Your job contains 1 sequence.
>psy8182
MAGVLEFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFD
TLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMT
LWVFTEFIINFETRLQKDYHKIVIDAKARKVKVRAAIKHNEKMQWDWDFHLSNGLNSIHQ
ILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYN
HGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQD
SSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLS
DEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMD
KSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFI
LENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLN
VVKMTLWVFTEFIINFETRLQKDYHKIVIDAKARKVKVRAAIKHNEKMQWDWDFHLSNGL
NSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYL
IKRYNHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNE
NAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYK
REDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVSTEKKLECWQPNW
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8182
(827 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q15021 - symbol:NCAPD2 "Condensin complex subun... 662 1.5e-67 3
MGI|MGI:1915548 - symbol:Ncapd2 "non-SMC condensin I comp... 670 1.1e-66 2
ZFIN|ZDB-GENE-050506-59 - symbol:ncapd2 "non-SMC condensi... 678 1.1e-66 2
UNIPROTKB|F1N3G4 - symbol:NCAPD2 "Uncharacterized protein... 666 3.0e-66 2
RGD|1562596 - symbol:Ncapd2 "non-SMC condensin I complex,... 665 4.8e-66 2
UNIPROTKB|E2RHZ0 - symbol:NCAPD2 "Uncharacterized protein... 652 2.0e-64 2
UNIPROTKB|F1NEH3 - symbol:NCAPD2 "Condensin complex subun... 578 1.9e-55 2
UNIPROTKB|F1NH88 - symbol:NCAPD2 "Condensin complex subun... 578 2.7e-54 2
UNIPROTKB|F5GZJ1 - symbol:NCAPD2 "Condensin complex subun... 545 5.6e-50 3
FB|FBgn0039680 - symbol:CAP-D2 "CAP-D2 condensin subunit"... 542 9.3e-49 2
UNIPROTKB|E7EN77 - symbol:NCAPD2 "Condensin complex subun... 460 7.3e-48 3
ASPGD|ASPL0000038678 - symbol:AN3451 species:162425 "Emer... 302 1.1e-21 2
DICTYBASE|DDB_G0293984 - symbol:ncapD2 "non-SMC condensin... 158 1.6e-21 4
POMBASE|SPBC776.13 - symbol:cnd1 "condensin complex non-S... 256 4.0e-19 2
CGD|CAL0001793 - symbol:YCS4 species:5476 "Candida albica... 190 2.0e-09 2
UNIPROTKB|Q59U69 - symbol:YCS4 "Potential nuclear condens... 190 2.0e-09 2
UNIPROTKB|F5GZK7 - symbol:NCAPD2 "Condensin complex subun... 145 5.7e-09 1
SGD|S000004262 - symbol:YCS4 "Subunit of the condensin co... 156 1.0e-05 2
WB|WBGene00001087 - symbol:dpy-28 species:6239 "Caenorhab... 131 0.00024 1
>UNIPROTKB|Q15021 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9606
"Homo sapiens" [GO:0051301 "cell division" evidence=IEA]
[GO:0045120 "pronucleus" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IDA;NAS] [GO:0000797 "condensin
core heterodimer" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0042393 "histone binding" evidence=IDA;NAS] [GO:0000228
"nuclear chromosome" evidence=IDA] [GO:0000796 "condensin complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_115566 SUPFAM:SSF48371 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 EMBL:CH471116 GO:GO:0042393
GO:GO:0007076 GO:GO:0045120 EMBL:AC006064 EMBL:D63880 EMBL:BC028182
IPI:IPI00299524 RefSeq:NP_055680.3 UniGene:Hs.5719
ProteinModelPortal:Q15021 SMR:Q15021 IntAct:Q15021
MINT:MINT-3030640 STRING:Q15021 PhosphoSite:Q15021 DMDM:259016362
PaxDb:Q15021 PRIDE:Q15021 Ensembl:ENST00000315579 GeneID:9918
KEGG:hsa:9918 UCSC:uc001qoo.2 CTD:9918 GeneCards:GC12P006602
H-InvDB:HIX0201829 HGNC:HGNC:24305 HPA:CAB012423 HPA:HPA036947
HPA:HPA037363 neXtProt:NX_Q15021 PharmGKB:PA162397021
eggNOG:COG5098 HOGENOM:HOG000068001 HOVERGEN:HBG038048
InParanoid:Q15021 KO:K06677 OMA:TERQHRD PhylomeDB:Q15021
ChiTaRS:NCAPD2 GenomeRNAi:9918 NextBio:37412 ArrayExpress:Q15021
Bgee:Q15021 CleanEx:HS_NCAPD2 Genevestigator:Q15021 GO:GO:0000797
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922 Uniprot:Q15021
Length = 1401
Score = 662 (238.1 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 148/440 (33%), Positives = 244/440 (55%)
Query: 6 EFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM 65
EF +P S +ELL+ QY VQ L+++ +++ A GP+ +L++FDT+YS+
Sbjct: 7 EFHLPLSPEELLKSGGVNQYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYSI 66
Query: 66 LTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFT 125
L HF+SI+ + + + L++ + S L L +L + +LN +KM +
Sbjct: 67 LHHFRSIDPGLKEDTL-QFLIKVVSRHSQELPAILDDTTLSGSDRNAHLNALKMNCYALI 125
Query: 126 EFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSK 185
+ +FET + + H +DW+ L + Q+L+
Sbjct: 126 RLLESFET-MASQTNLVDLDLGGKGKKARTKAAHG----FDWEEERQPILQLLTQLLQLD 180
Query: 186 INKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISC 245
I LW+ ++EEEFV++V CCY+++E+P I K++ R I ++G + RYNH +S
Sbjct: 181 IRHLWNHSIIEEEFVSLVTGCCYRLLENPTINHQKNRPTREAITHLLGVALTRYNHMLSA 240
Query: 246 TVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMI 305
TVKI+Q+L++ EHL L AV ++ ++G KS+V EIVREI + +K
Sbjct: 241 TVKIIQMLQHFEHLAPVLVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPSGTKGF 300
Query: 306 AAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKE 365
AAFL E+A ++ +M LL +L+ E+Y+MRN L + E+++ V + L A++
Sbjct: 301 AAFLTELAERVPAILMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAAARD 360
Query: 366 QRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNV 425
RD++L+ L H HDV++FVR++VLQLF R+V KA+P+ ++ A+GRL DKS V
Sbjct: 361 TRDQFLDTLQAHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQAVVALAVGRLADKSVLV 420
Query: 426 VKYTVQLLKTMIESNPFAAK 445
K +QLL + + +NPF+ K
Sbjct: 421 CKNAIQLLASFLANNPFSCK 440
Score = 513 (185.6 bits), Expect = 6.4e-46, P = 6.4e-46
Identities = 116/366 (31%), Positives = 198/366 (54%)
Query: 449 QYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTK 508
QY VQ L+++ +++ A GP+ +L++FDT+YS+L HF+SI+ + + +
Sbjct: 25 QYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYSILHHFRSIDPGLKEDTL-Q 83
Query: 509 LLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXXX 568
L++ + S L L +L + +LN +KM + + +FET + +
Sbjct: 84 FLIKVVSRHSQELPAILDDTTLSGSDRNAHLNALKMNCYALIRLLESFET-MASQTNLVD 142
Query: 569 XXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMV 628
H +DW+ L + Q+L+ I LW+ ++EEEFV++V
Sbjct: 143 LDLGGKGKKARTKAAHG----FDWEEERQPILQLLTQLLQLDIRHLWNHSIIEEEFVSLV 198
Query: 629 ANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPL 688
CCY+++E+P I K++ R I ++G + RYNH +S TVKI+Q+L++ EHL L
Sbjct: 199 TGCCYRLLENPTINHQKNRPTREAITHLLGVALTRYNHMLSATVKIIQMLQHFEHLAPVL 258
Query: 689 AQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPA 748
AV ++ ++G KS+V EIVREI + +K AAFL E+A ++ +
Sbjct: 259 VAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPSGTKGFAAFLTELAERVPAILMSS 318
Query: 749 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHT 808
M LL +L+ E+Y+MRN L + E+++ V + L A++ RD++L+ L H HDV++
Sbjct: 319 MCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAAARDTRDQFLDTLQAHGHDVNS 378
Query: 809 FVRTKV 814
FVR++V
Sbjct: 379 FVRSRV 384
Score = 50 (22.7 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 596 LSNGLNSIHQILKSKINKLWDPPV-VEEE-FVNMVANCCYKIIEDPCIASVKHK 647
LS+ N+I+ +L I++L DP + VEEE F ++ I +D S+ K
Sbjct: 1156 LSHKGNAIYNLLPDIISRLSDPELGVEEEPFHTIMKQLLSYITKDKQTESLVEK 1209
Score = 42 (19.8 bits), Expect = 3.5e-65, Sum P(2) = 3.5e-65
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 607 LKSKINKLWDPPVVEEEFVNMVAN 630
LKS + +L P EEE +AN
Sbjct: 486 LKSTLQQLLQLPQGEEEIPEQIAN 509
Score = 38 (18.4 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 414 AIGRLMDKSSNVVKYTVQLLKTMIESNP 441
A+G+ S+ ++LL TM+E +P
Sbjct: 1040 ALGKFCMISATFCDSQLRLLFTMLEKSP 1067
>MGI|MGI:1915548 [details] [associations]
symbol:Ncapd2 "non-SMC condensin I complex, subunit D2"
species:10090 "Mus musculus" [GO:0000793 "condensed chromosome"
evidence=ISO;IDA] [GO:0000796 "condensin complex" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0042393
"histone binding" evidence=ISO] [GO:0045120 "pronucleus"
evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 MGI:MGI:1915548 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0000793
GO:GO:0007076 GO:GO:0000228 GO:GO:0045120 CTD:9918 eggNOG:COG5098
HOVERGEN:HBG038048 KO:K06677 InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 EMBL:AK129068 EMBL:BC006673 EMBL:BC008592
EMBL:BC025460 EMBL:BC026982 EMBL:BC029133 EMBL:AK011352
EMBL:AK019259 IPI:IPI00172226 IPI:IPI00275153 RefSeq:NP_666283.1
UniGene:Mm.257590 ProteinModelPortal:Q8K2Z4 STRING:Q8K2Z4
PhosphoSite:Q8K2Z4 PaxDb:Q8K2Z4 PRIDE:Q8K2Z4
Ensembl:ENSMUST00000043848 GeneID:68298 KEGG:mmu:68298
UCSC:uc009dtt.1 GeneTree:ENSGT00390000017108 OrthoDB:EOG4W6NV7
NextBio:326949 Bgee:Q8K2Z4 CleanEx:MM_NCAPD2 Genevestigator:Q8K2Z4
GermOnline:ENSMUSG00000038252 GO:GO:0000796 Uniprot:Q8K2Z4
Length = 1392
Score = 670 (240.9 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 157/447 (35%), Positives = 251/447 (56%)
Query: 6 EFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM 65
EF +P S +ELL+ QY V+ L ++ + +++ A GP+ ILE+FDT+YS+
Sbjct: 7 EFHLPLSPEELLKSGGVNQYVVREVLPVKHLSSQLRAFQSAFRAQGPLAILEHFDTVYSI 66
Query: 66 LTHFKSIEYKILHNVYT---KLLLRSLKEFSSILDNF-LSGDSLDEELQEKYLNVVKMTL 121
L HF+SIE + + K++ R +E SSILD+ LSG + +LN +KM
Sbjct: 67 LHHFRSIEPGLKEDTLEFLKKVVSRHSQELSSILDDAALSGSD-----RSAHLNALKMNC 121
Query: 122 WVFTEFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQI 181
+ + +FE + + +DW+ L + Q+
Sbjct: 122 YALIRLLESFENMTSQ-----TSLIDLDIGGKGKRARAKATLGFDWEEERQPVLQLLTQL 176
Query: 182 LKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNH 241
L+ I LW+ +EEEFV++V CCY+++E+P I+ K++ + I ++G + RYNH
Sbjct: 177 LQLDIRHLWNHSAIEEEFVSLVTGCCYRLLENPTISHQKNRSTKEAIAHLLGVALVRYNH 236
Query: 242 GISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISA---MEDGNENAG 298
+S TVKI+Q+L++ EHL L AV ++ ++G KS+V EIVREI E + AG
Sbjct: 237 MLSATVKIIQMLQHFEHLPPVLVTAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDTAG 296
Query: 299 QDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKRED 358
+K AAFL E+A ++ M LL +L+ E+Y+MRN L + E+++ V +
Sbjct: 297 ---AKGFAAFLTELAERIPAVLMANMCILLDHLDGENYMMRNAVLAAIAEMVLQVLNGDQ 353
Query: 359 LSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRL 418
L + A+E RD++L++L H HDV++FVR++VLQLF R+V KA+P+ ++ A+GRL
Sbjct: 354 LEESARETRDQFLDILQAHGHDVNSFVRSRVLQLFARIVQQKALPLTRFQAVVALAVGRL 413
Query: 419 MDKSSNVVKYTVQLLKTMIESNPFAAK 445
DKS V K +QLL + + +NPF+ K
Sbjct: 414 ADKSVLVCKNAIQLLASFLANNPFSCK 440
Score = 521 (188.5 bits), Expect = 7.9e-47, P = 7.9e-47
Identities = 125/373 (33%), Positives = 205/373 (54%)
Query: 449 QYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYT- 507
QY V+ L ++ + +++ A GP+ ILE+FDT+YS+L HF+SIE + +
Sbjct: 25 QYVVREVLPVKHLSSQLRAFQSAFRAQGPLAILEHFDTVYSILHHFRSIEPGLKEDTLEF 84
Query: 508 --KLLLRSLKEFSSILDNF-LSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDY 564
K++ R +E SSILD+ LSG + +LN +KM + + +FE +
Sbjct: 85 LKKVVSRHSQELSSILDDAALSGSD-----RSAHLNALKMNCYALIRLLESFENMTSQ-- 137
Query: 565 HXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEF 624
+ +DW+ L + Q+L+ I LW+ +EEEF
Sbjct: 138 ---TSLIDLDIGGKGKRARAKATLGFDWEEERQPVLQLLTQLLQLDIRHLWNHSAIEEEF 194
Query: 625 VNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHL 684
V++V CCY+++E+P I+ K++ + I ++G + RYNH +S TVKI+Q+L++ EHL
Sbjct: 195 VSLVTGCCYRLLENPTISHQKNRSTKEAIAHLLGVALVRYNHMLSATVKIIQMLQHFEHL 254
Query: 685 VSPLAQAVVMFIRNHGCKSLVREIVREISA---MEDGNENAGQDSSKMIAAFLNEVAAHG 741
L AV ++ ++G KS+V EIVREI E + AG +K AAFL E+A
Sbjct: 255 PPVLVTAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDTAG---AKGFAAFLTELAERI 311
Query: 742 AEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLD 801
++ M LL +L+ E+Y+MRN L + E+++ V + L + A+E RD++L++L
Sbjct: 312 PAVLMANMCILLDHLDGENYMMRNAVLAAIAEMVLQVLNGDQLEESARETRDQFLDILQA 371
Query: 802 HMHDVHTFVRTKV 814
H HDV++FVR++V
Sbjct: 372 HGHDVNSFVRSRV 384
Score = 48 (22.0 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 596 LSNGLNSIHQILKSKINKLWDPP--VVEEEFVNMVANCCYKIIEDPCIASVKHK 647
LS+ N+I+ +L I++L DP V EE F ++ I +D S+ K
Sbjct: 1146 LSHKGNAIYNLLPDIISRLSDPEGGVEEEPFHTIMKQLLSYITKDKQTESLVEK 1199
>ZFIN|ZDB-GENE-050506-59 [details] [associations]
symbol:ncapd2 "non-SMC condensin I complex, subunit
D2" species:7955 "Danio rerio" [GO:0007067 "mitosis" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IGI;IMP] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
ZFIN:ZDB-GENE-050506-59 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0000070
GO:GO:0007076 CTD:9918 eggNOG:COG5098 HOGENOM:HOG000068001
HOVERGEN:HBG038048 KO:K06677 InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 OrthoDB:EOG4W6NV7 EMBL:BC133123 IPI:IPI00933758
RefSeq:NP_001155974.1 UniGene:Dr.150361 STRING:A2RV05 GeneID:552978
KEGG:dre:552978 InParanoid:A2RV05 NextBio:20879901
ArrayExpress:A2RV05 Uniprot:A2RV05
Length = 1414
Score = 678 (243.7 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 155/481 (32%), Positives = 266/481 (55%)
Query: 6 EFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM 65
+F++P D+L++ A QY VQ L+ ++ I A+ + GP+ ILE+FDT YS+
Sbjct: 39 DFMVPVCLDDLVKSGAVNQYVVQDVLSAKQLPSHINSFKAAMRSQGPLCILEHFDTAYSV 98
Query: 66 LTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFT 125
L H ++++ + ++ +LL++ ++ S L L +L +++ LN VKM++++
Sbjct: 99 LKHCRTVDVAVKEDIL-ELLIQVVRGLSVSLPTLLMAGTLSAVDRKQQLNAVKMSVFL-- 155
Query: 126 EFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSK 185
+ L+ D + + +QWD + L + Q+L+
Sbjct: 156 --LCKLTEMLESDSNRETIVTAPSKGRKKDKAAGKDLLQWDSE--RDTVLQCLTQLLQLD 211
Query: 186 INKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISC 245
I LW +VEEEFV+ V CCYK++E+P I+ +K+K R I ++G ++K+YNH +
Sbjct: 212 IRTLWSLSLVEEEFVSCVTCCCYKLLENPTISHMKNKSTRDAIIHVLGIMVKKYNHMLGA 271
Query: 246 TVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSS-KM 304
VK++QLL++ E L S AQAV + +G K++V EI+REI + E A + S K
Sbjct: 272 CVKVIQLLQHFEQLASVCAQAVAAWSTEYGVKAIVGEIMREIG-QKSSEELAREGSGVKA 330
Query: 305 IAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAK 364
++FL+E+ E +IP + LL +LE ES +R I+ E+L+ V + L D A+
Sbjct: 331 FSSFLSELGTLVPETMIPNISVLLTHLEGESPSLRVAVCEILGEVLVRVLSGDKLDDSAR 390
Query: 365 EQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSN 424
RD +L+ L +H+HD H+ VR +VLQ++ R+V KA+P++ +++E +GRL DKS N
Sbjct: 391 ASRDRFLDTLQEHIHDAHSHVRARVLQVYTRIVNSKALPLSRYTEVMELTVGRLGDKSVN 450
Query: 425 VVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENF 484
V K +QLL I NP++ K ++ V + LE+ ++K+ +A P+ ++
Sbjct: 451 VCKSAIQLLAAFIAHNPYSCKLSS---VDLKKPLEKEMAKLKEMRDAQAEQVPVAVITAT 507
Query: 485 D 485
D
Sbjct: 508 D 508
Score = 521 (188.5 bits), Expect = 8.1e-47, P = 8.1e-47
Identities = 120/370 (32%), Positives = 201/370 (54%)
Query: 446 ATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNV 505
A QY VQ L+ ++ I A+ + GP+ ILE+FDT YS+L H ++++ + ++
Sbjct: 54 AVNQYVVQDVLSAKQLPSHINSFKAAMRSQGPLCILEHFDTAYSVLKHCRTVDVAVKEDI 113
Query: 506 YTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYH 565
+LL++ ++ S L L +L +++ LN VKM++++ + L+ D +
Sbjct: 114 L-ELLIQVVRGLSVSLPTLLMAGTLSAVDRKQQLNAVKMSVFL----LCKLTEMLESDSN 168
Query: 566 XXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFV 625
+ +QWD + L + Q+L+ I LW +VEEEFV
Sbjct: 169 RETIVTAPSKGRKKDKAAGKDLLQWDSE--RDTVLQCLTQLLQLDIRTLWSLSLVEEEFV 226
Query: 626 NMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLV 685
+ V CCYK++E+P I+ +K+K R I ++G ++K+YNH + VK++QLL++ E L
Sbjct: 227 SCVTCCCYKLLENPTISHMKNKSTRDAIIHVLGIMVKKYNHMLGACVKVIQLLQHFEQLA 286
Query: 686 SPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSS-KMIAAFLNEVAAHGAEY 744
S AQAV + +G K++V EI+REI + E A + S K ++FL+E+ E
Sbjct: 287 SVCAQAVAAWSTEYGVKAIVGEIMREIG-QKSSEELAREGSGVKAFSSFLSELGTLVPET 345
Query: 745 VIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMH 804
+IP + LL +LE ES +R I+ E+L+ V + L D A+ RD +L+ L +H+H
Sbjct: 346 MIPNISVLLTHLEGESPSLRVAVCEILGEVLVRVLSGDKLDDSARASRDRFLDTLQEHIH 405
Query: 805 DVHTFVRTKV 814
D H+ VR +V
Sbjct: 406 DAHSHVRARV 415
Score = 40 (19.1 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 601 NSIHQILKSKINKLWDPP--VVEEEF 624
N+I+ +L I++L DP + EE+F
Sbjct: 1183 NAIYNLLPDIISRLSDPERGMNEEDF 1208
Score = 40 (19.1 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 19/74 (25%), Positives = 29/74 (39%)
Query: 747 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDV 806
P + L LN E N + LL ++ R LSD + +E N ++ +
Sbjct: 1165 PHIASLALNFFNELSAKDNA----IYNLLPDIISR--LSDPERGMNEEDFNTIMKQLFSY 1218
Query: 807 HTFVRTKVSTEKKL 820
T R S +KL
Sbjct: 1219 ITKERQTESLVEKL 1232
Score = 38 (18.4 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 747 PAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLD 801
P L L E+ +R +T++T+L++ +D+ + K Q E +LLD
Sbjct: 1114 PWTPNLYARLSDENASVRLTAITVLTQLVL-----KDVM-KVKGQVSEVAVLLLD 1162
>UNIPROTKB|F1N3G4 [details] [associations]
symbol:NCAPD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045120 "pronucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076 GO:GO:0000228
GO:GO:0045120 OMA:TERQHRD InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 GeneTree:ENSGT00390000017108 GO:GO:0000796
EMBL:DAAA02014466 EMBL:DAAA02014463 EMBL:DAAA02014464
EMBL:DAAA02014465 IPI:IPI00827207 PRIDE:F1N3G4
Ensembl:ENSBTAT00000019603 ArrayExpress:F1N3G4 Uniprot:F1N3G4
Length = 1397
Score = 666 (239.5 bits), Expect = 3.0e-66, Sum P(2) = 3.0e-66
Identities = 151/442 (34%), Positives = 244/442 (55%)
Query: 4 VLEFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLY 63
V EF +P S +ELL+ QY VQ L++ +K A GP+ +LE+FDT+Y
Sbjct: 5 VWEFHLPLSPEELLKSGGVNQYVVQEVLSIRHLPSYLKAFQTAFRAQGPLAVLEHFDTIY 64
Query: 64 SMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWV 123
S+L HF+SI+ + + + L++ + S L L +L + +LN +KM +
Sbjct: 65 SILHHFRSIDPGLKEDTL-EFLIKVVSRHSQELPAILDDAALSVSDRSAHLNALKMNCYA 123
Query: 124 FTEFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILK 183
+ +FET + H +DW+ L + Q+L+
Sbjct: 124 LIRLLESFETTSSQT-GLMDVELGGKGRKSRAKATHG----FDWEEERQPILQLLTQLLQ 178
Query: 184 SKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGI 243
I LW+ ++EEEFV++V CCY+++E+P I+ K++ R I ++G + RYNH +
Sbjct: 179 LDIRHLWNHSIIEEEFVSLVTGCCYRLLENPTISHQKNRPTREAITHLLGVALTRYNHML 238
Query: 244 SCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSK 303
S TVKI+Q+L++ EHL S L AV ++ ++G KS+V EIVREI + +K
Sbjct: 239 SATVKIIQMLQHFEHLASILVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPTGAK 298
Query: 304 MIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEA 363
AAFL E+A ++ +M LL +L+ E+Y+MRN L + E+++ V + L +
Sbjct: 299 GFAAFLTELAERIPAILMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAAS 358
Query: 364 KEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSS 423
++ RD++L+ L H HDV++FVR++VLQLF R+V KA+P+ ++ A+GRL DKS
Sbjct: 359 RDTRDQFLDTLQAHCHDVNSFVRSRVLQLFTRIVQQKALPLMRFQAVVALAVGRLADKSV 418
Query: 424 NVVKYTVQLLKTMIESNPFAAK 445
V K +QLL + + +NPF+ K
Sbjct: 419 LVCKSAIQLLASFLANNPFSCK 440
Score = 516 (186.7 bits), Expect = 2.9e-46, P = 2.9e-46
Identities = 118/366 (32%), Positives = 197/366 (53%)
Query: 449 QYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTK 508
QY VQ L++ +K A GP+ +LE+FDT+YS+L HF+SI+ + + +
Sbjct: 25 QYVVQEVLSIRHLPSYLKAFQTAFRAQGPLAVLEHFDTIYSILHHFRSIDPGLKEDTL-E 83
Query: 509 LLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXXX 568
L++ + S L L +L + +LN +KM + + +FET +
Sbjct: 84 FLIKVVSRHSQELPAILDDAALSVSDRSAHLNALKMNCYALIRLLESFETTSSQT-GLMD 142
Query: 569 XXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMV 628
H +DW+ L + Q+L+ I LW+ ++EEEFV++V
Sbjct: 143 VELGGKGRKSRAKATHG----FDWEEERQPILQLLTQLLQLDIRHLWNHSIIEEEFVSLV 198
Query: 629 ANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPL 688
CCY+++E+P I+ K++ R I ++G + RYNH +S TVKI+Q+L++ EHL S L
Sbjct: 199 TGCCYRLLENPTISHQKNRPTREAITHLLGVALTRYNHMLSATVKIIQMLQHFEHLASIL 258
Query: 689 AQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPA 748
AV ++ ++G KS+V EIVREI + +K AAFL E+A ++ +
Sbjct: 259 VAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPTGAKGFAAFLTELAERIPAILMSS 318
Query: 749 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHT 808
M LL +L+ E+Y+MRN L + E+++ V + L +++ RD++L+ L H HDV++
Sbjct: 319 MCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAASRDTRDQFLDTLQAHCHDVNS 378
Query: 809 FVRTKV 814
FVR++V
Sbjct: 379 FVRSRV 384
Score = 48 (22.0 bits), Expect = 3.0e-66, Sum P(2) = 3.0e-66
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 596 LSNGLNSIHQILKSKINKLWDPP--VVEEEFVNMVANCCYKIIEDPCIASVKHK 647
LSN N+I+ +L I++L P V EE F ++ I +D S+ K
Sbjct: 1153 LSNKANAIYNLLPDIISRLSAPEGGVEEEPFHTIMKQLLSYITKDKQTESLVEK 1206
>RGD|1562596 [details] [associations]
symbol:Ncapd2 "non-SMC condensin I complex, subunit D2"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=IEA;ISO] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000796 "condensin complex" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0045120
"pronucleus" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 RGD:1562596 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0007076 GO:GO:0000228 GO:GO:0045120 CTD:9918 KO:K06677
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 OrthoDB:EOG4W6NV7 GO:GO:0000796
IPI:IPI00198515 RefSeq:XP_001065923.3 RefSeq:XP_575668.4
UniGene:Rn.7870 Ensembl:ENSRNOT00000025889 GeneID:362438
KEGG:rno:362438 UCSC:RGD:1562596 Uniprot:D3ZHP6
Length = 1390
Score = 665 (239.2 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 156/447 (34%), Positives = 251/447 (56%)
Query: 6 EFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM 65
EF +P S +ELL+ + QY VQ L ++ +++ A GP+ IL++FDT+YS+
Sbjct: 7 EFHLPLSPEELLKSRGVNQYVVQEVLPIKHLPTQLRAFQSAFRAQGPLAILDHFDTIYSI 66
Query: 66 LTHFKSIEYKILHNVYT---KLLLRSLKEFSSILDNF-LSGDSLDEELQEKYLNVVKMTL 121
+ HF+SIE + + K++ +E SSILD+ LSG + +LN +KM
Sbjct: 67 IHHFRSIEPGLKEDTLEFLMKVVSCHSQELSSILDDAALSGSD-----RSAHLNALKMNC 121
Query: 122 WVFTEFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQI 181
+ + +FE + + + W+ L + Q+
Sbjct: 122 YALIRLLESFENMTSQ-----TGLIDLDIGGKGKKARAKTALGFVWEEERQPVLELLTQL 176
Query: 182 LKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNH 241
L+ I LW V+EEEFV++V CCY+++E+P I+ K++ + I ++G + RYNH
Sbjct: 177 LQLDIRHLWSHSVIEEEFVSLVTGCCYRLLENPTISHQKNRSTKEAIAHLLGVALVRYNH 236
Query: 242 GISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISA---MEDGNENAG 298
+S TVKI+Q+L++ EHL S L AV ++ ++G KS+V EIVREI E + AG
Sbjct: 237 MLSATVKIIQMLQHFEHLPSVLVAAVTLWATDYGMKSIVGEIVREIGQKCPQEMSRDTAG 296
Query: 299 QDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKRED 358
+K AAFL E+A ++ +M LL +L+ E+Y+MRN L + E+++ V +
Sbjct: 297 ---AKGFAAFLTELAERIPAALMSSMCMLLDHLDGENYMMRNAVLAAMAEMILQVLNGDQ 353
Query: 359 LSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRL 418
L + A+E RD++L++L H HDV++FVR++VLQLF R+V KA+P+ ++ A+GRL
Sbjct: 354 LEESARETRDQFLDILQAHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQAVVALAVGRL 413
Query: 419 MDKSSNVVKYTVQLLKTMIESNPFAAK 445
DKS V K +QLL + + +NPF+ K
Sbjct: 414 ADKSVLVCKNAIQLLASFLANNPFSCK 440
Score = 516 (186.7 bits), Expect = 2.9e-46, P = 2.9e-46
Identities = 124/378 (32%), Positives = 206/378 (54%)
Query: 444 AKATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILH 503
++ QY VQ L ++ +++ A GP+ IL++FDT+YS++ HF+SIE +
Sbjct: 20 SRGVNQYVVQEVLPIKHLPTQLRAFQSAFRAQGPLAILDHFDTIYSIIHHFRSIEPGLKE 79
Query: 504 NVYT---KLLLRSLKEFSSILDNF-LSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETR 559
+ K++ +E SSILD+ LSG + +LN +KM + + +FE
Sbjct: 80 DTLEFLMKVVSCHSQELSSILDDAALSGSD-----RSAHLNALKMNCYALIRLLESFENM 134
Query: 560 LQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPV 619
+ + + W+ L + Q+L+ I LW V
Sbjct: 135 TSQ-----TGLIDLDIGGKGKKARAKTALGFVWEEERQPVLELLTQLLQLDIRHLWSHSV 189
Query: 620 VEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLK 679
+EEEFV++V CCY+++E+P I+ K++ + I ++G + RYNH +S TVKI+Q+L+
Sbjct: 190 IEEEFVSLVTGCCYRLLENPTISHQKNRSTKEAIAHLLGVALVRYNHMLSATVKIIQMLQ 249
Query: 680 NCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISA---MEDGNENAGQDSSKMIAAFLNE 736
+ EHL S L AV ++ ++G KS+V EIVREI E + AG +K AAFL E
Sbjct: 250 HFEHLPSVLVAAVTLWATDYGMKSIVGEIVREIGQKCPQEMSRDTAG---AKGFAAFLTE 306
Query: 737 VAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYL 796
+A ++ +M LL +L+ E+Y+MRN L + E+++ V + L + A+E RD++L
Sbjct: 307 LAERIPAALMSSMCMLLDHLDGENYMMRNAVLAAMAEMILQVLNGDQLEESARETRDQFL 366
Query: 797 NVLLDHMHDVHTFVRTKV 814
++L H HDV++FVR++V
Sbjct: 367 DILQAHGHDVNSFVRSRV 384
Score = 47 (21.6 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 596 LSNGLNSIHQILKSKINKLWDPP--VVEEEFVNMVANCCYKIIEDPCIASVKHK 647
LS+ N+I+ +L I++L DP V EE F ++ I +D S+ K
Sbjct: 1145 LSHKGNAIYNLLPDIISRLSDPEGGVGEEPFHTIMKQLLSYITKDKQTESLVEK 1198
>UNIPROTKB|E2RHZ0 [details] [associations]
symbol:NCAPD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076 CTD:9918 KO:K06677
OMA:TERQHRD InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 EMBL:AAEX03015287 RefSeq:XP_534910.3
Ensembl:ENSCAFT00000024019 GeneID:477715 KEGG:cfa:477715
Uniprot:E2RHZ0
Length = 1400
Score = 652 (234.6 bits), Expect = 2.0e-64, Sum P(2) = 2.0e-64
Identities = 148/440 (33%), Positives = 245/440 (55%)
Query: 6 EFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM 65
EF +P S +ELL+ QY VQ L+++ +++ A G + +LE+FDT+YS+
Sbjct: 7 EFHLPISPEELLKSGRVNQYVVQEILSIKHLPSQLRAFQAAFRAQGSLAMLEHFDTVYSI 66
Query: 66 LTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFT 125
L HF+SI+ + + + L++ + S L L +L + +LN +KM +
Sbjct: 67 LHHFRSIDPGLQEDTL-EFLIKVVSRHSQELPAILDDAALSVSDRSAHLNALKMNCYALI 125
Query: 126 EFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSK 185
+ +FET + H +DW+ L + Q+L+
Sbjct: 126 RLLESFETMSSQT--SLRDLDLGKGKKARAKTAHG----FDWEEERQPILQLLTQLLQLD 179
Query: 186 INKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISC 245
I LW+ ++EEEFV++V CCY+++E+P I+ K++ R I +++G + RYNH +S
Sbjct: 180 IRHLWNHSIIEEEFVSLVTGCCYRLLENPTISHQKNRPTREAITRLLGVALTRYNHMLSA 239
Query: 246 TVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMI 305
+VKI+Q+L++ EHL S L AV ++ ++G KS+V EIVREI + +K
Sbjct: 240 SVKIIQMLQHFEHLASVLVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPVGTKGF 299
Query: 306 AAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKE 365
AAFL E+A ++ +M LL L+ E+Y+MRN L + E+++ V + L + A++
Sbjct: 300 AAFLTELAERIPAILMSSMCILLDYLDGENYMMRNAVLAAMAEMVLQVLNGDQLEEAARD 359
Query: 366 QRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNV 425
RD++L+ L H HDV++FVR++VLQLF R+V KA+P+ ++ A+GRL DKS V
Sbjct: 360 TRDQFLDTLQAHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQAVVALAVGRLADKSVLV 419
Query: 426 VKYTVQLLKTMIESNPFAAK 445
K +QLL + + +NPF+ K
Sbjct: 420 CKNAIQLLASFLANNPFSCK 439
Score = 504 (182.5 bits), Expect = 6.6e-45, P = 6.6e-45
Identities = 116/366 (31%), Positives = 199/366 (54%)
Query: 449 QYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTK 508
QY VQ L+++ +++ A G + +LE+FDT+YS+L HF+SI+ + + +
Sbjct: 25 QYVVQEILSIKHLPSQLRAFQAAFRAQGSLAMLEHFDTVYSILHHFRSIDPGLQEDTL-E 83
Query: 509 LLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXXX 568
L++ + S L L +L + +LN +KM + + +FET +
Sbjct: 84 FLIKVVSRHSQELPAILDDAALSVSDRSAHLNALKMNCYALIRLLESFETMSSQT--SLR 141
Query: 569 XXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMV 628
H +DW+ L + Q+L+ I LW+ ++EEEFV++V
Sbjct: 142 DLDLGKGKKARAKTAHG----FDWEEERQPILQLLTQLLQLDIRHLWNHSIIEEEFVSLV 197
Query: 629 ANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPL 688
CCY+++E+P I+ K++ R I +++G + RYNH +S +VKI+Q+L++ EHL S L
Sbjct: 198 TGCCYRLLENPTISHQKNRPTREAITRLLGVALTRYNHMLSASVKIIQMLQHFEHLASVL 257
Query: 689 AQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPA 748
AV ++ ++G KS+V EIVREI + +K AAFL E+A ++ +
Sbjct: 258 VAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPVGTKGFAAFLTELAERIPAILMSS 317
Query: 749 MEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHT 808
M LL L+ E+Y+MRN L + E+++ V + L + A++ RD++L+ L H HDV++
Sbjct: 318 MCILLDYLDGENYMMRNAVLAAMAEMVLQVLNGDQLEEAARDTRDQFLDTLQAHGHDVNS 377
Query: 809 FVRTKV 814
FVR++V
Sbjct: 378 FVRSRV 383
Score = 45 (20.9 bits), Expect = 2.0e-64, Sum P(2) = 2.0e-64
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 596 LSNGLNSIHQILKSKINKLWDPPV-VEEE 623
LS+ N+I+ +L I++L DP VEEE
Sbjct: 1153 LSHKGNAIYNLLPDIISRLSDPEGGVEEE 1181
Score = 41 (19.5 bits), Expect = 5.3e-64, Sum P(2) = 5.3e-64
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 607 LKSKINKLWDPPVVEEEFVNMVAN 630
LKS + +L P EEE +AN
Sbjct: 485 LKSTLQQLLKLPQEEEEIPEAIAN 508
>UNIPROTKB|F1NEH3 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9031
"Gallus gallus" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0045120
"pronucleus" evidence=IEA] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076
GO:GO:0000228 GO:GO:0045120 OMA:TERQHRD InterPro:IPR024324
PANTHER:PTHR14222 Pfam:PF12922 GeneTree:ENSGT00390000017108
GO:GO:0000796 EMBL:AADN02061150 EMBL:AADN02061151 EMBL:AADN02061152
IPI:IPI00585030 Ensembl:ENSGALT00000023320 Uniprot:F1NEH3
Length = 1393
Score = 578 (208.5 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 140/474 (29%), Positives = 248/474 (52%)
Query: 2 AGVLEFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDT 61
A EF +P + D+LL ++ Y VQ L++ E + A G + +L++FDT
Sbjct: 3 AAQCEFQLPLAADDLLRGDSSRHYVVQEVLSVRELPPAVAAFRAAFRERGALAVLQHFDT 62
Query: 62 LYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTL 121
+YS+L HF+++ + +L+++ + S+ L L+ L ++ +LN +KM
Sbjct: 63 IYSLLRHFRALGTAAKEDAL-ELMMQVVTRHSNELSTILNDSGLSHTDRDAHLNALKMNC 121
Query: 122 WVFTEFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQI 181
++ + + FE K + + W+ L + Q+
Sbjct: 122 YLLSGLLEAFEMEAFKS------GLVEVDPAGKNKKSRTKASGFSWEDEREPLLRLLTQL 175
Query: 182 LKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNH 241
L+ + +LW VVEEE V+++ CCY+I+E+ I +++ R ++ + Y+H
Sbjct: 176 LQLDLRQLWSGLVVEEELVSLLTGCCYRILENSNIGLQRYRATREAATHLLATALTHYDH 235
Query: 242 GISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDS 301
S T+KI Q+L++ EH+ AQAV ++ + +G KS+V E++REI + + +D+
Sbjct: 236 MFSATLKITQMLQHFEHVAPVFAQAVTLWAKEYGLKSIVGELLREIG--QKCPQELARDT 293
Query: 302 S--KMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDL 359
S K A F+ E+A V+ + LL +L+ E+Y+MRN L+ + E+L+ V + L
Sbjct: 294 SGIKGYAVFITELAEQIPALVLSNISVLLRHLDGENYMMRNAILSAMAEVLLQVLNGDQL 353
Query: 360 SDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLM 419
+ A+ RD +L L H+ DV+ FVR++VLQLF R+V K +P+ L ++ A+GRL
Sbjct: 354 EEAARGTRDNFLKTLQAHICDVNGFVRSRVLQLFTRIVQGKVLPLTQFLSVVSLAVGRLK 413
Query: 420 DKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQA-ELTLEEFNERIKD-CFEA 471
DKS VVK +QLL + +NP++ K + + + +++ E +KD C EA
Sbjct: 414 DKSVVVVKNAIQLLAAFLSNNPYSCKLSCSDLAEPLKKEVQKLQE-MKDRCREA 466
Score = 422 (153.6 bits), Expect = 7.6e-36, P = 7.6e-36
Identities = 102/371 (27%), Positives = 189/371 (50%)
Query: 446 ATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNV 505
++ Y VQ L++ E + A G + +L++FDT+YS+L HF+++ +
Sbjct: 22 SSRHYVVQEVLSVRELPPAVAAFRAAFRERGALAVLQHFDTIYSLLRHFRALGTAAKEDA 81
Query: 506 YTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYH 565
+L+++ + S+ L L+ L ++ +LN +KM ++ + + FE K
Sbjct: 82 L-ELMMQVVTRHSNELSTILNDSGLSHTDRDAHLNALKMNCYLLSGLLEAFEMEAFKS-- 138
Query: 566 XXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFV 625
+ + W+ L + Q+L+ + +LW VVEEE V
Sbjct: 139 ----GLVEVDPAGKNKKSRTKASGFSWEDEREPLLRLLTQLLQLDLRQLWSGLVVEEELV 194
Query: 626 NMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLV 685
+++ CCY+I+E+ I +++ R ++ + Y+H S T+KI Q+L++ EH+
Sbjct: 195 SLLTGCCYRILENSNIGLQRYRATREAATHLLATALTHYDHMFSATLKITQMLQHFEHVA 254
Query: 686 SPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSS--KMIAAFLNEVAAHGAE 743
AQAV ++ + +G KS+V E++REI + + +D+S K A F+ E+A
Sbjct: 255 PVFAQAVTLWAKEYGLKSIVGELLREIG--QKCPQELARDTSGIKGYAVFITELAEQIPA 312
Query: 744 YVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHM 803
V+ + LL +L+ E+Y+MRN L+ + E+L+ V + L + A+ RD +L L H+
Sbjct: 313 LVLSNISVLLRHLDGENYMMRNAILSAMAEVLLQVLNGDQLEEAARGTRDNFLKTLQAHI 372
Query: 804 HDVHTFVRTKV 814
DV+ FVR++V
Sbjct: 373 CDVNGFVRSRV 383
Score = 51 (23.0 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 596 LSNGLNSIHQILKSKINKLWDPP--VVEEEFVNMVANCCYKIIEDPCIASVKHK 647
LSN N+I+ +L I++L DP + EE F ++ + I +D S+ K
Sbjct: 1165 LSNKDNAIYNLLPDIISRLSDPDCGIDEESFHTIMRHLFPYITKDKQTESLVEK 1218
>UNIPROTKB|F1NH88 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 EMBL:AADN02061150 EMBL:AADN02061151
EMBL:AADN02061152 IPI:IPI00581041 Ensembl:ENSGALT00000023319
Uniprot:F1NH88
Length = 1386
Score = 578 (208.5 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 140/474 (29%), Positives = 248/474 (52%)
Query: 2 AGVLEFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDT 61
A EF +P + D+LL ++ Y VQ L++ E + A G + +L++FDT
Sbjct: 3 AAQCEFQLPLAADDLLRGDSSRHYVVQEVLSVRELPPAVAAFRAAFRERGALAVLQHFDT 62
Query: 62 LYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTL 121
+YS+L HF+++ + +L+++ + S+ L L+ L ++ +LN +KM
Sbjct: 63 IYSLLRHFRALGTAAKEDAL-ELMMQVVTRHSNELSTILNDSGLSHTDRDAHLNALKMNC 121
Query: 122 WVFTEFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQI 181
++ + + FE K + + W+ L + Q+
Sbjct: 122 YLLSGLLEAFEMEAFKS------GLVEVDPAGKNKKSRTKASGFSWEDEREPLLRLLTQL 175
Query: 182 LKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNH 241
L+ + +LW VVEEE V+++ CCY+I+E+ I +++ R ++ + Y+H
Sbjct: 176 LQLDLRQLWSGLVVEEELVSLLTGCCYRILENSNIGLQRYRATREAATHLLATALTHYDH 235
Query: 242 GISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDS 301
S T+KI Q+L++ EH+ AQAV ++ + +G KS+V E++REI + + +D+
Sbjct: 236 MFSATLKITQMLQHFEHVAPVFAQAVTLWAKEYGLKSIVGELLREIG--QKCPQELARDT 293
Query: 302 S--KMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDL 359
S K A F+ E+A V+ + LL +L+ E+Y+MRN L+ + E+L+ V + L
Sbjct: 294 SGIKGYAVFITELAEQIPALVLSNISVLLRHLDGENYMMRNAILSAMAEVLLQVLNGDQL 353
Query: 360 SDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLM 419
+ A+ RD +L L H+ DV+ FVR++VLQLF R+V K +P+ L ++ A+GRL
Sbjct: 354 EEAARGTRDNFLKTLQAHICDVNGFVRSRVLQLFTRIVQGKVLPLTQFLSVVSLAVGRLK 413
Query: 420 DKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQA-ELTLEEFNERIKD-CFEA 471
DKS VVK +QLL + +NP++ K + + + +++ E +KD C EA
Sbjct: 414 DKSVVVVKNAIQLLAAFLSNNPYSCKLSCSDLAEPLKKEVQKLQE-MKDRCREA 466
Score = 422 (153.6 bits), Expect = 7.5e-36, P = 7.5e-36
Identities = 102/371 (27%), Positives = 189/371 (50%)
Query: 446 ATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNV 505
++ Y VQ L++ E + A G + +L++FDT+YS+L HF+++ +
Sbjct: 22 SSRHYVVQEVLSVRELPPAVAAFRAAFRERGALAVLQHFDTIYSLLRHFRALGTAAKEDA 81
Query: 506 YTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYH 565
+L+++ + S+ L L+ L ++ +LN +KM ++ + + FE K
Sbjct: 82 L-ELMMQVVTRHSNELSTILNDSGLSHTDRDAHLNALKMNCYLLSGLLEAFEMEAFKS-- 138
Query: 566 XXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFV 625
+ + W+ L + Q+L+ + +LW VVEEE V
Sbjct: 139 ----GLVEVDPAGKNKKSRTKASGFSWEDEREPLLRLLTQLLQLDLRQLWSGLVVEEELV 194
Query: 626 NMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLV 685
+++ CCY+I+E+ I +++ R ++ + Y+H S T+KI Q+L++ EH+
Sbjct: 195 SLLTGCCYRILENSNIGLQRYRATREAATHLLATALTHYDHMFSATLKITQMLQHFEHVA 254
Query: 686 SPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSS--KMIAAFLNEVAAHGAE 743
AQAV ++ + +G KS+V E++REI + + +D+S K A F+ E+A
Sbjct: 255 PVFAQAVTLWAKEYGLKSIVGELLREIG--QKCPQELARDTSGIKGYAVFITELAEQIPA 312
Query: 744 YVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHM 803
V+ + LL +L+ E+Y+MRN L+ + E+L+ V + L + A+ RD +L L H+
Sbjct: 313 LVLSNISVLLRHLDGENYMMRNAILSAMAEVLLQVLNGDQLEEAARGTRDNFLKTLQAHI 372
Query: 804 HDVHTFVRTKV 814
DV+ FVR++V
Sbjct: 373 CDVNGFVRSRV 383
Score = 40 (19.1 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 32/143 (22%), Positives = 58/143 (40%)
Query: 601 NSIHQILKSKINKLWDPP--VVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVG 658
N+I+ +L I++L DP + EE F ++ + I +D S+ K + F
Sbjct: 1168 NAIYNLLPDIISRLSDPDCGIDEESFHTIMRHLFPYITKDKQTESLVEKLCQRFRTARNE 1227
Query: 659 YLIKRYNHGISCTV----KIVQLLKN--C--EHLVSPLA----QAVVMFIRNHGCKSLVR 706
+ +H +S + +L N C + L P QAV++ R K +
Sbjct: 1228 RQYRDLSHCLSLLPISERGLHKLQDNFDCFADKLQDPAVYSCFQAVLVRCRRAASKPETK 1287
Query: 707 EIVREISAMEDGNENAGQDSSKM 729
+ E+ N G DS+++
Sbjct: 1288 ALAEELEQKLSACHNQGLDSAEV 1310
>UNIPROTKB|F5GZJ1 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9606
"Homo sapiens" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076 EMBL:AC006064
HGNC:HGNC:24305 ChiTaRS:NCAPD2 InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 IPI:IPI01014221 ProteinModelPortal:F5GZJ1 SMR:F5GZJ1
Ensembl:ENST00000545962 UCSC:uc010sfd.1 ArrayExpress:F5GZJ1
Bgee:F5GZJ1 Uniprot:F5GZJ1
Length = 1356
Score = 545 (196.9 bits), Expect = 5.6e-50, Sum P(3) = 5.6e-50
Identities = 125/363 (34%), Positives = 202/363 (55%)
Query: 84 LLLRSLKEFSSILDNF-LSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXX 142
++ R +E +ILD+ LSG + +LN +KM + + +FET + +
Sbjct: 43 MVSRHSQELPAILDDTTLSGSD-----RNAHLNALKMNCYALIRLLESFET-MASQTNLV 96
Query: 143 XXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNM 202
H +DW+ L + Q+L+ I LW+ ++EEEFV++
Sbjct: 97 DLDLGGKGKKARTKAAHG----FDWEEERQPILQLLTQLLQLDIRHLWNHSIIEEEFVSL 152
Query: 203 VANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSP 262
V CCY+++E+P I K++ R I ++G + RYNH +S TVKI+Q+L++ EHL
Sbjct: 153 VTGCCYRLLENPTINHQKNRPTREAITHLLGVALTRYNHMLSATVKIIQMLQHFEHLAPV 212
Query: 263 LAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIP 322
L AV ++ ++G KS+V EIVREI + +K AAFL E+A ++
Sbjct: 213 LVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPSGTKGFAAFLTELAERVPAILMS 272
Query: 323 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVH 382
+M LL +L+ E+Y+MRN L + E+++ V + L A++ RD++L+ L H HDV+
Sbjct: 273 SMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAAARDTRDQFLDTLQAHGHDVN 332
Query: 383 TFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPF 442
+FVR++VLQLF R+V KA+P+ ++ A+GRL DKS V K +QLL + + +NPF
Sbjct: 333 SFVRSRVLQLFTRIVQQKALPLTRFQAVVALAVGRLADKSVLVCKNAIQLLASFLANNPF 392
Query: 443 AAK 445
+ K
Sbjct: 393 SCK 395
Score = 428 (155.7 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 100/307 (32%), Positives = 166/307 (54%)
Query: 509 LLLRSLKEFSSILDNF-LSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXX 567
++ R +E +ILD+ LSG + +LN +KM + + +FET + +
Sbjct: 43 MVSRHSQELPAILDDTTLSGSD-----RNAHLNALKMNCYALIRLLESFET-MASQTNLV 96
Query: 568 XXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNM 627
H +DW+ L + Q+L+ I LW+ ++EEEFV++
Sbjct: 97 DLDLGGKGKKARTKAAHG----FDWEEERQPILQLLTQLLQLDIRHLWNHSIIEEEFVSL 152
Query: 628 VANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSP 687
V CCY+++E+P I K++ R I ++G + RYNH +S TVKI+Q+L++ EHL
Sbjct: 153 VTGCCYRLLENPTINHQKNRPTREAITHLLGVALTRYNHMLSATVKIIQMLQHFEHLAPV 212
Query: 688 LAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIP 747
L AV ++ ++G KS+V EIVREI + +K AAFL E+A ++
Sbjct: 213 LVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPSGTKGFAAFLTELAERVPAILMS 272
Query: 748 AMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVH 807
+M LL +L+ E+Y+MRN L + E+++ V + L A++ RD++L+ L H HDV+
Sbjct: 273 SMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAAARDTRDQFLDTLQAHGHDVN 332
Query: 808 TFVRTKV 814
+FVR++V
Sbjct: 333 SFVRSRV 339
Score = 50 (22.7 bits), Expect = 5.6e-50, Sum P(3) = 5.6e-50
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 596 LSNGLNSIHQILKSKINKLWDPPV-VEEE-FVNMVANCCYKIIEDPCIASVKHK 647
LS+ N+I+ +L I++L DP + VEEE F ++ I +D S+ K
Sbjct: 1111 LSHKGNAIYNLLPDIISRLSDPELGVEEEPFHTIMKQLLSYITKDKQTESLVEK 1164
Score = 42 (19.8 bits), Expect = 2.8e-49, Sum P(2) = 2.8e-49
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 607 LKSKINKLWDPPVVEEEFVNMVAN 630
LKS + +L P EEE +AN
Sbjct: 441 LKSTLQQLLQLPQGEEEIPEQIAN 464
Score = 38 (18.4 bits), Expect = 5.6e-50, Sum P(3) = 5.6e-50
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 414 AIGRLMDKSSNVVKYTVQLLKTMIESNP 441
A+G+ S+ ++LL TM+E +P
Sbjct: 995 ALGKFCMISATFCDSQLRLLFTMLEKSP 1022
>FB|FBgn0039680 [details] [associations]
symbol:CAP-D2 "CAP-D2 condensin subunit" species:7227
"Drosophila melanogaster" [GO:0007067 "mitosis" evidence=ISS]
[GO:0000796 "condensin complex" evidence=ISS] [GO:0000070 "mitotic
sister chromatid segregation" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0007076 "mitotic chromosome condensation"
evidence=IMP] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 EMBL:AE014297 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0007052 GO:GO:0007076 eggNOG:COG5098 KO:K06677 OMA:TERQHRD
ChiTaRS:NCAPD2 InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 GO:GO:0000796 EMBL:AY122183
RefSeq:NP_651709.1 UniGene:Dm.28357 IntAct:Q9VAJ1 MINT:MINT-991637
STRING:Q9VAJ1 EnsemblMetazoa:FBtr0085452 GeneID:43491
KEGG:dme:Dmel_CG1911 UCSC:CG1911-RA CTD:43491 FlyBase:FBgn0039680
InParanoid:Q9VAJ1 OrthoDB:EOG47D7WZ GenomeRNAi:43491 NextBio:834214
Uniprot:Q9VAJ1
Length = 1380
Score = 542 (195.9 bits), Expect = 9.3e-49, Sum P(2) = 9.3e-49
Identities = 141/507 (27%), Positives = 254/507 (50%)
Query: 6 EFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM 65
+FV+P + +L+ QYYV+ +E ++++C + P +I E+FD YS+
Sbjct: 8 QFVLPLNASDLINSSGD-QYYVKEIFGAQEIPAKLQECKRKVHLGDPFYIFEHFDLYYSI 66
Query: 66 LTHFKS--IEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWV 123
+ S + L + L L K F + + + + + + YLN+ KMTL++
Sbjct: 67 IEARGSDGASAQNLMRSFDLLYLTVEKLFQDLQPLLTASEPMSNQQRNSYLNLTKMTLFL 126
Query: 124 FTEFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILK 183
+ +Q+ E+ +W+ L + +L+
Sbjct: 127 QVSTVKKINNSVQQAMRDQQLNVQKKRAKPSEGL---EQFP-NWEVKRGKFLVQLFNVLQ 182
Query: 184 SKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVF--IFQIVGYLIKRYNH 241
+ KLW PPV EE+F+N++ + CY+ IE + ++ VF IFQI+G IKR+N
Sbjct: 183 CPLEKLWSPPVAEEDFINLLCDPCYRTIE---LLPLRMDNKHVFDTIFQILGTSIKRFNQ 239
Query: 242 GISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREI-SAMEDGNENAGQD 300
++ V+I+Q+L+ EH +A +++ +G S+ +++ I A+ +++
Sbjct: 240 AMTFPVRILQILRGTEHAAHSVAAGILLLHEEYGISSVFSILIKSIVDALR--MDSSDSS 297
Query: 301 SSKMIAAFLNEVAAHGAEYVIPAMEELLLNL-EKESYLMRNCTLTIVTELLINVYKREDL 359
SK + FL E + ++P +E+L +L + +S+ +RNC L I+ + +++ EDL
Sbjct: 298 VSKHFSNFLAEFSNIAPSLIVPHLEKLAEDLLDCQSHTLRNCVLQIIGDTVVSELTSEDL 357
Query: 360 SDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLM 419
S+E KE R+E+L L+ H+ D+ VR+KVL ++ L AIP+ F ++LE AIGRL
Sbjct: 358 SEELKEVRNEFLEHLMAHILDISAHVRSKVLSIWHHLKTQHAIPLNFLTRVLEEAIGRLE 417
Query: 420 DKSSNVVKYTVQLLKTMIESNPFAAK-------ATTQYYVQAELTLEEFNERIKDCFEAL 472
DKSS V + + L+K+ +ESNP+++K A ++ VQA L E E + E L
Sbjct: 418 DKSSLVRRAAMHLIKSALESNPYSSKLSIDELRAKHEHEVQAMEKLNEVLEEERKQEEKL 477
Query: 473 DNDGPMFILENFDTLYSMLTHFKSIEY 499
+++ E + LT F +++
Sbjct: 478 NDEFSSLAPELLPFIEENLTEFPDMQF 504
Score = 393 (143.4 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 99/372 (26%), Positives = 184/372 (49%)
Query: 449 QYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKS--IEYKILHNVY 506
QYYV+ +E ++++C + P +I E+FD YS++ S + L +
Sbjct: 25 QYYVKEIFGAQEIPAKLQECKRKVHLGDPFYIFEHFDLYYSIIEARGSDGASAQNLMRSF 84
Query: 507 TKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHX 566
L L K F + + + + + + YLN+ KMTL++ + +Q+
Sbjct: 85 DLLYLTVEKLFQDLQPLLTASEPMSNQQRNSYLNLTKMTLFLQVSTVKKINNSVQQAMRD 144
Query: 567 XXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVN 626
E+ +W+ L + +L+ + KLW PPV EE+F+N
Sbjct: 145 QQLNVQKKRAKPSEGL---EQFP-NWEVKRGKFLVQLFNVLQCPLEKLWSPPVAEEDFIN 200
Query: 627 MVANCCYKIIEDPCIASVKHKELRVF--IFQIVGYLIKRYNHGISCTVKIVQLLKNCEHL 684
++ + CY+ IE + ++ VF IFQI+G IKR+N ++ V+I+Q+L+ EH
Sbjct: 201 LLCDPCYRTIE---LLPLRMDNKHVFDTIFQILGTSIKRFNQAMTFPVRILQILRGTEHA 257
Query: 685 VSPLAQAVVMFIRNHGCKSLVREIVREI-SAMEDGNENAGQDSSKMIAAFLNEVAAHGAE 743
+A +++ +G S+ +++ I A+ +++ SK + FL E +
Sbjct: 258 AHSVAAGILLLHEEYGISSVFSILIKSIVDALR--MDSSDSSVSKHFSNFLAEFSNIAPS 315
Query: 744 YVIPAMEELLLNL-EKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDH 802
++P +E+L +L + +S+ +RNC L I+ + +++ EDLS+E KE R+E+L L+ H
Sbjct: 316 LIVPHLEKLAEDLLDCQSHTLRNCVLQIIGDTVVSELTSEDLSEELKEVRNEFLEHLMAH 375
Query: 803 MHDVHTFVRTKV 814
+ D+ VR+KV
Sbjct: 376 ILDISAHVRSKV 387
Score = 41 (19.5 bits), Expect = 9.3e-49, Sum P(2) = 9.3e-49
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 677 LLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAME 716
LLK+ EH V LA + G K E++++I ++
Sbjct: 548 LLKHEEHCVYVLALLKTYHLLAAGFKQSSEEMLQQIKTVQ 587
Score = 39 (18.8 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 12/71 (16%), Positives = 31/71 (43%)
Query: 699 HGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEK 758
HG +S ++ +++ + + + +A D+ K + ++ A V+ + + L +E
Sbjct: 634 HGTESGMQRMLQLVWSSDKEKRDAVSDAYKRVLFSTDQTGRAHAIKVVQNLSKFLSEIEY 693
Query: 759 ESYLMRNCTLT 769
Y +T
Sbjct: 694 GHYTALESLMT 704
Score = 37 (18.1 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 12/60 (20%), Positives = 26/60 (43%)
Query: 478 MFILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEK 537
+++L T + + FK ++L + T L+ +F+ ++ + L E L K
Sbjct: 556 VYVLALLKTYHLLAAGFKQSSEEMLQQIKTVQFLKDSIDFAVLMTSAFP--KLHEMLMSK 613
>UNIPROTKB|E7EN77 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9606
"Homo sapiens" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007076 EMBL:AC006064
HGNC:HGNC:24305 ChiTaRS:NCAPD2 InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 IPI:IPI00445741 ProteinModelPortal:E7EN77 SMR:E7EN77
Ensembl:ENST00000382457 ArrayExpress:E7EN77 Bgee:E7EN77
Uniprot:E7EN77
Length = 919
Score = 460 (167.0 bits), Expect = 7.3e-48, Sum P(3) = 7.3e-48
Identities = 96/246 (39%), Positives = 153/246 (62%)
Query: 200 VNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHL 259
+++V CCY+++E+P I K++ R I ++G + RYNH +S TVKI+Q+L++ EHL
Sbjct: 67 LHLVTGCCYRLLENPTINHQKNRPTREAITHLLGVALTRYNHMLSATVKIIQMLQHFEHL 126
Query: 260 VSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEY 319
L AV ++ ++G KS+V EIVREI + +K AAFL E+A
Sbjct: 127 APVLVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPSGTKGFAAFLTELAERVPAI 186
Query: 320 VIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMH 379
++ +M LL +L+ E+Y+MRN L + E+++ V + L A++ RD++L+ L H H
Sbjct: 187 LMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAAARDTRDQFLDTLQAHGH 246
Query: 380 DVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIES 439
DV++FVR++VLQLF R+V KA+P+ ++ A+GRL DKS V K +QLL + + +
Sbjct: 247 DVNSFVRSRVLQLFTRIVQQKALPLTRFQAVVALAVGRLADKSVLVCKNAIQLLASFLAN 306
Query: 440 NPFAAK 445
NPF+ K
Sbjct: 307 NPFSCK 312
Score = 343 (125.8 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 71/190 (37%), Positives = 117/190 (61%)
Query: 625 VNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHL 684
+++V CCY+++E+P I K++ R I ++G + RYNH +S TVKI+Q+L++ EHL
Sbjct: 67 LHLVTGCCYRLLENPTINHQKNRPTREAITHLLGVALTRYNHMLSATVKIIQMLQHFEHL 126
Query: 685 VSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEY 744
L AV ++ ++G KS+V EIVREI + +K AAFL E+A
Sbjct: 127 APVLVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPSGTKGFAAFLTELAERVPAI 186
Query: 745 VIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMH 804
++ +M LL +L+ E+Y+MRN L + E+++ V + L A++ RD++L+ L H H
Sbjct: 187 LMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAAARDTRDQFLDTLQAHGH 246
Query: 805 DVHTFVRTKV 814
DV++FVR++V
Sbjct: 247 DVNSFVRSRV 256
Score = 116 (45.9 bits), Expect = 7.3e-48, Sum P(3) = 7.3e-48
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 6 EFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM 65
EF +P S +ELL+ QY VQ L+++ +++ A GP+ +L++FDT+YS+
Sbjct: 7 EFHLPLSPEELLKSGGVNQYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYSI 66
Query: 66 LTHFKSIEYKILHN 79
L Y++L N
Sbjct: 67 LHLVTGCCYRLLEN 80
Score = 42 (19.8 bits), Expect = 7.3e-48, Sum P(3) = 7.3e-48
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 607 LKSKINKLWDPPVVEEEFVNMVAN 630
LKS + +L P EEE +AN
Sbjct: 358 LKSTLQQLLQLPQGEEEIPEQIAN 381
>ASPGD|ASPL0000038678 [details] [associations]
symbol:AN3451 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0000939
"condensed chromosome inner kinetochore" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0051301 EMBL:BN001306 GO:GO:0030466 GO:GO:0007076 OMA:TERQHRD
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922 GO:GO:0043007
GO:GO:0010032 GO:GO:0070058 EnsemblFungi:CADANIAT00009583
Uniprot:C8VHB5
Length = 1189
Score = 302 (111.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 78/309 (25%), Positives = 155/309 (50%)
Query: 165 WDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKEL 224
WD + + ++ +++K K++K++ + F+N+ Y I+E VK +
Sbjct: 172 WDGTAQIQVAMETMCKVMKLKLSKIFLTTSDRDTFINLFTRSSYLILESE--QRVKSMAI 229
Query: 225 RVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIV 284
R+ F+++ +K + HG IVQ L EHL P+A+ + + + L EI+
Sbjct: 230 RMHAFKVLCIAVKHHGHGFGAQTSIVQSLTYFEHLSEPMAEFLHILAEQYDYPQLSDEIL 289
Query: 285 REISAME-DGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTL 343
+E+ E + N+ G K ++AF+ +++ +I M L L+ ESY +R +
Sbjct: 290 KELGNKEFNSNDTRGP---KSVSAFIIKLSELAPRLIIKQMTLLAKQLDSESYTLRCAVI 346
Query: 344 TIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLV-LDKAI 402
+ L+ ++ K+E+ +D K Q + + +VL + D++ + R + +Q++ R+ L++
Sbjct: 347 EVCGNLIADLSKQEERTDNYKSQINAFFDVLEERFLDINPYCRCRAIQVYMRICDLEQKF 406
Query: 403 PVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFN 462
P E A L DKSSNV + ++L+ ++ ++PF+ Q L+L+E+
Sbjct: 407 PKR-RQAAAELAARSLEDKSSNVRRNAIKLIAKLVSTHPFSVMHGGQ------LSLKEWT 459
Query: 463 ERIKDCFEA 471
ER+ D +A
Sbjct: 460 ERL-DAVDA 467
Score = 230 (86.0 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 54/225 (24%), Positives = 111/225 (49%)
Query: 590 WDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKEL 649
WD + + ++ +++K K++K++ + F+N+ Y I+E VK +
Sbjct: 172 WDGTAQIQVAMETMCKVMKLKLSKIFLTTSDRDTFINLFTRSSYLILESE--QRVKSMAI 229
Query: 650 RVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIV 709
R+ F+++ +K + HG IVQ L EHL P+A+ + + + L EI+
Sbjct: 230 RMHAFKVLCIAVKHHGHGFGAQTSIVQSLTYFEHLSEPMAEFLHILAEQYDYPQLSDEIL 289
Query: 710 REISAME-DGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTL 768
+E+ E + N+ G K ++AF+ +++ +I M L L+ ESY +R +
Sbjct: 290 KELGNKEFNSNDTRGP---KSVSAFIIKLSELAPRLIIKQMTLLAKQLDSESYTLRCAVI 346
Query: 769 TIVTELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTK 813
+ L+ ++ K+E+ +D K Q + + +VL + D++ + R +
Sbjct: 347 EVCGNLIADLSKQEERTDNYKSQINAFFDVLEERFLDINPYCRCR 391
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 55 ILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEEL 109
+ EN + L + + F S+++ + Y+ L K S +LD +SG S++ ++
Sbjct: 58 VAENPEAL-ARASSFDSLQFLLK---YSNFL--PTKSLSKLLDLIVSGLSVEADI 106
Score = 40 (19.1 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 480 ILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEEL 534
+ EN + L + + F S+++ + Y+ L K S +LD +SG S++ ++
Sbjct: 58 VAENPEAL-ARASSFDSLQFLLK---YSNFL--PTKSLSKLLDLIVSGLSVEADI 106
>DICTYBASE|DDB_G0293984 [details] [associations]
symbol:ncapD2 "non-SMC condensin I complex, subunit
D2" species:44689 "Dictyostelium discoideum" [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR016024
InterPro:IPR026971 dictyBase:DDB_G0293984 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007076 eggNOG:COG5098
KO:K06677 InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
EMBL:AAFI02000224 InterPro:IPR004931 Pfam:PF03247
RefSeq:XP_628899.1 ProteinModelPortal:Q54B17 STRING:Q54B17
EnsemblProtists:DDB0304964 GeneID:8629515 KEGG:ddi:DDB_G0293984
InParanoid:Q54B17 OMA:EPDSAQC ProtClustDB:CLSZ2429200
Uniprot:Q54B17
Length = 1403
Score = 158 (60.7 bits), Expect = 1.6e-21, Sum P(4) = 1.6e-21
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 165 WDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKEL 224
W+ + L SI L+ ++ LW EEEF+N+++ Y +IE P A+++ K +
Sbjct: 86 WEQEEQKEAILTSIINCLELNLSTLWRLDYPEEEFINLLSKIIYAMIEQP--ANLRSKGV 143
Query: 225 RVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLA 264
+ IF+++ LI RYNH + T KI+ LL N E L S A
Sbjct: 144 KKLIFEVLSILILRYNHSFNFTSKIIHLLHNHESLPSHCA 183
Score = 158 (60.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 590 WDWDFHLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKEL 649
W+ + L SI L+ ++ LW EEEF+N+++ Y +IE P A+++ K +
Sbjct: 86 WEQEEQKEAILTSIINCLELNLSTLWRLDYPEEEFINLLSKIIYAMIEQP--ANLRSKGV 143
Query: 650 RVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLA 689
+ IF+++ LI RYNH + T KI+ LL N E L S A
Sbjct: 144 KKLIFEVLSILILRYNHSFNFTSKIIHLLHNHESLPSHCA 183
Score = 130 (50.8 bits), Expect = 1.6e-21, Sum P(4) = 1.6e-21
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 355 KREDLSDEAKEQRD--EYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLE 412
+ E++ ++ K + D E L++L + D++ + R+ VL+ LV + +P ++L +
Sbjct: 312 EEEEVENQKKNESDQSELLHILFERCRDINGYCRSSVLKTLSLLVNNNWVPKESYIQLTK 371
Query: 413 RAIGRLMDKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEF 461
AI R+ DK+S V K + LL ++ESNP++ T + + L F
Sbjct: 372 IAIERVSDKNSLVRKRAILLLSDILESNPYSPHLPTLLFKDKKEKLASF 420
Score = 108 (43.1 bits), Expect = 1.6e-21, Sum P(4) = 1.6e-21
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 279 LVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLM 338
L+ +I+REI ++ + +G K +A FL+E+ + V+P + LL +L+ ESYLM
Sbjct: 224 LISDIIREIGKQKEQRDTSG---FKNLAKFLSELTDRLPKIVLPFVSLLLAHLDSESYLM 280
Query: 339 RNCTLTIVTELLINVYKREDLS--DEAKEQRDE 369
RN + L+ + + + D+ EQ +E
Sbjct: 281 RNAVTESIGFLIGKALNKVESNNKDKKSEQEEE 313
Score = 108 (43.1 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 704 LVREIVREISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLM 763
L+ +I+REI ++ + +G K +A FL+E+ + V+P + LL +L+ ESYLM
Sbjct: 224 LISDIIREIGKQKEQRDTSG---FKNLAKFLSELTDRLPKIVLPFVSLLLAHLDSESYLM 280
Query: 764 RNCTLTIVTELLINVYKREDLS--DEAKEQRDE 794
RN + L+ + + + D+ EQ +E
Sbjct: 281 RNAVTESIGFLIGKALNKVESNNKDKKSEQEEE 313
Score = 58 (25.5 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 39/209 (18%), Positives = 89/209 (42%)
Query: 309 LNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLIN--VYKREDLSDEAKEQ 366
L ++A V P ++ L + R +L ++T L++N + + +S+ A
Sbjct: 997 LGDLAFRFPNLVEPWTSKIYSRLRDPNADARKNSLMVLTHLILNDMIKVKGQISEMAICL 1056
Query: 367 RDEYLNVLLDHMHDVH-TFVRTKVLQLFQRL--VLDKAIPVAFTLKLLERAIGRLMDKSS 423
D ++ + ++ + + + +K L+ L ++ K P + L I + D
Sbjct: 1057 EDS--DIRISNIAKLFFSTLASKGNNLYNSLPDIIGKITPASTVTSNLNN-ISK--DSIK 1111
Query: 424 NVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILEN 483
N++KY ++ +S K ++ + ++ E ++ I C + L+ N
Sbjct: 1112 NILKYLFSFIEKDKQSETLIDKLLQRF--KTSKSISE-SQNISFCLQLLNY--------N 1160
Query: 484 FDTLYSMLTHFKSIEYKILHN-VYTKLLL 511
+L ++ HFK + K+ N +Y L++
Sbjct: 1161 DKSLKKLIEHFKLYQDKLNDNEIYNNLMI 1189
Score = 46 (21.3 bits), Expect = 1.6e-21, Sum P(4) = 1.6e-21
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 472 LDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRS--LKEFSSILDNFLSGDS 529
+ N+ + + + L S+ + E+ + T LRS LKE IL F + S
Sbjct: 705 ISNNNSSVVKDKVNLLVSIGLEEQDDEFLPRYTCITLQKLRSKGLKETDQILPRFKNNQS 764
Query: 530 LDEEL 534
L E L
Sbjct: 765 LFERL 769
Score = 42 (19.8 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 28/131 (21%), Positives = 56/131 (42%)
Query: 417 RLMDKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERIKDC----FEAL 472
RL D +++ K ++ +L +I ++ K + + LE+ + RI + F L
Sbjct: 1018 RLRDPNADARKNSLMVLTHLILNDMIKVKGQIS---EMAICLEDSDIRISNIAKLFFSTL 1074
Query: 473 DNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDE 532
+ G + + + +T ++ L+N+ +K S+K L +F+ D E
Sbjct: 1075 ASKGNN-LYNSLPDIIGKITPASTVTSN-LNNI-SK---DSIKNILKYLFSFIEKDKQSE 1128
Query: 533 ELQEKYLNVVK 543
L +K L K
Sbjct: 1129 TLIDKLLQRFK 1139
Score = 37 (18.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 415 IGRLMDKSSNVVKYTVQLLKTMIESN 440
+ + M SN + +QLL T++E +
Sbjct: 959 LSKFMCVDSNFCESNLQLLFTLLEKS 984
>POMBASE|SPBC776.13 [details] [associations]
symbol:cnd1 "condensin complex non-SMC subunit Cnd1"
species:4896 "Schizosaccharomyces pombe" [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 PomBase:SPBC776.13 GO:GO:0005737 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0007076 GO:GO:0000939
eggNOG:COG5098 KO:K06677 OMA:TERQHRD InterPro:IPR024324
PANTHER:PTHR14222 Pfam:PF12922 GO:GO:0000796 EMBL:AB030212
PIR:T43519 RefSeq:NP_596329.1 ProteinModelPortal:O94679
DIP:DIP-59184N STRING:O94679 EnsemblFungi:SPBC776.13.1
GeneID:2541201 KEGG:spo:SPBC776.13 HOGENOM:HOG000193429
OrthoDB:EOG4BK8BZ NextBio:20802313 Uniprot:O94679
Length = 1158
Score = 256 (95.2 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 80/390 (20%), Positives = 181/390 (46%)
Query: 60 DTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKM 119
+ L+++ +HF + + + VY LL ++ S+IL++ +S ++ D + + L
Sbjct: 58 EKLFAICSHFADLSSSVRNKVYD-LLTSNISSESAILEDMISANATDFTVPQTNLE---- 112
Query: 120 TLWVFTEFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIH 179
T + + +N L + W+ H++ L++I
Sbjct: 113 TTGIAFQLTVN---SLSSS-NQLSVIRSSTNTVKGRKKNPTTNSNWNGISHVNALLDAII 168
Query: 180 QILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRY 239
+ + K++++W + F+++ Y ++E ++K+ R +F I+G ++ +
Sbjct: 169 TLFQKKLSRVWTTSSERDMFLSLFLKPIYTLMESEI--NIKNASFRSRLFNIIGLAVQFH 226
Query: 240 NHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQ 299
NH + I+Q L+ EHL A V + +L I+R + ++E N+N +
Sbjct: 227 NHTTAAETNIIQNLQYFEHLSEYAADLVHIVTVQFNSVTLAEGIIRTLCSLEF-NDNDVK 285
Query: 300 DSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKRE-- 357
K +A FL +++ + + +L+ L+ ESY +R + ++ ++I+ E
Sbjct: 286 -GPKQVALFLVRLSSLIPNLCLKQLTQLVKLLDSESYTLRCAIIEVLANVVIDQIHDEAQ 344
Query: 358 -DLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLK---LLER 413
++S+ +++L + + D+ + RTKVL +F + + D +P+ + K + E
Sbjct: 345 NEMSESVPATVQSLMDLLSERLLDISPYCRTKVLHVFIK-IFD--LPIKYPRKRQEIAEL 401
Query: 414 AIGRLMDKSSNVVKYTVQLLKTMIESNPFA 443
I L D+SS+V + ++L ++ ++PF+
Sbjct: 402 VIRCLQDRSSHVRRNAIKLFSKLLTTHPFS 431
Score = 203 (76.5 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 65/333 (19%), Positives = 149/333 (44%)
Query: 485 DTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEFSSILDNFLSGDSLDEELQEKYLNVVKM 544
+ L+++ +HF + + + VY LL ++ S+IL++ +S ++ D + + L
Sbjct: 58 EKLFAICSHFADLSSSVRNKVYD-LLTSNISSESAILEDMISANATDFTVPQTNLE---- 112
Query: 545 TLWVFTEFIINFETRLQKDYHXXXXXXXXXXXXXXXXXXHNEKMQWDWDFHLSNGLNSIH 604
T + + +N L + W+ H++ L++I
Sbjct: 113 TTGIAFQLTVN---SLSSS-NQLSVIRSSTNTVKGRKKNPTTNSNWNGISHVNALLDAII 168
Query: 605 QILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRY 664
+ + K++++W + F+++ Y ++E ++K+ R +F I+G ++ +
Sbjct: 169 TLFQKKLSRVWTTSSERDMFLSLFLKPIYTLMESEI--NIKNASFRSRLFNIIGLAVQFH 226
Query: 665 NHGISCTVKIVQLLKNCEHLVSPLAQAVVMFIRNHGCKSLVREIVREISAMEDGNENAGQ 724
NH + I+Q L+ EHL A V + +L I+R + ++E N+N +
Sbjct: 227 NHTTAAETNIIQNLQYFEHLSEYAADLVHIVTVQFNSVTLAEGIIRTLCSLEF-NDNDVK 285
Query: 725 DSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELLINVYKRE-- 782
K +A FL +++ + + +L+ L+ ESY +R + ++ ++I+ E
Sbjct: 286 -GPKQVALFLVRLSSLIPNLCLKQLTQLVKLLDSESYTLRCAIIEVLANVVIDQIHDEAQ 344
Query: 783 -DLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKV 814
++S+ +++L + + D+ + RTKV
Sbjct: 345 NEMSESVPATVQSLMDLLSERLLDISPYCRTKV 377
Score = 63 (27.2 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 406 FTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERI 465
F ++ E RLMD+ S+V K L +I + K Q + A +LE+ + RI
Sbjct: 995 FIDEISEYLYRRLMDEESSVKKTCFMTLAFLILAGQIKVKG--QLGIMAR-SLEDEDARI 1051
Query: 466 KDC-------FEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYTKLLLRSLKEF 517
D F A DN + NF ++S+L+ +S E + + K ++R L F
Sbjct: 1052 SDLARMFFTDFAAKDNS----VYNNFIDIFSVLS--RSAEEQDEDDAKFKRIIRFLTSF 1104
Score = 44 (20.5 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 24/101 (23%), Positives = 43/101 (42%)
Query: 427 KYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDT 486
K + L +NP + T++Y + + ++F+E + E G +L F
Sbjct: 863 KADAERLAVQNSNNPINGQETSEYDLITGTSEDDFSEAMTFIRERELLYGENSLLSRFAP 922
Query: 487 LY-SMLTHFKSIEYKILHNVYTKLLLRSL--KEFSSILDNF 524
L + ++ KS HN + LL SL +F + +NF
Sbjct: 923 LVVELCSNHKS------HNNQSLLLAASLTLSKFMCLSNNF 957
Score = 43 (20.2 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 742 AEYV--IPAMEELLLNLEKESYL 762
+EYV +PA E + +NL K YL
Sbjct: 500 SEYVDSVPAEEIVKVNLTKRFYL 522
>CGD|CAL0001793 [details] [associations]
symbol:YCS4 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000939 "condensed chromosome
inner kinetochore" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0043007
"maintenance of rDNA" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0070058 "tRNA gene clustering"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 CGD:CAL0001793 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0007076 eggNOG:COG5098 KO:K06677 InterPro:IPR024324
PANTHER:PTHR14222 Pfam:PF12922 EMBL:AACQ01000133 EMBL:AACQ01000132
RefSeq:XP_713140.1 RefSeq:XP_713186.1 STRING:Q59U69 GeneID:3645154
GeneID:3645196 KEGG:cal:CaO19.1883 KEGG:cal:CaO19.9439
Uniprot:Q59U69
Length = 1172
Score = 190 (71.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 94/452 (20%), Positives = 191/452 (42%)
Query: 30 ELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM--LTH-FKSIEYKILHNVYTKLLL 86
++ + + +++ ++L N+ P + N + L + LTH F+ +E K H + L+
Sbjct: 19 QIEFSDVDSKLESITDSLANN-PESLNFNQELLEDLIELTHGFRELEEKKRHQL-AYLVT 76
Query: 87 RSLKEFSSILDN-FLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXXXXX 145
SL N F SGD D ++ +K TL + + L K+
Sbjct: 77 SSLNAVGQSYGNMFQSGDFHDN------VDTIKSTLERYGYLMFVLLKYLGKE-----DF 125
Query: 146 XXXXXXXXXXXXXHNEKMQWDWDF-HLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVA 204
+W + + NGL ++ +L ++K++ + FV + +
Sbjct: 126 SQVGNARSQKSVPREVSARWKSNCTEVENGLTAVITVLNLDLSKVFVTTPERDSFVELFS 185
Query: 205 NCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLA 264
++E P +K +++ IF+ + + ++ HG I+Q L HL +A
Sbjct: 186 RPIINLMESP--ERMKLVPIKLLIFRALCIAVTKHKHGSMLQHSIIQCLTYYAHLPQYMA 243
Query: 265 QAVVMFIRNHGCKSLVREIVREISAME-DGNENAGQDSSKMIAAFLNEVAAHGAEYVIPA 323
+ + L EI+REIS + N+ G K ++ FL +++ ++
Sbjct: 244 GLLHTLTEKYDYMVLTEEILREISQTHFNSNDTNGP---KAVSEFLIKLSELSPRLILRQ 300
Query: 324 MEELLLNLEKESYLMRNCTLT-----IVTELLINVYKREDLSDEA---KEQRDEYLNVLL 375
M + L+ + +R C++ IV ++L N + + ++A + Q + LN+L
Sbjct: 301 MTSISQLLDNSNQTLR-CSVVEACGNIVVDILKNSTRDQGEDEDADYYRHQVAKLLNLLE 359
Query: 376 DHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKT 435
+ D + +VRTK Q ++ K K++ A+ L D+S+ V + ++L+
Sbjct: 360 ERFLDQNPYVRTKAFQALSKVADLKVKLTERRQKMMMLAVRSLEDRSTLVRRNAIKLMSK 419
Query: 436 MIESNPFAAKATTQYYVQAELTLEEFNERIKD 467
+I ++ F TQ L L + +++KD
Sbjct: 420 LILNHQFQGSHGTQ------LALTFWKQKLKD 445
Score = 150 (57.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 77/373 (20%), Positives = 156/373 (41%)
Query: 455 ELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM--LTH-FKSIEYKILHNVYTKLLL 511
++ + + +++ ++L N+ P + N + L + LTH F+ +E K H + L+
Sbjct: 19 QIEFSDVDSKLESITDSLANN-PESLNFNQELLEDLIELTHGFRELEEKKRHQL-AYLVT 76
Query: 512 RSLKEFSSILDN-FLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXXXXX 570
SL N F SGD D ++ +K TL + + L K+
Sbjct: 77 SSLNAVGQSYGNMFQSGDFHDN------VDTIKSTLERYGYLMFVLLKYLGKE-----DF 125
Query: 571 XXXXXXXXXXXXXHNEKMQWDWDF-HLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVA 629
+W + + NGL ++ +L ++K++ + FV + +
Sbjct: 126 SQVGNARSQKSVPREVSARWKSNCTEVENGLTAVITVLNLDLSKVFVTTPERDSFVELFS 185
Query: 630 NCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLA 689
++E P +K +++ IF+ + + ++ HG I+Q L HL +A
Sbjct: 186 RPIINLMESP--ERMKLVPIKLLIFRALCIAVTKHKHGSMLQHSIIQCLTYYAHLPQYMA 243
Query: 690 QAVVMFIRNHGCKSLVREIVREISAME-DGNENAGQDSSKMIAAFLNEVAAHGAEYVIPA 748
+ + L EI+REIS + N+ G K ++ FL +++ ++
Sbjct: 244 GLLHTLTEKYDYMVLTEEILREISQTHFNSNDTNGP---KAVSEFLIKLSELSPRLILRQ 300
Query: 749 MEELLLNLEKESYLMRNCTLT-----IVTELLINVYKREDLSDEA---KEQRDEYLNVLL 800
M + L+ + +R C++ IV ++L N + + ++A + Q + LN+L
Sbjct: 301 MTSISQLLDNSNQTLR-CSVVEACGNIVVDILKNSTRDQGEDEDADYYRHQVAKLLNLLE 359
Query: 801 DHMHDVHTFVRTK 813
+ D + +VRTK
Sbjct: 360 ERFLDQNPYVRTK 372
Score = 38 (18.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 753 LLNLEKESYLMRNCTLTI--VTELLINVYKREDLSDEAKEQR 792
L +LEK LM + V +L +Y D S+E + Q+
Sbjct: 661 LASLEKLLGLMYAAMMINFEVINVLWQIYNLSDRSEEVRRQK 702
>UNIPROTKB|Q59U69 [details] [associations]
symbol:YCS4 "Potential nuclear condensin complex subunit D"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
CGD:CAL0001793 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076 eggNOG:COG5098
KO:K06677 InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713140.1
RefSeq:XP_713186.1 STRING:Q59U69 GeneID:3645154 GeneID:3645196
KEGG:cal:CaO19.1883 KEGG:cal:CaO19.9439 Uniprot:Q59U69
Length = 1172
Score = 190 (71.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 94/452 (20%), Positives = 191/452 (42%)
Query: 30 ELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM--LTH-FKSIEYKILHNVYTKLLL 86
++ + + +++ ++L N+ P + N + L + LTH F+ +E K H + L+
Sbjct: 19 QIEFSDVDSKLESITDSLANN-PESLNFNQELLEDLIELTHGFRELEEKKRHQL-AYLVT 76
Query: 87 RSLKEFSSILDN-FLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXXXXX 145
SL N F SGD D ++ +K TL + + L K+
Sbjct: 77 SSLNAVGQSYGNMFQSGDFHDN------VDTIKSTLERYGYLMFVLLKYLGKE-----DF 125
Query: 146 XXXXXXXXXXXXXHNEKMQWDWDF-HLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVA 204
+W + + NGL ++ +L ++K++ + FV + +
Sbjct: 126 SQVGNARSQKSVPREVSARWKSNCTEVENGLTAVITVLNLDLSKVFVTTPERDSFVELFS 185
Query: 205 NCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLA 264
++E P +K +++ IF+ + + ++ HG I+Q L HL +A
Sbjct: 186 RPIINLMESP--ERMKLVPIKLLIFRALCIAVTKHKHGSMLQHSIIQCLTYYAHLPQYMA 243
Query: 265 QAVVMFIRNHGCKSLVREIVREISAME-DGNENAGQDSSKMIAAFLNEVAAHGAEYVIPA 323
+ + L EI+REIS + N+ G K ++ FL +++ ++
Sbjct: 244 GLLHTLTEKYDYMVLTEEILREISQTHFNSNDTNGP---KAVSEFLIKLSELSPRLILRQ 300
Query: 324 MEELLLNLEKESYLMRNCTLT-----IVTELLINVYKREDLSDEA---KEQRDEYLNVLL 375
M + L+ + +R C++ IV ++L N + + ++A + Q + LN+L
Sbjct: 301 MTSISQLLDNSNQTLR-CSVVEACGNIVVDILKNSTRDQGEDEDADYYRHQVAKLLNLLE 359
Query: 376 DHMHDVHTFVRTKVLQLFQRLVLDKAIPVAFTLKLLERAIGRLMDKSSNVVKYTVQLLKT 435
+ D + +VRTK Q ++ K K++ A+ L D+S+ V + ++L+
Sbjct: 360 ERFLDQNPYVRTKAFQALSKVADLKVKLTERRQKMMMLAVRSLEDRSTLVRRNAIKLMSK 419
Query: 436 MIESNPFAAKATTQYYVQAELTLEEFNERIKD 467
+I ++ F TQ L L + +++KD
Sbjct: 420 LILNHQFQGSHGTQ------LALTFWKQKLKD 445
Score = 150 (57.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 77/373 (20%), Positives = 156/373 (41%)
Query: 455 ELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM--LTH-FKSIEYKILHNVYTKLLL 511
++ + + +++ ++L N+ P + N + L + LTH F+ +E K H + L+
Sbjct: 19 QIEFSDVDSKLESITDSLANN-PESLNFNQELLEDLIELTHGFRELEEKKRHQL-AYLVT 76
Query: 512 RSLKEFSSILDN-FLSGDSLDEELQEKYLNVVKMTLWVFTEFIINFETRLQKDYHXXXXX 570
SL N F SGD D ++ +K TL + + L K+
Sbjct: 77 SSLNAVGQSYGNMFQSGDFHDN------VDTIKSTLERYGYLMFVLLKYLGKE-----DF 125
Query: 571 XXXXXXXXXXXXXHNEKMQWDWDF-HLSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVA 629
+W + + NGL ++ +L ++K++ + FV + +
Sbjct: 126 SQVGNARSQKSVPREVSARWKSNCTEVENGLTAVITVLNLDLSKVFVTTPERDSFVELFS 185
Query: 630 NCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHGISCTVKIVQLLKNCEHLVSPLA 689
++E P +K +++ IF+ + + ++ HG I+Q L HL +A
Sbjct: 186 RPIINLMESP--ERMKLVPIKLLIFRALCIAVTKHKHGSMLQHSIIQCLTYYAHLPQYMA 243
Query: 690 QAVVMFIRNHGCKSLVREIVREISAME-DGNENAGQDSSKMIAAFLNEVAAHGAEYVIPA 748
+ + L EI+REIS + N+ G K ++ FL +++ ++
Sbjct: 244 GLLHTLTEKYDYMVLTEEILREISQTHFNSNDTNGP---KAVSEFLIKLSELSPRLILRQ 300
Query: 749 MEELLLNLEKESYLMRNCTLT-----IVTELLINVYKREDLSDEA---KEQRDEYLNVLL 800
M + L+ + +R C++ IV ++L N + + ++A + Q + LN+L
Sbjct: 301 MTSISQLLDNSNQTLR-CSVVEACGNIVVDILKNSTRDQGEDEDADYYRHQVAKLLNLLE 359
Query: 801 DHMHDVHTFVRTK 813
+ D + +VRTK
Sbjct: 360 ERFLDQNPYVRTK 372
Score = 38 (18.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 753 LLNLEKESYLMRNCTLTI--VTELLINVYKREDLSDEAKEQR 792
L +LEK LM + V +L +Y D S+E + Q+
Sbjct: 661 LASLEKLLGLMYAAMMINFEVINVLWQIYNLSDRSEEVRRQK 702
>UNIPROTKB|F5GZK7 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9606
"Homo sapiens" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0045120 "pronucleus" evidence=IEA] InterPro:IPR026971
GO:GO:0000793 GO:GO:0007076 GO:GO:0045120 EMBL:AC006064
HGNC:HGNC:24305 ChiTaRS:NCAPD2 PANTHER:PTHR14222 IPI:IPI00944455
Ensembl:ENST00000539714 ArrayExpress:F5GZK7 Bgee:F5GZK7
Uniprot:F5GZK7
Length = 118
Score = 145 (56.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 36/108 (33%), Positives = 61/108 (56%)
Query: 6 EFVIPSSKDELLEKQATTQYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSM 65
EF +P S +ELL+ QY VQ L+++ +++ A GP+ +L++FDT+YS+
Sbjct: 7 EFHLPLSPEELLKSGGVNQYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYSI 66
Query: 66 LTHFKSIEYKILHNVYT---KLLLRSLKEFSSILDNF-LSGDSLDEEL 109
L HF+SI+ + + K++ R +E +ILD+ LSG + L
Sbjct: 67 LHHFRSIDPGLKEDTLQFLIKVVSRHSQELPAILDDTTLSGSDRNAHL 114
Score = 113 (44.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/90 (32%), Positives = 51/90 (56%)
Query: 449 QYYVQAELTLEEFNERIKDCFEALDNDGPMFILENFDTLYSMLTHFKSIEYKILHNVYT- 507
QY VQ L+++ +++ A GP+ +L++FDT+YS+L HF+SI+ + +
Sbjct: 25 QYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYSILHHFRSIDPGLKEDTLQF 84
Query: 508 --KLLLRSLKEFSSILDNF-LSGDSLDEEL 534
K++ R +E +ILD+ LSG + L
Sbjct: 85 LIKVVSRHSQELPAILDDTTLSGSDRNAHL 114
>SGD|S000004262 [details] [associations]
symbol:YCS4 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0007076 "mitotic chromosome
condensation" evidence=IEA;IMP;TAS;IPI] [GO:0005694 "chromosome"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0070058 "tRNA gene clustering"
evidence=IMP] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0000799 "nuclear condensin complex" evidence=TAS;IPI]
[GO:0043007 "maintenance of rDNA" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
SGD:S000004262 SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 EMBL:BK006945 GO:GO:0030466
GO:GO:0007076 EMBL:U17244 eggNOG:COG5098 KO:K06677 OMA:TERQHRD
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 HOGENOM:HOG000193429 OrthoDB:EOG4BK8BZ
EMBL:U17245 PIR:S51408 RefSeq:NP_013374.1 ProteinModelPortal:Q06156
IntAct:Q06156 MINT:MINT-2492197 STRING:Q06156 PaxDb:Q06156
PeptideAtlas:Q06156 EnsemblFungi:YLR272C GeneID:850977
KEGG:sce:YLR272C CYGD:YLR272c NextBio:967484 Genevestigator:Q06156
GermOnline:YLR272C GO:GO:0000799 GO:GO:0043007 GO:GO:0010032
GO:GO:0070058 Uniprot:Q06156
Length = 1176
Score = 156 (60.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 66/301 (21%), Positives = 137/301 (45%)
Query: 171 LSNGLNSIHQILKSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQ 230
+ N L SI ++L+ ++K++ ++ F+ + + ++E + V L++FI +
Sbjct: 164 MENLLESITKLLEINLSKIFQTTPEKDLFIGLFTRPLFVLLEIEPVTKVS--SLKMFIQR 221
Query: 231 IVGYLIKRYNHGISCTVKIVQLLKNCE---HLVSPLAQAVVMFIRNHGCKSLVREIVREI 287
I+ +K NHG S +++ L+ N HL A+ + + + L +I++EI
Sbjct: 222 ILAMCVK--NHGQSSSIQS-SLMTNLTYFLHLSVFNAELLKLLNDEYNYPQLTEDILKEI 278
Query: 288 SA-MEDGNENAGQDSSKMIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIV 346
S + + + G K I+ FL +++ ++ M ++ L S +R +
Sbjct: 279 STRVFNAKDTTGP---KAISNFLIKLSELSPGIMLRQMNLVITLLNNSSITLRCSVVEAC 335
Query: 347 TELLINVYKREDLSDEAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLV-LDKAIPVA 405
++ + + + K+Q + +L + D + +VRTK +Q ++ L +
Sbjct: 336 GNIVAELAQDPQTMEHYKQQIAVLIELLEERFQDSNPYVRTKAIQGCSKICDLSSKFNKS 395
Query: 406 FTLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESNPFAAKATTQYYVQAELTLEEFNERI 465
K A+ L D+SS V + +V+LL ++ +PF A +Q L L E+ E +
Sbjct: 396 -KAKFTSLAVRSLQDRSSLVRRNSVKLLSKLLLKHPFKAIHGSQ------LRLSEWEEYL 448
Query: 466 K 466
K
Sbjct: 449 K 449
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 710 REISAMEDGNENAGQDSSKMIAAFLNEVAAHGAEYVI----PAMEELLLNLEKESYLMRN 765
+E+ + NE+ D+ + + NE+ G + ++ P +EE++ N + S M
Sbjct: 900 KELEMIGGTNEDDFTDAIQFVKE--NELL-FGEKSILGKFCPIVEEIVSNSSRFSDPMLQ 956
Query: 766 CTLTIVTELLI 776
T T+ E L+
Sbjct: 957 RTATLCLEKLM 967
>WB|WBGene00001087 [details] [associations]
symbol:dpy-28 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0046536 "dosage
compensation complex" evidence=IPI] [GO:0000805 "X chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0043073
"germ cell nucleus" evidence=IDA] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IMP] [GO:0045144
"meiotic sister chromatid segregation" evidence=IMP] [GO:0000070
"mitotic sister chromatid segregation" evidence=IMP]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0009792 GO:GO:0040010 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0010171 GO:GO:0040011 GO:GO:0000070 GO:GO:0000794
GO:GO:0007076 GO:GO:0045128 GO:GO:0045144 GO:GO:0000805 KO:K06677
PANTHER:PTHR14222 GeneTree:ENSGT00390000017108 GO:GO:0043073
GO:GO:0046536 EMBL:AL021482 PIR:C88589 PIR:T26747
RefSeq:NP_499379.2 ProteinModelPortal:Q9U2M1 SMR:Q9U2M1
STRING:Q9U2M1 EnsemblMetazoa:Y39A1B.3 GeneID:176509
KEGG:cel:CELE_Y39A1B.3 UCSC:Y39A1B.3 CTD:176509 WormBase:Y39A1B.3
HOGENOM:HOG000076991 InParanoid:Q9U2M1 OMA:MENRRIP NextBio:892880
Uniprot:Q9U2M1
Length = 1499
Score = 131 (51.2 bits), Expect = 0.00024, P = 0.00024
Identities = 59/274 (21%), Positives = 122/274 (44%)
Query: 183 KSKINKLWDPPVVEEEFVNMVANCCYKIIEDPCIASVKHKELRVFIFQIVGYLIKRYNHG 242
K I ++ P V+E++F+ + +++EDP + ++ F+I+ L Y
Sbjct: 228 KKAIQYVFAPDVMEKDFLLRFLDTVVQLLEDPENMARSSQQWISHYFRILKVLSADYGMT 287
Query: 243 ISCTVKIVQLLKNCEHLVS----PLAQAVVMFIRNHGCKS-LVREIVREISAM---EDGN 294
+ L + +L + P + +V ++ +G S + + +R + + GN
Sbjct: 288 KDVANCLFTALSH-SYLEAANTFPFIEPLVTLMKENGEGSGRIYQPLRNVLQLVICRVGN 346
Query: 295 ENAGQDSSK----MIAAFLNEVAAHGAEYVIPAMEELLLNLEKESYLMRNCTLTIVTELL 350
AG+ + K + +A + + ++ + + L+ + +R TL + ++
Sbjct: 347 LYAGERAEKPPPKAFCMMVQSLAINVHDLMLQDITHVYRLLQNQHVNVRMSTLHALADMF 406
Query: 351 INVYKREDLSD---EAKEQRDEYLNVLLDHMHDVHTFVRTKVLQLFQRLVLDKAIPVAF- 406
+ Y + L D + +R+ LL H +D T VR+K + L + ++ ++ IP F
Sbjct: 407 SSSYLSQSLCDTFASRRLKREGIFKRLLAHTNDEATNVRSKAVSLLRNIMENRRIPEEFE 466
Query: 407 TLKLLERAIGRLMDKSSNVVKYTVQLLKTMIESN 440
+ LL RL DKS V K +Q L T +++N
Sbjct: 467 SCGLLSIVGSRLNDKSVQVRKSAIQFLTTFLDNN 500
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 827 791 0.00096 121 3 11 22 0.36 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 621 (66 KB)
Total size of DFA: 386 KB (2181 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.03u 0.15s 69.18t Elapsed: 00:00:03
Total cpu time: 69.04u 0.15s 69.19t Elapsed: 00:00:03
Start: Thu Aug 15 17:08:13 2013 End: Thu Aug 15 17:08:16 2013