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
AT RLKQDY+++KKDP+PY+ AEP P+NILEW YVV GPE T YEGG Y GKL+FPR+FP
Sbjct: 2 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 61
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSI 127
FKPPSIYMITPNGRFK NTRLCLS++DFHPDTWNPAWSVSTILTGLLSFMVE+ PTLGSI
Sbjct: 62 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 121
Query: 128 EMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSI 162
E SD+ +RQLA +SL FNL DK FCELFP++V+ I
Sbjct: 122 ETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEI 156
>d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 96.6 bits (240), Expect = 2e-26
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 1 MSSKHCGATARLKQDYMKLKKDPIPYVIAEPNPA--NILEWFYVVIGPENTQYEGGMYLG 58
M+S RL+++ + L+ DP P + +I +W + G T YEG +
Sbjct: 1 MAS----MQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQL 56
Query: 59 KLVFPRDFPFKPPSIYMITP----NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLL 114
F +PF P + + +N +CLS+ + W+PA SV ++ ++
Sbjct: 57 LFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILT---EDWSPALSVQSVCLSII 113
Query: 115 SFM 117
S +
Sbjct: 114 SML 116
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme,
E2 domain {Plasmodium chabaudi [TaxId: 5825]}
Length = 109
Score = 95.5 bits (237), Expect = 3e-26
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R++++ +P + +P NI W +G ENT Y +Y K++FP D+P KP
Sbjct: 2 RIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKP 61
Query: 71 PSIYMIT---PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
P +Y + + +N +CLS+ D +NP+ S+S ++ ++S +
Sbjct: 62 PIVYFLQKPPKHTHVYSNGDICLSLLG---DDYNPSLSISGLVLSIISML 108
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's
yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId:
4932]}
Length = 153
Score = 95.6 bits (237), Expect = 1e-25
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A RL +D+ ++K+D P V A P P N++ W ++IGP +T YE G + L F ++P
Sbjct: 4 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYP 63
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
KPP + ++ D + W P + V++ILT + S + +P
Sbjct: 64 NKPPHVKFLSEMFHPNVYAN-GEICLDILQNRWTPTYDVASILTSIQSLFNDPNP 117
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), E2 G1 [TaxId: 9606]}
Length = 125
Score = 94.7 bits (235), Expect = 1e-25
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 11 RLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFK 69
L++ +L K+P+ A + ++ W ++IGP +T YEGG++ L FP+D+P +
Sbjct: 3 LLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLR 62
Query: 70 PPSIYMITP--NGRFKTNTRLCLSM----------SDFHPDTWNPAWSVSTILTGLLSFM 117
PP + IT + N +C+S+ + + W P +V TI+ ++S +
Sbjct: 63 PPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISML 122
Query: 118 VE 119
+
Sbjct: 123 AD 124
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), E2 U [TaxId: 9606]}
Length = 148
Score = 93.6 bits (232), Expect = 5e-25
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 5 HCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPR 64
H A L +D+ LK++ + A+P +++EW + G +N+ ++G ++ + F
Sbjct: 2 HGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTS 61
Query: 65 DFPFKPPSIYMITPNGRFKTNTRLCLSMSDF--HPDTWNPAWSVSTILTGLLSFMVERSP 122
++ + PP + IT + DF +P+ WN +++S+IL L +
Sbjct: 62 EYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVL 121
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC
{Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
Length = 139
Score = 90.8 bits (225), Expect = 4e-24
Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
Query: 11 RLKQDYMKLKKDPIP----YVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
RL ++ + +K + + + + W ++IGP T YE +Y K+ +
Sbjct: 9 RLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKY 68
Query: 67 PFKPPSIYMITP--NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
P PP + +T ++ + + W ++S+ +L L M+
Sbjct: 69 PEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMS 123
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's
yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Length = 136
Score = 90.5 bits (224), Expect = 6e-24
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 11 RLKQDYMKLKKDPIP----YVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
RL ++ K +K P Y +A+ + + +W ++GP ++ +E +Y + ++
Sbjct: 8 RLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNY 67
Query: 67 PFKPPSIYMITPNGRFKTNTRLCLSMSDFH-PDTWNPAWSVSTILTGLLSFMVE 119
P PP + I+ N +DFH W A+++ T+L L M
Sbjct: 68 PDSPPKVTFISKINLPCVNPTTGEVQTDFHTLRDWKRAYTMETLLLDLRKEMAT 121
>d1y6la_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), ubch8 [TaxId: 9606]}
Length = 148
Score = 88.3 bits (218), Expect = 5e-23
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ R++++ ++ DP P A P NI EW ++GP + YEGG++ + F D+P
Sbjct: 3 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYP 62
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVER---SPTL 124
FKPP + T N++ + + D D W+PA ++S +L + S + + P +
Sbjct: 63 FKPPKVTFRTRIYHCNINSQGVICL-DILKDNWSPALTISKVLLSICSLLTDCNPADPLV 121
Query: 125 GSIEMSDYERRQLAARSLR 143
GSI R R R
Sbjct: 122 GSIATQYMTNRAEHDRMAR 140
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), ubc9 [TaxId: 9606]}
Length = 156
Score = 88.3 bits (218), Expect = 7e-23
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPA-----NILEWFYVVIGPENTQYEGGMYLGKLVF 62
A +RL Q+ +KD +A P N++ W + G + T +EGG++ +++F
Sbjct: 3 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLF 62
Query: 63 PRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDT-WNPAWSVSTILTGLLSFMVERS 121
D+P PP P +S+S D W PA ++ IL G+ + E +
Sbjct: 63 KDDYPSSPPKCKFEPPLFHPNVYPSGTVSLSILEEDKDWRPAITIKQILLGIQELLNEPN 122
Query: 122 P 122
Sbjct: 123 I 123
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode
(Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Length = 161
Score = 87.9 bits (217), Expect = 1e-22
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
++ LK+ +++ P+ A + +I +W +VIGP +T YEGG + L FPRD+
Sbjct: 1 SSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDY 60
Query: 67 PFKPPSIYMITPNGRFKTNTRLCLSMSDFHPD------------TWNPAWSVSTILTGLL 114
P KPP + I+ + + +S H W P +V TIL ++
Sbjct: 61 PQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVI 120
Query: 115 SFMVERSP 122
S + + +
Sbjct: 121 SMLTDPNF 128
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa,
E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Length = 154
Score = 87.2 bits (215), Expect = 2e-22
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 1 MSSKHCGATARLKQDYMKLKKDP---IPYVIAEPNPANILEWFYVVIGPENTQYEGGMYL 57
M++ A R+K+++ ++ K + + N E + GP +T YEGG Y
Sbjct: 1 MANI---AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQ 57
Query: 58 GKLVFPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
++ P +PF PP + IT ++ D D W A ++ T+L L + +
Sbjct: 58 LEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALL 117
Query: 118 VERSP 122
P
Sbjct: 118 AAAEP 122
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC
{Caenorhabditis elegans, E2 2 [TaxId: 6239]}
Length = 147
Score = 86.8 bits (214), Expect = 2e-22
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R++++ L +DP A P ++ W ++GP + Y+GG++ + FP D+P
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 68 FKPPSIYMITP--NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
FKPP + T + +N +CL + W+PA ++S +L + S + + +P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQ---WSPALTISKVLLSICSLLCDPNP 115
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's
yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Length = 149
Score = 86.4 bits (213), Expect = 3e-22
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAE-PNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
R+ ++ +K DP ++ E + ++I +GP T YEGG ++ + P ++
Sbjct: 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEY 61
Query: 67 PFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
PFKPP + T ++ D + W+P ++ + L L + + P
Sbjct: 62 PFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEP 117
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam
(Spisula solidissima), E-2C [TaxId: 6584]}
Length = 156
Score = 86.4 bits (213), Expect = 3e-22
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 2 SSKHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLV 61
S + + RL+Q+ L P + A P+ N+ +W + GP++T YE Y L
Sbjct: 4 SKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLE 63
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121
FP D+P+KPP + TP + D + W ++ V TIL L S + E +
Sbjct: 64 FPSDYPYKPPVVKFTTPCWHPNVDQSGN-ICLDILKENWTASYDVRTILLSLQSLLGEPN 122
Query: 122 P 122
Sbjct: 123 N 123
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC
{Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId:
6239]}
Length = 149
Score = 86.0 bits (212), Expect = 4e-22
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ RL +D+ KL++DP V P NIL W ++ GP+ T +E G + L F ++P
Sbjct: 4 SRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYP 63
Query: 68 FKPPSIYMITP--NGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
KPP++ I+ + + +CL + + W+P + V+ ILT + S + E +P
Sbjct: 64 NKPPTVKFISKMFHPNVYADGSICLDI---LQNRWSPTYDVAAILTSIQSLLDEPNPN 118
>d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's
yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]}
Length = 152
Score = 86.0 bits (212), Expect = 4e-22
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R+ ++ KL DP+P + AEP+ N+ + + GPE + YE G++ +L P D+P +
Sbjct: 7 RIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEA 66
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
P + +T + D W+PA + T+L + + + +P
Sbjct: 67 PKVRFLTKIYHPNIDRL-GRICLDVLKTNWSPALQIRTVLLSIQALLASPNP 117
>d1c4zd_ d.20.1.1 (D:) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), ubch7 [TaxId: 9606]}
Length = 144
Score = 85.2 bits (210), Expect = 6e-22
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 9 TARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ RL ++ +++K + + AN+L W +I P+N Y+ G + ++ FP ++P
Sbjct: 1 SRRLMKELEEIRKCGMKNFRNIQVDEANLLTW-QGLIVPDNPPYDKGAFRIEINFPAEYP 59
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
FKPP I T + + + + + W PA ++ L++ + + P
Sbjct: 60 FKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPE 115
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), E2 T [TaxId: 9606]}
Length = 154
Score = 85.3 bits (210), Expect = 9e-22
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+RLK++ L +P P + + + + ++G NT YE G++ +++ P +P
Sbjct: 3 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYP 62
Query: 68 FKPPSIYMITP--NGRFKTNTRLCLSMSDFHP-DTWNPAWSVSTILTGLLSFMVERSP 122
F+PP I +TP + + R+CL + P W P+ +++T+LT + M E +P
Sbjct: 63 FEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNP 120
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), ubc13 [TaxId: 9606]}
Length = 149
Score = 82.1 bits (202), Expect = 1e-20
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 7 GATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
G R+ ++ +L +P+P + AEP+ +N + V+ GP+++ +EGG + +L P ++
Sbjct: 2 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEY 61
Query: 67 PFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
P P + +T + + + D D W+PA + T+L + + + +P
Sbjct: 62 PMAAPKVRFMTKIYHPNVDKLGRICL-DILKDKWSPALQIRTVLLSIQALLSAPNP 116
>d1wzva1 d.20.1.1 (A:2-151) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), E2 L6 [TaxId: 9606]}
Length = 150
Score = 82.1 bits (202), Expect = 1e-20
Identities = 22/115 (19%), Positives = 47/115 (40%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A+ R+ ++ L+K P PY+ + + ++ ++ P+ Y + ++ FP ++P
Sbjct: 1 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYP 60
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
FKPP I T + + + + W P +L L + +
Sbjct: 61 FKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNI 115
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC
{Human(Homo sapiens), E2 S [TaxId: 9606]}
Length = 151
Score = 81.3 bits (200), Expect = 2e-20
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
+ ++ L DP + PN ++ + + GPE T Y GG++ KL+ +DFP P
Sbjct: 10 LVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASP 69
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
P Y +T + ++ D W + +L + ++ +P
Sbjct: 70 PKGYFLTKIFHPNVGANGEICVNVLKRD-WTAELGIRHVLLTIKCLLIHPNP 120
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721,
E2 domain {Toxoplasma gondii [TaxId: 5811]}
Length = 161
Score = 81.0 bits (199), Expect = 4e-20
Identities = 27/113 (23%), Positives = 46/113 (40%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R V A+ +I W + GP T YEGG + +V P D+P+ P
Sbjct: 18 RAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNP 77
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPT 123
P + +T +++ D W+PA ++ T L + + + + PT
Sbjct: 78 PKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPT 130
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human
(Homo sapiens), ubch10 [TaxId: 9606]}
Length = 146
Score = 80.2 bits (197), Expect = 5e-20
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
RL+Q+ M L + A P N+ +W + G T YE Y L FP +P
Sbjct: 2 VGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 61
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
+ P++ +TP +T+ +S+ D + W+ + V TIL + S + E +
Sbjct: 62 YNAPTVKFLTPCYHPNVDTQGNISL-DILKEKWSALYDVRTILLSIQSLLGEPNI 115
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's
yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Length = 164
Score = 80.6 bits (198), Expect = 7e-20
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEP-NPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDF 66
A RL ++ +L KD P ++A P + NI W ++ GP +T Y G++ KL FP+D+
Sbjct: 4 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDY 63
Query: 67 PFKPPSIYMITP--NGRFKTNTRLCLSM----------SDFHPDTWNPAWSVSTILTGLL 114
P PP + + N +C+S+ + + W+P SV IL ++
Sbjct: 64 PLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVM 123
Query: 115 SFMVERSP 122
S + E +
Sbjct: 124 SMLSEPNI 131
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC
{Human (Homo sapiens), E2 H [TaxId: 9606]}
Length = 152
Score = 75.9 bits (186), Expect = 3e-18
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 11 RLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFPFKP 70
R+ D +KL + + E+ GP+ T YEGG++ ++ P +PFK
Sbjct: 7 RMDTDVVKLIESKHE----VTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKS 62
Query: 71 PSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFM 117
PSI + + D TW + ++ I L +
Sbjct: 63 PSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQL 109
>d1y8xa1 d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, UBC
{Human (Homo sapiens), E2 M [TaxId: 9606]}
Length = 157
Score = 74.3 bits (182), Expect = 1e-17
Identities = 24/117 (20%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
A R+++D +L + +P ++L + +VI P+ Y+ G ++ + +P
Sbjct: 4 AQLRIQKDINELNLPKTCDISF-SDPDDLLNF-KLVICPDEGFYKSGKFVFSFKVGQGYP 61
Query: 68 FKPPSIYMIT--PNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSP 122
PP + T + +CL++ + W P ++++I+ GL +E +P
Sbjct: 62 HDPPKVKCETMVYHPNIDLEGNVCLNI---LREDWKPVLTINSIIYGLQYLFLEPNP 115
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC
{Leishmania major [TaxId: 5664]}
Length = 158
Score = 74.0 bits (181), Expect = 2e-17
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 8 ATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLGKLVFPRDFP 67
+ R + DYM+L P+ + E++ GPE T YE G ++ + P D+P
Sbjct: 1 SNRRREMDYMRLCNSTR---KVYPSD-TVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYP 56
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVE 119
FK PSI + R D TW P + + I L ++
Sbjct: 57 FKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLR 108
>d1s1qa_ d.20.1.2 (A:) Tumor susceptibility gene 101 (TSG101) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 141
Score = 72.7 bits (178), Expect = 3e-17
Identities = 22/125 (17%), Positives = 42/125 (33%), Gaps = 6/125 (4%)
Query: 4 KHCGATARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLG--KLV 61
K+ T R + + L KD P + + + G Y G Y L
Sbjct: 14 KYRDLTVRETVNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIPVPYRGNTYNIPICLW 73
Query: 62 FPRDFPFKPPSIYMI-TPNGRFKTNTRLCLSMSDFHP--DTWNPAWS-VSTILTGLLSFM 117
+P+ PP ++ T + KT + + + P W S + ++ ++
Sbjct: 74 LLDTYPYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVF 133
Query: 118 VERSP 122
+ P
Sbjct: 134 GDEPP 138
>d1zuoa1 d.20.1.1 (A:201-362) Ubiquitin-conjugating enzyme E2 Q2,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 162
Score = 73.0 bits (178), Expect = 5e-17
Identities = 19/135 (14%), Positives = 46/135 (34%), Gaps = 16/135 (11%)
Query: 8 ATARLKQDYMKLKKDPIPYV---IAEPNPANILEWFYVVIG-PENTQYEGGM-------- 55
A+ RL ++ + + E ++ +W + ++ +
Sbjct: 5 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEG 64
Query: 56 ---YLGKLVFPRDFPFKPPSIYMITPNGRF-KTNTRLCLSMSDFHPDTWNPAWSVSTILT 111
L F +FPF PP + ++ P L M W+ A+S+ +++
Sbjct: 65 IEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIM 124
Query: 112 GLLSFMVERSPTLGS 126
+ + +V+ +
Sbjct: 125 QINATLVKGKARVQF 139
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 40.7 bits (95), Expect = 5e-05
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDK--SLYEAHPCLQAEDIANTVEFILSSPPHV 210
ISPG+V++Q +K + YE CL+ ED+A V ++LS+P H+
Sbjct: 192 ATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHI 245
>d1uzxa_ d.20.1.2 (A:) Vacuolar protein sorting-associated {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 152
Score = 38.8 bits (90), Expect = 1e-04
Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 23/127 (18%)
Query: 9 TARLKQDYMKLKKDPIPYVIAEPNPANILEWFYVVIGPENTQYEGGMYLG---KLVFPRD 65
+ L ++ L+ + ++ P +L + G +T +G + P
Sbjct: 28 SLALLDNFHSLRPRTRVFTHSDGTPQLLLSIY----GTISTGEDGSSPHSIPVIMWVPSM 83
Query: 66 FPFKPPSIYMITPNGRFKT-------------NTRLCLSMSDFHPDTWNPAWSVSTILTG 112
+P KPP I + N T N + L + A ++ ++
Sbjct: 84 YPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILH---CWDPAAMNLIMVVQE 140
Query: 113 LLSFMVE 119
L+S + E
Sbjct: 141 LMSLLHE 147
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 38.9 bits (90), Expect = 2e-04
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V I+PG + + KS + + ++ + + P Q +DIAN F+ S
Sbjct: 184 VNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCS 233
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase
{Chlorobium tepidum [TaxId: 1097]}
Length = 240
Score = 37.4 bits (86), Expect = 6e-04
Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQV 212
+ + PG V + ++ + D+ + + EDIA V P V
Sbjct: 182 ITDVQPGAVYTPMWGK-VDDEMQALM------MMPEDIAAPVVQAYLQPSRTVV 228
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase
{Comamonas testosteroni [TaxId: 285]}
Length = 253
Score = 37.3 bits (86), Expect = 6e-04
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL-------QAEDIANTVEFILS 205
V SI P + + + ++SL K + P L E IA V F+ S
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS 231
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 259
Score = 36.5 bits (84), Expect = 0.001
Identities = 8/50 (16%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
+++P ++ + + ++ D+F K + P + E++++ V F+
Sbjct: 183 ANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 232
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 264
Score = 36.5 bits (84), Expect = 0.001
Identities = 21/133 (15%), Positives = 38/133 (28%), Gaps = 26/133 (19%)
Query: 86 TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMSDYERRQLAARSLRFN 145
T+ + S+++ L F + + L +R N
Sbjct: 128 TKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVN 187
Query: 146 LNDKNFCELFPDLVQSISPGLVKSQIFKS-SLGDKFDKSLYEAHPCL----------QAE 194
SISPGLV + + + ++ K Y + Q +
Sbjct: 188 ---------------SISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ 232
Query: 195 DIANTVEFILSSP 207
DIA + F+
Sbjct: 233 DIAEVIAFLADRK 245
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase
{Lactobacillus brevis [TaxId: 1580]}
Length = 251
Score = 36.5 bits (84), Expect = 0.001
Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPC---LQAEDIANTVEFILS 205
V ++ PG +K+ + G + S P + DIA ++ S
Sbjct: 182 VNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase
{Azoarcus sp. ebn1 [TaxId: 76114]}
Length = 247
Score = 36.4 bits (84), Expect = 0.001
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----QAEDIANTVEFILS 205
V +I+P LV++ ++S L + D+ F+ S
Sbjct: 177 VNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS 227
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase
{Streptomyces hydrogenans [TaxId: 1905]}
Length = 254
Score = 35.7 bits (82), Expect = 0.002
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP----CLQAEDIANTVEFILS 205
V S+ PG+ + + G + + Y P + +IA V +LS
Sbjct: 176 VNSVHPGMTYTPMTAE-TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLS 225
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial
(DECR) {Human (Homo sapiens), [TaxId: 9606]}
Length = 294
Score = 35.5 bits (81), Expect = 0.003
Identities = 30/149 (20%), Positives = 46/149 (30%), Gaps = 20/149 (13%)
Query: 62 FPRDFPFKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERS 121
R P +I I NG + + + + TG + S
Sbjct: 119 TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS 178
Query: 122 PTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD--K 179
G MS + +RFN I PG +K++ S L
Sbjct: 179 AKAGVEAMSKSLAAEWGKYGMRFN---------------VIQPGPIKTKGAFSRLDPTGT 223
Query: 180 FDKSLYEAHPC---LQAEDIANTVEFILS 205
F+K + PC E++AN F+ S
Sbjct: 224 FEKEMIGRIPCGRLGTVEELANLAAFLCS 252
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 35.1 bits (80), Expect = 0.003
Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 139 ARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----QAE 194
+L K V +I PG + + I D ++ E+ + + E
Sbjct: 169 TETLALEYAPKGIR------VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE 222
Query: 195 DIANTVEFILS 205
+IA ++ S
Sbjct: 223 EIAAVAAWLAS 233
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 244
Score = 35.0 bits (80), Expect = 0.003
Identities = 10/51 (19%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----QAEDIANTVEFILS 205
V +++P +V + + +++ D L + E + N + F+LS
Sbjct: 174 VNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLS 224
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase,
PGDH {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 35.0 bits (80), Expect = 0.004
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 10/59 (16%)
Query: 159 VQSISPGLVKSQIFKSSLGD-------KFDKSLYEAHP---CLQAEDIANTVEFILSSP 207
+ +I PG V + I +S + ++ + + L IAN + ++
Sbjct: 176 LNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD 234
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 242
Score = 34.6 bits (79), Expect = 0.005
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 19/81 (23%)
Query: 129 MSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD-KFDKSLYEA 187
++ +L +R N S++P +V + + K D +F + L E
Sbjct: 157 LTKAMAMELGPHKIRVN---------------SVNPTVVLTDMGKKVSADPEFARKLKER 201
Query: 188 HP---CLQAEDIANTVEFILS 205
HP + ED+ N++ F+LS
Sbjct: 202 HPLRKFAEVEDVVNSILFLLS 222
>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 34.9 bits (79), Expect = 0.005
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 160 QSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----QAEDIANTVEFILSSP 207
+I+PGL + + S L +K L P + A+ V+ I+ +P
Sbjct: 189 MTIAPGLFGTPLLTS-LPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENP 239
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 251
Score = 34.6 bits (79), Expect = 0.006
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----QAEDIANTVEFILS 205
V I+PG ++++ ++ D L ED+ F+ S
Sbjct: 181 VNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLAS 231
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus
thermophilus [TaxId: 274]}
Length = 248
Score = 33.7 bits (77), Expect = 0.010
Identities = 9/55 (16%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 159 VQSISPGLVKSQIFKSSLG-----DKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V +++PG + ++ ++ ++ + + H + E++A V F+ S
Sbjct: 173 VNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS 227
>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 259
Score = 33.6 bits (76), Expect = 0.011
Identities = 8/59 (13%), Positives = 17/59 (28%), Gaps = 7/59 (11%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEA-------HPCLQAEDIANTVEFILSSPPHV 210
V S +PG + + + + + D L + A + +L
Sbjct: 192 VLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQ 250
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermus thermophilus [TaxId: 274]}
Length = 242
Score = 33.5 bits (76), Expect = 0.013
Identities = 10/50 (20%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V +++PG +++++ + +K + A P + ++A F+LS
Sbjct: 173 VNTLAPGFIETRMTAK-VPEKVREKAIAATPLGRAGKPLEVAYAALFLLS 221
>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 241
Score = 33.2 bits (75), Expect = 0.014
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 20/87 (22%)
Query: 125 GSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSL 184
G + ++ R+LA +R +++PGL + + + L +K SL
Sbjct: 153 GVVALTLPAARELAGWGIRVV---------------TVAPGLFDTPLLQG-LPEKAKASL 196
Query: 185 YEAHPCL----QAEDIANTVEFILSSP 207
P + E+ A V IL +P
Sbjct: 197 AAQVPFPPRLGRPEEYAALVLHILENP 223
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum
[TaxId: 144185]}
Length = 258
Score = 33.2 bits (75), Expect = 0.015
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 16/76 (21%)
Query: 140 RSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD-------KFDKSLYEAHP--- 189
R+ + +I+PG + + + ++S+ K + + +P
Sbjct: 168 RNSAVEYGRYGIR------INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKR 221
Query: 190 CLQAEDIANTVEFILS 205
+A +IA V F+LS
Sbjct: 222 YGEAPEIAAVVAFLLS 237
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura
stramonium), II [TaxId: 4076]}
Length = 259
Score = 33.1 bits (75), Expect = 0.016
Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Query: 159 VQSISPGLVKSQIFKSSLGD----KFDKSLYEAHP---CLQAEDIANTVEFILS 205
V + PG++ + + + ++ D + L + + +++A V F+
Sbjct: 183 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF 236
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 297
Score = 33.1 bits (75), Expect = 0.017
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 159 VQSISPGLVKSQIFKSSLG---DKFDKSLYEAHP---CLQAEDIANTVEFILS 205
+ ++PG++ SQ + G F + ++ P E++++ V F+LS
Sbjct: 190 INCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLS 242
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 234
Score = 33.1 bits (75), Expect = 0.018
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V ++PG +++ K L ++ K + P + E+IA+ V F+ S
Sbjct: 163 VNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCS 212
>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase
{Thermus thermophilus, TTHB020 [TaxId: 274]}
Length = 241
Score = 32.8 bits (74), Expect = 0.019
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V + PGL+++ + L + A P + E++A F+LS
Sbjct: 173 VNVLLPGLIQTPMTAG-LPPWAWEQEVGASPLGRAGRPEEVAQAALFLLS 221
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 31.8 bits (72), Expect = 0.042
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 8/55 (14%)
Query: 159 VQSISPGLVKSQIFKSSLG-----DKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V ISPG + + +++ + A P Q ++ F+ S
Sbjct: 176 VNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS 230
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol
dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId:
35933]}
Length = 268
Score = 31.6 bits (71), Expect = 0.050
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 159 VQSISPGLVKSQIFKSSLG---DKFDKSLYEAHPCL----QAEDIANTVEFILS 205
V +SP +V S + G + ++ ++A +AED+A+ V ++
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAG 235
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 274
Score = 31.5 bits (71), Expect = 0.059
Identities = 18/80 (22%), Positives = 26/80 (32%), Gaps = 17/80 (21%)
Query: 139 ARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD--------KFDKSLYEAHP- 189
R +L V S+SPG V + + F S E P
Sbjct: 169 TRCTAIDLIQHGVR------VNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV 222
Query: 190 --CLQAEDIANTVEFILSSP 207
C + E+IAN + F+
Sbjct: 223 GHCGKPEEIANIIVFLADRN 242
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 244
Score = 31.2 bits (70), Expect = 0.061
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
Query: 139 ARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIAN 198
+S L V SI PGLVK+ + D F +L A + +++N
Sbjct: 163 TKSTALELGPSGIR------VNSIHPGLVKTPMTDWVPEDIFQTALGRA---AEPVEVSN 213
Query: 199 TVEFILS 205
V ++ S
Sbjct: 214 LVVYLAS 220
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 237
Score = 31.2 bits (70), Expect = 0.062
Identities = 8/48 (16%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 161 SISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
++PG + + + ++ L ++ + + P ++A V F+ S
Sbjct: 172 VVAPGYIDTDMTRA-LDERIQQGALQFIPAKRVGTPAEVAGVVSFLAS 218
>d2j88h1 b.1.1.2 (H:113-180) Immunoglobulin heavy chain gamma
constant domain 1, CH1-gamma {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 68
Score = 29.4 bits (66), Expect = 0.070
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 69 KPPSIYMITPNGRFKTN---TRLCLSMSDFHPDTWNPAWSVSTILTGLLSF 116
PPS+Y + P +TN T CL + + P+ W+ ++ +G+ +F
Sbjct: 4 TPPSVYPLAPGSAAQTNSMVTLGCL-VKGYFPEPVTVTWNSGSLSSGVHTF 53
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 31.2 bits (70), Expect = 0.079
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 10/57 (17%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCL----------QAEDIANTVEFILS 205
V +I P + S+ + K+ E + +++ V F+ S
Sbjct: 169 VFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLAS 225
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 30.6 bits (68), Expect = 0.11
Identities = 14/88 (15%), Positives = 22/88 (25%), Gaps = 25/88 (28%)
Query: 139 ARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLG------DKFDKSLYEAH---- 188
SL L + I G V + + LG D+ D +
Sbjct: 166 CESLAVLLLPFGVH------LSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL 219
Query: 189 ---------PCLQAEDIANTVEFILSSP 207
E++A L +P
Sbjct: 220 AHSKQVFREAAQNPEEVAEVFLTALRAP 247
>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Trypanosoma cruzi [TaxId: 5693]}
Length = 266
Score = 30.2 bits (67), Expect = 0.15
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQ----AEDIANTVEFILS 205
V +++PGL + ++ + + P Q A IA+ + F++S
Sbjct: 197 VNAVAPGLS---LLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVS 244
>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 235
Score = 30.2 bits (67), Expect = 0.16
Identities = 5/49 (10%), Positives = 15/49 (30%), Gaps = 6/49 (12%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSP 207
V +I P + + + + + + S I+ + +
Sbjct: 169 VLTIMPVTLDTPMNRKWMPNADHSSW------TPLSFISEHLLKWTTET 211
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 272
Score = 30.0 bits (67), Expect = 0.16
Identities = 21/132 (15%), Positives = 35/132 (26%), Gaps = 26/132 (19%)
Query: 86 TRLCLSMSDFHPDTWNPAWSVSTILTGLLSFMVERSPTLGSIEMSDYERRQLAARSLRFN 145
T+ S+ F+ + + LA +R
Sbjct: 128 TKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIR-- 185
Query: 146 LNDKNFCELFPDLVQSISPGLVKSQIFKSSLGD--------KFDKSLYEAHP---CLQAE 194
V S+SPG+V++ + F S E P + E
Sbjct: 186 -------------VNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE 232
Query: 195 DIANTVEFILSS 206
IAN + F+
Sbjct: 233 HIANIILFLADR 244
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Escherichia coli [TaxId: 562]}
Length = 243
Score = 30.1 bits (67), Expect = 0.16
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V ++PG +++ + ++ D+ + P A++IAN V F+ S
Sbjct: 175 VNVVAPGFIETDMTRALSDDQRAG-ILAQVPAGRLGGAQEIANAVAFLAS 223
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase
{Pseudomonas fragi [TaxId: 296]}
Length = 260
Score = 30.2 bits (67), Expect = 0.16
Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 20/81 (24%)
Query: 139 ARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFDKS-----------LYEA 187
+ + +I PG V++ + + + +K+ L E
Sbjct: 166 TKVTALETAGQGIT------ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK 219
Query: 188 HP---CLQAEDIANTVEFILS 205
P + E + T F+ S
Sbjct: 220 QPSLQFVTPEQLGGTAVFLAS 240
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase
{Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 251
Score = 29.6 bits (66), Expect = 0.21
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILS 205
V +I+PG + S + ++ K++ P E++AN F+ S
Sbjct: 184 VNAIAPGFISSDMTDKI-SEQIKKNIISNIPAGRMGTPEEVANLACFLSS 232
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase
{Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 259
Score = 29.7 bits (66), Expect = 0.23
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 15/62 (24%)
Query: 159 VQSISPGLVKSQIFKSSLG------------DKFDKSLYEAHP---CLQAEDIANTVEFI 203
V I+PG VK+ +F + +K D+ L +P DI V +
Sbjct: 180 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 239
Query: 204 LS 205
Sbjct: 240 CQ 241
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil
seed rape (Brassica napus) [TaxId: 3708]}
Length = 244
Score = 28.9 bits (64), Expect = 0.38
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHP---CLQAEDIANTVEFILSSP 207
V + PG + S + LG+ +K + P Q E++A VEF+ SP
Sbjct: 176 VNVVCPGFIASDMTAK-LGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSP 226
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus
bisporus) [TaxId: 5341]}
Length = 260
Score = 28.1 bits (62), Expect = 0.75
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPC---LQAEDIANTVEFILS 205
V ++SPG V + + K P Q E++ +LS
Sbjct: 192 VNALSPGYVNTDQTAH-MDKKIRDHQASNIPLNRFAQPEEMTGQAILLLS 240
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase
{Streptomyces coelicolor [TaxId: 1902]}
Length = 257
Score = 27.8 bits (61), Expect = 0.85
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 13/60 (21%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFD----------KSLYEAHP---CLQAEDIANTVEFILS 205
V ++ PG V++ + S D + P +Q ++A V +++
Sbjct: 178 VNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG 237
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 27.7 bits (61), Expect = 1.1
Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 10/72 (13%)
Query: 139 ARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLG----DKFDKSLYEAHPCLQAE 194
SL SI+PG+ ++ + + + L +HP +E
Sbjct: 162 TNSLAKLAPITGVT------AYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSE 215
Query: 195 DIANTVEFILSS 206
+ +
Sbjct: 216 QCGQNFVKAIEA 227
>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of
estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 302
Score = 27.3 bits (60), Expect = 1.3
Identities = 9/52 (17%), Positives = 16/52 (30%), Gaps = 8/52 (15%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHV 210
+I+P + L EA L+ E +A V ++
Sbjct: 187 CNTIAPNAGSRMTE-----TVMPEDLVEA---LKPEYVAPLVLWLCHESCEE 230
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 26.2 bits (57), Expect = 1.3
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 68 FKPPSIYMITP-----NGRFKTNTRLCLSMSDFHPDTWNPAWSV 106
F PP++ ++ T LCL +S + P T W
Sbjct: 2 FTPPTVKILQSSCDGGGHFPPTIQLLCL-VSGYTPGTIQITWLE 44
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 256
Score = 27.5 bits (60), Expect = 1.3
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 19/80 (23%)
Query: 139 ARSLRFNLNDKNFCELFPDLVQSISPGLVKSQIFKSSLGDKFD----------KSLYEAH 188
+S NL V +I+PG+V + + D + + A
Sbjct: 163 TQSAGLNLIRHGIN------VNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAV 216
Query: 189 P---CLQAEDIANTVEFILS 205
P +AED+ F+ +
Sbjct: 217 PFGRMGRAEDLTGMAIFLAT 236
>d1igtb3 b.1.1.2 (B:236-361) Immunoglobulin heavy chain gamma
constant domain 2, CH2-gamma {Mouse (Mus musculus),
gamma2 [TaxId: 10090]}
Length = 119
Score = 26.6 bits (58), Expect = 1.4
Identities = 6/43 (13%), Positives = 13/43 (30%), Gaps = 4/43 (9%)
Query: 67 PFKPPSIYMITPN----GRFKTNTRLCLSMSDFHPDTWNPAWS 105
PS+++ P + + + D D + S
Sbjct: 12 LLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQIS 54
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 275
Score = 26.4 bits (57), Expect = 2.5
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 13/53 (24%)
Query: 159 VQSISPGLVKSQIFKSSLGDKFDKSLYEAHPCLQAEDIANTVEFILSSPPHVQ 211
+ + PG V++ + G K KS E+ A T ++ PP +
Sbjct: 221 LNACCPGWVRTDMA----GPKATKS---------PEEGAETPVYLALLPPDAE 260
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 266
Score = 26.0 bits (57), Expect = 3.2
Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 117 MVERSPTLGSIEMSDYERRQLAARSLRFNLNDKNFCELFPDLVQSIS 163
+VE T+G IE + A R + + ++ + LV ++
Sbjct: 138 LVEIGGTVGDIESLPFLE---AIRQMAVEIGREHTLFMHLTLVPYMA 181
>d1k28d2 b.106.1.1 (D:201-376) Baseplate structural protein gp27
{Bacteriophage T4 [TaxId: 10665]}
Length = 176
Score = 25.7 bits (56), Expect = 3.5
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 17 MKLKKDPIPYVIAEPN 32
M + ++P P ++ EP+
Sbjct: 2 MMINQEPYPMIVGEPS 17
>d1m6ka_ e.3.1.1 (A:) Class D beta-lactamase {Escherichia coli,
OXA-1 [TaxId: 562]}
Length = 251
Score = 24.8 bits (53), Expect = 7.8
Identities = 10/69 (14%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Query: 68 FKPPSIYMITPNGRFKTNTRLCLSMSDFHPDTWNPAWSVSTIL-TGLLSFMVERSPTLGS 126
FK M T + + WN + T + ++ E + +G
Sbjct: 48 FKIALSLMAFDAEIIDQKTIFKWDKTPKGMEIWNSNHTPKTWMQFSVVWVSQEITQKIGL 107
Query: 127 IEMSDYERR 135
++ +Y +
Sbjct: 108 NKIKNYLKD 116
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.420
Gapped
Lambda K H
0.267 0.0521 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 808,454
Number of extensions: 36637
Number of successful extensions: 198
Number of sequences better than 10.0: 1
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 85
Length of query: 214
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 132
Effective length of database: 1,281,736
Effective search space: 169189152
Effective search space used: 169189152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.9 bits)