RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8181
(361 letters)
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 54.5 bits (132), Expect = 5e-11
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 282 VHTGEKPHECIYCQKRFSSTSNLKTHMRLHSG 313
+H+GEKP+ C+ C K FS +S L H R+H+G
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 51.1 bits (123), Expect = 1e-09
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 255 HNGERPFQCNICTKSFTQLAHLQKHHLVHTGE 286
H+GE+P+ C C K+F++ + L +H VHTGE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 45.7 bits (109), Expect = 8e-08
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 311 HSGQKPYHCEVCPARFTQYVHLKLHKRLHTNE 342
HSG+KPY C C F++ L H+R+HT E
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 42.2 bits (100), Expect = 1e-06
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 229 GKMHYECNVCYKTFGQLSNLKVHLRTHNGE 258
G+ Y C C K F + S L H R H GE
Sbjct: 4 GEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 30.3 bits (69), Expect = 0.020
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 339 HTNERPYVCKGCNKRYISLSGLR 361
H+ E+PY C C K + S L
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILV 24
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 54.7 bits (131), Expect = 9e-11
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 258 ERPFQCNICTKSFTQLAHLQKHHLVHTGEKPHECIYCQKRFSSTSNLKTHMRLH 311
++ + C C KSFT + +H +H G +P+ C C K+F +L HM++H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 51.6 bits (123), Expect = 1e-09
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 286 EKPHECIYCQKRFSSTSNLKTHMRLHSGQKPYHCEVCPARFTQYVHLKLHKRLH 339
+K + C C K F+ S HM +H G +PY C VC +F HL H ++H
Sbjct: 1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 48.5 bits (115), Expect = 1e-08
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNGERPFQCNICTKSFTQLAHLQKHHLVH 283
Y C C K+F S H+ H G RP+ C +C K F HL H +H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 37.7 bits (87), Expect = 9e-05
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 315 KPYHCEVCPARFTQYVHLKLHKRLHTNERPYVCKGCNKRYISLSGLR 361
K Y C+ C FT H +H RPY C C K++ L
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLV 47
Score = 33.5 bits (76), Expect = 0.002
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 219 SLPYPLKKKDGKMHYECNVCYKTFGQLSNLKVHLRTH 255
+ G Y C VC K F +L H++ H
Sbjct: 17 QRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 53.8 bits (130), Expect = 1e-10
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 284 TGEKPHECIYCQKRFSSTSNLKTHMRL-HSGQKPYHCEV 321
+ KP+ C C K FS +L H++ H+ ++P+ C+V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 51.1 bits (123), Expect = 1e-09
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 258 ERPFQCNICTKSFTQLAHLQKHH-LVHTGEKPHEC 291
+P+ C C K F++ HL H VHT E+PH+C
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 48.5 bits (116), Expect = 1e-08
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 312 SGQKPYHCEVCPARFTQYVHLKLH-KRLHTNERPYVCK 348
S KPY C+ C F++ HL H K++HT+ERP+ C+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 46.9 bits (112), Expect = 3e-08
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 233 YECNVCYKTFGQLSNLKVHLR-THNGERPFQCNI 265
Y C C K F + +L H++ H ERP +C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 24.6 bits (54), Expect = 3.0
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 342 ERPYVCKGCNKRYISLSGLR 361
+PY+C+ C K + L
Sbjct: 3 GKPYICQSCGKGFSRPDHLN 22
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 50.4 bits (121), Expect = 2e-09
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 253 RTHNGERPFQCNICTKSFTQLAHLQKHHLVHTGEK 287
RTH GE+P+ C+ C K+F Q L H +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 49.7 bits (119), Expect = 3e-09
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 282 VHTGEKPHECIYCQKRFSSTSNLKTHMRLHSGQK 315
HTGEKP+ C +C K F L H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 46.2 bits (110), Expect = 5e-08
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 309 RLHSGQKPYHCEVCPARFTQYVHLKLHKRLHTNE 342
R H+G+KPY C C F Q L +H + + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 40.8 bits (96), Expect = 5e-06
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 229 GKMHYECNVCYKTFGQLSNLKVHLRTHNGE 258
G+ Y C+ C KTF Q L +H + ++
Sbjct: 5 GEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 30.8 bits (70), Expect = 0.017
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 337 RLHTNERPYVCKGCNKRYISLSGLR 361
R HT E+PY C C+K + L
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLD 25
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 50.4 bits (121), Expect = 2e-09
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 253 RTHNGERPFQCNICTKSFTQLAHLQKHHLVHTGEK 287
RTH+GE+P++C IC FTQ ++ H L E
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 46.1 bits (110), Expect = 5e-08
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 282 VHTGEKPHECIYCQKRFSSTSNLKTHMRLHSGQK 315
H+GEKP+EC C RF+ + +K H+ +
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 42.7 bits (101), Expect = 9e-07
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 309 RLHSGQKPYHCEVCPARFTQYVHLKLHK-RLHTNE 342
R HSG+KPY C +C ARFTQ +K+H + HT
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 35.3 bits (82), Expect = 4e-04
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 229 GKMHYECNVCYKTFGQLSNLKVHLRTHNGE 258
G+ YEC +C+ F Q +K+H+ + E
Sbjct: 5 GEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 31.9 bits (73), Expect = 0.008
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 337 RLHTNERPYVCKGCNKRYISLSGLR 361
R H+ E+PY C C+ R+ ++
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMK 25
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 49.8 bits (119), Expect = 3e-09
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 278 KHHLVHTGEKPHECIYCQKRFSSTSNLKTHMRLHSG 313
+ + ++C C K FS +S+L H R H+G
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 49.4 bits (118), Expect = 5e-09
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 251 HLRTHNGERPFQCNICTKSFTQLAHLQKHHLVHTGE 286
R ++C+ C KSF+ + L KH HTGE
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 47.8 bits (114), Expect = 1e-08
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 307 HMRLHSGQKPYHCEVCPARFTQYVHLKLHKRLHTNE 342
++ Y C+ C F+ L H+R HT E
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 36.3 bits (84), Expect = 2e-04
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 229 GKMHYECNVCYKTFGQLSNLKVHLRTHNGE 258
+ Y+C+ C K+F S+L H RTH GE
Sbjct: 9 ERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 30.5 bits (69), Expect = 0.023
Identities = 7/27 (25%), Positives = 9/27 (33%)
Query: 335 HKRLHTNERPYVCKGCNKRYISLSGLR 361
+ R Y C C K + S L
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLS 29
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 47.2 bits (113), Expect = 2e-08
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 259 RPFQCNICTKSFTQLAHLQKHHLVHTGEK 287
R F C +CT++F + HL++H+ HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 44.5 bits (106), Expect = 2e-07
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 287 KPHECIYCQKRFSSTSNLKTHMRLHSGQK 315
+ C C + F+ +LK H R H+ +K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 43.0 bits (102), Expect = 6e-07
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNGER 259
+ C VC + F + +LK H R+H E+
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 41.8 bits (99), Expect = 2e-06
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 315 KPYHCEVCPARFTQYVHLKLHKRLHTNER 343
+ + CEVC F + HLK H R HTNE+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 46.6 bits (111), Expect = 3e-08
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 251 HLRTHNGERPFQCNICTKSFTQLAHLQKHHLVHTG 285
R G +PFQC C +SF++ HL H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 46.6 bits (111), Expect = 4e-08
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 279 HHLVHTGEKPHECIYCQKRFSSTSNLKTHMRLH 311
TG KP +C C + FS + +L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 44.0 bits (104), Expect = 3e-07
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 307 HMRLHSGQKPYHCEVCPARFTQYVHLKLHKRLHTN 341
R +G KP+ C C F++ HL LH++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 35.1 bits (81), Expect = 5e-04
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 229 GKMHYECNVCYKTFGQLSNLKVHLRTH 255
G ++C C ++F + +L +H + H
Sbjct: 8 GIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.6 bits (72), Expect = 0.008
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 335 HKRLHTNERPYVCKGCNKRYISLSGLR 361
R T +P+ C C++ + L
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLA 28
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 45.1 bits (107), Expect = 1e-07
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 261 FQCN--ICTKSFTQLAHLQKHHLVHTGEKPHECIY 293
F C C KSF HL++H +H+ + + C +
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 45.1 bits (107), Expect = 1e-07
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 233 YECN--VCYKTFGQLSNLKVHLRTHNGERPFQC 263
+ C C K+F +LK H++ H+ R + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 44.3 bits (105), Expect = 3e-07
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 290 ECIYCQKRFSSTSNLKTHMRLHSGQKPYHCE 320
C K F+ +LK HM+LHS + Y CE
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 40.5 bits (95), Expect = 5e-06
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 317 YHCE--VCPARFTQYVHLKLHKRLHTNERPYVCK 348
+ C C F HLK H +LH++ R Y+C+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 45.7 bits (108), Expect = 1e-07
Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 278 KHHLVHTGEKPHECIYCQ--KRFSSTSNLKTHMRLHSGQK 315
++ +K EC++ K F N+++H++ H +
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 39.5 bits (92), Expect = 2e-05
Identities = 6/44 (13%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 302 SNLKTHMRLHSGQKPYHCEVCPA--RFTQYVHLKLHKRLHTNER 343
++ +++ K + C F + +++ H + H +R
Sbjct: 5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 38.4 bits (89), Expect = 4e-05
Identities = 6/44 (13%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 246 SNLKVHLRTHNGERPFQCNICT--KSFTQLAHLQKHHLVHTGEK 287
++ +++ ++ F+C K+F + +++ H H ++
Sbjct: 5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 29.1 bits (65), Expect = 0.070
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 226 KKDGKMHYECNVCY--KTFGQLSNLKVHLRTHNGER 259
K+ +EC KTF + N++ H++TH +R
Sbjct: 12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 44.5 bits (106), Expect = 2e-07
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 286 EKPHECIYCQKRFSSTSNLKTHMRLHSG 313
+KP +C C + FS + +L TH+R H+G
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 43.8 bits (104), Expect = 4e-07
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 258 ERPFQCNICTKSFTQLAHLQKHHLVHTG 285
++PFQC IC ++F++ HL H HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 39.5 bits (93), Expect = 1e-05
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNG 257
++C +C + F + +L H+RTH G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 37.2 bits (87), Expect = 7e-05
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 314 QKPYHCEVCPARFTQYVHLKLHKRLHT 340
QKP+ C +C F++ HL H R HT
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHT 27
Score = 24.9 bits (55), Expect = 1.9
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 342 ERPYVCKGCNKRYISLSGLR 361
++P+ C+ C + + L
Sbjct: 1 QKPFQCRICMRNFSRSDHLT 20
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 44.0 bits (104), Expect = 4e-07
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 283 HTGEKPHECIYCQKRFSSTSNLKTHMRLHSG 313
+G++P C C F++ +N H+++H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 43.6 bits (103), Expect = 5e-07
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 311 HSGQKPYHCEVCPARFTQYVHLKLHKRLHTNE 342
SG++P+ C +C + FT + H ++HT+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 43.2 bits (102), Expect = 7e-07
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 255 HNGERPFQCNICTKSFTQLAHLQKHHLVHTGE 286
+G+RPF C IC +FT A+ +H VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 33.2 bits (76), Expect = 0.002
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 229 GKMHYECNVCYKTFGQLSNLKVHLRTHNGE 258
GK + C +C F +N HL+ H
Sbjct: 4 GKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 24.3 bits (53), Expect = 3.1
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 339 HTNERPYVCKGCNKRYISLSGLR 361
+ +RP+VC+ C + + +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCA 24
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 43.1 bits (102), Expect = 5e-07
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 259 RPFQCNICTKSFTQLAHLQKHHLVHTGEK 287
+ F C C K F + HL KH H +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 42.7 bits (101), Expect = 7e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 287 KPHECIYCQKRFSSTSNLKTHMRLHSGQK 315
K C C KRF + +L H++ H +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 41.6 bits (98), Expect = 2e-06
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNGER 259
+ C C K F + +L H++TH ++
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 40.8 bits (96), Expect = 3e-06
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 315 KPYHCEVCPARFTQYVHLKLHKRLHTNER 343
K + C CP RF + HL H + H N++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 41.9 bits (99), Expect = 2e-06
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 259 RPFQCNI--CTKSFTQLAHLQKHHLVHTGEK 287
RPF C C K FT+ LQ+H HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 40.4 bits (95), Expect = 5e-06
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 287 KPHECIY--CQKRFSSTSNLKTHMRLHSGQK 315
+P C + C KRF+ + L+ H R H+G+K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 38.5 bits (90), Expect = 3e-05
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 233 YECNV--CYKTFGQLSNLKVHLRTHNGER 259
+ C C K F + L+ H RTH GE+
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 35.4 bits (82), Expect = 3e-04
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 315 KPYHCEV--CPARFTQYVHLKLHKRLHTNER 343
+P+ C C RFT+ L+ HKR HT E+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 39.2 bits (92), Expect = 1e-05
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 259 RPFQCNI--CTKSFTQLAHLQKHHLVHTGE 286
+P +C C KS+++L +L+ H HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 38.5 bits (90), Expect = 3e-05
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 287 KPHECIY--CQKRFSSTSNLKTHMRLHSGQ 314
KPH+C + C+K +S NLKTH+R H+G+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 37.7 bits (88), Expect = 5e-05
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 233 YECNV--CYKTFGQLSNLKVHLRTHNGE 258
++C C K++ +L NLK HLR+H GE
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 34.2 bits (79), Expect = 8e-04
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 315 KPYHC--EVCPARFTQYVHLKLHKRLHTNE 342
KP+ C E C +++ +LK H R HT E
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 38.8 bits (91), Expect = 2e-05
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 286 EKPHECIY--CQKRFSSTSNLKTHMRLHSGQ 314
++P+ C + C K F +L H + H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 38.1 bits (89), Expect = 3e-05
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 258 ERPFQCNI--CTKSFTQLAHLQKHHLVHTGE 286
+RP+ C+ C K+F + L +H H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 33.8 bits (78), Expect = 0.001
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 233 YECNV--CYKTFGQLSNLKVHLRTHNGE 258
Y C+ C K F + +L H ++H +
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 33.1 bits (76), Expect = 0.002
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 315 KPYHCEV--CPARFTQYVHLKLHKRLHTNE 342
+PY C+ C F + L HK+ H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 37.7 bits (88), Expect = 4e-05
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 259 RPFQCNI--CTKSFTQLAHLQKHHLVHTGE 286
+PFQC C K F+ +L+ H +HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 35.8 bits (83), Expect = 2e-04
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 233 YECNV--CYKTFGQLSNLKVHLRTHNGE 258
++C C K F NL+ H+R H G+
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 35.4 bits (82), Expect = 4e-04
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 287 KPHECIY--CQKRFSSTSNLKTHMRLHSGQ 314
KP +C + C KRFS NL+TH+R+H+G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 32.3 bits (74), Expect = 0.004
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 315 KPYHCEV--CPARFTQYVHLKLHKRLHTNE 342
KP+ C C RF+ +L+ H R+HT +
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 36.9 bits (86), Expect = 8e-05
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 287 KPHECIY--CQKRFSSTSNLKTHMRLHSG 313
+P+ C C +RFS +++L H+R+H+G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 36.5 bits (85), Expect = 1e-04
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 259 RPFQCNI--CTKSFTQLAHLQKHHLVHTG 285
RP+ C + C + F++ A L +H +HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 34.2 bits (79), Expect = 8e-04
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 233 YECNV--CYKTFGQLSNLKVHLRTHNG 257
Y C V C + F + ++L H+R H G
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 31.5 bits (72), Expect = 0.007
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 315 KPYHC--EVCPARFTQYVHLKLHKRLHT 340
+PY C E C RF++ L H R+HT
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHT 28
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 36.4 bits (85), Expect = 1e-04
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 259 RPFQCNICTKSFTQLAHLQKHHLVHT 284
+P++C C K+F+Q + L H +HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 35.3 bits (82), Expect = 3e-04
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTH 255
Y+C C K F Q S L H R H
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIH 25
Score = 34.5 bits (80), Expect = 6e-04
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 287 KPHECIYCQKRFSSTSNLKTHMRLHS 312
KP++C+ C K FS S L H R+H+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 34.1 bits (79), Expect = 0.001
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 315 KPYHCEVCPARFTQYVHLKLHKRLHT 340
KPY C C F+Q L H+R+HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 34.6 bits (80), Expect = 6e-04
Identities = 10/28 (35%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 287 KPHECIY--CQKRFSSTSNLKTHMRLHS 312
+P+ C + C K+F+ ++NLK+H+ H+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 33.5 bits (77), Expect = 0.002
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 259 RPFQCNI--CTKSFTQLAHLQKHHLVHT 284
RP+ C C K F Q +L+ H L H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 30.4 bits (69), Expect = 0.017
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 315 KPYHCEV--CPARFTQYVHLKLHKRLHT 340
+PY C C +F Q +LK H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 30.4 bits (69), Expect = 0.020
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 233 YECNV--CYKTFGQLSNLKVHLRTH 255
Y C C K F Q +NLK H+ TH
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTH 27
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 34.2 bits (78), Expect = 0.001
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 263 CNICTKSFTQLAHLQKHHLVHTGE 286
C C K+F + + L++H LVHTGE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
Score = 28.0 bits (62), Expect = 0.15
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 289 HECIYCQKRFSSTSNLKTHMRLHSGQ 314
H C C K F +S LK H +H+G+
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 25.0 bits (54), Expect = 1.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 235 CNVCYKTFGQLSNLKVHLRTHNGE 258
C C K F + S LK H H GE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 33.1 bits (75), Expect = 0.003
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 263 CNICTKSFTQLAHLQKHHLVHTGEKPH 289
C IC K F + HL +H L H+GEKP+
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 29.3 bits (65), Expect = 0.059
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 314 QKPYHCEVCPARFTQYVHLKLHKRLHTNERPY 345
+K CE+C F HL HK H+ E+PY
Sbjct: 3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 27.7 bits (61), Expect = 0.23
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 287 KPHECIYCQKRFSSTSNLKTHMRLHSGQKPY 317
K C C K F +L H HSG+KPY
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.9 bits (59), Expect = 0.36
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 230 KMHYECNVCYKTFGQLSNLKVHLRTHNGERPF 261
+ C +C K F + +L H +H+GE+P+
Sbjct: 3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 32.3 bits (73), Expect = 0.003
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 288 PHECIYCQKRFSSTSNLKTHMRLHSG 313
PH+C C K FS LKTHMR H+G
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 27.0 bits (59), Expect = 0.34
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNG 257
++C VC K F + LK H+R H G
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 25.0 bits (54), Expect = 1.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 316 PYHCEVCPARFTQYVHLKLHKRLHT 340
P+ CEVC F++ LK H R HT
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHT 25
Score = 23.5 bits (50), Expect = 6.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 260 PFQCNICTKSFTQLAHLQKHHLVHTG 285
P +C +C K F++ L+ H HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 31.2 bits (70), Expect = 0.012
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 259 RPFQCNI--CTKSFTQLAHLQKHHLVHTGE 286
+PF C C K FT L HL +H L HTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 29.8 bits (67), Expect = 0.035
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 258 ERPFQCNICTKSFTQLAHLQKHHLVH 283
E+PF C+IC + F + ++H +H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 29.4 bits (66), Expect = 0.039
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 286 EKPHECIYCQKRFSSTSNLKTHMRLH 311
EKP C C ++F+ + K H ++H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 27.1 bits (60), Expect = 0.33
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 314 QKPYHCEVCPARFTQYVHLKLHKRLH 339
+KP+ C++C +F + K H ++H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 30.8 bits (70), Expect = 0.035
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 285 GEKPHECIYCQKRFSSTSNLKTHMR 309
G H C+ C + F ++NLKTH R
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFR 36
Score = 25.0 bits (55), Expect = 3.2
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 227 KDGKMHYECNVCYKTFGQLSNLKVHLRT 254
G + C C + F +NLK H R+
Sbjct: 10 LPGGGLHRCLACARYFIDSTNLKTHFRS 37
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 29.7 bits (67), Expect = 0.039
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 287 KPHECIYCQKRFSSTSNLKTHMRLH 311
+ + C +C++ F S L HM +H
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVH 28
Score = 25.4 bits (56), Expect = 1.3
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNGER 259
Y C+ C + F L H+ H +R
Sbjct: 6 YTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 25.4 bits (56), Expect = 1.5
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 314 QKPYHCEVCPARFTQYVHLKLHKRLHTNER 343
+ Y C C F L H +H +R
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR 32
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 28.9 bits (64), Expect = 0.078
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 258 ERPFQCNICTKSFTQLAHLQKHHLVHTGE 286
E+ F C++C ++F + L+ H + HTGE
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 28.2 bits (62), Expect = 0.12
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNGE 258
+ C+VC +TF + L++H+ +H GE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 24.7 bits (53), Expect = 2.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 286 EKPHECIYCQKRFSSTSNLKTHMRLHSGQ 314
E+ C CQ+ F L+ HM H+G+
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 23.5 bits (50), Expect = 5.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 314 QKPYHCEVCPARFTQYVHLKLHKRLHTNE 342
++ + C VC F + + L+LH HT E
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 28.5 bits (63), Expect = 0.10
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 286 EKPHECIYCQKRFSSTSNLKTHMRLHSG 313
EKP+ C C RF + H+R H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 23.8 bits (51), Expect = 4.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 314 QKPYHCEVCPARFTQYVHLKLHKRLH 339
+KPY C VC RF + + H R H
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSH 26
Score = 23.5 bits (50), Expect = 5.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNG 257
Y C VC F + + H+R+H+G
Sbjct: 4 YSCPVCGLRFKRKDRMSYHVRSHDG 28
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 28.6 bits (63), Expect = 0.10
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 287 KPHECIYCQKRFSSTSNLKTHMR 309
K ++C YC+ R + +SNLKTH++
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIK 23
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 27.7 bits (61), Expect = 0.17
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 234 ECNVCYKTFGQLSNLKVHLRTHNGER 259
EC C+K F LKVH R H GE+
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 26.2 bits (57), Expect = 0.69
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 262 QCNICTKSFTQLAHLQKHHLVHTGEK 287
+C C K F +L+ H+ HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 25.8 bits (56), Expect = 0.96
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 290 ECIYCQKRFSSTSNLKTHMRLHSGQK 315
EC C K+F S LK H R H+G+K
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 24.3 bits (52), Expect = 3.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 318 HCEVCPARFTQYVHLKLHKRLHTNER 343
C C +F +LK+H R HT E+
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 27.9 bits (62), Expect = 0.20
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 256 NGERPFQCNI--CTKSFTQLAHLQKHHLVHT 284
+ ++PF C C + FT HL H H
Sbjct: 2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
Score = 24.5 bits (53), Expect = 2.8
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 314 QKPYHCEV--CPARFTQYVHLKLHKRLHT 340
KP+ C C RFT HL +HK H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 27.0 bits (59), Expect = 0.33
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 287 KPHECIYCQKRFSSTSNLKTHMRLHS 312
KP++C C + +S+L H+R+HS
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 26.3 bits (58), Expect = 0.67
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 260 PFQCNICTKSFTQ----LAHLQKHHLVHTGE 286
P+ C +C ++FT+ + H QK H + GE
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHSGNLGE 31
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 27.9 bits (62), Expect = 0.88
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Query: 285 GEKPHE-----CIYCQKRFSSTSNLKTHMR 309
GE H C++C + F+S +H +
Sbjct: 7 GEPAHGRQHTPCLFCDRLFASAEETFSHCK 36
>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 37
Score = 25.8 bits (56), Expect = 1.1
Identities = 7/28 (25%), Positives = 19/28 (67%)
Query: 254 THNGERPFQCNICTKSFTQLAHLQKHHL 281
T GE ++C +C++ +T +++ +H++
Sbjct: 2 TKEGEHTYRCKVCSRVYTHISNFCRHYV 29
Score = 24.6 bits (53), Expect = 3.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 227 KDGKMHYECNVCYKTFGQLSNLKVHLRT 254
K+G+ Y C VC + + +SN H T
Sbjct: 3 KEGEHTYRCKVCSRVYTHISNFCRHYVT 30
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 25.4 bits (55), Expect = 1.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 286 EKPHECIYCQKRFSSTSNLKTHMRLHSG 313
E+P +C C ++S L H+R H+G
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTG 28
Score = 24.6 bits (53), Expect = 2.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 258 ERPFQCNICTKSFTQLAHLQKHHLVHTGE 286
ERPF+C IC + + L H HTG+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 23.8 bits (51), Expect = 4.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 314 QKPYHCEVCPARFTQYVHLKLHKRLHTNE 342
++P+ C++CP L +H R HT +
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 23.5 bits (50), Expect = 5.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNGE 258
++C +C S L VHLR+H G+
Sbjct: 4 FKCQICPYASRNSSQLTVHLRSHTGD 29
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 24.7 bits (53), Expect = 2.1
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 261 FQCNICTKSFTQLAHLQKHHLVH 283
++C +C +SF + + L +H VH
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 22.8 bits (48), Expect = 9.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTH 255
Y+C +C ++F + S L H R H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 24.4 bits (53), Expect = 2.6
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 291 CIYCQKRFSSTSNLKTHMRLHSGQK 315
C C R S LK H+R H+ +
Sbjct: 4 CEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 23.7 bits (51), Expect = 4.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 233 YECNVCYKTFGQLSNLKVHLRTHNGER 259
Y C C + S LK H+RTH R
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 24.3 bits (53), Expect = 2.7
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 290 ECIYCQKRFSSTSNLKTHMRLHSGQ 314
C + F + L HMR H+G+
Sbjct: 9 GCSRELRPFKAQYMLVVHMRRHTGE 33
Score = 23.9 bits (52), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 234 ECNVCYKTFGQLSNLKVHLRTHNGE 258
C+ + F L VH+R H GE
Sbjct: 9 GCSRELRPFKAQYMLVVHMRRHTGE 33
>d2ia7a1 d.373.1.1 (A:23-133) Uncharacterized protein GSU0986
{Geobacter sulfurreducens [TaxId: 35554]}
Length = 111
Score = 26.0 bits (57), Expect = 3.0
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 247 NLKVHLRTHNGERPFQCNI 265
++++ L T GER + +
Sbjct: 14 SIRIILGTARGERVMRPDF 32
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 24.7 bits (53), Expect = 3.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 284 TGEKPHECIYCQKRF 298
TG KP+EC C KRF
Sbjct: 1 TGIKPYECNICAKRF 15
Score = 23.2 bits (49), Expect = 9.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 257 GERPFQCNICTKSFTQLAHLQKH 279
G +P++CNIC K F +H
Sbjct: 2 GIKPYECNICAKRFMWRDSFHRH 24
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 27.3 bits (60), Expect = 3.1
Identities = 11/90 (12%), Positives = 26/90 (28%), Gaps = 10/90 (11%)
Query: 8 FDQEKEVHSTSPPPPPSSPGDNLMIVES----PSPSDMVPQPVCKAPTSILENILMRSKA 63
F + + P M+ + P D+ Q L+++++ + A
Sbjct: 5 FSEPVRLVEKYPAGRDGDLKKKHMLCVNWLLSEKPLDLQTQLAL----GFLDHLMLGTPA 60
Query: 64 ENVQKELRH--IPSLNSPPSSPTEMAYSYK 91
++K L + E+
Sbjct: 61 SPLRKILLESGLGEALVSSGLSDELLQPQF 90
>d1jroa1 a.56.1.1 (A:85-166) Xanthine dehydrogenase chain A, domain
2 {Rhodobacter capsulatus [TaxId: 1061]}
Length = 82
Score = 25.7 bits (56), Expect = 3.2
Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 5/85 (5%)
Query: 243 GQLSNLKVHLRTHNGERPFQCNICTKSFTQLAHLQKHHLVHTGEKPHECIYCQKRFSSTS 302
G+L ++ + H+G QC CT F + C R + +
Sbjct: 2 GRLHPVQQAMIDHHG---SQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLC--RCTGYA 56
Query: 303 NLKTHMRLHSGQKPYHCEVCPARFT 327
+ +G+ P A FT
Sbjct: 57 PILRAAEAAAGEPPADWLQADAAFT 81
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 24.0 bits (52), Expect = 3.7
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Query: 343 RPYVCK--GCNKRYISLSGLR 361
+PYVCK GC KRY S LR
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLR 21
Score = 22.9 bits (49), Expect = 9.9
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 287 KPHECIY--CQKRFSSTSNLKTHMRLHSG 313
KP+ C C KR++ S+L+ H++ G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 67
Score = 25.0 bits (54), Expect = 3.8
Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 10/66 (15%)
Query: 289 HECIYCQKRFSSTSNLKTHMRLHSGQKPYHCEVCPARFTQYVHLKLHKRLHTNERPYVCK 348
C+ C K+FS + + H G C+ + L +++ + VC
Sbjct: 6 DACMICSKKFSLLN--RKHHCRSCGG--VFCQEHSSNSIPLPDLGIYEPVR------VCD 55
Query: 349 GCNKRY 354
C + Y
Sbjct: 56 SCFEDY 61
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 23.8 bits (51), Expect = 4.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 259 RPFQCNICTKSFTQLAHLQKH 279
RPF+CN C+ Q ++L KH
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKH 21
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 24.8 bits (54), Expect = 4.7
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 340 TNERPYVCKGCNKRYISL 357
TN + C C+ + L
Sbjct: 10 TNRASFKCPVCSSTFTDL 27
Score = 24.4 bits (53), Expect = 6.5
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 248 LKVHLRTHNGERPFQCNICTKSFTQL 273
++ R F+C +C+ +FT L
Sbjct: 2 IETDERDSTNRASFKCPVCSSTFTDL 27
>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein
1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 60
Score = 24.5 bits (53), Expect = 5.2
Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 3/24 (12%)
Query: 235 CNVCYKTF---GQLSNLKVHLRTH 255
C +C G SNL HL +
Sbjct: 25 CRICMAQIAYSGNTSNLSYHLEKN 48
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 59
Score = 24.0 bits (52), Expect = 6.3
Identities = 14/65 (21%), Positives = 17/65 (26%), Gaps = 19/65 (29%)
Query: 286 EKPHECIYCQKRFSSTSNLKTHMRLHSGQKPYHCEVCPARFTQYVHLKLHKRLHTNERPY 345
C CQ Y C VC F + +H LH+
Sbjct: 13 NGERFCYGCQGELKDQH-------------VYVCAVCQNVFCVDCDVFVHDSLHS----- 54
Query: 346 VCKGC 350
C GC
Sbjct: 55 -CPGC 58
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 25.1 bits (54), Expect = 7.7
Identities = 10/74 (13%), Positives = 22/74 (29%), Gaps = 13/74 (17%)
Query: 285 GEKPHECIYCQKRFSSTSNLKTHMRLHSGQKPYHCEVCPARFTQYVHLKLHKRLHTNERP 344
G+ + CI C ++ + CE C ++ +
Sbjct: 45 GDGVNRCILCGEQLGMLGS-----------ASVVCEDCKKNVCTKCGVETS--NNRPHPV 91
Query: 345 YVCKGCNKRYISLS 358
++CK C ++
Sbjct: 92 WLCKICLEQREVWK 105
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 23.8 bits (51), Expect = 7.7
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 261 FQCNICTKSFTQLAHLQKHHLVH 283
C +C K FT L++H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 24.3 bits (52), Expect = 7.9
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 215 RGYRSLPYPLKKKDGKMHYECNVCYKTFGQLSNLKVHLRTHNGE 258
R + L + Y+C C + L HL HN E
Sbjct: 3 RDFIILGNGPR--LQNSTYQCKHCDSKLQSTAELTSHLNIHNEE 44
>d1ny8a_ d.52.6.1 (A:) Hypothetical protein YrbA {Escherichia coli
[TaxId: 562]}
Length = 97
Score = 24.8 bits (54), Expect = 8.9
Identities = 5/33 (15%), Positives = 12/33 (36%)
Query: 251 HLRTHNGERPFQCNICTKSFTQLAHLQKHHLVH 283
+ FQ + F ++ ++K V+
Sbjct: 23 EVHVSGDGSHFQVIAVGELFDGMSRVKKQQTVY 55
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.130 0.403
Gapped
Lambda K H
0.267 0.0514 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,354,704
Number of extensions: 63685
Number of successful extensions: 403
Number of sequences better than 10.0: 1
Number of HSP's gapped: 395
Number of HSP's successfully gapped: 203
Length of query: 361
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 275
Effective length of database: 1,226,816
Effective search space: 337374400
Effective search space used: 337374400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 53 (24.7 bits)