Query psy8180
Match_columns 471
No_of_seqs 224 out of 627
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 20:38:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8180.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8180hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ijy_A Frizzled homolog 8; WNT 99.9 1.5E-25 5.2E-30 196.0 5.5 96 2-97 32-128 (130)
2 1ijx_A Secreted frizzled-relat 99.9 8.1E-25 2.8E-29 190.6 4.4 96 2-98 27-123 (127)
3 4dkl_A MU-type opioid receptor 98.7 1E-06 3.5E-11 90.4 20.2 151 145-314 17-172 (464)
4 2z73_A Rhodopsin; visual pigme 98.6 5.8E-06 2E-10 85.1 24.3 155 139-312 28-190 (448)
5 4ea3_A Fusion protein of nocic 98.6 3.5E-06 1.2E-10 86.6 21.9 150 146-314 126-280 (434)
6 3uon_A Human M2 muscarinic ace 98.6 1.5E-06 5E-11 89.4 17.7 158 142-314 20-182 (467)
7 4amj_A Beta-1 adrenergic recep 98.5 2.5E-06 8.6E-11 82.4 16.6 139 141-298 7-151 (315)
8 2lnl_A C-X-C chemokine recepto 98.5 2.7E-05 9.3E-10 75.3 23.8 148 133-299 1-149 (296)
9 3rze_A Histamine H1 receptor, 98.5 1.8E-06 6.3E-11 88.2 15.8 153 147-314 10-167 (452)
10 2ks9_A Substance-P receptor; w 98.5 1.5E-05 5.1E-10 79.2 21.8 148 149-311 36-183 (364)
11 3eml_A Human adenosine A2A rec 98.5 5.4E-06 1.8E-10 85.5 18.2 132 147-295 23-156 (488)
12 3odu_A C-X-C chemokine recepto 98.4 7.2E-06 2.5E-10 85.1 18.8 164 132-314 36-202 (502)
13 1u19_A Rhodopsin; G protein-co 98.4 1.3E-05 4.4E-10 78.8 17.5 158 140-312 33-192 (349)
14 4eiy_A Adenosine receptor A2A/ 98.3 1.2E-05 4.2E-10 81.9 17.1 133 146-295 32-166 (447)
15 3vw7_A Proteinase-activated re 98.2 1.9E-05 6.4E-10 81.6 15.2 154 145-313 20-177 (484)
16 3sn6_R Lysozyme, beta-2 adrene 98.2 4.1E-05 1.4E-09 80.4 17.5 134 145-298 182-322 (514)
17 3pbl_A D(3) dopamine receptor, 98.2 4.8E-05 1.6E-09 78.4 17.7 152 148-315 41-197 (481)
18 2rh1_A Beta-2-adrenergic recep 98.1 0.00029 9.8E-09 73.8 21.2 134 145-297 40-179 (500)
19 3v2y_A Sphingosine 1-phosphate 97.9 0.0006 2.1E-08 71.8 20.9 151 143-312 61-213 (520)
20 4grv_A Neurotensin receptor ty 97.1 0.0054 1.8E-07 64.3 14.3 135 149-297 36-176 (510)
21 3hkl_A Muscle, skeletal recept 96.2 0.0062 2.1E-07 55.4 5.8 87 5-94 45-152 (197)
No 1
>1ijy_A Frizzled homolog 8; WNT receptor, frizzled protein structure, cysteine-rich, signaling protein; 1.35A {Mus musculus} SCOP: a.141.1.1
Probab=99.91 E-value=1.5e-25 Score=195.98 Aligned_cols=96 Identities=32% Similarity=0.737 Sum_probs=90.2
Q ss_pred CccchHHHHHHHhhhhhhccccCCchhhhhhhccccccccccccCcccCCchhhHHHHhcCCHhhhhhccCCCCCCCCCC
Q psy8180 2 TKWSMGFNRMYRLQALMPLINSNCSRHIRFFLCSVYAPLCSEHVIGAIPSCRGLCEDVKADCLPTLTALNFILPPLFNCS 81 (471)
Q Consensus 2 ~~~~tQ~~~~~~l~~~~~L~~~~C~~~l~~fLCs~~~P~C~~~~~~~i~PCrslC~~~~~~C~~~l~~~~~~wP~~l~C~ 81 (471)
..|.||+|+..+++.|.+|++.+||+++++||||+|+|+|+++.+.+++|||++||+++++|+++|+.+|++||+.|+|+
T Consensus 32 l~h~~q~ea~~~l~~f~~L~~~~C~~~l~~FlCs~~~P~C~~~~~~~~~PCRslCe~v~~~C~~~~~~~g~~WP~~l~C~ 111 (130)
T 1ijy_A 32 FNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYKKPLPPCRSVCERAKAGCAPLMRQYGFAWPDRMRCD 111 (130)
T ss_dssp TCCCSHHHHHHHHGGGHHHHHHTSCTTHHHHHHHHHSCBCCSSCCSCCCBCHHHHHHHHHHHHHHHHHTTCCCCGGGCGG
T ss_pred CCCcCHHHHHHHHHHHHHHhccCcCHHHHHHHHHhhCCcccCCCCcccCccHHHHHHHhcchHHHHHhcCCCCCCcCCcc
Confidence 46899999999999999999999999999999999999999877899999999999999999999999999999999999
Q ss_pred CCCCCCCCC-cccCCCC
Q psy8180 82 RFPVSENNG-LCMQNPI 97 (471)
Q Consensus 82 ~fP~~~~~~-~C~~~~~ 97 (471)
+||+.++.+ .|++++.
T Consensus 112 ~fP~~~~~~~~C~~~~~ 128 (130)
T 1ijy_A 112 RLPEQGNPDTLCMDYER 128 (130)
T ss_dssp GSCCSSCTTSCCBCCCC
T ss_pred cCCCCCCCCCcCCCCCC
Confidence 999987554 8998864
No 2
>1ijx_A Secreted frizzled-related sequence protein 3; WNT receptor, frizzled protein structure, cysteine-rich, SIG protein; 1.90A {Mus musculus} SCOP: a.141.1.1
Probab=99.90 E-value=8.1e-25 Score=190.62 Aligned_cols=96 Identities=27% Similarity=0.675 Sum_probs=88.6
Q ss_pred CccchHHHHHHHhhhhhhccccCCchhhhhhhccccccccccccC-cccCCchhhHHHHhcCCHhhhhhccCCCCCCCCC
Q psy8180 2 TKWSMGFNRMYRLQALMPLINSNCSRHIRFFLCSVYAPLCSEHVI-GAIPSCRGLCEDVKADCLPTLTALNFILPPLFNC 80 (471)
Q Consensus 2 ~~~~tQ~~~~~~l~~~~~L~~~~C~~~l~~fLCs~~~P~C~~~~~-~~i~PCrslC~~~~~~C~~~l~~~~~~wP~~l~C 80 (471)
..|.||+|+..++++|.+|++.+||+++++||||+|+|+|+++.. .+++|||++||++|++|+++|+.+|+.||+.|+|
T Consensus 27 lgh~~q~ea~~~~~~f~~Lv~~~C~~~l~~FlCs~~~P~C~~~~~~~~i~PCRslCe~vr~~C~~~~~~~g~~WP~~l~C 106 (127)
T 1ijx_A 27 LHHSTQANAILAMEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPESLAC 106 (127)
T ss_dssp TCCSSHHHHHHHHHTTHHHHTTTCCTTHHHHHHHHHSCBCBSSCSSSCCCBCHHHHHHHHHHHHHHHHHTTCCCCGGGCG
T ss_pred CCCcCHHHHHHHHHHHHHHHccCcCHHHHhhhhhccCCcccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCCCCcCcc
Confidence 468999999999999999999999999999999999999987544 8999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCCCCC
Q psy8180 81 SRFPVSENNGLCMQNPIN 98 (471)
Q Consensus 81 ~~fP~~~~~~~C~~~~~~ 98 (471)
++||+.+ ++.|++|+..
T Consensus 107 ~~fP~~~-~~~C~~p~~~ 123 (127)
T 1ijx_A 107 DELPVYD-RGVCISPEAI 123 (127)
T ss_dssp GGCCCTT-TCEEEEECCC
T ss_pred ccCCCCC-CCcccCcccc
Confidence 9999864 4689987754
No 3
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=98.68 E-value=1e-06 Score=90.37 Aligned_cols=151 Identities=7% Similarity=0.085 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhc---CCCCccccCCCCCCCCCc
Q psy8180 145 KNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSS---LGPNALTCVTPPSPDAVP 221 (471)
Q Consensus 145 ~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~---~g~~~i~C~~~~~g~r~~ 221 (471)
.-.+.....+++++++++.++.++++.-++++.+-....++-+|++.+++.+....... .+. .
T Consensus 17 ~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~~~------------~-- 82 (464)
T 4dkl_A 17 AITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGT------------W-- 82 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS------------C--
T ss_pred HHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------c--
Confidence 34455667777888899998888887655543332244556778888776655222211 110 0
Q ss_pred eeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhh--hhhhhhHHHHHHHHHHHHHHHHHHHhccc
Q psy8180 222 YIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEA--LHSLSTYYHIAAWGIPAVYAQLALALHHV 299 (471)
Q Consensus 222 ~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~--i~~~~~~~h~~aw~ip~i~tii~l~~~~v 299 (471)
..++..|.+.+++.+++..++....++++++=|+++.+-..... -.++.....+++|.+++++++..+....+
T Consensus 83 -----~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~ 157 (464)
T 4dkl_A 83 -----PFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATT 157 (464)
T ss_dssp -----CSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCC
T ss_pred -----ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheee
Confidence 02457899999999999888888889999999998764221211 12445667789999999999888876665
Q ss_pred CCCceeeEEEeeeCC
Q psy8180 300 SGDELTGLCYISEPA 314 (471)
Q Consensus 300 ~~~~~~g~CwI~~~~ 314 (471)
..+.....|......
T Consensus 158 ~~~~~~~~c~~~~~~ 172 (464)
T 4dkl_A 158 KYRQGSIDCTLTFSH 172 (464)
T ss_dssp EEETTEEECCBCCSS
T ss_pred cccCCCceEEeecCC
Confidence 444444568775443
No 4
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=98.63 E-value=5.8e-06 Score=85.06 Aligned_cols=155 Identities=10% Similarity=0.025 Sum_probs=101.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHH-----HHHhcCCCCccccCC
Q psy8180 139 LYRSEDKNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVM-----IMKSSLGPNALTCVT 213 (471)
Q Consensus 139 ~ft~~~~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~-----li~~~~g~~~i~C~~ 213 (471)
.+.+.....+..+..+++++++++.++.++++.-.+++.+-....++.+|++.++.++.. +.....+.
T Consensus 28 ~~~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~------- 100 (448)
T 2z73_A 28 QVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKK------- 100 (448)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTS-------
T ss_pred CCCchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCC-------
Confidence 345555666777888888999999998888776554433333566778888888876543 11111110
Q ss_pred CCCCCCCceeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccch--hhhhhhhhHHHHHHHHHHHHHHH
Q psy8180 214 PPSPDAVPYIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSS--EALHSLSTYYHIAAWGIPAVYAQ 291 (471)
Q Consensus 214 ~~~g~r~~~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~--~~i~~~~~~~h~~aw~ip~i~ti 291 (471)
. . .++..|.+.+++.+++..++....++++++-|+++.+-... ....++.....+++|++++++++
T Consensus 101 -----~---~----~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~ 168 (448)
T 2z73_A 101 -----W---I----FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAI 168 (448)
T ss_dssp -----C---C----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHS
T ss_pred -----c---c----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHH
Confidence 0 0 12467999999999998888888899999999988642111 11234566778999999999887
Q ss_pred HHHHh-cccCCCceeeEEEeee
Q psy8180 292 LALAL-HHVSGDELTGLCYISE 312 (471)
Q Consensus 292 i~l~~-~~v~~~~~~g~CwI~~ 312 (471)
..+.. +.++.+.....|+...
T Consensus 169 ~~~~~~~~~~~~~~~~~c~~~~ 190 (448)
T 2z73_A 169 GPIFGWGAYTLEGVLCNCSFDY 190 (448)
T ss_dssp GGGGTSSCEEECTTSSSEEECC
T ss_pred HHHhceeeeeecCCceeEeccc
Confidence 66653 2232233344687753
No 5
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=98.61 E-value=3.5e-06 Score=86.60 Aligned_cols=150 Identities=11% Similarity=0.139 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHH---hcCCCCccccCCCCCCCCCce
Q psy8180 146 NLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMK---SSLGPNALTCVTPPSPDAVPY 222 (471)
Q Consensus 146 ~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~---~~~g~~~i~C~~~~~g~r~~~ 222 (471)
-.+.....+++++++++.++.++++.-++++.+-....++-++++.++..+..... ...+. .
T Consensus 126 ~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~~~p~~~~~~~~~~------------~--- 190 (434)
T 4ea3_A 126 VTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGF------------W--- 190 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTS------------C---
T ss_pred HHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhcC------------C---
Confidence 34455666677888888988887776544432222344556677776653322111 11110 0
Q ss_pred eeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchh--hhhhhhhHHHHHHHHHHHHHHHHHHHhcccC
Q psy8180 223 IAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSE--ALHSLSTYYHIAAWGIPAVYAQLALALHHVS 300 (471)
Q Consensus 223 ~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~--~i~~~~~~~h~~aw~ip~i~tii~l~~~~v~ 300 (471)
..++..|.+.+++.+++..++....++++++-|+++.+-.... ...++.....+++|.+++++++..+......
T Consensus 191 ----~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~ 266 (434)
T 4ea3_A 191 ----PFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQ 266 (434)
T ss_dssp ----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
T ss_pred ----cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeE
Confidence 0234679999999999988888888999999999876421111 1234455677889999999998777776665
Q ss_pred CCceeeEEEeeeCC
Q psy8180 301 GDELTGLCYISEPA 314 (471)
Q Consensus 301 ~~~~~g~CwI~~~~ 314 (471)
.+.....|.+....
T Consensus 267 ~~~~~~~c~~~~~~ 280 (434)
T 4ea3_A 267 VEDEEIECLVEIPT 280 (434)
T ss_dssp CCSSCCCEEECCCS
T ss_pred eecCceeEEEecCC
Confidence 55555678876543
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=98.57 E-value=1.5e-06 Score=89.39 Aligned_cols=158 Identities=13% Similarity=0.167 Sum_probs=98.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCc
Q psy8180 142 SEDKNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVP 221 (471)
Q Consensus 142 ~~~~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~ 221 (471)
+.+.-.+.....+++++++++.++.++++.-+++..+-....++-++++.+++.+..+...+.. .. .+ .
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~--~~------~~-~-- 88 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLY--TV------IG-Y-- 88 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHH--HH------SS-S--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHH--Hh------cC-C--
Confidence 3445566677778888899999888887764443222224455677777777655433222110 00 00 0
Q ss_pred eeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc--cchhhhhhhhhHHHHHHHHHHHHHHHHHHHhccc
Q psy8180 222 YIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANK--WSSEALHSLSTYYHIAAWGIPAVYAQLALALHHV 299 (471)
Q Consensus 222 ~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k--~~~~~i~~~~~~~h~~aw~ip~i~tii~l~~~~v 299 (471)
.. .++..|.+.+++.+.+..++.+..++++++=|+++.+- +....-.+......+++|++++++++..+.....
T Consensus 89 ~~----~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 164 (467)
T 3uon_A 89 WP----LGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQF 164 (467)
T ss_dssp CC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc----CCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 00 23467999999999998888888899999999988642 1111123445677899999999998877665322
Q ss_pred ---CCCceeeEEEeeeCC
Q psy8180 300 ---SGDELTGLCYISEPA 314 (471)
Q Consensus 300 ---~~~~~~g~CwI~~~~ 314 (471)
..+...+.|......
T Consensus 165 ~~~~~~~~~~~C~~~~~~ 182 (467)
T 3uon_A 165 IVGVRTVEDGECYIQFFS 182 (467)
T ss_dssp HHSCCCCCSSCCCCGGGG
T ss_pred cccccCCCCCcceeecCc
Confidence 112233468875443
No 7
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=98.51 E-value=2.5e-06 Score=82.42 Aligned_cols=139 Identities=9% Similarity=0.090 Sum_probs=88.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHH----HhcCCCCccccCCCCC
Q psy8180 141 RSEDKNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIM----KSSLGPNALTCVTPPS 216 (471)
Q Consensus 141 t~~~~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li----~~~~g~~~i~C~~~~~ 216 (471)
+++..........+.++++++++++.+.++.-++++.+-....++-+|++.++.++..+. ....|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~---------- 76 (315)
T 4amj_A 7 SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGT---------- 76 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSS----------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCC----------
Confidence 344445566777778888999998888877644432222234445666666654321111 111110
Q ss_pred CCCCceeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhh--hhhhhhHHHHHHHHHHHHHHHHHH
Q psy8180 217 PDAVPYIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEA--LHSLSTYYHIAAWGIPAVYAQLAL 294 (471)
Q Consensus 217 g~r~~~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~--i~~~~~~~h~~aw~ip~i~tii~l 294 (471)
. ..++..|.+.+++.+.+..++....++++++-|++..+-...+. -.++.....+++|.++++.++.++
T Consensus 77 --~-------~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~ 147 (315)
T 4amj_A 77 --W-------LWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI 147 (315)
T ss_dssp --C-------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --e-------eccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHH
Confidence 0 02356899999999999888888889999999998764211111 134455677889999999998887
Q ss_pred Hhcc
Q psy8180 295 ALHH 298 (471)
Q Consensus 295 ~~~~ 298 (471)
....
T Consensus 148 ~~~~ 151 (315)
T 4amj_A 148 MMHW 151 (315)
T ss_dssp HTTT
T ss_pred HHHh
Confidence 7543
No 8
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=98.51 E-value=2.7e-05 Score=75.25 Aligned_cols=148 Identities=11% Similarity=0.112 Sum_probs=94.8
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccC
Q psy8180 133 RCDEDALYRSEDKNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCV 212 (471)
Q Consensus 133 pC~~p~~ft~~~~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~ 212 (471)
||..+ --+ -++..+-..-.+..++++++.++.+.++.-++++.+-++--++-+|++.++.++......... .
T Consensus 1 PC~~e-~~~-~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~~---~--- 72 (296)
T 2lnl_A 1 PCMLE-TET-LNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASK---V--- 72 (296)
T ss_dssp CCTTS-CSC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHHH---H---
T ss_pred CCCCc-ccc-hhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhhc---c---
Confidence 67654 111 123344444556778888999888888776665444445666788888888766543322110 0
Q ss_pred CCCCCCCCceeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchh-hhhhhhhHHHHHHHHHHHHHHH
Q psy8180 213 TPPSPDAVPYIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSE-ALHSLSTYYHIAAWGIPAVYAQ 291 (471)
Q Consensus 213 ~~~~g~r~~~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~-~i~~~~~~~h~~aw~ip~i~ti 291 (471)
.+ . ..++..|...+++.+.+..++..-.+.++++=|++..+-.... ...+....-.+++|.++++.++
T Consensus 73 ---~~-~-------~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~ 141 (296)
T 2lnl_A 73 ---NG-W-------IFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSL 141 (296)
T ss_dssp ---SS-S-------CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CC-C-------ccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhhhhhHheehHHHHHHHHHhc
Confidence 00 0 0245789999999999988888888999999999876421111 1123344555778999999887
Q ss_pred HHHHhccc
Q psy8180 292 LALALHHV 299 (471)
Q Consensus 292 i~l~~~~v 299 (471)
..+.....
T Consensus 142 p~~~~~~~ 149 (296)
T 2lnl_A 142 PFFLFRQA 149 (296)
T ss_dssp HHHHTSSC
T ss_pred chhhccee
Confidence 77665543
No 9
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=98.49 E-value=1.8e-06 Score=88.24 Aligned_cols=153 Identities=13% Similarity=0.114 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCceeeec
Q psy8180 147 LVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVPYIAVD 226 (471)
Q Consensus 147 ~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~~~~~~ 226 (471)
.+.....+.+++++++.++.++++.-++++.+-....++-++++.++..+..+...+.. .. -.. . .
T Consensus 10 ~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~--~~-~~~-----~---~--- 75 (452)
T 3rze_A 10 PLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILY--LL-MSK-----W---S--- 75 (452)
T ss_dssp GGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHH--HH-SSS-----C---S---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH--HH-cCC-----c---c---
Confidence 34456677888899999988888775554333335566778888887755433222110 00 000 0 0
Q ss_pred CCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhh--hhhhhhHHHHHHHHHHHHHHHHHHHhcccCCCc-
Q psy8180 227 ALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEA--LHSLSTYYHIAAWGIPAVYAQLALALHHVSGDE- 303 (471)
Q Consensus 227 g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~--i~~~~~~~h~~aw~ip~i~tii~l~~~~v~~~~- 303 (471)
.++..|.+.+++.+++..++.+..++++++-|+++.+-..... ..++.....+++|.+++++++..+...++..+.
T Consensus 76 -~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~ 154 (452)
T 3rze_A 76 -LGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTS 154 (452)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC------
T ss_pred -CCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 2346899999999999888888889999999998864322111 234456778899999998887766666654432
Q ss_pred --eeeEEEeeeCC
Q psy8180 304 --LTGLCYISEPA 314 (471)
Q Consensus 304 --~~g~CwI~~~~ 314 (471)
....|+.....
T Consensus 155 ~~~~~~C~~~~~~ 167 (452)
T 3rze_A 155 VRREDKCETDFYD 167 (452)
T ss_dssp -CCSSSSCCSCTT
T ss_pred cCCCCeecCCCcc
Confidence 33468754443
No 10
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=98.48 E-value=1.5e-05 Score=79.21 Aligned_cols=148 Identities=7% Similarity=0.011 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCceeeecCC
Q psy8180 149 ERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVPYIAVDAL 228 (471)
Q Consensus 149 ~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~~~~~~g~ 228 (471)
.....+.+++++++.++.++++.-++++.+-....++-++++.++.++..+...+.. .. .+ . .. .
T Consensus 36 ~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~--~~------~~-~--~~----~ 100 (364)
T 2ks9_A 36 AAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTY--AV------HN-E--WY----Y 100 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHH--HH------HT-S--CS----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HH------cC-C--cc----c
Confidence 555667788888889888877765544333224455667777776654322211100 00 00 0 00 2
Q ss_pred CCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHhcccCCCceeeEE
Q psy8180 229 QSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEALHSLSTYYHIAAWGIPAVYAQLALALHHVSGDELTGLC 308 (471)
Q Consensus 229 ~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~i~~~~~~~h~~aw~ip~i~tii~l~~~~v~~~~~~g~C 308 (471)
++..|.+.+++.+.+..++....++++++=|++..+-.......++.....+++|.++++.++..+...+++.++....|
T Consensus 101 ~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C 180 (364)
T 2ks9_A 101 GLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVC 180 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSB
T ss_pred hHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEE
Confidence 34679999999999988888777999999999886422222223445567788999999888766655555544444568
Q ss_pred Eee
Q psy8180 309 YIS 311 (471)
Q Consensus 309 wI~ 311 (471)
...
T Consensus 181 ~~~ 183 (364)
T 2ks9_A 181 MIE 183 (364)
T ss_dssp CCC
T ss_pred eec
Confidence 764
No 11
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=98.45 E-value=5.4e-06 Score=85.52 Aligned_cols=132 Identities=9% Similarity=0.075 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCceeeec
Q psy8180 147 LVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVPYIAVD 226 (471)
Q Consensus 147 ~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~~~~~~ 226 (471)
.......+++++++++.+++++++.-+++..+-....++-+|++.+++.+..+...+.-. .+ . .
T Consensus 23 ~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~---------~~-~---~--- 86 (488)
T 3eml_A 23 VYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS---------TG-F---C--- 86 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT---------TC-C---E---
T ss_pred HHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cc-c---c---
Confidence 445566677888889998888877655443332244556677777776554443222100 00 0 1
Q ss_pred CCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccc--hhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy8180 227 ALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWS--SEALHSLSTYYHIAAWGIPAVYAQLALA 295 (471)
Q Consensus 227 g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~--~~~i~~~~~~~h~~aw~ip~i~tii~l~ 295 (471)
..+..|.+.+++.+++..++..-.++++++=|+++.+-.. ...-.+......+++|.+++++++.++.
T Consensus 87 -~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~ 156 (488)
T 3eml_A 87 -AACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML 156 (488)
T ss_dssp -ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1345799999999999888888889999999998764211 1111244556778899999999876665
No 12
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=98.44 E-value=7.2e-06 Score=85.11 Aligned_cols=164 Identities=11% Similarity=0.088 Sum_probs=102.5
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-ChhHHHHHHHHHHHHHHHHHHhcCCCCccc
Q psy8180 132 PRCDEDALYRSEDKNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYP-ERPVIFIAFCYNLISFVMIMKSSLGPNALT 210 (471)
Q Consensus 132 ~pC~~p~~ft~~~~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp-~~~iifl~~c~~~~sl~~li~~~~g~~~i~ 210 (471)
.+|+.+ -..+-+...+.....+++++++++.++.++++.-++ +.+.| ...++-+|++.+++.+..-.... . ...
T Consensus 36 ~~~~~~-~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~-~l~~~~~~~l~~La~~Dll~~~~~p~~~~-~--~~~ 110 (502)
T 3odu_A 36 EPCFRE-ENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQK-KLRSMTDKYRLHLSVADLLFVITLPFWAV-D--AVA 110 (502)
T ss_dssp -CCCCC-CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CSCCHHHHHHHHHHHHHHHHHTTHHHHHH-H--HHT
T ss_pred CCCccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHH-H--Hhc
Confidence 355543 444455666677778888889999988877665433 33333 33445666676665332111111 0 000
Q ss_pred cCCCCCCCCCceeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhhh--hhhhhHHHHHHHHHHHH
Q psy8180 211 CVTPPSPDAVPYIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEAL--HSLSTYYHIAAWGIPAV 288 (471)
Q Consensus 211 C~~~~~g~r~~~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~i--~~~~~~~h~~aw~ip~i 288 (471)
.. . ..+..|.+.+++.+.+..++.+-.++++++-|+++.+-...... .++.....+++|.++++
T Consensus 111 -~~-----~--------~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~ 176 (502)
T 3odu_A 111 -NW-----Y--------FGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALL 176 (502)
T ss_dssp -CC-----C--------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHH
T ss_pred -CC-----c--------CCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHH
Confidence 00 0 12356999999999998888888899999999988642222222 23345667889999999
Q ss_pred HHHHHHHhcccCCCceeeEEEeeeCC
Q psy8180 289 YAQLALALHHVSGDELTGLCYISEPA 314 (471)
Q Consensus 289 ~tii~l~~~~v~~~~~~g~CwI~~~~ 314 (471)
+++..+....+........|.....+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~C~~~~~~ 202 (502)
T 3odu_A 177 LTIPDFIFANVSEADDRYICDRFYPN 202 (502)
T ss_dssp TTHHHHHHEEEEECSSSEEEEECCSS
T ss_pred HHHHHHHheeeeccCCceEEeecCCc
Confidence 99888887766544445579865444
No 13
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=98.36 E-value=1.3e-05 Score=78.85 Aligned_cols=158 Identities=13% Similarity=0.040 Sum_probs=97.6
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCC
Q psy8180 140 YRSEDKNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDA 219 (471)
Q Consensus 140 ft~~~~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r 219 (471)
-++.+...+.....+.+++++++.++.++++.-++++.+-....++-+|++.++..+..+...... .. .+ .
T Consensus 33 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~--~~------~~-~ 103 (349)
T 1u19_A 33 AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYT--SL------HG-Y 103 (349)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHH--HH------HT-S
T ss_pred cchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHH--Hh------cC-e
Confidence 344555666677788888999999988888765544333224555677888887665433322110 00 00 0
Q ss_pred CceeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHh-c
Q psy8180 220 VPYIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSE-ALHSLSTYYHIAAWGIPAVYAQLALAL-H 297 (471)
Q Consensus 220 ~~~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~-~i~~~~~~~h~~aw~ip~i~tii~l~~-~ 297 (471)
. ..++..|.+.+++.+.+..++..-.++++++-|++..+-.... .-.++.....+++|.++++.++.++.. +
T Consensus 104 ---~---~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~ 177 (349)
T 1u19_A 104 ---F---VFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWS 177 (349)
T ss_dssp ---C---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSS
T ss_pred ---e---eCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCccceeeccchhHHHHHHHHHHHHHHHHHHHHhee
Confidence 0 0134679999999999888888777999999999876421111 112345566788999999888776653 2
Q ss_pred ccCCCceeeEEEeee
Q psy8180 298 HVSGDELTGLCYISE 312 (471)
Q Consensus 298 ~v~~~~~~g~CwI~~ 312 (471)
.+..+.....|....
T Consensus 178 ~~~~~~~~~~C~~~~ 192 (349)
T 1u19_A 178 RYIPEGMQCSCGIDY 192 (349)
T ss_dssp CCEEETTTTEEECCC
T ss_pred eeeccCCceeecccc
Confidence 232222334687643
No 14
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=98.32 E-value=1.2e-05 Score=81.94 Aligned_cols=133 Identities=9% Similarity=0.081 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCceeee
Q psy8180 146 NLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVPYIAV 225 (471)
Q Consensus 146 ~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~~~~~ 225 (471)
...-....+.+++++++.++.++++.-+++..+-....++-+|++.+++++..+...+.-. .+ . .
T Consensus 32 ~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~---------~~-~---~-- 96 (447)
T 4eiy_A 32 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS---------TG-F---C-- 96 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH---------TT-C---E--
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cc-c---c--
Confidence 3444556677888888998888877655443332344556777788776554333221100 00 0 1
Q ss_pred cCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhh--hhhhhhHHHHHHHHHHHHHHHHHHH
Q psy8180 226 DALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEA--LHSLSTYYHIAAWGIPAVYAQLALA 295 (471)
Q Consensus 226 ~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~--i~~~~~~~h~~aw~ip~i~tii~l~ 295 (471)
..+..|.+.+++.+++..++..-.++++++=|+++.+-..... -.++.....+++|.+++++++.++.
T Consensus 97 --~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~ 166 (447)
T 4eiy_A 97 --AACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML 166 (447)
T ss_dssp --EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGG
T ss_pred --cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhh
Confidence 1235799999999998888877779999999988764211111 1244556778899999998876665
No 15
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=98.20 E-value=1.9e-05 Score=81.56 Aligned_cols=154 Identities=12% Similarity=0.127 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCceee
Q psy8180 145 KNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVPYIA 224 (471)
Q Consensus 145 ~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~~~~ 224 (471)
...+.....+++++++++.+++++++.-+++..+-....++-+|++.+++.+......... +. .+ . ..
T Consensus 20 ~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~---~~-----~~-~--~~- 87 (484)
T 3vw7_A 20 TLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYY---FS-----GS-D--WQ- 87 (484)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHH---HT-----TS-C--CC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hh-----cC-C--cc-
Confidence 3445566667788888888888877765544322223455667777777644322221100 00 00 0 00
Q ss_pred ecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhh--hhhhhhHHHHHHHHHHHHHHHHHHHhccc--C
Q psy8180 225 VDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEA--LHSLSTYYHIAAWGIPAVYAQLALALHHV--S 300 (471)
Q Consensus 225 ~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~--i~~~~~~~h~~aw~ip~i~tii~l~~~~v--~ 300 (471)
.++..|.+.+++.+++..++..-.++++++=|+++.+-..... -.++.....+++|.+++++++..+..... .
T Consensus 88 ---~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~ 164 (484)
T 3vw7_A 88 ---FGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQV 164 (484)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred ---cchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 2457899999999999888887779999999998764322211 12445667789999999988877765432 1
Q ss_pred CCceeeEEEeeeC
Q psy8180 301 GDELTGLCYISEP 313 (471)
Q Consensus 301 ~~~~~g~CwI~~~ 313 (471)
.+.....|.....
T Consensus 165 ~~~~~~~C~~~~~ 177 (484)
T 3vw7_A 165 PGLGITTCHDVLS 177 (484)
T ss_dssp TTTTEEEESSSCS
T ss_pred CCCCCceeeccCC
Confidence 2233457876433
No 16
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=98.17 E-value=4.1e-05 Score=80.42 Aligned_cols=134 Identities=6% Similarity=0.031 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-ChhHHHHHHHHHHHHHHHHHH----hcCCCCccccCCCCCCCC
Q psy8180 145 KNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYP-ERPVIFIAFCYNLISFVMIMK----SSLGPNALTCVTPPSPDA 219 (471)
Q Consensus 145 ~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp-~~~iifl~~c~~~~sl~~li~----~~~g~~~i~C~~~~~g~r 219 (471)
.-.+.....+++++++++.++++.++.-.++ .|.| ...++-+|++.+++++..+.. ...+. .
T Consensus 182 ~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~-lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~------------~ 248 (514)
T 3sn6_R 182 VVGMGIVMSLIVLAIVFGNVLVITAIAKFER-LQTVTNYFITSLACADLVMGLAVVPFGAAHILTKT------------W 248 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG-GCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTS------------C
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhhheecccc-cccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCC------------e
Confidence 3445566777888888888888777664333 3333 344556777777654432221 11110 0
Q ss_pred CceeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhh--hhhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy8180 220 VPYIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEA--LHSLSTYYHIAAWGIPAVYAQLALALH 297 (471)
Q Consensus 220 ~~~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~--i~~~~~~~h~~aw~ip~i~tii~l~~~ 297 (471)
. .++..|.+.+++.+++..++..-.++++++=|+++.+-..... -.++.....+++|.+++++++.++...
T Consensus 249 ---~----~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~ 321 (514)
T 3sn6_R 249 ---T----FGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMH 321 (514)
T ss_dssp ---C----SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTT
T ss_pred ---e----CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 0 2356899999999999888887779999999988764211111 124456677899999999888777654
Q ss_pred c
Q psy8180 298 H 298 (471)
Q Consensus 298 ~ 298 (471)
.
T Consensus 322 ~ 322 (514)
T 3sn6_R 322 W 322 (514)
T ss_dssp T
T ss_pred c
Confidence 3
No 17
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=98.17 E-value=4.8e-05 Score=78.39 Aligned_cols=152 Identities=11% Similarity=0.069 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCceeeecC
Q psy8180 148 VERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVPYIAVDA 227 (471)
Q Consensus 148 ~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~~~~~~g 227 (471)
......+++++++++.++.++++.-++++.+-....++-+|++.+++++..+...+.. .. .++ . ..
T Consensus 41 ~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~--~~-----~~~-~--~~---- 106 (481)
T 3pbl_A 41 YALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYL--EV-----TGG-V--WN---- 106 (481)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHH--HH-----TTS-C--CC----
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHH--HH-----hcC-c--cc----
Confidence 3455667788888889888877765544322223444567777777654433222110 00 000 0 00
Q ss_pred CCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccch-----hhhhhhhhHHHHHHHHHHHHHHHHHHHhcccCCC
Q psy8180 228 LQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSS-----EALHSLSTYYHIAAWGIPAVYAQLALALHHVSGD 302 (471)
Q Consensus 228 ~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~-----~~i~~~~~~~h~~aw~ip~i~tii~l~~~~v~~~ 302 (471)
.++..|.+.+++.+++..++..-.++++++=|+++.+-... ....++.....+++|.+++++++..+......++
T Consensus 107 ~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~ 186 (481)
T 3pbl_A 107 FSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGD 186 (481)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSS
T ss_pred cCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccCC
Confidence 23568999999999998888877799999999887532111 1112334567788999999999887765444322
Q ss_pred ceeeEEEeeeCCc
Q psy8180 303 ELTGLCYISEPAI 315 (471)
Q Consensus 303 ~~~g~CwI~~~~~ 315 (471)
...|.+....+
T Consensus 187 --~~~C~~~~~~~ 197 (481)
T 3pbl_A 187 --PTVCSISNPDF 197 (481)
T ss_dssp --TTCCSCCCHHH
T ss_pred --CCcccccCccH
Confidence 34687654433
No 18
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=98.07 E-value=0.00029 Score=73.75 Aligned_cols=134 Identities=6% Similarity=0.022 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHH----hcCCCCccccCCCCCCCCC
Q psy8180 145 KNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMK----SSLGPNALTCVTPPSPDAV 220 (471)
Q Consensus 145 ~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~----~~~g~~~i~C~~~~~g~r~ 220 (471)
.-.+.....+..++++++.++.++++.-+++..+-....++-+|++.+++.+..+.. .+.+. -
T Consensus 40 ~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~------------w- 106 (500)
T 2rh1_A 40 VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKM------------W- 106 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTS------------C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------C-
Confidence 334455667778888899988888876554432322445567777777765533221 11110 0
Q ss_pred ceeeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchhh--hhhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy8180 221 PYIAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSEA--LHSLSTYYHIAAWGIPAVYAQLALALH 297 (471)
Q Consensus 221 ~~~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~~--i~~~~~~~h~~aw~ip~i~tii~l~~~ 297 (471)
. .++..|.+.+++.+++..+++.-.++++++=|+++.+-..... ..++.....+++|+++++++++++...
T Consensus 107 --~----~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~ 179 (500)
T 2rh1_A 107 --T----FGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMH 179 (500)
T ss_dssp --C----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred --c----CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchhee
Confidence 0 1246799999999998888887779999999998864221111 134456677899999999987777543
No 19
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=97.94 E-value=0.0006 Score=71.78 Aligned_cols=151 Identities=13% Similarity=0.075 Sum_probs=95.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCce
Q psy8180 143 EDKNLVERWMRALSWLCFTSTLFTLLTFWVDGSRFRYPERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVPY 222 (471)
Q Consensus 143 ~~~~~~~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~~ 222 (471)
.+...+.....++.++++++.++.++++.-+++..+-....++-+|++.+++.+..+...+... .. .
T Consensus 61 ~~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~~-~~-------~----- 127 (520)
T 3v2y_A 61 NSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSG-AT-------T----- 127 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHSG-GG-------G-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHcc-cc-------c-----
Confidence 3335666777778888999998888877655543332244456777888887665544332210 00 0
Q ss_pred eeecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccchh--hhhhhhhHHHHHHHHHHHHHHHHHHHhcccC
Q psy8180 223 IAVDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANKWSSE--ALHSLSTYYHIAAWGIPAVYAQLALALHHVS 300 (471)
Q Consensus 223 ~~~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k~~~~--~i~~~~~~~h~~aw~ip~i~tii~l~~~~v~ 300 (471)
....+..|.+..++.+.+..++.+-.++++++=|+++. ..... .-.+......+++|.+++++++.++..-...
T Consensus 128 ---~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~ 203 (520)
T 3v2y_A 128 ---YKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI 203 (520)
T ss_dssp ---TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT
T ss_pred ---eeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc
Confidence 00234579999999999888888888999999999876 22111 1123455677889999999988777643332
Q ss_pred CCceeeEEEeee
Q psy8180 301 GDELTGLCYISE 312 (471)
Q Consensus 301 ~~~~~g~CwI~~ 312 (471)
.+ ...|....
T Consensus 204 ~~--~~~C~~~~ 213 (520)
T 3v2y_A 204 SA--LSSCSTVL 213 (520)
T ss_dssp TC--GGGBCSSS
T ss_pred cC--CCcccccC
Confidence 22 23687543
No 20
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=97.10 E-value=0.0054 Score=64.33 Aligned_cols=135 Identities=16% Similarity=0.067 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC----ChhHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCCCCceee
Q psy8180 149 ERWMRALSWLCFTSTLFTLLTFWVDGSRFRYP----ERPVIFIAFCYNLISFVMIMKSSLGPNALTCVTPPSPDAVPYIA 224 (471)
Q Consensus 149 ~~~~~v~s~ls~~~tlf~ilTF~i~~~r~~yp----~~~iifl~~c~~~~sl~~li~~~~g~~~i~C~~~~~g~r~~~~~ 224 (471)
..+..++.++++++.++.++++.-+++ .|.. .--|+-+|++.+++++..+-..+.. .+. ..+ . -.
T Consensus 36 ~~~~~~i~~~g~~gN~lvi~~i~~~~~-~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~--~~~----~~~-~---w~ 104 (510)
T 4grv_A 36 TAIYLALFVVGTVGNSVTLFTLARKKS-LQSLQSTVHYHLGSLALSDLLILLLAMPVELYN--FIW----VHH-P---WA 104 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTT----CCS-S---CS
T ss_pred HHHHHHHHHHHHHHHHHhhhheeeecC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH----hCC-C---EE
Confidence 333445566777888777776653332 2221 2234566777776655433211110 000 000 0 00
Q ss_pred ecCCCCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc--cchhhhhhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy8180 225 VDALQSPTCTFVFLVLYYLSMSAGIWWVILTLAWYLSAANK--WSSEALHSLSTYYHIAAWGIPAVYAQLALALH 297 (471)
Q Consensus 225 ~~g~~~~~C~~~~~l~~~f~laa~~Ww~il~~~w~l~~~~k--~~~~~i~~~~~~~h~~aw~ip~i~tii~l~~~ 297 (471)
.++..|.+.+++.+.+..++++-.++++++=|+++.+- .....-.++.....+++|.+++++.+.++...
T Consensus 105 ---~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~ 176 (510)
T 4grv_A 105 ---FGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTM 176 (510)
T ss_dssp ---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHE
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhh
Confidence 13467999999999998888888899999999987632 11111134456778899999999987766643
No 21
>3hkl_A Muscle, skeletal receptor tyrosine protein kinase; MUSK, receptor tyrosine kinase, frizzled CRD, ATP-binding, D bond, glycoprotein; HET: NAG; 2.10A {Rattus norvegicus}
Probab=96.18 E-value=0.0062 Score=55.41 Aligned_cols=87 Identities=22% Similarity=0.395 Sum_probs=57.7
Q ss_pred chHHHHHHHh--hhhhhcc--ccCCchhhhhhhccccccccccc-cCcccCCchhhHHHHhcC-CHhh---hh-------
Q psy8180 5 SMGFNRMYRL--QALMPLI--NSNCSRHIRFFLCSVYAPLCSEH-VIGAIPSCRGLCEDVKAD-CLPT---LT------- 68 (471)
Q Consensus 5 ~tQ~~~~~~l--~~~~~L~--~~~C~~~l~~fLCs~~~P~C~~~-~~~~i~PCrslC~~~~~~-C~~~---l~------- 68 (471)
.+|++++.++ ..|..|. ...|.+....+||...||.|.+. .+.|.+-||+.|+.+++. |..- ++
T Consensus 45 ~dp~~~~E~l~~aaw~el~~lS~~Cr~aAe~lLC~yaFP~Cd~~~gP~P~pLCREdC~alk~~~C~~Ew~~~e~~~~~G~ 124 (197)
T 3hkl_A 45 PDPEEAQELLIHTAWNELKAVSPLCRPAAEALLCNHLFQECSPGVLPTPMPICREYCLAVKELFCAKEWLAMEGKTHRGL 124 (197)
T ss_dssp SSHHHHHHHHHHHHHHHHTTSCTTTHHHHHHHHHHHHTCBBCSSSSCCBCCBCHHHHHHHHHTTTTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHhhCCCCCCCCCCCCcchhHHHHHHHHHHHhHHHHHHHHhcccccc
Confidence 4556555544 2355553 45899999999999999999762 235667799999999887 6422 11
Q ss_pred ---hcc-CCCCCCCCCCCCCCCC-CCCcccC
Q psy8180 69 ---ALN-FILPPLFNCSRFPVSE-NNGLCMQ 94 (471)
Q Consensus 69 ---~~~-~~wP~~l~C~~fP~~~-~~~~C~~ 94 (471)
..+ +.. -+|+.+|..+ +...|..
T Consensus 125 ~~~~~~~l~L---P~Ce~LP~~~~~~~~Ct~ 152 (197)
T 3hkl_A 125 YRSGMHFLPV---PECSKLPSMHQDPTACTR 152 (197)
T ss_dssp HHHTCCCCCC---CCGGGSCCTTTCTTSSBC
T ss_pred ccccccceeC---CchhhCCCCCCCCCccee
Confidence 111 333 4799999764 3445664
Done!