Query psy8182
Match_columns 827
No_of_seqs 255 out of 385
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 20:41:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qgr_A Protein (importin beta 99.1 7.3E-06 2.5E-10 99.3 51.4 595 168-824 188-872 (876)
2 2bpt_A Importin beta-1 subunit 99.0 2.7E-05 9.3E-10 94.1 50.8 253 169-439 196-483 (861)
3 1b3u_A Protein (protein phosph 98.9 4.6E-06 1.6E-10 96.0 40.0 128 303-441 105-235 (588)
4 4fdd_A Transportin-1; heat rep 98.8 6.9E-05 2.4E-09 91.4 45.3 536 169-777 189-785 (852)
5 1w63_A Adapter-related protein 98.8 3.3E-05 1.1E-09 91.3 40.0 471 262-822 54-576 (618)
6 2vgl_B AP-2 complex subunit be 98.7 3.1E-06 1.1E-10 99.5 27.4 159 262-441 33-192 (591)
7 1b3u_A Protein (protein phosph 98.7 8.7E-05 3E-09 85.3 38.3 123 307-439 148-272 (588)
8 1qgr_A Protein (importin beta 98.6 0.0013 4.5E-08 79.4 49.2 579 169-824 145-828 (876)
9 2vgl_A Adaptor protein complex 98.6 3.4E-05 1.2E-09 91.3 32.9 466 262-823 58-550 (621)
10 4fdd_A Transportin-1; heat rep 98.6 7.3E-05 2.5E-09 91.1 36.8 206 221-439 61-286 (852)
11 1u6g_C TIP120 protein, CAND1; 98.4 0.0037 1.3E-07 79.2 44.8 173 630-823 859-1035(1230)
12 2bpt_A Importin beta-1 subunit 98.3 0.019 6.4E-07 69.1 55.4 426 325-823 227-711 (861)
13 1ibr_B P95, importin beta-1 su 98.2 0.0012 4.1E-08 73.3 30.8 135 297-440 13-161 (462)
14 1u6g_C TIP120 protein, CAND1; 98.1 0.017 6E-07 73.1 43.2 135 305-441 68-207 (1230)
15 1w63_A Adapter-related protein 97.9 0.034 1.2E-06 65.4 37.7 390 369-824 107-541 (618)
16 2x1g_F Cadmus; transport prote 97.7 0.1 3.5E-06 64.3 39.5 126 303-439 439-573 (971)
17 2vgl_B AP-2 complex subunit be 97.4 0.066 2.3E-06 62.5 30.2 204 220-437 61-267 (591)
18 1wa5_C Importin alpha RE-expor 97.4 0.54 1.8E-05 57.9 48.7 249 166-439 258-526 (960)
19 2qk2_A LP04448P; mini spindles 97.4 0.0037 1.3E-07 64.2 16.5 108 327-440 20-129 (242)
20 1ibr_B P95, importin beta-1 su 97.3 0.0032 1.1E-07 69.7 16.6 234 170-419 190-461 (462)
21 2qk2_A LP04448P; mini spindles 97.3 0.0056 1.9E-07 62.7 16.5 125 303-439 79-206 (242)
22 2x19_B Importin-13; nuclear tr 97.1 0.43 1.5E-05 58.5 33.5 128 303-440 425-558 (963)
23 3ltm_A Alpha-REP4; protein eng 96.9 0.044 1.5E-06 54.3 18.5 183 207-441 24-206 (211)
24 2qk1_A Protein STU2; STU2P, XM 96.9 0.0093 3.2E-07 62.1 13.6 113 327-443 21-139 (249)
25 2db0_A 253AA long hypothetical 96.6 0.2 6.9E-06 49.6 19.3 193 226-438 50-246 (253)
26 1oyz_A Hypothetical protein YI 96.4 0.11 3.8E-06 53.8 18.1 113 301-436 107-219 (280)
27 4hxt_A De novo protein OR329; 96.4 0.17 5.9E-06 50.7 18.7 137 297-442 98-245 (252)
28 3ltj_A Alpharep-4; protein eng 96.4 0.11 3.6E-06 51.1 16.6 180 204-436 16-196 (201)
29 3tjz_B Coatomer subunit gamma; 96.0 0.095 3.3E-06 57.5 15.4 175 247-440 25-207 (355)
30 2jdq_A Importin alpha-1 subuni 95.9 0.22 7.6E-06 54.7 18.1 215 203-439 108-348 (450)
31 2x1g_F Cadmus; transport prote 95.8 2.7 9.3E-05 51.5 29.0 89 728-823 439-535 (971)
32 3ltj_A Alpharep-4; protein eng 95.6 0.17 5.9E-06 49.5 14.0 89 323-436 77-165 (201)
33 3ltm_A Alpha-REP4; protein eng 95.2 0.5 1.7E-05 46.5 16.1 89 323-436 82-170 (211)
34 2db0_A 253AA long hypothetical 95.1 0.074 2.5E-06 52.7 9.2 110 275-398 137-246 (253)
35 2qk1_A Protein STU2; STU2P, XM 95.1 0.16 5.6E-06 52.6 12.5 113 324-441 62-178 (249)
36 1te4_A Conserved protein MTH18 95.0 0.038 1.3E-06 51.0 6.7 87 324-435 44-130 (131)
37 2jdq_A Importin alpha-1 subuni 94.8 0.81 2.8E-05 50.1 17.9 136 298-441 247-393 (450)
38 4hxt_A De novo protein OR329; 94.7 1.3 4.3E-05 44.2 17.9 110 324-441 88-202 (252)
39 3b2a_A TON_1937, putative unch 94.6 2.6 8.9E-05 43.4 19.4 186 310-511 25-214 (265)
40 2of3_A ZYG-9; multifunctional 94.5 0.17 5.9E-06 53.2 10.9 122 303-439 109-237 (266)
41 4db8_A Armadillo-repeat protei 94.3 0.24 8.4E-06 50.0 11.3 110 323-441 97-212 (252)
42 4db6_A Armadillo repeat protei 94.0 0.31 1.1E-05 47.7 11.2 135 298-441 25-170 (210)
43 3tjz_B Coatomer subunit gamma; 93.9 1 3.5E-05 49.3 15.8 138 283-441 27-171 (355)
44 1wa5_B Importin alpha subunit; 93.8 11 0.00038 42.5 34.4 114 322-441 87-205 (530)
45 1oyz_A Hypothetical protein YI 93.5 1 3.5E-05 46.4 14.5 88 330-436 99-186 (280)
46 4db6_A Armadillo repeat protei 93.4 0.51 1.8E-05 46.1 11.6 105 323-436 97-207 (210)
47 4db8_A Armadillo-repeat protei 93.4 0.79 2.7E-05 46.1 13.2 112 323-441 55-170 (252)
48 4b8j_A Importin subunit alpha- 93.4 13 0.00043 41.9 33.9 116 322-441 74-192 (528)
49 2vgl_A Adaptor protein complex 93.3 0.15 5.3E-06 59.9 8.6 119 687-824 58-178 (621)
50 1wa5_B Importin alpha subunit; 93.2 3.2 0.00011 47.0 19.4 220 203-440 131-372 (530)
51 3gs3_A Symplekin, LD45768P; he 93.2 3.4 0.00012 43.0 17.8 128 276-439 47-174 (257)
52 4b8j_A Importin subunit alpha- 92.7 2.6 8.7E-05 47.7 17.5 135 298-441 173-318 (528)
53 1te4_A Conserved protein MTH18 92.0 0.036 1.2E-06 51.1 0.7 88 323-436 13-100 (131)
54 4ffb_C Protein STU2; tubulin f 91.5 1.6 5.6E-05 45.3 13.0 99 329-438 110-212 (278)
55 3ibv_A Exportin-T; karyopherin 91.5 29 0.00099 42.9 26.1 138 303-441 416-569 (980)
56 1wa5_C Importin alpha RE-expor 91.0 35 0.0012 41.7 36.1 127 305-442 23-156 (960)
57 4hat_C Exportin-1; heat repeat 90.4 43 0.0015 41.6 46.1 135 300-439 428-570 (1023)
58 1vdy_A Hypothetical protein (R 88.6 0.75 2.6E-05 43.5 6.6 71 368-440 48-132 (140)
59 1xqr_A HSPBP1 protein; armadil 88.3 3 0.0001 44.2 11.9 113 322-441 81-199 (296)
60 1jdh_A Beta-catenin; beta-cate 88.2 18 0.00062 40.1 19.2 65 749-821 462-528 (529)
61 4ffb_C Protein STU2; tubulin f 88.0 4.2 0.00014 42.1 12.7 114 324-441 57-171 (278)
62 3o2t_A Symplekin; heat repeat, 87.9 5.8 0.0002 43.7 14.1 156 245-438 23-183 (386)
63 3grl_A General vesicular trans 87.8 4.6 0.00016 47.3 13.8 138 302-441 39-198 (651)
64 2z6g_A B-catenin; FULL-length, 87.4 22 0.00076 42.6 20.3 143 297-441 246-431 (780)
65 2z6h_A Catenin beta-1, beta-ca 87.0 20 0.00067 41.7 19.0 143 297-441 110-295 (644)
66 3gs3_A Symplekin, LD45768P; he 86.8 25 0.00086 36.4 17.5 119 701-822 47-172 (257)
67 2of3_A ZYG-9; multifunctional 86.6 33 0.0011 35.7 21.5 181 331-526 55-247 (266)
68 1xqr_A HSPBP1 protein; armadil 85.0 16 0.00055 38.5 15.4 114 323-442 125-242 (296)
69 3tpo_A Importin subunit alpha- 82.9 36 0.0012 38.4 18.3 136 297-439 263-407 (529)
70 2z6h_A Catenin beta-1, beta-ca 82.1 79 0.0027 36.5 37.0 112 322-441 14-130 (644)
71 3o2t_A Symplekin; heat repeat, 80.3 19 0.00064 39.7 13.9 149 669-822 22-182 (386)
72 3ul1_B Importin subunit alpha- 79.3 37 0.0013 38.2 16.6 181 297-498 244-436 (510)
73 2z6g_A B-catenin; FULL-length, 78.2 1.2E+02 0.0041 36.1 39.2 137 298-441 163-308 (780)
74 3grl_A General vesicular trans 76.6 28 0.00094 40.8 14.4 113 322-442 122-245 (651)
75 3m1i_C Exportin-1; heat repeat 76.0 1.6E+02 0.0053 36.3 41.2 132 302-440 430-571 (1049)
76 3l9t_A Putative uncharacterize 73.6 73 0.0025 32.6 15.0 168 249-441 42-210 (240)
77 3now_A UNC-45 protein, SD10334 73.0 1.7E+02 0.0057 35.3 36.8 442 326-824 96-653 (810)
78 4ady_A RPN2, 26S proteasome re 65.5 1E+02 0.0034 37.9 16.4 58 379-441 622-679 (963)
79 3b2a_A TON_1937, putative unch 64.2 15 0.0005 37.9 7.4 82 368-453 32-115 (265)
80 1jdh_A Beta-catenin; beta-cate 62.6 1.8E+02 0.0062 31.8 36.0 112 322-441 17-133 (529)
81 3tpo_A Importin subunit alpha- 59.5 2.2E+02 0.0076 31.8 19.3 131 301-441 225-367 (529)
82 3nmz_A APC variant protein; pr 59.4 59 0.002 36.4 12.3 140 298-442 300-454 (458)
83 3nmw_A APC variant protein; AR 59.1 57 0.002 35.1 11.8 139 298-442 184-338 (354)
84 1vdy_A Hypothetical protein (R 58.2 8.5 0.00029 36.3 4.2 33 793-825 48-80 (140)
85 3now_A UNC-45 protein, SD10334 57.6 3E+02 0.01 33.1 18.6 110 323-439 291-409 (810)
86 3ul1_B Importin subunit alpha- 46.1 3.5E+02 0.012 30.0 18.7 135 298-441 156-306 (510)
87 1h2v_C 80 kDa nuclear CAP bind 44.4 73 0.0025 38.2 10.3 130 623-762 7-143 (771)
88 3rk6_A Polyadenylate-binding p 39.9 2.3E+02 0.0077 28.6 11.9 127 681-813 72-226 (234)
89 4gmo_A Putative uncharacterize 35.2 2.3E+02 0.0079 33.1 12.7 71 323-399 35-106 (684)
90 1q87_A 39 kDa initiator bindin 33.1 32 0.0011 34.1 3.8 51 386-438 36-86 (221)
91 1vsy_5 Proteasome activator BL 32.8 4.8E+02 0.016 32.2 15.2 76 365-441 797-877 (997)
92 1h2v_C 80 kDa nuclear CAP bind 31.8 1.6E+02 0.0054 35.3 10.4 113 223-337 26-143 (771)
93 2pjw_V Vacuolar protein sortin 30.4 1.1E+02 0.0036 26.6 6.3 71 616-686 2-82 (91)
94 3nmz_A APC variant protein; pr 30.3 2.6E+02 0.009 31.1 11.5 129 303-436 218-361 (458)
95 3zyl_A Phosphatidylinositol-bi 28.7 5E+02 0.017 26.7 13.3 70 368-439 64-145 (271)
96 3nmw_A APC variant protein; AR 28.0 2.1E+02 0.0071 30.6 9.8 108 324-436 129-245 (354)
97 2pjw_V Vacuolar protein sortin 27.6 68 0.0023 27.9 4.6 70 192-261 3-82 (91)
98 3m62_A Ubiquitin conjugation f 27.5 9.3E+02 0.032 29.5 19.3 293 171-506 538-865 (968)
99 3l6x_A Catenin delta-1; cateni 27.2 2.6E+02 0.0089 32.3 10.9 111 322-441 355-479 (584)
100 2x19_B Importin-13; nuclear tr 26.9 8.6E+02 0.029 28.9 53.3 219 206-441 61-320 (963)
101 3rk6_A Polyadenylate-binding p 25.7 4.7E+02 0.016 26.2 11.4 116 257-378 73-214 (234)
102 3a6p_A Exportin-5; exportin-5, 25.4 1.1E+03 0.037 29.5 42.3 73 728-805 602-682 (1204)
103 2nsz_A Programmed cell death p 25.0 2.1E+02 0.0072 26.0 7.9 53 369-421 41-94 (129)
104 1lsh_A Lipovitellin (LV-1N, LV 24.8 9.3E+02 0.032 29.6 16.1 176 205-440 394-578 (1056)
105 1xm9_A Plakophilin 1; armadill 24.6 1.7E+02 0.0058 32.2 8.6 108 324-439 4-117 (457)
106 3opb_A SWI5-dependent HO expre 24.4 2.2E+02 0.0074 34.1 9.7 137 304-441 578-731 (778)
107 2ion_A PDCD4, programmed cell 23.7 2.2E+02 0.0074 26.8 7.9 53 369-421 43-96 (152)
108 1vsy_5 Proteasome activator BL 22.9 1.8E+02 0.0062 35.9 9.0 104 333-443 813-929 (997)
109 1juq_A ADP-ribosylation factor 22.8 42 0.0015 32.4 2.7 68 390-458 31-101 (171)
110 1upk_A MO25 protein; transfera 21.8 6.5E+02 0.022 26.9 11.9 197 221-439 16-239 (341)
111 1xm9_A Plakophilin 1; armadill 21.6 4.4E+02 0.015 28.8 11.2 108 322-438 331-449 (457)
112 4ady_A RPN2, 26S proteasome re 20.0 3.6E+02 0.012 33.0 10.6 92 333-441 519-610 (963)
No 1
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=99.08 E-value=7.3e-06 Score=99.30 Aligned_cols=595 Identities=10% Similarity=0.095 Sum_probs=300.7
Q ss_pred hHhHHHHHHHHHHHhcchhhcccCCCcchhHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHhccccc-hh
Q psy8182 168 DFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGIS-CT 246 (827)
Q Consensus 168 ~~~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~~-~~ 246 (827)
..-|..+++++..++.. .++...++.+.+.+...+...+.++ +..+|..++++++.++..|+..+. .-
T Consensus 188 ~~vr~~a~~~l~~~~~~-----~~~~~~~~~~~~~il~~l~~~~~~~------~~~vr~~a~~~l~~l~~~~~~~~~~~~ 256 (876)
T 1qgr_A 188 NNVKLAATNALLNSLEF-----TKANFDKESERHFIMQVVCEATQCP------DTRVRVAALQNLVKIMSLYYQYMETYM 256 (876)
T ss_dssp HHHHHHHHHHHHHHGGG-----CHHHHTSHHHHHHHHHHHHHHTTCS------SHHHHHHHHHHHHHHHHHSGGGCHHHH
T ss_pred HHHHHHHHHHHHHHHHH-----HHHHHHhHHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 34577788888777652 1111112233344555566666544 357899999999999988765432 11
Q ss_pred h-hHHHHhhh-cccc----cHHHHHHHHHHHHhh-------------------CC--------CchHHHHHHHHhccccC
Q psy8182 247 V-KIVQLLKN-CEHL----VSPLAQAVVMFIRNH-------------------GC--------KSLVREIVREISAMEDG 293 (827)
Q Consensus 247 ~-~IiqlL~~-~ehl----~~~~Ae~v~~l~~~~-------------------~~--------~~l~~~ilreI~~~~~~ 293 (827)
. .+++.+.. ..+. .....+++..+.+.. .. ..++..+++-++.....
T Consensus 257 ~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~d 336 (876)
T 1qgr_A 257 GPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDEN 336 (876)
T ss_dssp TTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhccccc
Confidence 1 34443322 1222 122223333333321 00 12222333333322110
Q ss_pred CCcCCchhhhHHHHHHHHHHHHhHHHHHhh-HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHH
Q psy8182 294 NENAGQDSSKMIAAFLNEVAAHGAEYVIPA-MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLS-DEAKEQRDEYL 371 (827)
Q Consensus 294 d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~-is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~-~~~~~~rd~ll 371 (827)
+-..+...-+.....|..+++..|..+++. +..+...|.+++..+|.+.+.++|.+... .. +........++
T Consensus 337 ~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~------~~~~~~~~~~~~~l 410 (876)
T 1qgr_A 337 DDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEG------PEPSQLKPLVIQAM 410 (876)
T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSS------SCHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHCcHhhHHHHHHHHHHHccCCChHHHHHHHHHHHHHHcC------CCHHHHHHHHHHHH
Confidence 001123334567788889998888655544 34555678889999999999999987632 12 22334557788
Q ss_pred HHHHHhhcccchhHHHHHHHHHHHHHhCCC--C-ChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC-------
Q psy8182 372 NVLLDHMHDVHTFVRTKVLQLFQRLVLDKA--I-PVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP------- 441 (827)
Q Consensus 372 ~~L~er~~D~n~~vRskvLq~~~~L~~~~~--i-P~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP------- 441 (827)
..|...+.|.++.||..|+.++.++++.-. + ...+...++......|.|. ..||.+|...|..+...-+
T Consensus 411 ~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~~~~~~~ 489 (876)
T 1qgr_A 411 PTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAE-PRVASNVCWAFSSLAEAAYEAADVAD 489 (876)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhhhcccccc
Confidence 889999999999999999999999998521 1 2245678888899999996 8999999999999987621
Q ss_pred ----CC-CCCChhHHHHhhhhhhhhhhhHhhhhhhcCCCCchhhhhhhhhHHHhhhccccccHHHHHHHHHHHHHHHHHH
Q psy8182 442 ----FA-AKATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKE 516 (827)
Q Consensus 442 ----f~-~~L~~~~~v~ev~~l~ei~~~L~e~~~Al~~e~~~~i~e~FD~lySll~~~~~l~~~~~~~l~~~~l~~~~s~ 516 (827)
.. ..+. .+ ...+-+.|-........+...--...++++-.++...+.--......++ ..+ +..
T Consensus 490 ~~~~~~~~~l~--~~------~~~il~~L~~~l~~~~~~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~l~-~~l---~~~ 557 (876)
T 1qgr_A 490 DQEEPATYCLS--SS------FELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTT-LVI---MER 557 (876)
T ss_dssp SCCCCCCCSST--TT------HHHHHHHHHHHTTSCSSCSTTHHHHHHHHHHHHHHTCCSTTHHHHHHHH-HHH---HHH
T ss_pred ccccccchhhh--Hh------HHHHHHHHHHHHhCcCcchhhHHHHHHHHHHHHHHHCchhhHHHHHHHH-HHH---HHH
Confidence 00 0111 01 1122222222221111111211245777777777766542222233444 332 222
Q ss_pred HHHhHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhccchhhhh--hhhhhhhhhhhhhcccccCcch
Q psy8182 517 FSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFE-TRLQKDYHKIVIDA--KARKVKVRAAIKHNEKMQWDWD 593 (827)
Q Consensus 517 l~~~l~~~~~~~~~~~~~~~~~~~~lkm~~fLl~~~~~~~e-~~~~~~~~~~~~~~--kg~k~~~~~~~~~~~~~~~~W~ 593 (827)
+...+. +.....+..+....-+.....+-.+..++.... .... ..-+...+. +.=+.. . + .|
T Consensus 558 l~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~l~~~l~~~l~~~---------~-~-~~- 622 (876)
T 1qgr_A 558 LQQVLQ--MESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDAL-QISDVVMASLLRMFQST---------A-G-SG- 622 (876)
T ss_dssp HHHHHT--TTTSCCSTTHHHHHHHHHHHHHHHHHHHHTTSCHHHHH-TTHHHHHHHHHHHC----------------CC-
T ss_pred HHHHHH--HHhccCChhhHHHHHHHHHHHHHHHHHHHHHhChhhhh-HHHHHHHHHHHHHHHhc---------c-C-CC-
Confidence 222211 111100111111000000111112222221111 0000 000000000 000000 0 0 01
Q ss_pred hhHHHHHHHHHHHhccccccccCCChhhHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHhhCcchh-hHH
Q psy8182 594 FHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGIS-CTV 672 (827)
Q Consensus 594 ~~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~y~lLE~~~~~~~K~~~ir~~if~il~~~vk~y~h~~~-~~~ 672 (827)
.-++.++.++..+..- +..-+. .|+.-+...++..++++. +..+|...+..+|.+++..|..+. ...
T Consensus 623 ~v~~~a~~~l~~l~~~-~~~~~~------~~~~~~~~~l~~~l~~~~-----~~~vr~~a~~~l~~l~~~~~~~~~~~~~ 690 (876)
T 1qgr_A 623 GVQEDALMAVSTLVEV-LGGEFL------KYMEAFKPFLGIGLKNYA-----EYQVCLAAVGLVGDLCRALQSNIIPFCD 690 (876)
T ss_dssp HHHHHHHHHHHHHHHH-HGGGGG------GGHHHHHHHHHHHHHHCT-----THHHHHHHHHHHHHHHHHHGGGGHHHHH
T ss_pred CccHHHHHHHHHHHHH-HHhhHH------HHHHHHHHHHHHHHcCcc-----hHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 1245555555555541 111111 234446677778887762 467999999999999988774332 223
Q ss_pred HHH----HHHhh---hcccchHHHHHHHHHHHhcC--CcchHHHHHHHHhcccCCCccCCC--------cc----hhHHH
Q psy8182 673 KIV----QLLKN---CEHLVSPLAQAVVMFIRNHG--CKSLVREIVREISAMEDGNENAGQ--------DS----SKMIA 731 (827)
Q Consensus 673 ~Ii----qlL~~---~Ehl~~~~Ae~v~~l~~~~~--~~~l~~eilreI~~~~~~d~~~Ds--------~g----~K~~s 731 (827)
.|+ +.|.. .+.+-...+.++..+....+ .......++.-+.+....+...|. .- .+.++
T Consensus 691 ~i~~~l~~~l~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~l~~~~~~l~~~~~~~~~~~d~~~~~~~~~~r~~~~~~~~ 770 (876)
T 1qgr_A 691 EVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYT 770 (876)
T ss_dssp HHHHHHHHHHTCTTSCGGGHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHTCCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccccHHhhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHHH
Confidence 333 44443 12344466666666666443 223344444444332111000000 11 12222
Q ss_pred HHHHHHHHHh------HHHHHhhHHHHHhh----hCCC--ChhHHhHHHHHHHHHHHHhhccCCCChHHHHH-HHHHHHH
Q psy8182 732 AFLNEVAAHG------AEYVIPAMEELLLN----LEKE--SYLMRNCTLTIVTELLINVYKREDLSDEAKEQ-RDEYLNV 798 (827)
Q Consensus 732 ~FL~~Lae~~------P~lvl~~~s~L~~~----Ld~E--sy~lR~aVlev~g~ii~~~l~~~~~~e~~k~~-rd~~ld~ 798 (827)
..+..+.... +..+-+.+..+++. .+++ +-.+|.+.+.++|.++... + .+..... .+.++..
T Consensus 771 ~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~vr~~a~~~l~~l~~~~--~---~~~~~~~~~~~~i~~ 845 (876)
T 1qgr_A 771 GIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAF--G---KDVLKLVEARPMIHE 845 (876)
T ss_dssp HHHHHHHCSSSSCCGGGGGSGGGHHHHHHHHHHHHTCSCCCHHHHHHHHHHHHHHHHHH--C---THHHHHHHTSHHHHH
T ss_pred HHHHHHccCcccccchHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh--C---cHHHHHHHhcHHHHH
Confidence 2223333210 12223333333333 3666 6799999999999999865 2 1133333 4455666
Q ss_pred HHH-hcCcCChhhhhHHHHHHHHhhcC
Q psy8182 799 LLD-HMHDVHTFVRTKVSTEKKLECWQ 824 (827)
Q Consensus 799 L~e-r~~D~nayVRsKvlq~~~~lc~~ 824 (827)
|.+ -+.|-++-||..|......+...
T Consensus 846 ll~~~l~~~~~~~r~~a~~a~~~~~~~ 872 (876)
T 1qgr_A 846 LLTEGRRSKTNKAKTLARWATKELRKL 872 (876)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCHhHHHHHHHHHHHHHHh
Confidence 666 55699999999999888877654
No 2
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=98.99 E-value=2.7e-05 Score=94.08 Aligned_cols=253 Identities=12% Similarity=0.097 Sum_probs=158.2
Q ss_pred HhHHHHHHHHHHHhcchhhcccCCCcchhHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHhccccch-hh
Q psy8182 169 FHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISC-TV 247 (827)
Q Consensus 169 ~~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~~~-~~ 247 (827)
.-|..+++++..++.. .......+.+...+.......+.++ +..+|..++++++..+..|+..+.- -.
T Consensus 196 ~vr~~al~~l~~~~~~-----~~~~~~~~~~~~~ll~~l~~~~~~~------~~~~r~~a~~~l~~l~~~~~~~~~~~l~ 264 (861)
T 2bpt_A 196 AVRLAALNALADSLIF-----IKNNMEREGERNYLMQVVCEATQAE------DIEVQAAAFGCLCKIMSKYYTFMKPYME 264 (861)
T ss_dssp HHHHHHHHHHHHHGGG-----CHHHHTSHHHHHHHHHHHHHHHTCS------CHHHHHHHHHHHHHHHHHHGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----HHHHccChhHHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466777777776531 0000011122334455555555443 4688999999999999888654331 11
Q ss_pred -hHHHHhhh-cccc----cHHHHHHHHHHHHhhC---------------C--------CchHHHHHHHHhccccCCCcCC
Q psy8182 248 -KIVQLLKN-CEHL----VSPLAQAVVMFIRNHG---------------C--------KSLVREIVREISAMEDGNENAG 298 (827)
Q Consensus 248 -~IiqlL~~-~ehl----~~~~Ae~v~~l~~~~~---------------~--------~~l~~~ilreI~~~~~~d~~~D 298 (827)
.|++++.. ..+. .....+++..+.+... . +.++..++.-+...+..+...+
T Consensus 265 ~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ll~~l~~~~~d~~d~~ 344 (861)
T 2bpt_A 265 QALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDD 344 (861)
T ss_dssp HTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCC
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 34443221 1111 1223344444443310 1 1222333333322111100112
Q ss_pred chhhhHHHHHHHHHHHHhHHHHHhh-HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHH
Q psy8182 299 QDSSKMIAAFLNEVAAHGAEYVIPA-MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLS-DEAKEQRDEYLNVLLD 376 (827)
Q Consensus 299 ~~g~k~~s~FL~~Lae~~P~l~l~~-is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~-~~~~~~rd~ll~~L~e 376 (827)
....+.....|..++...|..+++. +..+...+.++++..|.+.+.++|.+... .. +......+.++..|..
T Consensus 345 ~~~r~~a~~~L~~l~~~~~~~~~~~l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~------~~~~~~~~~l~~il~~l~~ 418 (861)
T 2bpt_A 345 WNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDG------PDKVQRTYYVHQALPSILN 418 (861)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSS------SCHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHccHhHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHH
Confidence 3445678889999999888665544 45556668889999999999999987621 11 2334456788999999
Q ss_pred hhcccchhHHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 377 HMHDVHTFVRTKVLQLFQRLVLDK---AIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 377 r~~D~n~~vRskvLq~~~~L~~~~---~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
.+.|.++.||..++.++.++++.- ..|..+...++......|.|. +.||.+|...|..+...
T Consensus 419 ~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~ 483 (861)
T 2bpt_A 419 LMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDH-PKVATNCSWTIINLVEQ 483 (861)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHHHHHh
Confidence 999999999999999999999841 234566788999999999997 89999999999998875
No 3
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=98.95 E-value=4.6e-06 Score=96.05 Aligned_cols=128 Identities=9% Similarity=0.041 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHhHHHHH-hh-HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcc
Q psy8182 303 KMIAAFLNEVAAHGAEYVI-PA-MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHD 380 (827)
Q Consensus 303 k~~s~FL~~Lae~~P~l~l-~~-is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D 380 (827)
+....-|.++++..|.-.+ +. +..+..+..++++..|.+...++|.+.... .+ ..++.++..|.+-..|
T Consensus 105 ~~a~~~L~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~~R~~a~~~l~~~~~~~------~~---~~~~~l~~~l~~l~~d 175 (588)
T 1b3u_A 105 DKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRV------SS---AVKAELRQYFRNLCSD 175 (588)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTS------CH---HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhc------CH---HHHHHHHHHHHHHhCC
Confidence 3444566666666554322 22 334445567888999999999999865421 11 2467888888888899
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCh-HHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 381 VHTFVRTKVLQLFQRLVLDKAIPV-AFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 381 ~n~~vRskvLq~~~~L~~~~~iP~-~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
-++.||..|++.+..+++.- |. .....++.....-+.|.+..||+.|+..|..+....|
T Consensus 176 ~~~~VR~~a~~~l~~l~~~~--~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~ 235 (588)
T 1b3u_A 176 DTPMVRRAAASKLGEFAKVL--ELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLP 235 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHTS--CHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHh--cHHhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999852 32 2235567777777899999999999999999887654
No 4
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=98.80 E-value=6.9e-05 Score=91.36 Aligned_cols=536 Identities=12% Similarity=0.143 Sum_probs=272.5
Q ss_pred HhHHHHHHHHHHHhcchhhcccCCCcchhHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHhccccc----
Q psy8182 169 FHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGIS---- 244 (827)
Q Consensus 169 ~~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~~---- 244 (827)
.-|..++.++...+...-. .-...+.-+.+.++.++.++ +..+|..+++.|+.++..+...+.
T Consensus 189 ~vR~~A~~aL~~~~~~~~~-------~~~~~~~~~l~~l~~~~~d~------~~~vr~~a~~~L~~l~~~~~~~~~~~l~ 255 (852)
T 4fdd_A 189 KIRSHAVACVNQFIISRTQ-------ALMLHIDSFIENLFALAGDE------EPEVRKNVCRALVMLLEVRMDRLLPHMH 255 (852)
T ss_dssp HHHHHHHHHHHTTTTTTCH-------HHHTSHHHHHHHHHHHHTCC------CHHHHHHHHHHHHHHHHHCHHHHGGGHH
T ss_pred HHHHHHHHHHHHHHhcccH-------HHHHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4467777777765542111 11111233556666666654 468999999999988887653322
Q ss_pred -hhhhHHHHhhhcc-cccHHHHHHHHHHHHhh-----C---CCchHHHHHHHHh---------ccccCCCc------CCc
Q psy8182 245 -CTVKIVQLLKNCE-HLVSPLAQAVVMFIRNH-----G---CKSLVREIVREIS---------AMEDGNEN------AGQ 299 (827)
Q Consensus 245 -~~~~IiqlL~~~e-hl~~~~Ae~v~~l~~~~-----~---~~~l~~~ilreI~---------~~~~~d~~------~D~ 299 (827)
+-..+++.+..-+ .......+++..+.+.- - .+.++..++.-+. ..++.+-. .+-
T Consensus 256 ~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~ 335 (852)
T 4fdd_A 256 NIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDW 335 (852)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCC
T ss_pred HHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccc
Confidence 1122233333211 11122234444443311 0 1133333333321 01110100 112
Q ss_pred hhhhHHHHHHHHHHHHhHHHHHhh-HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhh
Q psy8182 300 DSSKMIAAFLNEVAAHGAEYVIPA-MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHM 378 (827)
Q Consensus 300 ~g~k~~s~FL~~Lae~~P~l~l~~-is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~ 378 (827)
..-+..+..|..|++..|..+++. +..+...+.+++...|.+.+.++|.|.... .+........++..|...+
T Consensus 336 ~vr~~a~~~L~~la~~~~~~~~~~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~------~~~~~~~l~~~l~~l~~~l 409 (852)
T 4fdd_A 336 NLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGC------MQGMIPYLPELIPHLIQCL 409 (852)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTT------HHHHGGGHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcc------hHHHHHHHHHHHHHHHHHc
Confidence 235677889999999988777664 455666788999999999999999987532 1122234578899999999
Q ss_pred cccchhHHHHHHHHHHHHHhCC--CCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCCCCCCC--hhHHHHh
Q psy8182 379 HDVHTFVRTKVLQLFQRLVLDK--AIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFAAKAT--TQYYVQA 454 (827)
Q Consensus 379 ~D~n~~vRskvLq~~~~L~~~~--~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf~~~L~--~~~~v~e 454 (827)
.|.++.||..+..++.++++.- .....+...++...+..|.|.+..||++|..-|..+.+..+- .+. ...+.+.
T Consensus 410 ~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~~~~~--~l~~~l~~ll~~ 487 (852)
T 4fdd_A 410 SDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACT--ELVPYLAYILDT 487 (852)
T ss_dssp TCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGG--GGGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhH--hhHhHHHHHHHH
Confidence 9999999999999999999831 112235678999999999999999999999999999876431 110 0111111
Q ss_pred hhhh-h-----h---hhhhHhhhhhhcCC--CCchhhhhhhhhHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHhHhh
Q psy8182 455 ELTL-E-----E---FNERIKDCFEALDN--DGPMFILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDN 523 (827)
Q Consensus 455 v~~l-~-----e---i~~~L~e~~~Al~~--e~~~~i~e~FD~lySll~~~~~l~~~~~~~l~~~~l~~~~s~l~~~l~~ 523 (827)
.... + . +-+.+..+..++.+ ..+.++..+...+.........-++..+ .++ +.+......++..+..
T Consensus 488 L~~~l~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~~~~l~p~l~~~~~~l~d~~~~~~-~~~-~~l~~i~~~~g~~~~~ 565 (852)
T 4fdd_A 488 LVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLF-PLL-ECLSSVATALQSGFLP 565 (852)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHGGGGCCHHHHHHHHHHHHHHHHHSCTTCTTHH-HHH-HHHHHHHHHHGGGGHH
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHhcccccHHHH-HHH-HHHHHHHHHHhHhHHH
Confidence 0000 0 0 00001111111100 0011112222222211111111111111 222 2221111111111110
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccchhhhhhhhhhhhhhhhhhcccccCcchhhHHHH---H
Q psy8182 524 FLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHKIVIDAKARKVKVRAAIKHNEKMQWDWDFHLSNG---L 600 (827)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~lkm~~fLl~~~~~~~e~~~~~~~~~~~~~~kg~k~~~~~~~~~~~~~~~~W~~~r~~~---L 600 (827)
++ . -++..++..+..... +...... . ....... + .+-+..+ +
T Consensus 566 ~~--------------~------~i~~~~~~~l~~~l~----------~~~~~~~-~--~~~~~~~-d-~~~~~~~l~~l 610 (852)
T 4fdd_A 566 YC--------------E------PVYQRCVNLVQKTLA----------QAMLNNA-Q--PDQYEAP-D-KDFMIVALDLL 610 (852)
T ss_dssp HH--------------H------HHHHHHHHHHHHHHH----------HHHHHHH-C--TTTSCCC-C-THHHHHHHHHH
T ss_pred HH--------------H------HHHHHHHHHHHHHHH----------HHHHhhc-C--CcccCCC-c-chHHHHHHHHH
Confidence 00 0 000111111110000 0000000 0 0000000 1 1224434 4
Q ss_pred HHHHHHhccccccccCCChhhHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHhhCcchh-hHHHHHH-HH
Q psy8182 601 NSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGIS-CTVKIVQ-LL 678 (827)
Q Consensus 601 ~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~y~lLE~~~~~~~K~~~ir~~if~il~~~vk~y~h~~~-~~~~Iiq-lL 678 (827)
..+.+.+.-.+...+. . .-+...+..+++++ +..+|+..+..+|.+++.++..+. .-..++. ++
T Consensus 611 ~~l~~~l~~~~~~~~~----~----~~~~~~l~~~l~~~------~~~vr~~a~~~l~~l~~~~~~~~~~~l~~~lp~l~ 676 (852)
T 4fdd_A 611 SGLAEGLGGNIEQLVA----R----SNILTLMYQCMQDK------MPEVRQSSFALLGDLTKACFQHVKPCIADFMPILG 676 (852)
T ss_dssp HHHHHHHGGGGHHHHH----T----CCHHHHHHHHTTCS------SHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHH
T ss_pred HHHHHHHhHhHHHHhc----C----CcHHHHHHHHhCCC------ChhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4444444433222220 0 12445666677766 367999999999999988775542 2223332 22
Q ss_pred hhhccc----chHHHHHHHHHHHhcC--CcchHHHHHHHHhcccCCCccCCCcchhHHHHHHHHHHHHhHHHHHhhHHHH
Q psy8182 679 KNCEHL----VSPLAQAVVMFIRNHG--CKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEEL 752 (827)
Q Consensus 679 ~~~Ehl----~~~~Ae~v~~l~~~~~--~~~l~~eilreI~~~~~~d~~~Ds~g~K~~s~FL~~Lae~~P~lvl~~~s~L 752 (827)
...++- -...+.++..++...+ .....+.++..+...-.+. ....+--+|.+.-+.+|+..+|..+-++++.+
T Consensus 677 ~~l~~~~~~v~~~a~~alg~i~~~~~~~~~p~~~~il~~L~~~l~~~-~~~~~~~~~a~~~igrl~~~~~~~~~~~l~~~ 755 (852)
T 4fdd_A 677 TNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRP-NTPKTLLENTAITIGRLGYVCPQEVAPMLQQF 755 (852)
T ss_dssp HTCCTTSHHHHHHHHHHHHHHHHHHGGGGGGGTHHHHHHHHHHHTCS-SCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHH
T ss_pred HHcCccchHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHhCCC-CCCchHHHHHHHHHHHHHHhCHHHhCccHHHH
Confidence 333221 1234444555555442 3444455555554432110 12234567888999999999999998888887
Q ss_pred Hhh----h-CCCChhHHhHHHHHHHHHHHH
Q psy8182 753 LLN----L-EKESYLMRNCTLTIVTELLIN 777 (827)
Q Consensus 753 ~~~----L-d~Esy~lR~aVlev~g~ii~~ 777 (827)
++. | +.+....|..+...++.||..
T Consensus 756 ~~~~~~~l~~~~d~~e~~~a~~~l~~li~~ 785 (852)
T 4fdd_A 756 IRPWCTSLRNIRDNEEKDSAFRGICTMISV 785 (852)
T ss_dssp HHHHHHHHHTSCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHHHHh
Confidence 663 5 458888999999999999986
No 5
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=98.78 E-value=3.3e-05 Score=91.33 Aligned_cols=471 Identities=11% Similarity=0.095 Sum_probs=260.7
Q ss_pred HHHHHHHHHHHhhCCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHH
Q psy8182 262 PLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNC 341 (827)
Q Consensus 262 ~~Ae~v~~l~~~~~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~a 341 (827)
.+..++..+...||.+.+..++++-++. +|-.--|-.-.++..+++..|.+++--++.|.+-|.+.+..+|..
T Consensus 54 ~l~kli~~~~~G~d~~~~~~~vik~~~s-------~~~~~Krl~Yl~~~~~~~~~~e~~~l~in~l~kDL~~~n~~vr~l 126 (618)
T 1w63_A 54 NVAKLLYMHMLGYPAHFGQLECLKLIAS-------QKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGL 126 (618)
T ss_dssp HHHHHHHHHHTTCCCGGGHHHHHHHHHS-------SSHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHSCSSSHHHHH
T ss_pred HHHHHHHHHHcCCCCcchHHHHHHHHcC-------CchHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcCCCCHhHHHH
Confidence 3445555555556666677777776652 355566777789999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCC
Q psy8182 342 TLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDK 421 (827)
Q Consensus 342 vle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DK 421 (827)
.+.++|+|... +.-..++..+...+.|.++|||.+|+.++.+++... |- ....++......|.|+
T Consensus 127 AL~~L~~i~~~------------~~~~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~--p~-~v~~~~~~l~~lL~D~ 191 (618)
T 1w63_A 127 ALCTLGCMGSS------------EMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKV--PE-LMEMFLPATKNLLNEK 191 (618)
T ss_dssp HHHHHHHHCCH------------HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHC--GG-GGGGGGGGTTTSTTCC
T ss_pred HHHHHHhcCCH------------HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHC--hH-HHHHHHHHHHHHhCCC
Confidence 99999998621 233567788888888999999999999999999853 42 2235666777889999
Q ss_pred ChHHHHHHHHHHHHHHhhCCCCCCCChhHHHHhhhhhhhhhhhHhh--------------------------hhhhcCCC
Q psy8182 422 SSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERIKD--------------------------CFEALDND 475 (827)
Q Consensus 422 Ss~VRk~Ai~Ll~~ll~~nPf~~~L~~~~~v~ev~~l~ei~~~L~e--------------------------~~~Al~~e 475 (827)
...|+-+|+.+|..+...+|= + ...+.+- ...+-..|.. +...+.+.
T Consensus 192 d~~V~~~Al~~L~~i~~~~~~---~-~~~~~~~---v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~il~~L~~l~~~ 264 (618)
T 1w63_A 192 NHGVLHTSVVLLTEMCERSPD---M-LAHFRKL---VPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRN 264 (618)
T ss_dssp CHHHHHHHHHHHHHHCCSHHH---H-HHHHHTT---HHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHHHHHHHHHTTT
T ss_pred CHhHHHHHHHHHHHHHHhChH---H-HHHHHHH---HHHHHHHHHHHHcCCCCccccccCCCCChHHHHHHHHHHHhCCC
Confidence 999999999999998766551 0 1111110 1111111111 11122222
Q ss_pred CchhhhhhhhhHHHhhhccccc---cHHHHHHHHHHHHHHHHHHHHHhHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy8182 476 GPMFILENFDTLYSMLTHFKSI---EYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEF 552 (827)
Q Consensus 476 ~~~~i~e~FD~lySll~~~~~l---~~~~~~~l~~~~l~~~~s~l~~~l~~~~~~~~~~~~~~~~~~~~lkm~~fLl~~~ 552 (827)
+|....+.++.+..++...... ...+..... ..+ . .- ..+...+..-.+. +..|
T Consensus 265 ~~~~~~~~~~~L~~l~~~~~~~~~~~~aV~~ea~-~~i-------~-------~l-~~~~~l~~~a~~~-------L~~~ 321 (618)
T 1w63_A 265 DDDSSEAMNDILAQVATNTETSKNVGNAILYETV-LTI-------M-------DI-KSESGLRVLAINI-------LGRF 321 (618)
T ss_dssp CHHHHHTTHHHHHHHHHTSCCSSTHHHHHHHHHH-HHH-------H-------HS-CCCHHHHHHHHHH-------HHHH
T ss_pred CHHHHHHHHHHHHHHHhccccccchHHHHHHHHH-HHH-------H-------hc-CCCHHHHHHHHHH-------HHHH
Confidence 2222222233333332211111 111111111 111 0 00 0111110000011 1111
Q ss_pred HHHHHhhhhhhccc-hhh-hhhhhhh----hhhhhhhhcccccCcchhhHHHHHHHHHHHhcc-ccccccCCChhhHHHH
Q psy8182 553 IINFETRLQKDYHK-IVI-DAKARKV----KVRAAIKHNEKMQWDWDFHLSNGLNSIHQILKS-KINKLWDPPVVEEEFV 625 (827)
Q Consensus 553 ~~~~e~~~~~~~~~-~~~-~~kg~k~----~~~~~~~~~~~~~~~W~~~r~~~L~~l~~~L~l-~l~~lw~~~~~ee~Fi 625 (827)
+...+.... .-.- ... -.+.... -....-.-..+. | .+-|.+++++|.++..- ++..+ -++++
T Consensus 322 L~~~d~~vr-~~aL~~L~~i~~~~p~~~~~~~~~i~~~l~d~--d-~~Ir~~alelL~~l~~~~nv~~i------v~eL~ 391 (618)
T 1w63_A 322 LLNNDKNIR-YVALTSLLKTVQTDHNAVQRHRSTIVDCLKDL--D-VSIKRRAMELSFALVNGNNIRGM------MKELL 391 (618)
T ss_dssp HTCSSTTTH-HHHHHHHHHHHHHHHHHHGGGHHHHHHGGGSS--C-HHHHHHHHHHHHHHCCSSSTHHH------HHHHH
T ss_pred HhCCCCchH-HHHHHHHHHHHhhCHHHHHHHHHHHHHHccCC--C-hhHHHHHHHHHHHHcccccHHHH------HHHHH
Confidence 111000000 0000 000 0000000 000000000010 1 24577888888888762 22111 12222
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHhhC-cchhhHHHHHHHHhhhc-ccchHHHHHHHHHHHhcCCcc
Q psy8182 626 NMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYN-HGISCTVKIVQLLKNCE-HLVSPLAQAVVMFIRNHGCKS 703 (827)
Q Consensus 626 ~l~~~~~y~lLE~~~~~~~K~~~ir~~if~il~~~vk~y~-h~~~~~~~IiqlL~~~E-hl~~~~Ae~v~~l~~~~~~~~ 703 (827)
+. +++. +..+|..+.+.||.++.+|. ....+-..++++|..-. +...-.+..+..+...+ +.
T Consensus 392 ~~--------l~~~------d~e~r~~~v~~I~~la~k~~~~~~~~v~~ll~lL~~~~~~v~~~~~~~l~~ii~~~--p~ 455 (618)
T 1w63_A 392 YF--------LDSC------EPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNS--VE 455 (618)
T ss_dssp HH--------HHHC------CHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTGGGSCSSHHHHHHHHHHHS--CS
T ss_pred HH--------HHhC------CHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhcC--hh
Confidence 22 2222 36799999999999999884 33445566667776543 44444555555555543 45
Q ss_pred hHHHHHHHHhcccCCCccCCCcchhHHHHHHHHHHHHh--------------HHHHHhhHHHHHhhhCCCChhHHhHHHH
Q psy8182 704 LVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHG--------------AEYVIPAMEELLLNLEKESYLMRNCTLT 769 (827)
Q Consensus 704 l~~eilreI~~~~~~d~~~Ds~g~K~~s~FL~~Lae~~--------------P~lvl~~~s~L~~~Ld~Esy~lR~aVle 769 (827)
+-+.+++.+++.-..+ .....-.|.+.-.|-|.++.. |..+++-+..+++.. .++...|.++++
T Consensus 456 l~~~~v~~L~~~l~~~-~~~~~~~~~~~wilGEy~~~i~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~vr~~~lt 533 (618)
T 1w63_A 456 MHAYTVQRLYKAILGD-YSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISN-MSTSVTRGYALT 533 (618)
T ss_dssp THHHHHHHHHHHHHHC-CSCSHHHHHHHHHHHHHHHHHTTCCCSSSCCCCCCHHHHHHHHHHHHHST-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccHHHHHHHHHHHhhhHHHhcccccccccccCCCHHHHHHHHHHHHhcc-CCCHHHHHHHHH
Confidence 5556666665543322 123344677888888888765 445555555555443 689999999999
Q ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHHHHHHhcCcCChhhhhHHHHHHHHhh
Q psy8182 770 IVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVSTEKKLEC 822 (827)
Q Consensus 770 v~g~ii~~~l~~~~~~e~~k~~rd~~ld~L~er~~D~nayVRsKvlq~~~~lc 822 (827)
+++.+.... ++ . ++.+..+|..-..|.|+=||-||...|.-+-
T Consensus 534 a~~Kl~~~~---~~----~---~~~l~~~L~~~~~~~d~evrdRA~~y~~ll~ 576 (618)
T 1w63_A 534 AIMKLSTRF---TC----T---VNRIKKVVSIYGSSIDVELQQRAVEYNALFK 576 (618)
T ss_dssp HHHHHHTTC---SS----C---HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC---cc----h---HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc
Confidence 999987632 21 1 2334444444566888899999988776653
No 6
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=98.69 E-value=3.1e-06 Score=99.45 Aligned_cols=159 Identities=16% Similarity=0.216 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHhhCCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHH
Q psy8182 262 PLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNC 341 (827)
Q Consensus 262 ~~Ae~v~~l~~~~~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~a 341 (827)
.+..++..+...++.+.+..++++-+ + +.|..--|....++..+++..|..++--++.+.+-|.+++..+|..
T Consensus 33 ~~~kli~~~~~G~d~~~~~~~vi~l~-----~--s~~~~~Krl~yl~l~~~~~~~~e~~~l~~n~l~kdL~~~n~~ir~~ 105 (591)
T 2vgl_B 33 AVKKVIAAMTVGKDVSSLFPDVVNCM-----Q--TDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRAL 105 (591)
T ss_dssp HHHHHHHHHHTTCCCGGGHHHHHHTT-----S--SSCHHHHHHHHHHHHHHHHHSHHHHHTTHHHHGGGSSSSSHHHHHH
T ss_pred HHHHHHHHHHCCCChHHHHHHHHHHh-----C--CCCHHHHHHHHHHHHHHcccCchHHHHHHHHHHHHcCCCCHHHHHH
Confidence 34444444455556666666667621 2 3455566777889999999999998878889999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHH-HHHHHHHHhhcCC
Q psy8182 342 TLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFT-LKLLERAIGRLMD 420 (827)
Q Consensus 342 vle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~-~~v~~~av~RL~D 420 (827)
.+.++|++.. ++ ....+...|..-+.|.++|||.+|..++.+++... |-... .+++......|.|
T Consensus 106 AL~~L~~i~~-----~~-------~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~--p~~~~~~~~~~~l~~lL~d 171 (591)
T 2vgl_B 106 AVRTMGCIRV-----DK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDIN--AQMVEDQGFLDSLRDLIAD 171 (591)
T ss_dssp HHHHHHTCCS-----GG-------GHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSS--CCCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHcCCh-----HH-------HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhC--hhhcccccHHHHHHHHhCC
Confidence 9999998751 11 22445666777778999999999999999999853 32221 4688888999999
Q ss_pred CChHHHHHHHHHHHHHHhhCC
Q psy8182 421 KSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 421 KSs~VRk~Ai~Ll~~ll~~nP 441 (827)
+++.||.+|+..|..+-..+|
T Consensus 172 ~d~~V~~~A~~aL~~i~~~~~ 192 (591)
T 2vgl_B 172 SNPMVVANAVAALSEISESHP 192 (591)
T ss_dssp SCHHHHHHHHHHHHHHTTSCC
T ss_pred CChhHHHHHHHHHHHHHhhCC
Confidence 999999999999999988887
No 7
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=98.67 E-value=8.7e-05 Score=85.30 Aligned_cols=123 Identities=10% Similarity=0.075 Sum_probs=89.7
Q ss_pred HHHHHHHHHhHHHHHhh-HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhH
Q psy8182 307 AFLNEVAAHGAEYVIPA-MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFV 385 (827)
Q Consensus 307 ~FL~~Lae~~P~l~l~~-is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~v 385 (827)
..+..++...+..+.+. +..+...+++++..+|.+.++++|.+.... .. ......++..|.+-..|-++.|
T Consensus 148 ~~l~~~~~~~~~~~~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~-~~-------~~~~~~l~~~l~~~~~d~~~~v 219 (588)
T 1b3u_A 148 GLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVL-EL-------DNVKSEIIPMFSNLASDEQDSV 219 (588)
T ss_dssp GGHHHHTTTSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTS-CH-------HHHHHTHHHHHHHHHTCSCHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh-cH-------HhHHHHHHHHHHHHhcCCcHHH
Confidence 34444555444333322 234445678899999999999999987532 11 1234667888888889999999
Q ss_pred HHHHHHHHHHHHhCCCCCh-HHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 386 RTKVLQLFQRLVLDKAIPV-AFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 386 RskvLq~~~~L~~~~~iP~-~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
|..|+..+..+++. +|. .....++.....-+.|++..||+.|++.|..+...
T Consensus 220 r~~a~~~l~~l~~~--~~~~~~~~~~~~~l~~~~~d~~~~vR~~a~~~l~~l~~~ 272 (588)
T 1b3u_A 220 RLLAVEACVNIAQL--LPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKA 272 (588)
T ss_dssp HTTHHHHHHHHHHH--SCHHHHHHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999985 232 23355677777778999999999999999998865
No 8
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=98.63 E-value=0.0013 Score=79.43 Aligned_cols=579 Identities=11% Similarity=0.037 Sum_probs=282.9
Q ss_pred HhHHHHHHHHHHHhcchhhcccCCCcchhHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHhccccc---h
Q psy8182 169 FHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGIS---C 245 (827)
Q Consensus 169 ~~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~~---~ 245 (827)
..|..++.++..+++- + .+. .-..++..+...+...+.+++ -+..+|..+++.++.++...+..+. .
T Consensus 145 ~~r~~al~~l~~l~~~-~----~~~-~~~~~~~~ll~~l~~~l~~~~----~~~~vr~~a~~~l~~~~~~~~~~~~~~~~ 214 (876)
T 1qgr_A 145 HMKESTLEAIGYICQD-I----DPE-QLQDKSNEILTAIIQGMRKEE----PSNNVKLAATNALLNSLEFTKANFDKESE 214 (876)
T ss_dssp HHHHHHHHHHHHHHHH-S----CHH-HHGGGHHHHHHHHHHHHSTTC----SCHHHHHHHHHHHHHHGGGCHHHHTSHHH
T ss_pred HHHHHHHHHHHHHHHh-c----CHh-hHHhHHHHHHHHHHHhhcCCC----CCHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3456666666666642 0 000 012344555566667776662 1457888888888776653221111 1
Q ss_pred hhhHHHHhhhcc-c----ccHHHHHHHHHHHHhhCC------C-chHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHH
Q psy8182 246 TVKIVQLLKNCE-H----LVSPLAQAVVMFIRNHGC------K-SLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVA 313 (827)
Q Consensus 246 ~~~IiqlL~~~e-h----l~~~~Ae~v~~l~~~~~~------~-~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~La 313 (827)
...+++.+...- . .-....+++..+.+.+.. . .++.-++..+ . ..|.........|+..++
T Consensus 215 ~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~-----~--~~~~~v~~~al~~l~~l~ 287 (876)
T 1qgr_A 215 RHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAM-----K--SDIDEVALQGIEFWSNVC 287 (876)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHH-----T--CSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-----c--CCchHHHHHHHHHHHHHH
Confidence 122444333211 1 112334555555554431 1 3443333322 1 123344455566777777
Q ss_pred HHhHH---------------------HH----HhhHHHHHHhh-------cCCCchHHHHHHHHHHHHHHHHhhcCCCch
Q psy8182 314 AHGAE---------------------YV----IPAMEELLLNL-------EKESYLMRNCTLTIVTELLINVYKREDLSD 361 (827)
Q Consensus 314 e~~P~---------------------l~----l~~is~l~~~L-------d~esy~lR~avle~~g~ii~~~~~~~~~~~ 361 (827)
+..+. .+ -.-+..+++.+ |++++..|.+..++++.+....- +
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~--~---- 361 (876)
T 1qgr_A 288 DEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE--D---- 361 (876)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHG--G----
T ss_pred HHHHhHhhhhccccccCCCccchhHHHHHHHHHHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCc--H----
Confidence 65321 11 11122344444 25689999999999999887542 1
Q ss_pred HHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCCh---HHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHh
Q psy8182 362 EAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPV---AFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIE 438 (827)
Q Consensus 362 ~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~---~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~ 438 (827)
.....++..+.+.+.|.++.+|..|+.++..+++.-. |. .+...++...+..|.|.+..||..|+..|..+..
T Consensus 362 ---~~~~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~-~~~~~~~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~ 437 (876)
T 1qgr_A 362 ---DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPE-PSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICE 437 (876)
T ss_dssp ---GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSC-HHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred ---hhHHHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 1356788899999999999999999999999987422 11 3456788888999999999999999999999998
Q ss_pred hCCCCC--CCChhHHHHhhhhh----hhhh----hhHhhhhhhcC-------CC-------CchhhhhhhhhHHHhhhcc
Q psy8182 439 SNPFAA--KATTQYYVQAELTL----EEFN----ERIKDCFEALD-------ND-------GPMFILENFDTLYSMLTHF 494 (827)
Q Consensus 439 ~nPf~~--~L~~~~~v~ev~~l----~ei~----~~L~e~~~Al~-------~e-------~~~~i~e~FD~lySll~~~ 494 (827)
..|-.. .-............ ..+. ..|..+..... ++ .....++++..+..++...
T Consensus 438 ~~~~~~~~~~~l~~~l~~l~~~l~~~~~v~~~a~~al~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~L~~~l~~~ 517 (876)
T 1qgr_A 438 LLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRP 517 (876)
T ss_dssp HCGGGTSSTTTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTSCTTSCCCCCCCSSTTTHHHHHHHHHHHTTSC
T ss_pred hCchhcccHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccccccccccccchhhhHhHHHHHHHHHHHHhCc
Confidence 765210 00111111111100 0000 01111111110 00 1113344555555544433
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccchhhhhhhh
Q psy8182 495 KSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHKIVIDAKAR 574 (827)
Q Consensus 495 ~~l~~~~~~~l~~~~l~~~~s~l~~~l~~~~~~~~~~~~~~~~~~~~lkm~~fLl~~~~~~~e~~~~~~~~~~~~~~kg~ 574 (827)
..-+...|..++ +.+ +.+..... . +. ..+.. -++..++........ ......
T Consensus 518 ~~~~~~~r~~~~-~~l----~~l~~~~~------~-~~---~~~~~------~l~~~l~~~l~~~~~--~~~~~~----- 569 (876)
T 1qgr_A 518 DGHQNNLRSSAY-ESL----MEIVKNSA------K-DC---YPAVQ------KTTLVIMERLQQVLQ--MESHIQ----- 569 (876)
T ss_dssp SSCSTTHHHHHH-HHH----HHHHHTCC------S-TT---HHHHH------HHHHHHHHHHHHHHT--TTTSCC-----
T ss_pred CcchhhHHHHHH-HHH----HHHHHHCc------h-hh---HHHHH------HHHHHHHHHHHHHHH--HHhccC-----
Confidence 221234554555 333 22221110 0 00 11111 111112222211000 000000
Q ss_pred hhhhhhhhhhcccccCcchhhHHHHHHHHHHHhcc-ccccccCCChhhHHHHHHHHHHHHHHhccccccccchHHHHHHH
Q psy8182 575 KVKVRAAIKHNEKMQWDWDFHLSNGLNSIHQILKS-KINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFI 653 (827)
Q Consensus 575 k~~~~~~~~~~~~~~~~W~~~r~~~L~~l~~~L~l-~l~~lw~~~~~ee~Fi~l~~~~~y~lLE~~~~~~~K~~~ir~~i 653 (827)
.. ++.-.|..-+..++.++..+.+- .- .-+. .++.-+...+..++.++. . + ..+++.+
T Consensus 570 ----~~------~d~~~~~~~~~~~~~~l~~l~~~~~~-~~~~------~~~~~l~~~l~~~l~~~~--~-~-~~v~~~a 628 (876)
T 1qgr_A 570 ----ST------SDRIQFNDLQSLLCATLQNVLRKVQH-QDAL------QISDVVMASLLRMFQSTA--G-S-GGVQEDA 628 (876)
T ss_dssp ----ST------THHHHHHHHHHHHHHHHHHHHTTSCH-HHHH------TTHHHHHHHHHHHC--------C-CHHHHHH
T ss_pred ----Ch------hhHHHHHHHHHHHHHHHHHHHHHhCh-hhhh------HHHHHHHHHHHHHHHhcc--C-C-CCccHHH
Confidence 00 00002333455566666665541 10 0001 133445566667776663 0 1 3578888
Q ss_pred HHHHHHHHHhhCcchh-----hHHHHHHHHhhhcc--cchHHHHHHHHHHHhcC--CcchHHHHHHHHhcccCCCccCCC
Q psy8182 654 FQIVGYLIKRYNHGIS-----CTVKIVQLLKNCEH--LVSPLAQAVVMFIRNHG--CKSLVREIVREISAMEDGNENAGQ 724 (827)
Q Consensus 654 f~il~~~vk~y~h~~~-----~~~~IiqlL~~~Eh--l~~~~Ae~v~~l~~~~~--~~~l~~eilreI~~~~~~d~~~Ds 724 (827)
+..++..++..|..+. +-..++..|...++ +-....+.+..+....+ ......+++..+.+.-.+. ..+.
T Consensus 629 ~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~~l~~~-~~~~ 707 (876)
T 1qgr_A 629 LMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNE-NVHR 707 (876)
T ss_dssp HHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHTCT-TSCG
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCc-cccH
Confidence 8888888877655432 22233344443321 22234444555555443 2223345555444321110 0122
Q ss_pred cchhHHHHHHHHHHHHhHHHHHhhHHHHHhh----hCCCC-----------hhHHhHHHHHHHHHHHHhhccCCC----C
Q psy8182 725 DSSKMIAAFLNEVAAHGAEYVIPAMEELLLN----LEKES-----------YLMRNCTLTIVTELLINVYKREDL----S 785 (827)
Q Consensus 725 ~g~K~~s~FL~~Lae~~P~lvl~~~s~L~~~----Ld~Es-----------y~lR~aVlev~g~ii~~~l~~~~~----~ 785 (827)
.--.++...+..++...+.-+.+.+..+++. +.... +.+|.+++++++.++...-..... .
T Consensus 708 ~~~~~~~~~l~~i~~~~g~~~~~~l~~~~~~l~~~~~~~~~~~d~~~~~~~~~~r~~~~~~~~~i~~~~~~~~~~~~~~~ 787 (876)
T 1qgr_A 708 SVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDV 787 (876)
T ss_dssp GGHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHTCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSCCGGG
T ss_pred HhhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHccCcccccchH
Confidence 2223555667777776665544444444333 33221 389999999999998864321000 0
Q ss_pred hHHHHHHHHHHHHHHHhcCcC--ChhhhhHHHHHHHHhhcC
Q psy8182 786 DEAKEQRDEYLNVLLDHMHDV--HTFVRTKVSTEKKLECWQ 824 (827)
Q Consensus 786 e~~k~~rd~~ld~L~er~~D~--nayVRsKvlq~~~~lc~~ 824 (827)
+..+.-...++..|.....|- +.-||..++.++.++|+.
T Consensus 788 ~~~~~~~~~i~~~l~~~~~~~~~~~~vr~~a~~~l~~l~~~ 828 (876)
T 1qgr_A 788 MLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTA 828 (876)
T ss_dssp GGSGGGHHHHHHHHHHHHTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 112222344454444444555 778999999999998863
No 9
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=98.60 E-value=3.4e-05 Score=91.34 Aligned_cols=466 Identities=13% Similarity=0.103 Sum_probs=269.1
Q ss_pred HHHHHHHHHHHhhCCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHH
Q psy8182 262 PLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNC 341 (827)
Q Consensus 262 ~~Ae~v~~l~~~~~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~a 341 (827)
.+..++..+...||.+.+.-++++-++ +.|-.--|-.-.++..+++..|.+++--++.+.+-|.+++..+|..
T Consensus 58 ~l~Kli~l~~~G~d~s~~~~~vvkl~~-------s~~~~~Krl~YL~l~~~~~~~~e~~~L~iN~l~kDl~~~n~~ir~l 130 (621)
T 2vgl_A 58 YVCKLLFIFLLGHDIDFGHMEAVNLLS-------SNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGL 130 (621)
T ss_dssp HHHHHHHHHHHSCCCCSCHHHHHHGGG-------CSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred HHHHHHHHHHcCCCCchhHHHHHHHhc-------CCCHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 344445555555566666667777442 2455667778889999999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhh--cccchhHHHHHHHHHHHHHhCC--CCChHHHHHHHHHHHhh
Q psy8182 342 TLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHM--HDVHTFVRTKVLQLFQRLVLDK--AIPVAFTLKLLERAIGR 417 (827)
Q Consensus 342 vle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~--~D~n~~vRskvLq~~~~L~~~~--~iP~~~~~~v~~~av~R 417 (827)
.+.++|+|... +.-+.+...+..-+ .|.+||||.+|.-++.+++... .+|. ..+.+....-
T Consensus 131 ALr~L~~i~~~------------e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~~---~~~~~~l~~l 195 (621)
T 2vgl_A 131 ALHCIANVGSR------------EMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPM---GDWTSRVVHL 195 (621)
T ss_dssp HHHHHHHHCCH------------HHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCCC---CSCHHHHHHH
T ss_pred HHHHhhccCCH------------HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcCc---hhHHHHHHHH
Confidence 99999998532 23456677777777 8999999999999999999943 3442 2455566667
Q ss_pred cCCCChHHHHHHHHHHHHHHhhCCCCCCCChhHHHHhhhhhhhhhhhHhhhhhh--cC-CC-------CchhhhhhhhhH
Q psy8182 418 LMDKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERIKDCFEA--LD-ND-------GPMFILENFDTL 487 (827)
Q Consensus 418 L~DKSs~VRk~Ai~Ll~~ll~~nPf~~~L~~~~~v~ev~~l~ei~~~L~e~~~A--l~-~e-------~~~~i~e~FD~l 487 (827)
|.|+++.|+.+|+.++..+...+|= .|..- ...+-+.|..+..+ .. ++ +|+..-.+++.+
T Consensus 196 L~d~d~~V~~~a~~~l~~i~~~~~~-------~~~~~---~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~w~qi~il~ll 265 (621)
T 2vgl_A 196 LNDQHLGVVTAATSLITTLAQKNPE-------EFKTS---VSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLL 265 (621)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHCHH-------HHTTH---HHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHHHHHG
T ss_pred hCCCCccHHHHHHHHHHHHHHhChH-------HHHHH---HHHHHHHHHHHHhCCCCCccchhhcCCCCchHHHHHHHHH
Confidence 8999999999999999999988871 12111 11122222222221 10 11 333333344433
Q ss_pred HHhhhccccc-cHHHHHHHHHHHHHHHHHHHHHhHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q psy8182 488 YSMLTHFKSI-EYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHK 566 (827)
Q Consensus 488 ySll~~~~~l-~~~~~~~l~~~~l~~~~s~l~~~l~~~~~~~~~~~~~~~~~~~~lkm~~fLl~~~~~~~e~~~~~~~~~ 566 (827)
.. +... ++..+.++. +.|...++.+. . ..... ...|.|.-.+.+|=..+.+.......
T Consensus 266 ~~----~~~~~d~~~~~~l~-~~L~~il~~~~----~---~~ks~---~l~~~n~~~aVl~ea~~~i~~l~~~~------ 324 (621)
T 2vgl_A 266 QC----YPPPEDPAVRGRLT-ECLETILNKAQ----E---PPKSK---KVQHSNAKNAVLFEAISLIIHHDSEP------ 324 (621)
T ss_dssp GG----SSSCSSHHHHHHHH-HHHHHHHHHHH----S---CCSCS---SHHHHHHHHHHHHHHHHHHHHHCCCH------
T ss_pred HH----hCCCCCHHHHHHHH-HHHHHHHHhhc----c---Ccccc---cccccchHHHHHHHHHHHHHhcCCcH------
Confidence 32 2222 356667777 66543333221 0 00000 23466655555555555554443100
Q ss_pred hhhhhhhhhhhhhhhhhhcccccCcchhhHHHHHHHHHHHhccccccccCCChhhHHHHHHHHHHHHHHhc-cccccccc
Q psy8182 567 IVIDAKARKVKVRAAIKHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIE-DPCIASVK 645 (827)
Q Consensus 567 ~~~~~kg~k~~~~~~~~~~~~~~~~W~~~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~y~lLE-~~~~~~~K 645 (827)
.... ..-+.=. ..-. . .-.+-|-.+|..|.++.+.. |. ..++.-....++.+|. ++
T Consensus 325 ~~~~-~~~~~L~----~~L~--~-~~~niry~aL~~l~~l~~~~------~~---~~~~~~~~~~i~~~L~~d~------ 381 (621)
T 2vgl_A 325 NLLV-RACNQLG----QFLQ--H-RETNLRYLALESMCTLASSE------FS---HEAVKTHIETVINALKTER------ 381 (621)
T ss_dssp HHHH-HHHHHHH----HHSS--C-SCHHHHHHHHHHHHHHTTCT------TT---HHHHHTTHHHHHHHHTTCC------
T ss_pred HHHH-HHHHHHH----HHhc--C-CCcchHHHHHHHHHHHHhcc------Cc---HHHHHHHHHHHHHHhccCC------
Confidence 0000 0000000 0000 0 11234667888888888653 11 2455555566667776 66
Q ss_pred hHHHHHHHHHHHHHHHHhhCcchhhHHHHH-HHHhhhcccch----HHHHHHHHHHHhcC--CcchHHHHHHHHhcccCC
Q psy8182 646 HKELRVFIFQIVGYLIKRYNHGISCTVKIV-QLLKNCEHLVS----PLAQAVVMFIRNHG--CKSLVREIVREISAMEDG 718 (827)
Q Consensus 646 ~~~ir~~if~il~~~vk~y~h~~~~~~~Ii-qlL~~~Ehl~~----~~Ae~v~~l~~~~~--~~~l~~eilreI~~~~~~ 718 (827)
+..+|....+++..++..-| ...|+ +++.|...... -+...+..+++.|. ....++-+++=+. .
T Consensus 382 d~~Ir~~aL~lL~~l~~~~N-----v~~Iv~eL~~yl~~~d~~~~~~~v~~I~~la~k~~~~~~~~v~~Ll~ll~-~--- 452 (621)
T 2vgl_A 382 DVSVRQRAVDLLYAMCDRSN-----AQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIR-I--- 452 (621)
T ss_dssp CHHHHHHHHHHHHHHCCHHH-----HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCSSTHHHHHHHHHHHH-H---
T ss_pred CHhHHHHHHHHHHHHcChhh-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH-h---
Confidence 47899999999887775422 23444 34544444332 22333555565653 2223322222222 1
Q ss_pred CccCCCcchhHHHHHHHHHHHHhHHHHHhhHHHHHhhhCCCChhHHhHHHHHHHHHHHH----hhccCCCChHHHHHHHH
Q psy8182 719 NENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLIN----VYKREDLSDEAKEQRDE 794 (827)
Q Consensus 719 d~~~Ds~g~K~~s~FL~~Lae~~P~lvl~~~s~L~~~Ld~Esy~lR~aVlev~g~ii~~----~l~~~~~~e~~k~~rd~ 794 (827)
+.+ -....+..++..+....|.+=-.-+..|...++... .+.+++.+++-++-. +...+... -..
T Consensus 453 --~~~-~v~~ev~~~l~~ii~~~~~~~~~~~~~l~~~l~~~~--~~~~li~~~~wilGEy~~~~~~~~~~~------p~~ 521 (621)
T 2vgl_A 453 --AGD-YVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPA--CHENLVKVGGYILGEFGNLIAGDPRSS------PLI 521 (621)
T ss_dssp --HGG-GSCSHHHHHHHHHHGGGCSCHHHHHHHHHHHHTSSS--CCHHHHHHHHHHHHHHTHHHHSSTTSC------HHH
T ss_pred --hcc-cchHHHHHHHHHHHhCChhHHHHHHHHHHHHHcCcc--chHHHHHHHHHHhcchHHHhcccCCCC------HHH
Confidence 122 244555666677766666543334455566665443 345666444433332 22111111 125
Q ss_pred HHHHHHHhcCcCChhhhhHHHHHHHHhhc
Q psy8182 795 YLNVLLDHMHDVHTFVRTKVSTEKKLECW 823 (827)
Q Consensus 795 ~ld~L~er~~D~nayVRsKvlq~~~~lc~ 823 (827)
+|+.|.+||.+.++-||.-+|+.+.|+.-
T Consensus 522 ~l~~l~~~~~~~~~~v~~~~Lta~~Kl~~ 550 (621)
T 2vgl_A 522 QFNLLHSKFHLCSVPTRALLLSTYIKFVN 550 (621)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999864
No 10
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=98.60 E-value=7.3e-05 Score=91.15 Aligned_cols=206 Identities=13% Similarity=0.149 Sum_probs=136.4
Q ss_pred cHHHHHHHHHHHHHHHHHhccccc------hhhhHHHHhhhcc-cccHHHHHHHHHHHHhh---CCCchHHHHHHHHhcc
Q psy8182 221 HKELRVFIFQIVGYLIKRYNHGIS------CTVKIVQLLKNCE-HLVSPLAQAVVMFIRNH---GCKSLVREIVREISAM 290 (827)
Q Consensus 221 ~~~~r~~if~il~~~vk~~~~~~~------~~~~IiqlL~~~e-hl~~~~Ae~v~~l~~~~---~~~~l~~~ilreI~~~ 290 (827)
+..+|....-.+.-.++++-.... +...+++.|..-+ ..-...|+.+..+.... .-+.+...++.-+..
T Consensus 61 ~~~vR~~a~~~Lkn~i~~~w~~~~~~~~~~ik~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~~wp~ll~~L~~~l~~- 139 (852)
T 4fdd_A 61 DEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDS- 139 (852)
T ss_dssp CHHHHHHHHHHHHHHTTTSGGGCCHHHHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHTTTTTCTTHHHHHHHHHSC-
T ss_pred ChHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHcC-
Confidence 467777777777666655322221 2334555544211 12235566666666643 234666666655422
Q ss_pred ccCCCcCCchhhhHHHHHHHHHHHHhHHHHH---------hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCch
Q psy8182 291 EDGNENAGQDSSKMIAAFLNEVAAHGAEYVI---------PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSD 361 (827)
Q Consensus 291 ~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l---------~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~ 361 (827)
.|...-.....-|.++.+..|..+- .-+..+.+.+.+++..+|.+.++++++++.. ..+
T Consensus 140 ------~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~------~~~ 207 (852)
T 4fdd_A 140 ------EDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIIS------RTQ 207 (852)
T ss_dssp ------SSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTT------TCH
T ss_pred ------CCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc------ccH
Confidence 2333334445566777777776642 2345566678889999999999999876632 112
Q ss_pred HHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCC-CChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 362 EAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKA-IPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 362 ~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~-iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
......+.++..|.....|.++-||..|++++..|++... .-..+...++......+.|+...||..|+.++.++.+.
T Consensus 208 ~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~ 286 (852)
T 4fdd_A 208 ALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQ 286 (852)
T ss_dssp HHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHhcc
Confidence 2333457889999999999999999999999999999531 11223467888888889999999999999999997653
No 11
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=98.36 E-value=0.0037 Score=79.24 Aligned_cols=173 Identities=13% Similarity=0.098 Sum_probs=103.2
Q ss_pred HHHHHHhccccccccchHHHHHHHHHHHHHHHHhhCcchhhHHHHHHHHhhhcccchHHHHHHHHHHHhcCCcc---hHH
Q psy8182 630 NCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKS---LVR 706 (827)
Q Consensus 630 ~~~y~lLE~~~~~~~K~~~ir~~if~il~~~vk~y~h~~~~~~~IiqlL~~~Ehl~~~~Ae~v~~l~~~~~~~~---l~~ 706 (827)
+....++.++ +..+|......||.++.. +...+-..|++.+..-..--..+...+..+.+.-+... .++
T Consensus 859 ~~~~~~l~~~------~~~Vr~aAa~aLg~l~~~--~~~~~lp~ll~~l~~~~~~~~~~l~al~e~i~~~~~~~~~~~~~ 930 (1230)
T 1u6g_C 859 SVILEAFSSP------SEEVKSAASYALGSISVG--NLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVE 930 (1230)
T ss_dssp HHHHHGGGCS------CHHHHHHHHHHHHHHHHH--THHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHSSCSTTTHHHHH
T ss_pred HHHHHHhCCC------CHHHHHHHHHHhHHHhcc--CHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCChhhHHhhHH
Confidence 4444466666 477999999999988743 33334455566664321111123333333333322222 223
Q ss_pred HHHHHHhcccCCCccCCCcchh-HHHHHHHHHHHHhHHHHHhhHHHHHhhhCCCChhHHhHHHHHHHHHHHHhhccCCCC
Q psy8182 707 EIVREISAMEDGNENAGQDSSK-MIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLS 785 (827)
Q Consensus 707 eilreI~~~~~~d~~~Ds~g~K-~~s~FL~~Lae~~P~lvl~~~s~L~~~Ld~Esy~lR~aVlev~g~ii~~~l~~~~~~ 785 (827)
.|+.-+-.. ...+..+.| ..+.-|-+|....|.-+++ .|...|.+++-.+|..++.+++.++. . ..
T Consensus 931 ~i~~~L~~~----~~~~~~~~r~~~a~~lg~l~~~~~~~l~p---~l~~~l~~~~~~~R~~~~~~l~~~~~----~--~~ 997 (1230)
T 1u6g_C 931 NIWALLLKH----CECAEEGTRNVVAECLGKLTLIDPETLLP---RLKGYLISGSSYARSSVVTAVKFTIS----D--HP 997 (1230)
T ss_dssp HHHHHHTTC----CCCSSTTHHHHHHHHHHHHHHSSGGGTHH---HHTTTSSSSCHHHHHHHHHHTGGGCC----S--SC
T ss_pred HHHHHHHHH----hcCcchhhHHHHHHHHhhhhccChHHHHH---HHHHHhcCCCHHHHHHHHHHHHHHHc----c--Cc
Confidence 333333221 122334556 6667788888777765555 56678888888999888888766552 1 12
Q ss_pred hHHHHHHHHHHHHHHHhcCcCChhhhhHHHHHHHHhhc
Q psy8182 786 DEAKEQRDEYLNVLLDHMHDVHTFVRTKVSTEKKLECW 823 (827)
Q Consensus 786 e~~k~~rd~~ld~L~er~~D~nayVRsKvlq~~~~lc~ 823 (827)
+......+.++..|..++.|.++-||.-++.++.-+..
T Consensus 998 ~~~~~~l~~~~~~ll~~l~d~~~~vr~~a~~~l~~~~~ 1035 (1230)
T 1u6g_C 998 QPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAH 1035 (1230)
T ss_dssp CTHHHHHHHHSTTTHHHHSSSSTHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 22334556677777788899999999999988876553
No 12
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=98.28 E-value=0.019 Score=69.11 Aligned_cols=426 Identities=10% Similarity=0.078 Sum_probs=218.5
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH-HHHHHHHHhhcccchhHHHHHHHHHHHHHhCC---
Q psy8182 325 EELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRD-EYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDK--- 400 (827)
Q Consensus 325 s~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd-~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~--- 400 (827)
..|...+.++...+|.+.+++++.++..... ....... .++..+...+.|.+..||..+++.|..+++..
T Consensus 227 ~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~------~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~ 300 (861)
T 2bpt_A 227 QVVCEATQAEDIEVQAAAFGCLCKIMSKYYT------FMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDI 300 (861)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHHHGG------GCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 3444567788999999999999999876421 1122334 78888889999999999999999999999852
Q ss_pred --------CCC-------hHHHHHHHHHHHhhcCC-------CChHHHHHHHHHHHHHHhhCCCCCCCChhHHHHhhhhh
Q psy8182 401 --------AIP-------VAFTLKLLERAIGRLMD-------KSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTL 458 (827)
Q Consensus 401 --------~iP-------~~~~~~v~~~av~RL~D-------KSs~VRk~Ai~Ll~~ll~~nPf~~~L~~~~~v~ev~~l 458 (827)
..| ......++...+..|.+ -...||+.|...|..+....| .. . +
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~--~~-----~------~ 367 (861)
T 2bpt_A 301 AYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCG--NH-----I------L 367 (861)
T ss_dssp HHHHHHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHG--GG-----G------H
T ss_pred hhhhhhccCCchhhHHHHHHHHHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHcc--Hh-----H------H
Confidence 111 12234566666666653 346899999999999877644 11 0 0
Q ss_pred hhhhhhHhhhhhhcCCCCchhhhhhhhhHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHhHhhhhcCCCCCHHHHHHH
Q psy8182 459 EEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKY 538 (827)
Q Consensus 459 ~ei~~~L~e~~~Al~~e~~~~i~e~FD~lySll~~~~~l~~~~~~~l~~~~l~~~~s~l~~~l~~~~~~~~~~~~~~~~~ 538 (827)
..+-+. +...+...+|..-......+-++.++.. +......+ ...+..+ -..+.+ .+...+.
T Consensus 368 ~~l~~~---l~~~l~~~~~~~r~~a~~~l~~i~~~~~---~~~~~~~l----~~il~~l----~~~l~d--~~~~vr~-- 429 (861)
T 2bpt_A 368 EPVLEF---VEQNITADNWRNREAAVMAFGSIMDGPD---KVQRTYYV----HQALPSI----LNLMND--QSLQVKE-- 429 (861)
T ss_dssp HHHHHH---HHHHTTCSSHHHHHHHHHHHHHTSSSSC---HHHHHHHH----HHHHHHH----HHGGGC--SCHHHHH--
T ss_pred HHHHHH---HHHHcCCCChhHHHHHHHHHHHHHcCCC---HHHHHHHH----HHHHHHH----HHHcCC--CcHHHHH--
Confidence 111111 1111222222211222223333332211 11111111 1011111 111211 1221111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh-hhccchhhhh--hhhhhhhhhhhhhcccccCcchhhHHHHHHHHHHHhcccccccc
Q psy8182 539 LNVVKMTLWVFTEFIINFETRLQ-KDYHKIVIDA--KARKVKVRAAIKHNEKMQWDWDFHLSNGLNSIHQILKSKINKLW 615 (827)
Q Consensus 539 ~~~lkm~~fLl~~~~~~~e~~~~-~~~~~~~~~~--kg~k~~~~~~~~~~~~~~~~W~~~r~~~L~~l~~~L~l~l~~lw 615 (827)
..++.+..+......... ...-....+. ++= .+ + ..-|..+..++..+.+.- .. .
T Consensus 430 -----~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~~l-----------~~---~-~~v~~~a~~al~~l~~~~-~~-~ 487 (861)
T 2bpt_A 430 -----TTAWCIGRIADSVAESIDPQQHLPGVVQACLIGL-----------QD---H-PKVATNCSWTIINLVEQL-AE-A 487 (861)
T ss_dssp -----HHHHHHHHHHHHHGGGSCTTTTHHHHHHHHHHHH-----------TS---C-HHHHHHHHHHHHHHHHHH-SS-S
T ss_pred -----HHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHh-----------cc---C-hHHHHHHHHHHHHHHHhc-cc-c
Confidence 122233333332211100 0000000000 000 00 1 112333333443333210 00 0
Q ss_pred CCChhhHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHhhCcchh-----hHHHHHHHHhhh---------
Q psy8182 616 DPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGIS-----CTVKIVQLLKNC--------- 681 (827)
Q Consensus 616 ~~~~~ee~Fi~l~~~~~y~lLE~~~~~~~K~~~ir~~if~il~~~vk~y~h~~~-----~~~~IiqlL~~~--------- 681 (827)
.+... ..|+.-+......++.++. .+..+|..+++.++.+++..|.... +-..+++.|...
T Consensus 488 ~~~~l-~~~~~~il~~L~~~l~~~d----~~~~vr~~a~~al~~l~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~i~~ 562 (861)
T 2bpt_A 488 TPSPI-YNFYPALVDGLIGAANRID----NEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLT 562 (861)
T ss_dssp SSCGG-GGGHHHHHHHHHHHHTCSC----CGGGHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHHTTSCGGGCC
T ss_pred cchhh-HHHHHHHHHHHHHHHhCcC----cchHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHHhhhcccCC
Confidence 01111 2345555566667776543 1346899999999999988765421 112233443322
Q ss_pred -------cccchHHHHHHHHHHHhcC--CcchHHHHHHHHhcccCCCccCCC-cchhHHHHHHHHHHHHhHHHHH----h
Q psy8182 682 -------EHLVSPLAQAVVMFIRNHG--CKSLVREIVREISAMEDGNENAGQ-DSSKMIAAFLNEVAAHGAEYVI----P 747 (827)
Q Consensus 682 -------Ehl~~~~Ae~v~~l~~~~~--~~~l~~eilreI~~~~~~d~~~Ds-~g~K~~s~FL~~Lae~~P~lvl----~ 747 (827)
..+-....+.+..+.+..+ .....+.++..+.+.-.. .++ .--......+..+++..+.-+. +
T Consensus 563 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~l~~~l~~~l~~---~~~~~v~~~~~~~l~~l~~~~~~~~~~~l~~ 639 (861)
T 2bpt_A 563 LEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEK---KDSAFIEDDVFYAISALAASLGKGFEKYLET 639 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHHHHS---TTGGGTHHHHHHHHHHHHHHHGGGGHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHcc---CCCCcHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 1111234445555555443 334555666555443211 111 2233344455666655443333 3
Q ss_pred hHHHHHhhhCCCChhHHhHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHhcCcCC--hhhhhHHHHHHHHhhc
Q psy8182 748 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVH--TFVRTKVSTEKKLECW 823 (827)
Q Consensus 748 ~~s~L~~~Ld~Esy~lR~aVlev~g~ii~~~l~~~~~~e~~k~~rd~~ld~L~er~~D~n--ayVRsKvlq~~~~lc~ 823 (827)
-+..|...|+.+.+.+|.+.++++|.++... + +....-.+.++..|.+.+.|-+ +-+|..++.++..++.
T Consensus 640 i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~--~----~~~~~~~~~l~~~l~~~l~~~~~~~~vr~~~~~~l~~l~~ 711 (861)
T 2bpt_A 640 FSPYLLKALNQVDSPVSITAVGFIADISNSL--E----EDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIAS 711 (861)
T ss_dssp HHHHHHHHHHCTTSHHHHHHHHHHHHHHHHT--G----GGGHHHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHh--c----hhccchHHHHHHHHHHHhCCccccHhhhHHHHHHHHHHHH
Confidence 3455666677889999999999999998643 1 2345556788888888887765 8899999999988764
No 13
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=98.19 E-value=0.0012 Score=73.25 Aligned_cols=135 Identities=14% Similarity=0.147 Sum_probs=92.9
Q ss_pred CCchhhhHHHHHHHHHHHH-hHHHHHhhHHHHHHhhcC--CCchHHHHHHHHHHHHHHHHhhc---------CCCchHHH
Q psy8182 297 AGQDSSKMIAAFLNEVAAH-GAEYVIPAMEELLLNLEK--ESYLMRNCTLTIVTELLINVYKR---------EDLSDEAK 364 (827)
Q Consensus 297 ~D~~g~k~~s~FL~~Lae~-~P~l~l~~is~l~~~Ld~--esy~lR~avle~~g~ii~~~~~~---------~~~~~~~~ 364 (827)
.|+..-|..-.+|.++.+. .|..+. .|...|.+ .+..+|.+....+.++|...-.. ...++
T Consensus 13 ~d~~~r~~Ae~~L~~~~~~~~~~~~~----~L~~il~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~~~~l~~--- 85 (462)
T 1ibr_B 13 PDRLELEAAQKFLERAAVENLPTFLV----ELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDA--- 85 (462)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCH---
T ss_pred CCHHHHHHHHHHHHHHHhhChHHHHH----HHHHHHHcCCCChHHHHHHHHHHHHhccccchHHHHHHHhhhhcCCH---
Confidence 4666667777888887764 565443 23333333 46899999999999988431000 01222
Q ss_pred HHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCC--ChHHHHHHHHHHHHHHhhC
Q psy8182 365 EQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDK--SSNVVKYTVQLLKTMIESN 440 (827)
Q Consensus 365 ~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DK--Ss~VRk~Ai~Ll~~ll~~n 440 (827)
..++.+-+.|.+.+.|.++.+ .++-+++..+.... .|...|..++...++.+.|. +..+|..|+..|..+....
T Consensus 86 ~~~~~ik~~ll~~l~~~~~~v-~~~~~~i~~ia~~~-~~~~~w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~ 161 (462)
T 1ibr_B 86 NARREVKNYVLQTLGTETYRP-SSASQCVAGIACAE-IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDI 161 (462)
T ss_dssp HHHHHHHHHHHHHTTCCCSSS-CSHHHHHHHHHHHH-GGGTCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCCCchh-hHHHHHHHHHHHHh-ccccccHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhC
Confidence 345555566666677888889 89999999988742 34435567777778888888 8899999999999988764
No 14
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=98.12 E-value=0.017 Score=73.06 Aligned_cols=135 Identities=14% Similarity=0.140 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHhHHHHH-hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcc-cc
Q psy8182 305 IAAFLNEVAAHGAEYVI-PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHD-VH 382 (827)
Q Consensus 305 ~s~FL~~Lae~~P~l~l-~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D-~n 382 (827)
-..-|..+++.+|.-.+ .-+..|...|.+++-.+|.+...++|.++...................++..|.+-+.| .+
T Consensus 68 A~~~L~~l~~~~~~~~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~ 147 (1230)
T 1u6g_C 68 AVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQED 147 (1230)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCc
Confidence 33445555555544222 33556777787888889999999999888753211100111334567888888888885 88
Q ss_pred hhHHHHHHHHHHHHHhC-C--CCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 383 TFVRTKVLQLFQRLVLD-K--AIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 383 ~~vRskvLq~~~~L~~~-~--~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
+.+|..++.+|..+|+. + ..| +...++.....-|.|.++.||+.|+.-|..+....+
T Consensus 148 ~~~~~~al~~l~~~~~~~~~~l~~--~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~ 207 (1230)
T 1u6g_C 148 VSVQLEALDIMADMLSRQGGLLVN--FHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCG 207 (1230)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCTT--THHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC-
T ss_pred hHHHHHHHHHHHHHHHHhHhHHHH--HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999973 2 234 568899999999999999999999999999987654
No 15
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=97.92 E-value=0.034 Score=65.40 Aligned_cols=390 Identities=11% Similarity=0.046 Sum_probs=197.8
Q ss_pred HHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCCCCCCCh
Q psy8182 369 EYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFAAKATT 448 (827)
Q Consensus 369 ~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf~~~L~~ 448 (827)
-..+.|..-+.|.|+++|+-||.++..+... .....++......|.|+++.|||+|+.-+.++...+|= + .
T Consensus 107 l~in~l~kDL~~~n~~vr~lAL~~L~~i~~~-----~~~~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~---~-v 177 (618)
T 1w63_A 107 LMTNCIKNDLNHSTQFVQGLALCTLGCMGSS-----EMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE---L-M 177 (618)
T ss_dssp HHHHHHHHHHSCSSSHHHHHHHHHHHHHCCH-----HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGG---G-G
T ss_pred HHHHHHHHhcCCCCHhHHHHHHHHHHhcCCH-----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChH---H-H
Confidence 3455666667899999999999999998743 34467788888899999999999999999999999881 1 1
Q ss_pred hHHHHhhhhhh-hhhhh-Hhhh---hhhcCCCCch---hhhhhhhhHHHhhhcc-----------c-cccHHHHHHHHHH
Q psy8182 449 QYYVQAELTLE-EFNER-IKDC---FEALDNDGPM---FILENFDTLYSMLTHF-----------K-SIEYKILHNVYTK 508 (827)
Q Consensus 449 ~~~v~ev~~l~-ei~~~-L~e~---~~Al~~e~~~---~i~e~FD~lySll~~~-----------~-~l~~~~~~~l~~~ 508 (827)
..|..++..+= +-+.. ...+ ...+.+.+|. ......+.++.+++.. . .-++-.+.+++ +
T Consensus 178 ~~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~il-~ 256 (618)
T 1w63_A 178 EMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRIL-R 256 (618)
T ss_dssp GGGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSHHHHHHHHHTTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHHH-H
T ss_pred HHHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHcCCCCccccccCCCCChHHHHHH-H
Confidence 13322211110 00000 0111 0112233332 1112223333333321 1 12344555555 4
Q ss_pred HHHHHHHHHHHh-----------HhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccchhhhhhhhhhh
Q psy8182 509 LLLRSLKEFSSI-----------LDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHKIVIDAKARKVK 577 (827)
Q Consensus 509 ~l~~~~s~l~~~-----------l~~~~~~~~~~~~~~~~~~~~lkm~~fLl~~~~~~~e~~~~~~~~~~~~~~kg~k~~ 577 (827)
.|. .++.. +..++...+. .+|.-.+.+|=..+.+..... .+.. +. ...
T Consensus 257 ~L~----~l~~~~~~~~~~~~~~L~~l~~~~~~-------~~~~~~aV~~ea~~~i~~l~~------~~~l---~~-~a~ 315 (618)
T 1w63_A 257 LLR----ILGRNDDDSSEAMNDILAQVATNTET-------SKNVGNAILYETVLTIMDIKS------ESGL---RV-LAI 315 (618)
T ss_dssp HHH----HHTTTCHHHHHTTHHHHHHHHHTSCC-------SSTHHHHHHHHHHHHHHHSCC------CHHH---HH-HHH
T ss_pred HHH----HhCCCCHHHHHHHHHHHHHHHhcccc-------ccchHHHHHHHHHHHHHhcCC------CHHH---HH-HHH
Confidence 442 22211 0000000000 001111222222222222110 0000 00 000
Q ss_pred hhhhhhhcccccCcchhhHHHHHHHHHHHhccccccccCCChhhHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHH
Q psy8182 578 VRAAIKHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIV 657 (827)
Q Consensus 578 ~~~~~~~~~~~~~~W~~~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~y~lLE~~~~~~~K~~~ir~~if~il 657 (827)
..- ...... .-..-|.-+|..|.++.+.+ | ..+.-....++.++.++. ..+|...+.++
T Consensus 316 ~~L-~~~L~~---~d~~vr~~aL~~L~~i~~~~------p-----~~~~~~~~~i~~~l~d~d------~~Ir~~alelL 374 (618)
T 1w63_A 316 NIL-GRFLLN---NDKNIRYVALTSLLKTVQTD------H-----NAVQRHRSTIVDCLKDLD------VSIKRRAMELS 374 (618)
T ss_dssp HHH-HHHHTC---SSTTTHHHHHHHHHHHHHHH------H-----HHHGGGHHHHHHGGGSSC------HHHHHHHHHHH
T ss_pred HHH-HHHHhC---CCCchHHHHHHHHHHHHhhC------H-----HHHHHHHHHHHHHccCCC------hhHHHHHHHHH
Confidence 000 000000 01233667777777777643 1 111112234455566663 67899999988
Q ss_pred HHHHHhhCcchhhHHHHH-HHHhhhcccc----hHHHHHHHHHHHhcC--CcchHHHHHHHHhcccCCCccCCCcchhHH
Q psy8182 658 GYLIKRYNHGISCTVKIV-QLLKNCEHLV----SPLAQAVVMFIRNHG--CKSLVREIVREISAMEDGNENAGQDSSKMI 730 (827)
Q Consensus 658 ~~~vk~y~h~~~~~~~Ii-qlL~~~Ehl~----~~~Ae~v~~l~~~~~--~~~l~~eilreI~~~~~~d~~~Ds~g~K~~ 730 (827)
...+..-| + ..|+ +++.|.++.. .-.+..+..++..|. ....+.-++.-+.... ......+
T Consensus 375 ~~l~~~~n----v-~~iv~eL~~~l~~~d~e~r~~~v~~I~~la~k~~~~~~~~v~~ll~lL~~~~-------~~v~~~~ 442 (618)
T 1w63_A 375 FALVNGNN----I-RGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAG-------SYVRDDA 442 (618)
T ss_dssp HHHCCSSS----T-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTG-------GGSCSSH
T ss_pred HHHccccc----H-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHhcc-------chhHHHH
Confidence 88775433 2 2233 4555554433 345556777777773 2334444443333211 1122345
Q ss_pred HHHHHHHHHHhHHHHHhhHHHHHhhhCC--CChhHHhHHHHHHHHHHHHhhccCCCChH-----HHHHHHHHHHHHHHhc
Q psy8182 731 AAFLNEVAAHGAEYVIPAMEELLLNLEK--ESYLMRNCTLTIVTELLINVYKREDLSDE-----AKEQRDEYLNVLLDHM 803 (827)
Q Consensus 731 s~FL~~Lae~~P~lvl~~~s~L~~~Ld~--Esy~lR~aVlev~g~ii~~~l~~~~~~e~-----~k~~rd~~ld~L~er~ 803 (827)
...+.++-...|.+--.-+..|...|++ +.-.++++++.++|+.-..+..+. .++. .-..--.++..+.+.+
T Consensus 443 ~~~l~~ii~~~p~l~~~~v~~L~~~l~~~~~~~~~~~~~~wilGEy~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~ 521 (618)
T 1w63_A 443 VPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQ-CEEEEPIQVTEDEVLDILESVLISN 521 (618)
T ss_dssp HHHHHHHHHHSCSTHHHHHHHHHHHHHHCCSCSHHHHHHHHHHHHHHHHHTTCC-CSSSCCCCCCHHHHHHHHHHHHHST
T ss_pred HHHHHHHHhcChhHHHHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHHhcccc-cccccccCCCHHHHHHHHHHHHhcc
Confidence 6677777778887655556667777663 556777889999999976554421 1110 0111122333344444
Q ss_pred CcCChhhhhHHHHHHHHhhcC
Q psy8182 804 HDVHTFVRTKVSTEKKLECWQ 824 (827)
Q Consensus 804 ~D~nayVRsKvlq~~~~lc~~ 824 (827)
+.++.||.-+++.+.|+.-.
T Consensus 522 -~~~~~vr~~~lta~~Kl~~~ 541 (618)
T 1w63_A 522 -MSTSVTRGYALTAIMKLSTR 541 (618)
T ss_dssp -TCCHHHHHHHHHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHHHHHHHh
Confidence 68999999999999998754
No 16
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=97.74 E-value=0.1 Score=64.33 Aligned_cols=126 Identities=11% Similarity=0.091 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHhHHHHHhhHHHH-HHhhcC-----CCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHH
Q psy8182 303 KMIAAFLNEVAAHGAEYVIPAMEEL-LLNLEK-----ESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLD 376 (827)
Q Consensus 303 k~~s~FL~~Lae~~P~l~l~~is~l-~~~Ld~-----esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~e 376 (827)
|..+.+|..++...|..+++.+... ...+.+ +++.-|.|.+-++|.+...... ........++..| -
T Consensus 439 ~~~~~~l~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~------~~~~~l~~l~~~l-~ 511 (971)
T 2x1g_F 439 QDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGG------EEKRQIPRLMRVL-A 511 (971)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------------CHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcCh------hhhHHHHHHHHHH-H
Confidence 5677899999998886666554433 333443 6889999999999987433221 1123455667644 3
Q ss_pred hhc--ccchhHHHHHHHHHHHHHhC-CCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 377 HMH--DVHTFVRTKVLQLFQRLVLD-KAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 377 r~~--D~n~~vRskvLq~~~~L~~~-~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
.+. |.++.||..++.++.++++- ..-| .+...++......| | .-|+.+|...+..+.+.
T Consensus 512 ~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~-~~l~~vl~~l~~~l-~--~~v~~~A~~al~~l~~~ 573 (971)
T 2x1g_F 512 EIPYEKLNVKLLGTALETMGSYCNWLMENP-AYIPPAINLLVRGL-N--SSMSAQATLGLKELCRD 573 (971)
T ss_dssp HSCTTTSCHHHHHHHHHHHHHTHHHHC-----CHHHHHHHHHHHH-H--SSCHHHHHHHHHHHHHH
T ss_pred hcCccccCHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHh-C--hHHHHHHHHHHHHHHHH
Confidence 333 78999999999999999983 3334 56788888888888 6 67999999999999876
No 17
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=97.44 E-value=0.066 Score=62.50 Aligned_cols=204 Identities=12% Similarity=0.109 Sum_probs=133.8
Q ss_pred ccHHHHHHHHHHHHHHHHH-hccccchhhhHHHHhhhcccccHHHHHHHHHHHHhhCCCchHHHHHHHHhccccCCCcCC
Q psy8182 220 KHKELRVFIFQIVGYLIKR-YNHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAG 298 (827)
Q Consensus 220 K~~~~r~~if~il~~~vk~-~~~~~~~~~~IiqlL~~~ehl~~~~Ae~v~~l~~~~~~~~l~~~ilreI~~~~~~d~~~D 298 (827)
++..+|...+-.+....+. .....-+.+++...|+ |-.+++-......--..+.+.+.+.++..+-+.- . ..+
T Consensus 61 ~~~~~Krl~yl~l~~~~~~~~e~~~l~~n~l~kdL~---~~n~~ir~~AL~~L~~i~~~~~~~~l~~~l~~~L-~--d~~ 134 (591)
T 2vgl_B 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE---DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCL-K--DED 134 (591)
T ss_dssp SCHHHHHHHHHHHHHHHHHSHHHHHTTHHHHGGGSS---SSSHHHHHHHHHHHHTCCSGGGHHHHHHHHHHHS-S--CSC
T ss_pred CCHHHHHHHHHHHHHHcccCchHHHHHHHHHHHHcC---CCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHc-C--CCC
Confidence 3456776666666655553 2222233344444443 3333332222222234466777777766665433 2 245
Q ss_pred chhhhHHHHHHHHHHHHhHHHHH--hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHH
Q psy8182 299 QDSSKMIAAFLNEVAAHGAEYVI--PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLD 376 (827)
Q Consensus 299 ~~g~k~~s~FL~~Lae~~P~l~l--~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~e 376 (827)
+.--|..+.=+.++....|..+- .-+..|..+|++++..+|.+.+.+++++.... .+. .....-...+..|..
T Consensus 135 ~~VRk~A~~al~~i~~~~p~~~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~---~~~--~~~~l~~~~~~~Ll~ 209 (591)
T 2vgl_B 135 PYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESH---PNS--NLLDLNPQNINKLLT 209 (591)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSC---CSC--CSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhChhhcccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhC---CCc--cchhccHHHHHHHHH
Confidence 66667888888999999998775 35688999999999999999999999975421 110 000011234555556
Q ss_pred hhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHH
Q psy8182 377 HMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMI 437 (827)
Q Consensus 377 r~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll 437 (827)
.+.|.+++.+.++|+++.+++.. +......+++.....|++.++.||-.|++.+..+.
T Consensus 210 ~l~~~~~~~q~~il~~l~~l~~~---~~~~~~~~l~~l~~~l~~~~~~V~~ea~~~i~~l~ 267 (591)
T 2vgl_B 210 ALNECTEWGQIFILDCLSNYNPK---DDREAQSICERVTPRLSHANSAVVLSAVKVLMKFL 267 (591)
T ss_dssp HHHHCCHHHHHHHHHHHHTSCCC---SHHHHHHHHHHHTTCSCSSTTHHHHHHHHHHHHSC
T ss_pred cCCCCCchHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHh
Confidence 66789999999999999888743 22344678888999999999999999999998753
No 18
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=97.38 E-value=0.54 Score=57.95 Aligned_cols=249 Identities=10% Similarity=0.080 Sum_probs=141.5
Q ss_pred cchHhHHHHHHHHHHHhcchhhcccCCCcchhHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHhccccch
Q psy8182 166 DWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISC 245 (827)
Q Consensus 166 ~W~~~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~~~ 245 (827)
.|..-+..++..+.++++.--..+ ..++.-+...++.++.+... ..+...++...++.+..+++. ...
T Consensus 258 ~~~~vk~~~~~~l~~l~~~~~~~f-------~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~fl~~~~~~-~~~--- 325 (960)
T 1wa5_C 258 VLIKVKSSIQELVQLYTTRYEDVF-------GPMINEFIQITWNLLTSISN-QPKYDILVSKSLSFLTAVTRI-PKY--- 325 (960)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHH-------HHHHHHHHHHHHHHHHHCCS-CTTSHHHHHHHHHHHHHHHTS-HHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHhcCC-CcCcHHHHHHHHHHHHHHhCc-HhH---
Confidence 444445556666666665332222 13455566667777764221 125678888888888776642 110
Q ss_pred hhhHHHHhhhcccccHHHHH-HHHHHH------HhhCCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHH
Q psy8182 246 TVKIVQLLKNCEHLVSPLAQ-AVVMFI------RNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAE 318 (827)
Q Consensus 246 ~~~IiqlL~~~ehl~~~~Ae-~v~~l~------~~~~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~ 318 (827)
.+.++..+|+..-+.. .+..+. +.++.. .++-+|+= .+.. ...+.-+.-..||..|+...|+
T Consensus 326 ----~~~~~~~~~l~~li~~~i~~~m~~~~~d~e~w~~d--p~e~i~~d--~e~~---d~~s~R~aa~~~L~~l~~~~~~ 394 (960)
T 1wa5_C 326 ----FEIFNNESAMNNITEQIILPNVTLREEDVELFEDD--PIEYIRRD--LEGS---DTDTRRRACTDFLKELKEKNEV 394 (960)
T ss_dssp ----HGGGCSHHHHHHHHHHTHHHHHSCCGGGTTTTTTC--HHHHHHHH--HHC-------CHHHHHHHHHHHHHHHCHH
T ss_pred ----HHHHcCchHHHHHHHHHhHHhcCCCHHHHHHHhcC--HHHHHHhc--cCcc---cccCcHHHHHHHHHHHHHHcch
Confidence 0111111222211100 111110 011111 12233321 1112 1234567888999999999998
Q ss_pred HHHhhHHH-HHHhhc------CCCchHHHHHHHHHHHHHHHHhhcC-CCch-HHHHHHHHHH-HHHHHhhccc---chhH
Q psy8182 319 YVIPAMEE-LLLNLE------KESYLMRNCTLTIVTELLINVYKRE-DLSD-EAKEQRDEYL-NVLLDHMHDV---HTFV 385 (827)
Q Consensus 319 l~l~~is~-l~~~Ld------~esy~lR~avle~~g~ii~~~~~~~-~~~~-~~~~~rd~ll-~~L~er~~D~---n~~v 385 (827)
.+++.+.. +...|. ++.+..|-|.+-++|.+.......+ .... +..-+...++ ..+.--+.|. +++|
T Consensus 395 ~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v~p~l~~~~~~~p~v 474 (960)
T 1wa5_C 395 LVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIIL 474 (960)
T ss_dssp HHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHHHHCSSCSCHHH
T ss_pred hHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHHHHHHhHHHhcCCCCCCcee
Confidence 87755443 344455 6778999999999998743211000 0000 0000223332 3344445666 9999
Q ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 386 RTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 386 RskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
|.+++.++.++++. ++......++...+..|.|.+.-||-+|..-|..|++.
T Consensus 475 r~~a~~~lg~~~~~--~~~~~l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~ 526 (960)
T 1wa5_C 475 RVDAIKYIYTFRNQ--LTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTI 526 (960)
T ss_dssp HHHHHHHHHHTGGG--SCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHhh--CCHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhc
Confidence 99999999999985 46677889999999999999999999999999998873
No 19
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=97.38 E-value=0.0037 Score=64.15 Aligned_cols=108 Identities=15% Similarity=0.187 Sum_probs=86.5
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhc-ccchhHHHHHHHHHHHHHhC-CCCCh
Q psy8182 327 LLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMH-DVHTFVRTKVLQLFQRLVLD-KAIPV 404 (827)
Q Consensus 327 l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~-D~n~~vRskvLq~~~~L~~~-~~iP~ 404 (827)
+...+++.+|..|.+.++.++.++...-.- .... ...++..|..++. |.|+-||..+++++..|+.. +.--.
T Consensus 20 l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~--~~~~----~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~ 93 (242)
T 2qk2_A 20 FYDKLEEKKWTLRKESLEVLEKLLTDHPKL--ENGE----YGALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFS 93 (242)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHCSSB--CCCC----CHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGH
T ss_pred HHhhhccCCHHHHHHHHHHHHHHHccCCCC--CCCC----HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHH
Confidence 667788999999999999999998752111 1111 2467888999995 99999999999999999973 22122
Q ss_pred HHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhC
Q psy8182 405 AFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESN 440 (827)
Q Consensus 405 ~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~n 440 (827)
.+...++.....++.|++..||.+|...|.+++...
T Consensus 94 ~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~ 129 (242)
T 2qk2_A 94 NYASACVPSLLEKFKEKKPNVVTALREAIDAIYAST 129 (242)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 455789999999999999999999999999998754
No 20
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=97.34 E-value=0.0032 Score=69.72 Aligned_cols=234 Identities=12% Similarity=0.132 Sum_probs=139.0
Q ss_pred hHHHHHHHHHHHhcchhhcccCCCcchhHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHhccccc-hhh-
Q psy8182 170 HLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGIS-CTV- 247 (827)
Q Consensus 170 ~r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~~-~~~- 247 (827)
-|..+++++..++.. .......+.|...+...+...+.++ +..+|..++++++..+..|+..+. .-.
T Consensus 190 vr~~a~~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~------~~~vr~~~~~~l~~l~~~~~~~~~~~~~~ 258 (462)
T 1ibr_B 190 VKLAATNALLNSLEF-----TKANFDKESERHFIMQVVCEATQCP------DTRVRVAALQNLVKIMSLYYQYMETYMGP 258 (462)
T ss_dssp HHHHHHHHHHHHTTT-----THHHHTSHHHHHHHHHHHHHHTTCS------SHHHHHHHHHHHHHHHHHCGGGCTTTTTT
T ss_pred HHHHHHHHHHHHHHH-----HHHhhhhhHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666777666532 0001111224445555555665544 468999999999999988764332 111
Q ss_pred hHHHH----hhhc-ccccHHHHHHHHHHHHhh-------------------CC--------CchHHHHHHHHhccccCCC
Q psy8182 248 KIVQL----LKNC-EHLVSPLAQAVVMFIRNH-------------------GC--------KSLVREIVREISAMEDGNE 295 (827)
Q Consensus 248 ~Iiql----L~~~-ehl~~~~Ae~v~~l~~~~-------------------~~--------~~l~~~ilreI~~~~~~d~ 295 (827)
.+++. +... +.+.....+++..+.+.- .. +.++..+++-++..+..+.
T Consensus 259 ~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~ 338 (462)
T 1ibr_B 259 ALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDD 338 (462)
T ss_dssp THHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccc
Confidence 33332 2211 111122234444443321 01 2333444444443321111
Q ss_pred cCCchhhhHHHHHHHHHHHHhHHHHHhh-HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHH
Q psy8182 296 NAGQDSSKMIAAFLNEVAAHGAEYVIPA-MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVL 374 (827)
Q Consensus 296 ~~D~~g~k~~s~FL~~Lae~~P~l~l~~-is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L 374 (827)
..+...-+..+..|..+++..|+.+++. +..+...|.++++..|.+.+.++|.+.... . .+..+.....++..|
T Consensus 339 ~~~~~~r~~a~~~L~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~~----~-~~~~~~~l~~~~~~l 413 (462)
T 1ibr_B 339 DDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGP----E-PSQLKPLVIQAMPTL 413 (462)
T ss_dssp TTCCSHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSS----C-TTTTCTTTTTHHHHH
T ss_pred cccchHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCC----c-HHHHHHHHHHHHHHH
Confidence 1233455678899999999998766654 445566788999999999999999887421 1 011122346789999
Q ss_pred HHhhcccchhHHHHHHHHHHHHHhCC--CC-ChHHHHHHHHHHHhhcC
Q psy8182 375 LDHMHDVHTFVRTKVLQLFQRLVLDK--AI-PVAFTLKLLERAIGRLM 419 (827)
Q Consensus 375 ~er~~D~n~~vRskvLq~~~~L~~~~--~i-P~~~~~~v~~~av~RL~ 419 (827)
...+.|.++.||..|..++.++++.- .+ +..+...++......|+
T Consensus 414 ~~~l~d~~~~Vr~~a~~~l~~~~~~~~~~~~~~~~l~~ll~~Ll~~L~ 461 (462)
T 1ibr_B 414 IELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLS 461 (462)
T ss_dssp HHGGGCSCHHHHHHHHHHHHHHHHHGGGGCCSTTTHHHHHHHHHCC--
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999842 22 33566778877776664
No 21
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=97.28 E-value=0.0056 Score=62.74 Aligned_cols=125 Identities=12% Similarity=0.171 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccc
Q psy8182 303 KMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVH 382 (827)
Q Consensus 303 k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n 382 (827)
+.++.+...+....-..+-.-+..|+..+.+.+..+|.+..+++..++... .-+.+++.|.+.+.|.|
T Consensus 79 ~~l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~------------~~~~ll~~l~~~l~~~~ 146 (242)
T 2qk2_A 79 KCLALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYAST------------SLEAQQESIVESLSNKN 146 (242)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS------------CHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHcCCC
Confidence 333333333333332333344567777888899999999999999987631 13578899999999999
Q ss_pred hhHHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 383 TFVRTKVLQLFQRLVLDK---AIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 383 ~~vRskvLq~~~~L~~~~---~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
+.||..++..+..+.... ..+..+...++.....-|.|...-||++|+..+..+...
T Consensus 147 ~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~ 206 (242)
T 2qk2_A 147 PSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKL 206 (242)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Confidence 999999999999977652 355667789999999999999999999999999988754
No 22
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=97.09 E-value=0.43 Score=58.48 Aligned_cols=128 Identities=13% Similarity=0.026 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHHHhHHHHHhhHH-HHHHhh----cCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHh
Q psy8182 303 KMIAAFLNEVAAHGAEYVIPAME-ELLLNL----EKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDH 377 (827)
Q Consensus 303 k~~s~FL~~Lae~~P~l~l~~is-~l~~~L----d~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er 377 (827)
+..+.+|..++...|..+++.+. .+...+ +++++.-|.|.+-++|.+.......+ +.....++..|. .
T Consensus 425 ~~~~~~L~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~w~~~eaal~al~~i~~~~~~~~------~~~l~~l~~~l~-~ 497 (963)
T 2x19_B 425 VDISDTLMYVYEMLGAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNY------SDVVPGLIGLIP-R 497 (963)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHHHHHHTTSCCSSC------CSHHHHHHHHGG-G
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHhhcCchh------hHHHHHHHHHHH-h
Confidence 56777899999999877766554 344446 77889999999999998765432211 123445666443 5
Q ss_pred hcccchhHHHHHHHHHHHHHhC-CCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhC
Q psy8182 378 MHDVHTFVRTKVLQLFQRLVLD-KAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESN 440 (827)
Q Consensus 378 ~~D~n~~vRskvLq~~~~L~~~-~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~n 440 (827)
+.+-++.||..++.++.+.++- ..-| .+...++......|.| .-||..|...|.++.+..
T Consensus 498 l~~~~~~vr~~~~~~l~~~~~~l~~~~-~~l~~vl~~l~~~l~~--~~V~~~A~~al~~l~~~~ 558 (963)
T 2x19_B 498 ISISNVQLADTVMFTIGALSEWLADHP-VMINSVLPLVLHALGN--PELSVSSVSTLKKICREC 558 (963)
T ss_dssp SCCCSHHHHHHHHHHHHHTHHHHHHCH-HHHTTTHHHHHHHTTC--GGGHHHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhCC--chHHHHHHHHHHHHHHHH
Confidence 5656899999999999998873 2123 4567788888888987 689999999999998764
No 23
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=96.92 E-value=0.044 Score=54.31 Aligned_cols=183 Identities=15% Similarity=0.150 Sum_probs=111.8
Q ss_pred HHHHhccccccccccHHHHHHHHHHHHHHHHHhccccchhhhHHHHhhhcccccHHHHHHHHHHHHhhCCCchHHHHHHH
Q psy8182 207 CYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVRE 286 (827)
Q Consensus 207 ~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~~~~~~IiqlL~~~ehl~~~~Ae~v~~l~~~~~~~~l~~~ilre 286 (827)
...+|.++ +..+|......|+. .|. ..+...+++.|.. -.+.+-......-.+.+.+..+..+++-
T Consensus 24 L~~~L~~~------~~~vR~~A~~~L~~----~~~-~~~~~~L~~~l~~---~~~~vr~~a~~aL~~~~~~~~~~~L~~~ 89 (211)
T 3ltm_A 24 YIKNLQDD------SYYVRRAAAYALGK----IGD-ERAVEPLIKALKD---EDAWVRRAAADALGQIGDERAVEPLIKA 89 (211)
T ss_dssp HHHHTTCS------SHHHHHHHHHHHHH----HCC-GGGHHHHHHHTTC---SCHHHHHHHHHHHHHHCCGGGHHHHHHH
T ss_pred HHHHHcCC------CHHHHHHHHHHHHH----hCC-ccHHHHHHHHHcC---CCHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 44556655 46778777777753 232 1344456666653 2222222222223344556666666654
Q ss_pred HhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy8182 287 ISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQ 366 (827)
Q Consensus 287 I~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~ 366 (827)
+. | .|...-.....-|.++.. | ..+..|...|++++..+|.+.+.++|.+ ++
T Consensus 90 l~-----~--~~~~vr~~a~~aL~~~~~--~----~~~~~L~~~l~d~~~~vr~~a~~aL~~~------~~--------- 141 (211)
T 3ltm_A 90 LK-----D--EDGWVRQSAAVALGQIGD--E----RAVEPLIKALKDEDWFVRIAAAFALGEI------GD--------- 141 (211)
T ss_dssp TT-----C--SSHHHHHHHHHHHHHHCC--G----GGHHHHHHHTTCSSHHHHHHHHHHHHHH------CC---------
T ss_pred Hc-----C--CCHHHHHHHHHHHHHhCc--H----HHHHHHHHHHhCCCHHHHHHHHHHHHHc------CC---------
Confidence 31 1 233333334444444432 1 3467788889999999999999999986 11
Q ss_pred HHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 367 RDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 367 rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
...+..|.+.+.|.++.||..++..+.++-. ..+.......|.|.+..||+.|+..|..+=.+++
T Consensus 142 -~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~---------~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~~~~ 206 (211)
T 3ltm_A 142 -ERAVEPLIKALKDEDGWVRQSAADALGEIGG---------ERVRAAMEKLAETGTGFARKVAVNYLETHKSFNH 206 (211)
T ss_dssp -GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS---------HHHHHHHHHHHHHCCHHHHHHHHHHHHC------
T ss_pred -HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc---------hhHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCC
Confidence 1245666777789999999999999999854 3344455566789999999999999998655443
No 24
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.0093 Score=62.11 Aligned_cols=113 Identities=14% Similarity=0.138 Sum_probs=87.2
Q ss_pred HHHhhcCCCchHHHHHHHHHHH-HHHHHhhcCCCchHHHHHHHHHHHHHHHhh-cccchhHHHHHHHHHHHHHh-CC--C
Q psy8182 327 LLLNLEKESYLMRNCTLTIVTE-LLINVYKREDLSDEAKEQRDEYLNVLLDHM-HDVHTFVRTKVLQLFQRLVL-DK--A 401 (827)
Q Consensus 327 l~~~Ld~esy~lR~avle~~g~-ii~~~~~~~~~~~~~~~~rd~ll~~L~er~-~D~n~~vRskvLq~~~~L~~-~~--~ 401 (827)
+.+.+.+..+.-|.+.++.++. ++...-+-...+.+ -..+++.|...+ .|.|+.||..|++++..|++ .+ .
T Consensus 21 f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~----~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~ 96 (249)
T 2qk1_A 21 FQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQN----YSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPG 96 (249)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCC----CHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCccc----HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccccc
Confidence 3556788999999999999998 77531110000111 136788888888 89999999999999999998 22 3
Q ss_pred CChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh-CCCC
Q psy8182 402 IPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES-NPFA 443 (827)
Q Consensus 402 iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~-nPf~ 443 (827)
+...+...++...+.|+.||...||.+|...|.++.++ +|..
T Consensus 97 f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~ 139 (249)
T 2qk1_A 97 FSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLA 139 (249)
T ss_dssp SCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTC
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccc
Confidence 33256788999999999999999999999999999984 6643
No 25
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=96.57 E-value=0.2 Score=49.64 Aligned_cols=193 Identities=16% Similarity=0.190 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHhcccc-chhhhHHHHhhhccccc--HHHHHHHHHHHHhhCCCchHHHHHHHHhccccCCC-cCCchh
Q psy8182 226 VFIFQIVGYLIKRYNHGI-SCTVKIVQLLKNCEHLV--SPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNE-NAGQDS 301 (827)
Q Consensus 226 ~~if~il~~~vk~~~~~~-~~~~~IiqlL~~~ehl~--~~~Ae~v~~l~~~~~~~~l~~~ilreI~~~~~~d~-~~D~~g 301 (827)
.....+|.+.++.|-... ....+++-++..-|..+ .-+|..+..++.. .|.++..++ ..-|.+| ..|.+.
T Consensus 50 kNAl~vi~~i~~~~~el~epl~~kL~vm~~ksEaIpltqeIa~a~G~la~i--~Pe~v~~vV----p~lfanyrigd~ki 123 (253)
T 2db0_A 50 KNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKE--KPELVKSMI----PVLFANYRIGDEKT 123 (253)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHH--CHHHHHHHH----HHHHHHSCCCSHHH
T ss_pred HhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCchHHHHHHHHhHHHHh--CHHHHHhhH----HHHHHHHhcCCccc
Confidence 344556666666664433 34456777777777766 3566666666663 233333333 3333333 358888
Q ss_pred hhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccc
Q psy8182 302 SKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDV 381 (827)
Q Consensus 302 ~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~ 381 (827)
-=|++--|.+.+...|.++-.-.-.+...|.+..-.=|-+++.-+|- ..+++-+...-||..|..=.+|-
T Consensus 124 kIn~~yaLeeIaranP~l~~~v~rdi~smltskd~~Dkl~aLnFi~a----------lGen~~~yv~PfLprL~aLL~D~ 193 (253)
T 2db0_A 124 KINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLTALNFIEA----------MGENSFKYVNPFLPRIINLLHDG 193 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHT----------CCTTTHHHHGGGHHHHHGGGGCS
T ss_pred eecHHHHHHHHHHhChHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH----------HhccCccccCcchHHHHHHHcCc
Confidence 89999999999999999998777888888998887777777766652 23456677888999999999999
Q ss_pred chhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHh
Q psy8182 382 HTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIE 438 (827)
Q Consensus 382 n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~ 438 (827)
|--||+-|..++.+|.+.+ |. ..+++..-..+++|.|.+|-|.-..=|++++.
T Consensus 194 deiVRaSaVEtL~~lA~~n--pk--lRkii~~kl~e~~D~S~lv~~~V~egL~rl~l 246 (253)
T 2db0_A 194 DEIVRASAVEALVHLATLN--DK--LRKVVIKRLEELNDTSSLVNKTVKEGISRLLL 246 (253)
T ss_dssp SHHHHHHHHHHHHHHHTSC--HH--HHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHcC--HH--HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999975 44 56788888999999999999988877777654
No 26
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=96.42 E-value=0.11 Score=53.76 Aligned_cols=113 Identities=13% Similarity=0.040 Sum_probs=80.4
Q ss_pred hhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcc
Q psy8182 301 SSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHD 380 (827)
Q Consensus 301 g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D 380 (827)
.-.+...-|..+....|...-.-+..|...|++++..+|.+.+.++|++-. ...+..|.+.+.|
T Consensus 107 vr~~a~~aL~~l~~~~~~~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~----------------~~~~~~L~~~l~d 170 (280)
T 1oyz_A 107 VRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIND----------------KATIPLLINLLKD 170 (280)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-------------------CCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhccCCcccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC----------------HHHHHHHHHHHcC
Confidence 334445555555544333333345677888999999999999999996521 1245667777789
Q ss_pred cchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHH
Q psy8182 381 VHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTM 436 (827)
Q Consensus 381 ~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~l 436 (827)
-++.||..++..+..+... . ..++...+..|.|.+..||+.|+..|..+
T Consensus 171 ~~~~vr~~a~~aL~~~~~~---~----~~~~~~L~~~l~d~~~~vR~~A~~aL~~~ 219 (280)
T 1oyz_A 171 PNGDVRNWAAFAININKYD---N----SDIRDCFVEMLQDKNEEVRIEAIIGLSYR 219 (280)
T ss_dssp SSHHHHHHHHHHHHHHTCC---C----HHHHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhhccC---c----HHHHHHHHHHhcCCCHHHHHHHHHHHHHh
Confidence 9999999999999887422 1 24556667788999999999999999874
No 27
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.37 E-value=0.17 Score=50.70 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=104.1
Q ss_pred CCchhhhHHHHHHHHHHHHhHHHH---H--hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHH--HHHHHH
Q psy8182 297 AGQDSSKMIAAFLNEVAAHGAEYV---I--PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEA--KEQRDE 369 (827)
Q Consensus 297 ~D~~g~k~~s~FL~~Lae~~P~l~---l--~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~--~~~rd~ 369 (827)
.|.....+.+..|..|+...|... . .-+..|+++|.+++..+|...+.+++++... ++.. .-...+
T Consensus 98 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~-------~~~~~~~~~~~~ 170 (252)
T 4hxt_A 98 TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASG-------PDEAIKAIVDAG 170 (252)
T ss_dssp SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS-------CHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcC-------CHHHHHHHHHCc
Confidence 355666777888888886555432 2 2378899999999999999999999998642 1111 222356
Q ss_pred HHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCC
Q psy8182 370 YLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPF 442 (827)
Q Consensus 370 ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf 442 (827)
.+..|.+-+.+.++.+|..|+.++..|+..+ |... ..+++...+.-+.+.+..||+.|...|..+....|.
T Consensus 171 ~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~--~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 245 (252)
T 4hxt_A 171 GVEVLVKLLTSTDSEVQKEAARALANIASGP--TSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGWL 245 (252)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSB--HHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHTCBC
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC--HHHHHHHHHCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcCCCc
Confidence 8888888899999999999999999999732 2211 134677788889999999999999999999887664
No 28
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=96.35 E-value=0.11 Score=51.08 Aligned_cols=180 Identities=14% Similarity=0.139 Sum_probs=108.1
Q ss_pred HHHHHHHhccccccccccHHHHHHHHHHHHHHHHHhccccchhhhHHHHhhhcccccHHHH-HHHHHHHHhhCCCchHHH
Q psy8182 204 ANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLA-QAVVMFIRNHGCKSLVRE 282 (827)
Q Consensus 204 ~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~~~~~~IiqlL~~~ehl~~~~A-e~v~~l~~~~~~~~l~~~ 282 (827)
......+|+++ +..+|......|+. .|.. .....+++.|. +-.+.+- ..+..+ .+.+.+..+..
T Consensus 16 ~~~~i~~L~~~------~~~vr~~A~~~L~~----~~~~-~~~~~L~~~l~---~~~~~vr~~a~~~L-~~~~~~~~~~~ 80 (201)
T 3ltj_A 16 VEMYIKNLQDD------SYYVRRAAAYALGK----IGDE-RAVEPLIKALK---DEDAWVRRAAADAL-GQIGDERAVEP 80 (201)
T ss_dssp HHHHHHHTTCS------CHHHHHHHHHHHHH----HCCG-GGHHHHHHHTT---CSSHHHHHHHHHHH-HHHCCGGGHHH
T ss_pred hHHHHHHhcCC------CHHHHHHHHHHHHh----cCCh-hHHHHHHHHHc---CCCHHHHHHHHHHH-HhhCCHHHHHH
Confidence 34455677766 35778877777753 2321 33445666664 2222222 223333 33455556655
Q ss_pred HHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchH
Q psy8182 283 IVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDE 362 (827)
Q Consensus 283 ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~ 362 (827)
+++-+.. .|...-.....-|.++.. | ..+..|...|++++..+|.+.+.++|.+= .
T Consensus 81 L~~~l~d-------~~~~vr~~a~~aL~~~~~--~----~~~~~L~~~l~d~~~~vr~~a~~aL~~~~-----~------ 136 (201)
T 3ltj_A 81 LIKALKD-------EDGWVRQSAAVALGQIGD--E----RAVEPLIKALKDEDWFVRIAAAFALGEIG-----D------ 136 (201)
T ss_dssp HHHHTTC-------SSHHHHHHHHHHHHHHCC--G----GGHHHHHHHTTCSSHHHHHHHHHHHHHHT-----C------
T ss_pred HHHHHcC-------CCHHHHHHHHHHHHHhCc--H----HHHHHHHHHHcCCCHHHHHHHHHHHHHhC-----C------
Confidence 5554311 222222333333333322 1 24566778888888999999999998762 1
Q ss_pred HHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHH
Q psy8182 363 AKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTM 436 (827)
Q Consensus 363 ~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~l 436 (827)
...+..|.+.+.|-++.||..|+..+.++-. ..........|.|.+..||+.|+..|..+
T Consensus 137 -----~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~---------~~~~~~L~~~l~d~~~~vr~~A~~aL~~l 196 (201)
T 3ltj_A 137 -----ERAVEPLIKALKDEDGWVRQSAADALGEIGG---------ERVRAAMEKLAETGTGFARKVAVNYLETH 196 (201)
T ss_dssp -----GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS---------HHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_pred -----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc---------hhHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 2345667777788999999999999988843 23444445556888899999999888763
No 29
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=96.01 E-value=0.095 Score=57.46 Aligned_cols=175 Identities=11% Similarity=0.021 Sum_probs=126.1
Q ss_pred hhHHHHhhhccccc-------HHHHHHHHHHHHhhCCCchHH-HHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHH
Q psy8182 247 VKIVQLLKNCEHLV-------SPLAQAVVMFIRNHGCKSLVR-EIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAE 318 (827)
Q Consensus 247 ~~IiqlL~~~ehl~-------~~~Ae~v~~l~~~~~~~~l~~-~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~ 318 (827)
++++|-.+.|.--+ ..|..++.++....+.++.-- .+.=.+.. -++ ++|-.--|=+-.++..+++. |.
T Consensus 25 ~~v~qe~r~fn~~~~~~~kc~~~l~kll~l~~~G~~f~~~e~t~lf~~v~k-l~~--s~d~~lKrLvYLyl~~~~~~-~~ 100 (355)
T 3tjz_B 25 SAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTK-LFQ--SNDPTLRRMCYLTIKEMSCI-AE 100 (355)
T ss_dssp HHHHHHGGGTTSSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHG-GGG--CCCHHHHHHHHHHHHHHTTT-SS
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHH-Hhc--CCCHHHHHHHHHHHHHhCCC-HH
Confidence 44666555554432 345666666666545443221 22222222 333 47888888888999999988 56
Q ss_pred HHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHh
Q psy8182 319 YVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVL 398 (827)
Q Consensus 319 l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~ 398 (827)
.++=-.+.|.+-+.+.+..+|...+-++|+|.... .-+.+...+..=+.|.|||||++|+=+..+|+.
T Consensus 101 e~iLv~Nsl~kDl~~~N~~iR~lALRtL~~I~~~~------------m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~ 168 (355)
T 3tjz_B 101 DVIIVTSSLTKDMTGKEDSYRGPAVRALCQITDST------------MLQAIERYMKQAIVDKVPSVSSSALVSSLHLLK 168 (355)
T ss_dssp CGGGGHHHHHHHHHSSCHHHHHHHHHHHHHHCCTT------------THHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcCCCcHhHHHHHHHHHhcCCCHH------------HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhc
Confidence 66668889999999999999999999999986421 234566667778899999999999999999997
Q ss_pred CCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhC
Q psy8182 399 DKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESN 440 (827)
Q Consensus 399 ~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~n 440 (827)
.. |- ...+++...-+-|.|+++.|-=+|+.+|..+-.+.
T Consensus 169 ~~--pe-~v~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d 207 (355)
T 3tjz_B 169 CS--FD-VVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKND 207 (355)
T ss_dssp TC--HH-HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTC
T ss_pred cC--HH-HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhhc
Confidence 63 42 23457777778899999999999999999876544
No 30
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=95.89 E-value=0.22 Score=54.70 Aligned_cols=215 Identities=10% Similarity=0.068 Sum_probs=134.7
Q ss_pred HHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHhcc------ccchhhhHHHHhhhc--ccccHHHHHHHHHHHHhh
Q psy8182 203 VANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNH------GISCTVKIVQLLKNC--EHLVSPLAQAVVMFIRNH 274 (827)
Q Consensus 203 ~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~------~~~~~~~IiqlL~~~--ehl~~~~Ae~v~~l~~~~ 274 (827)
.......+|.++ +..+|......|+.+...... ..++-..++++|... ..+-...+..+..+....
T Consensus 108 ~i~~L~~lL~~~------~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~ 181 (450)
T 2jdq_A 108 AVPIFIELLSSE------FEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGK 181 (450)
T ss_dssp HHHHHHHHTTCS------CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCS
T ss_pred CHHHHHHHHcCC------CHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCC
Confidence 344455566554 356777777777766543110 012344566666531 122233334444444321
Q ss_pred CC-------CchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHH---HHH--hhHHHHHHhhcCCCchHHHHH
Q psy8182 275 GC-------KSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAE---YVI--PAMEELLLNLEKESYLMRNCT 342 (827)
Q Consensus 275 ~~-------~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~---l~l--~~is~l~~~Ld~esy~lR~av 342 (827)
+. ..++..+++-+. ..|.....+.+..|..|+...|. .+. .-+..|+.+|.+++..+|...
T Consensus 182 ~~~~~~~~~~~~l~~L~~~l~-------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a 254 (450)
T 2jdq_A 182 SPPPEFAKVSPCLNVLSWLLF-------VSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPA 254 (450)
T ss_dssp SSCCCGGGTGGGHHHHHHHTT-------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHc-------cCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHH
Confidence 11 233444443321 13555566777778888765433 221 347788899999999999999
Q ss_pred HHHHHHHHHHHhhcCCCchHHHH--HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHH----HHHHHHHHh
Q psy8182 343 LTIVTELLINVYKREDLSDEAKE--QRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFT----LKLLERAIG 416 (827)
Q Consensus 343 le~~g~ii~~~~~~~~~~~~~~~--~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~----~~v~~~av~ 416 (827)
+.++|++... ++...+ ...+.+..|.+-+.|.++.+|..|+.++..|+... |.... .+++...+.
T Consensus 255 ~~~L~~l~~~-------~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~--~~~~~~~~~~~~l~~L~~ 325 (450)
T 2jdq_A 255 LRAVGNIVTG-------DDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGN--RAQIQTVIDANIFPALIS 325 (450)
T ss_dssp HHHHHHHTTS-------CHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSC--HHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHhhC-------ChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC--HHHHHHHHHCCCHHHHHH
Confidence 9999998642 122111 12368888888888999999999999999999742 21111 256677788
Q ss_pred hcCCCChHHHHHHHHHHHHHHhh
Q psy8182 417 RLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 417 RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
.|.|....||++|+..|..+...
T Consensus 326 ~l~~~~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 326 ILQTAEFRTRKEAAWAITNATSG 348 (450)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHHHcC
Confidence 88899999999999999999876
No 31
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=95.77 E-value=2.7 Score=51.53 Aligned_cols=89 Identities=10% Similarity=0.091 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHhHHHHHhhHHHHHh-hhCC-----CChhHHhHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHH
Q psy8182 728 KMIAAFLNEVAAHGAEYVIPAMEELLL-NLEK-----ESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLD 801 (827)
Q Consensus 728 K~~s~FL~~Lae~~P~lvl~~~s~L~~-~Ld~-----Esy~lR~aVlev~g~ii~~~l~~~~~~e~~k~~rd~~ld~L~e 801 (827)
|..+.+|..++...|..+++.+...+. .|.+ .++.-|-|.+-++|-|..... +........++..| -
T Consensus 439 ~~~~~~l~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~------~~~~~~l~~l~~~l-~ 511 (971)
T 2x1g_F 439 QDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFG------GEEKRQIPRLMRVL-A 511 (971)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------------CHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcC------hhhhHHHHHHHHHH-H
Confidence 567789999999888666655543333 3433 688899999988888743222 12233455666644 3
Q ss_pred hcC--cCChhhhhHHHHHHHHhhc
Q psy8182 802 HMH--DVHTFVRTKVSTEKKLECW 823 (827)
Q Consensus 802 r~~--D~nayVRsKvlq~~~~lc~ 823 (827)
.+. |.+|.||..++.++.++|+
T Consensus 512 ~l~~~d~~~~vr~~a~~~l~~~~~ 535 (971)
T 2x1g_F 512 EIPYEKLNVKLLGTALETMGSYCN 535 (971)
T ss_dssp HSCTTTSCHHHHHHHHHHHHHTHH
T ss_pred hcCccccCHHHHHHHHHHHHHHHH
Confidence 344 7899999999999999886
No 32
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.57 E-value=0.17 Score=49.53 Aligned_cols=89 Identities=20% Similarity=0.250 Sum_probs=70.7
Q ss_pred hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCC
Q psy8182 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAI 402 (827)
Q Consensus 323 ~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~i 402 (827)
.+..|...|++++..+|.+.+.++|.+- . ...+..|.+.+.|-++.||..|+..+.++-...+
T Consensus 77 ~~~~L~~~l~d~~~~vr~~a~~aL~~~~-----~-----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~- 139 (201)
T 3ltj_A 77 AVEPLIKALKDEDGWVRQSAAVALGQIG-----D-----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGDERA- 139 (201)
T ss_dssp GHHHHHHHTTCSSHHHHHHHHHHHHHHC-----C-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTCGGG-
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhC-----c-----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCHHH-
Confidence 4667788899999999999999999751 1 1245566667789999999999999999865433
Q ss_pred ChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHH
Q psy8182 403 PVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTM 436 (827)
Q Consensus 403 P~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~l 436 (827)
+......|.|.+..||..|+.-|..+
T Consensus 140 --------~~~L~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 140 --------VEPLIKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp --------HHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 33445678899999999999999887
No 33
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.19 E-value=0.5 Score=46.48 Aligned_cols=89 Identities=20% Similarity=0.250 Sum_probs=69.0
Q ss_pred hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCC
Q psy8182 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAI 402 (827)
Q Consensus 323 ~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~i 402 (827)
.+..|...|++++..+|.+.+.++|.+= . ...+..|.+.+.|-++.||..++..+.++.+..+
T Consensus 82 ~~~~L~~~l~~~~~~vr~~a~~aL~~~~-----~-----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~- 144 (211)
T 3ltm_A 82 AVEPLIKALKDEDGWVRQSAAVALGQIG-----D-----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGDERA- 144 (211)
T ss_dssp GHHHHHHHTTCSSHHHHHHHHHHHHHHC-----C-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGG-
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhC-----c-----------HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHH-
Confidence 4567778888999999999999999761 1 1245666677789999999999999999865432
Q ss_pred ChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHH
Q psy8182 403 PVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTM 436 (827)
Q Consensus 403 P~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~l 436 (827)
+......|.|.+..||..|+.-|..+
T Consensus 145 --------~~~L~~~l~d~~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 145 --------VEPLIKALKDEDGWVRQSAADALGEI 170 (211)
T ss_dssp --------HHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 33345567899999999999999886
No 34
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=95.14 E-value=0.074 Score=52.69 Aligned_cols=110 Identities=17% Similarity=0.290 Sum_probs=91.0
Q ss_pred CCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHh
Q psy8182 275 GCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVY 354 (827)
Q Consensus 275 ~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~ 354 (827)
.+|.+...|.|||+.+-.. .|...-=..-.|+..+++..|+.+.|-+.-|..+|+...-.+|.+.||.++++-..
T Consensus 137 anP~l~~~v~rdi~smlts---kd~~Dkl~aLnFi~alGen~~~yv~PfLprL~aLL~D~deiVRaSaVEtL~~lA~~-- 211 (253)
T 2db0_A 137 ANPMLMASIVRDFMSMLSS---KNREDKLTALNFIEAMGENSFKYVNPFLPRIINLLHDGDEIVRASAVEALVHLATL-- 211 (253)
T ss_dssp HCHHHHHHHHHHHHHHTSC---SSHHHHHHHHHHHHTCCTTTHHHHGGGHHHHHGGGGCSSHHHHHHHHHHHHHHHTS--
T ss_pred hChHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHhccCccccCcchHHHHHHHcCcchhhhHHHHHHHHHHHHc--
Confidence 4588999999999888753 66555556668999999999999999999999999999999999999999998642
Q ss_pred hcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHh
Q psy8182 355 KREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVL 398 (827)
Q Consensus 355 ~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~ 398 (827)
+ .+- ....+.-.+++.|-+.-|--+|-..+.+|.-
T Consensus 212 -n-------pkl-Rkii~~kl~e~~D~S~lv~~~V~egL~rl~l 246 (253)
T 2db0_A 212 -N-------DKL-RKVVIKRLEELNDTSSLVNKTVKEGISRLLL 246 (253)
T ss_dssp -C-------HHH-HHHHHHHHHHCCCSCHHHHHHHHHHHHHHHH
T ss_pred -C-------HHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 1 123 3445555688999999999999999988864
No 35
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=95.09 E-value=0.16 Score=52.57 Aligned_cols=113 Identities=9% Similarity=0.041 Sum_probs=88.6
Q ss_pred HHHHHHhh-cCCCchHHHHHHHHHHHHHHHHhhcCCCchHHH-HHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCC-
Q psy8182 324 MEELLLNL-EKESYLMRNCTLTIVTELLINVYKREDLSDEAK-EQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDK- 400 (827)
Q Consensus 324 is~l~~~L-d~esy~lR~avle~~g~ii~~~~~~~~~~~~~~-~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~- 400 (827)
+..|.+.+ +..+..+|.+.+.++|.+.... .+.. .. .....++-.|.+|+-|..+-||.++-.++..+++.-
T Consensus 62 ~~~L~~~l~~D~n~~v~~~A~~al~~la~~l-~~~~----f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~ 136 (249)
T 2qk1_A 62 LGIYGHIIQKDANIQAVALAAQSVELICDKL-KTPG----FSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYD 136 (249)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH-CTTT----SCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHhc-cccc----ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcc
Confidence 44566667 6778889999999999988543 2121 23 566779999999999999999999999999999841
Q ss_pred -CCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 401 -AIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 401 -~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
..|......+++....-|..|+..||..|+.+|..++...|
T Consensus 137 ~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~ 178 (249)
T 2qk1_A 137 PLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEK 178 (249)
T ss_dssp TTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCC
T ss_pred ccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcC
Confidence 12222245677777888999999999999999999999876
No 36
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=95.01 E-value=0.038 Score=50.95 Aligned_cols=87 Identities=18% Similarity=0.242 Sum_probs=66.3
Q ss_pred HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCC
Q psy8182 324 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIP 403 (827)
Q Consensus 324 is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP 403 (827)
+..|...|++++..+|...+.++|++= + ...+..|.+-+.|.++.||..|+..+.++.+.
T Consensus 44 ~~~L~~~L~d~~~~vR~~A~~aL~~~~-----~-----------~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~~---- 103 (131)
T 1te4_A 44 FEPLLESLSNEDWRIRGAAAWIIGNFQ-----D-----------ERAVEPLIKLLEDDSGFVRSGAARSLEQIGGE---- 103 (131)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHGGGC-----S-----------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCSH----
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcC-----C-----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcH----
Confidence 466778889999999999999999752 1 12345555555699999999999999988643
Q ss_pred hHHHHHHHHHHHhhcCCCChHHHHHHHHHHHH
Q psy8182 404 VAFTLKLLERAIGRLMDKSSNVVKYTVQLLKT 435 (827)
Q Consensus 404 ~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ 435 (827)
..+......|.|.+..||..|+.-|..
T Consensus 104 -----~a~~~L~~~l~d~~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 104 -----RVRAAMEKLAETGTGFARKVAVNYLET 130 (131)
T ss_dssp -----HHHHHHHHHTTSCCTHHHHHHHHHGGG
T ss_pred -----HHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 234445566789999999999987754
No 37
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.78 E-value=0.81 Score=50.13 Aligned_cols=136 Identities=8% Similarity=0.080 Sum_probs=99.2
Q ss_pred CchhhhHHHHHHHHHHHHhHHH---HH--hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHH-HHH-HHHH
Q psy8182 298 GQDSSKMIAAFLNEVAAHGAEY---VI--PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEA-KEQ-RDEY 370 (827)
Q Consensus 298 D~~g~k~~s~FL~~Lae~~P~l---~l--~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~-~~~-rd~l 370 (827)
|.........-|..++...|.. ++ .-+..|.++|.+++..+|.+.+.++|++... ++.. +.- ..++
T Consensus 247 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~-------~~~~~~~~~~~~~ 319 (450)
T 2jdq_A 247 DYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAG-------NRAQIQTVIDANI 319 (450)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTS-------CHHHHHHHHHTTH
T ss_pred chhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcC-------CHHHHHHHHHCCC
Confidence 4444556666677777655542 22 3467888999999999999999999998641 1111 111 2467
Q ss_pred HHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 371 LNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 371 l~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
+..|.+.+.|.++.||..|..++..|+..+. |... ..+++...+.-|.|+...||++|+..|..++...|
T Consensus 320 l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~-~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~ 393 (450)
T 2jdq_A 320 FPALISILQTAEFRTRKEAAWAITNATSGGS-AEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGE 393 (450)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHTCHHHHHHGGGSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHcCCC-HHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHhch
Confidence 7888888889999999999999999997532 2111 13467777888999999999999999999987655
No 38
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=94.73 E-value=1.3 Score=44.16 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=85.5
Q ss_pred HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHH-HHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCC
Q psy8182 324 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAK-EQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAI 402 (827)
Q Consensus 324 is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~-~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~i 402 (827)
+..|+.+|.+++..+|...+.+++++... .++... -...+.+..|.+-+.|.++.+|..++.++..|+...
T Consensus 88 i~~l~~ll~~~~~~v~~~a~~~L~~l~~~------~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~-- 159 (252)
T 4hxt_A 88 VEVLVKLLTSTDSEVQKEAARALANIASG------PDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGP-- 159 (252)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTTS------CHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC--
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHcC------CHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC--
Confidence 77788999999999999999999998631 011111 123467888888889999999999999999999853
Q ss_pred ChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 403 PVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 403 P~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
|... ..+++...+.-|.+.+..||+.|+..|..+...+|
T Consensus 160 ~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 202 (252)
T 4hxt_A 160 DEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPT 202 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBH
T ss_pred HHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCH
Confidence 2111 13477888888999999999999999999886544
No 39
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=94.65 E-value=2.6 Score=43.36 Aligned_cols=186 Identities=15% Similarity=0.118 Sum_probs=140.0
Q ss_pred HHHHHHhHHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHH
Q psy8182 310 NEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKV 389 (827)
Q Consensus 310 ~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskv 389 (827)
+++++..+..+ ..|..+|+.+.-+++-.++.++++++... .+.-.....+.+||.+.+=..+.|==|=-+|
T Consensus 25 ~ela~~~e~~l----~~L~~LL~dkD~~vk~raL~~LeellK~~-----~~~l~~~~~e~~Ld~iI~llk~~dEkval~A 95 (265)
T 3b2a_A 25 VSLALEDKRAL----FLILELAGEDDETTRLRAFVALGEILKRA-----DSDLRMMVLERHLDVFINALSQENEKVTIKA 95 (265)
T ss_dssp HHHHHHCHHHH----HHHHHHTTSSCHHHHHHHHHHHHHHHHHS-----CHHHHHHHHHHHHHHHHHTCCSTTHHHHHHH
T ss_pred HHHHHhchhHH----HHHHHHHhccchHHHHHHHHHHHHHHHhc-----cccccHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 56777777744 48889999999999999999999999752 0112235668899999988889999999999
Q ss_pred HHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCCCCCCChhHHHHhhhhhhhhhhhHhhhh
Q psy8182 390 LQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERIKDCF 469 (827)
Q Consensus 390 Lq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf~~~L~~~~~v~ev~~l~ei~~~L~e~~ 469 (827)
+.++..|.+..-++.+-+.+++..-.+=+.++....|=.|.-.+.++ .|-..-=..-.|.-+..+.++..-+--.+.
T Consensus 96 ~r~L~~LLe~vpL~~~~y~Kl~~aL~dlik~~~~il~~eaae~Lgkl---kv~~~~~~V~~~l~sLl~Skd~~vK~agl~ 172 (265)
T 3b2a_A 96 LRALGYLVKDVPMGSKTFLKAAKTLVSLLESPDDMMRIETIDVLSKL---QPLEDSKLVRTYINELVVSPDLYTKVAGFC 172 (265)
T ss_dssp HHHHHHHHTTCCBCHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHC---CBSCCCHHHHHHHHHHHTCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHhcCCCchHHHHHHHHhCcC---CcccchHHHHHHHHHHHhCCChhHHHHHHH
Confidence 99999999998888888999999999999999999999999999998 442222222334555555555544443333
Q ss_pred hh----cCCCCchhhhhhhhhHHHhhhccccccHHHHHHHHHHHHH
Q psy8182 470 EA----LDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTKLLL 511 (827)
Q Consensus 470 ~A----l~~e~~~~i~e~FD~lySll~~~~~l~~~~~~~l~~~~l~ 511 (827)
.. -..+++.....+|+-+-+++.+- ++-.+.+.+ +++.
T Consensus 173 ~L~eia~~S~D~~i~~~I~~eI~elL~~e---D~~l~e~aL-d~Le 214 (265)
T 3b2a_A 173 LFLNMLNSSADSGHLTLILDEIPSLLQND---NEFIVELAL-DVLE 214 (265)
T ss_dssp HHHHHGGGCSSCCCGGGTTTTHHHHHTCS---CHHHHHHHH-HHHH
T ss_pred HHHHhhcccCCHHHHHHHHHHHHHHHcCC---CHHHHHHHH-HHHH
Confidence 11 12566666678888888888654 788888888 7764
No 40
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=94.50 E-value=0.17 Score=53.16 Aligned_cols=122 Identities=19% Similarity=0.209 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHHHhHHHHHhhHHH----HHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhh
Q psy8182 303 KMIAAFLNEVAAHGAEYVIPAMEE----LLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHM 378 (827)
Q Consensus 303 k~~s~FL~~Lae~~P~l~l~~is~----l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~ 378 (827)
.-+..++..|++.-++..-...+. |+.-++...-.+|.++-+++.. +..++.- ..+++.|.+-+
T Consensus 109 ~~L~~l~~~l~~~~y~~~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~-l~~v~~~-----------~~v~~~l~~g~ 176 (266)
T 2of3_A 109 ELCKVIVELIRDTETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNV-LSDVVGP-----------LKMTPMLLDAL 176 (266)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHH-HHHHHCH-----------HHHHHHHHHGG
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH-HHHHCCH-----------HHHHHHHHHHH
Confidence 344444444455433332222333 3444566668899999999854 4445432 67888999999
Q ss_pred cccchhHHHHHHHHHHHHHhCCCCChHHHHHHH---HHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 379 HDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLL---ERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 379 ~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~---~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
-..|+-+|.-.|+.+..+.+...++. .+.+ ...+.-|.|+.+.||.+|++.+..+-..
T Consensus 177 ksKN~R~R~e~l~~l~~li~~~G~~~---~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~ 237 (266)
T 2of3_A 177 KSKNARQRSECLLVIEYYITNAGISP---LKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKF 237 (266)
T ss_dssp GCSCHHHHHHHHHHHHHHHHHHCSGG---GGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCCc---cccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999766652 2345 7888999999999999999999876544
No 41
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.28 E-value=0.24 Score=49.97 Aligned_cols=110 Identities=10% Similarity=0.089 Sum_probs=85.4
Q ss_pred hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHH--HHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCC
Q psy8182 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEA--KEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDK 400 (827)
Q Consensus 323 ~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~--~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~ 400 (827)
-+..|+.+|.+++..+|...+.+++++... ++.. .-...+.+..|.+-+.|.++-||..|+.++..|+...
T Consensus 97 ~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~-------~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~ 169 (252)
T 4db8_A 97 ALPALVQLLSSPNEQILQEALWALSNIASG-------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG 169 (252)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTTS-------CHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHhhcC-------CchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 367888999999999999999999998421 1222 1233467888888889999999999999999999853
Q ss_pred CCChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 401 AIPVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 401 ~iP~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
|... ..+++...+.-|.+.+..||++|+..|..+...+|
T Consensus 170 --~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 212 (252)
T 4db8_A 170 --NEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 212 (252)
T ss_dssp --HHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCH
T ss_pred --hHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCH
Confidence 2111 13456777888999999999999999999886554
No 42
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=94.01 E-value=0.31 Score=47.73 Aligned_cols=135 Identities=13% Similarity=0.122 Sum_probs=95.4
Q ss_pred CchhhhHHHHHHHHHHHHhHHH---HH--hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHH--HHHHHH
Q psy8182 298 GQDSSKMIAAFLNEVAAHGAEY---VI--PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAK--EQRDEY 370 (827)
Q Consensus 298 D~~g~k~~s~FL~~Lae~~P~l---~l--~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~--~~rd~l 370 (827)
|..--...+..|..++...|.. +. .-+..|+.+|.+++..+|...+.++|++... +++.+ -...+.
T Consensus 25 ~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~-------~~~~~~~i~~~g~ 97 (210)
T 4db6_A 25 DQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG-------GNEQIQAVIDAGA 97 (210)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS-------CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcC-------CcHHHHHHHHCCC
Confidence 3333444455555555433322 11 2467888999999999999999999998631 12211 122456
Q ss_pred HHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 371 LNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 371 l~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
+..|.+-+.+-++-+|..|+.++..|+... |... ..+++...+.-|.+.+..||++|+..|..+...+|
T Consensus 98 i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~--~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~ 170 (210)
T 4db6_A 98 LPALVQLLSSPNEQILQEALWALSNIASGG--NEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 170 (210)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTTSC--HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHcCC--HHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCc
Confidence 788888888899999999999999999743 2111 23567778888999999999999999999987655
No 43
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=93.87 E-value=1 Score=49.27 Aligned_cols=138 Identities=10% Similarity=0.054 Sum_probs=89.0
Q ss_pred HHHHHhccccCCCcCCchhhhHHHHHHHHHH------HHhHHHH-HhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhh
Q psy8182 283 IVREISAMEDGNENAGQDSSKMIAAFLNEVA------AHGAEYV-IPAMEELLLNLEKESYLMRNCTLTIVTELLINVYK 355 (827)
Q Consensus 283 ilreI~~~~~~d~~~D~~g~k~~s~FL~~La------e~~P~l~-l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~ 355 (827)
++.| + +.|++. +..+|-+...+.++- +..|..- ..-.-.+++.+.++.+.+|.-+--.+.++-.
T Consensus 27 v~qe-~-r~fn~~---~~~~~kc~~~l~kll~l~~~G~~f~~~e~t~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~---- 97 (355)
T 3tjz_B 27 VLQE-A-RVFNET---PINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSC---- 97 (355)
T ss_dssp HHHH-G-GGTTSS---SCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHGGGGCCCHHHHHHHHHHHHHHTT----
T ss_pred HHHH-H-HHhcCC---CCcHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC----
Confidence 7888 3 488753 234444444444432 3333221 1122345678899999999987766654322
Q ss_pred cCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHH
Q psy8182 356 REDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKT 435 (827)
Q Consensus 356 ~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ 435 (827)
.. ++ .--. .+.|..=+.|-|+|+|+-||.++.+|.+... ...+......-|.||++.|||+|+--..+
T Consensus 98 -~~-~e-~iLv----~Nsl~kDl~~~N~~iR~lALRtL~~I~~~~m-----~~~l~~~lk~~L~d~~pyVRk~A~l~~~k 165 (355)
T 3tjz_B 98 -IA-ED-VIIV----TSSLTKDMTGKEDSYRGPAVRALCQITDSTM-----LQAIERYMKQAIVDKVPSVSSSALVSSLH 165 (355)
T ss_dssp -TS-SC-GGGG----HHHHHHHHHSSCHHHHHHHHHHHHHHCCTTT-----HHHHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred -CH-HH-HHHH----HHHHHhhcCCCcHhHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 11 11 1111 2233334578999999999999999988753 44677777888999999999999988888
Q ss_pred HHhhCC
Q psy8182 436 MIESNP 441 (827)
Q Consensus 436 ll~~nP 441 (827)
++..+|
T Consensus 166 L~~~~p 171 (355)
T 3tjz_B 166 LLKCSF 171 (355)
T ss_dssp HTTTCH
T ss_pred HhccCH
Confidence 777666
No 44
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.78 E-value=11 Score=42.49 Aligned_cols=114 Identities=9% Similarity=0.069 Sum_probs=82.3
Q ss_pred hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHHHHHhCC
Q psy8182 322 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDV-HTFVRTKVLQLFQRLVLDK 400 (827)
Q Consensus 322 ~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~-n~~vRskvLq~~~~L~~~~ 400 (827)
..+..|+..|.+++...|...+.++++++.. +....-..-...+.+..|.+-+.+. ++-+|..|+.++..|+...
T Consensus 87 ~~i~~lv~~L~s~~~~~~~~A~~~L~~ll~~----~~~~~~~~~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~ 162 (530)
T 1wa5_B 87 QELPQMTQQLNSDDMQEQLSATVKFRQILSR----EHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGT 162 (530)
T ss_dssp CCHHHHHHHHSCSSHHHHHHHHHHHHHHTCC----SSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhCC----CCCccHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCC
Confidence 4467777888888888998888888877642 1111111223457788888888886 8999999999999999853
Q ss_pred CCChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 401 AIPVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 401 ~iP~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
|..+ ..+++...+.-|.+.+..||.+|+..|..+...+|
T Consensus 163 --~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~ 205 (530)
T 1wa5_B 163 --SAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDST 205 (530)
T ss_dssp --HHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCH
T ss_pred --HHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCc
Confidence 1111 12345666677778899999999999999887654
No 45
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=93.47 E-value=1 Score=46.36 Aligned_cols=88 Identities=15% Similarity=0.068 Sum_probs=65.6
Q ss_pred hhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHH
Q psy8182 330 NLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLK 409 (827)
Q Consensus 330 ~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~ 409 (827)
.+++++..+|.+.+.++|++-...- .....++..|.+.+.|-++.||..|+..+.++....++|
T Consensus 99 ~~~d~~~~vr~~a~~aL~~l~~~~~----------~~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~~~~~~------ 162 (280)
T 1oyz_A 99 ALNDKSACVRATAIESTAQRCKKNP----------IYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIP------ 162 (280)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHHHCG----------GGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC---CCHH------
T ss_pred HhcCCCHHHHHHHHHHHHHHhccCC----------cccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCCHHHHH------
Confidence 4677889999999999998753210 012356788888889999999999999998887654433
Q ss_pred HHHHHHhhcCCCChHHHHHHHHHHHHH
Q psy8182 410 LLERAIGRLMDKSSNVVKYTVQLLKTM 436 (827)
Q Consensus 410 v~~~av~RL~DKSs~VRk~Ai~Ll~~l 436 (827)
..+..|.|.+..||..|+.-|..+
T Consensus 163 ---~L~~~l~d~~~~vr~~a~~aL~~~ 186 (280)
T 1oyz_A 163 ---LLINLLKDPNGDVRNWAAFAININ 186 (280)
T ss_dssp ---HHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred ---HHHHHHcCCCHHHHHHHHHHHHhh
Confidence 344567899999999999999775
No 46
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=93.44 E-value=0.51 Score=46.15 Aligned_cols=105 Identities=11% Similarity=0.071 Sum_probs=82.3
Q ss_pred hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHH--HHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCC
Q psy8182 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAK--EQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDK 400 (827)
Q Consensus 323 ~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~--~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~ 400 (827)
-+..|+.+|++++..+|...+.+++++... +++.. -...+.+..|.+-+.+.++-+|..++.++..|+..+
T Consensus 97 ~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~-------~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~ 169 (210)
T 4db6_A 97 ALPALVQLLSSPNEQILQEALWALSNIASG-------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG 169 (210)
T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHTTS-------CHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHcCCcHHHHHHHHHHHHHHHcC-------CHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence 467889999999999999999999998641 12221 123567888888888899999999999999999863
Q ss_pred CCChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHH
Q psy8182 401 AIPVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTM 436 (827)
Q Consensus 401 ~iP~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~l 436 (827)
|..+ ..+++...+.-|.+.+..||++|...|..+
T Consensus 170 --~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l 207 (210)
T 4db6_A 170 --NEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKL 207 (210)
T ss_dssp --HHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred --cHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 2221 125677778889999999999999999876
No 47
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=93.40 E-value=0.79 Score=46.11 Aligned_cols=112 Identities=10% Similarity=0.093 Sum_probs=86.0
Q ss_pred hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHH--HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCC
Q psy8182 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKE--QRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDK 400 (827)
Q Consensus 323 ~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~--~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~ 400 (827)
-+..|+.+|.+++..+|...+.+++++... +++.+. ...+.+..|.+-+.+-++.+|..++.++..|+...
T Consensus 55 ~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~-------~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~ 127 (252)
T 4db8_A 55 ALPALVQLLSSPNEQILQEALWALSNIASG-------GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG 127 (252)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTTS-------CHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhcC-------CHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCC
Confidence 467889999999999999999999988631 122121 23457888888888999999999999999999863
Q ss_pred CCC--hHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 401 AIP--VAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 401 ~iP--~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
..- .-...+++...+.-|.|.+..||++|+..|..+...+|
T Consensus 128 ~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~ 170 (252)
T 4db8_A 128 NEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 170 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH
T ss_pred chHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCh
Confidence 211 11123577788888999999999999999999876553
No 48
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=93.37 E-value=13 Score=41.86 Aligned_cols=116 Identities=9% Similarity=0.037 Sum_probs=83.2
Q ss_pred hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHhCC
Q psy8182 322 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVH-TFVRTKVLQLFQRLVLDK 400 (827)
Q Consensus 322 ~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n-~~vRskvLq~~~~L~~~~ 400 (827)
..+..|+..|.++...+|...+.++++++.. +.......-...+.+..|.+-+.+.+ +.+|..|+.++..|+..+
T Consensus 74 ~~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~----~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~ 149 (528)
T 4b8j_A 74 ESLPAMIGGVYSDDNNLQLEATTQFRKLLSI----ERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGT 149 (528)
T ss_dssp -CHHHHHHHHTSSCHHHHHHHHHHHHHHHTC----SSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhcC----CCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCC
Confidence 4577788888888899999999999887642 21111122234566777777777766 999999999999999853
Q ss_pred CCChHH--HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 401 AIPVAF--TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 401 ~iP~~~--~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
.-.... ..+++...+.-|.+.+..||.+|+..|..+...+|
T Consensus 150 ~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~ 192 (528)
T 4b8j_A 150 SENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSP 192 (528)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCh
Confidence 111111 12467777888999999999999999999886655
No 49
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=93.28 E-value=0.15 Score=59.94 Aligned_cols=119 Identities=10% Similarity=0.070 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHhcccCCCccCCCcchhHHHHHHHHHHHHhHHHHHhhHHHHHhhhCCCChhHHhH
Q psy8182 687 PLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNC 766 (827)
Q Consensus 687 ~~Ae~v~~l~~~~~~~~l~~eilreI~~~~~~d~~~Ds~g~K~~s~FL~~Lae~~P~lvl~~~s~L~~~Ld~Esy~lR~a 766 (827)
.+..++.++...||...+.-++++=++ ++|-.-=|-.-.++..+++..|.+++--++.+.+-|.+.+...|+.
T Consensus 58 ~l~Kli~l~~~G~d~s~~~~~vvkl~~-------s~~~~~Krl~YL~l~~~~~~~~e~~~L~iN~l~kDl~~~n~~ir~l 130 (621)
T 2vgl_A 58 YVCKLLFIFLLGHDIDFGHMEAVNLLS-------SNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGL 130 (621)
T ss_dssp HHHHHHHHHHHSCCCCSCHHHHHHGGG-------CSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred HHHHHHHHHHcCCCCchhHHHHHHHhc-------CCCHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 456666666666777777778887554 2444556777888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHhc--CcCChhhhhHHHHHHHHhhcC
Q psy8182 767 TLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHM--HDVHTFVRTKVSTEKKLECWQ 824 (827)
Q Consensus 767 Vlev~g~ii~~~l~~~~~~e~~k~~rd~~ld~L~er~--~D~nayVRsKvlq~~~~lc~~ 824 (827)
-+.++|+|... +.-+.+...+..-+ -|.|||||.+|.-++.+++..
T Consensus 131 ALr~L~~i~~~------------e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~ 178 (621)
T 2vgl_A 131 ALHCIANVGSR------------EMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRT 178 (621)
T ss_dssp HHHHHHHHCCH------------HHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccCCH------------HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999998531 23346666677777 899999999999999998864
No 50
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.23 E-value=3.2 Score=47.04 Aligned_cols=220 Identities=10% Similarity=0.006 Sum_probs=133.3
Q ss_pred HHHHHHHHhccccccccccHHHHHHHHHHHHHHHHHh---ccc---cchhhhHHHHhhhccc-ccHHHHHHHHHHHHhhC
Q psy8182 203 VANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRY---NHG---ISCTVKIVQLLKNCEH-LVSPLAQAVVMFIRNHG 275 (827)
Q Consensus 203 ~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~---~~~---~~~~~~IiqlL~~~eh-l~~~~Ae~v~~l~~~~~ 275 (827)
+......+|.++ .+..++.....+|+.+.... ... .++-..++++|...+. +-...+..+..+....+
T Consensus 131 ~i~~Lv~~L~~~-----~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~ 205 (530)
T 1wa5_B 131 VVPRLVEFMREN-----QPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDST 205 (530)
T ss_dssp CHHHHHHTTSTT-----SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHhCCC-----CCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCc
Confidence 344555666655 24567777777776655421 000 2344566677764211 11222233333332100
Q ss_pred -------CCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHh-H---H-HHHhhHHHHHHhhcCCCchHHHHHH
Q psy8182 276 -------CKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHG-A---E-YVIPAMEELLLNLEKESYLMRNCTL 343 (827)
Q Consensus 276 -------~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~-P---~-l~l~~is~l~~~Ld~esy~lR~avl 343 (827)
...++..+++-+.. .+....++....|..|+... | . .+-.-+..|+.+|.++...+|...+
T Consensus 206 ~~~~~~~~~~~l~~L~~ll~~-------~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~ 278 (530)
T 1wa5_B 206 DYRDYVLQCNAMEPILGLFNS-------NKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDAC 278 (530)
T ss_dssp HHHHHHHHTTCHHHHHHGGGS-------CCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHH
T ss_pred cchHHHHHcCcHHHHHHHhcc-------CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHH
Confidence 01223333332211 35556677778888888543 2 2 2234577888899988899999999
Q ss_pred HHHHHHHHHHhhcCCCchHHHHHH-HHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChH--HHHHHHHHHHhhcCC
Q psy8182 344 TIVTELLINVYKREDLSDEAKEQR-DEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVA--FTLKLLERAIGRLMD 420 (827)
Q Consensus 344 e~~g~ii~~~~~~~~~~~~~~~~r-d~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~--~~~~v~~~av~RL~D 420 (827)
.+++++... .++...... .+++..|.+-+.|.++-||..++.++..|+....--.. ...+++...+.-|.+
T Consensus 279 ~~L~~L~~~------~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~ 352 (530)
T 1wa5_B 279 WAISYLSDG------PQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSS 352 (530)
T ss_dssp HHHHHHHSS------CHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC
T ss_pred HHHHHHhCC------CHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcC
Confidence 999988632 111112222 36788888888999999999999999999975311000 112567778888999
Q ss_pred CChHHHHHHHHHHHHHHhhC
Q psy8182 421 KSSNVVKYTVQLLKTMIESN 440 (827)
Q Consensus 421 KSs~VRk~Ai~Ll~~ll~~n 440 (827)
....||+.|+..|+.+...+
T Consensus 353 ~~~~vr~~A~~aL~~l~~~~ 372 (530)
T 1wa5_B 353 PKENIKKEACWTISNITAGN 372 (530)
T ss_dssp SCHHHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHHHcCC
Confidence 99999999999999977644
No 51
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=93.20 E-value=3.4 Score=43.01 Aligned_cols=128 Identities=13% Similarity=0.200 Sum_probs=93.6
Q ss_pred CCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhh
Q psy8182 276 CKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYK 355 (827)
Q Consensus 276 ~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~ 355 (827)
.+.+..+++++|-..... .+..--|-++.|+.+....-|.+..+.+..|..+|.+++..+-+.++.+++.+...++.
T Consensus 47 dp~ll~~~l~~il~~~~~---~~~~vrk~~~~Fi~e~~~~k~~l~~~~l~~L~~Ll~d~d~~V~K~~I~~~~~iY~~~l~ 123 (257)
T 3gs3_A 47 CAELAEEFLESVLSLAHD---SNMEVRKQVVAFVEQVCKVKVELLPHVINVVSMLLRDNSAQVIKRVIQACGSIYKNGLQ 123 (257)
T ss_dssp TGGGHHHHHHHHHGGGGC---SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHhccC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 577999999999886532 56666799999999999999999999999999999999988888899999988876543
Q ss_pred cCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHH
Q psy8182 356 REDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKT 435 (827)
Q Consensus 356 ~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ 435 (827)
++. .++++--.+=++|..++..+ ..+ .+.+...+.-||=.|++|+..
T Consensus 124 ---------------------~i~-~~~~~~~~~~~~W~~m~~lK-------~~I----l~~~~s~n~gvkl~~iKF~e~ 170 (257)
T 3gs3_A 124 ---------------------YLC-SLMEPGDSAEQAWNILSLIK-------AQI----LDMIDNENDGIRTNAIKFLEG 170 (257)
T ss_dssp ---------------------HHT-TSSSCCHHHHHHHHHHHHHH-------HHH----HHGGGSSCHHHHHHHHHHHHH
T ss_pred ---------------------HHh-cCCCCcchHHHHHHHHHHHH-------HHH----HHHHccCCcchHHHHHHHHHH
Confidence 111 13332223456666665541 112 222345678888888888888
Q ss_pred HHhh
Q psy8182 436 MIES 439 (827)
Q Consensus 436 ll~~ 439 (827)
++..
T Consensus 171 vIl~ 174 (257)
T 3gs3_A 171 VVVL 174 (257)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7753
No 52
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=92.68 E-value=2.6 Score=47.68 Aligned_cols=135 Identities=17% Similarity=0.134 Sum_probs=101.1
Q ss_pred CchhhhHHHHHHHHHHHHhHH---HHHh--hHHHHHHhh-cCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHH
Q psy8182 298 GQDSSKMIAAFLNEVAAHGAE---YVIP--AMEELLLNL-EKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYL 371 (827)
Q Consensus 298 D~~g~k~~s~FL~~Lae~~P~---l~l~--~is~l~~~L-d~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll 371 (827)
+..--......|..++...|. .+.. -+..|+.+| ++.+..+|..++.+++++.... +. .........+
T Consensus 173 ~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~---~~---~~~~~~~~~l 246 (528)
T 4b8j_A 173 SDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGK---PQ---PSFEQTRPAL 246 (528)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSS---SC---CCHHHHTTHH
T ss_pred CHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCC---CC---CcHHHHHHHH
Confidence 445556677788888876553 3333 478888998 7788899999999999887431 11 1123346788
Q ss_pred HHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHH-----HHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 372 NVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFT-----LKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 372 ~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~-----~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
..|..-+.+.++-+|..++.++..|+.. +.... .+++...+.-|.+.+..||..|+..|..+...+|
T Consensus 247 ~~L~~lL~~~~~~v~~~a~~aL~~l~~~---~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~ 318 (528)
T 4b8j_A 247 PALARLIHSNDEEVLTDACWALSYLSDG---TNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDD 318 (528)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHTSS---CHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHcC---CHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCH
Confidence 8888888999999999999999999975 22222 2456778888999999999999999999876543
No 53
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=91.99 E-value=0.036 Score=51.14 Aligned_cols=88 Identities=15% Similarity=0.164 Sum_probs=62.5
Q ss_pred hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCC
Q psy8182 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAI 402 (827)
Q Consensus 323 ~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~i 402 (827)
.+..+...|++++..+|.+.+.++|++ ++. . +..|.+.+.|-++.||..|+..+.++.+.
T Consensus 13 ~~~~l~~~L~~~~~~vR~~A~~~L~~~------~~~----------~-~~~L~~~L~d~~~~vR~~A~~aL~~~~~~--- 72 (131)
T 1te4_A 13 GLVPRGSHMADENKWVRRDVSTALSRM------GDE----------A-FEPLLESLSNEDWRIRGAAAWIIGNFQDE--- 72 (131)
T ss_dssp --------CCSSCCCSSSSCCSSTTSC------SST----------T-HHHHHHGGGCSCHHHHHHHHHHHGGGCSH---
T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHh------Cch----------H-HHHHHHHHcCCCHHHHHHHHHHHHhcCCH---
Confidence 456788889999999999999888854 111 1 36677778899999999999998887653
Q ss_pred ChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHH
Q psy8182 403 PVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTM 436 (827)
Q Consensus 403 P~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~l 436 (827)
..+...+..|.|++..||..|+.-|..+
T Consensus 73 ------~a~~~L~~~L~d~~~~VR~~A~~aL~~~ 100 (131)
T 1te4_A 73 ------RAVEPLIKLLEDDSGFVRSGAARSLEQI 100 (131)
T ss_dssp ------HHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 2344445566799999999999999875
No 54
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=91.49 E-value=1.6 Score=45.28 Aligned_cols=99 Identities=10% Similarity=0.050 Sum_probs=75.1
Q ss_pred HhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhC---CCCChH
Q psy8182 329 LNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLD---KAIPVA 405 (827)
Q Consensus 329 ~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~---~~iP~~ 405 (827)
+.|.+..-.+|...++++-.++.... ..+.+++.+..=+-..||-+|.-+++.+.++++. +.+|..
T Consensus 110 K~l~~~k~~~~~~a~~~l~~~~~~~~-----------~~~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~~~~~~k 178 (278)
T 4ffb_C 110 KGLTSSRATTKTQSMSCILSLCGLDT-----------SITQSVELVIPFFEKKLPKLIAAAANCVYELMAAFGLTNVNVQ 178 (278)
T ss_dssp HTSSCCCHHHHHHHHHHHHHHHHTSS-----------SSHHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTTTTCCHH
T ss_pred HHhcCccHHHHHHHHHHHHHHHHhcC-----------cHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCCcCCch
Confidence 34666667778777777766664221 1145677777888889999999999999999885 445544
Q ss_pred H-HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHh
Q psy8182 406 F-TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIE 438 (827)
Q Consensus 406 ~-~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~ 438 (827)
. ...++..+..-|+|....||.+|++++..+..
T Consensus 179 ~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~ 212 (278)
T 4ffb_C 179 TFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYK 212 (278)
T ss_dssp HHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 3 35577788888999999999999999998754
No 55
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=91.48 E-value=29 Score=42.86 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHHHhHHHHHh----hHHHHHH-hhc---CCCchHHHHHHHHHHHHHHHHhhcC----CCchHHHHHHHHH
Q psy8182 303 KMIAAFLNEVAAHGAEYVIP----AMEELLL-NLE---KESYLMRNCTLTIVTELLINVYKRE----DLSDEAKEQRDEY 370 (827)
Q Consensus 303 k~~s~FL~~Lae~~P~l~l~----~is~l~~-~Ld---~esy~lR~avle~~g~ii~~~~~~~----~~~~~~~~~rd~l 370 (827)
|.++.++--++-..|..++. .+..++. .+. +.++.-|-|.+-++|.+=...-... +.++....-..-+
T Consensus 416 k~l~~l~d~~~~l~~~~~l~~~~~~i~~~l~~~l~~~~~~~W~~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~~ll 495 (980)
T 3ibv_A 416 KKLKIFQDTINSIDSSLFSSYMYSAITSSLSTAATLSPENSWQLIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLSQIL 495 (980)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhccccccccCcccchhHHHHHHH
Confidence 45556677777788999988 5554443 342 4568888888888886433221100 0011111122222
Q ss_pred HHHHHHhhc-ccchhHHHHHHHHHHHHHhC-CCCChHHHHHHHHHHHh--hcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 371 LNVLLDHMH-DVHTFVRTKVLQLFQRLVLD-KAIPVAFTLKLLERAIG--RLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 371 l~~L~er~~-D~n~~vRskvLq~~~~L~~~-~~iP~~~~~~v~~~av~--RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
..++..++. |.+|.||.-++-++.+.++= ..=| .+...++....+ .+.|++.-||.+|..++..+.+..+
T Consensus 496 ~~ll~s~i~~~~hp~V~~~~~~~l~rys~~~~~~~-~~l~~~L~~ll~~~gl~~~~~~V~~~a~~af~~f~~~~~ 569 (980)
T 3ibv_A 496 ALVTTSQVCRHPHPLVQLLYMEILVRYASFFDYES-AAIPALIEYFVGPRGIHNTNERVRPRAWYLFYRFVKSIK 569 (980)
T ss_dssp HHHHHSSTTTCCCHHHHHHHHHHHHHTGGGGGTCC-TTHHHHHHHHTSTTTTTCCCTTTHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHhcCc-hhHHHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhh
Confidence 222333332 88999999999999998872 2224 567889999999 9999999999999999999999887
No 56
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=91.05 E-value=35 Score=41.71 Aligned_cols=127 Identities=10% Similarity=0.105 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHhHHHHHhhHHHHHHhhcC--CCchHHHHHHHHHHHHHHHHhhcC----CCchHH-HHHHHHHHHHHHHh
Q psy8182 305 IAAFLNEVAAHGAEYVIPAMEELLLNLEK--ESYLMRNCTLTIVTELLINVYKRE----DLSDEA-KEQRDEYLNVLLDH 377 (827)
Q Consensus 305 ~s~FL~~Lae~~P~l~l~~is~l~~~Ld~--esy~lR~avle~~g~ii~~~~~~~----~~~~~~-~~~rd~ll~~L~er 377 (827)
.-..|.++ +..|.... .|+..+.+ .+..+|.+-.-.+-|.|....... ..+++. ..-|+.+++.|..
T Consensus 23 Ae~~L~~~-~~~p~~~~----~L~~il~~~~~~~~vR~~A~i~lkn~i~~~w~~~~~~~~l~~~~k~~ik~~ll~~l~~- 96 (960)
T 1wa5_C 23 SERNLRQL-ETQDGFGL----TLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMIS- 96 (960)
T ss_dssp HHHHHHHH-HTSTTHHH----HHHHHHHCTTSCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHh-hcCCCHHH----HHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHh-
Confidence 44566555 56676443 34444433 356899999999999998766533 234433 3457788877764
Q ss_pred hcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCC
Q psy8182 378 MHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPF 442 (827)
Q Consensus 378 ~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf 442 (827)
.++.+|+++=+++..+.... .| ..|..++...++.+..-+...+..|+..|..+....++
T Consensus 97 ---~~~~ir~~l~~~ia~ia~~d-~p-~~Wp~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~~~~ 156 (960)
T 1wa5_C 97 ---LPNNLQVQIGEAISSIADSD-FP-DRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRP 156 (960)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHH-ST-TTCTTHHHHHHTTCCSSCTTHHHHHHHHHHHHHGGGTT
T ss_pred ---CCHHHHHHHHHHHHHHHHhh-Cc-cchhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999998752 35 45677888888888887888999999999999887654
No 57
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=90.38 E-value=43 Score=41.60 Aligned_cols=135 Identities=10% Similarity=0.043 Sum_probs=93.7
Q ss_pred hhhhHHHHHHHHHHHHhHHHHHhhHHH-HHHhhcC--CCchHHHHHHHHHHHHHHHHhhcCCCchHHH----HHHHHHHH
Q psy8182 300 DSSKMIAAFLNEVAAHGAEYVIPAMEE-LLLNLEK--ESYLMRNCTLTIVTELLINVYKREDLSDEAK----EQRDEYLN 372 (827)
Q Consensus 300 ~g~k~~s~FL~~Lae~~P~l~l~~is~-l~~~Ld~--esy~lR~avle~~g~ii~~~~~~~~~~~~~~----~~rd~ll~ 372 (827)
..-|++...|.-++...+.-+++.+.. +...+++ .++.-|+|.+=++|-|.... . ++..+ +-...++.
T Consensus 428 ~~f~~~Rd~L~~l~~l~~~~~~~~~~~~l~~~l~~~~~~W~~~EA~~~a~gaIa~~~----~-~~~e~~~l~~vi~~Ll~ 502 (1023)
T 4hat_C 428 QLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTM----S-EDTEKRFVVTVIKDLLD 502 (1023)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHTTTSS----C-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHcCC----C-chhHHHHHHHHHHHHHH
Confidence 456778888999999888888777644 4455664 67999999999999765321 1 11122 23344444
Q ss_pred HHHH-hhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 373 VLLD-HMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 373 ~L~e-r~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
++.. |..|..+-||+-++-++.+.++==+....+...++......+.|...-|.-+|..-+.++-+.
T Consensus 503 l~~~~~~~d~k~~v~~t~~~~lGry~~wl~~~~~~L~~vl~~L~~~l~~~~~~v~~~A~~al~~l~~~ 570 (1023)
T 4hat_C 503 LCVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQK 570 (1023)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHHHTCHHHHHHCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCcchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Confidence 3332 234788889988888888777711112356788999999999988888999999888887765
No 58
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=88.65 E-value=0.75 Score=43.54 Aligned_cols=71 Identities=15% Similarity=0.273 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHH--HHhhc------------CCCChHHHHHHHHHH
Q psy8182 368 DEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLER--AIGRL------------MDKSSNVVKYTVQLL 433 (827)
Q Consensus 368 d~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~--av~RL------------~DKSs~VRk~Ai~Ll 433 (827)
+.+++.|..|+.|.+++|-.|||+++..||..+. ..+...+-.. ++.-| .|....||..|-.|+
T Consensus 48 ~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs--~~f~~~~r~~~~~Ik~l~~F~g~~dp~~G~d~g~~VR~~AkEl~ 125 (140)
T 1vdy_A 48 KEFSEFILKRLDNKSPIVKQKALRLIKYAVGKSG--SEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHETI 125 (140)
T ss_dssp HHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTTSC--HHHHHHHHHTTHHHHTTTTCCCCCCTTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcceeehHHHHHHHHHHhCC--HHHHHHHHHhHHHHHHHHhcCCCCCcccccchhHHHHHHHHHHH
Confidence 6899999999999999999999999999999873 3333222211 22222 245588999999888
Q ss_pred HHHHhhC
Q psy8182 434 KTMIESN 440 (827)
Q Consensus 434 ~~ll~~n 440 (827)
..|-...
T Consensus 126 ~ll~d~~ 132 (140)
T 1vdy_A 126 SAIFSEE 132 (140)
T ss_dssp HHHTCCS
T ss_pred HHHhCcC
Confidence 8765543
No 59
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=88.28 E-value=3 Score=44.20 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=80.5
Q ss_pred hhHHHHHH-hhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHH--HHHHHHHHHHHhhc-ccchhHHHHHHHHHHHHH
Q psy8182 322 PAMEELLL-NLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKE--QRDEYLNVLLDHMH-DVHTFVRTKVLQLFQRLV 397 (827)
Q Consensus 322 ~~is~l~~-~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~--~rd~ll~~L~er~~-D~n~~vRskvLq~~~~L~ 397 (827)
-.+..|+. +|.+++-.+|...+.++|++... ++..+. -..+.+..|..-+. |.+.-+|.+|+-++..||
T Consensus 81 G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~-------n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~ 153 (296)
T 1xqr_A 81 SGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQN-------VAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLV 153 (296)
T ss_dssp THHHHHHHTTTTCSSHHHHHHHHHHHHHHHTT-------CHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC-------CHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 34677888 99999999999999999998842 222221 11234444444443 457899999999999999
Q ss_pred hCCCCCh-HHH-HHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 398 LDKAIPV-AFT-LKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 398 ~~~~iP~-~~~-~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
..+.-.. .+. .+.+...+.-|.+.+..||+.|.-+|+.+...+|
T Consensus 154 ~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~ 199 (296)
T 1xqr_A 154 REQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHP 199 (296)
T ss_dssp TTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCG
T ss_pred cCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCh
Confidence 7542111 121 2456677777888999999999999999988754
No 60
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=88.23 E-value=18 Score=40.11 Aligned_cols=65 Identities=15% Similarity=0.050 Sum_probs=50.2
Q ss_pred HHHHHhhhCCCChhHHhHHHHHHHHHHHHhhccCCCChHHHHH--HHHHHHHHHHhcCcCChhhhhHHHHHHHHh
Q psy8182 749 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQ--RDEYLNVLLDHMHDVHTFVRTKVSTEKKLE 821 (827)
Q Consensus 749 ~s~L~~~Ld~Esy~lR~aVlev~g~ii~~~l~~~~~~e~~k~~--rd~~ld~L~er~~D~nayVRsKvlq~~~~l 821 (827)
+..|+..|.+.+..+|.....+++++.. ++..+.. ..+.++.|++-..|-|+-||.++...+.++
T Consensus 462 v~~l~~ll~~~~~~v~~~a~~~l~~l~~--------~~~~~~~i~~~~~~~~L~~l~~~~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 462 IPLFVQLLYSPIENIQRVAAGVLCELAQ--------DKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHTT--------SHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred ccHHHHHHcCCchHHHHHHHHHHHHHhc--------CHHHHHHHHHcCChHHHHHHhcCCCHHHHHHHHHHHHhc
Confidence 4567788888899999999999998752 1223222 345678899999999999999999998875
No 61
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=87.95 E-value=4.2 Score=42.06 Aligned_cols=114 Identities=6% Similarity=0.057 Sum_probs=84.2
Q ss_pred HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHh-hcccchhHHHHHHHHHHHHHhCCCC
Q psy8182 324 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDH-MHDVHTFVRTKVLQLFQRLVLDKAI 402 (827)
Q Consensus 324 is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er-~~D~n~~vRskvLq~~~~L~~~~~i 402 (827)
...+.+.+...+..+-...++++..++...-...............++..|.|+ +-|..+-+|.+++.++..+++...
T Consensus 57 ~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~- 135 (278)
T 4ffb_C 57 PTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDT- 135 (278)
T ss_dssp THHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSS-
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcC-
Confidence 445556677777888888888888776532111111122334568889999999 679999999999999999998633
Q ss_pred ChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 403 PVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 403 P~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
|. ..+.+....-+..|++-||-.++.+|..++....
T Consensus 136 ~~---~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg 171 (278)
T 4ffb_C 136 SI---TQSVELVIPFFEKKLPKLIAAAANCVYELMAAFG 171 (278)
T ss_dssp SS---HHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHT
T ss_pred cH---HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhC
Confidence 33 3356677778999999999999999999998744
No 62
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=87.95 E-value=5.8 Score=43.71 Aligned_cols=156 Identities=12% Similarity=0.191 Sum_probs=103.1
Q ss_pred hhhhHHHHhhhcccccHHHHHHHHHHHHh----h-CCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHH
Q psy8182 245 CTVKIVQLLKNCEHLVSPLAQAVVMFIRN----H-GCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEY 319 (827)
Q Consensus 245 ~~~~IiqlL~~~ehl~~~~Ae~v~~l~~~----~-~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l 319 (827)
...+++.+|..-.-.+. ++-+..+.+- + ..+++..+++++|-+.... .+..--|-++.||.+.....+.+
T Consensus 23 ~~~~v~~lln~A~~~~~--~~Kl~~L~q~~EL~l~~dpsLl~~fl~~il~f~~d---~~~~vRk~~a~FieEa~~~~~el 97 (386)
T 3o2t_A 23 TSERVVDLLNQAALITN--DSKITVLKQVQELIINKDPTLLDNFLDEIIAFQAD---KSIEVRKFVIGFIEEACKRDIEL 97 (386)
T ss_dssp HHHHHHHHHHHHHHCCS--THHHHHHHHHHHHHHTTCGGGGGGGHHHHHGGGGC---SCHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHhhhccCh--HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhccC---CcHHHHHHHHHHHHHHHHHHHHH
Confidence 44577777765322111 3344444331 1 4578999999999876653 46777899999999999999999
Q ss_pred HHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhC
Q psy8182 320 VIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLD 399 (827)
Q Consensus 320 ~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~ 399 (827)
..+.+..|..+|..+.-.+-+.++.+++.+...++. .+. .++++--.+=++|..+...
T Consensus 98 ~~~~l~~L~~LL~d~d~~V~K~~I~~~tslYpl~f~-----------------~i~-----~~~~~~~~~e~~W~~m~~l 155 (386)
T 3o2t_A 98 LLKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQ-----------------WMV-----KSRVISELQEACWDMVSAM 155 (386)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH-----------------HHH-----HC-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH-----------------HHh-----cCCCcchhHHHHHHHHHHH
Confidence 999999999999988888888888999988755432 111 1233222334566666553
Q ss_pred CCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHh
Q psy8182 400 KAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIE 438 (827)
Q Consensus 400 ~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~ 438 (827)
+ ..|+ +.+...+.-||=.|++|+..++.
T Consensus 156 K-------~~Il----~~~ds~n~GVrl~aiKFle~VIl 183 (386)
T 3o2t_A 156 A-------GDII----LLLDSDNDGIRTHAIKFVEGLIV 183 (386)
T ss_dssp H-------HHHH----HGGGCSSHHHHHHHHHHHHHHHH
T ss_pred H-------HHHH----HHhccCCcchHHHHHHHHHHHHH
Confidence 1 1222 22445677777777777777665
No 63
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=87.79 E-value=4.6 Score=47.34 Aligned_cols=138 Identities=19% Similarity=0.167 Sum_probs=91.3
Q ss_pred hhHHHHHHHHHHHHhHHHHHhh-HHHHHHhhcC--CCchHHHHHHHHHHHHHHHHhhcCC-------CchHHH------H
Q psy8182 302 SKMIAAFLNEVAAHGAEYVIPA-MEELLLNLEK--ESYLMRNCTLTIVTELLINVYKRED-------LSDEAK------E 365 (827)
Q Consensus 302 ~k~~s~FL~~Lae~~P~l~l~~-is~l~~~Ld~--esy~lR~avle~~g~ii~~~~~~~~-------~~~~~~------~ 365 (827)
-|+--.=|..+|+..|..|-.+ +..|+.-|.. +.--+=.+++|++.+++...-..++ .++-.. -
T Consensus 39 RR~Av~~Lk~~sk~y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~ 118 (651)
T 3grl_A 39 RRNAVRALKSLSKKYRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFI 118 (651)
T ss_dssp HHHHHHHHHHTTTTTTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHH
Confidence 3444444555667777776544 7777777654 4455666788888877642111100 000001 1
Q ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHH------HHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 366 QRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLE------RAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 366 ~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~------~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
++..-+..|.+-+-.-+.|+|--++|++..||..+ |...+.-++. .-++-|.|+.-.+|-.|+-||..+...
T Consensus 119 ~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r--~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~ 196 (651)
T 3grl_A 119 KQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQL--GPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRS 196 (651)
T ss_dssp HSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHS--HHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTT
T ss_pred cCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcC--cHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcC
Confidence 33455667777777889999999999999999975 5444444443 345568999999999999999999999
Q ss_pred CC
Q psy8182 440 NP 441 (827)
Q Consensus 440 nP 441 (827)
||
T Consensus 197 n~ 198 (651)
T 3grl_A 197 NG 198 (651)
T ss_dssp CH
T ss_pred CH
Confidence 97
No 64
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=87.43 E-value=22 Score=42.58 Aligned_cols=143 Identities=14% Similarity=0.065 Sum_probs=98.6
Q ss_pred CCchhhhHHHHHHHHHHHHhHH---HH--HhhHHHHHHhhcCCCchHHHHHHHHHHHHHHH-------------------
Q psy8182 297 AGQDSSKMIAAFLNEVAAHGAE---YV--IPAMEELLLNLEKESYLMRNCTLTIVTELLIN------------------- 352 (827)
Q Consensus 297 ~D~~g~k~~s~FL~~Lae~~P~---l~--l~~is~l~~~Ld~esy~lR~avle~~g~ii~~------------------- 352 (827)
.+....+..+.-|..|+...+. .+ ..-+..|+.+|.+++..+|..++.++.++...
T Consensus 246 ~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~ 325 (780)
T 2z6g_A 246 PVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVN 325 (780)
T ss_dssp SCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHH
Confidence 3566778888888888865433 22 23467889999988888888887777654421
Q ss_pred HhhcCCCchHHH-------------------HHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy8182 353 VYKREDLSDEAK-------------------EQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLER 413 (827)
Q Consensus 353 ~~~~~~~~~~~~-------------------~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~ 413 (827)
.+++.+ .+..+ -...+.+..|.+-+.+.++-+|..++.++..|+....-+.. ...++..
T Consensus 326 lL~~~~-~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~-~~~~i~~ 403 (780)
T 2z6g_A 326 IMRTYT-YEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEG-MEGLLGT 403 (780)
T ss_dssp HHTTCC-CHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTCSC-CHHHHHH
T ss_pred HHhcCC-HHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhhhh-hhhHHHH
Confidence 112111 11100 01234567888888888999999999999999986532222 2567777
Q ss_pred HHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 414 AIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 414 av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
.+.-|.+++..||++|...|..|...+|
T Consensus 404 Lv~lL~~~d~~vr~~A~~aL~~L~~~~~ 431 (780)
T 2z6g_A 404 LVQLLGSDDINVVTCAAGILSNLTCNNY 431 (780)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHTSSCH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhCCH
Confidence 8888999999999999999999765543
No 65
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=86.97 E-value=20 Score=41.66 Aligned_cols=143 Identities=14% Similarity=0.059 Sum_probs=94.0
Q ss_pred CCchhhhHHHHHHHHHHHHhHH---HH--HhhHHHHHHhhcCCCchHHHHHHHHHHHHHHH-------------------
Q psy8182 297 AGQDSSKMIAAFLNEVAAHGAE---YV--IPAMEELLLNLEKESYLMRNCTLTIVTELLIN------------------- 352 (827)
Q Consensus 297 ~D~~g~k~~s~FL~~Lae~~P~---l~--l~~is~l~~~Ld~esy~lR~avle~~g~ii~~------------------- 352 (827)
.|....+....-|..++...+. .+ ..-+..|+.+|.+++..+|.+.+.+++++...
T Consensus 110 ~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~ 189 (644)
T 2z6h_A 110 PVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVN 189 (644)
T ss_dssp SSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHH
Confidence 3555667777778888765321 22 23477888889888888888887777776531
Q ss_pred HhhcCCCchH------------------HH-HHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy8182 353 VYKREDLSDE------------------AK-EQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLER 413 (827)
Q Consensus 353 ~~~~~~~~~~------------------~~-~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~ 413 (827)
.+.+.+ .+. .. -...+.+..|.+.+.+.++-+|..++.++..|+....-.. ....++..
T Consensus 190 lL~~~~-~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~~~~~~~-~~~~~i~~ 267 (644)
T 2z6h_A 190 IMRTYT-YEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQE-GMEGLLGT 267 (644)
T ss_dssp HHTTCC-CHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGGGCTTCC-SCHHHHHH
T ss_pred HHHcCC-hHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcchhhh-hhhhHHHH
Confidence 111111 010 00 1123456778888888888899999999999987542221 22467777
Q ss_pred HHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 414 AIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 414 av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
.+.-|.+.+..||.+|...|..+-..+|
T Consensus 268 Lv~lL~~~d~~v~~~a~~aL~~L~~~~~ 295 (644)
T 2z6h_A 268 LVQLLGSDDINVVTCAAGILSNLTCNNY 295 (644)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHcCCH
Confidence 7788888889999999999988766543
No 66
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=86.79 E-value=25 Score=36.43 Aligned_cols=119 Identities=14% Similarity=0.180 Sum_probs=92.2
Q ss_pred CcchHHHHHHHHhcccCCCccCCCcchhHHHHHHHHHHHHhHHHHHhhHHHHHhhhCCCChhHHhHHHHHHHHHHHHhhc
Q psy8182 701 CKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYK 780 (827)
Q Consensus 701 ~~~l~~eilreI~~~~~~d~~~Ds~g~K~~s~FL~~Lae~~P~lvl~~~s~L~~~Ld~Esy~lR~aVlev~g~ii~~~l~ 780 (827)
.+++..+++++|-+... .++..--|-++.|+.|....-|.+..+.+..|..+|.+++..+-..++++++.+...++.
T Consensus 47 dp~ll~~~l~~il~~~~---~~~~~vrk~~~~Fi~e~~~~k~~l~~~~l~~L~~Ll~d~d~~V~K~~I~~~~~iY~~~l~ 123 (257)
T 3gs3_A 47 CAELAEEFLESVLSLAH---DSNMEVRKQVVAFVEQVCKVKVELLPHVINVVSMLLRDNSAQVIKRVIQACGSIYKNGLQ 123 (257)
T ss_dssp TGGGHHHHHHHHHGGGG---CSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHhcc---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999998542 256667789999999999999999999999999999999999999999999998877653
Q ss_pred ----cCCCChHHH---HHHHHHHHHHHHhcCcCChhhhhHHHHHHHHhh
Q psy8182 781 ----REDLSDEAK---EQRDEYLNVLLDHMHDVHTFVRTKVSTEKKLEC 822 (827)
Q Consensus 781 ----~~~~~e~~k---~~rd~~ld~L~er~~D~nayVRsKvlq~~~~lc 822 (827)
+...++... .....+=+.+...+-..|.=||..++.-+.+++
T Consensus 124 ~i~~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~n~gvkl~~iKF~e~vI 172 (257)
T 3gs3_A 124 YLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKFLEGVV 172 (257)
T ss_dssp HHTTSSSCCHHHHHHHHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCcchHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH
Confidence 333332221 334444444555566689999999998877765
No 67
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=86.62 E-value=33 Score=35.71 Aligned_cols=181 Identities=10% Similarity=0.048 Sum_probs=118.9
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhC---CCCChHH-
Q psy8182 331 LEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLD---KAIPVAF- 406 (827)
Q Consensus 331 Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~---~~iP~~~- 406 (827)
|=+.++.-|.+.++.+-+.+... .++--..-|-+|..+.-|+.|.|+-|=.++|+++..+++. .......
T Consensus 55 lfs~d~k~~~~ale~L~~~l~~~------~~~~~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ 128 (266)
T 2of3_A 55 LFHKDFKQHLAALDSLVRLADTS------PRSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQE 128 (266)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHHC------HHHHHHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred hcCCCHHHHHHHHHHHHHHhhhC------hHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchHH
Confidence 33447899999999988876531 2334456677888888899999999999999999988651 1122222
Q ss_pred -HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCCC-------CCCChhHHHHhhhhhhhhhhhHhhhhhhcCCCCch
Q psy8182 407 -TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFA-------AKATTQYYVQAELTLEEFNERIKDCFEALDNDGPM 478 (827)
Q Consensus 407 -~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf~-------~~L~~~~~v~ev~~l~ei~~~L~e~~~Al~~e~~~ 478 (827)
-..++...+.||-|--..||.++.+++..+..-.|.. .-+...-|-....-+.++..-++.. |..
T Consensus 129 ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~-------G~~ 201 (266)
T 2of3_A 129 EVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNA-------GIS 201 (266)
T ss_dssp HHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHH-------CSG
T ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhc-------CCC
Confidence 2678899999999999999999999998877655532 1122222333333333333333221 111
Q ss_pred hhhhhhhhHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHhHhhhhc
Q psy8182 479 FILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLS 526 (827)
Q Consensus 479 ~i~e~FD~lySll~~~~~l~~~~~~~l~~~~l~~~~s~l~~~l~~~~~ 526 (827)
-...+.....+.+.++.=++.+|.-.+ ..+..+....+..+-.++.
T Consensus 202 -~~~~l~~~~~ia~ll~D~d~~VR~aAl-~~lve~y~~~Gd~v~k~lg 247 (266)
T 2of3_A 202 -PLKSLSVEKTVAPFVGDKDVNVRNAAI-NVLVACFKFEGDQMWKAAG 247 (266)
T ss_dssp -GGGGGCHHHHHGGGGGCSSHHHHHHHH-HHHHHHHHHHTTHHHHHHC
T ss_pred -ccccccchHHHHHHHcCCCHHHHHHHH-HHHHHHHHHhhHHHHHHHh
Confidence 011221116677777777788888888 7777777777777766663
No 68
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=84.98 E-value=16 Score=38.51 Aligned_cols=114 Identities=16% Similarity=0.185 Sum_probs=81.4
Q ss_pred hHHHHHHhhcC-CCchHHHHHHHHHHHHHHHHhhcCCCchHHHHH-HHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCC
Q psy8182 323 AMEELLLNLEK-ESYLMRNCTLTIVTELLINVYKREDLSDEAKEQ-RDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDK 400 (827)
Q Consensus 323 ~is~l~~~Ld~-esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~-rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~ 400 (827)
-+..|+.+|.+ .+-.+|...+-++++++... .+..+.- ..+.+..|..-+.+-++-+|.+|.-++..|+..+
T Consensus 125 ~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~------~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~ 198 (296)
T 1xqr_A 125 ALRKLLRLLDRDACDTVRVKALFAISCLVREQ------EAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGH 198 (296)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTC------HHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHccCCCHHHHHHHHHHHHHHHcCC------cHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC
Confidence 35667777775 46789999999999988521 0111111 1245667777777789999999999999999863
Q ss_pred CCChHH--HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCC
Q psy8182 401 AIPVAF--TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPF 442 (827)
Q Consensus 401 ~iP~~~--~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf 442 (827)
.--... ..+++...+.-|.+++..||..|+..|..++..+|+
T Consensus 199 ~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~~~~ 242 (296)
T 1xqr_A 199 PEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQ 242 (296)
T ss_dssp GGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhCChh
Confidence 111111 235777778889999999999999999999977553
No 69
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=82.89 E-value=36 Score=38.41 Aligned_cols=136 Identities=10% Similarity=0.088 Sum_probs=94.5
Q ss_pred CCchhhhHHHHHHHHHHHHhHHH---HH--hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHH--HHHH
Q psy8182 297 AGQDSSKMIAAFLNEVAAHGAEY---VI--PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKE--QRDE 369 (827)
Q Consensus 297 ~D~~g~k~~s~FL~~Lae~~P~l---~l--~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~--~rd~ 369 (827)
.|.....+.+.-|..++...+.. +. .-+..|+.+|.+++..++...+.++|+|... ++.... ...+
T Consensus 263 ~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~-------~~~~~~~i~~~g 335 (529)
T 3tpo_A 263 NDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTG-------TDEQTQKVIDAG 335 (529)
T ss_dssp SCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTS-------CHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHcc-------chHHHHHHhhcc
Confidence 35555556666666676544332 22 2367788999999999999999999998631 222221 2234
Q ss_pred HHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChH--HHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh
Q psy8182 370 YLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVA--FTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 370 ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~--~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
.+..|..-+.+.++.+|..|..++..|+..+.--.. .-.+++...+.-|.+.+.-||+.|...|+.+...
T Consensus 336 ~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~ 407 (529)
T 3tpo_A 336 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSG 407 (529)
T ss_dssp GGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcC
Confidence 555666666788999999999999999975311000 1134677788889999999999999999988764
No 70
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=82.14 E-value=79 Score=36.45 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=82.6
Q ss_pred hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHH--HHHHHHHHHHhhccc-chhHHHHHHHHHHHHHh
Q psy8182 322 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQ--RDEYLNVLLDHMHDV-HTFVRTKVLQLFQRLVL 398 (827)
Q Consensus 322 ~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~--rd~ll~~L~er~~D~-n~~vRskvLq~~~~L~~ 398 (827)
..+..|.++|.++.-.+|...+.+++++-... +..+.. ..+.+..|.+.+.+. ++-+|..+..++..|+.
T Consensus 14 g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~-------~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~ 86 (644)
T 2z6h_A 14 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-------ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH 86 (644)
T ss_dssp TTHHHHHHHHTCSCHHHHHHHHHHHHHHHTST-------THHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHcCCCHHHHHHHHHHHHHHHCCC-------hhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhc
Confidence 45778888998999999999999999886421 121111 136677777777654 88999999999999887
Q ss_pred CCCCChHHH--HHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 399 DKAIPVAFT--LKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 399 ~~~iP~~~~--~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
... +.... .+.+...+.-|.+....||+.|+..|..+...++
T Consensus 87 ~~~-~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~ 130 (644)
T 2z6h_A 87 HRE-GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQE 130 (644)
T ss_dssp SHH-HHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHST
T ss_pred Chh-hHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcc
Confidence 522 11111 2466777888999999999999999999988764
No 71
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=80.25 E-value=19 Score=39.66 Aligned_cols=149 Identities=13% Similarity=0.185 Sum_probs=104.8
Q ss_pred hhHHHHHHHHhhhcccchHHHHHHHHHHHh-----cCCcchHHHHHHHHhcccCCCccCCCcchhHHHHHHHHHHHHhHH
Q psy8182 669 SCTVKIVQLLKNCEHLVSPLAQAVVMFIRN-----HGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAE 743 (827)
Q Consensus 669 ~~~~~IiqlL~~~Ehl~~~~Ae~v~~l~~~-----~~~~~l~~eilreI~~~~~~d~~~Ds~g~K~~s~FL~~Lae~~P~ 743 (827)
+...+|+.+|..---.+. ++=+..|.+- +..+++..+++++|-+.... ++..--|-++.||.|....-+.
T Consensus 22 ~~~~~v~~lln~A~~~~~--~~Kl~~L~q~~EL~l~~dpsLl~~fl~~il~f~~d---~~~~vRk~~a~FieEa~~~~~e 96 (386)
T 3o2t_A 22 TTSERVVDLLNQAALITN--DSKITVLKQVQELIINKDPTLLDNFLDEIIAFQAD---KSIEVRKFVIGFIEEACKRDIE 96 (386)
T ss_dssp CHHHHHHHHHHHHHHCCS--THHHHHHHHHHHHHHTTCGGGGGGGHHHHHGGGGC---SCHHHHHHHHHHHHHHHHHCGG
T ss_pred cHHHHHHHHHHhhhccCh--HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhccC---CcHHHHHHHHHHHHHHHHHHHH
Confidence 366788887764432121 3333443331 24688999999999876543 5677789999999999999999
Q ss_pred HHHhhHHHHHhhhCCCChhHHhHHHHHHHHHHHHhh----ccCCCChHHH---HHHHHHHHHHHHhcCcCChhhhhHHHH
Q psy8182 744 YVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVY----KREDLSDEAK---EQRDEYLNVLLDHMHDVHTFVRTKVST 816 (827)
Q Consensus 744 lvl~~~s~L~~~Ld~Esy~lR~aVlev~g~ii~~~l----~~~~~~e~~k---~~rd~~ld~L~er~~D~nayVRsKvlq 816 (827)
++.+.+..|..+|..++-.+-..++++++.+...++ ++...++..+ .....+=+.+...+-..|.=||..++.
T Consensus 97 l~~~~l~~L~~LL~d~d~~V~K~~I~~~tslYpl~f~~i~~~~~~~~~~e~~W~~m~~lK~~Il~~~ds~n~GVrl~aiK 176 (386)
T 3o2t_A 97 LLLKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIRTHAIK 176 (386)
T ss_dssp GHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHhccCCcchHHHHHH
Confidence 999999999999999988888889999999876544 3443332211 333444444444466689999999998
Q ss_pred HHHHhh
Q psy8182 817 EKKLEC 822 (827)
Q Consensus 817 ~~~~lc 822 (827)
-+.+++
T Consensus 177 Fle~VI 182 (386)
T 3o2t_A 177 FVEGLI 182 (386)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 72
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=79.27 E-value=37 Score=38.21 Aligned_cols=181 Identities=10% Similarity=0.075 Sum_probs=112.8
Q ss_pred CCchhhhHHHHHHHHHHHHhHHH---HHh--hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHH--HHHH
Q psy8182 297 AGQDSSKMIAAFLNEVAAHGAEY---VIP--AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKE--QRDE 369 (827)
Q Consensus 297 ~D~~g~k~~s~FL~~Lae~~P~l---~l~--~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~--~rd~ 369 (827)
.|.....+.+.-|..|+...+.. +.. -+..|+.+|.+++..+|...+.++|++... ++.... ...+
T Consensus 244 ~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~-------~~~~~~~i~~~g 316 (510)
T 3ul1_B 244 NDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTG-------TDEQTQKVIDAG 316 (510)
T ss_dssp SCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTS-------CHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcC-------CHHHHHHHhhcc
Confidence 34455556666666676544432 222 367788999999999999999999998632 222221 1234
Q ss_pred HHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHH-----HHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCCCC
Q psy8182 370 YLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFT-----LKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFAA 444 (827)
Q Consensus 370 ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~-----~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf~~ 444 (827)
.+..|..-+.+.+..+|..|..++..|+..+ .... .+++...+.-|.+.+..||+.|...|..+.....
T Consensus 317 ~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~---~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~--- 390 (510)
T 3ul1_B 317 ALAVFPSLLTNPKTNIQKEATWTMSNITAGR---QDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGT--- 390 (510)
T ss_dssp GGGGCC-CTTCSSHHHHHHHHHHHHHHTTSC---HHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCC---
T ss_pred chHHHHHHhcCCCHHHHHHHHHHHHHHHcCc---HHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCC---
Confidence 4555666667888999999999999998753 2222 2466778888999999999999999999876532
Q ss_pred CCChhHHHHhhhhhhhhhhhHhhhhhhcCCCCchhhhhhhhhHHHhhhcccccc
Q psy8182 445 KATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIE 498 (827)
Q Consensus 445 ~L~~~~~v~ev~~l~ei~~~L~e~~~Al~~e~~~~i~e~FD~lySll~~~~~l~ 498 (827)
.+.+...... ..+..+..-+...++..+....+.+..+++....++
T Consensus 391 ----~~~~~~L~~~----g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~~~~~~ 436 (510)
T 3ul1_B 391 ----VEQIVYLVHC----GIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLG 436 (510)
T ss_dssp ----HHHHHHHHHT----TCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ----HHHHHHHHHC----CCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhcc
Confidence 1111111111 112223333334455445556666666666555443
No 73
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=78.19 E-value=1.2e+02 Score=36.13 Aligned_cols=137 Identities=11% Similarity=0.133 Sum_probs=90.1
Q ss_pred CchhhhHHHHHHHHHHHHhHH--HHH---hhHHHHHHhhcC-CCchHHHHHHHHHHHHHHHHhhcCCCchHH-HHHHHHH
Q psy8182 298 GQDSSKMIAAFLNEVAAHGAE--YVI---PAMEELLLNLEK-ESYLMRNCTLTIVTELLINVYKREDLSDEA-KEQRDEY 370 (827)
Q Consensus 298 D~~g~k~~s~FL~~Lae~~P~--l~l---~~is~l~~~Ld~-esy~lR~avle~~g~ii~~~~~~~~~~~~~-~~~rd~l 370 (827)
|...-++...-|..|+...+. .+. .-+..|+..|.+ ++..+|.+.+.+++++... .+.. .-.+.+.
T Consensus 163 d~~vr~~A~~~L~~L~~~~~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~-------~~~~~~i~~~g~ 235 (780)
T 2z6g_A 163 DQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHH-------REGLLAIFKSGG 235 (780)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS-------HHHHHHHHHTTH
T ss_pred CHHHHHHHHHHHHHHhCCChhHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-------chhHHHHHHcCC
Confidence 444445555566666643221 111 235667777764 4788998888998885331 1111 1223467
Q ss_pred HHHHHHhhcccchhHHHHHHHHHHHHHhCCC--CChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 371 LNVLLDHMHDVHTFVRTKVLQLFQRLVLDKA--IPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 371 l~~L~er~~D~n~~vRskvLq~~~~L~~~~~--iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
+..|.+-+.+-++-+|..|+.++..|+.... ...-...+++...+.-|.+.+..||..|...|..+-..|+
T Consensus 236 I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~ 308 (780)
T 2z6g_A 236 IPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQ 308 (780)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCh
Confidence 7888888888899999999999999998531 1111123567778888999999999999999887655443
No 74
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=76.59 E-value=28 Score=40.85 Aligned_cols=113 Identities=19% Similarity=0.179 Sum_probs=78.0
Q ss_pred hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH--HHHHHHHHhhcccchhHHHHHHHHHHHHHhC
Q psy8182 322 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRD--EYLNVLLDHMHDVHTFVRTKVLQLFQRLVLD 399 (827)
Q Consensus 322 ~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd--~ll~~L~er~~D~n~~vRskvLq~~~~L~~~ 399 (827)
.++..|+.+|+++.|..|-..++++..+...--. ..++.-.+ .=+..|.+-+.|.+--+|..++-++..|+..
T Consensus 122 ~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~-----~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~ 196 (651)
T 3grl_A 122 ENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGP-----QVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRS 196 (651)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHH-----HHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcH-----HHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcC
Confidence 4688999999999999999999999988864211 01111111 2234577777888999999999999999997
Q ss_pred CCCC---h------HHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCC
Q psy8182 400 KAIP---V------AFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPF 442 (827)
Q Consensus 400 ~~iP---~------~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf 442 (827)
+.-= + .+...+++.-.+ + +.+.|=.-++.+|..|+..||.
T Consensus 197 n~~iQklVAFEnaFe~Lf~Ii~~Eg~-~--~Ggivv~DCL~ll~nLLr~N~s 245 (651)
T 3grl_A 197 NGAIQKIVAFENAFERLLDIITEEGN-S--DGGIVVEDCLILLQNLLKNNNS 245 (651)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHHTG-G--GSHHHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHhccHHHHHHHHHhcCC-C--ccchhHHHHHHHHHHHHhcCHH
Confidence 5110 0 011222222222 2 5678888899999999999984
No 75
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=76.00 E-value=1.6e+02 Score=36.31 Aligned_cols=132 Identities=13% Similarity=0.060 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHHHHhHHHHHhhHHHHH-HhhcC--CCchHHHHHHHHHHHHHHHHhhcCCCchH-HHHHHHHHHHHHHH-
Q psy8182 302 SKMIAAFLNEVAAHGAEYVIPAMEELL-LNLEK--ESYLMRNCTLTIVTELLINVYKREDLSDE-AKEQRDEYLNVLLD- 376 (827)
Q Consensus 302 ~k~~s~FL~~Lae~~P~l~l~~is~l~-~~Ld~--esy~lR~avle~~g~ii~~~~~~~~~~~~-~~~~rd~ll~~L~e- 376 (827)
-|+.+.+|..++...|..+++.+...+ .++++ .++.-|.|.+-++|.|-.. ..+. .+.-...++..|..
T Consensus 430 ~~~~~~~L~~l~~~~~~~~l~~v~~~l~~~l~~~~~~W~~~eaal~algsia~~------~~~~~e~~~l~~v~~~l~~l 503 (1049)
T 3m1i_C 430 YKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGT------MSEDTEKRFVVTVIKDLLDL 503 (1049)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTTS------SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhcc------cCchhhHHHHHHHHHHHHHH
Confidence 457889999999999988887765544 44653 6788999999999954311 1121 12224555555543
Q ss_pred --hh--cccchhHHHHHHHHHHHHHhC-CCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhC
Q psy8182 377 --HM--HDVHTFVRTKVLQLFQRLVLD-KAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESN 440 (827)
Q Consensus 377 --r~--~D~n~~vRskvLq~~~~L~~~-~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~n 440 (827)
.. .|-++-||+.++.++.+.++- ..-| .+...++......|.|.+.-||..|...+.++.+..
T Consensus 504 ~~~~~~~~~~~~v~~~~~~~lgry~~~~~~~~-~~l~~vl~~ll~~l~~~~~~V~~~A~~al~~l~~~~ 571 (1049)
T 3m1i_C 504 TVKKRGKDNKAVVASDIMYVVGQYPRFLKAHW-NFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKC 571 (1049)
T ss_dssp TTSSCSHHHHHHHHHHHHHHHHHCHHHHHHCH-HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HhhhccccchHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 22 256778888888888877652 1113 567889999999999999999999999999999864
No 76
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=73.59 E-value=73 Score=32.58 Aligned_cols=168 Identities=11% Similarity=0.036 Sum_probs=105.4
Q ss_pred HHHHhhhcccccHHHHHHHHHHHHhhCCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHH
Q psy8182 249 IVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELL 328 (827)
Q Consensus 249 IiqlL~~~ehl~~~~Ae~v~~l~~~~~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~ 328 (827)
+.+-+..-||.=.++-++...+...++.+ +++. ++..-.. .++-..|-++.|+.- .. +. .-.-+..+.
T Consensus 42 ~~~~~~~~~~gf~~~~~~a~~~~~~~~~~----~~~~-la~~L~~---~~~deVR~~Av~lLg--~~-~~-~~~~L~~ir 109 (240)
T 3l9t_A 42 LEKDFSLIEHGFKEEEQRALTDYKSNDGE----YIKK-LAFLAYQ---SDVYQVRMYAVFLFG--YL-SK-DKEILIFMR 109 (240)
T ss_dssp HHHHHTC-----CHHHHHHHHHHHHSCHH----HHHH-HHHHHHT---CSSHHHHHHHHHHHH--HT-TT-SHHHHHHHH
T ss_pred HHHHHHHhhcccHHHHHHHHHHHHhCCHH----HHHH-HHHHHHh---CcchHHHHHHHHHHH--hc-cC-cHHHHHHHH
Confidence 44444455666666667776777766633 2222 2222222 355678888888643 32 21 133445555
Q ss_pred H-hhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHH
Q psy8182 329 L-NLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFT 407 (827)
Q Consensus 329 ~-~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~ 407 (827)
+ +-+.+++-+|-.+-.++++++... +. +..++.+.+=..|-|+.||--|+-...--|.. ..+....
T Consensus 110 ~~va~D~~WrVre~lA~a~~~~~~~~--~p----------e~~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~-~~~k~dp 176 (240)
T 3l9t_A 110 DEVSKDNNWRVQEVLAKAFDEFCKKI--EY----------KKALPIIDEWLKSSNLHTRRAATEGLRIWTNR-PYFKENP 176 (240)
T ss_dssp HTGGGCSCHHHHHHHHHHHHHHHHHH--CT----------TTTHHHHHHHHHCSSHHHHHHHHHHTCSGGGS-TTTTTCH
T ss_pred HHhCCCCCccHHHHHHHHHHHHHHhc--CH----------HHHHHHHHHHhcCCCHHHHHHHHHhhHHHhcc-chhhcCH
Confidence 5 566788988888777777777521 11 12567788888999999999988774332322 1233444
Q ss_pred HHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 408 LKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 408 ~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
..++..+..-..|+|-.|||+--.-|.-+-.+||
T Consensus 177 ~~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~P 210 (240)
T 3l9t_A 177 NEAIRRIADLKEDVSEYVRKSVGNALRDISKKFP 210 (240)
T ss_dssp HHHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhCH
Confidence 6788888888999999999998888888888888
No 77
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=73.05 E-value=1.7e+02 Score=35.31 Aligned_cols=442 Identities=11% Similarity=0.073 Sum_probs=233.8
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCC-----c----hHHHHHHHHHHHHHHHhhcc--cchhHHHHHHHHHH
Q psy8182 326 ELLLNLEKESYLMRNCTLTIVTELLINVYKREDL-----S----DEAKEQRDEYLNVLLDHMHD--VHTFVRTKVLQLFQ 394 (827)
Q Consensus 326 ~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~-----~----~~~~~~rd~ll~~L~er~~D--~n~~vRskvLq~~~ 394 (827)
-+..++++++-..=+|..-++..++-.....+.- + +..++..+.++..|.+=+.| ++++.|-.+|.++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~ 175 (810)
T 3now_A 96 WFMRVLDQKHENCVSTAQFCLQTILNALSGLKNKPDSKPDKELCTRNNREIDTLLTCLVYSITDRTISGAARDGVIELIT 175 (810)
T ss_dssp HHHHHHHCCSTTHHHHHHHHHHHHHHHHHTCCSSTTCCCCHHHHHHTHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhccccccccCCcHHHHhhhhhHHHHHHHHHHHHhhccccChhhHHHHHHHHH
Confidence 4556666666555555555555555543222221 1 13456778888888888866 68999999999999
Q ss_pred HHHhCC--CCChHH-----HHHHHHHHHhhcCCC--------ChHHHHHHHHHHHHHHhhCCCCCC-----CChhHHHHh
Q psy8182 395 RLVLDK--AIPVAF-----TLKLLERAIGRLMDK--------SSNVVKYTVQLLKTMIESNPFAAK-----ATTQYYVQA 454 (827)
Q Consensus 395 ~L~~~~--~iP~~~-----~~~v~~~av~RL~DK--------Ss~VRk~Ai~Ll~~ll~~nPf~~~-----L~~~~~v~e 454 (827)
+-+-.. ..|..+ ..++++ +.+.+.+- ++.+|-+|--+|.++.+.--|-+. =..+++++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~g~~~~l~-v~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (810)
T 3now_A 176 RNVHYTALEWAERLVEIRGLCRLLD-VCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFTDQIDEYIKD 254 (810)
T ss_dssp HHTTCTTTTHHHHHHHTTHHHHHHH-HHTCCSSSCCSSCCCCCTTHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHH
T ss_pred HhCCccccccccchhhHhhHHHHHH-HHhcCccccccccCCCChhHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Confidence 999544 344332 123444 44566665 889999999999999998776432 112333555
Q ss_pred hhhhhhhhhhHhhhh--hhcCCCCchhhhhhh---hhHHHhhhccccccHHHHHHHHHHHHHHHHHHH----------HH
Q psy8182 455 ELTLEEFNERIKDCF--EALDNDGPMFILENF---DTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEF----------SS 519 (827)
Q Consensus 455 v~~l~ei~~~L~e~~--~Al~~e~~~~i~e~F---D~lySll~~~~~l~~~~~~~l~~~~l~~~~s~l----------~~ 519 (827)
......+++.+..+| .++.|..+..-...| ..+-.+++..++-+...+.+.+ ..+..+.+.- ..
T Consensus 255 ~~~~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~-~al~~aa~~~~~R~~I~~~gv~ 333 (810)
T 3now_A 255 KLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQRVAC-ECLIAASSKKDKAKALCEQGVD 333 (810)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHHHHHHH-HHHHHHTTSHHHHHTTHHHHHH
T ss_pred HhccCChHhHHHHHHHHHHHhcCCHHHHHHHHhccchHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCcHHHHHHHHcCcH
Confidence 555667777887777 555466555545555 5566666666666777777777 5553221110 00
Q ss_pred hHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccchhhhhhhhhhhhhhhhhhcccccCcchhhHHHH
Q psy8182 520 ILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHKIVIDAKARKVKVRAAIKHNEKMQWDWDFHLSNG 599 (827)
Q Consensus 520 ~l~~~~~~~~~~~~~~~~~~~~lkm~~fLl~~~~~~~e~~~~~~~~~~~~~~kg~k~~~~~~~~~~~~~~~~W~~~r~~~ 599 (827)
-+..++... + +. . ++ .-+.-|+++-.... .. .+ ...+. +...+.+
T Consensus 334 ~L~~Ll~s~--~-~~-v--r~---~Al~~L~kl~s~~~-----~d-~~-------------------~~~~~-~g~i~~L 378 (810)
T 3now_A 334 ILKRLYHSK--N-DG-I--RV---RALVGLCKLGSYGG-----QD-AA-------------------IRPFG-DGAALKL 378 (810)
T ss_dssp HHHHHTTCS--C-HH-H--HH---HHHHHHHHHHTTTT-----TT-TS-------------------CCSST-TTHHHHH
T ss_pred HHHHHHcCC--C-HH-H--HH---HHHHHHHHhccccc-----cC-cc-------------------ccchh-hccHHHH
Confidence 011111100 0 00 0 00 00001111100000 00 00 00000 0112333
Q ss_pred HHHHHHHhccc-------------cccccCCChhhHHHHH--HHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHhh
Q psy8182 600 LNSIHQILKSK-------------INKLWDPPVVEEEFVN--MVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRY 664 (827)
Q Consensus 600 L~~l~~~L~l~-------------l~~lw~~~~~ee~Fi~--l~~~~~y~lLE~~~~~~~K~~~ir~~if~il~~~vk~y 664 (827)
+..+.++|.-+ |.+|=.-+.+++.++. -+..+...+|.++ +..+.-.+-.+|+-+++.|
T Consensus 379 v~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s~------d~~i~~~al~~L~NLt~~~ 452 (810)
T 3now_A 379 AEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARGG------NQSCLYGVVTTFVNLCNAY 452 (810)
T ss_dssp HHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHTT------CGGGHHHHHHHHHHHTTCS
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhCCC------ChHHHHHHHHHHHHHcCCc
Confidence 33333333211 2222223456666664 4666666777654 2446666666776666644
Q ss_pred C----------------c----------------------chhhHHHHHHHHhhhc-ccchHHHHHHHHHHHhcCCcc--
Q psy8182 665 N----------------H----------------------GISCTVKIVQLLKNCE-HLVSPLAQAVVMFIRNHGCKS-- 703 (827)
Q Consensus 665 ~----------------h----------------------~~~~~~~IiqlL~~~E-hl~~~~Ae~v~~l~~~~~~~~-- 703 (827)
. | ..++...++++|..-. ..-+..|..+.-++...++.+
T Consensus 453 d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~V 532 (810)
T 3now_A 453 EKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKV 532 (810)
T ss_dssp CCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred hhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 1 1 0134445556665322 222345555555553222111
Q ss_pred ----hHHHHHHHHhcccCCCccCCCcchhHHHHHHHHHHHH-hHHHH------HhhHHHHHhhhCCCChhH-HhHHHHHH
Q psy8182 704 ----LVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAH-GAEYV------IPAMEELLLNLEKESYLM-RNCTLTIV 771 (827)
Q Consensus 704 ----l~~eilreI~~~~~~d~~~Ds~g~K~~s~FL~~Lae~-~P~lv------l~~~s~L~~~Ld~Esy~l-R~aVlev~ 771 (827)
.+.-+++=+. +.+..+-++.+.=|..|+.. .|..+ ..-+..|+.+|++++-.+ +...+.++
T Consensus 533 v~~Gaip~Lv~LL~-------s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL 605 (810)
T 3now_A 533 VQEGGVKALLRMAL-------EGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMAL 605 (810)
T ss_dssp HHTTHHHHHHHHHH-------SSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHc-------cCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 1111111121 12344556666667777653 35543 334778888898764433 34556677
Q ss_pred HHHHHHhhccCCCChHH--HHHHHHHHHHHHHhcCcCChhhhhHHHHHHHHhhcC
Q psy8182 772 TELLINVYKREDLSDEA--KEQRDEYLNVLLDHMHDVHTFVRTKVSTEKKLECWQ 824 (827)
Q Consensus 772 g~ii~~~l~~~~~~e~~--k~~rd~~ld~L~er~~D~nayVRsKvlq~~~~lc~~ 824 (827)
+|+... +++. +-...+.++.|++-+.+.|+-||..+..++..++..
T Consensus 606 ~NLa~~-------~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~ 653 (810)
T 3now_A 606 TNLASM-------NESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMS 653 (810)
T ss_dssp HHHTTS-------CHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTS
T ss_pred HHHhcC-------CHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCC
Confidence 777642 2332 223456788888888889999999999998888753
No 78
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=65.46 E-value=1e+02 Score=37.92 Aligned_cols=58 Identities=10% Similarity=0.013 Sum_probs=43.8
Q ss_pred cccchhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 379 HDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 379 ~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
.+.+++||..|--.+.-+|-.+.- ..++..-..=+.|....||++|+.-|+.+...++
T Consensus 622 ~~~d~~VR~gAalALGli~aGn~~-----~~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig~gtn 679 (963)
T 4ady_A 622 KSHNAHVRCGTAFALGIACAGKGL-----QSAIDVLDPLTKDPVDFVRQAAMIALSMILIQQT 679 (963)
T ss_dssp GCSCHHHHHHHHHHHHHHTSSSCC-----HHHHHHHHHHHTCSSHHHHHHHHHHHHHHSTTCC
T ss_pred hcCCHHHHHHHHHHHHHhccCCCc-----HHHHHHHHHHccCCCHHHHHHHHHHHHHHhcCCc
Confidence 468999999999999988875432 2333433334689999999999999998876544
No 79
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=64.22 E-value=15 Score=37.87 Aligned_cols=82 Identities=11% Similarity=0.204 Sum_probs=66.9
Q ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHHHhC--CCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCCCCC
Q psy8182 368 DEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLD--KAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFAAK 445 (827)
Q Consensus 368 d~ll~~L~er~~D~n~~vRskvLq~~~~L~~~--~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf~~~ 445 (827)
+.-+..|.+=.+|.++-|+.+||+++.++... +..-.....+++...++=+.++.-=|-=+|+..|..+|++.|
T Consensus 32 e~~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vp---- 107 (265)
T 3b2a_A 32 KRALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVP---- 107 (265)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCC----
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCC----
Confidence 44678888888999999999999999999987 434444456788888888889988888899999999999998
Q ss_pred CChhHHHH
Q psy8182 446 ATTQYYVQ 453 (827)
Q Consensus 446 L~~~~~v~ 453 (827)
|+.+.+++
T Consensus 108 L~~~~y~K 115 (265)
T 3b2a_A 108 MGSKTFLK 115 (265)
T ss_dssp BCHHHHHH
T ss_pred CCHHHHHH
Confidence 45555543
No 80
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=62.62 E-value=1.8e+02 Score=31.78 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=82.5
Q ss_pred hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHH--HHHHHHHHHhhcc-cchhHHHHHHHHHHHHHh
Q psy8182 322 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQR--DEYLNVLLDHMHD-VHTFVRTKVLQLFQRLVL 398 (827)
Q Consensus 322 ~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~r--d~ll~~L~er~~D-~n~~vRskvLq~~~~L~~ 398 (827)
.-+..|..+|.++.-.+|...+.+++++.... +..+... .+.+..|.+.+.+ .++.+|..+...+.+|+.
T Consensus 17 ~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~-------~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~ 89 (529)
T 1jdh_A 17 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-------ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH 89 (529)
T ss_dssp CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSH-------HHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCC-------ccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 34677888888999999999999999886321 1111111 3567777777754 489999999999999987
Q ss_pred CCCCChHHH--HHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 399 DKAIPVAFT--LKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 399 ~~~iP~~~~--~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
... +.... .+.+...++-|.+....||+.|+..|..+...++
T Consensus 90 ~~~-~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~ 133 (529)
T 1jdh_A 90 HRE-GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQE 133 (529)
T ss_dssp SHH-HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCT
T ss_pred Cch-hHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCc
Confidence 522 11111 2466677888999999999999999999988766
No 81
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=59.48 E-value=2.2e+02 Score=31.75 Aligned_cols=131 Identities=12% Similarity=0.064 Sum_probs=90.1
Q ss_pred hhhHHHHHHHHHHHHh---H--HHHHhhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHH--HHHHHHHH
Q psy8182 301 SSKMIAAFLNEVAAHG---A--EYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKE--QRDEYLNV 373 (827)
Q Consensus 301 g~k~~s~FL~~Lae~~---P--~l~l~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~--~rd~ll~~ 373 (827)
..++.+..|..++... | ..+-.-+..|..+|.++...+|...+.+++++... .++... ...+.+..
T Consensus 225 ~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~-------~~~~~~~v~~~g~i~~ 297 (529)
T 3tpo_A 225 YLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDG-------PNERIEMVVKKGVVPQ 297 (529)
T ss_dssp HHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSS-------CHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhh-------hhhhHHHHHhccchHH
Confidence 3567777777776532 1 12233466788889999988988888888876631 122111 23456778
Q ss_pred HHHhhcccchhHHHHHHHHHHHHHhCCCCChHHH-----HHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 374 LLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFT-----LKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 374 L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~-----~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
|.+-+.+.++.|+..++.++..|+... + ... .+++...+.-|.+.+..||+.|...|+.+...+|
T Consensus 298 Lv~lL~~~~~~v~~~a~~aL~nl~~~~--~-~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~ 367 (529)
T 3tpo_A 298 LVKLLGATELPIVTPALRAIGNIVTGT--D-EQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQ 367 (529)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHHTTSC--H-HHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHccc--h-HHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccH
Confidence 888888999999999999999998642 1 111 1233344556788889999999999998876655
No 82
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=59.36 E-value=59 Score=36.41 Aligned_cols=140 Identities=14% Similarity=0.139 Sum_probs=94.4
Q ss_pred CchhhhHHHHHHHHHHHHh----HHHH--HhhHHHHHHhhcCCCc----hHHHHHHHHHHHHHHHHhhcCCCchHHHHH-
Q psy8182 298 GQDSSKMIAAFLNEVAAHG----AEYV--IPAMEELLLNLEKESY----LMRNCTLTIVTELLINVYKREDLSDEAKEQ- 366 (827)
Q Consensus 298 D~~g~k~~s~FL~~Lae~~----P~l~--l~~is~l~~~Ld~esy----~lR~avle~~g~ii~~~~~~~~~~~~~~~~- 366 (827)
+....++...-|-.||... +.++ -.-+..|+.+|.+.+- .++.....++.++-..+..+ ++....-
T Consensus 300 ~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~---~~~~~~i~ 376 (458)
T 3nmz_A 300 KESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATN---EDHRQILR 376 (458)
T ss_dssp SHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTC---HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCC---HHHHHHHH
Confidence 4455666667777777633 3443 2347778888876543 36665666666654321111 1222222
Q ss_pred HHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCCC
Q psy8182 367 RDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPF 442 (827)
Q Consensus 367 rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nPf 442 (827)
..+.+..|.+.+.+-+.-++..|.-++..|+..+ |..+ ..+.+...+.-|..++..||++|...|..|..+||-
T Consensus 377 ~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~--~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~~p~ 454 (458)
T 3nmz_A 377 ENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARN--PKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPA 454 (458)
T ss_dssp HTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSC--HHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTCCSC
T ss_pred HcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCC--HHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHh
Confidence 2467888999998889999999999999999532 3222 235566777788999999999999999999999983
No 83
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=59.13 E-value=57 Score=35.10 Aligned_cols=139 Identities=14% Similarity=0.154 Sum_probs=93.3
Q ss_pred CchhhhHHHHHHHHHHHHh----HHHH--HhhHHHHHHhhcCCCc----hHHHHHHHHHHHHHHHHhhcCCCchHHHH-H
Q psy8182 298 GQDSSKMIAAFLNEVAAHG----AEYV--IPAMEELLLNLEKESY----LMRNCTLTIVTELLINVYKREDLSDEAKE-Q 366 (827)
Q Consensus 298 D~~g~k~~s~FL~~Lae~~----P~l~--l~~is~l~~~Ld~esy----~lR~avle~~g~ii~~~~~~~~~~~~~~~-~ 366 (827)
+....++...-|-.||... +.++ -.-+..|+.+|.+.+- .++.....++.++-..+. + +++.++ -
T Consensus 184 ~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a-~---~~~~~~~i 259 (354)
T 3nmw_A 184 KESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIA-T---NEDHRQIL 259 (354)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHT-T---CHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhcc-C---CHHHHHHH
Confidence 3445556666666666532 3443 2347778888876543 366666666666643221 1 122222 2
Q ss_pred -HHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHH----HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 367 -RDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAF----TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 367 -rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~----~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
..+.+..|.+.+.+-+.-++..|.-++..|+..+ |..+ ..+.+..-+.-|.+++..+|++|...|..|..++|
T Consensus 260 ~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~--~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~~~~~ 337 (354)
T 3nmw_A 260 RENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARN--PKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRP 337 (354)
T ss_dssp HTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSC--HHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCC--HHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCH
Confidence 2457888999888889999999999999998532 2222 13456677788899999999999999999999988
Q ss_pred C
Q psy8182 442 F 442 (827)
Q Consensus 442 f 442 (827)
-
T Consensus 338 ~ 338 (354)
T 3nmw_A 338 A 338 (354)
T ss_dssp G
T ss_pred H
Confidence 4
No 84
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=58.20 E-value=8.5 Score=36.30 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=30.6
Q ss_pred HHHHHHHHHhcCcCChhhhhHHHHHHHHhhcCC
Q psy8182 793 DEYLNVLLDHMHDVHTFVRTKVSTEKKLECWQP 825 (827)
Q Consensus 793 d~~ld~L~er~~D~nayVRsKvlq~~~~lc~~~ 825 (827)
+...+.|..|+.|.+++|.-|+|+++..||.+-
T Consensus 48 ~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~G 80 (140)
T 1vdy_A 48 KEFSEFILKRLDNKSPIVKQKALRLIKYAVGKS 80 (140)
T ss_dssp HHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHhcCCCcceeehHHHHHHHHHHhC
Confidence 678999999999999999999999999999754
No 85
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=57.56 E-value=3e+02 Score=33.10 Aligned_cols=110 Identities=16% Similarity=0.170 Sum_probs=75.1
Q ss_pred hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhC---
Q psy8182 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLD--- 399 (827)
Q Consensus 323 ~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~--- 399 (827)
-+..|++++.++.-..+...++++|++-.. .+..+.-++.-...|..-....++.+|..|+-.+.++...
T Consensus 291 ~v~~li~Ll~s~~~~~q~~A~~al~~aa~~-------~~~R~~I~~~gv~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~~ 363 (810)
T 3now_A 291 ILQMILAMATTDDELQQRVACECLIAASSK-------KDKAKALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGQ 363 (810)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHTTS-------HHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTTTT
T ss_pred hHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-------cHHHHHHHHcCcHHHHHHHcCCCHHHHHHHHHHHHHhcccccc
Confidence 367888999999999999999999984322 1122222223346777766678899999999999999742
Q ss_pred -CC-CCh--HHHHHHHHHHHhhcCCC--ChHHHHHHHHHHHHHHhh
Q psy8182 400 -KA-IPV--AFTLKLLERAIGRLMDK--SSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 400 -~~-iP~--~~~~~v~~~av~RL~DK--Ss~VRk~Ai~Ll~~ll~~ 439 (827)
.. .+. .-...++...++-|.+. ..-||++|+-.|.-+-..
T Consensus 364 d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~ 409 (810)
T 3now_A 364 DAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLD 409 (810)
T ss_dssp TTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTS
T ss_pred CccccchhhccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCC
Confidence 12 222 22345666666666655 678999999999876443
No 86
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=46.12 E-value=3.5e+02 Score=30.02 Aligned_cols=135 Identities=15% Similarity=0.159 Sum_probs=87.1
Q ss_pred CchhhhHHHHHHHHHHHHhHH---HHHhh--HHHHHHhhcCCCch------HHHHHHHHHHHHHHHHhhcCCCchHHHHH
Q psy8182 298 GQDSSKMIAAFLNEVAAHGAE---YVIPA--MEELLLNLEKESYL------MRNCTLTIVTELLINVYKREDLSDEAKEQ 366 (827)
Q Consensus 298 D~~g~k~~s~FL~~Lae~~P~---l~l~~--is~l~~~Ld~esy~------lR~avle~~g~ii~~~~~~~~~~~~~~~~ 366 (827)
+.......+.-|..+|...|. .+..+ +..|+.+|.+.... +|++ ..+++++. .+..... ....
T Consensus 156 ~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a-~~~L~nl~----~~~~~~~-~~~~ 229 (510)
T 3ul1_B 156 HAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNL-TWTLSNLC----RNKNPAP-PLDA 229 (510)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHH-HHHHHHHH----CCCSSCC-CHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHH-HHHHHHHh----hcccchh-HHHH
Confidence 444555566667777755443 34333 77788888765432 3332 23333332 2221111 1223
Q ss_pred HHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHH-----HHHHHHHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 367 RDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFT-----LKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 367 rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~-----~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
...++..|..-+.+.++.||..|..++..|++. +..+. .+++...+.-|.+.+..|+..|+..|..+...++
T Consensus 230 ~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~---~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~ 306 (510)
T 3ul1_B 230 VEQILPTLVRLLHHNDPEVLADSCWAISYLTDG---PNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD 306 (510)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSS---CHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhc---hhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCH
Confidence 456788888888899999999999999999986 33332 2355667778899999999999999998765543
No 87
>1h2v_C 80 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14 a.118.1.14 PDB: 1n52_A* 1n54_A 3fex_A 3fey_A 1h6k_A 1h2t_C* 1h2u_A*
Probab=44.39 E-value=73 Score=38.20 Aligned_cols=130 Identities=11% Similarity=0.086 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHhhCc-chhhHHHHHHHHhhhcccchHHHHHHHHHHHhcCC
Q psy8182 623 EFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNH-GISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGC 701 (827)
Q Consensus 623 ~Fi~l~~~~~y~lLE~~~~~~~K~~~ir~~if~il~~~vk~y~h-~~~~~~~IiqlL~~~Ehl~~~~Ae~v~~l~~~~~~ 701 (827)
+..+-+...+.++=|... .+++..+.++.+.+....-+ --.+...++++.....|=.+..|-+|.++..+.
T Consensus 7 ~~~~~l~~lI~rlge~~~------~s~~~~l~~L~~~l~~~l~~~r~~i~~~l~~~~~~~P~Kt~vyAaLVgllN~k~-- 78 (771)
T 1h2v_C 7 ETEDHLESLICKVGEKSA------CSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARN-- 78 (771)
T ss_dssp ---CHHHHHHHTTTSSCS------SCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTC--
T ss_pred cHHHHHHHHHHHhCCCCC------ccHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCcchHHHHHHHHHHcCC--
Confidence 333444444455555443 23445555555554444322 234677788888888888888999999888775
Q ss_pred cchHHHHHHHHhcc---cCCCccCCCcchhHHHHHHHHHHH---HhHHHHHhhHHHHHhhhCCCChh
Q psy8182 702 KSLVREIVREISAM---EDGNENAGQDSSKMIAAFLNEVAA---HGAEYVIPAMEELLLNLEKESYL 762 (827)
Q Consensus 702 ~~l~~eilreI~~~---~~~d~~~Ds~g~K~~s~FL~~Lae---~~P~lvl~~~s~L~~~Ld~Esy~ 762 (827)
+.++++|+..+... ... ++|-...|..-+||..|.- ..|..+++-+..|+.....++.+
T Consensus 79 pe~G~~lv~~l~~~f~~~l~--~~~~~~~k~~lrFLa~L~n~~Vv~~~~il~lL~~Ll~~~~e~~~~ 143 (771)
T 1h2v_C 79 YNFGGEFVEAMIRQLKESLK--ANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVP 143 (771)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHTTSBCHHHHHHHHHHHHHGGGCSSCC
T ss_pred hhHHHHHHHHHHHHHHHHHH--ccChHHHHHHHHHHHHhccCCeecHHHHHHHHHHHHHhhhhcCCc
Confidence 78899999888653 333 4688899999999999988 48999999999999988777654
No 88
>3rk6_A Polyadenylate-binding protein-interacting protein; heat fold, PABP, EIF4A, EIF3, translation regulator; 2.00A {Homo sapiens}
Probab=39.92 E-value=2.3e+02 Score=28.63 Aligned_cols=127 Identities=12% Similarity=0.124 Sum_probs=68.6
Q ss_pred hcccchHHHHHHHHHHHhcCC---c-chHHHHHHHHhcccCCCc----cCCCc---chhHHHHHHHHHHHH---------
Q psy8182 681 CEHLVSPLAQAVVMFIRNHGC---K-SLVREIVREISAMEDGNE----NAGQD---SSKMIAAFLNEVAAH--------- 740 (827)
Q Consensus 681 ~Ehl~~~~Ae~v~~l~~~~~~---~-~l~~eilreI~~~~~~d~----~~Ds~---g~K~~s~FL~~Lae~--------- 740 (827)
-.|-+.--|.++..+.++.+. . .+-.-+|.. |+.+|..- ..|.. ---++-.|+-+|=..
T Consensus 72 ep~fs~~YA~LC~~l~~~l~~~~~~~~Fr~lLL~r-cQ~eFe~~~~~~~~d~~~k~r~lg~i~FIgELf~~l~~~~~~~~ 150 (234)
T 3rk6_A 72 IPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQR-CRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQ 150 (234)
T ss_dssp STTCHHHHHHHHHHHHHHCCCCCTTCCHHHHHHHH-HHHHHTTHHHHTSSCHHHHHHHHHHHHHHHHHHHHCCEECTTSS
T ss_pred CcccHHHHHHHHHHHHHhcCCCCchhHHHHHHHHH-HHHHHHhhHHhhhccHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 345556667777777765421 1 233333433 66666531 11211 112456788888765
Q ss_pred --hHHHHHhhHHHHHhh----hCCCChhHHhHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHhcC--cCChhhhh
Q psy8182 741 --GAEYVIPAMEELLLN----LEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMH--DVHTFVRT 812 (827)
Q Consensus 741 --~P~lvl~~~s~L~~~----Ld~Esy~lR~aVlev~g~ii~~~l~~~~~~e~~k~~rd~~ld~L~er~~--D~nayVRs 812 (827)
..++|...+-.|+.. -+.|+---=|.++..+|..+-+..+ +..+...|.+|+.|.+=.+ ++++=+|-
T Consensus 151 ~l~e~I~~~ci~~Ll~~l~~~p~ee~vE~l~~lL~tvG~~Ld~~~~-----~~~~~~md~~f~rl~~i~~~~~ls~Rirf 225 (234)
T 3rk6_A 151 VTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWK-----EKGKMDMEEIIQRIENVVLDANCSRDVKQ 225 (234)
T ss_dssp EECCHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHH-----HTTCCHHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred hhHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHhhcch-----hhhHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 234555555444443 3556666667778888888765421 1233466777777776544 34444444
Q ss_pred H
Q psy8182 813 K 813 (827)
Q Consensus 813 K 813 (827)
.
T Consensus 226 m 226 (234)
T 3rk6_A 226 M 226 (234)
T ss_dssp H
T ss_pred H
Confidence 3
No 89
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=35.16 E-value=2.3e+02 Score=33.10 Aligned_cols=71 Identities=10% Similarity=0.170 Sum_probs=53.6
Q ss_pred hHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHH-HHhhcccchhHHHHHHHHHHHHHhC
Q psy8182 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVL-LDHMHDVHTFVRTKVLQLFQRLVLD 399 (827)
Q Consensus 323 ~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L-~er~~D~n~~vRskvLq~~~~L~~~ 399 (827)
.+--+++.|.+.+-..|.+.+.++++|+... +....-.+.+.+..+ ...+.|-+.=||..|..++..||..
T Consensus 35 ~i~Pll~~L~S~~~~~r~~A~~al~~l~~~~------~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~ 106 (684)
T 4gmo_A 35 KILPVLKDLKSPDAKSRTTAAGAIANIVQDA------KCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQE 106 (684)
T ss_dssp TTHHHHHHHSSSCCSHHHHHHHHHHHHTTSH------HHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCCHHHHHHHHHHHHHHHcCc------HHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhh
Confidence 3445677799999999999999999998321 122233455666554 4558999999999999999999875
No 90
>1q87_A 39 kDa initiator binding protein; INR, core promoter, DNA binding protein; 2.32A {Trichomonas vaginalis} SCOP: e.47.1.1 PDB: 1q88_A 1q89_A
Probab=33.05 E-value=32 Score=34.14 Aligned_cols=51 Identities=18% Similarity=0.270 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHh
Q psy8182 386 RTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIE 438 (827)
Q Consensus 386 RskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~ 438 (827)
|..|++.|.+|++..++-. +...+...|..|..- +.+--|||+++|+.+|.
T Consensus 36 k~~vi~iW~eiv~~~~i~~-~~~~fI~~aa~~F~~-~~Q~l~NA~~vI~~IL~ 86 (221)
T 1q87_A 36 RAKVDEIWFRLTQKTDGTV-MRDFLIEKAAEYFKQ-PEQPKQNAIEVISAIMA 86 (221)
T ss_dssp HHHHHHHHHHHHSSSSSEE-EHHHHHHHHHHHHSC-TTSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhccccccc-cHHHHHHHHHHHHhc-cchhhhhHHHHHHHHhc
Confidence 7899999999999876632 346677888888766 56677899999988775
No 91
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=32.79 E-value=4.8e+02 Score=32.16 Aligned_cols=76 Identities=11% Similarity=0.124 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHhhc-ccchhHHHHHHHHHHHHHhCCCCCh--HHHHHHHHHHHhhcCCCC-hHHHHHHHHHHHHHHhhC
Q psy8182 365 EQRDEYLNVLLDHMH-DVHTFVRTKVLQLFQRLVLDKAIPV--AFTLKLLERAIGRLMDKS-SNVVKYTVQLLKTMIESN 440 (827)
Q Consensus 365 ~~rd~ll~~L~er~~-D~n~~vRskvLq~~~~L~~~~~iP~--~~~~~v~~~av~RL~DKS-s~VRk~Ai~Ll~~ll~~n 440 (827)
...+.+++.|.+=.. +.|= +|..+|..+.-+.=.+...+ ..+..+.+.++.-|.|.- .-||..|-..|+.+|.+.
T Consensus 797 ~~~~~~l~~l~~~~~~s~sW-~R~~~L~~lq~~~f~n~f~l~~~~~~~i~~~v~~~L~D~q~~EVRe~Aa~tLsgll~c~ 875 (997)
T 1vsy_5 797 NHVAAIVDYVCSSNVALSSN-QTKLQLAFIQHFLSAELLQLTEEEKNKILEFVVSNLYNEQFVEVRVRAASILSDIVHNW 875 (997)
T ss_dssp HHHHHHHHHSSCTTTTSCSS-SHHHHHHHHHHHHHHHTTTSCTTHHHHTHHHHTTTTTCSSCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHcC
Confidence 456778888844333 2344 99999999888887665443 334689999999999999 999999999999999887
Q ss_pred -C
Q psy8182 441 -P 441 (827)
Q Consensus 441 -P 441 (827)
|
T Consensus 876 ~~ 877 (997)
T 1vsy_5 876 KE 877 (997)
T ss_dssp CS
T ss_pred Cc
Confidence 6
No 92
>1h2v_C 80 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14 a.118.1.14 PDB: 1n52_A* 1n54_A 3fex_A 3fey_A 1h6k_A 1h2t_C* 1h2u_A*
Probab=31.77 E-value=1.6e+02 Score=35.30 Aligned_cols=113 Identities=10% Similarity=0.078 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHhcc-ccchhhhHHHHhhhcccccHHHHHHHHHHHHhhCCCchHHHHHHHHhccccCCC-cCCch
Q psy8182 223 ELRVFIFQIVGYLIKRYNH-GISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNE-NAGQD 300 (827)
Q Consensus 223 ~~r~~if~il~~~vk~~~~-~~~~~~~IiqlL~~~ehl~~~~Ae~v~~l~~~~~~~~l~~~ilreI~~~~~~d~-~~D~~ 300 (827)
+++..+.++.+.+...... ...+...+++......|=.+..|.+|..+..+ .+.+++++++.+...-...+ .+|-.
T Consensus 26 s~~~~l~~L~~~l~~~l~~~r~~i~~~l~~~~~~~P~Kt~vyAaLVgllN~k--~pe~G~~lv~~l~~~f~~~l~~~~~~ 103 (771)
T 1h2v_C 26 SLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNAR--NYNFGGEFVEAMIRQLKESLKANNYN 103 (771)
T ss_dssp CHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCcchHHHHHHHHHHcC--ChhHHHHHHHHHHHHHHHHHHccChH
Confidence 3444444444443333221 22355667777777788788888888888764 36788888887754322211 35778
Q ss_pred hhhHHHHHHHHHHH---HhHHHHHhhHHHHHHhhcCCCch
Q psy8182 301 SSKMIAAFLNEVAA---HGAEYVIPAMEELLLNLEKESYL 337 (827)
Q Consensus 301 g~k~~s~FL~~Lae---~~P~l~l~~is~l~~~Ld~esy~ 337 (827)
..|..-.||..|.- ..|..+++-+..|+.....++..
T Consensus 104 ~~k~~lrFLa~L~n~~Vv~~~~il~lL~~Ll~~~~e~~~~ 143 (771)
T 1h2v_C 104 EAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVP 143 (771)
T ss_dssp HHHHHHHHHHHHHHTTSBCHHHHHHHHHHHHHGGGCSSCC
T ss_pred HHHHHHHHHHHhccCCeecHHHHHHHHHHHHHhhhhcCCc
Confidence 89999999999988 47888998899998887766644
No 93
>2pjw_V Vacuolar protein sorting-associated protein 27; GAT domain, core complex, doamin SWAP, endocytosis/exocytosis complex; 3.01A {Saccharomyces cerevisiae}
Probab=30.35 E-value=1.1e+02 Score=26.63 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=57.9
Q ss_pred CCChhhHHHHHHHHHHHHHHhccccc--------c--ccchHHHHHHHHHHHHHHHHhhCcchhhHHHHHHHHhhhcccc
Q psy8182 616 DPPVVEEEFVNMVANCCYKIIEDPCI--------A--SVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLV 685 (827)
Q Consensus 616 ~~~~~ee~Fi~l~~~~~y~lLE~~~~--------~--~~K~~~ir~~if~il~~~vk~y~h~~~~~~~IiqlL~~~Ehl~ 685 (827)
.-++.|++=|.+|...+.++-..|+. + +-|..++|-.+-+.|+-.+.+|+--.....+|.+....|+.+=
T Consensus 2 dLt~~e~d~I~lF~~lv~~~k~~~~~~i~~d~~LqeLy~kv~~lRPKL~r~l~~~~~K~~~L~~mn~Kls~a~rlYD~lL 81 (91)
T 2pjw_V 2 DLSDEEKDSIYMFASLVEKMKSRPLNEILEDSKLQNLAQRVFASKARLNYALNDKAQKYNTLIEMNGKISEIMNIYDRLL 81 (91)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCSCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHhCCcccccCCHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678888899999999887666553 2 4466778889999999999999998999999999999998765
Q ss_pred h
Q psy8182 686 S 686 (827)
Q Consensus 686 ~ 686 (827)
+
T Consensus 82 E 82 (91)
T 2pjw_V 82 E 82 (91)
T ss_dssp H
T ss_pred H
Confidence 4
No 94
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=30.34 E-value=2.6e+02 Score=31.07 Aligned_cols=129 Identities=15% Similarity=0.147 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHh---HHHH--Hhh-HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHH-HHHHHHHH
Q psy8182 303 KMIAAFLNEVAAHG---AEYV--IPA-MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQR-DEYLNVLL 375 (827)
Q Consensus 303 k~~s~FL~~Lae~~---P~l~--l~~-is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~r-d~ll~~L~ 375 (827)
++.+.-|..|+... +..+ ... |..|+.+|.+++..+|...+.++++|-. + +.+++...-+ .+-+..|.
T Consensus 218 ~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~----~-~~~~~k~~I~~~GaI~~LV 292 (458)
T 3nmz_A 218 RYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSW----R-ADVNSKKTLREVGSVKALM 292 (458)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTS----S-CCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhc----C-CCHHHHHHHHHcCCHHHHH
Confidence 44445555555322 1223 233 8889999999999999999999998732 1 1112222212 24556666
Q ss_pred Hhhc-ccchhHHHHHHHHHHHHHh-C--CCCChHHHHHHHHHHHhhcCCCCh----HHHHHHHHHHHHH
Q psy8182 376 DHMH-DVHTFVRTKVLQLFQRLVL-D--KAIPVAFTLKLLERAIGRLMDKSS----NVVKYTVQLLKTM 436 (827)
Q Consensus 376 er~~-D~n~~vRskvLq~~~~L~~-~--~~iP~~~~~~v~~~av~RL~DKSs----~VRk~Ai~Ll~~l 436 (827)
+-+. ..+.-++..|+.++..|+. . +...+....+.+...+.-|.+.+. .|+++|...|..+
T Consensus 293 ~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nL 361 (458)
T 3nmz_A 293 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNV 361 (458)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHH
Confidence 6543 3467788888888888876 2 111111012344555555555443 3677776666554
No 95
>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A*
Probab=28.73 E-value=5e+02 Score=26.71 Aligned_cols=70 Identities=17% Similarity=0.203 Sum_probs=51.3
Q ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHH----HHHhhcCCCC--------hHHHHHHHHHHHH
Q psy8182 368 DEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLE----RAIGRLMDKS--------SNVVKYTVQLLKT 435 (827)
Q Consensus 368 d~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~----~av~RL~DKS--------s~VRk~Ai~Ll~~ 435 (827)
..++..|..|+.|.|.-|=-|+|-++.+|...|. | .....+.+ ...++..|++ +.||+.|-=|..+
T Consensus 64 ~~~~~~L~~Rl~~~~w~v~~KaLivlH~llreG~-~-~~l~~~~~~~~~~~Ls~f~d~~~~~~~~~s~~Ir~Ya~yL~eR 141 (271)
T 3zyl_A 64 PQLADSLFERTTNSSWVVVFKSLITTHHLMVYGN-E-RFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEK 141 (271)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSC-H-HHHHHHHHCSCCCCCTTCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHHHHhcCC-H-HHHHHHHhCCCeechhccCCCCCCCcccccHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999875 4 22222211 1233455664 5599999999988
Q ss_pred HHhh
Q psy8182 436 MIES 439 (827)
Q Consensus 436 ll~~ 439 (827)
+...
T Consensus 142 l~~f 145 (271)
T 3zyl_A 142 AVSY 145 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7644
No 96
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=27.97 E-value=2.1e+02 Score=30.64 Aligned_cols=108 Identities=16% Similarity=0.154 Sum_probs=63.1
Q ss_pred HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHH-HHHHHHHHHHhh-cccchhHHHHHHHHHHHHHhCC-
Q psy8182 324 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQ-RDEYLNVLLDHM-HDVHTFVRTKVLQLFQRLVLDK- 400 (827)
Q Consensus 324 is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~-rd~ll~~L~er~-~D~n~~vRskvLq~~~~L~~~~- 400 (827)
+..|+.+|.+++-.+|...+.+++++-. ++ .+++...- ..+-+..|.+-+ ...++-++..|+.++..|....
T Consensus 129 Ip~LV~LL~s~~~~v~~~A~~aL~nLs~----~~-~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~ 203 (354)
T 3nmw_A 129 MRALVAQLKSESEDLQQVIASVLRNLSW----RA-DVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCT 203 (354)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHHT----TC-CHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHhc----cC-CHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccCh
Confidence 7788999999999999999999998842 11 11221111 123444455443 2245677888888887777621
Q ss_pred --CCChHHHHHHHHHHHhhcCCCCh----HHHHHHHHHHHHH
Q psy8182 401 --AIPVAFTLKLLERAIGRLMDKSS----NVVKYTVQLLKTM 436 (827)
Q Consensus 401 --~iP~~~~~~v~~~av~RL~DKSs----~VRk~Ai~Ll~~l 436 (827)
........+.+...+.-|.+.+. .|+++|...|..+
T Consensus 204 ~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nL 245 (354)
T 3nmw_A 204 ENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNV 245 (354)
T ss_dssp HHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHH
T ss_pred hhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHH
Confidence 11111112445555566665543 3777777766654
No 97
>2pjw_V Vacuolar protein sorting-associated protein 27; GAT domain, core complex, doamin SWAP, endocytosis/exocytosis complex; 3.01A {Saccharomyces cerevisiae}
Probab=27.61 E-value=68 Score=27.86 Aligned_cols=70 Identities=16% Similarity=0.140 Sum_probs=56.5
Q ss_pred CCcchhHHHHHHHHHHHHHhccccc----------cccccHHHHHHHHHHHHHHHHHhccccchhhhHHHHhhhcccccH
Q psy8182 192 PPVVEEEFVNMVANCCYKIIEDPCI----------ASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVS 261 (827)
Q Consensus 192 ~~~~ee~Fi~l~~~~~~~lLE~~~~----------~~~K~~~~r~~if~il~~~vk~~~~~~~~~~~IiqlL~~~ehl~~ 261 (827)
-++.|++=|.+|...+-++-..|+. .+-|..++|-.+-+.|+..+.+|+.-.....+|.+....|+.+=+
T Consensus 3 Lt~~e~d~I~lF~~lv~~~k~~~~~~i~~d~~LqeLy~kv~~lRPKL~r~l~~~~~K~~~L~~mn~Kls~a~rlYD~lLE 82 (91)
T 2pjw_V 3 LSDEEKDSIYMFASLVEKMKSRPLNEILEDSKLQNLAQRVFASKARLNYALNDKAQKYNTLIEMNGKISEIMNIYDRLLE 82 (91)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHhCCcccccCCHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888899999888887665543 255778889999999999999999888888899998888887643
No 98
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=27.54 E-value=9.3e+02 Score=29.48 Aligned_cols=293 Identities=13% Similarity=0.167 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHhcchhhcccCCCcchhHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHH-HHhccccchhhhH
Q psy8182 171 LSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLI-KRYNHGISCTVKI 249 (827)
Q Consensus 171 r~~~L~~l~~~L~l~l~~lw~~~~~ee~Fi~l~~~~~~~lLE~~~~~~~K~~~~r~~if~il~~~v-k~~~~~~~~~~~I 249 (827)
.+.+++.+.=+.+-.-.-+.. ...-++| +..|--+|.+|+.+ |+..+|..+.++|-... -.++...+.-..+
T Consensus 538 iEdi~d~~~F~~r~~p~~l~~-~~~l~~~----v~f~i~fl~s~~~I--kNP~LraklvevL~~~~~P~~~~~~g~~~~~ 610 (968)
T 3m62_A 538 VEGPVNYSLYISKYQTSPIFR-NPRLGSF----VEFTTMVLRCPELV--SNPHLKGKLVQLLSVGAMPLTDNSPGFMMDI 610 (968)
T ss_dssp HHHHHHHHHHHTTCTTCTTTT-CTTHHHH----HHHHHHHHHCTTSC--CCHHHHHHHHHHHHHHHSCCTTSCCCTTHHH
T ss_pred HHhHHHHHHHHHHcCCCcccc-ccchhHH----HHHHHHHhCCcccc--CCHHHHHHHHHHHHhcccccccCCccHHHHH
Confidence 677777766665543222222 2244444 44577888999855 99999999999997643 2222223332223
Q ss_pred HHHhhhcccccHHHHHHHHHHHH-------------hhCCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHh
Q psy8182 250 VQLLKNCEHLVSPLAQAVVMFIR-------------NHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHG 316 (827)
Q Consensus 250 iqlL~~~ehl~~~~Ae~v~~l~~-------------~~~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~ 316 (827)
+ ...+-.-.++...+..+.- +|++..=+..|++.+-+.. ..+-.=|.+.|+..
T Consensus 611 f---~~~~la~~~L~~aLm~fYvdvE~TG~~~qFYdKFn~R~~I~~Ilk~LW~~~-----------~~yr~~l~~~a~~~ 676 (968)
T 3m62_A 611 F---EHDELVNKNLLYALLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKI-----------PSYKNQLIWQSQNN 676 (968)
T ss_dssp H---HHCHHHHHHHHHHHHHHHHHGGGCCSCCSSSCHHHHHHHHHHHHHHHHHHC-----------HHHHHHHHHHHHHC
T ss_pred H---hcCHHHHHHHHHHHHHHHhhhhccCCcchHHHhhhhHHHHHHHHHHHHhcC-----------HHHHHHHHHHHHhC
Confidence 2 2222222233333333331 2223334667777765311 12233345566667
Q ss_pred HHHHHhhHHHHHHhhcCCCchHHHHHHHHHHHH--HHHHhhcCC-----CchHHHHHHHHHHHHHHHhhcccchhHHHHH
Q psy8182 317 AEYVIPAMEELLLNLEKESYLMRNCTLTIVTEL--LINVYKRED-----LSDEAKEQRDEYLNVLLDHMHDVHTFVRTKV 389 (827)
Q Consensus 317 P~l~l~~is~l~~~Ld~esy~lR~avle~~g~i--i~~~~~~~~-----~~~~~~~~rd~ll~~L~er~~D~n~~vRskv 389 (827)
|..+++=+..|+.- -.|.|=-|+ +.+.+| +.....+.. ..++.++.+++.+...+-...-.....+. .
T Consensus 677 ~~~FvrFvNlLiND---~tyLLDEsL-~~L~~I~~~Q~e~~~~~~~~~~~~ee~~~~~~~~l~~~er~a~s~~~La~e-t 751 (968)
T 3m62_A 677 ADFFVRFVARMLND---LTFLLDEGL-SNLAEVHNIQNELDNRARGAPPTREEEDKELQTRLASASRQAKSSCGLADK-S 751 (968)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHH-HHHHHHHHHHHHHHTSSCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred cHHHHHHHHHHHHH---HHHHHHHHH-HHHHHHHHHHHHHhhhhccCCccchhHHHHHHHHHHHHHhhhHHHHHhHHH-H
Confidence 77777666655542 223332221 222222 111121111 11223445555555554443333333333 5
Q ss_pred HHHHHHHHhCCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHH---HHHHHhhCCCCCCCChhHHHHhhhhhhhhhhhH-
Q psy8182 390 LQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQL---LKTMIESNPFAAKATTQYYVQAELTLEEFNERI- 465 (827)
Q Consensus 390 Lq~~~~L~~~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~L---l~~ll~~nPf~~~L~~~~~v~ev~~l~ei~~~L- 465 (827)
+.++.-+.+. +|..+.. ...++|| |--| |..|. -|=..+|....-.+---.++++-..|
T Consensus 752 v~ml~~~T~~--i~~~F~~---peiv~Rl----------A~MLnynL~~Lv--GPk~~~LKVknpekY~F~Pk~lL~~i~ 814 (968)
T 3m62_A 752 MKLFEIYSKD--IPAAFVT---PEIVYRL----------ASMLNYNLESLV--GPKCGELKVKDPQSYSFNPKDLLKALT 814 (968)
T ss_dssp HHHHHHHHHH--CGGGGCS---HHHHHHH----------HHHHHHHHHHHH--SHHHHTCCCSCGGGGTCCHHHHHHHHH
T ss_pred HHHHHHHHHH--hchhhcc---HHHHHHH----------HHHHHHHHHHhc--CccccccccCCHhhcCCCHHHHHHHHH
Confidence 6666666654 4554421 1112222 1111 11111 12223455444455555555555555
Q ss_pred ---------hhhhhhcCCCCchhhhhhhhhHHHhhhcc-ccccHHHHHHHH
Q psy8182 466 ---------KDCFEALDNDGPMFILENFDTLYSMLTHF-KSIEYKILHNVY 506 (827)
Q Consensus 466 ---------~e~~~Al~~e~~~~i~e~FD~lySll~~~-~~l~~~~~~~l~ 506 (827)
+++..|+..++..+-++.|+....++..- +-.++....++.
T Consensus 815 ~IYlnL~~~~~F~~aVa~DgRSy~~elF~~a~~il~~~~~l~~~~~i~~~~ 865 (968)
T 3m62_A 815 TVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLL 865 (968)
T ss_dssp HHHHHTTTCHHHHHHHHHCTTTCCHHHHHHHHHHHTTSTTSSCHHHHHHHH
T ss_pred HHHhhccCChHHHHHHHhcCCCCCHHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 45667777777777899999999998544 445666655555
No 99
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=27.20 E-value=2.6e+02 Score=32.25 Aligned_cols=111 Identities=11% Similarity=0.070 Sum_probs=78.3
Q ss_pred hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccc--------chhHHHHHHHHH
Q psy8182 322 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDV--------HTFVRTKVLQLF 393 (827)
Q Consensus 322 ~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~--------n~~vRskvLq~~ 393 (827)
.-+..|+.+|.+++-.++.+.+.+++||-.. .+ ++..-..+.+-.|.+.+.+- +.=++..|+.++
T Consensus 355 ~glp~Lv~LL~s~~~~v~~~A~~aL~nLs~~----~~---~~~~I~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL 427 (584)
T 3l6x_A 355 KALSAIADLLTNEHERVVKAASGALRNLAVD----AR---NKELIGKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTI 427 (584)
T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHHTT----CS---CHHHHHHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHcCCCHHHHHHHHHHHHHHhCC----hh---HHHHHHhCCHHHHHHHhcCCcccccccchHHHHHHHHHHH
Confidence 3488899999999999999999999998652 11 22222456777777776554 345678899999
Q ss_pred HHHHhCCCCChHHH----HHHHHHHHhhcCCC--ChHHHHHHHHHHHHHHhhCC
Q psy8182 394 QRLVLDKAIPVAFT----LKLLERAIGRLMDK--SSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 394 ~~L~~~~~iP~~~~----~~v~~~av~RL~DK--Ss~VRk~Ai~Ll~~ll~~nP 441 (827)
..|+..+ |.... .+.+...+.=|.++ +..++|.|-++|..+..+..
T Consensus 428 ~NL~a~~--~~~~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl~~~~e 479 (584)
T 3l6x_A 428 NEVIAEN--LEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKE 479 (584)
T ss_dssp HHHHTTC--HHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHTSHH
T ss_pred HHHhcCC--HHHHHHHHHCCChHHHHHHHhCCCCChHHHHHHHHHHHHHHcCHH
Confidence 8888543 32221 23455566667777 88999999999998876433
No 100
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=26.86 E-value=8.6e+02 Score=28.88 Aligned_cols=219 Identities=14% Similarity=0.163 Sum_probs=113.1
Q ss_pred HHHHHhccccccccccHHHHHHHHHHHHHHHHHhcccc------chhhhHHHHhhhccc----ccHHHHHHHHHHHHhh-
Q psy8182 206 CCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGI------SCTVKIVQLLKNCEH----LVSPLAQAVVMFIRNH- 274 (827)
Q Consensus 206 ~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~~------~~~~~IiqlL~~~eh----l~~~~Ae~v~~l~~~~- 274 (827)
.|..+|.+. .+..+|.....++...|+++-+.+ .....|++.+..+.. +-.-++..+..+...+
T Consensus 61 ~~~~lL~~~-----~~~~vr~~aa~~L~~~i~~~w~~l~~~~~~~ir~~ll~~l~~~~~~~~~ir~kl~~~la~i~~~~~ 135 (963)
T 2x19_B 61 FSWQLLQPD-----KVPEIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMM 135 (963)
T ss_dssp HHHHHTSTT-----SCHHHHHHHHHHHHHHHHHCGGGSCGGGHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCC-----CchHHHHHHHHHHHHHHHhCHHhCCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhC
Confidence 455666543 356777777777777777643332 234567777665321 2234556666665542
Q ss_pred --CCCchHHHHHHHHhccccCCCcCCchhhhHHHHHHHHHHHHh-------------HHHHHhhHHH----HHHhhcCC-
Q psy8182 275 --GCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHG-------------AEYVIPAMEE----LLLNLEKE- 334 (827)
Q Consensus 275 --~~~~l~~~ilreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~-------------P~l~l~~is~----l~~~Ld~e- 334 (827)
+-+.++.+++.-+.. ..+. ..+.......-.||..++|-. ...+..++.. +...+...
T Consensus 136 p~~Wp~~l~~l~~~~~~-~~~~-~~~~~~~~~~l~iL~~l~ee~~~~~~~~~~r~~~~~~l~~~~~~i~~ll~~~l~~~~ 213 (963)
T 2x19_B 136 PDAWPCAVADMVRLFQA-EDSP-VDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVECGAVFPLLEQLLQQPS 213 (963)
T ss_dssp TTTSTTHHHHHHHHHCC--------CHHHHHHHHHHHHHHHHHHTTCCC---------CCSGGGHHHHHHHHHHHHSCTT
T ss_pred ccccchHHHHHHHHHhh-hccC-CCcHHHHHHHHHHHHhCHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 345777777765432 1110 012334556667777777532 1112222332 33333322
Q ss_pred Cc-hHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCCh--HHHHHHH
Q psy8182 335 SY-LMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPV--AFTLKLL 411 (827)
Q Consensus 335 sy-~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~--~~~~~v~ 411 (827)
+- .++.+++++++..+. . +.... ....+++.+..-+ + ++-+|..|+.++..++....-|. .....++
T Consensus 214 ~~~~~~~~~l~~l~~wi~--~-~~~~~-----~~~~ll~~l~~~l-~-~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~l~ 283 (963)
T 2x19_B 214 SPSCVRQKVLKCFSSWVQ--L-EVPLQ-----DCEALIQAAFAAL-Q-DSELFDSSVEAIVNAISQPDAQRYVNTLLKLI 283 (963)
T ss_dssp CCHHHHHHHHHHHHHHHT--S-SCCGG-----GTHHHHHHHHHHT-T-STTTHHHHHHHHHHHHTCTTGGGCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHc--C-CCCcc-----cchHHHHHHHHHh-C-CchHHHHHHHHHHHHHcccccccCHHHHHHHH
Confidence 11 388888888876543 1 11111 1133444444222 2 57789999999999998543221 1222222
Q ss_pred HHHHh-------hcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 412 ERAIG-------RLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 412 ~~av~-------RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
....+ .+.++..-+.++-..++..+.+.+|
T Consensus 284 ~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~ 320 (963)
T 2x19_B 284 PLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHS 320 (963)
T ss_dssp HHHHTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhH
Confidence 22221 1222233566777788888888765
No 101
>3rk6_A Polyadenylate-binding protein-interacting protein; heat fold, PABP, EIF4A, EIF3, translation regulator; 2.00A {Homo sapiens}
Probab=25.72 E-value=4.7e+02 Score=26.19 Aligned_cols=116 Identities=13% Similarity=0.168 Sum_probs=53.8
Q ss_pred ccccHHHHHHHHHHHHhhCC---C-chHHHHHHHHhccccCCC----cCCchh---hhHHHHHHHHHHHH----------
Q psy8182 257 EHLVSPLAQAVVMFIRNHGC---K-SLVREIVREISAMEDGNE----NAGQDS---SKMIAAFLNEVAAH---------- 315 (827)
Q Consensus 257 ehl~~~~Ae~v~~l~~~~~~---~-~l~~~ilreI~~~~~~d~----~~D~~g---~k~~s~FL~~Lae~---------- 315 (827)
.|-++.-|.++..+.++.+. + .+-.-+|.. |+.+|..- ..|... .-+.-.|+.+|=..
T Consensus 73 p~fs~~YA~LC~~l~~~l~~~~~~~~Fr~lLL~r-cQ~eFe~~~~~~~~d~~~k~r~lg~i~FIgELf~~l~~~~~~~~~ 151 (234)
T 3rk6_A 73 PNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQR-CRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQV 151 (234)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCCTTCCHHHHHHHH-HHHHHTTHHHHTSSCHHHHHHHHHHHHHHHHHHHHCCEECTTSSE
T ss_pred cccHHHHHHHHHHHHHhcCCCCchhHHHHHHHHH-HHHHHHhhHHhhhccHHHHHHHHHHHHHHHHHHhhhcccccccch
Confidence 34455556666666664421 1 233333433 66666531 112111 22456788887765
Q ss_pred -hHHHHHhhHHHHHHhh-c---CCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhh
Q psy8182 316 -GAEYVIPAMEELLLNL-E---KESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHM 378 (827)
Q Consensus 316 -~P~l~l~~is~l~~~L-d---~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~ 378 (827)
..++|...+-.|+..+ + .++-..=|.++..+|..+....+ +..+..-|.+|+.|.+=.
T Consensus 152 l~e~I~~~ci~~Ll~~l~~~p~ee~vE~l~~lL~tvG~~Ld~~~~-----~~~~~~md~~f~rl~~i~ 214 (234)
T 3rk6_A 152 TRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWK-----EKGKMDMEEIIQRIENVV 214 (234)
T ss_dssp ECCHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHH-----HTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHhhcch-----hhhHHHHHHHHHHHHHHH
Confidence 1234444455444442 2 23333333445555555543211 112234566666666543
No 102
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=25.39 E-value=1.1e+03 Score=29.47 Aligned_cols=73 Identities=7% Similarity=0.101 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHhHHHHHhhHHHHHhhhCC-------CChhHHhHHHHHHHHHHHHhhccCCCChHHHHH-HHHHHHHH
Q psy8182 728 KMIAAFLNEVAAHGAEYVIPAMEELLLNLEK-------ESYLMRNCTLTIVTELLINVYKREDLSDEAKEQ-RDEYLNVL 799 (827)
Q Consensus 728 K~~s~FL~~Lae~~P~lvl~~~s~L~~~Ld~-------Esy~lR~aVlev~g~ii~~~l~~~~~~e~~k~~-rd~~ld~L 799 (827)
+..+.=|..|++.+|..+++.+..|...+.. -+-.=|+.+.++++-+ . +.-.+++.+.. .+.|++-+
T Consensus 602 ~~a~~al~~L~~~~~~~L~p~~~~i~~~~~~~l~~~~~l~~~e~~~L~eal~~i----a-~~~~~~~~~~~~l~~ll~P~ 676 (1204)
T 3a6p_A 602 RHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEKCALMEALVLI----S-NQFKNYERQKVFLEELMAPV 676 (1204)
T ss_dssp HHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHH----H-GGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhCcccccHHHHHHHHHHHHHH----h-ccCCCHHHHHHHHHHHHHHH
Confidence 3445567799999999999999987775432 2345566677777655 1 11012333333 78888888
Q ss_pred HHhcCc
Q psy8182 800 LDHMHD 805 (827)
Q Consensus 800 ~er~~D 805 (827)
.++..+
T Consensus 677 ~~~w~~ 682 (1204)
T 3a6p_A 677 ASIWLS 682 (1204)
T ss_dssp HHHHSC
T ss_pred HHHHcc
Confidence 877764
No 103
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=25.01 E-value=2.1e+02 Score=25.96 Aligned_cols=53 Identities=15% Similarity=0.119 Sum_probs=25.8
Q ss_pred HHHHHHHHhhcccch-hHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCC
Q psy8182 369 EYLNVLLDHMHDVHT-FVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDK 421 (827)
Q Consensus 369 ~ll~~L~er~~D~n~-~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DK 421 (827)
.+........+|.+. -.|-.+.+.+..|+..+.++..-..+=.....+.|.|-
T Consensus 41 e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~is~~q~~~Gf~~v~~~l~Dl 94 (129)
T 2nsz_A 41 ELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNEIPDI 94 (129)
T ss_dssp HHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHhhChHh
Confidence 344444444455442 45555555555555555555544444444444444443
No 104
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=24.84 E-value=9.3e+02 Score=29.64 Aligned_cols=176 Identities=14% Similarity=0.234 Sum_probs=102.4
Q ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHhccc-cchhhhHHHHhhhcccccHHHHHHHHHHHHhhCCCchHHHH
Q psy8182 205 NCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHG-ISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREI 283 (827)
Q Consensus 205 ~~~~~lLE~~~~~~~K~~~~r~~if~il~~~vk~~~~~-~~~~~~IiqlL~~~ehl~~~~Ae~v~~l~~~~~~~~l~~~i 283 (827)
+.++.+++++.+. ++..++..++=.+|.+|.+|-.. ..|...+ ..++++.+....++.+
T Consensus 394 ~~~~~l~~~~~~~--~~~~l~~ta~La~gslV~k~c~~~~~c~~~~----------v~~i~~~l~~~~~~~~-------- 453 (1056)
T 1lsh_A 394 SYARELLNTSFIR--NRPILRKTAVLGYGSLVFRYCANTVSCPDEL----------LQPLHDLLSQSSDRAK-------- 453 (1056)
T ss_dssp HHHHHHHTCHHHH--TCHHHHHHHHHHHHHHHHHHHTTCSSCCGGG----------THHHHHHHHHHHHTTC--------
T ss_pred HHHHHHHhCcccc--cCHHHHHHHHHHHHHHHHHHhccCCCCCHHH----------HHHHHHHHHHHHhcCC--------
Confidence 3467788888654 77889999999999999986432 2233222 2233333222222211
Q ss_pred HHHHhccccCCCcCCchhhhHHHHHHHHHHHHhHHHHHhhHHHHHHhhcC-----CC--chHHHHHHHHHHHHHHHHhhc
Q psy8182 284 VREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEK-----ES--YLMRNCTLTIVTELLINVYKR 356 (827)
Q Consensus 284 lreI~~~~~~d~~~D~~g~k~~s~FL~~Lae~~P~l~l~~is~l~~~Ld~-----es--y~lR~avle~~g~ii~~~~~~ 356 (827)
....-.+|..|...--- ..+..|.+++.+ ++ -.+|-+.+.++-.+-.
T Consensus 454 ------------------~~~~~~~LkaLGN~g~p---~~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~----- 507 (1056)
T 1lsh_A 454 ------------------EEEIVLALKALGNAGQP---NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAK----- 507 (1056)
T ss_dssp ------------------HHHHHHHHHHHHHHTCG---GGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGG-----
T ss_pred ------------------hHHHHHHHHHhhccCCh---hHHHHHHHhhcCccccccccchHHHHHHHHHHHHhhh-----
Confidence 11222333333332211 234566777643 23 3466777766654431
Q ss_pred CCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHhhcCCCChHHHHHHHHHHHH
Q psy8182 357 EDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIP-VAFTLKLLERAIGRLMDKSSNVVKYTVQLLKT 435 (827)
Q Consensus 357 ~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP-~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ 435 (827)
..-++.|+-++.+..++- ..+=+|..|+.++.+- . | ......++... -.|++..|+.-...-|..
T Consensus 508 ----~~p~~v~~il~~i~~n~~--e~~EvRiaA~~~Lm~t--~---P~~~~l~~ia~~l---~~E~~~QV~sfv~S~l~s 573 (1056)
T 1lsh_A 508 ----RDPRKVQEIVLPIFLNVA--IKSELRIRSCIVFFES--K---PSVALVSMVAVRL---RREPNLQVASFVYSQMRS 573 (1056)
T ss_dssp ----TCHHHHHHHHHHHHHCTT--SCHHHHHHHHHHHHHT--C---CCHHHHHHHHHHH---TTCSCHHHHHHHHHHHHH
T ss_pred ----hchHHHHHHHHHHhcCCC--CChHHHHHHHHHHHHH--C---cCHHHHHHHHHHH---hhCchHHHHHHHHHHHHH
Confidence 123457777888877765 5678899999886432 2 4 33444444333 377999999999999998
Q ss_pred HHhhC
Q psy8182 436 MIESN 440 (827)
Q Consensus 436 ll~~n 440 (827)
+....
T Consensus 574 la~s~ 578 (1056)
T 1lsh_A 574 LSRSS 578 (1056)
T ss_dssp HTTCC
T ss_pred HHhcC
Confidence 87753
No 105
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=24.57 E-value=1.7e+02 Score=32.19 Aligned_cols=108 Identities=10% Similarity=0.087 Sum_probs=76.8
Q ss_pred HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHH-HHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCC
Q psy8182 324 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEA-KEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAI 402 (827)
Q Consensus 324 is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~-~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~i 402 (827)
+..|+.+|.+++..+|.....+++++.. ++ ++.. .-...+.+..|.+-+..-++-++..|..++..|+..+
T Consensus 4 l~~lv~~L~s~~~~~q~~A~~~L~~l~~----~~--~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~-- 75 (457)
T 1xm9_A 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCF----QD--ESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-- 75 (457)
T ss_dssp HHHHHHHHHSSCTHHHHHHHHHHHHHTS----SC--SSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSC--
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHc----CC--hHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCC--
Confidence 5567888999999999999999988641 11 1111 2234566777777777788999999999999998642
Q ss_pred ChHH----HHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHhh
Q psy8182 403 PVAF----TLKLLERAIGRLM-DKSSNVVKYTVQLLKTMIES 439 (827)
Q Consensus 403 P~~~----~~~v~~~av~RL~-DKSs~VRk~Ai~Ll~~ll~~ 439 (827)
|-.+ ..+.+...+.-|. +.+..|+++|...|..+-..
T Consensus 76 ~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~ 117 (457)
T 1xm9_A 76 TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 117 (457)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC
Confidence 2222 1234556667777 67789999999999987654
No 106
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=24.40 E-value=2.2e+02 Score=34.15 Aligned_cols=137 Identities=13% Similarity=0.174 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHh-------HHHHHhh---HHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhc-CCCchHHHHHH-HHHH
Q psy8182 304 MIAAFLNEVAAHG-------AEYVIPA---MEELLLNLEKESYLMRNCTLTIVTELLINVYKR-EDLSDEAKEQR-DEYL 371 (827)
Q Consensus 304 ~~s~FL~~Lae~~-------P~l~l~~---is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~-~~~~~~~~~~r-d~ll 371 (827)
+-..=|..||... .+.++++ +..|..+|.+++-.+|.|.+++++|++...-.- .+.-+.. ..+ .+=+
T Consensus 578 eAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~-~~~~~~rL 656 (778)
T 3opb_A 578 EALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMSHPLTIAAKFFNLE-NPQSLRNF 656 (778)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHTSGGGTGGGTSCCS-SHHHHHHH
T ss_pred HHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCcHHHHHHHHhhc-CchhhccH
Confidence 4444556666642 3445664 899999999999999999999999999643210 0110000 011 1124
Q ss_pred HHHHHhhcccchhHHHHHHHHHHHHHh-CCCCC--hHHHHHHHHHHHhhcCC--CChHHHHHHHHHHHHHHhhCC
Q psy8182 372 NVLLDHMHDVHTFVRTKVLQLFQRLVL-DKAIP--VAFTLKLLERAIGRLMD--KSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 372 ~~L~er~~D~n~~vRskvLq~~~~L~~-~~~iP--~~~~~~v~~~av~RL~D--KSs~VRk~Ai~Ll~~ll~~nP 441 (827)
+.|..=...-+.=+|..|.-++..+.. ...+- +-...+.++..++-|+| ...-+|.+++.++..+.+.-|
T Consensus 657 ~lLV~Ll~s~D~~~r~AAagALAnLts~~~~ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~NL~~~~~ 731 (778)
T 3opb_A 657 NILVKLLQLSDVESQRAVAAIFANIATTIPLIAKELLTKKELIENAIQVFADQIDDIELRQRLLMLFFGLFEVIP 731 (778)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHHHHCHHHHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhcCCChHHHHHHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhhc
Confidence 444444455778899999999888864 31111 11123577778888888 889999999999999998555
No 107
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=23.68 E-value=2.2e+02 Score=26.76 Aligned_cols=53 Identities=15% Similarity=0.118 Sum_probs=26.0
Q ss_pred HHHHHHHHhhccc-chhHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhcCCC
Q psy8182 369 EYLNVLLDHMHDV-HTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDK 421 (827)
Q Consensus 369 ~ll~~L~er~~D~-n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~~av~RL~DK 421 (827)
.+........+|. |.-.|-.+.+++..|+..+.|+..-..+=.....+.|.|-
T Consensus 43 e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is~~q~~~Gf~~vl~~ldDl 96 (152)
T 2ion_A 43 ELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERIYNEIPDI 96 (152)
T ss_dssp HHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHhChHh
Confidence 3444444444444 2445555555555555555555544444444444444443
No 108
>1vsy_5 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_6
Probab=22.92 E-value=1.8e+02 Score=35.92 Aligned_cols=104 Identities=18% Similarity=0.270 Sum_probs=69.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHhCCCCChHHHHHHH
Q psy8182 333 KESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVH-TFVRTKVLQLFQRLVLDKAIPVAFTLKLL 411 (827)
Q Consensus 333 ~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n-~~vRskvLq~~~~L~~~~~iP~~~~~~v~ 411 (827)
+.|. -|.+++..+--++-.-+-- .+. .+++.+++.+...+.|.+ .=||-.|-+++.-|+.-.+ |......++
T Consensus 813 s~sW-~R~~~L~~lq~~~f~n~f~--l~~---~~~~~i~~~v~~~L~D~q~~EVRe~Aa~tLsgll~c~~-~~~~~~~li 885 (997)
T 1vsy_5 813 LSSN-QTKLQLAFIQHFLSAELLQ--LTE---EEKNKILEFVVSNLYNEQFVEVRVRAASILSDIVHNWK-EEQPLLSLI 885 (997)
T ss_dssp SCSS-SHHHHHHHHHHHHHHHTTT--SCT---THHHHTHHHHTTTTTCSSCHHHHHHHHHHHHHHHHSCC-SHHHHHHHH
T ss_pred CCcH-HHHHHHHHHHHHHHHHHHH--cCH---HHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHcCC-chhhHHHHH
Confidence 4678 9999988865554332110 111 255789999999999999 9999999999999975421 433333444
Q ss_pred HHHHhhc-C-----------CCChHHHHHHHHHHHHHHhhCCCC
Q psy8182 412 ERAIGRL-M-----------DKSSNVVKYTVQLLKTMIESNPFA 443 (827)
Q Consensus 412 ~~av~RL-~-----------DKSs~VRk~Ai~Ll~~ll~~nPf~ 443 (827)
..-..|+ + +|+...|=.|+-=|++++...||.
T Consensus 886 ~~f~~~~~~~~~~~~~~~~~~~~~~~rH~aVLgL~AlV~a~Py~ 929 (997)
T 1vsy_5 886 ERFAKGLDVNKYTSKERQKLSKTDIKIHGNVLGLGAIISAFPYV 929 (997)
T ss_dssp HHHTTSSTTTSSCHHHHHHHHHHCHHHHHHHHHHHHHHTTCSCC
T ss_pred HHHHHHHhhcccccccccccchHHHHHHHHHHHHHHHHhhCCCC
Confidence 4434444 1 233345566777799999999984
No 109
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=22.81 E-value=42 Score=32.43 Aligned_cols=68 Identities=3% Similarity=-0.021 Sum_probs=0.0
Q ss_pred HHHHHHHHh-CCCCChHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHhh--CCCCCCCChhHHHHhhhhh
Q psy8182 390 LQLFQRLVL-DKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES--NPFAAKATTQYYVQAELTL 458 (827)
Q Consensus 390 Lq~~~~L~~-~~~iP~~~~~~v~~~av~RL~DKSs~VRk~Ai~Ll~~ll~~--nPf~~~L~~~~~v~ev~~l 458 (827)
......||+ -+.-|..- ...++....||..+++.|.-.|+.||-.++.| .||..++...+|.++..++
T Consensus 31 w~~ileicD~I~~~~~~~-k~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl 101 (171)
T 1juq_A 31 WEYIIGFCDQINKELEGP-QIAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKV 101 (171)
T ss_dssp HHHHHHHHHHHHHSTTHH-HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHH
No 110
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=21.81 E-value=6.5e+02 Score=26.89 Aligned_cols=197 Identities=13% Similarity=0.156 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHH-----HHHHHhccccchhhhHHHHhhhcccccHHHHHHHHHHHHhhCCCchHHHHHHHHhccccCCC
Q psy8182 221 HKELRVFIFQIVG-----YLIKRYNHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNE 295 (827)
Q Consensus 221 ~~~~r~~if~il~-----~~vk~~~~~~~~~~~IiqlL~~~ehl~~~~Ae~v~~l~~~~~~~~l~~~ilreI~~~~~~d~ 295 (827)
.+.+|+.+-.+=. ...+++....+-...-|..+-+=+.=++|..|.+..++++.-...+...++.-+...+|.
T Consensus 16 Vr~l~d~l~~l~~~~~~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l~~L~fE-- 93 (341)
T 1upk_A 16 VKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFE-- 93 (341)
T ss_dssp HHHHHHHHHHHHC---CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHSHHHHHHHTGGGSCHH--
T ss_pred HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhCHHHHHHHhcccCCch--
Q ss_pred cCCchhhhHHHHHHHHHHHHhHH-------HHHhhHHHHHHhhcC-CCch--------HHHHH-HHHHHHHHHHHhhcCC
Q psy8182 296 NAGQDSSKMIAAFLNEVAAHGAE-------YVIPAMEELLLNLEK-ESYL--------MRNCT-LTIVTELLINVYKRED 358 (827)
Q Consensus 296 ~~D~~g~k~~s~FL~~Lae~~P~-------l~l~~is~l~~~Ld~-esy~--------lR~av-le~~g~ii~~~~~~~~ 358 (827)
+-|.++..+..+-.+.+. .+..+-..|.-++.+ |.-. +|-|+ -|.++.+|..
T Consensus 94 -----~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G~mLRecir~e~la~~iL~------ 162 (341)
T 1upk_A 94 -----GKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILW------ 162 (341)
T ss_dssp -----HHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHHHHHHH------
T ss_pred -----hhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHHHHHHHHHHhHHHHHHHhc------
Q ss_pred CchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHH-----HHHHHHHHHhhcCCCChHHHHHHHHHH
Q psy8182 359 LSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAF-----TLKLLERAIGRLMDKSSNVVKYTVQLL 433 (827)
Q Consensus 359 ~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~-----~~~v~~~av~RL~DKSs~VRk~Ai~Ll 433 (827)
+..|..+.+.+.--|-=|=|-|..++..|...+.-.... +..+...--.=|+-.+...||.+++||
T Consensus 163 ---------~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKLL 233 (341)
T 1upk_A 163 ---------SEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLL 233 (341)
T ss_dssp ---------SGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred ---------cHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHHH
Q ss_pred HHHHhh
Q psy8182 434 KTMIES 439 (827)
Q Consensus 434 ~~ll~~ 439 (827)
+.+|..
T Consensus 234 gelLld 239 (341)
T 1upk_A 234 GELLLD 239 (341)
T ss_dssp HHHHHS
T ss_pred HHHHhC
No 111
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=21.62 E-value=4.4e+02 Score=28.76 Aligned_cols=108 Identities=8% Similarity=0.054 Sum_probs=73.4
Q ss_pred hhHHHHHHhhcCCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccch------hHHHHHHHHHHH
Q psy8182 322 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHT------FVRTKVLQLFQR 395 (827)
Q Consensus 322 ~~is~l~~~Ld~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~------~vRskvLq~~~~ 395 (827)
.-+..|+.+|.+.+..+|...+.+++++-. + ++....-..+.+..|.+-+...++ -+-..++.++..
T Consensus 331 ~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~----~---~~~~~~i~~~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~n 403 (457)
T 1xm9_A 331 KGLPQIARLLQSGNSDVVRSGASLLSNMSR----H---PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRN 403 (457)
T ss_dssp CCHHHHHHHTTCSCHHHHHHHHHHHHHHHT----S---GGGHHHHHHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHhCCCHhHHHHHHHHHHHHhc----C---HHHHHHHHHhhhHHHHHhccCCCCCCCCcHHHHHHHHHHHHH
Confidence 347889999999999999999999998853 1 122222234566667776665433 466678888888
Q ss_pred HHhCCCCChHHH----HHHHHHHHhhcCCC-ChHHHHHHHHHHHHHHh
Q psy8182 396 LVLDKAIPVAFT----LKLLERAIGRLMDK-SSNVVKYTVQLLKTMIE 438 (827)
Q Consensus 396 L~~~~~iP~~~~----~~v~~~av~RL~DK-Ss~VRk~Ai~Ll~~ll~ 438 (827)
|+..+ |...+ .+.+...+.=+..+ +..|||.|..+|..+-.
T Consensus 404 i~~~~--~~~~~~i~~~g~l~~L~~L~~~~~~~~i~~~A~~~L~~~~~ 449 (457)
T 1xm9_A 404 LMASQ--PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 449 (457)
T ss_dssp HHTTC--THHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSS
T ss_pred HHhcC--HHHHHHHHHcCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHc
Confidence 87644 22111 24555555556677 88999999999986543
No 112
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=20.02 E-value=3.6e+02 Score=33.03 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=46.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhCCCCChHHHHHHHH
Q psy8182 333 KESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLE 412 (827)
Q Consensus 333 ~esy~lR~avle~~g~ii~~~~~~~~~~~~~~~~rd~ll~~L~er~~D~n~~vRskvLq~~~~L~~~~~iP~~~~~~v~~ 412 (827)
.++=.+|.+....+|.+. +..+ +.-+.+++.|.+ |.++++|.-+.-++.--+-.-.=+. -.++++.
T Consensus 519 ~~~e~vrR~aalgLGll~---~g~~-------e~~~~li~~L~~---~~dp~vRygaa~alglAyaGTGn~~-aIq~LL~ 584 (963)
T 4ady_A 519 TQHGNITRGLAVGLALIN---YGRQ-------ELADDLITKMLA---SDESLLRYGGAFTIALAYAGTGNNS-AVKRLLH 584 (963)
T ss_dssp CSCHHHHHHHHHHHHHHT---TTCG-------GGGHHHHHHHHH---CSCHHHHHHHHHHHHHHTTTSCCHH-HHHHHHH
T ss_pred cCcHHHHHHHHHHHHhhh---CCCh-------HHHHHHHHHHHh---CCCHHHHHHHHHHHHHHhcCCCCHH-HHHHHHH
Confidence 344456666666666442 1111 123444444443 5677777766555543333222222 2234444
Q ss_pred HHHhhcCCCChHHHHHHHHHHHHHHhhCC
Q psy8182 413 RAIGRLMDKSSNVVKYTVQLLKTMIESNP 441 (827)
Q Consensus 413 ~av~RL~DKSs~VRk~Ai~Ll~~ll~~nP 441 (827)
.++ .|.+..||+.|+-=|+-++-.+|
T Consensus 585 ~~~---~d~~d~VRraAViaLGlI~~g~~ 610 (963)
T 4ady_A 585 VAV---SDSNDDVRRAAVIALGFVLLRDY 610 (963)
T ss_dssp HHH---HCSCHHHHHHHHHHHHHHTSSSC
T ss_pred Hhc---cCCcHHHHHHHHHHHHhhccCCH
Confidence 444 35556677777666666555555
Done!