Query psy8190
Match_columns 348
No_of_seqs 282 out of 2493
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 20:55:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r30_A Biotin synthase; SAM ra 100.0 1.5E-50 5.1E-55 383.5 36.1 315 25-339 26-340 (369)
2 3t7v_A Methylornithine synthas 100.0 8.4E-51 2.9E-55 382.7 29.5 309 21-339 15-343 (350)
3 3iix_A Biotin synthetase, puta 100.0 5.6E-46 1.9E-50 349.5 35.8 309 21-338 8-338 (348)
4 1olt_A Oxygen-independent copr 99.9 3E-27 1E-31 229.3 14.7 239 67-312 56-337 (457)
5 2qgq_A Protein TM_1862; alpha- 99.9 3.7E-26 1.3E-30 210.4 19.7 198 66-270 6-218 (304)
6 1tv8_A MOAA, molybdenum cofact 99.8 3E-18 1E-22 160.0 22.4 206 56-271 8-222 (340)
7 3c8f_A Pyruvate formate-lyase 99.8 7.5E-18 2.5E-22 149.4 19.6 194 72-274 26-238 (245)
8 2yx0_A Radical SAM enzyme; pre 99.8 6.4E-18 2.2E-22 157.9 18.5 203 73-281 79-311 (342)
9 2z2u_A UPF0026 protein MJ0257; 99.7 4.5E-16 1.5E-20 143.4 13.0 204 59-274 46-282 (311)
10 3rfa_A Ribosomal RNA large sub 99.6 1.3E-13 4.5E-18 130.0 19.8 198 72-284 122-346 (404)
11 2a5h_A L-lysine 2,3-aminomutas 99.5 3.8E-13 1.3E-17 128.4 17.6 192 66-278 117-321 (416)
12 3can_A Pyruvate-formate lyase- 99.0 1.1E-08 3.9E-13 86.2 15.7 153 116-275 5-174 (182)
13 2cw6_A Hydroxymethylglutaryl-C 98.6 3.9E-06 1.3E-10 76.3 18.5 220 98-334 24-265 (298)
14 4fhd_A Spore photoproduct lyas 98.5 2.1E-07 7.3E-12 86.2 7.1 161 68-233 111-282 (368)
15 1ydn_A Hydroxymethylglutaryl-C 98.4 2.4E-05 8.3E-10 70.9 18.9 220 98-334 23-264 (295)
16 2ftp_A Hydroxymethylglutaryl-C 98.3 0.0001 3.6E-09 66.9 20.8 221 97-334 26-268 (302)
17 1ydo_A HMG-COA lyase; TIM-barr 98.3 0.00012 4.1E-09 66.6 20.2 221 97-334 24-266 (307)
18 3ble_A Citramalate synthase fr 98.2 0.00019 6.5E-09 66.2 19.5 216 98-334 38-273 (337)
19 3ewb_X 2-isopropylmalate synth 97.8 0.0017 5.9E-08 58.5 19.0 217 97-333 23-259 (293)
20 1nvm_A HOA, 4-hydroxy-2-oxoval 97.8 0.0013 4.3E-08 60.8 18.6 209 98-334 27-253 (345)
21 3eeg_A 2-isopropylmalate synth 97.6 0.0036 1.2E-07 57.2 17.9 217 97-333 24-260 (325)
22 3rmj_A 2-isopropylmalate synth 97.6 0.0042 1.4E-07 57.8 18.3 218 97-334 30-267 (370)
23 1rqb_A Transcarboxylase 5S sub 97.5 0.0016 5.6E-08 63.3 15.0 211 98-334 44-279 (539)
24 3bg3_A Pyruvate carboxylase, m 97.5 0.0086 2.9E-07 60.3 20.1 209 98-334 122-364 (718)
25 2nx9_A Oxaloacetate decarboxyl 97.4 0.0051 1.7E-07 58.9 16.6 211 98-334 27-260 (464)
26 1h5y_A HISF; histidine biosynt 97.4 0.007 2.4E-07 52.7 15.8 205 100-334 32-251 (253)
27 3ivs_A Homocitrate synthase, m 97.3 0.011 3.7E-07 55.8 16.8 188 97-306 57-252 (423)
28 3lot_A Uncharacterized protein 97.0 0.062 2.1E-06 48.5 18.5 228 95-336 26-296 (314)
29 2ztj_A Homocitrate synthase; ( 96.9 0.086 2.9E-06 49.2 18.9 186 97-306 21-218 (382)
30 1eye_A DHPS 1, dihydropteroate 96.8 0.061 2.1E-06 47.8 16.5 157 61-235 5-200 (280)
31 3inp_A D-ribulose-phosphate 3- 96.8 0.048 1.7E-06 47.5 15.3 182 98-312 37-226 (246)
32 3e49_A Uncharacterized protein 96.8 0.22 7.6E-06 44.8 19.8 229 94-336 25-293 (311)
33 3k13_A 5-methyltetrahydrofolat 96.6 0.38 1.3E-05 43.1 21.2 195 98-309 34-254 (300)
34 2yci_X 5-methyltetrahydrofolat 96.5 0.16 5.3E-06 45.0 16.9 113 98-228 31-149 (271)
35 3e02_A Uncharacterized protein 96.4 0.5 1.7E-05 42.5 22.1 229 95-336 26-293 (311)
36 2dqw_A Dihydropteroate synthas 96.4 0.081 2.8E-06 47.3 14.3 136 98-235 49-220 (294)
37 1thf_D HISF protein; thermophI 96.4 0.19 6.6E-06 43.6 16.6 205 104-335 33-249 (253)
38 1aj0_A DHPS, dihydropteroate s 96.2 0.12 4E-06 46.0 14.2 136 98-235 35-208 (282)
39 3ctl_A D-allulose-6-phosphate 96.2 0.2 6.7E-06 43.3 15.2 181 99-314 11-201 (231)
40 3tr9_A Dihydropteroate synthas 96.1 0.23 7.8E-06 44.7 15.5 135 98-234 46-224 (314)
41 3ovp_A Ribulose-phosphate 3-ep 96.0 0.14 4.7E-06 44.1 13.4 181 99-312 15-200 (228)
42 2qf7_A Pyruvate carboxylase pr 96.0 0.16 5.5E-06 54.2 16.6 208 98-334 570-811 (1165)
43 2y5s_A DHPS, dihydropteroate s 95.9 0.12 4.1E-06 46.3 12.9 157 61-235 22-217 (294)
44 4hb7_A Dihydropteroate synthas 95.9 0.49 1.7E-05 41.5 16.5 156 61-234 6-192 (270)
45 1f6y_A 5-methyltetrahydrofolat 95.9 0.81 2.8E-05 40.2 18.2 189 98-309 22-229 (262)
46 2wqp_A Polysialic acid capsule 95.9 0.76 2.6E-05 42.0 18.3 177 99-306 33-233 (349)
47 3no5_A Uncharacterized protein 95.9 0.87 3E-05 40.2 21.3 223 95-336 24-264 (275)
48 2y7e_A 3-keto-5-aminohexanoate 95.8 0.95 3.2E-05 40.1 21.0 222 97-335 30-269 (282)
49 1tx2_A DHPS, dihydropteroate s 95.7 0.26 9E-06 44.1 14.3 136 98-235 60-227 (297)
50 2vef_A Dihydropteroate synthas 95.7 0.4 1.4E-05 43.3 15.5 157 60-234 8-223 (314)
51 1vli_A Spore coat polysacchari 95.4 0.56 1.9E-05 43.4 15.4 177 99-306 42-245 (385)
52 3qja_A IGPS, indole-3-glycerol 95.2 1.5 5E-05 38.7 20.6 192 104-337 75-268 (272)
53 1ka9_F Imidazole glycerol phos 95.1 1.5 5E-05 37.9 18.5 206 102-334 32-249 (252)
54 2vp8_A Dihydropteroate synthas 95.1 0.22 7.5E-06 45.0 11.6 157 60-234 40-239 (318)
55 1qwg_A PSL synthase;, (2R)-pho 95.0 1.3 4.3E-05 38.4 15.5 130 98-243 23-167 (251)
56 1tqj_A Ribulose-phosphate 3-ep 94.9 0.19 6.7E-06 43.2 10.5 194 99-328 15-218 (230)
57 3chv_A Prokaryotic domain of u 94.9 1.9 6.6E-05 38.1 21.8 219 97-335 30-267 (284)
58 3c6c_A 3-keto-5-aminohexanoate 94.8 2.1 7.2E-05 38.5 20.4 224 94-335 41-301 (316)
59 3hq1_A 2-isopropylmalate synth 94.8 0.51 1.7E-05 46.7 14.0 224 97-334 89-338 (644)
60 2bdq_A Copper homeostasis prot 94.5 0.22 7.4E-06 42.5 9.5 138 99-256 74-219 (224)
61 1h1y_A D-ribulose-5-phosphate 94.5 0.78 2.7E-05 39.2 13.3 182 99-313 17-205 (228)
62 3dxi_A Putative aldolase; TIM 94.4 0.73 2.5E-05 41.7 13.5 198 98-329 21-240 (320)
63 1x7f_A Outer surface protein; 94.1 1.6 5.4E-05 40.4 15.1 146 99-274 39-195 (385)
64 1vzw_A Phosphoribosyl isomeras 94.0 1.9 6.4E-05 37.0 14.9 181 102-312 33-225 (244)
65 3mcm_A 2-amino-4-hydroxy-6-hyd 93.9 0.82 2.8E-05 43.1 12.9 155 59-231 188-385 (442)
66 3cu2_A Ribulose-5-phosphate 3- 93.9 0.16 5.6E-06 44.0 7.6 192 99-328 24-233 (237)
67 2bmb_A Folic acid synthesis pr 93.9 2.4 8.3E-05 41.0 16.4 137 99-235 247-459 (545)
68 2y88_A Phosphoribosyl isomeras 93.7 1.1 3.9E-05 38.4 12.9 71 102-177 32-105 (244)
69 1qop_A Tryptophan synthase alp 93.7 1.9 6.6E-05 37.7 14.5 185 99-312 29-237 (268)
70 2p10_A MLL9387 protein; putati 93.3 1.5 5.1E-05 38.6 12.7 188 133-334 79-285 (286)
71 4e38_A Keto-hydroxyglutarate-a 93.2 1.7 5.9E-05 37.2 12.9 162 97-312 42-205 (232)
72 3vnd_A TSA, tryptophan synthas 93.1 2.3 7.8E-05 37.3 13.9 184 99-311 30-237 (267)
73 3f4w_A Putative hexulose 6 pho 93.0 1.1 3.7E-05 37.6 11.3 178 98-313 10-191 (211)
74 2w6r_A Imidazole glycerol phos 93.0 0.64 2.2E-05 40.6 10.2 71 104-176 33-104 (266)
75 1rd5_A Tryptophan synthase alp 92.9 2.2 7.5E-05 37.1 13.6 181 100-312 31-233 (262)
76 4i6k_A Amidohydrolase family p 92.7 5 0.00017 35.3 17.3 221 98-346 53-286 (294)
77 3hbl_A Pyruvate carboxylase; T 92.1 5.1 0.00018 42.7 17.2 206 98-334 552-794 (1150)
78 3tsm_A IGPS, indole-3-glycerol 92.1 5.9 0.0002 34.8 20.2 172 98-312 79-252 (272)
79 1tqx_A D-ribulose-5-phosphate 92.0 0.53 1.8E-05 40.4 8.1 183 98-313 15-205 (227)
80 4af0_A Inosine-5'-monophosphat 91.9 0.95 3.3E-05 43.6 10.4 119 101-228 280-403 (556)
81 2p0o_A Hypothetical protein DU 91.9 0.62 2.1E-05 42.9 8.8 78 99-176 15-100 (372)
82 2v82_A 2-dehydro-3-deoxy-6-pho 91.2 5.8 0.0002 33.0 17.4 164 97-314 15-181 (212)
83 3gnh_A L-lysine, L-arginine ca 91.0 3.7 0.00013 37.5 13.4 82 98-181 164-253 (403)
84 3lab_A Putative KDPG (2-keto-3 90.7 3.8 0.00013 34.7 11.9 163 96-312 20-190 (217)
85 3g8r_A Probable spore coat pol 90.5 10 0.00034 34.6 18.7 146 130-306 75-222 (350)
86 1mxs_A KDPG aldolase; 2-keto-3 90.5 7.5 0.00025 33.0 15.8 158 98-312 35-197 (225)
87 2fli_A Ribulose-phosphate 3-ep 90.1 2.4 8.1E-05 35.6 10.4 194 98-327 13-214 (220)
88 3khj_A Inosine-5-monophosphate 90.0 11 0.00039 34.4 17.6 154 131-312 79-239 (361)
89 1geq_A Tryptophan synthase alp 89.6 8.9 0.00031 32.7 17.0 183 99-312 17-223 (248)
90 1rpx_A Protein (ribulose-phosp 89.4 4.6 0.00016 34.2 11.8 182 98-313 20-211 (230)
91 1jub_A Dihydroorotate dehydrog 89.3 11 0.00039 33.3 15.2 193 132-333 76-299 (311)
92 3nvt_A 3-deoxy-D-arabino-heptu 89.2 14 0.00047 34.2 18.8 186 99-312 154-349 (385)
93 1twd_A Copper homeostasis prot 88.7 2.9 0.0001 36.2 9.8 122 99-244 71-198 (256)
94 3ajx_A 3-hexulose-6-phosphate 88.3 9.7 0.00033 31.4 18.1 175 98-313 10-190 (207)
95 1q7z_A 5-methyltetrahydrofolat 88.0 21 0.0007 34.8 17.5 186 98-310 337-539 (566)
96 2h9a_B CO dehydrogenase/acetyl 87.9 9 0.00031 34.3 12.9 131 101-233 74-229 (310)
97 1vc4_A Indole-3-glycerol phosp 87.8 13 0.00044 32.2 16.9 174 102-312 66-239 (254)
98 1m5w_A Pyridoxal phosphate bio 87.7 1.4 4.8E-05 37.7 7.0 117 100-223 76-202 (243)
99 3oa3_A Aldolase; structural ge 87.6 4.5 0.00015 35.8 10.5 86 98-186 185-272 (288)
100 3tdn_A FLR symmetric alpha-bet 87.6 1.3 4.5E-05 38.2 7.1 73 103-177 37-110 (247)
101 2r8c_A Putative amidohydrolase 87.5 3 0.0001 38.7 10.1 83 98-182 172-262 (426)
102 3b0p_A TRNA-dihydrouridine syn 87.4 17 0.00057 33.1 15.3 141 160-309 75-225 (350)
103 3r12_A Deoxyribose-phosphate a 87.4 4.9 0.00017 35.0 10.5 75 97-173 169-243 (260)
104 4gj1_A 1-(5-phosphoribosyl)-5- 87.4 0.94 3.2E-05 39.2 6.0 176 104-310 34-225 (243)
105 3o63_A Probable thiamine-phosp 87.4 13 0.00045 31.9 14.4 167 103-312 45-222 (243)
106 2ekc_A AQ_1548, tryptophan syn 87.1 14 0.00049 32.0 20.9 184 99-312 29-237 (262)
107 3ngj_A Deoxyribose-phosphate a 86.6 3.4 0.00012 35.5 8.9 74 98-173 154-227 (239)
108 3q94_A Fructose-bisphosphate a 86.1 11 0.00036 33.4 12.1 121 109-243 98-235 (288)
109 3ndo_A Deoxyribose-phosphate a 85.6 7.1 0.00024 33.3 10.4 74 99-173 144-217 (231)
110 2yw3_A 4-hydroxy-2-oxoglutarat 85.6 15 0.0005 30.7 17.4 163 98-314 22-184 (207)
111 1ub3_A Aldolase protein; schif 85.6 6.3 0.00022 33.4 10.1 85 98-186 130-214 (220)
112 3pm6_A Putative fructose-bisph 85.4 14 0.00048 32.9 12.5 119 114-243 113-250 (306)
113 1z41_A YQJM, probable NADH-dep 85.4 3.6 0.00012 37.3 9.1 78 98-175 226-307 (338)
114 3n9r_A Fructose-bisphosphate a 85.3 16 0.00055 32.5 12.9 87 109-196 92-197 (307)
115 3gr7_A NADPH dehydrogenase; fl 84.9 3.3 0.00011 37.7 8.5 77 99-175 227-307 (340)
116 3fst_A 5,10-methylenetetrahydr 84.6 14 0.00048 32.9 12.4 105 98-217 94-211 (304)
117 3feq_A Putative amidohydrolase 84.6 2.6 9E-05 38.8 8.0 82 98-181 169-258 (423)
118 4gxw_A Adenosine deaminase; am 84.5 4.4 0.00015 37.4 9.3 79 97-178 161-245 (380)
119 1mzh_A Deoxyribose-phosphate a 84.2 7.5 0.00026 32.9 10.1 74 98-173 129-202 (225)
120 1u83_A Phosphosulfolactate syn 84.2 18 0.0006 31.6 12.3 125 98-241 50-189 (276)
121 1zco_A 2-dehydro-3-deoxyphosph 84.1 14 0.00048 32.1 11.9 200 99-329 35-254 (262)
122 3fa4_A 2,3-dimethylmalate lyas 83.8 23 0.00079 31.5 14.2 155 152-309 22-190 (302)
123 4djd_D C/Fe-SP, corrinoid/iron 83.5 18 0.00062 32.5 12.6 134 100-233 79-236 (323)
124 1hg3_A Triosephosphate isomera 83.3 20 0.00068 30.4 16.8 128 161-312 81-208 (225)
125 3vzx_A Heptaprenylglyceryl pho 82.9 12 0.0004 31.9 10.6 70 98-175 137-208 (228)
126 3sr7_A Isopentenyl-diphosphate 82.9 16 0.00053 33.5 12.2 156 159-333 159-343 (365)
127 1vcv_A Probable deoxyribose-ph 82.1 22 0.00077 30.1 14.0 184 98-304 14-211 (226)
128 1ydn_A Hydroxymethylglutaryl-C 81.9 26 0.0009 30.7 13.9 123 98-234 152-281 (295)
129 3lmz_A Putative sugar isomeras 81.8 12 0.0004 31.9 10.6 65 135-209 32-105 (257)
130 1vcv_A Probable deoxyribose-ph 81.8 11 0.00037 32.1 10.0 73 98-170 125-211 (226)
131 2w6r_A Imidazole glycerol phos 81.4 5.8 0.0002 34.3 8.5 65 107-175 162-229 (266)
132 1w0m_A TIM, triosephosphate is 81.4 24 0.00081 29.9 13.2 129 161-313 78-206 (226)
133 3hgj_A Chromate reductase; TIM 81.1 6.8 0.00023 35.7 9.1 77 99-175 237-318 (349)
134 1ka9_F Imidazole glycerol phos 80.7 5.7 0.0002 34.0 8.1 90 107-210 158-250 (252)
135 3o0f_A Putative metal-dependen 80.6 7.9 0.00027 34.5 9.1 63 135-208 185-255 (301)
136 3eoo_A Methylisocitrate lyase; 79.6 33 0.0011 30.4 15.6 155 152-309 26-191 (298)
137 3gk0_A PNP synthase, pyridoxin 79.6 2.1 7.3E-05 37.2 4.7 116 100-222 104-229 (278)
138 1fob_A Beta-1,4-galactanase; B 79.5 8 0.00027 34.9 9.0 53 158-215 30-82 (334)
139 3l5l_A Xenobiotic reductase A; 79.2 5.3 0.00018 36.6 7.7 77 99-175 244-325 (363)
140 3paj_A Nicotinate-nucleotide p 79.1 9.5 0.00033 34.2 9.1 63 105-176 242-304 (320)
141 3vk5_A MOEO5; TIM barrel, tran 79.1 5.9 0.0002 34.9 7.5 78 102-186 187-271 (286)
142 2ftp_A Hydroxymethylglutaryl-C 78.2 36 0.0012 30.1 13.9 123 98-234 156-285 (302)
143 1xi3_A Thiamine phosphate pyro 78.0 27 0.00094 28.6 13.8 163 102-313 27-194 (215)
144 1thf_D HISF protein; thermophI 77.7 9.1 0.00031 32.7 8.5 93 105-211 155-250 (253)
145 3qja_A IGPS, indole-3-glycerol 77.6 5.1 0.00017 35.2 6.8 63 112-175 180-242 (272)
146 4fo4_A Inosine 5'-monophosphat 77.4 43 0.0015 30.6 16.1 154 131-312 80-243 (366)
147 3nav_A Tryptophan synthase alp 77.2 36 0.0012 29.6 15.8 184 99-311 32-239 (271)
148 3oa3_A Aldolase; structural ge 77.1 38 0.0013 29.8 20.3 180 97-306 70-260 (288)
149 1jvn_A Glutamine, bifunctional 77.1 37 0.0013 32.9 13.4 219 101-334 280-550 (555)
150 1yya_A Triosephosphate isomera 77.1 35 0.0012 29.4 12.1 201 99-331 15-250 (250)
151 3jr2_A Hexulose-6-phosphate sy 77.0 31 0.0011 28.7 12.7 177 98-312 16-197 (218)
152 3kts_A Glycerol uptake operon 76.3 31 0.0011 28.4 15.3 158 98-310 17-180 (192)
153 3tsm_A IGPS, indole-3-glycerol 75.7 9.2 0.00031 33.5 7.9 45 130-175 205-249 (272)
154 3igs_A N-acetylmannosamine-6-p 75.7 36 0.0012 28.8 18.4 171 97-312 32-213 (232)
155 3lye_A Oxaloacetate acetyl hyd 75.6 44 0.0015 29.7 14.3 155 152-309 29-198 (307)
156 1f76_A Dihydroorotate dehydrog 75.4 21 0.00072 32.0 10.6 78 98-175 222-318 (336)
157 3l0g_A Nicotinate-nucleotide p 75.3 8 0.00027 34.3 7.4 65 105-178 218-282 (300)
158 1h5y_A HISF; histidine biosynt 75.1 16 0.00054 30.8 9.3 91 107-210 160-252 (253)
159 1lwj_A 4-alpha-glucanotransfer 74.8 4.1 0.00014 38.3 5.8 63 160-222 28-100 (441)
160 2eja_A URO-D, UPD, uroporphyri 74.2 48 0.0016 29.6 12.9 69 106-176 184-260 (338)
161 3ffs_A Inosine-5-monophosphate 74.1 22 0.00077 32.9 10.5 125 104-244 146-275 (400)
162 3a24_A Alpha-galactosidase; gl 73.9 19 0.00065 35.6 10.3 106 98-212 306-424 (641)
163 1qap_A Quinolinic acid phospho 73.8 9 0.00031 34.0 7.4 60 107-175 221-280 (296)
164 1yad_A Regulatory protein TENI 73.8 37 0.0013 28.1 16.8 183 100-332 29-217 (221)
165 3ndo_A Deoxyribose-phosphate a 73.8 41 0.0014 28.6 16.4 176 97-306 25-216 (231)
166 4ef8_A Dihydroorotate dehydrog 73.6 53 0.0018 29.8 13.7 195 131-333 110-334 (354)
167 1vhn_A Putative flavin oxidore 73.6 4.1 0.00014 36.6 5.2 81 104-186 143-226 (318)
168 3gnn_A Nicotinate-nucleotide p 73.5 10 0.00035 33.6 7.6 64 106-178 221-284 (298)
169 3ble_A Citramalate synthase fr 73.4 49 0.0017 29.7 12.5 30 131-160 167-199 (337)
170 1oy0_A Ketopantoate hydroxymet 73.1 48 0.0016 29.1 12.1 88 110-212 50-155 (281)
171 3tqv_A Nicotinate-nucleotide p 73.0 10 0.00035 33.5 7.5 63 105-176 209-271 (287)
172 1wa3_A 2-keto-3-deoxy-6-phosph 72.8 37 0.0013 27.7 20.2 163 97-314 18-183 (205)
173 3elf_A Fructose-bisphosphate a 72.5 28 0.00095 31.6 10.4 122 106-228 116-266 (349)
174 3l21_A DHDPS, dihydrodipicolin 72.2 30 0.001 30.7 10.6 112 97-217 32-152 (304)
175 3o6c_A PNP synthase, pyridoxin 72.2 4.7 0.00016 34.8 4.9 117 100-222 75-221 (260)
176 1yxy_A Putative N-acetylmannos 72.1 42 0.0015 28.0 16.5 170 98-312 31-218 (234)
177 2dh2_A 4F2 cell-surface antige 72.0 5.5 0.00019 37.3 5.9 81 161-243 42-141 (424)
178 1wbh_A KHG/KDPG aldolase; lyas 72.0 42 0.0014 28.0 13.5 161 97-312 24-187 (214)
179 2ffi_A 2-pyrone-4,6-dicarboxyl 71.9 37 0.0013 29.1 11.2 220 98-345 40-273 (288)
180 3p6l_A Sugar phosphate isomera 71.9 25 0.00085 29.8 9.8 13 321-333 217-229 (262)
181 3usb_A Inosine-5'-monophosphat 71.8 31 0.0011 33.1 11.3 128 102-245 256-389 (511)
182 3tn4_A Phosphotriesterase; lac 71.7 24 0.00083 32.1 10.0 95 132-241 192-295 (360)
183 4aie_A Glucan 1,6-alpha-glucos 71.3 5.2 0.00018 38.5 5.7 65 160-224 37-112 (549)
184 2z1k_A (NEO)pullulanase; hydro 71.2 4.5 0.00015 38.3 5.2 37 190-226 94-131 (475)
185 1vr6_A Phospho-2-dehydro-3-deo 71.2 49 0.0017 30.0 11.8 184 99-312 118-313 (350)
186 4aef_A Neopullulanase (alpha-a 71.2 4.2 0.00014 40.4 5.1 70 159-228 243-322 (645)
187 1ht6_A AMY1, alpha-amylase iso 71.1 5.1 0.00018 37.2 5.4 59 161-219 27-96 (405)
188 3q58_A N-acetylmannosamine-6-p 70.9 47 0.0016 28.0 18.5 171 97-312 32-213 (229)
189 1gvf_A Tagatose-bisphosphate a 70.9 55 0.0019 28.8 12.1 123 107-243 90-231 (286)
190 1hjs_A Beta-1,4-galactanase; 4 70.9 5.3 0.00018 36.1 5.3 53 158-215 30-82 (332)
191 3qm3_A Fructose-bisphosphate a 70.8 55 0.0019 29.8 12.0 119 109-228 130-277 (357)
192 3b0p_A TRNA-dihydrouridine syn 70.6 19 0.00066 32.6 9.1 87 99-186 142-238 (350)
193 3rys_A Adenosine deaminase 1; 70.6 28 0.00094 31.5 10.1 79 97-178 145-227 (343)
194 1qpo_A Quinolinate acid phosph 70.5 13 0.00044 32.8 7.6 64 105-176 205-270 (284)
195 3q58_A N-acetylmannosamine-6-p 70.5 8.6 0.00029 32.7 6.3 64 108-175 143-210 (229)
196 4avf_A Inosine-5'-monophosphat 70.5 24 0.00081 33.7 10.1 127 102-244 229-361 (490)
197 3igs_A N-acetylmannosamine-6-p 70.3 9.1 0.00031 32.6 6.4 65 107-175 142-210 (232)
198 3na8_A Putative dihydrodipicol 70.2 59 0.002 28.9 13.4 127 97-234 41-178 (315)
199 2jgq_A Triosephosphate isomera 70.1 50 0.0017 28.1 14.5 140 153-310 69-218 (233)
200 2wc7_A Alpha amylase, catalyti 70.0 3.8 0.00013 39.1 4.4 36 191-226 101-137 (488)
201 3iwp_A Copper homeostasis prot 70.0 26 0.00087 30.9 9.3 73 99-174 109-185 (287)
202 1n7k_A Deoxyribose-phosphate a 69.9 21 0.00071 30.5 8.5 74 98-173 145-219 (234)
203 3cpr_A Dihydrodipicolinate syn 69.9 44 0.0015 29.5 11.1 111 98-217 34-153 (304)
204 1ea9_C Cyclomaltodextrinase; h 69.8 6.4 0.00022 38.5 6.0 64 159-222 176-249 (583)
205 1y0e_A Putative N-acetylmannos 69.8 27 0.00091 29.0 9.3 67 109-175 134-204 (223)
206 4avf_A Inosine-5'-monophosphat 69.7 22 0.00074 34.0 9.6 69 107-175 284-361 (490)
207 2f6u_A GGGPS, (S)-3-O-geranylg 69.7 27 0.00094 29.7 9.3 69 99-175 147-218 (234)
208 1vhc_A Putative KHG/KDPG aldol 69.3 50 0.0017 27.7 18.2 160 98-312 26-188 (224)
209 3r12_A Deoxyribose-phosphate a 69.3 56 0.0019 28.3 18.8 176 98-306 56-242 (260)
210 1gcy_A Glucan 1,4-alpha-maltot 69.2 9.9 0.00034 36.6 7.2 37 183-219 80-120 (527)
211 4fxs_A Inosine-5'-monophosphat 69.1 30 0.001 33.0 10.5 126 103-244 232-363 (496)
212 2jbm_A Nicotinate-nucleotide p 69.0 8.7 0.0003 34.2 6.2 59 109-175 212-272 (299)
213 1viz_A PCRB protein homolog; s 69.0 30 0.001 29.5 9.4 68 100-175 141-210 (240)
214 2b7n_A Probable nicotinate-nuc 68.9 11 0.00037 33.1 6.7 59 109-175 197-257 (273)
215 2wkj_A N-acetylneuraminate lya 68.8 39 0.0013 29.9 10.5 111 98-217 29-149 (303)
216 1j0h_A Neopullulanase; beta-al 68.7 6.5 0.00022 38.5 5.8 69 159-227 180-258 (588)
217 3flu_A DHDPS, dihydrodipicolin 68.6 33 0.0011 30.2 10.1 112 97-217 24-144 (297)
218 1wzl_A Alpha-amylase II; pullu 68.0 6.4 0.00022 38.5 5.6 69 159-227 177-255 (585)
219 4fxs_A Inosine-5'-monophosphat 67.9 24 0.00082 33.7 9.5 69 107-175 286-363 (496)
220 1y0e_A Putative N-acetylmannos 67.6 51 0.0018 27.2 17.0 175 98-312 20-207 (223)
221 2tps_A Protein (thiamin phosph 67.3 52 0.0018 27.2 16.3 166 103-313 33-204 (227)
222 3pao_A Adenosine deaminase; st 66.8 27 0.00091 31.4 9.1 77 99-178 144-224 (326)
223 1xky_A Dihydrodipicolinate syn 66.5 40 0.0014 29.8 10.1 111 98-217 30-149 (301)
224 1gte_A Dihydropyrimidine dehyd 66.5 1.3E+02 0.0044 31.4 15.5 194 131-333 617-844 (1025)
225 3vav_A 3-methyl-2-oxobutanoate 66.4 18 0.00061 31.7 7.5 110 97-208 71-188 (275)
226 2yxg_A DHDPS, dihydrodipicolin 66.4 42 0.0014 29.4 10.2 112 97-217 17-137 (289)
227 1tv5_A Dhodehase, dihydroorota 66.2 32 0.0011 32.4 9.7 78 98-175 308-402 (443)
228 3zwt_A Dihydroorotate dehydrog 66.1 48 0.0016 30.3 10.7 78 98-175 231-327 (367)
229 1wpc_A Glucan 1,4-alpha-maltoh 65.9 9.1 0.00031 36.3 6.1 34 186-219 75-110 (485)
230 3tak_A DHDPS, dihydrodipicolin 65.9 35 0.0012 29.9 9.6 112 97-217 18-138 (291)
231 3zwt_A Dihydroorotate dehydrog 65.9 79 0.0027 28.8 14.6 182 146-334 146-356 (367)
232 3daq_A DHDPS, dihydrodipicolin 65.8 33 0.0011 30.2 9.4 112 97-217 19-139 (292)
233 3b4u_A Dihydrodipicolinate syn 65.7 38 0.0013 29.8 9.8 113 97-217 20-144 (294)
234 2e6f_A Dihydroorotate dehydrog 65.5 71 0.0024 28.0 14.9 194 132-333 78-301 (314)
235 3w01_A Heptaprenylglyceryl pho 65.5 52 0.0018 28.0 10.1 69 99-175 143-214 (235)
236 3tva_A Xylose isomerase domain 65.3 65 0.0022 27.5 11.4 114 108-231 28-174 (290)
237 1vzw_A Phosphoribosyl isomeras 65.3 8 0.00027 32.9 5.1 66 106-175 151-222 (244)
238 3bh4_A Alpha-amylase; calcium, 65.3 9.4 0.00032 36.2 6.1 34 186-219 71-106 (483)
239 2ehh_A DHDPS, dihydrodipicolin 65.3 44 0.0015 29.4 10.1 111 98-217 18-137 (294)
240 1g94_A Alpha-amylase; beta-alp 65.2 10 0.00035 35.6 6.2 60 161-220 21-93 (448)
241 3oix_A Putative dihydroorotate 65.1 79 0.0027 28.5 14.4 195 131-334 111-333 (345)
242 3dx5_A Uncharacterized protein 65.1 22 0.00075 30.6 8.1 126 98-231 15-162 (286)
243 3eeg_A 2-isopropylmalate synth 65.1 37 0.0013 30.4 9.7 33 129-161 147-182 (325)
244 1ud2_A Amylase, alpha-amylase; 65.0 8.6 0.0003 36.4 5.8 34 186-219 73-108 (480)
245 1f6k_A N-acetylneuraminate lya 64.8 46 0.0016 29.2 10.2 112 97-217 20-141 (293)
246 3gr7_A NADPH dehydrogenase; fl 64.7 60 0.0021 29.2 11.1 160 161-334 150-328 (340)
247 4aee_A Alpha amylase, catalyti 64.6 4.6 0.00016 40.5 3.9 69 159-227 269-347 (696)
248 2cw6_A Hydroxymethylglutaryl-C 64.5 39 0.0013 29.7 9.7 75 99-177 154-234 (298)
249 3s5o_A 4-hydroxy-2-oxoglutarat 64.4 41 0.0014 29.8 9.8 114 97-217 31-153 (307)
250 1zja_A Trehalulose synthase; s 64.3 9.4 0.00032 37.0 6.0 63 159-221 36-109 (557)
251 3kru_A NADH:flavin oxidoreduct 64.3 27 0.00091 31.6 8.6 88 99-187 228-321 (343)
252 2r8w_A AGR_C_1641P; APC7498, d 64.2 43 0.0015 30.1 9.9 112 97-217 51-171 (332)
253 1s2w_A Phosphoenolpyruvate pho 64.1 17 0.00056 32.3 7.0 71 100-176 169-239 (295)
254 3si9_A DHDPS, dihydrodipicolin 64.1 78 0.0027 28.1 13.8 112 97-217 39-159 (315)
255 1vs1_A 3-deoxy-7-phosphoheptul 63.9 74 0.0025 27.7 18.3 202 99-329 50-269 (276)
256 1m53_A Isomaltulose synthase; 63.9 8.1 0.00028 37.7 5.4 64 159-222 49-123 (570)
257 2y88_A Phosphoribosyl isomeras 63.7 8.6 0.00029 32.6 5.0 69 103-175 151-225 (244)
258 1qwg_A PSL synthase;, (2R)-pho 63.6 53 0.0018 28.2 9.7 128 98-235 52-198 (251)
259 3edf_A FSPCMD, cyclomaltodextr 63.6 7.9 0.00027 38.0 5.3 62 159-220 152-227 (601)
260 3qze_A DHDPS, dihydrodipicolin 63.5 35 0.0012 30.4 9.2 112 97-217 40-160 (314)
261 1qo2_A Molecule: N-((5-phospho 63.2 27 0.00093 29.4 8.1 71 99-175 145-223 (241)
262 3ewb_X 2-isopropylmalate synth 63.2 46 0.0016 29.2 9.8 65 98-165 114-185 (293)
263 4dpp_A DHDPS 2, dihydrodipicol 63.0 57 0.0019 29.7 10.5 105 98-212 77-189 (360)
264 3a5f_A Dihydrodipicolinate syn 62.9 42 0.0015 29.4 9.5 110 98-216 19-137 (291)
265 3cyv_A URO-D, UPD, uroporphyri 62.8 68 0.0023 28.7 11.2 69 106-175 192-270 (354)
266 1mxg_A Alpha amylase; hyperthe 62.8 14 0.00049 34.5 6.7 34 186-219 79-114 (435)
267 3m5v_A DHDPS, dihydrodipicolin 62.7 44 0.0015 29.5 9.7 111 98-217 25-145 (301)
268 3gka_A N-ethylmaleimide reduct 62.7 19 0.00065 32.9 7.3 28 27-58 149-176 (361)
269 3fkr_A L-2-keto-3-deoxyarabona 62.5 36 0.0012 30.2 9.1 111 97-213 25-144 (309)
270 3qfe_A Putative dihydrodipicol 62.2 38 0.0013 30.2 9.2 112 97-215 28-148 (318)
271 2gou_A Oxidoreductase, FMN-bin 62.2 30 0.001 31.5 8.7 71 100-175 249-322 (365)
272 3nl6_A Thiamine biosynthetic b 62.0 1.2E+02 0.004 29.3 14.6 135 102-273 26-167 (540)
273 3bc9_A AMYB, alpha amylase, ca 61.5 9.8 0.00034 37.4 5.5 34 186-219 201-236 (599)
274 2guy_A Alpha-amylase A; (beta- 61.4 5.6 0.00019 37.7 3.7 33 185-217 89-122 (478)
275 4ab4_A Xenobiotic reductase B; 61.3 21 0.00073 32.6 7.4 28 27-58 141-168 (362)
276 3dhu_A Alpha-amylase; structur 61.2 7.2 0.00025 36.6 4.4 60 160-219 35-111 (449)
277 1o4u_A Type II quinolic acid p 61.1 9.7 0.00033 33.6 4.8 64 105-176 204-269 (285)
278 4do7_A Amidohydrolase 2; enzym 60.9 65 0.0022 28.1 10.5 220 97-345 33-282 (303)
279 2zic_A Dextran glucosidase; TI 60.9 8.8 0.0003 37.1 5.0 64 159-222 35-109 (543)
280 2qv5_A AGR_C_5032P, uncharacte 60.9 82 0.0028 27.2 10.8 132 97-249 106-250 (261)
281 2v9d_A YAGE; dihydrodipicolini 60.8 45 0.0015 30.1 9.5 110 97-215 48-166 (343)
282 1o5k_A DHDPS, dihydrodipicolin 60.6 46 0.0016 29.5 9.4 111 98-217 30-149 (306)
283 3dz1_A Dihydrodipicolinate syn 60.6 58 0.002 28.9 10.1 124 97-232 25-159 (313)
284 3eb2_A Putative dihydrodipicol 60.5 64 0.0022 28.4 10.3 127 97-234 21-157 (300)
285 2inf_A URO-D, UPD, uroporphyri 60.5 95 0.0033 27.9 13.3 68 106-175 198-272 (359)
286 1ep3_A Dihydroorotate dehydrog 60.5 86 0.0029 27.3 15.8 191 131-333 80-297 (311)
287 4a29_A Engineered retro-aldol 60.2 37 0.0013 29.3 8.2 45 130-175 189-233 (258)
288 2ze0_A Alpha-glucosidase; TIM 60.1 11 0.00038 36.5 5.6 64 159-222 35-109 (555)
289 1jub_A Dihydroorotate dehydrog 60.0 47 0.0016 29.2 9.4 78 98-175 169-271 (311)
290 2p0o_A Hypothetical protein DU 60.0 30 0.001 31.7 8.0 89 110-211 88-176 (372)
291 3lye_A Oxaloacetate acetyl hyd 59.7 30 0.001 30.8 7.9 38 100-143 177-214 (307)
292 2d73_A Alpha-glucosidase SUSB; 59.6 77 0.0026 31.7 11.4 111 98-213 368-508 (738)
293 3e96_A Dihydrodipicolinate syn 59.5 94 0.0032 27.5 12.7 106 98-212 30-143 (316)
294 1hvx_A Alpha-amylase; hydrolas 59.1 14 0.00049 35.3 6.1 34 186-219 74-109 (515)
295 1vrd_A Inosine-5'-monophosphat 59.1 1E+02 0.0036 29.0 12.2 128 101-244 236-369 (494)
296 1vyr_A Pentaerythritol tetrani 59.0 37 0.0013 30.9 8.6 71 100-175 250-323 (364)
297 3khj_A Inosine-5-monophosphate 59.0 55 0.0019 29.7 9.8 69 107-175 159-236 (361)
298 1jvn_A Glutamine, bifunctional 59.0 24 0.00083 34.2 7.8 94 103-210 454-551 (555)
299 3iar_A Adenosine deaminase; pu 58.9 24 0.00081 32.3 7.3 35 29-64 53-94 (367)
300 3s5o_A 4-hydroxy-2-oxoglutarat 58.9 56 0.0019 28.9 9.7 96 129-234 31-140 (307)
301 3lmz_A Putative sugar isomeras 58.9 80 0.0027 26.5 11.1 114 98-229 30-152 (257)
302 3aj7_A Oligo-1,6-glucosidase; 58.5 14 0.00046 36.2 5.9 63 159-221 44-117 (589)
303 1uok_A Oligo-1,6-glucosidase; 58.2 8.9 0.0003 37.2 4.5 63 160-222 36-109 (558)
304 1ydo_A HMG-COA lyase; TIM-barr 58.1 35 0.0012 30.3 8.1 35 130-164 154-191 (307)
305 3nav_A Tryptophan synthase alp 57.9 48 0.0017 28.8 8.8 106 134-243 6-131 (271)
306 2r91_A 2-keto-3-deoxy-(6-phosp 57.7 65 0.0022 28.1 9.8 110 98-217 16-133 (286)
307 1x1o_A Nicotinate-nucleotide p 57.6 45 0.0015 29.3 8.6 60 108-176 210-269 (286)
308 1q6o_A Humps, 3-keto-L-gulonat 57.6 79 0.0027 26.0 11.0 175 99-313 14-195 (216)
309 3usb_A Inosine-5'-monophosphat 57.6 44 0.0015 32.0 9.3 69 107-175 311-388 (511)
310 1tre_A Triosephosphate isomera 57.5 93 0.0032 26.8 10.9 153 153-329 75-248 (255)
311 1qo2_A Molecule: N-((5-phospho 57.5 4.7 0.00016 34.4 2.2 71 102-176 31-103 (241)
312 1ps9_A 2,4-dienoyl-COA reducta 57.3 27 0.00091 34.6 7.9 87 98-184 225-321 (671)
313 3zss_A Putative glucanohydrola 57.3 12 0.00041 37.5 5.4 59 159-217 257-345 (695)
314 3r2g_A Inosine 5'-monophosphat 57.2 30 0.001 31.6 7.6 73 100-178 98-172 (361)
315 2rfg_A Dihydrodipicolinate syn 57.2 41 0.0014 29.6 8.4 111 98-217 18-137 (297)
316 2aaa_A Alpha-amylase; glycosid 57.2 6.6 0.00023 37.3 3.4 35 185-219 89-125 (484)
317 1w3i_A EDA, 2-keto-3-deoxy glu 57.0 1E+02 0.0034 27.0 12.5 95 129-234 16-121 (293)
318 3e74_A Allantoinase; (beta/alp 57.0 51 0.0018 30.9 9.6 113 100-212 90-206 (473)
319 1vp8_A Hypothetical protein AF 56.8 38 0.0013 27.9 7.2 103 99-210 27-143 (201)
320 1eep_A Inosine 5'-monophosphat 56.8 61 0.0021 29.8 9.9 71 105-175 206-285 (404)
321 2r91_A 2-keto-3-deoxy-(6-phosp 56.6 1E+02 0.0034 26.8 12.6 95 129-234 15-120 (286)
322 1ua7_A Alpha-amylase; beta-alp 56.2 8.4 0.00029 35.9 3.8 30 191-220 73-103 (422)
323 2ojp_A DHDPS, dihydrodipicolin 56.1 51 0.0017 28.9 8.8 112 97-217 18-138 (292)
324 4exq_A UPD, URO-D, uroporphyri 56.1 79 0.0027 28.7 10.4 66 110-176 206-281 (368)
325 1aw2_A Triosephosphate isomera 56.1 98 0.0034 26.6 11.4 139 153-310 77-236 (256)
326 3c2e_A Nicotinate-nucleotide p 55.9 6.1 0.00021 35.1 2.7 57 112-176 217-278 (294)
327 3ffs_A Inosine-5-monophosphate 55.9 41 0.0014 31.1 8.4 70 106-175 197-275 (400)
328 3k8k_A Alpha-amylase, SUSG; al 55.8 12 0.00042 37.2 5.2 67 161-227 66-142 (669)
329 2nuw_A 2-keto-3-deoxygluconate 55.8 1E+02 0.0035 26.8 12.4 44 191-234 76-121 (288)
330 3a5v_A Alpha-galactosidase; be 55.7 28 0.00097 32.1 7.3 79 98-176 23-130 (397)
331 1qho_A Alpha-amylase; glycosid 55.7 9.9 0.00034 38.0 4.5 34 184-217 98-132 (686)
332 1j93_A UROD, uroporphyrinogen 55.7 1.1E+02 0.0039 27.2 12.3 71 106-177 198-276 (353)
333 3d0c_A Dihydrodipicolinate syn 55.6 40 0.0014 29.9 8.1 105 98-211 30-142 (314)
334 3klk_A Glucansucrase; native f 55.6 14 0.00048 38.7 5.6 62 159-220 690-774 (1039)
335 4hty_A Cellulase; (alpha/beta) 55.5 75 0.0026 28.5 10.2 126 154-282 84-226 (359)
336 2btm_A TIM, protein (triosepho 55.5 72 0.0024 27.4 9.3 198 99-328 14-247 (252)
337 1xg4_A Probable methylisocitra 55.5 1.1E+02 0.0037 26.9 13.0 155 152-310 21-188 (295)
338 2yxb_A Coenzyme B12-dependent 55.4 61 0.0021 25.6 8.4 68 98-173 56-126 (161)
339 2hjp_A Phosphonopyruvate hydro 55.3 1.1E+02 0.0037 26.9 14.7 171 152-331 19-203 (290)
340 2nuw_A 2-keto-3-deoxygluconate 55.2 68 0.0023 28.0 9.5 105 97-211 16-128 (288)
341 2vxn_A Triosephosphate isomera 55.1 1E+02 0.0034 26.5 11.5 134 161-310 81-236 (251)
342 2isw_A Putative fructose-1,6-b 55.1 82 0.0028 28.1 9.9 77 107-184 91-182 (323)
343 4h3d_A 3-dehydroquinate dehydr 55.0 1E+02 0.0035 26.5 14.4 160 98-285 29-209 (258)
344 2h6r_A Triosephosphate isomera 54.9 91 0.0031 25.9 11.5 138 161-330 75-215 (219)
345 1m3u_A 3-methyl-2-oxobutanoate 54.8 30 0.001 30.1 6.8 109 98-208 60-176 (264)
346 1vc4_A Indole-3-glycerol phosp 54.7 35 0.0012 29.3 7.4 64 111-175 171-236 (254)
347 2ze3_A DFA0005; organic waste 54.7 1.1E+02 0.0037 26.7 11.3 115 150-275 18-138 (275)
348 3aie_A Glucosyltransferase-SI; 54.7 15 0.00051 37.7 5.6 62 159-220 637-721 (844)
349 2e6f_A Dihydroorotate dehydrog 54.6 49 0.0017 29.1 8.6 78 98-175 171-273 (314)
350 2qr6_A IMP dehydrogenase/GMP r 54.3 1.3E+02 0.0044 27.4 13.9 162 131-312 140-309 (393)
351 1g5a_A Amylosucrase; glycosylt 54.3 12 0.00041 37.0 4.7 62 159-220 117-191 (628)
352 1yxy_A Putative N-acetylmannos 54.2 14 0.00046 31.2 4.6 65 107-175 146-215 (234)
353 3apt_A Methylenetetrahydrofola 54.1 1.2E+02 0.004 26.9 12.7 98 98-208 83-201 (310)
354 2r14_A Morphinone reductase; H 54.1 31 0.0011 31.6 7.3 28 27-58 154-181 (377)
355 3eoo_A Methylisocitrate lyase; 54.1 30 0.001 30.6 6.9 16 161-176 225-240 (298)
356 1vrd_A Inosine-5'-monophosphat 54.1 55 0.0019 31.0 9.3 68 108-175 293-369 (494)
357 3i65_A Dihydroorotate dehydrog 54.0 57 0.0019 30.3 9.0 78 98-175 280-374 (415)
358 1o66_A 3-methyl-2-oxobutanoate 53.6 36 0.0012 29.7 7.2 110 98-208 60-176 (275)
359 1w3i_A EDA, 2-keto-3-deoxy glu 53.5 86 0.0029 27.4 9.9 108 97-214 16-131 (293)
360 3aty_A Tcoye, prostaglandin F2 53.4 44 0.0015 30.6 8.2 28 27-58 161-190 (379)
361 1ur4_A Galactanase; hydrolase, 53.3 16 0.00056 33.8 5.2 60 157-216 50-112 (399)
362 3fa4_A 2,3-dimethylmalate lyas 53.2 27 0.00092 31.0 6.4 33 135-167 169-204 (302)
363 2bhu_A Maltooligosyltrehalose 53.1 11 0.00037 37.1 4.2 59 159-217 148-217 (602)
364 1ep3_A Dihydroorotate dehydrog 53.1 41 0.0014 29.5 7.8 73 103-175 178-270 (311)
365 4g1k_A Triosephosphate isomera 53.1 1.1E+02 0.0039 26.5 10.7 139 153-310 100-256 (272)
366 1vcf_A Isopentenyl-diphosphate 53.0 1.2E+02 0.0042 26.8 11.4 134 158-309 135-285 (332)
367 1zlp_A PSR132, petal death pro 52.9 1.2E+02 0.0043 26.9 13.1 154 152-309 43-209 (318)
368 2nx9_A Oxaloacetate decarboxyl 52.9 60 0.002 30.7 9.1 74 99-176 156-234 (464)
369 1eep_A Inosine 5'-monophosphat 52.8 1.4E+02 0.0047 27.3 12.0 70 103-178 154-225 (404)
370 3s83_A Ggdef family protein; s 52.6 1E+02 0.0036 25.9 12.0 97 131-241 137-234 (259)
371 4d9a_A 2-pyrone-4,6-dicarbaxyl 52.4 40 0.0014 29.7 7.5 220 97-344 53-285 (303)
372 3i65_A Dihydroorotate dehydrog 52.1 1.5E+02 0.0051 27.5 16.3 194 132-333 159-402 (415)
373 3p6l_A Sugar phosphate isomera 52.1 1E+02 0.0036 25.7 12.3 115 98-229 22-153 (262)
374 1d3c_A Cyclodextrin glycosyltr 52.0 8.3 0.00028 38.5 3.2 34 184-217 106-140 (686)
375 3ttq_A Dextransucrase; (beta/a 51.8 17 0.00059 38.0 5.5 62 159-220 857-941 (1108)
376 4fo4_A Inosine 5'-monophosphat 51.6 78 0.0027 28.8 9.4 69 107-175 163-240 (366)
377 3hbl_A Pyruvate carboxylase; T 51.4 96 0.0033 33.0 11.3 77 98-177 689-769 (1150)
378 3cwo_X Beta/alpha-barrel prote 51.3 57 0.0019 26.6 8.1 100 104-215 133-233 (237)
379 2vc6_A MOSA, dihydrodipicolina 51.3 50 0.0017 29.0 7.9 111 98-217 18-137 (292)
380 2nly_A BH1492 protein, diverge 51.2 1.2E+02 0.0039 26.0 11.5 135 97-250 79-228 (245)
381 2a4a_A Deoxyribose-phosphate a 51.0 45 0.0016 29.2 7.4 23 147-169 226-248 (281)
382 3bo9_A Putative nitroalkan dio 50.9 45 0.0015 29.8 7.7 65 107-175 137-205 (326)
383 3hm7_A Allantoinase; metallo-d 50.9 40 0.0014 31.2 7.7 108 102-212 78-188 (448)
384 1nvm_A HOA, 4-hydroxy-2-oxoval 50.9 52 0.0018 29.6 8.2 116 101-229 120-247 (345)
385 3tha_A Tryptophan synthase alp 50.8 1E+02 0.0035 26.4 9.6 41 134-175 186-227 (252)
386 1cyg_A Cyclodextrin glucanotra 50.7 8.2 0.00028 38.5 2.9 35 183-217 101-136 (680)
387 3ahy_A Beta-glucosidase; cellu 50.6 34 0.0012 32.5 7.0 57 157-214 64-125 (473)
388 2o9p_A Beta-glucosidase B; fam 50.5 27 0.00093 32.9 6.3 55 158-214 70-127 (454)
389 3czg_A Sucrose hydrolase; (alp 50.5 13 0.00045 36.8 4.3 62 159-220 110-184 (644)
390 2hsa_B 12-oxophytodienoate red 50.4 74 0.0025 29.4 9.2 75 100-175 259-348 (402)
391 3ahx_A Beta-glucosidase A; cel 50.3 35 0.0012 32.2 7.1 55 158-213 62-119 (453)
392 3noy_A 4-hydroxy-3-methylbut-2 50.3 1.5E+02 0.005 26.9 15.7 120 97-235 42-176 (366)
393 3qfe_A Putative dihydrodipicol 50.3 90 0.0031 27.7 9.6 95 129-234 28-137 (318)
394 1lt8_A Betaine-homocysteine me 50.3 66 0.0023 29.8 8.8 70 159-245 143-217 (406)
395 3bw2_A 2-nitropropane dioxygen 50.2 73 0.0025 28.8 9.2 69 107-175 158-237 (369)
396 2ekc_A AQ_1548, tryptophan syn 50.2 1.1E+02 0.0037 26.2 9.8 41 134-175 193-234 (262)
397 2z6i_A Trans-2-enoyl-ACP reduc 50.2 46 0.0016 29.7 7.7 65 107-175 123-191 (332)
398 1rqb_A Transcarboxylase 5S sub 50.0 90 0.0031 30.1 10.0 43 99-144 173-215 (539)
399 1jcn_A Inosine monophosphate d 49.7 55 0.0019 31.2 8.5 71 101-177 254-326 (514)
400 1ug6_A Beta-glycosidase; gluco 49.6 38 0.0013 31.7 7.2 56 158-214 60-118 (431)
401 3nco_A Endoglucanase fncel5A; 49.2 42 0.0014 29.5 7.2 54 155-213 41-102 (320)
402 3iv3_A Tagatose 1,6-diphosphat 49.2 1.5E+02 0.005 26.6 15.2 140 160-310 115-281 (332)
403 1r3s_A URO-D, uroporphyrinogen 48.8 1.5E+02 0.0052 26.6 13.0 67 107-175 203-283 (367)
404 2z6i_A Trans-2-enoyl-ACP reduc 48.8 1.4E+02 0.0049 26.4 18.2 162 131-330 47-213 (332)
405 3ceu_A Thiamine phosphate pyro 48.7 1.1E+02 0.0038 25.0 9.6 156 105-312 17-175 (210)
406 1vhn_A Putative flavin oxidore 48.6 88 0.003 27.6 9.2 126 99-244 69-213 (318)
407 3iwp_A Copper homeostasis prot 48.5 71 0.0024 28.0 8.2 69 105-176 170-239 (287)
408 1jae_A Alpha-amylase; glycosid 48.4 6.5 0.00022 37.3 1.7 36 185-220 66-103 (471)
409 1m6j_A TIM, TPI, triosephospha 48.4 1.3E+02 0.0045 25.9 11.5 134 161-310 87-242 (261)
410 2qs8_A XAA-Pro dipeptidase; am 48.4 1.5E+02 0.0053 26.6 11.5 80 98-179 173-260 (418)
411 2p10_A MLL9387 protein; putati 48.3 1.1E+02 0.0036 26.9 9.2 127 98-230 108-249 (286)
412 1ur4_A Galactanase; hydrolase, 48.2 1.7E+02 0.0057 26.9 12.4 44 108-152 55-108 (399)
413 3jr2_A Hexulose-6-phosphate sy 48.1 1.1E+02 0.0039 25.1 11.0 62 107-174 76-138 (218)
414 1v08_A Beta-glucosidase; glyco 48.0 40 0.0014 32.3 7.2 56 158-214 81-141 (512)
415 3ngj_A Deoxyribose-phosphate a 47.9 1.3E+02 0.0044 25.6 17.7 175 98-306 40-226 (239)
416 1r2r_A TIM, triosephosphate is 47.9 1.3E+02 0.0045 25.7 10.0 139 153-310 75-233 (248)
417 1yad_A Regulatory protein TENI 47.7 53 0.0018 27.1 7.3 67 108-175 124-192 (221)
418 3cqj_A L-ribulose-5-phosphate 47.7 1.3E+02 0.0045 25.6 10.7 14 320-333 243-256 (295)
419 3noy_A 4-hydroxy-3-methylbut-2 47.6 1.2E+02 0.004 27.6 9.6 51 110-164 101-153 (366)
420 1mo0_A TIM, triosephosphate is 47.4 1.3E+02 0.0043 26.2 9.6 200 98-330 35-267 (275)
421 1e4i_A Beta-glucosidase; hydro 47.4 42 0.0014 31.5 7.1 56 158-214 61-119 (447)
422 2ze3_A DFA0005; organic waste 47.4 55 0.0019 28.6 7.4 65 100-176 167-233 (275)
423 2e3z_A Beta-glucosidase; TIM b 47.3 40 0.0014 31.9 7.0 56 157-213 64-124 (465)
424 3h5d_A DHDPS, dihydrodipicolin 47.3 83 0.0028 27.8 8.8 111 98-217 25-145 (311)
425 4hjf_A Ggdef family protein; s 47.2 98 0.0033 27.7 9.4 92 159-271 216-327 (340)
426 1wza_A Alpha-amylase A; hydrol 47.1 12 0.00041 35.5 3.4 37 185-221 73-111 (488)
427 1o5x_A TIM, triosephosphate is 47.0 1.3E+02 0.0043 25.8 9.5 184 99-310 16-233 (248)
428 2dga_A Beta-glucosidase; alpha 46.8 41 0.0014 32.7 7.0 55 158-213 131-188 (565)
429 1cbg_A Cyanogenic beta-glucosi 46.4 41 0.0014 32.1 6.9 55 158-213 76-135 (490)
430 1vkf_A Glycerol uptake operon 46.4 1.2E+02 0.0041 24.8 11.9 98 115-244 32-135 (188)
431 1v02_A Dhurrinase, dhurrinase- 46.3 44 0.0015 32.5 7.2 55 158-213 133-192 (565)
432 3m07_A Putative alpha amylase; 46.3 20 0.00067 35.4 4.8 60 159-218 158-229 (618)
433 4g9p_A 4-hydroxy-3-methylbut-2 46.3 1.8E+02 0.0062 26.8 14.3 140 98-242 35-229 (406)
434 3ih1_A Methylisocitrate lyase; 46.2 1.6E+02 0.0053 26.1 13.4 135 107-243 42-194 (305)
435 3s1x_A Probable transaldolase; 46.1 1.3E+02 0.0045 25.2 11.9 96 194-309 92-188 (223)
436 1p1x_A Deoxyribose-phosphate a 45.8 50 0.0017 28.6 6.8 14 25-38 21-34 (260)
437 4gqr_A Pancreatic alpha-amylas 45.8 12 0.00042 35.1 3.2 28 190-217 74-101 (496)
438 1uas_A Alpha-galactosidase; TI 45.7 56 0.0019 29.6 7.6 81 98-178 23-133 (362)
439 1ceo_A Cellulase CELC; glycosy 45.6 75 0.0026 28.0 8.4 59 156-215 29-91 (343)
440 3l5l_A Xenobiotic reductase A; 45.4 1.7E+02 0.0059 26.3 12.4 160 161-333 164-345 (363)
441 3n9k_A Glucan 1,3-beta-glucosi 45.3 20 0.00069 33.2 4.5 57 155-213 73-133 (399)
442 2nzl_A Hydroxyacid oxidase 1; 45.3 98 0.0033 28.4 9.2 69 106-175 265-336 (392)
443 2rdx_A Mandelate racemase/muco 45.2 1.7E+02 0.0059 26.3 12.5 126 99-235 171-314 (379)
444 3ivs_A Homocitrate synthase, m 45.2 86 0.0029 29.2 8.8 109 98-219 144-261 (423)
445 3bmv_A Cyclomaltodextrin gluca 45.2 12 0.00042 37.3 3.2 34 184-217 107-141 (683)
446 2jf7_A Strictosidine-O-beta-D- 45.0 47 0.0016 32.0 7.2 55 158-213 100-159 (532)
447 1wcg_A Thioglucosidase, myrosi 45.0 48 0.0016 31.4 7.1 55 158-213 62-120 (464)
448 3s6d_A Putative triosephosphat 44.9 90 0.0031 27.7 8.3 158 153-330 128-305 (310)
449 3b8i_A PA4872 oxaloacetate dec 44.8 1.6E+02 0.0055 25.7 10.7 168 137-309 11-188 (287)
450 2v9d_A YAGE; dihydrodipicolini 44.7 1.7E+02 0.0059 26.1 10.8 95 129-234 48-155 (343)
451 2p9b_A Possible prolidase; pro 44.7 1.5E+02 0.005 27.2 10.6 81 98-180 182-272 (458)
452 3tdn_A FLR symmetric alpha-bet 44.7 4.6 0.00016 34.6 0.0 72 102-175 157-229 (247)
453 3vni_A Xylose isomerase domain 44.6 1.4E+02 0.005 25.2 11.5 75 158-242 20-106 (294)
454 2hk0_A D-psicose 3-epimerase; 44.5 84 0.0029 27.2 8.4 127 99-231 38-193 (309)
455 3rr1_A GALD, putative D-galact 44.4 1.2E+02 0.0041 27.9 9.7 76 98-173 124-210 (405)
456 3fj0_A Beta-glucosidase; BGLB, 44.2 48 0.0016 31.3 7.0 56 158-214 82-140 (465)
457 1qox_A Beta-glucosidase; hydro 44.1 50 0.0017 31.1 7.1 57 157-214 60-119 (449)
458 3qtp_A Enolase 1; glycolysis, 44.0 2E+02 0.007 26.8 11.5 112 97-228 278-393 (441)
459 4af0_A Inosine-5'-monophosphat 43.9 2.3E+02 0.0078 27.3 12.3 130 157-312 282-416 (556)
460 1ji1_A Alpha-amylase I; beta/a 43.9 20 0.00068 35.4 4.5 62 159-220 195-271 (637)
461 3rmj_A 2-isopropylmalate synth 43.7 99 0.0034 28.1 8.9 63 98-163 121-190 (370)
462 2e9l_A Cytosolic beta-glucosid 43.7 51 0.0017 31.2 7.1 56 157-213 59-118 (469)
463 3sfw_A Dihydropyrimidinase; hy 43.6 1.2E+02 0.004 28.1 9.7 112 101-212 131-262 (461)
464 3b4u_A Dihydrodipicolinate syn 43.5 1.6E+02 0.0056 25.5 12.2 97 129-234 20-128 (294)
465 1gvf_A Tagatose-bisphosphate a 43.4 1.1E+02 0.0038 26.8 8.8 188 98-306 26-229 (286)
466 1kbi_A Cytochrome B2, L-LCR; f 43.4 1.4E+02 0.0048 28.5 10.2 69 107-175 357-432 (511)
467 1rvg_A Fructose-1,6-bisphospha 43.3 1.7E+02 0.006 25.8 10.9 76 108-184 89-182 (305)
468 3dz1_A Dihydrodipicolinate syn 43.2 80 0.0027 27.9 8.0 95 129-234 25-130 (313)
469 2c6q_A GMP reductase 2; TIM ba 43.2 1.3E+02 0.0045 27.0 9.6 70 106-175 174-252 (351)
470 3vni_A Xylose isomerase domain 42.9 1.5E+02 0.0053 25.1 14.8 124 98-231 17-174 (294)
471 3l21_A DHDPS, dihydrodipicolin 42.5 1.7E+02 0.006 25.6 11.1 95 129-234 32-139 (304)
472 1ub3_A Aldolase protein; schif 42.5 1.5E+02 0.0051 24.7 18.4 177 98-306 16-202 (220)
473 3pnz_A Phosphotriesterase fami 42.3 1.5E+02 0.005 26.5 9.7 135 98-244 126-270 (330)
474 3p3b_A Mandelate racemase/muco 42.2 1.1E+02 0.0037 27.9 9.0 100 130-235 212-330 (392)
475 1wv2_A Thiazole moeity, thiazo 42.2 1.7E+02 0.0058 25.3 10.6 78 94-175 115-216 (265)
476 1hjs_A Beta-1,4-galactanase; 4 42.1 1.8E+02 0.0063 25.7 14.5 136 109-245 35-213 (332)
477 2x7v_A Probable endonuclease 4 42.1 87 0.003 26.5 8.0 44 191-235 87-133 (287)
478 2qgy_A Enolase from the enviro 42.0 2E+02 0.0068 26.1 11.4 83 130-214 205-304 (391)
479 3dc8_A Dihydropyrimidinase; TI 41.9 1E+02 0.0035 29.0 9.1 113 101-213 128-260 (490)
480 4f3h_A Fimxeal, putative uncha 41.8 1.5E+02 0.0052 24.7 9.8 97 132-242 142-239 (250)
481 2ojp_A DHDPS, dihydrodipicolin 41.8 1.7E+02 0.006 25.3 10.7 95 129-234 18-125 (292)
482 4hb7_A Dihydropteroate synthas 41.7 1.7E+02 0.0059 25.3 9.7 78 219-306 27-105 (270)
483 2wsk_A Glycogen debranching en 41.7 18 0.00062 35.9 3.8 60 160-219 184-269 (657)
484 2j78_A Beta-glucosidase A; fam 41.6 60 0.002 30.7 7.2 54 158-213 84-141 (468)
485 1bf2_A Isoamylase; hydrolase, 41.4 27 0.00094 35.2 5.1 61 159-219 209-300 (750)
486 3lgd_A Adenosine deaminase CEC 41.3 42 0.0014 32.2 6.1 78 98-178 270-362 (508)
487 1oy0_A Ketopantoate hydroxymet 41.3 90 0.0031 27.3 7.8 111 97-208 76-194 (281)
488 1szn_A Alpha-galactosidase; (b 41.2 96 0.0033 28.7 8.5 80 98-177 26-134 (417)
489 3o63_A Probable thiamine-phosp 41.2 46 0.0016 28.4 5.9 73 98-175 143-219 (243)
490 2q02_A Putative cytoplasmic pr 41.2 46 0.0016 28.1 6.0 79 158-245 22-106 (272)
491 3sgz_A Hydroxyacid oxidase 2; 41.1 1.4E+02 0.0049 26.9 9.4 69 106-175 230-301 (352)
492 1to3_A Putative aldolase YIHT; 41.1 1.9E+02 0.0063 25.5 15.3 138 159-315 112-260 (304)
493 1e4m_M Myrosinase MA1; hydrola 41.0 53 0.0018 31.4 6.8 55 158-213 80-139 (501)
494 3qn3_A Enolase; structural gen 40.8 1.4E+02 0.0049 27.6 9.6 112 98-229 261-377 (417)
495 1p0k_A Isopentenyl-diphosphate 40.7 2E+02 0.0067 25.6 15.4 191 104-309 76-280 (349)
496 1b22_A DNA repair protein RAD5 40.7 29 0.00098 26.0 3.9 53 155-207 32-86 (114)
497 1zfj_A Inosine monophosphate d 40.7 2.3E+02 0.0079 26.5 12.6 103 103-212 234-342 (491)
498 2qiw_A PEP phosphonomutase; st 40.7 65 0.0022 27.7 6.8 67 100-176 167-237 (255)
499 3gip_A N-acyl-D-glutamate deac 40.5 2.3E+02 0.0078 26.3 12.6 98 107-212 173-280 (480)
500 3aof_A Endoglucanase; glycosyl 40.5 58 0.002 28.4 6.7 121 155-284 33-169 (317)
No 1
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=100.00 E-value=1.5e-50 Score=383.51 Aligned_cols=315 Identities=56% Similarity=0.983 Sum_probs=287.4
Q ss_pred cCCCCCHHHHHHhhcCChHHHHHHHHHHHHhhcCCCceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHH
Q psy8190 25 QSLIWKLDEVINLFNLPFNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVI 104 (348)
Q Consensus 25 ~~~~ls~~e~~~Ll~~~~~~l~~~A~~~~~~~~~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~ 104 (348)
...++|.+|+..|++.|+.+|+..|+++++++|.|+.|.++.++++.|++|+++|.||+++..+.....+++.+++++|+
T Consensus 26 ~~~~ls~~e~~~l~~~~~~~L~~~A~~~~~~~~~~~~v~~~~~i~i~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~eei~ 105 (369)
T 1r30_A 26 HRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVL 105 (369)
T ss_dssp -CCCCCSTTTHHHHHSCHHHHHHHHHHHHHHHSCTTCCEEEEEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHH
T ss_pred ccCCCCHHHHHHHHhccHHHHHHHHHHHHHHhcCCCEEEEEEEEEEECCCCcccCccCCCCCcCCCCCcccccCCHHHHH
Confidence 46789999999999999999999999999998866899999899966999999999999987543333456568999999
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHh
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYG 184 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~ 184 (348)
++++.+.+.|++.|+|+||++.|...+.+++.++++.+++.++++++++|.++++.++.|+++|++++++++||++++|+
T Consensus 106 ~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~l~~e~l~~L~~aGvd~v~i~les~~e~~~ 185 (369)
T 1r30_A 106 ESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYG 185 (369)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSSCCHHHHHHHHHHCCCEEECCCBSCHHHHH
T ss_pred HHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHCCCCEEeecCcCCHHHHH
Confidence 99999888999999998875345556789999999999998889999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHH
Q psy8190 185 DIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLE 264 (348)
Q Consensus 185 ~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~ 264 (348)
.+++++++++++++++.++++|+.+++++|+|++||.+++.++++++++++..+++++++.|+|.|||||++.++++.++
T Consensus 186 ~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~gT~l~~~~~~~~~~ 265 (369)
T 1r30_A 186 NIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFD 265 (369)
T ss_dssp HHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHH
T ss_pred HhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeeeeecCCCcCCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999744789999999999999999888999999
Q ss_pred HHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCchHHHHHHHHcCCCchhhhh
Q psy8190 265 FIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLGINTRNIKI 339 (348)
Q Consensus 265 ~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i~~~G~~p~~~~~ 339 (348)
.+++++++|.++|+..++++++|+++++..++.++++|||+++.|+++.+.+|++.+++.++++++|+.|++|.-
T Consensus 266 ~~~~~~~~r~~l~~~~i~i~~~~~~l~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~~g~~~~~~~~ 340 (369)
T 1r30_A 266 FIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAV 340 (369)
T ss_dssp HHHHHHHHHHHCTTSEEEEESSGGGSCHHHHHHHHHHTCCEEECSSBSSSSBCCCHHHHHHHHHHTTCCSCCCC-
T ss_pred HHHHHHHHHHhCCCCceEeecchhhcChHHHHHHhhCCCceEEeCCeeeCCCCCCHHHHHHHHHHcCCCeecccc
Confidence 999999999999998888888899988888999999999999999988899999999999999999999998874
No 2
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=100.00 E-value=8.4e-51 Score=382.70 Aligned_cols=309 Identities=18% Similarity=0.310 Sum_probs=271.4
Q ss_pred hhcccCCCCCHHHHHHhhcCC----hHHHHHHHHHHHHhhcCCCceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCcccc
Q psy8190 21 ISSSQSLIWKLDEVINLFNLP----FNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATK 96 (348)
Q Consensus 21 ~~~~~~~~ls~~e~~~Ll~~~----~~~l~~~A~~~~~~~~~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~ 96 (348)
+++..+++||++|++.|++.+ +.+|+..|+.+|++++ |+.|+++++|++ |++|+++|.||+++... ...+|.
T Consensus 15 ~k~~~~~~l~~~e~~~l~~~~~~~~~~~L~~~A~~~r~~~~-g~~v~~~~~i~~-t~~C~~~C~fC~~~~~~--~~~~~~ 90 (350)
T 3t7v_A 15 DKVIEGYQLTDNDLRTLLSLESKEGLERLYSAARKVRDHYF-GNRVFLNCFIYF-STYCKNQCSFCYYNCRN--EINRYR 90 (350)
T ss_dssp HHHHTTCCCCHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHH-TTEEEEEEEEEE-ECCCCCCCTTCTTCTTS--CCCCCB
T ss_pred HHHHcCCCCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHC-CCEEEEEEeeec-CCCcCCCCCcCCCcCcC--CCCcee
Confidence 445689999999999999863 4789999999988888 899999999999 99999999999998854 445675
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcc-cHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDR-DLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~-~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
+++++|+++++.+.+.|++.|+|+|| ++|... +.+++.++++.+++ .++.+++++|.++++.++.|+++|++++.+
T Consensus 91 -ls~eei~~~~~~~~~~G~~~i~l~gG-e~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~~~~e~l~~L~~aG~~~i~i 168 (350)
T 3t7v_A 91 -LTMEEIKETCKTLKGAGFHMVDLTMG-EDPYYYEDPNRFVELVQIVKEELGLPIMISPGLMDNATLLKAREKGANFLAL 168 (350)
T ss_dssp -CCHHHHHHHHHHHTTSCCSEEEEEEC-CCHHHHHSTHHHHHHHHHHHHHHCSCEEEECSSCCHHHHHHHHHTTEEEEEC
T ss_pred -CCHHHHHHHHHHHHHCCCCEEEEeeC-CCCccccCHHHHHHHHHHHHhhcCceEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 89999999999998999999999887 344322 46889999999986 478889999999999999999999999999
Q ss_pred cCCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCC
Q psy8190 175 NLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP 253 (348)
Q Consensus 175 g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~ 253 (348)
++|| ++++++.+++++++++++++++.++++|+.+++++|+|+|||.+++.++++++++++ ++++++++|+|.||||
T Consensus 169 ~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~~l~~l~--~~~v~~~~f~p~~gT~ 246 (350)
T 3t7v_A 169 YQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTND--PDMVRVMTFLPQEGTP 246 (350)
T ss_dssp CCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHHHHHHTC--CSEEEEEECCCCTTST
T ss_pred eeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHHHHHhCC--CCEEEecceeeCCCCc
Confidence 9999 799999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeee---CCe----eccCC------CCCc
Q psy8190 254 LYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFY---GDK----LLTTD------NTKT 320 (348)
Q Consensus 254 l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~---~~~----~~~~~------g~~~ 320 (348)
+++.++++.++++++++++|+++|+.+|+++| ...+.+..+.+|.+|||+++. .+. +...+ ..+.
T Consensus 247 l~~~~~~~~~e~l~~ia~~Rl~lp~~~I~a~~--~~~g~~~~~~~l~~Gan~~~~~~~~~~~~ag~~~~~~~~~~~~~~~ 324 (350)
T 3t7v_A 247 LEGFRDKSNLSELKIISVLRLMFPKRLIPASL--DLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDI 324 (350)
T ss_dssp TTTCCCCCCCCHHHHHHHHHHHSTTSBCEEEH--HHHHHHHHHHHHHTTCCEEEEECCSSCCCCCSSCTTTTCSSCCCCH
T ss_pred CccCCCCChHHHHHHHHHHHHhCCCcCccccc--cccChhHHHHHHhcCCceecCCCCCCCCCCCCCCCcccchhccCCH
Confidence 99988899999999999999999999898875 555567788999999999842 221 11111 2345
Q ss_pred hHHHHHHHHcCCCchhhhh
Q psy8190 321 NDDSKLLKKLGINTRNIKI 339 (348)
Q Consensus 321 ~~~~~~i~~~G~~p~~~~~ 339 (348)
+++.++|+++||+|++|+-
T Consensus 325 ~~~~~~i~~~G~~~~~r~~ 343 (350)
T 3t7v_A 325 KSVVRRLEIMGMKPARQAD 343 (350)
T ss_dssp HHHHHHHHHHTCEECCHHH
T ss_pred HHHHHHHHHcCCccccHHH
Confidence 8999999999999999974
No 3
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=100.00 E-value=5.6e-46 Score=349.51 Aligned_cols=309 Identities=20% Similarity=0.324 Sum_probs=272.5
Q ss_pred hhcccCCCCCHHHHHHhhcCC----hHHHHHHHHHHHHhhcCCCceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCcccc
Q psy8190 21 ISSSQSLIWKLDEVINLFNLP----FNDLLFRAQKVHRKYFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATK 96 (348)
Q Consensus 21 ~~~~~~~~ls~~e~~~Ll~~~----~~~l~~~A~~~~~~~~~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~ 96 (348)
+++.. +.||++|++.|++.+ ..+|+..|+.+++++| |+.++++++|++ |++|+++|.||+++... ....+|.
T Consensus 8 ~k~~~-~~l~~~e~~~ll~~~~~~~~~~l~~~A~~ir~~~~-g~~v~~~~~i~~-t~~C~~~C~fC~~~~~~-~~~~~~~ 83 (348)
T 3iix_A 8 EKLER-REFTREVLKEALSINDRGFNEALFKLADEIRRKYV-GDEVHIRAIIEF-SNVCRKNCLYCGLRRDN-KNLKRYR 83 (348)
T ss_dssp HHHHT-TCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-CSEEEEEEEEEE-ECCCSCCCTTCTTCTTC-CSSCCCB
T ss_pred HHHHh-CCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHc-CCEEEEEEEeEe-cCCcCCcCccCCCCCCC-CCcCcee
Confidence 34455 899999999999863 4678999999988888 899999999999 99999999999988753 3335665
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
+++++++++++.+.+.|++.|+|+|| ++| ....+++.++++.+++.++.+++++|.++++.++.|+++|++++.+++
T Consensus 84 -ls~eei~~~i~~~~~~g~~~i~~~gG-e~p-~~~~~~~~~li~~i~~~~~~i~~s~g~l~~e~l~~L~~ag~~~v~i~l 160 (348)
T 3iix_A 84 -MTPEEIVERARLAVQFGAKTIVLQSG-EDP-YXMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLLRH 160 (348)
T ss_dssp -CCHHHHHHHHHHHHHTTCSEEEEEES-CCG-GGTTHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHHHHTCCEEECCC
T ss_pred -CCHHHHHHHHHHHHHCCCCEEEEEeC-CCC-CccHHHHHHHHHHHHhcCceEEEecCCCCHHHHHHHHHhCCCEEeeee
Confidence 89999999999999999999999988 433 445689999999999888999999999999999999999999999999
Q ss_pred CC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCC
Q psy8190 177 DT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPL 254 (348)
Q Consensus 177 et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l 254 (348)
|| ++++++.+++++++++++++++.++++|+.+++++|+|+ +||.+++.+++.++++++ ++.+++++|+|.||||+
T Consensus 161 et~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~--~~~i~i~~~~p~~gt~l 238 (348)
T 3iix_A 161 ETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHD--FDMVGIGPFIPHPDTPL 238 (348)
T ss_dssp BCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHHT--CSEECCEECCCCTTSTT
T ss_pred eeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhcC--CCEEeeeeeecCCCCCc
Confidence 99 799999999999999999999999999999999999999 999999999999999999 89999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeC--------------CeeccCCCCC-
Q psy8190 255 YGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYG--------------DKLLTTDNTK- 319 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~--------------~~~~~~~g~~- 319 (348)
++.++++.++.+++++++|+++|+.+|+++++|..+++..+..++.+|||+++.. ++..+.++..
T Consensus 239 ~~~~~~~~~e~~~~~a~~R~~lp~~~i~~~~~~~~~~~~~~~~~l~~Gan~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (348)
T 3iix_A 239 ANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTA 318 (348)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHSTTSBCBCCHHHHHHSTTHHHHHHTTTCCEECCBCCCTTTGGGCCSSSCCTTTTSCTTC
T ss_pred ccCCCCCHHHHHHHHHHHHHHCCCCCchhcchhhhcCHHHHHHHHhcCCcEEeCCCCchhcccccccCCCCcccCCCchh
Confidence 9999999999999999999999999999877788888889999999999999721 1122222222
Q ss_pred -chHHHHHHHHcCCCchhhh
Q psy8190 320 -TNDDSKLLKKLGINTRNIK 338 (348)
Q Consensus 320 -~~~~~~~i~~~G~~p~~~~ 338 (348)
.++..++|+++||+|+..+
T Consensus 319 ~~~~~~~~~~~~g~~~~~~~ 338 (348)
T 3iix_A 319 CIPCVMKMIELLGRKPGRDW 338 (348)
T ss_dssp HHHHHHHHHHHTTCEECSSC
T ss_pred hHHHHHHHHHHcCCEeCCCC
Confidence 3678999999999998763
No 4
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.94 E-value=3e-27 Score=229.33 Aligned_cols=239 Identities=13% Similarity=0.142 Sum_probs=185.3
Q ss_pred EEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhC----CCCEEEEeccCCCCCcccHHHHHHHHHHH
Q psy8190 67 LLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD----GATRFCMGAAWRELKDRDLDNIENMICEV 142 (348)
Q Consensus 67 ~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~----G~~~i~l~gg~~~~~~~~~~~~~~l~~~i 142 (348)
.|.+ ++|+.+|.||+++...... .......++.+.++++...+. ++..|+|+|| +|+..+.+.+.++++.+
T Consensus 56 YihI--pfC~~~C~yC~~~~~~~~~-~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGG--tpt~l~~~~l~~ll~~i 130 (457)
T 1olt_A 56 YVHI--PFCHKLCYFCGCNKIVTRQ-QHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGG--TPTYLNKAQISRLMKLL 130 (457)
T ss_dssp EEEE--CEESSCCTTCCSSCEECSC-THHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEES--CGGGSCHHHHHHHHHHH
T ss_pred EEEc--CCCCCCCCCCCCceeccCC-cchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCC--CcccCCHHHHHHHHHHH
Confidence 3555 6799999999998742111 112223467888887766543 4677899887 35555778999999999
Q ss_pred Hhc-------CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCe-eeEeE
Q psy8190 143 KKI-------GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGIN-ICCGG 213 (348)
Q Consensus 143 ~~~-------~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~-i~~~~ 213 (348)
++. .+.+.++++.++++.++.|+++|+++|++|+|| ++++++.++|+|++++++++++.++++|+. +++++
T Consensus 131 ~~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dl 210 (457)
T 1olt_A 131 RENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDL 210 (457)
T ss_dssp HHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred HHhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 872 344556788999999999999999999999999 799999999999999999999999999997 99999
Q ss_pred eeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCC-----CCCCCHHHHHHHHHHHHHHCCCCc---eecc
Q psy8190 214 IIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG-----SSILDPLEFIRTIAVARITMPTSR---IRMS 284 (348)
Q Consensus 214 i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~-----~~~~~~~~~~~~~a~~R~~lp~~~---i~~s 284 (348)
|+|+ |||.+++.++++.+.+++ +++++++.|.|.|||+... ...++.++..+++..+...+.... +.++
T Consensus 211 I~GlPget~e~~~~tl~~~~~l~--~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~yeis 288 (457)
T 1olt_A 211 IYGLPKQTPESFAFTLKRVAELN--PDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMD 288 (457)
T ss_dssp EESCTTCCHHHHHHHHHHHHHHC--CSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEEETT
T ss_pred EcCCCCCCHHHHHHHHHHHHhcC--cCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEec
Confidence 9999 999999999999999999 9999999999999998653 235788888999888876665432 2221
Q ss_pred ----ccc-------------cccc----hhhHHHHHHhCcceeeeCCee
Q psy8190 285 ----AGR-------------KEMG----ETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 285 ----~g~-------------~~l~----~~~~~~~l~~GAn~~~~~~~~ 312 (348)
++. ++++ ....+.++++||.+.+.+.++
T Consensus 289 ~fa~~~~~~~~~~~~~~~~r~~~~Y~~~~~~~~lG~G~gA~s~~~~~~~ 337 (457)
T 1olt_A 289 HFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337 (457)
T ss_dssp EEECTTSHHHHHHHHTCCEECSSCEESCCSCEEEEESTTCEEEETTEEE
T ss_pred hhcCCCchhhhHHhhcchhhcccccccCCCCeEEEEccceeecCCCCEE
Confidence 111 1111 123467899999998765443
No 5
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.94 E-value=3.7e-26 Score=210.39 Aligned_cols=198 Identities=16% Similarity=0.234 Sum_probs=144.2
Q ss_pred EEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcc---cHHHHHHHHHHH
Q psy8190 66 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDR---DLDNIENMICEV 142 (348)
Q Consensus 66 ~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~---~~~~~~~l~~~i 142 (348)
+.+.+ ++||+++|.||.++... + +++.+++++|+++++.+.+.|+++|.|+|+....... ..+.+.++++.+
T Consensus 6 ~~v~i-s~GC~~~C~fC~~~~~~--g--~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l 80 (304)
T 2qgq_A 6 AYVKI-SDGCDRGCTFCSIPSFK--G--SLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRL 80 (304)
T ss_dssp EEEES-BCCC---------------C--CCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHH
T ss_pred EEEEE-CCCCCCcCccCCccccC--C--CceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHH
Confidence 45677 99999999999988643 1 2345899999999999988999999998752211111 124688888888
Q ss_pred Hhc-CcE-EE---EecCCCCHHHHHHHHHhC--CCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHHHHH--cCCeeeEe
Q psy8190 143 KKI-GLE-TC---LTLGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRN--VGINICCG 212 (348)
Q Consensus 143 ~~~-~~~-i~---~~~g~l~~e~l~~Lk~aG--~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~--~G~~i~~~ 212 (348)
++. ++. +. +++..++++.++.|+++| ++++.+++|| ++++++.++++++.++++++++.+++ .|+.++++
T Consensus 81 ~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~ 160 (304)
T 2qgq_A 81 NSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTS 160 (304)
T ss_dssp HTSSSSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HhcCCCcEEEEeeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEE
Confidence 875 553 32 457789999999999999 9999999999 89999999999999999999999999 78999999
Q ss_pred Eeeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCC-CCCHHHHHHHHH
Q psy8190 213 GIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSS-ILDPLEFIRTIA 270 (348)
Q Consensus 213 ~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~-~~~~~~~~~~~a 270 (348)
+|+|+ |||.+++.++++++.+++ ++.+.+++|.|.||||++..+ .++.+...+.+.
T Consensus 161 ~IvG~PgEt~ed~~~t~~~l~~l~--~~~v~~~~~~p~pgT~~~~~~~~v~~~~~~~r~~ 218 (304)
T 2qgq_A 161 IIVGFPGETEEDFEELKQFVEEIQ--FDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQE 218 (304)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHC--CSEEEEEECCC-----------CCCHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcC--CCEEEEEEeeCCCCChhHhCcCCCCHHHHHHHHH
Confidence 99999 999999999999999999 899999999999999998865 566655444433
No 6
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=99.81 E-value=3e-18 Score=159.99 Aligned_cols=206 Identities=17% Similarity=0.293 Sum_probs=158.6
Q ss_pred hcCCCceEEEEEEEeecCCCCCCCCcCCCCCCCC---CCCccccccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccH
Q psy8190 56 YFDANEIELAVLLSIKTGGCTEDCGYCPQSTHYN---TEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDL 132 (348)
Q Consensus 56 ~~~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~---~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~ 132 (348)
.| |..+... .+++ |++|+.+|.||.....+. ........++.+++.+.++.+.+.|+..|.|+|| + |...
T Consensus 8 ~~-gr~~~~l-~i~~-T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tGG-E-Pll~-- 80 (340)
T 1tv8_A 8 KL-GRPIRDL-RLSV-TDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGG-E-PLMR-- 80 (340)
T ss_dssp TT-SCBCCEE-EEEC-CSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEESS-C-GGGS--
T ss_pred CC-CCccCeE-EEEe-CCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeCC-C-ccch--
Confidence 45 6666433 4677 999999999998765211 0112234589999999999988899999999987 4 3221
Q ss_pred HHHHHHHHHHHhcCc--EEEE-ecCCCCHHHHHHHHHhCCCeeeccCCC-CHHHHhccCCCC-CHHHHHHHHHHHHHcCC
Q psy8190 133 DNIENMICEVKKIGL--ETCL-TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTR-DYENRLNTLKNVRNVGI 207 (348)
Q Consensus 133 ~~~~~l~~~i~~~~~--~i~~-~~g~l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~~~-~~~~~~~~i~~~~~~G~ 207 (348)
..+.++++.+++.+. .+.+ +.|.+..+.++.|+++|+++|.+++++ +++.++.+++.. +++++++.++.++++|+
T Consensus 81 ~~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~ 160 (340)
T 1tv8_A 81 RDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL 160 (340)
T ss_dssp TTHHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC
Confidence 246788888887633 4443 356665679999999999999999999 799999998877 99999999999999999
Q ss_pred eeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCC-CCCCCHHHHHHHHHH
Q psy8190 208 NICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG-SSILDPLEFIRTIAV 271 (348)
Q Consensus 208 ~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~-~~~~~~~~~~~~~a~ 271 (348)
.+.+.+++.-|++.+++.+.++++.+++ ++ +.+..++|.++++.+. ....+.++.++.+..
T Consensus 161 ~v~i~~vv~~g~n~~ei~~~~~~~~~~g--~~-~~~i~~~p~~~~~~~~~~~~~~~~e~~~~l~~ 222 (340)
T 1tv8_A 161 NVKVNVVIQKGINDDQIIPMLEYFKDKH--IE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQ 222 (340)
T ss_dssp EEEEEEEECTTTTGGGHHHHHHHHHHTT--CC-EEEEECCCBCSSSSBCCSSCCCHHHHHHHHHH
T ss_pred CEEEEEEEeCCCCHHHHHHHHHHHHhcC--Ce-EEEEEeeEcCCCccchhhcCCCHHHHHHHHHh
Confidence 8888877744889999999999999998 65 6777889998887543 345677777776653
No 7
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.79 E-value=7.5e-18 Score=149.39 Aligned_cols=194 Identities=15% Similarity=0.223 Sum_probs=149.5
Q ss_pred cCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhC---CCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcE
Q psy8190 72 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSD---GATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE 148 (348)
Q Consensus 72 t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~---G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~ 148 (348)
|++|+.+|.||..+..+... ..+.++++++++.++...+. ++..|.|+|| + | ....+.+.++++.+++.++.
T Consensus 26 t~~Cn~~C~~C~~~~~~~~~--~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~GG-E-P-~l~~~~l~~l~~~~~~~~~~ 100 (245)
T 3c8f_A 26 FQGCLMRCLYCHNRDTWDTH--GGKEVTVEDLMKEVVTYRHFMNASGGGVTASGG-E-A-ILQAEFVRDWFRACKKEGIH 100 (245)
T ss_dssp ESCCSCCCTTCSCGGGCCTT--CSEEECHHHHHHHHGGGHHHHTSTTCEEEEEES-C-G-GGGHHHHHHHHHHHHTTTCC
T ss_pred eCCCCCCCCCCCCchhcccc--cCccCCHHHHHHHHHHhhhhhcCCCCeEEEECC-C-c-CCCHHHHHHHHHHHHHcCCc
Confidence 78999999999976533221 22347899999998876553 4788999987 4 3 23456688999999987776
Q ss_pred EEEe-cCCC--CHHHHHHHHHhCCCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeE--eeecCCCHH
Q psy8190 149 TCLT-LGML--NENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGG--IIGLSESRD 222 (348)
Q Consensus 149 i~~~-~g~l--~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~--i~Glget~e 222 (348)
+.+. .|.+ +.+.++.|.++ ++.+.+++++ +++.++.+++. ++++++++++.++++|+.+...+ +.|..++.+
T Consensus 101 i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~~~~~~~~~~~~-~~~~~~~~i~~l~~~g~~v~i~~~~~~g~~~~~~ 178 (245)
T 3c8f_A 101 TCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLVGV-SNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDD 178 (245)
T ss_dssp EEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHHSS-CSHHHHHHHHHHHHHTCCEEEEEEECTTTTCCHH
T ss_pred EEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCCCHHHhhhccCC-CHHHHHHHHHHHHhcCCEEEEEEeecCCCCCCHH
Confidence 6553 4666 78899999998 8999999999 79999998764 46999999999999999766554 334457889
Q ss_pred HHHHHHHHHHhcCCCC-CeeecccccccCCC---------CCCCCCCCCHHHHHHHHHHHHH
Q psy8190 223 QRAELIFQLANLNPYP-ESVPINNLVQIKGT---------PLYGSSILDPLEFIRTIAVARI 274 (348)
Q Consensus 223 ~~~~~l~~l~~l~~~~-~~i~~~~l~P~~gT---------~l~~~~~~~~~~~~~~~a~~R~ 274 (348)
++.+.++++.+++ + ..+.+.++.|.+++ ++.+.++++.+++.+++..++.
T Consensus 179 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (245)
T 3c8f_A 179 SAHRLGEFTRDMG--NVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQ 238 (245)
T ss_dssp HHHHHHHHHHHHC--CEEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcC--CCceeEEEeccccChhHHHhhCcccccccCCCCCHHHHHHHHHHHHh
Confidence 9999999999998 5 77888888886654 3344567888888888777764
No 8
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.78 E-value=6.4e-18 Score=157.89 Aligned_cols=203 Identities=12% Similarity=0.094 Sum_probs=154.1
Q ss_pred CCCCCCCCcCCCCCCCCC-CCccccccCHHHHHHHHHHHHh--------------------CCCCEEEEeccCCCCCccc
Q psy8190 73 GGCTEDCGYCPQSTHYNT-EITATKILSIESVITAAQKAKS--------------------DGATRFCMGAAWRELKDRD 131 (348)
Q Consensus 73 ~~C~~~C~fC~~~~~~~~-~~~~~~~~~~eei~~~~~~~~~--------------------~G~~~i~l~gg~~~~~~~~ 131 (348)
++|+.+|.||..+..... .....+.++++++++++..... ..++.|.|+|||+ |...
T Consensus 79 ~gCnl~C~fC~~~~~~~~~~~~~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~sggGE-Pll~- 156 (342)
T 2yx0_A 79 AWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLSGE-PMLY- 156 (342)
T ss_dssp SCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSSSC-GGGS-
T ss_pred hhhhCcCcccCCCCCCCcccccccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEEcCCCc-ccch-
Confidence 699999999997643211 0012334789999987765432 1256788974445 3222
Q ss_pred HHHHHHHHHHHHhcCcEEEEe-cCCCCHHHHHHHHHhC--CCeeeccCCC-CHHHHhccCC---CCCHHHHHHHHHHHHH
Q psy8190 132 LDNIENMICEVKKIGLETCLT-LGMLNENQAYRLKKVG--LDYYNHNLDT-SPKLYGDIIS---TRDYENRLNTLKNVRN 204 (348)
Q Consensus 132 ~~~~~~l~~~i~~~~~~i~~~-~g~l~~e~l~~Lk~aG--~~~i~~g~et-~~e~l~~i~~---~~~~~~~~~~i~~~~~ 204 (348)
..+.++++.+++.++.+.+. .|.+ ++.++.|+++| ++.+.+++++ +++.++.+++ ..++++++++++.+++
T Consensus 157 -~~l~~ll~~~~~~g~~i~l~TNG~~-~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~~~i~~l~~ 234 (342)
T 2yx0_A 157 -PYMGDLVEEFHKRGFTTFIVTNGTI-PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRD 234 (342)
T ss_dssp -TTHHHHHHHHHHTTCEEEEEECSCC-HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHHHHHHTT
T ss_pred -hhHHHHHHHHHHCCCcEEEEcCCCc-HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHHHHHHHHHh
Confidence 26888999998888887764 4555 88899999998 9999999999 7999999886 4579999999999999
Q ss_pred cCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCC--CCCCCCCCCCHHHHHHHHHHHHHHCCCCce
Q psy8190 205 VGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKG--TPLYGSSILDPLEFIRTIAVARITMPTSRI 281 (348)
Q Consensus 205 ~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~g--T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i 281 (348)
.|+.+...+++..|++.+++.+.++++.+++ ++.+.+.+|.|.++ +++....+++.+++.+++..++..+|+..|
T Consensus 235 ~g~~v~i~~~l~~g~n~~~~~~l~~~l~~~~--~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l~~~~I 311 (342)
T 2yx0_A 235 LPTRTVVRLTLVKGENMHSPEKYAKLILKAR--PMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLPGYHI 311 (342)
T ss_dssp CSSEEEEEEEECTTTTCCCHHHHHHHHHHHC--CSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTCTTEEE
T ss_pred CCCCEEEEEEEECCccHHHHHHHHHHHHHcC--CCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhccCCce
Confidence 9999888877755888777888899999998 89988878877654 445445578899999999999988887555
No 9
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=4.5e-16 Score=143.41 Aligned_cols=204 Identities=13% Similarity=0.131 Sum_probs=127.9
Q ss_pred CCceEEEEEEEeec-CCCCCCCCcCCCCCCCCCC-----CccccccCHHHHHHHHHHHHh--------------------
Q psy8190 59 ANEIELAVLLSIKT-GGCTEDCGYCPQSTHYNTE-----ITATKILSIESVITAAQKAKS-------------------- 112 (348)
Q Consensus 59 g~~v~~~~~i~i~t-~~C~~~C~fC~~~~~~~~~-----~~~~~~~~~eei~~~~~~~~~-------------------- 112 (348)
|.....+..+.+ | .+|+.+|.||..+.....+ ....+.++++++++++.....
T Consensus 46 ~~~~~~~l~i~~-t~~~Cn~~C~fC~~~~~~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~ 124 (311)
T 2z2u_A 46 GIETHRCIQCTP-SVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKE 124 (311)
T ss_dssp CCCGGGEEEEES-CSSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHH
T ss_pred eecCCCeEEecc-ChhHHhCcCcccCCCCCCcccccccccCccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhh
Confidence 433333445666 7 7999999999865321110 012345789999887654421
Q ss_pred -CCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEe-cCCCCHHHHHHHHHhCCCeeeccCCC-CHHHHhccCCC
Q psy8190 113 -DGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLT-LGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIST 189 (348)
Q Consensus 113 -~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~-~g~l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~~ 189 (348)
..++.|.|++||+ |... +.+.++++.+++.++.+.+. .|.+ ++.++.| |.+.+.+++++ +++.++.+++.
T Consensus 125 ~~~~~~i~~s~gGE-Pll~--~~l~~li~~~~~~g~~~~l~TNG~~-~~~l~~L---~~~~v~isld~~~~~~~~~i~~~ 197 (311)
T 2z2u_A 125 ALEPKHVAISLSGE-PTLY--PYLDELIKIFHKNGFTTFVVSNGIL-TDVIEKI---EPTQLYISLDAYDLDSYRRICGG 197 (311)
T ss_dssp HTSCCEEEECSSSC-GGGS--TTHHHHHHHHHHTTCEEEEEECSCC-HHHHHHC---CCSEEEEECCCSSTTTC----CC
T ss_pred ccCCCEEEEeCCcC-ccch--hhHHHHHHHHHHCCCcEEEECCCCC-HHHHHhC---CCCEEEEEeecCCHHHHHHHhCC
Confidence 1246788884445 3222 35888999998888877664 4555 5555555 89999999999 79999999876
Q ss_pred --CCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCC--CCCCCCCHHHH
Q psy8190 190 --RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPL--YGSSILDPLEF 265 (348)
Q Consensus 190 --~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l--~~~~~~~~~~~ 265 (348)
.++++++++++.+++.| .+...+++..|.+. ++.+.++++.+++ ++.+.+.+|+|.++++. ....+++.++.
T Consensus 198 ~~~~~~~v~~~i~~l~~~g-~v~i~~~~~~g~n~-~~~~~~~~~~~~~--~~~i~l~~~~p~g~~~~~~~~~~~~~~~e~ 273 (311)
T 2z2u_A 198 KKEYWESILNTLDILKEKK-RTCIRTTLIRGYND-DILKFVELYERAD--VHFIELKSYMHVGYSQKRLKKEDMLQHDEI 273 (311)
T ss_dssp CHHHHHHHHHHHHHHTTSS-SEEEEEEECTTTTC-CGGGTHHHHHHHT--CSEEEEEECC------------CCCCHHHH
T ss_pred ccchHHHHHHHHHHHHhcC-CEEEEEEEECCcch-hHHHHHHHHHHcC--CCEEEEEeeEEccccccccccccCCCHHHH
Confidence 68999999999999999 66655444335555 7788888888898 89999999999988873 22357888988
Q ss_pred HHHHHHHHH
Q psy8190 266 IRTIAVARI 274 (348)
Q Consensus 266 ~~~~a~~R~ 274 (348)
.+....++.
T Consensus 274 ~~~~~~l~~ 282 (311)
T 2z2u_A 274 LKLAKMLDE 282 (311)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 888877764
No 10
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.57 E-value=1.3e-13 Score=129.99 Aligned_cols=198 Identities=14% Similarity=0.163 Sum_probs=146.8
Q ss_pred cCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHh----------CCCCEEEEeccCCCCCcccHHHHHHHHHH
Q psy8190 72 TGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS----------DGATRFCMGAAWRELKDRDLDNIENMICE 141 (348)
Q Consensus 72 t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~----------~G~~~i~l~gg~~~~~~~~~~~~~~l~~~ 141 (348)
+.+|+.+|.||..... . ..+.++++||++++..... .++..|.|.|+|+ | ....+.+.++++.
T Consensus 122 q~GCnl~C~fC~tg~~---g--~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGE-P-Lln~d~v~~~i~~ 194 (404)
T 3rfa_A 122 QVGCALECKFCSTAQQ---G--FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE-P-LLNLNNVVPAMEI 194 (404)
T ss_dssp EEECSSCCTTCGGGTT---C--EEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSC-G-GGCHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCCCC---C--CCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCC-c-ccCHHHHHHHHHH
Confidence 5789999999986542 1 1235899999998876543 2478899987656 3 3567889999999
Q ss_pred HHh-cCc-----EEEEe-cCCCCHHHHHHHHHhCCCeeeccCCC-CHHHHhccCC---CCCHHHHHHHHH-HHHHcCC--
Q psy8190 142 VKK-IGL-----ETCLT-LGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIS---TRDYENRLNTLK-NVRNVGI-- 207 (348)
Q Consensus 142 i~~-~~~-----~i~~~-~g~l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~---~~~~~~~~~~i~-~~~~~G~-- 207 (348)
+++ .|+ .++++ .|.+ +.++.|.+.+...+.+++.+ +++.++.+.+ ..+.++++++++ .+.+.|.
T Consensus 195 lk~~~Gl~~s~r~itlsTnG~~--p~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~ 272 (404)
T 3rfa_A 195 MLDDFGFGLSKRRVTLSTSGVV--PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ 272 (404)
T ss_dssp HHSTTTTCCCGGGEEEEESCCH--HHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTT
T ss_pred HHhhcCcCcCCCceEEECCCcH--HHHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCc
Confidence 998 477 67764 5655 45788888876677899999 7999998875 568999999995 4556676
Q ss_pred -eee--EeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceecc
Q psy8190 208 -NIC--CGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMS 284 (348)
Q Consensus 208 -~i~--~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s 284 (348)
.+. ..+|-|+.++.+++.+.+++++.++ ..+.+.+|.|.++++ .++++.+++.+...+++..--...|+-+
T Consensus 273 ~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~---~~VnLIpynP~~~~~---~~~ps~e~i~~f~~iL~~~Gi~vtiR~~ 346 (404)
T 3rfa_A 273 GRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPFPGAP---YGRSSNSRIDRFSKVLMSYGFTTIVRKT 346 (404)
T ss_dssp TCEEEEEEEBTTTTCSHHHHHHHHHHTTTSC---EEEEEEECCCCTTCC---CCBCCHHHHHHHHHHHHHTTCEEEECCC
T ss_pred ccEEEEEEEecCCCCCHHHHHHHHHHHHcCC---CcEEEEeccCCCCCC---CCCCCHHHHHHHHHHHHHcCCcEEEcCC
Confidence 554 4555677889999999999999885 467788888887765 4677888888888877764333345444
No 11
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.51 E-value=3.8e-13 Score=128.43 Aligned_cols=192 Identities=16% Similarity=0.168 Sum_probs=136.9
Q ss_pred EEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHh-CCCCEEEEeccCCCCCcccHHHHHHHHHHHHh
Q psy8190 66 VLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKS-DGATRFCMGAAWRELKDRDLDNIENMICEVKK 144 (348)
Q Consensus 66 ~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~-~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~ 144 (348)
..+.+ |++|+.+|.||....... . ....++.+++.+.++.+.+ .|+..|.|+|| + |.....+.+.++++.+++
T Consensus 117 v~l~v-T~~Cnl~C~yC~~~~~~~-~--~~~~ls~eei~~~i~~i~~~~gi~~V~ltGG-E-Pll~~d~~L~~il~~l~~ 190 (416)
T 2a5h_A 117 VLLLI-TDMCSMYCRHCTRRRFAG-Q--SDDSMPMERIDKAIDYIRNTPQVRDVLLSGG-D-ALLVSDETLEYIIAKLRE 190 (416)
T ss_dssp EEEEE-ESCCSSCCTTCTTTTTTT-S--SSSBCCHHHHHHHHHHHHTCTTCCEEEEEES-C-TTSSCHHHHHHHHHHHHT
T ss_pred EEEec-CCCccccCcCCCCcccCC-C--ccCCCCHHHHHHHHHHHHhcCCCcEEEEECC-C-CCCCCHHHHHHHHHHHHh
Confidence 35677 999999999997664321 1 2224789999999988887 68999999987 3 333344468888888887
Q ss_pred c-Cc-EEEEe-c------CCCCHHHHHHHHHhCCCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeE-
Q psy8190 145 I-GL-ETCLT-L------GMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGG- 213 (348)
Q Consensus 145 ~-~~-~i~~~-~------g~l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~- 213 (348)
. ++ .+.+. . ..++++.++.|+++ +.+.+++++ .+ +.+. ++++++++.++++|+.+....
T Consensus 191 ~~~v~~i~i~Tng~~~~p~~it~e~l~~L~~~--~~v~Isl~~~~~---~ei~-----~~v~~ai~~L~~aGi~v~i~~v 260 (416)
T 2a5h_A 191 IPHVEIVRIGSRTPVVLPQRITPELVNMLKKY--HPVWLNTHFNHP---NEIT-----EESTRACQLLADAGVPLGNQSV 260 (416)
T ss_dssp STTCCEEEEECSHHHHCGGGCCHHHHHHHGGG--CSEEEEECCCSG---GGCC-----HHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCccEEEEEecccccccccCCHHHHHHHHhc--CcEEEEEecCCH---HHHh-----HHHHHHHHHHHHcCCEEEEEEE
Confidence 5 33 33332 2 25789999999999 788888888 45 2332 899999999999999765543
Q ss_pred -eeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q psy8190 214 -IIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPT 278 (348)
Q Consensus 214 -i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~ 278 (348)
+-|+.++.+++.+.++++.+++ +....++.+.+.+||+.+. .+..+..+++..++..+++
T Consensus 261 ll~GvNd~~e~l~~l~~~l~~lg--v~~~~i~~~~~~~g~~~~~---~~~~~~~eil~~l~~~~~G 321 (416)
T 2a5h_A 261 LLRGVNDCVHVMKELVNKLVKIR--VRPYYIYQCDLSLGLEHFR---TPVSKGIEIIEGLRGHTSG 321 (416)
T ss_dssp CCTTTTCSHHHHHHHHHHHHHTT--EEEEEEECCCCBTTCGGGC---CCHHHHHHHHHTTBTTBCG
T ss_pred EECCCCCCHHHHHHHHHHHHHcC--CceEEEeecCCCCCccccc---CCcccHHHHHHHHHHHCCC
Confidence 3377888889999999999998 6555455444467887543 4556666666666654443
No 12
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.01 E-value=1.1e-08 Score=86.16 Aligned_cols=153 Identities=10% Similarity=0.052 Sum_probs=113.1
Q ss_pred CEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEe-cCCCCHHHHHHHHHhCCCeeeccCCC-CHHHHhccCCCCCHH
Q psy8190 116 TRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLT-LGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYE 193 (348)
Q Consensus 116 ~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~-~g~l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~~~~~~ 193 (348)
..|.|+|| + | ....+.+.++++.+++.++.+.+. .|.++++.++.|.++ ++.+.+++.+ +++.++.++. .+++
T Consensus 5 ~~v~~tGG-E-P-ll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g-~~~~ 79 (182)
T 3can_A 5 GGVTFCGG-E-P-LLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRN-CELLLIDLKSMDSTVHQTFCD-VPNE 79 (182)
T ss_dssp CCEEECSS-T-G-GGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHS-SCSH
T ss_pred CEEEEEcc-c-c-cCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhC-CCHH
Confidence 45788887 4 3 234455579999999888777654 678889999999988 8999999999 7999988875 3469
Q ss_pred HHHHHHHHHHHcCCeeeEe--EeeecCCCHHHHHHHHHHHHhc-CCCC-CeeecccccccCCCC---------CCCCCCC
Q psy8190 194 NRLNTLKNVRNVGINICCG--GIIGLSESRDQRAELIFQLANL-NPYP-ESVPINNLVQIKGTP---------LYGSSIL 260 (348)
Q Consensus 194 ~~~~~i~~~~~~G~~i~~~--~i~Glget~e~~~~~l~~l~~l-~~~~-~~i~~~~l~P~~gT~---------l~~~~~~ 260 (348)
.+++.++.+++.|+.+... ++-|+.++.+++.+.++++.++ + + ..+.+.++.|..... +.+.+++
T Consensus 80 ~i~~~i~~l~~~g~~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g--~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~~~ 157 (182)
T 3can_A 80 LILKNIRRVAEADFPYYIRIPLIEGVNADEKNIKLSAEFLASLPR--HPEIINLLPYHDIGKGKHAKLGSIYNPKGYKMQ 157 (182)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECBTTTCSHHHHHHHHHHHHHSSS--CCSEEEEEECCC------------------CCB
T ss_pred HHHHHHHHHHhCCCeEEEEEEEECCCCCCHHHHHHHHHHHHhCcC--ccceEEEecCcccCHHHHHHhCCcCcccCCCCC
Confidence 9999999999999866544 4445568899999999999999 7 7 788899999876543 3334556
Q ss_pred CHHH--HHHHHHHHHHH
Q psy8190 261 DPLE--FIRTIAVARIT 275 (348)
Q Consensus 261 ~~~~--~~~~~a~~R~~ 275 (348)
+.++ +.++...++..
T Consensus 158 ~~e~~~l~~~~~~~~~~ 174 (182)
T 3can_A 158 TPSEEVQQQCIQILTDY 174 (182)
T ss_dssp CCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHc
Confidence 6666 77777777653
No 13
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=98.57 E-value=3.9e-06 Score=76.25 Aligned_cols=220 Identities=14% Similarity=0.106 Sum_probs=147.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc-ccHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKD-RDLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~-~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.++.++.++.+.+.|++.|-++++. +|.. .......++++.+++. +..+.+-. .+.+.++...++|++.+.+.
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~-~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~ag~~~v~i~ 100 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFV-SPKWVPQMGDHTEVLKGIQKFPGINYPVLT--PNLKGFEAAVAAGAKEVVIF 100 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECC-CTTTCGGGTTHHHHHHHSCCCTTCBCCEEC--CSHHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCc-CcccccccCCHHHHHHHHhhCCCCEEEEEc--CCHHhHHHHHHCCCCEEEEE
Confidence 789999999999999999998776642 2210 1112234555555543 44433222 46788999999999999987
Q ss_pred CCCCHH-HHhccCCC--CCHHHHHHHHHHHHHcCCeeeEeEeeec-C-----CCHHHHHHHHHHHHhcCCCCCeeecccc
Q psy8190 176 LDTSPK-LYGDIIST--RDYENRLNTLKNVRNVGINICCGGIIGL-S-----ESRDQRAELIFQLANLNPYPESVPINNL 246 (348)
Q Consensus 176 ~et~~e-~l~~i~~~--~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-g-----et~e~~~~~l~~l~~l~~~~~~i~~~~l 246 (348)
.-+++. ..+.+++. ..++...+.++.+++.|+.+..++++-+ . .+++.+.+.++.+.+++ ++.+.+.
T Consensus 101 ~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l~-- 176 (298)
T 2cw6_A 101 GAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMG--CYEISLG-- 176 (298)
T ss_dssp EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTT--CSEEEEE--
T ss_pred ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC--CCEEEec--
Confidence 665543 33455543 3667888889999999999988877544 1 36889999999999998 7776554
Q ss_pred cccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc-cc--hhhHHHHHHhCccee---ee--CC-eecc--C
Q psy8190 247 VQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE-MG--ETTQAFCFLAGANSI---FY--GD-KLLT--T 315 (348)
Q Consensus 247 ~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~-l~--~~~~~~~l~~GAn~~---~~--~~-~~~~--~ 315 (348)
.| ....+|.++.+++...|..+|+..+.+- -|+ ++ .-....++.+||+.+ +. |+ -+.. +
T Consensus 177 ----DT----~G~~~P~~~~~lv~~l~~~~~~~~i~~H--~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~a 246 (298)
T 2cw6_A 177 ----DT----IGVGTPGIMKDMLSAVMQEVPLAALAVH--CHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGAS 246 (298)
T ss_dssp ----ET----TSCCCHHHHHHHHHHHHHHSCGGGEEEE--EBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSC
T ss_pred ----CC----CCCcCHHHHHHHHHHHHHhCCCCeEEEE--ECCCCchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCc
Confidence 23 2346889999999999988886433321 122 22 223466899999977 11 22 1111 1
Q ss_pred CCCCchHHHHHHHHcCCCc
Q psy8190 316 DNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 316 ~g~~~~~~~~~i~~~G~~p 334 (348)
.+...+++..+++..|+.+
T Consensus 247 GN~~~E~lv~~l~~~g~~~ 265 (298)
T 2cw6_A 247 GNLATEDLVYMLEGLGIHT 265 (298)
T ss_dssp CBCBHHHHHHHHHHHTCBC
T ss_pred CChhHHHHHHHHHhcCCCC
Confidence 2233478888999999874
No 14
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=98.47 E-value=2.1e-07 Score=86.23 Aligned_cols=161 Identities=14% Similarity=0.233 Sum_probs=97.5
Q ss_pred EEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHH-HHhCCCC--EEEEeccCCCCCcccHHH----HHHHHH
Q psy8190 68 LSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQK-AKSDGAT--RFCMGAAWRELKDRDLDN----IENMIC 140 (348)
Q Consensus 68 i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~-~~~~G~~--~i~l~gg~~~~~~~~~~~----~~~l~~ 140 (348)
++. ..||++.|.||.....++....-....+.+++++.++. +.+.+.. .|.+++ .++|. +.+. ..++++
T Consensus 111 ln~-y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~~~~~~~i~~g~-~TDpy--p~E~~~~ltr~~le 186 (368)
T 4fhd_A 111 IPL-ATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINERAPEITRFEAAC-TSDIV--GIDHLTHSLKKAIE 186 (368)
T ss_dssp CCS-EEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHHTTSCEEEESCS-SBCHH--HHHTTTCHHHHHHH
T ss_pred eCC-ccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhcCCCceEEEEEc-CCCcc--hhhHHHhHHHHHHH
Confidence 555 89999999999966544321101113678999988764 3333433 343333 23432 3443 445556
Q ss_pred HHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-
Q psy8190 141 EVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL- 217 (348)
Q Consensus 141 ~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl- 217 (348)
.+.+. +..+.+......-+.+..+...|...|.+++-+ +++.+.+-++ -+.++++++++.++++|+++.+.+.-=+
T Consensus 187 ~l~~~~~~~v~i~TKs~lid~L~~l~~~~~v~V~~Sitt-~~l~r~~EP~aps~~~RL~Ai~~l~~aGipv~v~iaPIiP 265 (368)
T 4fhd_A 187 FIGATDYGRLRFVTKYEHVDHLLDARHNGKTRFRFSINS-RYVINHFEPGTSSFDGRLAAARKVAGAGYKLGFVVAPIYR 265 (368)
T ss_dssp HHHHCSSEEEEEEESCCCCGGGTTCCCTTCEEEEEEECC-HHHHHHHCTTSCCHHHHHHHHHHHHHTTCEEEEEEEEECC
T ss_pred HHHhCCCceEEEEeCCcCHHHHHhcCcCCceEEEEEEcC-HHHHHHcCCCCCCHHHHHHHHHHHHHCCCeEEEEEeCcCC
Confidence 66654 445554433222233444545565666666644 6777777764 5899999999999999999876654444
Q ss_pred CCCH-HHHHHHHHHHHh
Q psy8190 218 SESR-DQRAELIFQLAN 233 (348)
Q Consensus 218 get~-e~~~~~l~~l~~ 233 (348)
+++. ++..+.++.+.+
T Consensus 266 ~~~~~e~y~~lle~l~~ 282 (368)
T 4fhd_A 266 HEGWERGYFELFQELAR 282 (368)
T ss_dssp CTTHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 5544 566677766555
No 15
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=98.40 E-value=2.4e-05 Score=70.89 Aligned_cols=220 Identities=14% Similarity=0.086 Sum_probs=144.5
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCccc-HHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRD-LDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~-~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.++.++.++.+.+.|+..|-+++.. .+...+ .....++++.+++. ++.+.+-. .+.+.++...++|++.|.+.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~-~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~--~n~~~i~~a~~~G~~~V~i~ 99 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFV-SPKWVPQLADSREVMAGIRRADGVRYSVLV--PNMKGYEAAAAAHADEIAVF 99 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECS-CTTTCGGGTTHHHHHHHSCCCSSSEEEEEC--SSHHHHHHHHHTTCSEEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCc-CccccccccCHHHHHHHHHhCCCCEEEEEe--CCHHHHHHHHHCCCCEEEEE
Confidence 789999999999999999998776532 222111 12345666766654 66665443 56889999999999999886
Q ss_pred CCCCHHHHh-ccCCC--CCHHHHHHHHHHHHHcCCeeeEeEe--eec----CCCHHHHHHHHHHHHhcCCCCCeeecccc
Q psy8190 176 LDTSPKLYG-DIIST--RDYENRLNTLKNVRNVGINICCGGI--IGL----SESRDQRAELIFQLANLNPYPESVPINNL 246 (348)
Q Consensus 176 ~et~~e~l~-~i~~~--~~~~~~~~~i~~~~~~G~~i~~~~i--~Gl----get~e~~~~~l~~l~~l~~~~~~i~~~~l 246 (348)
+-+++...+ .++++ .+.+...++++.+++.|+.+...+. +|. -.+++.+.+.++.+.+.+ ++.+.+.-
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G--~d~i~l~D- 176 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLG--CHEVSLGD- 176 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHT--CSEEEEEE-
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC--CCEEEecC-
Confidence 655543332 23322 2456666778999999998875554 443 247888999999999998 88877652
Q ss_pred cccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCcceee---eC--C-eecc--C
Q psy8190 247 VQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSIF---YG--D-KLLT--T 315 (348)
Q Consensus 247 ~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~~---~~--~-~~~~--~ 315 (348)
| ....+|.+..+++...+..+|...+.+-. |+ +.......++.+||+.+- .| + -+.. +
T Consensus 177 -----t----~G~~~P~~~~~lv~~l~~~~~~~~l~~H~--Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~ 245 (295)
T 1ydn_A 177 -----T----IGRGTPDTVAAMLDAVLAIAPAHSLAGHY--HDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPGAK 245 (295)
T ss_dssp -----T----TSCCCHHHHHHHHHHHHTTSCGGGEEEEE--BCTTSCHHHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSC
T ss_pred -----C----CCCcCHHHHHHHHHHHHHhCCCCeEEEEE--CCCcchHHHHHHHHHHhCCCEEEeccccCCCCCCCCCCc
Confidence 1 12357889999999888877742222211 21 223345678999999882 12 1 1111 1
Q ss_pred CCCCchHHHHHHHHcCCCc
Q psy8190 316 DNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 316 ~g~~~~~~~~~i~~~G~~p 334 (348)
.+...+++..+++..|+.+
T Consensus 246 GN~~~e~lv~~l~~~g~~~ 264 (295)
T 1ydn_A 246 GNVDTVAVVEMLHEMGFET 264 (295)
T ss_dssp CBCBHHHHHHHHHHTTCBC
T ss_pred CChhHHHHHHHHHhcCCCC
Confidence 2233578888899999874
No 16
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=98.30 E-value=0.0001 Score=66.92 Aligned_cols=221 Identities=15% Similarity=0.087 Sum_probs=144.6
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc-ccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKD-RDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~-~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
.++.++.++.++.+.+.|+..|-.+++ -++.. .......++++.+.+ .+..+.+.. .+.+.++...++|++.|.+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSF-VSPKWVPQMAGSAEVFAGIRQRPGVTYAALA--PNLKGFEAALESGVKEVAV 102 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEEC-SCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC--CSHHHHHHHHHTTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCC-cCccccccccCHHHHHHHhhhcCCCEEEEEe--CCHHHHHHHHhCCcCEEEE
Confidence 378999999999999999999877653 12211 111223345555543 355665444 4788999999999999987
Q ss_pred cCCCCHH-HHhccCCC--CCHHHHHHHHHHHHHcCCeeeEeEeeecC------CCHHHHHHHHHHHHhcCCCCCeeeccc
Q psy8190 175 NLDTSPK-LYGDIIST--RDYENRLNTLKNVRNVGINICCGGIIGLS------ESRDQRAELIFQLANLNPYPESVPINN 245 (348)
Q Consensus 175 g~et~~e-~l~~i~~~--~~~~~~~~~i~~~~~~G~~i~~~~i~Glg------et~e~~~~~l~~l~~l~~~~~~i~~~~ 245 (348)
..-+++- ..+.++.+ .+.+...+.++.+++.|+.+...+.+-++ -+++.+.+.++.+.+.+ ++.+.+.
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G--~d~i~l~- 179 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMG--CYEVSLG- 179 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTT--CSEEEEE-
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC--CCEEEEe-
Confidence 6655543 33445433 25566778889999999988766655332 36788889999899998 8876655
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCccee---ee--CC-eecc--
Q psy8190 246 LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSI---FY--GD-KLLT-- 314 (348)
Q Consensus 246 l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~---~~--~~-~~~~-- 314 (348)
.|- ...+|.+..+++...+..+|+..+.+-. |+ +.......++.+||+.+ +. |+ -+..
T Consensus 180 -----DT~----G~~~P~~~~~lv~~l~~~~~~~~l~~H~--Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~cp~a~gr 248 (302)
T 2ftp_A 180 -----DTI----GVGTAGATRRLIEAVASEVPRERLAGHF--HDTYGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGA 248 (302)
T ss_dssp -----ESS----SCCCHHHHHHHHHHHTTTSCGGGEEEEE--BCTTSCHHHHHHHHHHTTCCEEEEBGGGCCBCGGGTTC
T ss_pred -----CCC----CCcCHHHHHHHHHHHHHhCCCCeEEEEe--CCCccHHHHHHHHHHHhCCCEEEecccccCCCCCCCCC
Confidence 221 1257888888888888777753332211 21 22345667899999988 22 22 1111
Q ss_pred CCCCCchHHHHHHHHcCCCc
Q psy8190 315 TDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 315 ~~g~~~~~~~~~i~~~G~~p 334 (348)
+.+...+++..+++..|+.+
T Consensus 249 ~GN~~~E~lv~~l~~~g~~~ 268 (302)
T 2ftp_A 249 TGNVASEDVLYLLNGLEIHT 268 (302)
T ss_dssp BCBCBHHHHHHHHHHTTCBC
T ss_pred CCChhHHHHHHHHHhcCCCC
Confidence 12333578888999999874
No 17
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=98.26 E-value=0.00012 Score=66.62 Aligned_cols=221 Identities=12% Similarity=0.091 Sum_probs=144.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc-ccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKD-RDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~-~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
.++.++.++.++.+.+.|++.|-++++ -+|.. .......++++.+++ .+..+.+-. .+.+.++...++|++.+.+
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~-~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~~g~~~v~i 100 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSF-VHPKWIPALRDAIDVAKGIDREKGVTYAALV--PNQRGLENALEGGINEACV 100 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEEC-SCTTTCGGGTTHHHHHHHSCCCTTCEEEEEC--CSHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCC-cCcccccccCCHHHHHHHhhhcCCCeEEEEe--CCHHhHHHHHhCCcCEEEE
Confidence 378999999999999999999987654 22211 111122344555543 245544322 3577899999999999998
Q ss_pred cCCCCHH-HHhccCCC--CCHHHHHHHHHHHHHcCCeeeEeEeeecC------CCHHHHHHHHHHHHhcCCCCCeeeccc
Q psy8190 175 NLDTSPK-LYGDIIST--RDYENRLNTLKNVRNVGINICCGGIIGLS------ESRDQRAELIFQLANLNPYPESVPINN 245 (348)
Q Consensus 175 g~et~~e-~l~~i~~~--~~~~~~~~~i~~~~~~G~~i~~~~i~Glg------et~e~~~~~l~~l~~l~~~~~~i~~~~ 245 (348)
..-+++- ....+++. ...+...+.++.+++.|+.+...+++-++ -+++.+.+.++.+.+++ ++.+.+.
T Consensus 101 ~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l~- 177 (307)
T 1ydo_A 101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFG--ISELSLG- 177 (307)
T ss_dssp EEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHT--CSCEEEE-
T ss_pred EeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC--CCEEEEc-
Confidence 7755543 23344432 24566688899999999998877766542 36788999999999998 7765433
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCccee---ee--CC-eec--c
Q psy8190 246 LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSI---FY--GD-KLL--T 314 (348)
Q Consensus 246 l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~---~~--~~-~~~--~ 314 (348)
.| ....+|.++.+++...|..+|+..+.+-. || +..-....++.+||+.+ +. |+ -+. .
T Consensus 178 -----DT----~G~~~P~~v~~lv~~l~~~~~~~~l~~H~--Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGecp~a~gr 246 (307)
T 1ydo_A 178 -----DT----IGAANPAQVETVLEALLARFPANQIALHF--HDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGS 246 (307)
T ss_dssp -----CS----SCCCCHHHHHHHHHHHHTTSCGGGEEEEC--BGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEETTEEEE
T ss_pred -----CC----CCCcCHHHHHHHHHHHHHhCCCCeEEEEE--CCCCchHHHHHHHHHHhCCCEEEEcccccCCCCCCCCC
Confidence 33 13467899999999998888754333211 22 22334567899999988 22 22 000 1
Q ss_pred CCCCCchHHHHHHHHcCCCc
Q psy8190 315 TDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 315 ~~g~~~~~~~~~i~~~G~~p 334 (348)
+.+...+++..+++..|+.+
T Consensus 247 aGN~~~E~lv~~L~~~g~~t 266 (307)
T 1ydo_A 247 SGNAATEDIVYMLEQMDIKT 266 (307)
T ss_dssp ECBCBHHHHHHHHHHTTCBC
T ss_pred CCChhHHHHHHHHHhcCCCC
Confidence 22344578888999999874
No 18
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=98.16 E-value=0.00019 Score=66.17 Aligned_cols=216 Identities=14% Similarity=0.135 Sum_probs=142.5
Q ss_pred cCHHHHHHHHH-HHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh----cCcEEEEecCCCCHHHHHHHHHhCCCee
Q psy8190 98 LSIESVITAAQ-KAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK----IGLETCLTLGMLNENQAYRLKKVGLDYY 172 (348)
Q Consensus 98 ~~~eei~~~~~-~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~----~~~~i~~~~g~l~~e~l~~Lk~aG~~~i 172 (348)
++.++.++.++ .+.+.|+..|-++++..+ +.+.+.+..+.+.... .+..+.+-.- ....++...++|++.+
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~--~~~~i~~a~~~g~~~v 113 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARVS--KGELETVQKIMEWAATEQLTERIEILGFVD--GNKTVDWIKDSGAKVL 113 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTSC--TTHHHHHHHHHHHHHHTTCGGGEEEEEESS--TTHHHHHHHHHTCCEE
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCCCC--hhHHHHHHHHHhhhhhhccCCCCeEEEEcc--chhhHHHHHHCCCCEE
Confidence 78999999999 999999999987665322 2345555555543211 1334432111 1227999999999999
Q ss_pred eccCCCCHH-HHhccCCC--CCHHHHHHHHHHHHHcCCeeeEeEee---ecCCCHHHHHHHHHHHHhcCCCCCeeecccc
Q psy8190 173 NHNLDTSPK-LYGDIIST--RDYENRLNTLKNVRNVGINICCGGII---GLSESRDQRAELIFQLANLNPYPESVPINNL 246 (348)
Q Consensus 173 ~~g~et~~e-~l~~i~~~--~~~~~~~~~i~~~~~~G~~i~~~~i~---Glget~e~~~~~l~~l~~l~~~~~~i~~~~l 246 (348)
.+..-+++. ....++.. ...+...+.++.+++.|+.+..++.. +.-.+++.+.+.++.+.+++ ++.|.+
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l--- 188 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEH--IERIFL--- 188 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSC--CSEEEE---
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcC--CCEEEE---
Confidence 987766643 33445443 25567778889999999998877665 43456788888999999998 766543
Q ss_pred cccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCcceee---e--CCeeccCCCC
Q psy8190 247 VQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSIF---Y--GDKLLTTDNT 318 (348)
Q Consensus 247 ~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~~---~--~~~~~~~~g~ 318 (348)
+.| ....+|.+..+++...|..+|+..|.+-. |+ +..-....|+.+||+.+- . |+ .+.+.
T Consensus 189 ---~DT----~G~~~P~~v~~lv~~l~~~~p~~~i~~H~--Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~---~aGN~ 256 (337)
T 3ble_A 189 ---PDT----LGVLSPEETFQGVDSLIQKYPDIHFEFHG--HNDYDLSVANSLQAIRAGVKGLHASINGLGE---RAGNT 256 (337)
T ss_dssp ---ECT----TCCCCHHHHHHHHHHHHHHCTTSCEEEEC--BCTTSCHHHHHHHHHHTTCSEEEEBGGGCSS---TTCBC
T ss_pred ---ecC----CCCcCHHHHHHHHHHHHHhcCCCeEEEEe--cCCcchHHHHHHHHHHhCCCEEEEecccccc---cccch
Confidence 233 23467899999999999888864443321 22 223345668999999982 2 22 22334
Q ss_pred CchHHHHHHHHc-CCCc
Q psy8190 319 KTNDDSKLLKKL-GINT 334 (348)
Q Consensus 319 ~~~~~~~~i~~~-G~~p 334 (348)
..+++..+++.. |+.+
T Consensus 257 ~~E~lv~~L~~~~g~~t 273 (337)
T 3ble_A 257 PLEALVTTIHDKSNSKT 273 (337)
T ss_dssp BHHHHHHHHHHHSSCCC
T ss_pred hHHHHHHHHHHhcCCCC
Confidence 457888888887 8763
No 19
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=97.84 E-value=0.0017 Score=58.50 Aligned_cols=217 Identities=13% Similarity=0.051 Sum_probs=134.3
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHH----HHHhCCCee
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYR----LKKVGLDYY 172 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~----Lk~aG~~~i 172 (348)
.++.++.++.++.+.+.|++.|-.+... ..+.+.+.+..+.+.+ .+..+.+-.- -.++.++. ++++|+++|
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~--~~~~d~e~v~~i~~~~--~~~~i~~l~~-~~~~di~~a~~~~~~ag~~~v 97 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPI--SSPGDFECVKAIAKAI--KHCSVTGLAR-CVEGDIDRAEEALKDAVSPQI 97 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGG--GCHHHHHHHHHHHHHC--CSSEEEEEEE-SSHHHHHHHHHHHTTCSSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCC--CCccHHHHHHHHHHhc--CCCEEEEEec-CCHHHHHHHHHHHhhcCCCEE
Confidence 3789999999999999999998775431 1122334444433322 2444432111 12333444 444799998
Q ss_pred eccCCCCHHH-HhccCCC--CCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccccccc
Q psy8190 173 NHNLDTSPKL-YGDIIST--RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQI 249 (348)
Q Consensus 173 ~~g~et~~e~-l~~i~~~--~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~ 249 (348)
.+.+-+++-. ...++.. ...+...+.++.+++.|+.+..+...+..-+++.+.+.++.+.+++ ++.|.+
T Consensus 98 ~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G--~~~i~l------ 169 (293)
T 3ewb_X 98 HIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAG--ATVINI------ 169 (293)
T ss_dssp EEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTT--CCEEEE------
T ss_pred EEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcC--CCEEEe------
Confidence 8776555432 2344332 2445566777888899998876666554567888899999999998 665543
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCc-eeccccccc---cchhhHHHHHHhCccee---ee--CCeeccCCCCCc
Q psy8190 250 KGTPLYGSSILDPLEFIRTIAVARITMPTSR-IRMSAGRKE---MGETTQAFCFLAGANSI---FY--GDKLLTTDNTKT 320 (348)
Q Consensus 250 ~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~-i~~s~g~~~---l~~~~~~~~l~~GAn~~---~~--~~~~~~~~g~~~ 320 (348)
+.|- ...+|.++.+++...+..+|+.. +.++..-|+ +..-....++.+||+.+ +. |+ .+.+...
T Consensus 170 ~DT~----G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~GlGe---raGN~~~ 242 (293)
T 3ewb_X 170 PDTV----GYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGIGE---RAGNTAL 242 (293)
T ss_dssp ECSS----SCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCT---TTCBCBH
T ss_pred cCCC----CCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeecccccc---ccccHhH
Confidence 2332 34678899999999999898632 333322232 22334566899999988 11 22 1233445
Q ss_pred hHHHHHHHH----cCCC
Q psy8190 321 NDDSKLLKK----LGIN 333 (348)
Q Consensus 321 ~~~~~~i~~----~G~~ 333 (348)
+++..+++. .|+.
T Consensus 243 E~vv~~L~~~~~~~g~~ 259 (293)
T 3ewb_X 243 EEVAVALHIRKDFYQAE 259 (293)
T ss_dssp HHHHHHHHHTHHHHCEE
T ss_pred HHHHHHHHhhhhhcCCC
Confidence 777888874 6775
No 20
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=97.84 E-value=0.0013 Score=60.84 Aligned_cols=209 Identities=9% Similarity=0.087 Sum_probs=137.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEe----ccCCCCC-cccHHHHHHHHHHHHhc--CcEEEE--ecCCCCHHHHHHHHHhC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMG----AAWRELK-DRDLDNIENMICEVKKI--GLETCL--TLGMLNENQAYRLKKVG 168 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~----gg~~~~~-~~~~~~~~~l~~~i~~~--~~~i~~--~~g~l~~e~l~~Lk~aG 168 (348)
++.++.++.++.+.+.|+..|-++ .++.+|. ......-.+.++.+++. +..+.+ .++.-..+.++...++|
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aG 106 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAG 106 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCC
Confidence 789999999999999999999875 1111110 00111233455555542 444432 44555688999999999
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccc
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ 248 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P 248 (348)
++.+.+..-.+ ..+...+.++.+++.|+.+...+.-...-+++.+.+.++.+.+.+ ++.+.+
T Consensus 107 vd~v~I~~~~s-----------~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~G--a~~i~l----- 168 (345)
T 1nvm_A 107 ARVVRVATHCT-----------EADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYG--ATCIYM----- 168 (345)
T ss_dssp CCEEEEEEETT-----------CGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHT--CSEEEE-----
T ss_pred cCEEEEEEecc-----------HHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCC--CCEEEE-----
Confidence 99988753222 124567788899999998877765555667888999999999998 665443
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCceeccccccc---cchhhHHHHHHhCccee---ee--CCeeccCCCCC
Q psy8190 249 IKGTPLYGSSILDPLEFIRTIAVARITMP-TSRIRMSAGRKE---MGETTQAFCFLAGANSI---FY--GDKLLTTDNTK 319 (348)
Q Consensus 249 ~~gT~l~~~~~~~~~~~~~~~a~~R~~lp-~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~---~~--~~~~~~~~g~~ 319 (348)
++|- ...++.++.+++...|..+| +..|.+- -|+ +.--....++.+||+.+ +. |+ .+.+..
T Consensus 169 -~DT~----G~~~P~~v~~lv~~l~~~~~~~~pi~~H--~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~---~aGN~~ 238 (345)
T 1nvm_A 169 -ADSG----GAMSMNDIRDRMRAFKAVLKPETQVGMH--AHHNLSLGVANSIVAVEEGCDRVDASLAGMGA---GAGNAP 238 (345)
T ss_dssp -ECTT----CCCCHHHHHHHHHHHHHHSCTTSEEEEE--CBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS---TTCBCB
T ss_pred -CCCc----CccCHHHHHHHHHHHHHhcCCCceEEEE--ECCCccHHHHHHHHHHHcCCCEEEecchhccC---CccCcC
Confidence 3342 22458899999999999886 4333221 132 22334566899999987 22 22 133344
Q ss_pred chHHHHHHHHcCCCc
Q psy8190 320 TNDDSKLLKKLGINT 334 (348)
Q Consensus 320 ~~~~~~~i~~~G~~p 334 (348)
.+++..+++..|+.+
T Consensus 239 le~lv~~L~~~g~~~ 253 (345)
T 1nvm_A 239 LEVFIAVAERLGWNH 253 (345)
T ss_dssp HHHHHHHHHHHTCBC
T ss_pred HHHHHHHHHhcCCCC
Confidence 578888899999874
No 21
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=97.63 E-value=0.0036 Score=57.23 Aligned_cols=217 Identities=14% Similarity=0.112 Sum_probs=135.3
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHh----CCCee
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKV----GLDYY 172 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~a----G~~~i 172 (348)
.++.++.++.++.+.+.|++.|-++.. ..++.+.+.+.++.+.+ .+..+.+- .....+.++.-.++ |+++|
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p--~~~~~d~e~v~~i~~~~--~~~~i~~l-~r~~~~~i~~a~~al~~ag~~~v 98 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGFP--VSSPGDFNSVVEITKAV--TRPTICAL-TRAKEADINIAGEALRFAKRSRI 98 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEECT--TSCHHHHHHHHHHHHHC--CSSEEEEE-CCSCHHHHHHHHHHHTTCSSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCC--CCCHhHHHHHHHHHHhC--CCCEEEEe-ecCCHHHHHHHHHhhcccCCCEE
Confidence 378899999999999999998876431 11222333343333322 24444321 22335555555555 99998
Q ss_pred eccCCCCHHH-HhccCC--CCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccccccc
Q psy8190 173 NHNLDTSPKL-YGDIIS--TRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQI 249 (348)
Q Consensus 173 ~~g~et~~e~-l~~i~~--~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~ 249 (348)
.+..-+++-. ...++. ....+...++++.+++.|+.+..+..++.--+++.+.+.++.+.+.+ ++.|.+
T Consensus 99 ~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G--~~~i~l------ 170 (325)
T 3eeg_A 99 HTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAG--ADVVNI------ 170 (325)
T ss_dssp EEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHT--CSEEEC------
T ss_pred EEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcC--CCEEEe------
Confidence 8766555432 233443 34677888999999999999877777666567888899999999998 665442
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-ceeccccccc---cchhhHHHHHHhCccee---ee--CCeeccCCCCCc
Q psy8190 250 KGTPLYGSSILDPLEFIRTIAVARITMPTS-RIRMSAGRKE---MGETTQAFCFLAGANSI---FY--GDKLLTTDNTKT 320 (348)
Q Consensus 250 ~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~-~i~~s~g~~~---l~~~~~~~~l~~GAn~~---~~--~~~~~~~~g~~~ 320 (348)
+.|- ...+|.++.+++...+..+|+. .+.++..-|+ +..-....++.+||+.+ +. |+ .+.+...
T Consensus 171 ~DT~----G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~GlGe---r~GN~~l 243 (325)
T 3eeg_A 171 PDTT----GYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGIGE---RAGNTAL 243 (325)
T ss_dssp CBSS----SCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGCCS---TTCCCBH
T ss_pred cCcc----CCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEecccccc---cccchhH
Confidence 3332 3467889999999999989862 1333321232 22334566899999998 21 22 1233445
Q ss_pred hHHHHHHHH----cCCC
Q psy8190 321 NDDSKLLKK----LGIN 333 (348)
Q Consensus 321 ~~~~~~i~~----~G~~ 333 (348)
+++..+++. .|+.
T Consensus 244 E~vv~~L~~~~~~~g~~ 260 (325)
T 3eeg_A 244 EEVVMAMECHKETLGLE 260 (325)
T ss_dssp HHHHHHHHHTHHHHCEE
T ss_pred HHHHHHHHhhhhccCCC
Confidence 777777764 5664
No 22
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=97.61 E-value=0.0042 Score=57.78 Aligned_cols=218 Identities=15% Similarity=0.127 Sum_probs=134.1
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHH----HHhCCCee
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRL----KKVGLDYY 172 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~L----k~aG~~~i 172 (348)
.++.++-++.++.+.+.|++.|-.+.. ..++.+.+.+..+.+.+ .+..++.-. ....+.++.- +.+|+++|
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p--~~~~~d~e~v~~i~~~~--~~~~i~~l~-r~~~~di~~a~~al~~ag~~~v 104 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFA--AASPGDFEAVNAIAKTI--TKSTVCSLS-RAIERDIRQAGEAVAPAPKKRI 104 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEG--GGCHHHHHHHHHHHTTC--SSSEEEEEE-ESSHHHHHHHHHHHTTSSSEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCC--CCCHHHHHHHHHHHHhC--CCCeEEEEe-cCCHHHHHHHHHHHhhCCCCEE
Confidence 378999999999999999998866432 11223344444443322 234443211 1134444444 44899999
Q ss_pred eccCCCCHHH-HhccCCC--CCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccccccc
Q psy8190 173 NHNLDTSPKL-YGDIIST--RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQI 249 (348)
Q Consensus 173 ~~g~et~~e~-l~~i~~~--~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~ 249 (348)
.+..-+++-. ...++.. ...+...++++.+++.|..+..+...+.-.+++.+.+.++.+.+.+ .+.|.+
T Consensus 105 ~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~G--a~~i~l------ 176 (370)
T 3rmj_A 105 HTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAG--ATTINI------ 176 (370)
T ss_dssp EEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHT--CCEEEE------
T ss_pred EEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcC--CCEEEe------
Confidence 8877666433 3345432 1345555677888899998776666666667888999999999998 665432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-ceeccccccc---cchhhHHHHHHhCccee---ee--CCeeccCCCCCc
Q psy8190 250 KGTPLYGSSILDPLEFIRTIAVARITMPTS-RIRMSAGRKE---MGETTQAFCFLAGANSI---FY--GDKLLTTDNTKT 320 (348)
Q Consensus 250 ~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~-~i~~s~g~~~---l~~~~~~~~l~~GAn~~---~~--~~~~~~~~g~~~ 320 (348)
+.|- ...+|.++.+++...+..+|+. .+.++..-|| +..-....|+.+||+.+ +. |+ .+.+...
T Consensus 177 ~DT~----G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGe---raGN~~l 249 (370)
T 3rmj_A 177 PDTV----GYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGE---RAGNASV 249 (370)
T ss_dssp ECSS----SCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS---TTCBCBH
T ss_pred cCcc----CCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccCc---ccccccH
Confidence 3342 3467889999999999888862 1333321232 22334566899999998 22 22 1233344
Q ss_pred hHHHHHHHH----cCCCc
Q psy8190 321 NDDSKLLKK----LGINT 334 (348)
Q Consensus 321 ~~~~~~i~~----~G~~p 334 (348)
+++..+++. .|+.+
T Consensus 250 E~vv~~L~~~~~~~g~~t 267 (370)
T 3rmj_A 250 EEIVMALKVRHDLFGLET 267 (370)
T ss_dssp HHHHHHHHHTHHHHCCBC
T ss_pred HHHHHHHHhhhhccCCCC
Confidence 666666653 47753
No 23
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=97.54 E-value=0.0016 Score=63.28 Aligned_cols=211 Identities=15% Similarity=0.177 Sum_probs=134.1
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCC------CCCcccHHHHHHHHHHHHhcCcEEEEe----cCC------CCHHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWR------ELKDRDLDNIENMICEVKKIGLETCLT----LGM------LNENQA 161 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~------~~~~~~~~~~~~l~~~i~~~~~~i~~~----~g~------l~~e~l 161 (348)
++.++.++.++.+.+.|+..|-.+++.. .....+.+.+..+.+.+....+...+. .|. +.+..+
T Consensus 44 ~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~v 123 (539)
T 1rqb_A 44 MAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFV 123 (539)
T ss_dssp CCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHH
Confidence 6789999999999999999998876522 012234444444444333222222221 132 245678
Q ss_pred HHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeE--eeecCCCHHHHHHHHHHHHhcCCCCC
Q psy8190 162 YRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGG--IIGLSESRDQRAELIFQLANLNPYPE 239 (348)
Q Consensus 162 ~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~--i~Glget~e~~~~~l~~l~~l~~~~~ 239 (348)
+...++|++.+.+..-+++ .+...++++.+++.|..+...+ ..|...+++.+++.++.+.+++ ++
T Consensus 124 e~a~~aGvd~vrIf~s~sd-----------~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G--ad 190 (539)
T 1rqb_A 124 DKSAENGMDVFRVFDAMND-----------PRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMG--AD 190 (539)
T ss_dssp HHHHHTTCCEEEECCTTCC-----------THHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTT--CS
T ss_pred HHHHhCCCCEEEEEEehhH-----------HHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcC--CC
Confidence 9999999998886543321 1556789999999999875554 4455678999999999999998 76
Q ss_pred eeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCceeccccccc---cchhhHHHHHHhCccee---eeCCee
Q psy8190 240 SVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMP-TSRIRMSAGRKE---MGETTQAFCFLAGANSI---FYGDKL 312 (348)
Q Consensus 240 ~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp-~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~---~~~~~~ 312 (348)
.|.+ +.|- ...+|.++.+++...|..+| +..|.+- -|+ +..-....|+.+||+.+ +.|- -
T Consensus 191 ~I~L------~DT~----G~~~P~~v~~lv~~l~~~~p~~i~I~~H--~Hnd~GlAvAN~laAveAGa~~VD~ti~g~-G 257 (539)
T 1rqb_A 191 SIAL------KDMA----ALLKPQPAYDIIKAIKDTYGQKTQINLH--CHSTTGVTEVSLMKAIEAGVDVVDTAISSM-S 257 (539)
T ss_dssp EEEE------EETT----CCCCHHHHHHHHHHHHHHHCTTCCEEEE--EBCTTSCHHHHHHHHHHTTCSEEEEBCGGG-C
T ss_pred EEEe------CCCC----CCcCHHHHHHHHHHHHHhcCCCceEEEE--eCCCCChHHHHHHHHHHhCCCEEEEecccc-C
Confidence 5443 2221 34578899999999888887 4333321 132 12234566899999988 2110 0
Q ss_pred ccCCCCCchHHHHHHHHcCCCc
Q psy8190 313 LTTDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 313 ~~~~g~~~~~~~~~i~~~G~~p 334 (348)
-.+.+...+.+..+++..|+.+
T Consensus 258 ertGN~~lE~lv~~L~~~g~~t 279 (539)
T 1rqb_A 258 LGPGHNPTESVAEMLEGTGYTT 279 (539)
T ss_dssp STTSBCBHHHHHHHTTTSSEEC
T ss_pred CCccChhHHHHHHHHHhcCCCc
Confidence 0123333467777777777754
No 24
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=97.51 E-value=0.0086 Score=60.34 Aligned_cols=209 Identities=13% Similarity=0.068 Sum_probs=138.8
Q ss_pred cCHHHHHHHHHHHHhC--CCCEEEEeccCC------CCCcccHHHHHHHHHHHHhcCcEEEEec----C------CCCHH
Q psy8190 98 LSIESVITAAQKAKSD--GATRFCMGAAWR------ELKDRDLDNIENMICEVKKIGLETCLTL----G------MLNEN 159 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~--G~~~i~l~gg~~------~~~~~~~~~~~~l~~~i~~~~~~i~~~~----g------~l~~e 159 (348)
++.++.+..++.+.+. |+..|-.+||.+ .+...+++.+.++.+.+....+...+.. | .+...
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~ 201 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFK 201 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHH
Confidence 6899999999999887 576787765522 2223455666666666654333333321 1 11357
Q ss_pred HHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeee---c-C----CCHHHHHHHHHHH
Q psy8190 160 QAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIG---L-S----ESRDQRAELIFQL 231 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~G---l-g----et~e~~~~~l~~l 231 (348)
.++...++|++.+.+..-.+ ..+....+++.+++.|..+...+.+. . . .+.+.+++.++.+
T Consensus 202 ~i~~a~~~Gvd~irIf~s~n-----------~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l 270 (718)
T 3bg3_A 202 FCEVAKENGMDVFRVFDSLN-----------YLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEEL 270 (718)
T ss_dssp HHHHHHHHTCCEEEEECSSC-----------CHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCcCEEEEEecHH-----------HHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHH
Confidence 78999999999987653111 35677888999999998877766666 2 1 2778899999999
Q ss_pred HhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCccee--
Q psy8190 232 ANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSI-- 306 (348)
Q Consensus 232 ~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~-- 306 (348)
.+.+ ++.|.+ +.|- ....+.++.+++...|..+|+..|.+-. |+ +..-....|+.+||+.+
T Consensus 271 ~~~G--a~~I~l------~DT~----G~~~P~~v~~lV~~lk~~~p~~~I~~H~--Hnd~GlAvANslaAveAGa~~VD~ 336 (718)
T 3bg3_A 271 VRAG--THILCI------KDMA----GLLKPTACTMLVSSLRDRFPDLPLHIHT--HDTSGAGVAAMLACAQAGADVVDV 336 (718)
T ss_dssp HHHT--CSEEEE------ECTT----SCCCHHHHHHHHHHHHHHSTTCCEEEEC--CCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred HHcC--CCEEEE------cCcC----CCcCHHHHHHHHHHHHHhCCCCeEEEEE--CCCccHHHHHHHHHHHhCCCEEEe
Confidence 9998 665543 3332 3467889999999999988864443322 32 22334566899999998
Q ss_pred -ee--CCeeccCCCCCchHHHHHHHHcCCCc
Q psy8190 307 -FY--GDKLLTTDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 307 -~~--~~~~~~~~g~~~~~~~~~i~~~G~~p 334 (348)
+. |+ .+.++..+++..+++..|+.+
T Consensus 337 ti~GlGe---rtGN~~lE~vv~~L~~~g~~t 364 (718)
T 3bg3_A 337 AADSMSG---MTSQPSMGALVACTRGTPLDT 364 (718)
T ss_dssp BCGGGCS---TTSCCBHHHHHHHHTTSTTCC
T ss_pred cCccccc---ccCchhHHHHHHHHHhcCCCc
Confidence 22 22 233444578888888888764
No 25
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=97.42 E-value=0.0051 Score=58.87 Aligned_cols=211 Identities=17% Similarity=0.161 Sum_probs=132.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCC------CCcccHHHHHHHHHHHHhcCcEEEEe----cCCC------CHHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRE------LKDRDLDNIENMICEVKKIGLETCLT----LGML------NENQA 161 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~------~~~~~~~~~~~l~~~i~~~~~~i~~~----~g~l------~~e~l 161 (348)
++.++.++.++.+.+.|+..|-.+++.+. ....+.+.+..+.+.+....+...+. .|.. .+..+
T Consensus 27 ~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v 106 (464)
T 2nx9_A 27 LRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFV 106 (464)
T ss_dssp CCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHH
Confidence 67888888898999999999988765210 12234444444443322222222232 1321 25678
Q ss_pred HHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeE--eeecCCCHHHHHHHHHHHHhcCCCCC
Q psy8190 162 YRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGG--IIGLSESRDQRAELIFQLANLNPYPE 239 (348)
Q Consensus 162 ~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~--i~Glget~e~~~~~l~~l~~l~~~~~ 239 (348)
+...++|++.+.+..-++ ..+...++++.+++.|..+..++ ..|...+++.+++.++.+.+.+ ++
T Consensus 107 ~~a~~~Gvd~i~if~~~s-----------d~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G--ad 173 (464)
T 2nx9_A 107 ERAVKNGMDVFRVFDAMN-----------DVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELG--VD 173 (464)
T ss_dssp HHHHHTTCCEEEECCTTC-----------CTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTT--CS
T ss_pred HHHHhCCcCEEEEEEecC-----------HHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCC--CC
Confidence 899999999888654332 12466789999999999876555 4455668999999999999998 77
Q ss_pred eeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCcceeee--CCeecc
Q psy8190 240 SVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSIFY--GDKLLT 314 (348)
Q Consensus 240 ~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~~~--~~~~~~ 314 (348)
.|.+- .|- ....|.+..+++...|..+ +..|.+- -|+ +..-....|+.+||+.+=. +..--.
T Consensus 174 ~I~l~------DT~----G~~~P~~v~~lv~~l~~~~-~~~i~~H--~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~ger 240 (464)
T 2nx9_A 174 SIALK------DMA----GILTPYAAEELVSTLKKQV-DVELHLH--CHSTAGLADMTLLKAIEAGVDRVDTAISSMSGT 240 (464)
T ss_dssp EEEEE------ETT----SCCCHHHHHHHHHHHHHHC-CSCEEEE--ECCTTSCHHHHHHHHHHTTCSEEEEBCGGGCST
T ss_pred EEEEc------CCC----CCcCHHHHHHHHHHHHHhc-CCeEEEE--ECCCCChHHHHHHHHHHhCCCEEEEeccccCCC
Confidence 65432 221 3356888999998888776 3223221 122 1123456689999998821 110002
Q ss_pred CCCCCchHHHHHHHHcCCCc
Q psy8190 315 TDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 315 ~~g~~~~~~~~~i~~~G~~p 334 (348)
+.+...+++..+++..|+.+
T Consensus 241 tGN~~lE~lv~~L~~~g~~t 260 (464)
T 2nx9_A 241 YGHPATESLVATLQGTGYDT 260 (464)
T ss_dssp TSCCBHHHHHHHHTTSTTCC
T ss_pred CcCHHHHHHHHHHHhcCCCc
Confidence 33344578888888888874
No 26
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.37 E-value=0.007 Score=52.72 Aligned_cols=205 Identities=12% Similarity=0.096 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et 178 (348)
.++..+.++.+.+.|++.+++...... ........++++.+++ .++++.++.+..+.+.++.+.++|++.+.++.+
T Consensus 32 ~~~~~~~a~~~~~~G~d~i~v~~~~~~--~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~- 108 (253)
T 1h5y_A 32 VGDPVEMAVRYEEEGADEIAILDITAA--PEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTA- 108 (253)
T ss_dssp EECHHHHHHHHHHTTCSCEEEEECCCC--TTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH-
T ss_pred cccHHHHHHHHHHcCCCEEEEEeCCcc--ccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChH-
Confidence 345666777778889998888653211 1233445677777776 478888888999999999999999999998742
Q ss_pred CHHHHhccCCCCCHHHHHHHHHHHHHcCC---eeeEeE-------eeec--C--CCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 179 SPKLYGDIISTRDYENRLNTLKNVRNVGI---NICCGG-------IIGL--S--ESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 179 ~~e~l~~i~~~~~~~~~~~~i~~~~~~G~---~i~~~~-------i~Gl--g--et~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
.+.. .+...+ .++..|. .+..+. .+-. + ++..+..+.++.+.+++ ++.+.++
T Consensus 109 ---~~~~------~~~~~~---~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G--~d~i~~~ 174 (253)
T 1h5y_A 109 ---AVRN------PQLVAL---LAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELG--AGEILLT 174 (253)
T ss_dssp ---HHHC------THHHHH---HHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHT--CSEEEEE
T ss_pred ---HhhC------cHHHHH---HHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCC--CCEEEEe
Confidence 2211 111222 2233442 222221 1111 1 11122344456667777 8888877
Q ss_pred cccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCchHHH
Q psy8190 245 NLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDS 324 (348)
Q Consensus 245 ~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~ 324 (348)
...| .||. ..++.+.+ ...+... +..+-+++|-.+. .+ ....+.+||+.++.|..+. ..+-..++..
T Consensus 175 ~~~~-~g~~----~~~~~~~i----~~l~~~~-~~pvia~GGi~~~-~~-~~~~~~~Ga~~v~vgsal~-~~~~~~~~~~ 241 (253)
T 1h5y_A 175 SIDR-DGTG----LGYDVELI----RRVADSV-RIPVIASGGAGRV-EH-FYEAAAAGADAVLAASLFH-FRVLSIAQVK 241 (253)
T ss_dssp ETTT-TTTC----SCCCHHHH----HHHHHHC-SSCEEEESCCCSH-HH-HHHHHHTTCSEEEESHHHH-TTSSCHHHHH
T ss_pred cccC-CCCc----CcCCHHHH----HHHHHhc-CCCEEEeCCCCCH-HH-HHHHHHcCCcHHHHHHHHH-cCCCCHHHHH
Confidence 6554 2332 11233222 2222223 3334444443221 22 2335678999998887553 3334578889
Q ss_pred HHHHHcCCCc
Q psy8190 325 KLLKKLGINT 334 (348)
Q Consensus 325 ~~i~~~G~~p 334 (348)
+.+++.||.+
T Consensus 242 ~~l~~~g~~~ 251 (253)
T 1h5y_A 242 RYLKERGVEV 251 (253)
T ss_dssp HHHHHTTCBC
T ss_pred HHHHHcCCCC
Confidence 9999999975
No 27
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=97.29 E-value=0.011 Score=55.82 Aligned_cols=188 Identities=14% Similarity=0.083 Sum_probs=121.6
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcC--cEEEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIG--LETCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~--~~i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
.++.++-++.++.+.+.|++.|-.+. |.. . +...+.++.+.+.+ ..+.. ......+.++...++|++.|.+
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~----P~a-s-p~d~~~~~~i~~~~~~~~v~~-~~r~~~~di~~A~~aG~~~V~i 129 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTS----PVA-S-EQSRQDCEAICKLGLKCKILT-HIRCHMDDARVAVETGVDGVDV 129 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECC----TTS-C-HHHHHHHHHHHTSCCSSEEEE-EEESCHHHHHHHHHTTCSEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEee----ccc-C-HHHHHHHHHHHhcCCCCEEEE-eeccChhhHHHHHHcCCCEEEE
Confidence 37899999999999999999987743 211 1 23445556666543 33322 1234567789999999999998
Q ss_pred cCCCCHHHHh-ccCCC--CCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCC
Q psy8190 175 NLDTSPKLYG-DIIST--RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKG 251 (348)
Q Consensus 175 g~et~~e~l~-~i~~~--~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~g 251 (348)
.+-+++-..+ .++.. ...+...+.++.+++.|+.+..+..-+...+++.+++.++.+.+.+ ++.+.+ +.
T Consensus 130 ~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~G--a~~i~l------~D 201 (423)
T 3ivs_A 130 VIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIG--VNRVGI------AD 201 (423)
T ss_dssp EEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHC--CSEEEE------EE
T ss_pred EeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhC--CCcccc------CC
Confidence 7766532222 23222 2356777889999999999887777666678899999999999998 665432 33
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCccee
Q psy8190 252 TPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSI 306 (348)
Q Consensus 252 T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~ 306 (348)
|- ...+|.++.+++...+...+ +.++..-|+ +..-....++.+||+.+
T Consensus 202 Tv----G~~~P~~v~~lv~~l~~~~~---~~i~~H~Hnd~GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 202 TV----GCATPRQVYDLIRTLRGVVS---CDIECHFHNDTGMAIANAYCALEAGATHI 252 (423)
T ss_dssp TT----SCCCHHHHHHHHHHHHHHCS---SEEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred cc----CcCCHHHHHHHHHHHHhhcC---CeEEEEECCCCchHHHHHHHHHHhCCCEE
Confidence 32 34567788888887776553 223221232 11334566899999988
No 28
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=97.03 E-value=0.062 Score=48.53 Aligned_cols=228 Identities=13% Similarity=0.079 Sum_probs=136.4
Q ss_pred ccccCHHHHHHHHHHHHhCCCCEEEEeccC--CCCCcccHHHHHHHHHHHHh-cCcEEEEecCC------CCHHHHHHHH
Q psy8190 95 TKILSIESVITAAQKAKSDGATRFCMGAAW--RELKDRDLDNIENMICEVKK-IGLETCLTLGM------LNENQAYRLK 165 (348)
Q Consensus 95 ~~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~------l~~e~l~~Lk 165 (348)
+.-.+++||.+.+..+.+.|..-+++-.=+ +.-+..+.+.+.++++.|++ .++-+.++.|- -.++.+..+.
T Consensus 26 ~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~~d~iI~~TTgg~~~~~~~~eeR~~~~~ 105 (314)
T 3lot_A 26 YLPVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQSDVVINVTTGGGGTLGIPVEERAKVVP 105 (314)
T ss_dssp TSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHCCCEEEECSSTTGGGTCCHHHHTTHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhcCCeEEEeCCCCcCCCCCCHHHHHHHHH
Confidence 334789999999999999999888775421 11124688999999999987 46666665542 2345666666
Q ss_pred HhCCCeeeccCCC-C-H--HHHhc-------------------cCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHH
Q psy8190 166 KVGLDYYNHNLDT-S-P--KLYGD-------------------IISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRD 222 (348)
Q Consensus 166 ~aG~~~i~~g~et-~-~--e~l~~-------------------i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e 222 (348)
+..-+..++++.| + . +..++ +- ..++++..+.++.+++.|++...- +| +..
T Consensus 106 ~~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~-~N~~~~i~~~~~~~~e~Gi~pE~e-~f----d~g 179 (314)
T 3lot_A 106 ALKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVF-RNTFKDLEALSRIFKENDTKPELE-CY----DIG 179 (314)
T ss_dssp HHCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEE-CCCHHHHHHHHHHHHHHTCEEEEE-EC----SHH
T ss_pred hcCCceeeecCCCcccccccccccccccccccchhhcccCCCcee-cCCHHHHHHHHHHHHHcCCEEEEE-EE----CHH
Confidence 7677777777765 2 1 11111 11 137888899999999999976544 34 233
Q ss_pred HHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CCceec-cccccccchhhHHHHH
Q psy8190 223 QRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMP--TSRIRM-SAGRKEMGETTQAFCF 299 (348)
Q Consensus 223 ~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp--~~~i~~-s~g~~~l~~~~~~~~l 299 (348)
++. .+..+.+-+. ...-.+..|+- |-+ .. .+++++.+.-++..+..+++ +....+ +.|++. -.....++
T Consensus 180 ~l~-~~~~l~~~Gl-l~~p~~~~~Vl--Gv~-~G-~~~~p~~L~~~~~~~~~l~~~~~~~Wsv~g~Gr~q--~p~~~~A~ 251 (314)
T 3lot_A 180 QIY-NTAFMFHEGY-LEPPLRLQFIH--GIL-GG-IGTAVEDVLFMKQTADRLIGRENYTWSLVGAGRFQ--MPLGTLAV 251 (314)
T ss_dssp HHH-HHHHHHHTTC-SCSSEEEEEEE--CCB-TS-CCCCHHHHHHHHHHHHHHTCGGGEEEEEEECGGGH--HHHHHHHH
T ss_pred HHH-HHHHHHHCCC-CCCCceEEEEe--cCC-CC-CCCCHHHHHHHHHHhhhccCCCCCeEEEEecChhh--HHHHHHHH
Confidence 333 3444444442 11111112221 221 11 24678888777777755565 333332 244543 24556688
Q ss_pred HhCcceeee-CCeeccCCCC---C----chHHHHHHHHcCCCchh
Q psy8190 300 LAGANSIFY-GDKLLTTDNT---K----TNDDSKLLKKLGINTRN 336 (348)
Q Consensus 300 ~~GAn~~~~-~~~~~~~~g~---~----~~~~~~~i~~~G~~p~~ 336 (348)
..|.|.-++ ++++....|. + .++..++++++|++|..
T Consensus 252 ~~GGhvRVGlEDnl~~~~G~lA~sNa~lV~~~~~i~~~lGr~vAT 296 (314)
T 3lot_A 252 IMGGDVRVGLEDSLYIERGKLAKSNAEQVEKMVRIVKELGKRPAT 296 (314)
T ss_dssp HTTCEEEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCEECC
T ss_pred HcCCceEEccCcccccCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Confidence 888886543 3333334442 1 25778899999998653
No 29
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=96.89 E-value=0.086 Score=49.16 Aligned_cols=186 Identities=13% Similarity=0.102 Sum_probs=118.2
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCc--EEEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGL--ETCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~--~i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
.++.++.++.++.+.+.|+..|-+++. .. .+...+.++.+++.+. .+.+- ..-..+.++...++|++.+.+
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p----~~--~~~~~~~~~~i~~~~~~~~v~~~-~r~~~~di~~a~~~g~~~v~i 93 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTP----VA--SPQSRKDAEVLASLGLKAKVVTH-IQCRLDAAKVAVETGVQGIDL 93 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCT----TS--CHHHHHHHHHHHTSCCSSEEEEE-EESCHHHHHHHHHTTCSEEEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCC----cC--CHHHHHHHHHHHhcCCCcEEEEE-cccChhhHHHHHHcCCCEEEE
Confidence 378999999999999999999877442 11 1344566777776433 33221 112466789999999999888
Q ss_pred cCCCCHHHHhccCCCCCH----HHHHHHHHHHHHcC--CeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccc
Q psy8190 175 NLDTSPKLYGDIISTRDY----ENRLNTLKNVRNVG--INICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ 248 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~----~~~~~~i~~~~~~G--~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P 248 (348)
..-+++-..+ .-+.+. +...++++.+++.| +.+..+..-+...+++.+.+.++.+.+. ++.+.+
T Consensus 94 ~~~~s~~~~~--~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~---a~~i~l----- 163 (382)
T 2ztj_A 94 LFGTSKYLRA--PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY---VDRVGL----- 163 (382)
T ss_dssp EECC----------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG---CSEEEE-----
T ss_pred EeccCHHHHH--HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh---cCEEEe-----
Confidence 7655543322 333444 55778889999999 8887776655566778888888777666 233322
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCceeccccccc---cchhhHHHHHHhCccee
Q psy8190 249 IKGTPLYGSSILDPLEFIRTIAVARITM-PTSRIRMSAGRKE---MGETTQAFCFLAGANSI 306 (348)
Q Consensus 249 ~~gT~l~~~~~~~~~~~~~~~a~~R~~l-p~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~ 306 (348)
+.|- ...+|.++.+++...+..+ |+..|.+- -|| +..-....|+.+||+.+
T Consensus 164 -~DT~----G~~~P~~~~~lv~~l~~~~~~~~~i~~H--~Hnd~GlAvAN~laAv~aGa~~v 218 (382)
T 2ztj_A 164 -ADTV----GVATPRQVYALVREVRRVVGPRVDIEFH--GHNDTGCAIANAYEAIEAGATHV 218 (382)
T ss_dssp -EETT----SCCCHHHHHHHHHHHHHHHTTTSEEEEE--EBCTTSCHHHHHHHHHHTTCCEE
T ss_pred -cCCC----CCCCHHHHHHHHHHHHHhcCCCCeEEEE--eCCCccHHHHHHHHHHHhCCCEE
Confidence 3331 3456888888888888765 54333321 122 22334566899999998
No 30
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=96.83 E-value=0.061 Score=47.84 Aligned_cols=157 Identities=11% Similarity=0.184 Sum_probs=97.9
Q ss_pred ceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhCCCCEEEEeccCCCCC------cccHHH
Q psy8190 61 EIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK------DRDLDN 134 (348)
Q Consensus 61 ~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~------~~~~~~ 134 (348)
+..+.+++++ |+- +|+. . .+| .+++++++.++...+.|..-|=++|..+.|. ....++
T Consensus 5 ~~~imgilN~-TpD--------SFsd---g--g~~--~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~R 68 (280)
T 1eye_A 5 PVQVMGVLNV-TDD--------SFSD---G--GCY--LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSR 68 (280)
T ss_dssp CCEEEEEEEC-SCC--------TTCS---S--CCC--CSHHHHHHHHHHHHHTTCSEEEEECC--------------HHH
T ss_pred CcEEEEEEeC-CCC--------CcCC---C--ccc--CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHH
Confidence 3456677777 543 3332 1 233 6899999999999999999998887422221 234667
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee-ccCCC-CHHHHhc----------cCC---CC---------
Q psy8190 135 IENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN-HNLDT-SPKLYGD----------IIS---TR--------- 190 (348)
Q Consensus 135 ~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~-~g~et-~~e~l~~----------i~~---~~--------- 190 (348)
+..+++.+++.++.+ +..+...+.++.-.++|.+-|+ ++-.. .+++++. ++. +.
T Consensus 69 v~pvi~~l~~~~~pi--SIDT~~~~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y 146 (280)
T 1eye_A 69 VIPVVKELAAQGITV--SIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRY 146 (280)
T ss_dssp HHHHHHHHHHTTCCE--EEECSCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCC
T ss_pred HHHHHHHhhcCCCEE--EEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcch
Confidence 778888887655554 5566777777777777777665 22222 3444431 110 00
Q ss_pred -C-----HHHHHHHHHHHHHcCCe---eeEeEeeecCCCHHHHHHHHHHHHhcC
Q psy8190 191 -D-----YENRLNTLKNVRNVGIN---ICCGGIIGLSESRDQRAELIFQLANLN 235 (348)
Q Consensus 191 -~-----~~~~~~~i~~~~~~G~~---i~~~~i~Glget~e~~~~~l~~l~~l~ 235 (348)
+ .+...+.++.+.++|++ +..+--+|++.+.++-.+.++.+..+.
T Consensus 147 ~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~ 200 (280)
T 1eye_A 147 GNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELV 200 (280)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHHhh
Confidence 1 44556778888889985 777777788778877666666666553
No 31
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=96.79 E-value=0.048 Score=47.55 Aligned_cols=182 Identities=10% Similarity=0.028 Sum_probs=97.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEE--eccCCCCCc-ccHHHHHHHHHHHH-hcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCM--GAAWRELKD-RDLDNIENMICEVK-KIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l--~gg~~~~~~-~~~~~~~~l~~~i~-~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
.+...+.++++.+.+.|++.+++ ..|.+-|.. ... .+.+.++... +..+.+++.... ....++.+.++|.+.+.
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~-~~v~~lr~~~p~~~ldvHLmv~~-p~~~i~~~~~aGAd~it 114 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGP-MVLKALRDYGITAGMDVHLMVKP-VDALIESFAKAGATSIV 114 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCH-HHHHHHHHHTCCSCEEEEEECSS-CHHHHHHHHHHTCSEEE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCH-HHHHHHHHhCCCCeEEEEEeeCC-HHHHHHHHHHcCCCEEE
Confidence 45556777777888888886654 334222211 122 2333333332 223334333322 24578899999999999
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP 253 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~ 253 (348)
+..|+.+ ...++++.++++|.++...+- ..|+-+.+ +.+.+. ++.+-++... ||..
T Consensus 115 vH~Ea~~-------------~~~~~i~~ir~~G~k~Gvaln---p~Tp~e~l---~~~l~~---vD~VlvMsV~--PGfg 170 (246)
T 3inp_A 115 FHPEASE-------------HIDRSLQLIKSFGIQAGLALN---PATGIDCL---KYVESN---IDRVLIMSVN--PGFG 170 (246)
T ss_dssp ECGGGCS-------------CHHHHHHHHHTTTSEEEEEEC---TTCCSGGG---TTTGGG---CSEEEEECSC--TTC-
T ss_pred Eccccch-------------hHHHHHHHHHHcCCeEEEEec---CCCCHHHH---HHHHhc---CCEEEEeeec--CCCC
Confidence 9887632 234667778889987755422 23332222 222222 5677666554 4532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCC----CCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 254 LYGSSILDPLEFIRTIAVARITMP----TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 254 l~~~~~~~~~~~~~~~a~~R~~lp----~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
=+...+ . .++-+...|.+.+ +..|.+.+| ++.+....+..+|||.++.|..+
T Consensus 171 GQ~fi~-~---~l~KI~~lr~~~~~~~~~~~I~VDGG---I~~~ti~~~~~aGAD~~V~GSaI 226 (246)
T 3inp_A 171 GQKFIP-A---MLDKAKEISKWISSTDRDILLEIDGG---VNPYNIAEIAVCGVNAFVAGSAI 226 (246)
T ss_dssp -CCCCT-T---HHHHHHHHHHHHHHHTSCCEEEEESS---CCTTTHHHHHTTTCCEEEESHHH
T ss_pred Ccccch-H---HHHHHHHHHHHHHhcCCCeeEEEECC---cCHHHHHHHHHcCCCEEEEehHH
Confidence 111222 2 2333334444332 344555554 22344566889999999988654
No 32
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=96.76 E-value=0.22 Score=44.83 Aligned_cols=229 Identities=13% Similarity=0.072 Sum_probs=135.9
Q ss_pred cccccCHHHHHHHHHHHHhCCCCEEEEeccC--CCCCcccHHHHHHHHHHHHh-cCcEEEEecC---CC-CHHHHHHHHH
Q psy8190 94 ATKILSIESVITAAQKAKSDGATRFCMGAAW--RELKDRDLDNIENMICEVKK-IGLETCLTLG---ML-NENQAYRLKK 166 (348)
Q Consensus 94 ~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g---~l-~~e~l~~Lk~ 166 (348)
++.-.+++||.+.+..+.+.|..-+++--=+ +.-+..+.+.+.++++.|++ .+.-+.++.| .. .++.+..+.+
T Consensus 25 P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~TTgg~~~~~~eerla~~~~ 104 (311)
T 3e49_A 25 PYLPVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDAVINLTTGGSPHMTVEERLRPATH 104 (311)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCCEEEECSCSCTTSCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEECCCCCCCCCHHHHHHHHHh
Confidence 3334789999999999999999888775421 11124688999999999997 4555555544 22 3466777777
Q ss_pred hCCCeeeccCCC-C-H-----------------HHH----hccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHH
Q psy8190 167 VGLDYYNHNLDT-S-P-----------------KLY----GDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQ 223 (348)
Q Consensus 167 aG~~~i~~g~et-~-~-----------------e~l----~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~ 223 (348)
..-+..++++.| + . ..+ +.+- ..+++...+.++.+++.|++.... +| +..+
T Consensus 105 ~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~-~n~~~~i~~~~~~~~e~Gi~pE~e-~f----d~g~ 178 (311)
T 3e49_A 105 YMPELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVF-KNTFADIEFILKTCGGNGTRFEFE-CY----DTSH 178 (311)
T ss_dssp HCCSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEE-CCCHHHHHHHHHHHHTTTCEEEEE-EC----SHHH
T ss_pred cCCCeeeecCCCcccccccchhhccccccccchhhcccCCCcee-cCCHHHHHHHHHHHHHcCCeeEEE-EE----CHHH
Confidence 677777777665 2 1 011 1111 237788899999999999977655 34 3344
Q ss_pred HHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-Ccee-ccccccccchhhHHHHHHh
Q psy8190 224 RAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPT-SRIR-MSAGRKEMGETTQAFCFLA 301 (348)
Q Consensus 224 ~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-~~i~-~s~g~~~l~~~~~~~~l~~ 301 (348)
+.. +..+.+-+. ...-.+..|+. |-+ . -.+.+++.+.-++..+...+|. .... ...|++. -.....++..
T Consensus 179 l~~-~~~l~~~Gl-~~~p~~~~~vl--Gv~-~-g~~~~~~~L~~~~~~~~~~~~~~~~wsv~~~Gr~~--~p~~~~A~~~ 250 (311)
T 3e49_A 179 LYN-LAHFVDRKL-ATPPFFVQTVF--GLL-G-GIGPHPEDLAHMRRTADRLFGADYVWSILGAGRHQ--IPLASIGAAQ 250 (311)
T ss_dssp HHH-HHHHHHTTC-SCSSEEEEEEE--SCT-T-SCCCCHHHHHHHHHHHHHHHGGGEEEEEEECGGGH--HHHHHHHHTT
T ss_pred HHH-HHHHHHcCC-CCCCeEEEEEe--cCC-C-CCCCCHHHHHHHHHHHHhhCCCCCeEEEEeeChhh--HHHHHHHHHc
Confidence 433 333444442 11111122221 222 1 1256777777777666445554 3323 2344443 2355667888
Q ss_pred Ccceeee-CCeeccCCCC---C----chHHHHHHHHcCCCchh
Q psy8190 302 GANSIFY-GDKLLTTDNT---K----TNDDSKLLKKLGINTRN 336 (348)
Q Consensus 302 GAn~~~~-~~~~~~~~g~---~----~~~~~~~i~~~G~~p~~ 336 (348)
|.|.-++ ++++....|. + .+...++++++|++|..
T Consensus 251 GGhvRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lgr~vAT 293 (311)
T 3e49_A 251 GANVRVGLEDSLWIAPGELAETNAAQVRKIRQVIEGLSLEVAS 293 (311)
T ss_dssp TCEEEECTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCCBCC
T ss_pred CCCeEEcCCcceecCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Confidence 8886543 3333334452 1 25678899999998653
No 33
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.60 E-value=0.38 Score=43.14 Aligned_cols=195 Identities=12% Similarity=0.086 Sum_probs=114.4
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHH---h-cCcEEEEecCCCCHHHHHHHHH--hCCCe
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK---K-IGLETCLTLGMLNENQAYRLKK--VGLDY 171 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~---~-~~~~i~~~~g~l~~e~l~~Lk~--aG~~~ 171 (348)
.+.+.+++.++...+.|..-+-+++|. .+ ....+.+.+++..+. + .++.+ +..+...+.++.--+ +|.+-
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~-~~-v~~~eem~rvv~~i~~~~~~~~vpi--sIDT~~~~V~eaaL~~~~Ga~i 109 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDD-GL-LDARTEMTTFLNLIMSEPEIARVPV--MIDSSKWEVIEAGLKCLQGKSI 109 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCC-TT-SCHHHHHHHHHHHHHTCHHHHTSCE--EEECSCHHHHHHHHHHCSSCCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCC-CC-CCHHHHHHHHHHHHHHhhhcCCCeE--EEeCCCHHHHHHHHHhcCCCCE
Confidence 578999999999999999998888762 22 223345555555554 2 24554 566788888887777 68876
Q ss_pred eeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEe--eecCCCHHHHHHHHHHHHhc--CCCCCeeeccccc
Q psy8190 172 YNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGI--IGLSESRDQRAELIFQLANL--NPYPESVPINNLV 247 (348)
Q Consensus 172 i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i--~Glget~e~~~~~l~~l~~l--~~~~~~i~~~~l~ 247 (348)
|+ .+.....-+.+.+.+..++++|..+..--+ -|.-+|.++..+..+.+.++ . -..++-...+
T Consensus 110 IN-----------dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~--~~Gi~~~~Ii 176 (300)
T 3k13_A 110 VN-----------SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVD--KVGFNPHDII 176 (300)
T ss_dssp EE-----------EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHH--HTCCCGGGEE
T ss_pred EE-----------eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHH--HcCCCHHHEE
Confidence 65 111111123344667888899997664434 46667777766655444433 1 0111112334
Q ss_pred ccCCC-CCCCCCC---CCHHHHHHHHHHHHHHCCCCceec-----ccc-------ccccchhhHHHHHHhCcceeeeC
Q psy8190 248 QIKGT-PLYGSSI---LDPLEFIRTIAVARITMPTSRIRM-----SAG-------RKEMGETTQAFCFLAGANSIFYG 309 (348)
Q Consensus 248 P~~gT-~l~~~~~---~~~~~~~~~~a~~R~~lp~~~i~~-----s~g-------~~~l~~~~~~~~l~~GAn~~~~~ 309 (348)
.-||. ++..... -...+.++.+...+..+|+..+-+ |-| |+.++.-+-+.++.+|.|..+..
T Consensus 177 lDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSfglp~~~~~R~~~n~~fl~~ai~~Gld~~Ivn 254 (300)
T 3k13_A 177 FDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIVN 254 (300)
T ss_dssp EECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEECcccccCCCCcchhHHHHHHHHHHHHHcCCCEEecC
Confidence 44555 3432111 114567777777776677643322 111 22333346677899999998654
No 34
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=96.52 E-value=0.16 Score=45.02 Aligned_cols=113 Identities=15% Similarity=0.121 Sum_probs=76.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHh--CCCeee-
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKV--GLDYYN- 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~a--G~~~i~- 173 (348)
.+.+.+++.++...+.|..-+-++++. +.....+.+..+++.+++. ++.+ +..+...+.++.-.++ |.+-|+
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s--~~~eE~~rv~~vi~~l~~~~~~pi--sIDT~~~~v~~aal~a~~Ga~iINd 106 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGP--TADDPVRVMEWLVKTIQEVVDLPC--CLDSTNPDAIEAGLKVHRGHAMINS 106 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCS--CSSCHHHHHHHHHHHHHHHCCCCE--EEECSCHHHHHHHHHHCCSCCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCc--CchhHHHHHHHHHHHHHHhCCCeE--EEeCCCHHHHHHHHHhCCCCCEEEE
Confidence 567999999999999999999998762 3344688999999999874 5555 5677799999988888 988776
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEe--eecCCCHHHHHHHH
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGI--IGLSESRDQRAELI 228 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i--~Glget~e~~~~~l 228 (348)
++.+ .+.+-+.+..++++|..+..--+ -|.-.|.+++.+.+
T Consensus 107 vs~~--------------~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l 149 (271)
T 2yci_X 107 TSAD--------------QWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLA 149 (271)
T ss_dssp ECSC--------------HHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHH
T ss_pred CCCC--------------ccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHH
Confidence 2221 12233445566666765443323 34444544444333
No 35
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=96.42 E-value=0.5 Score=42.51 Aligned_cols=229 Identities=11% Similarity=0.107 Sum_probs=136.1
Q ss_pred ccccCHHHHHHHHHHHHhCCCCEEEEeccC--CCCCcccHHHHHHHHHHHHh-cCcEEEEecC---CC-CHHHHHHHHHh
Q psy8190 95 TKILSIESVITAAQKAKSDGATRFCMGAAW--RELKDRDLDNIENMICEVKK-IGLETCLTLG---ML-NENQAYRLKKV 167 (348)
Q Consensus 95 ~~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g---~l-~~e~l~~Lk~a 167 (348)
+.-.+++||.+.+..+.+.|..-+++--=+ +.-+..+.+.+.++++.|++ .+.-+.++.| .. .++.+..+.+.
T Consensus 26 ~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~TTgg~~~~~~eerla~~~~~ 105 (311)
T 3e02_A 26 YLPITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTDAILNITTGGGLGMSLDERLAPARAA 105 (311)
T ss_dssp TSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCCCEEEECSSCSTTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEECCCCCCCCCHHHHHHHHHhc
Confidence 334789999999999999999888775421 11124688999999999997 4555555543 22 34677777776
Q ss_pred CCCeeeccCCC-C-H--HHHhccC---------------C---CCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHH
Q psy8190 168 GLDYYNHNLDT-S-P--KLYGDII---------------S---TRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRA 225 (348)
Q Consensus 168 G~~~i~~g~et-~-~--e~l~~i~---------------~---~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~ 225 (348)
.-+..++++.| + . ...+++. . ..+++...+.++.+++.|+..... +| +..++.
T Consensus 106 ~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e-~f----d~g~l~ 180 (311)
T 3e02_A 106 RPEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFE-CY----DVGHLY 180 (311)
T ss_dssp CCSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEE-EC----SHHHHH
T ss_pred CCCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEE-EE----cHHHHH
Confidence 77777777665 2 1 0111111 1 246778889999999999977655 34 334443
Q ss_pred HHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-Cceec-cccccccchhhHHHHHHhCc
Q psy8190 226 ELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPT-SRIRM-SAGRKEMGETTQAFCFLAGA 303 (348)
Q Consensus 226 ~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-~~i~~-s~g~~~l~~~~~~~~l~~GA 303 (348)
. +..+.+-+.-..-+. ..|+. |-+ . -.+.+++.+.-++..+...+|. ....+ ..|++. -.....++..|.
T Consensus 181 ~-~~~l~~~Gl~~~p~~-~~~vl--Gv~-~-g~~~~~~~L~~~~~~~~~~~~~~~~wsv~~~Gr~~--~p~~~~A~~~GG 252 (311)
T 3e02_A 181 N-LAHFVDRKLVEPPFF-LQCVF--GIL-G-GIGADPENLLHMRTIADRLFGQDYYLSVLAAGRHQ--MPFVTMSAILGG 252 (311)
T ss_dssp H-HHHHHHTTSSCSCEE-EEEEE--CCB-T-SCCSCHHHHHHHHHHHHHHHTTSEEEEEEECGGGH--HHHHHHHHHTTC
T ss_pred H-HHHHHHcCCCCCCeE-EEEEe--cCC-C-CCCCCHHHHHHHHHHHHhhCCCCCceEEEeeChhh--HHHHHHHHHcCC
Confidence 3 333444442011111 22221 222 1 1246788777777766455564 33332 344543 235566888888
Q ss_pred ceeee-CCeeccCCCC---C----chHHHHHHHHcCCCchh
Q psy8190 304 NSIFY-GDKLLTTDNT---K----TNDDSKLLKKLGINTRN 336 (348)
Q Consensus 304 n~~~~-~~~~~~~~g~---~----~~~~~~~i~~~G~~p~~ 336 (348)
|.-++ ++++....|. + .+...++++++|++|..
T Consensus 253 hvRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lgr~vAT 293 (311)
T 3e02_A 253 NVRVGLEDSLYSGKGQLATSNAEQVRKIRRIIEELSLDIAT 293 (311)
T ss_dssp EEEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCCBCC
T ss_pred CeEEccCcceecCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Confidence 86543 3333334452 1 25678899999998653
No 36
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=96.40 E-value=0.081 Score=47.32 Aligned_cols=136 Identities=13% Similarity=0.145 Sum_probs=79.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCC------cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCe
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELK------DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDY 171 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~------~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~ 171 (348)
.+.+.+++.+++..+.|..-|=++|..+.|. ....+++..+++.+++.++.+ +..+...+.++.--++|.+-
T Consensus 49 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpi--SIDT~~~~Va~aAl~aGa~i 126 (294)
T 2dqw_A 49 LDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPV--SVDTRKPEVAEEALKLGAHL 126 (294)
T ss_dssp ----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCE--EEECSCHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeE--EEECCCHHHHHHHHHhCCCE
Confidence 5788999999999999999998887433231 235677888888887655544 55566666666666666665
Q ss_pred ee-ccCCCCHHHHhc----------cC-C---CCC--------------HHHHHHHHHHHHHcCCe-eeEeEeeecCCCH
Q psy8190 172 YN-HNLDTSPKLYGD----------II-S---TRD--------------YENRLNTLKNVRNVGIN-ICCGGIIGLSESR 221 (348)
Q Consensus 172 i~-~g~et~~e~l~~----------i~-~---~~~--------------~~~~~~~i~~~~~~G~~-i~~~~i~Glget~ 221 (348)
|+ ++-+..+++++. ++ + +.+ .+...+.++.+.++|++ +..+--+|++.|.
T Consensus 127 INdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~ 206 (294)
T 2dqw_A 127 LNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVLDPGFGFGKLL 206 (294)
T ss_dssp EECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEEECCTTSSCCH
T ss_pred EEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEEcCCCCcccCH
Confidence 54 111122344321 11 0 111 23445567777788884 5556555777788
Q ss_pred HHHHHHHHHHHhcC
Q psy8190 222 DQRAELIFQLANLN 235 (348)
Q Consensus 222 e~~~~~l~~l~~l~ 235 (348)
++-.+.++.+..+.
T Consensus 207 ~~n~~ll~~l~~~~ 220 (294)
T 2dqw_A 207 EHNLALLRRLDEIV 220 (294)
T ss_dssp HHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 77666666665553
No 37
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.38 E-value=0.19 Score=43.60 Aligned_cols=205 Identities=16% Similarity=0.117 Sum_probs=110.3
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHH
Q psy8190 104 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKL 182 (348)
Q Consensus 104 ~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~ 182 (348)
.+.++.+.+.|++.+++.+.. ..........+.++.+++ .++++.++.|..+.+.++.+.++|++.+.++-+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~--~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~---- 106 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDIT--ASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAA---- 106 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESS--CSSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHH----
T ss_pred HHHHHHHHHcCCCEEEEECCc--hhhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHH----
Confidence 444466677899999887542 112234456677788876 4788888999999999999999999999876532
Q ss_pred HhccCCCCCHHHHHHHHHHHHH--cCCeeeEe------EeeecCC---CHHHHHHHHHHHHhcCCCCCeeecccccccCC
Q psy8190 183 YGDIISTRDYENRLNTLKNVRN--VGINICCG------GIIGLSE---SRDQRAELIFQLANLNPYPESVPINNLVQIKG 251 (348)
Q Consensus 183 l~~i~~~~~~~~~~~~i~~~~~--~G~~i~~~------~i~Glge---t~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~g 251 (348)
+.. ++...+.++.+.. ..+.+.+. .+.=.|. +..+..+.++.+.+++ ++.+.++...+. |
T Consensus 107 l~~------p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G--~~~i~~~~~~~~-g 177 (253)
T 1thf_D 107 VEN------PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRG--AGEILLTSIDRD-G 177 (253)
T ss_dssp HHC------THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTT--CSEEEEEETTTT-T
T ss_pred HhC------hHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCC--CCEEEEEeccCC-C
Confidence 221 1222333333221 11222221 1111221 1112344455566676 676665543322 2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCchHHHHHHHHcC
Q psy8190 252 TPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLG 331 (348)
Q Consensus 252 T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i~~~G 331 (348)
+. ..++.+. +...+... +..+-+++|-.+ .+.....+.+||+.++.|..+. ...-...+..+.+++.|
T Consensus 178 ~~----~g~~~~~----~~~l~~~~-~ipvia~GGI~~--~~d~~~~~~~Gadgv~vGsal~-~~~~~~~~~~~~l~~~g 245 (253)
T 1thf_D 178 TK----SGYDTEM----IRFVRPLT-TLPIIASGGAGK--MEHFLEAFLAGADAALAASVFH-FREIDVRELKEYLKKHG 245 (253)
T ss_dssp SC----SCCCHHH----HHHHGGGC-CSCEEEESCCCS--HHHHHHHHHTTCSEEEESHHHH-TTCSCHHHHHHHHHHTT
T ss_pred CC----CCCCHHH----HHHHHHhc-CCCEEEECCCCC--HHHHHHHHHcCChHHHHHHHHH-cCCCCHHHHHHHHHHcC
Confidence 22 1233322 22222222 222333443222 1223335679999998886442 22225678888899999
Q ss_pred CCch
Q psy8190 332 INTR 335 (348)
Q Consensus 332 ~~p~ 335 (348)
+.+.
T Consensus 246 ~~~~ 249 (253)
T 1thf_D 246 VNVR 249 (253)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 7543
No 38
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=96.20 E-value=0.12 Score=46.03 Aligned_cols=136 Identities=13% Similarity=0.166 Sum_probs=91.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCC------cccHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELK------DRDLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLD 170 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~------~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~ 170 (348)
.+++++++.++...+.|+.-|=++|..+.|. ....+++..+++.+++. ++.+ +..+...+.++.--++|.+
T Consensus 35 ~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~pi--SIDT~~~~va~aAl~aGa~ 112 (282)
T 1aj0_A 35 NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWI--SVDTSKPEVIRESAKVGAH 112 (282)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEE--EEECCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeE--EEeCCCHHHHHHHHHcCCC
Confidence 5789999999999999999998887433332 23456777788888764 5555 5666777777777777777
Q ss_pred eeec-cCCCCHHHHhc----------cC-C--CCC--------------HHHHHHHHHHHHHcCCe---eeEeEeeecCC
Q psy8190 171 YYNH-NLDTSPKLYGD----------II-S--TRD--------------YENRLNTLKNVRNVGIN---ICCGGIIGLSE 219 (348)
Q Consensus 171 ~i~~-g~et~~e~l~~----------i~-~--~~~--------------~~~~~~~i~~~~~~G~~---i~~~~i~Glge 219 (348)
-|+- +-+..+++++. ++ + +.+ .+...+.++.+.++|++ +..+--+|++.
T Consensus 113 iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~k 192 (282)
T 1aj0_A 113 IINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGK 192 (282)
T ss_dssp EEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSC
T ss_pred EEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCccc
Confidence 6652 22222344431 11 1 111 55666778888899995 78887778888
Q ss_pred CHHHHHHHHHHHHhcC
Q psy8190 220 SRDQRAELIFQLANLN 235 (348)
Q Consensus 220 t~e~~~~~l~~l~~l~ 235 (348)
+.++-.+.++.+..+.
T Consensus 193 ~~~~n~~ll~~l~~~~ 208 (282)
T 1aj0_A 193 NLSHNYSLLARLAEFH 208 (282)
T ss_dssp CHHHHHHHHHTGGGGG
T ss_pred CHHHHHHHHHHHHHHh
Confidence 8887777776666554
No 39
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.18 E-value=0.2 Score=43.27 Aligned_cols=181 Identities=12% Similarity=0.095 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEe--ccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCCCH-HHHHHHHHhCCCeeec
Q psy8190 99 SIESVITAAQKAKSDGATRFCMG--AAWRELKDRDLDNIENMICEVKKI-GLETCLTLGMLNE-NQAYRLKKVGLDYYNH 174 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~--gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~-e~l~~Lk~aG~~~i~~ 174 (348)
+...+.++++.+ +.|++.+++. .|.+-| ... .-..+++.+++. +..+-++....++ ..++.+.++|.+.+.+
T Consensus 11 D~~~l~~~i~~~-~~gad~lHvDvmDG~fvp-n~t--~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itv 86 (231)
T 3ctl_A 11 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVP-NLT--LSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITL 86 (231)
T ss_dssp CGGGHHHHHHHH-HTTCSCEEEEEECSSSSS-CCC--BCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEE
T ss_pred ChhhHHHHHHHH-HcCCCEEEEEEEeCccCc-cch--hcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 344556666677 7788865443 442222 111 123466677663 3333333322233 3589999999999998
Q ss_pred cCCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCC
Q psy8190 175 NLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP 253 (348)
Q Consensus 175 g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~ 253 (348)
-.|+ .+ ...++++.+++.|.++...+ ..+ |+.+.+ +.+.+ . ++.+-++...| |+.
T Consensus 87 h~Ea~~~-------------~~~~~i~~i~~~G~k~gv~l--np~-tp~~~~---~~~l~-~--~D~VlvmsV~p--Gfg 142 (231)
T 3ctl_A 87 HPETING-------------QAFRLIDEIRRHDMKVGLIL--NPE-TPVEAM---KYYIH-K--ADKITVMTVDP--GFA 142 (231)
T ss_dssp CGGGCTT-------------THHHHHHHHHHTTCEEEEEE--CTT-CCGGGG---TTTGG-G--CSEEEEESSCT--TCS
T ss_pred CcccCCc-------------cHHHHHHHHHHcCCeEEEEE--ECC-CcHHHH---HHHHh-c--CCEEEEeeecc--CcC
Confidence 7665 31 13367888899999876554 223 432222 22222 2 67777766665 332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCC----CCceeccccccccchhhHHHHHHhCcceeeeC-Ceecc
Q psy8190 254 LYGSSILDPLEFIRTIAVARITMP----TSRIRMSAGRKEMGETTQAFCFLAGANSIFYG-DKLLT 314 (348)
Q Consensus 254 l~~~~~~~~~~~~~~~a~~R~~lp----~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~-~~~~~ 314 (348)
=+.. .++. ++-+...|.+.+ +..|.+.+| +..+.......+|||.++.| ..+..
T Consensus 143 gQ~f-~~~~---l~kI~~lr~~~~~~~~~~~I~VdGG---I~~~~~~~~~~aGAd~~V~G~saif~ 201 (231)
T 3ctl_A 143 GQPF-IPEM---LDKLAELKAWREREGLEYEIEVDGS---CNQATYEKLMAAGADVFIVGTSGLFN 201 (231)
T ss_dssp SCCC-CTTH---HHHHHHHHHHHHHHTCCCEEEEESC---CSTTTHHHHHHHTCCEEEECTTTTGG
T ss_pred Cccc-cHHH---HHHHHHHHHHHhccCCCceEEEECC---cCHHHHHHHHHcCCCEEEEccHHHhC
Confidence 1111 2222 333333444332 334555554 22344556789999999999 76543
No 40
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=96.08 E-value=0.23 Score=44.74 Aligned_cols=135 Identities=17% Similarity=0.207 Sum_probs=88.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcc----------cHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDR----------DLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKK 166 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~----------~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~ 166 (348)
.+++++++.++...+.|+.-|=++|..+.|... ..+++..+++.+++. ++. ++..+...+.++.-.+
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vp--ISIDT~~~~Va~aAl~ 123 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQL--ISVDTSRPRVMREAVN 123 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSE--EEEECSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCe--EEEeCCCHHHHHHHHH
Confidence 589999999999999999988887643333211 234567777777763 444 4677888888888888
Q ss_pred hCCCeee-ccCCCCHHHHhcc----------C-C--CCC-------------HHHHHHHHHHHHHcCCe---eeEeEeee
Q psy8190 167 VGLDYYN-HNLDTSPKLYGDI----------I-S--TRD-------------YENRLNTLKNVRNVGIN---ICCGGIIG 216 (348)
Q Consensus 167 aG~~~i~-~g~et~~e~l~~i----------~-~--~~~-------------~~~~~~~i~~~~~~G~~---i~~~~i~G 216 (348)
+|.+-|+ ++-...+++++.+ + + +.+ .+...+.++.+.++|+. +..+--+|
T Consensus 124 aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G 203 (314)
T 3tr9_A 124 TGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFG 203 (314)
T ss_dssp HTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCC
T ss_pred cCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCCC
Confidence 8988765 2222234444311 1 1 111 33445677788889984 77776678
Q ss_pred ---cCCCHHHHHHHHHHHHhc
Q psy8190 217 ---LSESRDQRAELIFQLANL 234 (348)
Q Consensus 217 ---lget~e~~~~~l~~l~~l 234 (348)
++.|.++-.+.++.+..+
T Consensus 204 ~~~F~Kt~~~n~~lL~~l~~l 224 (314)
T 3tr9_A 204 QGNYGKNVSENFYLLNKLPEF 224 (314)
T ss_dssp SGGGCCCHHHHHHHHHTTHHH
T ss_pred chhhcCCHHHHHHHHHHHHHH
Confidence 888887766666555444
No 41
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=96.02 E-value=0.14 Score=44.14 Aligned_cols=181 Identities=15% Similarity=0.187 Sum_probs=98.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEE--eccCCCCC-cccHHHHHHHHHHH--HhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCM--GAAWRELK-DRDLDNIENMICEV--KKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l--~gg~~~~~-~~~~~~~~~l~~~i--~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
+...+.++++.+.+.|++.+++ ..|.+-|. ....+ +.+-++.. ....+.+++..... ...++.+.++|+|.+.
T Consensus 15 D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~-~v~~ir~~~~~~~~~dvhLmv~~p-~~~i~~~~~aGad~it 92 (228)
T 3ovp_A 15 DLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHP-VVESLRKQLGQDPFFDMHMMVSKP-EQWVKPMAVAGANQYT 92 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHH-HHHHHHHHHCSSSCEEEEEECSCG-GGGHHHHHHHTCSEEE
T ss_pred CchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHH-HHHHHHHhhCCCCcEEEEEEeCCH-HHHHHHHHHcCCCEEE
Confidence 4455666677777888886655 33422221 12333 33333333 22233344333222 3468899999999999
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP 253 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~ 253 (348)
+..|+.+ ...+.++.+++.|.++...+- ..|+.+. ++.+... ++.+-++... ||.
T Consensus 93 vH~Ea~~-------------~~~~~i~~i~~~G~k~gval~---p~t~~e~---l~~~l~~---~D~Vl~msv~--pGf- 147 (228)
T 3ovp_A 93 FHLEATE-------------NPGALIKDIRENGMKVGLAIK---PGTSVEY---LAPWANQ---IDMALVMTVE--PGF- 147 (228)
T ss_dssp EEGGGCS-------------CHHHHHHHHHHTTCEEEEEEC---TTSCGGG---TGGGGGG---CSEEEEESSC--TTT-
T ss_pred EccCCch-------------hHHHHHHHHHHcCCCEEEEEc---CCCCHHH---HHHHhcc---CCeEEEeeec--CCC-
Confidence 8776531 134567788889987644422 2333222 2222222 5666555554 443
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 254 LYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 254 l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
..+.. .+ ..++-+...|...++..|.+.+|- ..+....+..+|||.++.|..+
T Consensus 148 -~Gq~f-~~-~~l~ki~~lr~~~~~~~I~VdGGI---~~~t~~~~~~aGAd~~VvGsaI 200 (228)
T 3ovp_A 148 -GGQKF-ME-DMMPKVHWLRTQFPSLDIEVDGGV---GPDTVHKCAEAGANMIVSGSAI 200 (228)
T ss_dssp -CSCCC-CG-GGHHHHHHHHHHCTTCEEEEESSC---STTTHHHHHHHTCCEEEESHHH
T ss_pred -CCccc-CH-HHHHHHHHHHHhcCCCCEEEeCCc---CHHHHHHHHHcCCCEEEEeHHH
Confidence 22211 11 223335555666666666666543 2445566889999999988654
No 42
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=96.02 E-value=0.16 Score=54.18 Aligned_cols=208 Identities=10% Similarity=0.025 Sum_probs=131.4
Q ss_pred cCHHHHHHHHHHHHhCC--CCEEEEeccCCCC------CcccHHHHHHHHHHHHhcCcEEEEe----cCC------CCHH
Q psy8190 98 LSIESVITAAQKAKSDG--ATRFCMGAAWREL------KDRDLDNIENMICEVKKIGLETCLT----LGM------LNEN 159 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G--~~~i~l~gg~~~~------~~~~~~~~~~l~~~i~~~~~~i~~~----~g~------l~~e 159 (348)
++.++.+..++.+.+.| +..|-+.||.+.+ ...+++.+.++.+.+....+...+. .|. ...+
T Consensus 570 ~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~ 649 (1165)
T 2qf7_A 570 MRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKY 649 (1165)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHHH
Confidence 78899999999998885 5556554442211 2235566666666655422222222 121 2346
Q ss_pred HHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec------C--CCHHHHHHHHHHH
Q psy8190 160 QAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL------S--ESRDQRAELIFQL 231 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl------g--et~e~~~~~l~~l 231 (348)
.++...++|++.+.+.. + + ...+....+++.+++.|..+...+.|.. . .+.+.+++.++.+
T Consensus 650 ~i~~a~~~g~d~irif~-s-------l---~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~ 718 (1165)
T 2qf7_A 650 FVRQAAKGGIDLFRVFD-C-------L---NWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVEL 718 (1165)
T ss_dssp HHHHHHHHTCCEEEEEC-T-------T---CCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHH
T ss_pred HHHHHHhcCcCEEEEEe-e-------H---HHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHH
Confidence 78999999999977632 2 1 2345667889999999987776665541 1 4778899999999
Q ss_pred HhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCccee--
Q psy8190 232 ANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSI-- 306 (348)
Q Consensus 232 ~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~-- 306 (348)
.+.+ ++.|.+ +.|- ...+|.+..+++...|..+ +..|.+- -|+ +..-....|+.+||+.+
T Consensus 719 ~~~G--a~~i~l------~DT~----G~~~P~~~~~lv~~l~~~~-~~~i~~H--~Hnd~GlAvAn~laAv~aGa~~vd~ 783 (1165)
T 2qf7_A 719 EKAG--AHIIAV------KDMA----GLLKPAAAKVLFKALREAT-GLPIHFH--THDTSGIAAATVLAAVEAGVDAVDA 783 (1165)
T ss_dssp HHTT--CSEEEE------EETT----CCCCHHHHHHHHHHHHHHC-SSCEEEE--ECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred HHcC--CCEEEE------eCcc----CCcCHHHHHHHHHHHHHhc-CCeEEEE--ECCCCCHHHHHHHHHHHhCCCEEEe
Confidence 9998 775543 2231 3457888899998888776 3333221 122 22334566899999998
Q ss_pred -ee--CCeeccCCCCCchHHHHHHHHcCCCc
Q psy8190 307 -FY--GDKLLTTDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 307 -~~--~~~~~~~~g~~~~~~~~~i~~~G~~p 334 (348)
+. |+ .+.++..+++..+++..|+.+
T Consensus 784 ti~GlGe---~~Gn~~le~vv~~L~~~g~~t 811 (1165)
T 2qf7_A 784 AMDALSG---NTSQPCLGSIVEALSGSERDP 811 (1165)
T ss_dssp BCGGGCS---BTSCCBHHHHHHHHTTSTTCC
T ss_pred cccccCC---CccchhHHHHHHHHHhcCCCc
Confidence 22 23 133444577888888888764
No 43
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=95.93 E-value=0.12 Score=46.26 Aligned_cols=157 Identities=14% Similarity=0.184 Sum_probs=98.5
Q ss_pred ceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhCCCCEEEEeccCCCCC------cccHHH
Q psy8190 61 EIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK------DRDLDN 134 (348)
Q Consensus 61 ~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~------~~~~~~ 134 (348)
+..+.+++|+ |+- +|+. . .+| .+.+.+++.++...+.|..-|=++|..+.|. ....++
T Consensus 22 ~~~iMgilNv-TPD--------SFsd---g--g~~--~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~R 85 (294)
T 2y5s_A 22 RPLVMGILNA-TPD--------SFSD---G--GRF--LARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELAR 85 (294)
T ss_dssp SCEEEEEEEC-CC-------------------------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHH
T ss_pred CceEEEEEeC-CCC--------CCCC---C--CCc--CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHH
Confidence 3566778887 543 2332 1 133 5789999999999999999998887433231 123556
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee-ccCCCCHHHHhcc----------CC---CCC---------
Q psy8190 135 IENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN-HNLDTSPKLYGDI----------IS---TRD--------- 191 (348)
Q Consensus 135 ~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~-~g~et~~e~l~~i----------~~---~~~--------- 191 (348)
+..+++.+++.++.+ +..+...+.++.--++|.+-|+ ++-+..+++++.+ +. +.+
T Consensus 86 v~pvi~~l~~~~vpi--SIDT~~~~Va~aAl~aGa~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~ 163 (294)
T 2y5s_A 86 VIPLVEALRPLNVPL--SIDTYKPAVMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYG 163 (294)
T ss_dssp HHHHHHHHGGGCSCE--EEECCCHHHHHHHHHHTCSEEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCS
T ss_pred HHHHHHHHhhCCCeE--EEECCCHHHHHHHHHcCCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccc
Confidence 777777776555444 6778888888888888987775 2222234555421 11 011
Q ss_pred ------HHHHHHHHHHHHHcCCe---eeEeEeeecCCCH-HHHHHHHHHHHhcC
Q psy8190 192 ------YENRLNTLKNVRNVGIN---ICCGGIIGLSESR-DQRAELIFQLANLN 235 (348)
Q Consensus 192 ------~~~~~~~i~~~~~~G~~---i~~~~i~Glget~-e~~~~~l~~l~~l~ 235 (348)
.+...+.++.+.++|++ +..+--+|++.|. ++-.+.++.+.++.
T Consensus 164 dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l~ 217 (294)
T 2y5s_A 164 DVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTA 217 (294)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGGGGS
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHHHHH
Confidence 34445677788889985 7788777777777 77777776666654
No 44
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=95.91 E-value=0.49 Score=41.55 Aligned_cols=156 Identities=17% Similarity=0.244 Sum_probs=96.9
Q ss_pred ceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc------ccHHH
Q psy8190 61 EIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKD------RDLDN 134 (348)
Q Consensus 61 ~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~------~~~~~ 134 (348)
+-.+.+++|+ |+- +|+. . .+| .+++..++.++.+.+.|+.-|=++|-.+.|.. ...++
T Consensus 6 r~~iMGIlNv-TPD--------SFsD---G--G~~--~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~R 69 (270)
T 4hb7_A 6 KTKIMGILNV-TPD--------SFSD---G--GKF--NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNR 69 (270)
T ss_dssp CCEEEEEEEC-C-------------------------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHH
T ss_pred CCeEEEEEeC-CCC--------CCCC---C--CCC--CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHH
Confidence 3456677787 543 2332 1 234 57899999999999999999888775333321 23456
Q ss_pred HHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee-cc-CCCCHHHHhcc----------CC---CC--C-----H
Q psy8190 135 IENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN-HN-LDTSPKLYGDI----------IS---TR--D-----Y 192 (348)
Q Consensus 135 ~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~-~g-~et~~e~l~~i----------~~---~~--~-----~ 192 (348)
+..+++.+++.++ .++..+...+.++.--++|++-|+ ++ ...++++++.+ +. ++ + .
T Consensus 70 v~pvi~~l~~~~v--~iSIDT~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~ 147 (270)
T 4hb7_A 70 VLPVVEAIVGFDV--KISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEML 147 (270)
T ss_dssp HHHHHHHHTTSSS--EEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHH
T ss_pred HHHHHHHhhcCCC--eEEEECCCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEEeccccCCccccchhHHH
Confidence 7777788876544 457778888888888889988877 32 22256666521 11 11 1 2
Q ss_pred HHHHHHHHHHHHcCC---eeeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 193 ENRLNTLKNVRNVGI---NICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 193 ~~~~~~i~~~~~~G~---~i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
+...+.++.+.++|+ ++..+-=+|+|-|.++=++.+..+.++
T Consensus 148 ~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~~ 192 (270)
T 4hb7_A 148 TSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDEL 192 (270)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHHH
Confidence 334455778888998 366776677788888755555444443
No 45
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=95.91 E-value=0.81 Score=40.16 Aligned_cols=189 Identities=14% Similarity=0.098 Sum_probs=110.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHh--CCCeeec
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKV--GLDYYNH 174 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~a--G~~~i~~ 174 (348)
.+++.+++.++...+.|..-+-++||. ......+.+.+++..+++. ++. ++..+...+.++.-.++ |.+-|+
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~--~~v~~~ee~~rvv~~i~~~~~~p--isIDT~~~~v~~aAl~a~~Ga~iIN- 96 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGP--AVQDKVSAMEWLVEVTQEVSNLT--LCLDSTNIKAIEAGLKKCKNRAMIN- 96 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC------CHHHHHHHHHHHHHTTCCSE--EEEECSCHHHHHHHHHHCSSCEEEE-
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCC--CCCChHHHHHHHHHHHHHhCCCe--EEEeCCCHHHHHHHHhhCCCCCEEE-
Confidence 688999999999999999999998762 2233567777888877764 444 46778899999888888 987665
Q ss_pred cCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEe--eecCCCHHHHHHHH----HHHHhcCCCCCeeecccccc
Q psy8190 175 NLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGI--IGLSESRDQRAELI----FQLANLNPYPESVPINNLVQ 248 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i--~Glget~e~~~~~l----~~l~~l~~~~~~i~~~~l~P 248 (348)
.+... .+.+.+.+..++++|..+..--+ -|..+|.++..+.+ +.+.+.+ +. -..++.
T Consensus 97 ----------dvs~~--~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~G--i~---~~~Iil 159 (262)
T 1f6y_A 97 ----------STNAE--REKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFG--LP---MEDLYI 159 (262)
T ss_dssp ----------EECSC--HHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHT--CC---GGGEEE
T ss_pred ----------ECCCC--cccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CC---cccEEE
Confidence 11111 23444667778888887553323 35555666654443 3344444 21 112344
Q ss_pred cCCCC-CCCCCCCCHHHHHHHHHHHHHHC-CCCcee-----cccc---ccccchhhHHHHHHhCcceeeeC
Q psy8190 249 IKGTP-LYGSSILDPLEFIRTIAVARITM-PTSRIR-----MSAG---RKEMGETTQAFCFLAGANSIFYG 309 (348)
Q Consensus 249 ~~gT~-l~~~~~~~~~~~~~~~a~~R~~l-p~~~i~-----~s~g---~~~l~~~~~~~~l~~GAn~~~~~ 309 (348)
-||.- +. ...-...+.++.+...|..+ |+..+- .|.| +..+..-....++.+|++..+..
T Consensus 160 DPg~g~~g-~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srksfg~~~~~~l~~t~~~~a~~~g~~~~iv~ 229 (262)
T 1f6y_A 160 DPLILPAN-VAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQNCQNRPLINRTFLAMAMACGLMSAIAD 229 (262)
T ss_dssp ECCCCCTT-TCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGTTCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eCCCCcCC-CChHHHHHHHHHHHHHHHHhCCCCCEEEeecCCcCCCCHHHHHHHHHHHHHHHHhCCeEEEC
Confidence 45542 22 12223456666666666645 553322 1212 11222334556677888877654
No 46
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.89 E-value=0.76 Score=42.00 Aligned_cols=177 Identities=14% Similarity=0.113 Sum_probs=113.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccC--C--CCC--------------------cccHHHHHHHHHHHHhcCcEEEEecC
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAW--R--ELK--------------------DRDLDNIENMICEVKKIGLETCLTLG 154 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~--~--~~~--------------------~~~~~~~~~l~~~i~~~~~~i~~~~g 154 (348)
+.+...+.++.+++.|++-+-++.-. + ++. ..+.+++..+.+..++.|+.+..++
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~- 111 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL- 111 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE-
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee-
Confidence 57888888888888999998887320 0 110 1356777777777788899886555
Q ss_pred CCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 155 MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 155 ~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
.+.+.++.|.+.|++.+-++--. + +.+..++.+.+.|.++-. --|+. |.+++...++.+++-
T Consensus 112 -~d~~svd~l~~~~v~~~KI~S~~---~-----------~n~~LL~~va~~gkPviL--stGma-t~~Ei~~Ave~i~~~ 173 (349)
T 2wqp_A 112 -FSRAAALRLQRMDIPAYKIGSGE---C-----------NNYPLIKLVASFGKPIIL--STGMN-SIESIKKSVEIIREA 173 (349)
T ss_dssp -CSHHHHHHHHHHTCSCEEECGGG---T-----------TCHHHHHHHHTTCSCEEE--ECTTC-CHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHhcCCCEEEECccc---c-----------cCHHHHHHHHhcCCeEEE--ECCCC-CHHHHHHHHHHHHHc
Confidence 78888999999999988764311 1 112335555556766421 23454 999999999999988
Q ss_pred CCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCccee
Q psy8190 235 NPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSI 306 (348)
Q Consensus 235 ~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~ 306 (348)
+ .+.+-++ +|.-| |.+..+-.+..+...+..+|+..|-.| -|..+......|+.+||+-+
T Consensus 174 G--~~iiLlh------c~s~Y--p~~~~~~nL~ai~~lk~~f~~lpVg~s--dHt~G~~~~~AAvAlGA~iI 233 (349)
T 2wqp_A 174 G--VPYALLH------CTNIY--PTPYEDVRLGGMNDLSEAFPDAIIGLS--DHTLDNYACLGAVALGGSIL 233 (349)
T ss_dssp T--CCEEEEE------CCCCS--SCCGGGCCTHHHHHHHHHCTTSEEEEE--CCSSSSHHHHHHHHHTCCEE
T ss_pred C--CCEEEEe------ccCCC--CCChhhcCHHHHHHHHHHCCCCCEEeC--CCCCcHHHHHHHHHhCCCEE
Confidence 7 3222222 33222 111222245666777777765444344 36777778888999999944
No 47
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=95.87 E-value=0.87 Score=40.21 Aligned_cols=223 Identities=13% Similarity=0.118 Sum_probs=130.1
Q ss_pred ccccCHHHHHHHHHHHHhCCCCEEEEeccC-CCCCcccHHHHHHHHHHHHhc--CcEEEEecCCC---CHHHHHHHHHhC
Q psy8190 95 TKILSIESVITAAQKAKSDGATRFCMGAAW-RELKDRDLDNIENMICEVKKI--GLETCLTLGML---NENQAYRLKKVG 168 (348)
Q Consensus 95 ~~~~~~eei~~~~~~~~~~G~~~i~l~gg~-~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l---~~e~l~~Lk~aG 168 (348)
+.-.+++||.+.+..+.+.|..-+++--=+ ..-+..+.+.+.++++.|++. ++-+.++.|.. .++. ..+.+..
T Consensus 24 ~lPvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~e~R-~~~~~~~ 102 (275)
T 3no5_A 24 AVPITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNER-GAMLSLR 102 (275)
T ss_dssp TSCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGG-GTTGGGC
T ss_pred CCCCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHH-hhHhhcC
Confidence 334789999999999999999888775321 111245889999999999973 67777666522 2222 2223445
Q ss_pred CCeeeccCCC-C--HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccc
Q psy8190 169 LDYYNHNLDT-S--PKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINN 245 (348)
Q Consensus 169 ~~~i~~g~et-~--~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~ 245 (348)
-+..++++.| + +.+| ..+++...+.++.+++.|++.... +|- ..++.. +..+.+-+.-..-+.+ .
T Consensus 103 Pe~aSl~~gs~Nf~~~v~-----~N~~~~~~~~~~~~~e~Gi~pE~e-~fd----~g~l~~-~~~l~~~Gl~~~p~~~-~ 170 (275)
T 3no5_A 103 PDMASLATGSVNFPTRVY-----DNPPELVDWLAAEMKTYGIKPEVE-AFD----LSMIFQ-AAAMQAAGAIVGPLHI-Q 170 (275)
T ss_dssp CSEEEEECSCEECSSSEE-----CCCHHHHHHHHHHHHHTTCEEEEE-ESS----THHHHH-HHHHHHHTSSCSSCEE-E
T ss_pred CCEEEecCcccccccccc-----cCCHHHHHHHHHHHHHcCCeeEEE-EEc----HHHHHH-HHHHHHCCCCCCCeeE-E
Confidence 5677766665 3 2222 247888889999999999977655 442 233333 3333333320111111 2
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceec-cccccccchhhHHHHHHhCcceeee-CCeeccCCCCC----
Q psy8190 246 LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRM-SAGRKEMGETTQAFCFLAGANSIFY-GDKLLTTDNTK---- 319 (348)
Q Consensus 246 l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~-s~g~~~l~~~~~~~~l~~GAn~~~~-~~~~~~~~g~~---- 319 (348)
|+. |-+ .-.+.+++.+..++...+.+-++....+ +-|+..+ .....++..|.|.-++ ++++....|..
T Consensus 171 ~vl--Gv~--~g~~~~~~~l~~~~~~l~~~~~~~~w~v~g~Gr~~~--p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sN 244 (275)
T 3no5_A 171 FVM--GIK--NAMPVDREVLEFYVQTLKRLSPDATWTGAGIGRHQL--TMARWSLELGGHCRTGLEDNVRLDKNTLAPSN 244 (275)
T ss_dssp EEE--CCT--TSCCCCHHHHHHHHHHHHHHCTTCEEEEEECGGGHH--HHHHHHHHHTCEEEESTTTCCBSSSSCBCSCH
T ss_pred EEe--CCC--CCCCCCHHHHHHHHHHHHhCCCCCeEEEEecCHhhH--HHHHHHHHhCCCeEEcCCcceeCCCCCCCCCH
Confidence 221 221 1224677776666666544334433332 2344332 3556678888886543 34443445532
Q ss_pred ---chHHHHHHHHcCCCchh
Q psy8190 320 ---TNDDSKLLKKLGINTRN 336 (348)
Q Consensus 320 ---~~~~~~~i~~~G~~p~~ 336 (348)
.+...++++++|++|..
T Consensus 245 a~lV~~~~~i~~~~gr~vAt 264 (275)
T 3no5_A 245 AALVRQVAELCEEYGRPVAT 264 (275)
T ss_dssp HHHHHHHHHHHHHTTCCBCC
T ss_pred HHHHHHHHHHHHHcCCCCCC
Confidence 24678899999998764
No 48
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=95.79 E-value=0.95 Score=40.09 Aligned_cols=222 Identities=12% Similarity=0.135 Sum_probs=131.0
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCC-CCCcccHHHHHHHHHHHHhc--CcEEEEecCCC----CHHHHHHHHHhCC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWR-ELKDRDLDNIENMICEVKKI--GLETCLTLGML----NENQAYRLKKVGL 169 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~-~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l----~~e~l~~Lk~aG~ 169 (348)
-.+++||.+.+..+.+.|..-+++-.=+. .-...+.+.+.++++.|++. ++-+.++.|.. .++.+.-+ +..-
T Consensus 30 PvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~P 108 (282)
T 2y7e_A 30 PITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALKP 108 (282)
T ss_dssp CCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGCC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcCC
Confidence 37899999999999999988877643211 11246889999999999974 67777766532 23455555 5666
Q ss_pred CeeeccCCC-C-HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccccc
Q psy8190 170 DYYNHNLDT-S-PKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLV 247 (348)
Q Consensus 170 ~~i~~g~et-~-~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~ 247 (348)
+..++++.| + .+ .+ -..+++...+.++.+++.|+..... +| +..++.. +..+.+-+.-++.-.+..|+
T Consensus 109 e~asl~~gs~Nf~~---~v-~~n~~~~~~~~~~~~~e~Gv~pE~e-~f----d~g~l~~-~~~l~~~Gl~p~~p~~~~~V 178 (282)
T 2y7e_A 109 EMATLNAGTLNFGD---DI-FINHPADIIRLAEAFKQYNVVPEVE-VY----ESGMVDA-VARLIKKGIITQNPLHIQFV 178 (282)
T ss_dssp SEEEEECCCEEETT---EE-ECCCHHHHHHHHHHHHHTTCEEEEE-EC----SHHHHHH-HHHHHHTTSCCCSSCEEEEE
T ss_pred CEEEeccccccccc---cc-ccCCHHHHHHHHHHHHHcCCeEEEE-EE----CHHHHHH-HHHHHHcCCCCCCCeEEEEE
Confidence 888877777 4 22 11 1358899999999999999977655 34 2344333 44444444210111111122
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceec-cccccccchhhHHHHHHhCcceeee-CCeeccCCCCC------
Q psy8190 248 QIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRM-SAGRKEMGETTQAFCFLAGANSIFY-GDKLLTTDNTK------ 319 (348)
Q Consensus 248 P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~-s~g~~~l~~~~~~~~l~~GAn~~~~-~~~~~~~~g~~------ 319 (348)
- |- ..-.+.+++.+..++.....-.|+....+ +.|+..+ .....++..|.|.-++ ++++....|..
T Consensus 179 l--Gv--~~g~~~~~~~L~~~~~~lp~~~~~~~wsv~g~Gr~q~--p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sNa~ 252 (282)
T 2y7e_A 179 L--GV--PGGMSGKPKNLMYMMEHLKEEIPTATWAVAGIGRWHI--PTSLIAMVTGGHIRCGFEDNIFYHKGVIAESNAQ 252 (282)
T ss_dssp E--CC--TTSCCCCHHHHHHHHHHHHHHSTTCEEEEEECGGGHH--HHHHHHHTTTCEEEESTTTCCEEETTEECSCHHH
T ss_pred E--ec--CCCCCCCHHHHHHHHHhcccccCCCeEEEEecCcchH--HHHHHHHHcCCCeEEccccccCCCCCCCCCCHHH
Confidence 1 21 11134677777777654322122443332 2344332 3455678888886543 23333334421
Q ss_pred -chHHHHHHHHcCCCch
Q psy8190 320 -TNDDSKLLKKLGINTR 335 (348)
Q Consensus 320 -~~~~~~~i~~~G~~p~ 335 (348)
.+...++++++|++|.
T Consensus 253 lV~~~~~i~~~lgr~vA 269 (282)
T 2y7e_A 253 LVARLARIAKEIGRPLA 269 (282)
T ss_dssp HHHHHHHHHHHHTCCBC
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 2567888999999865
No 49
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.72 E-value=0.26 Score=44.07 Aligned_cols=136 Identities=18% Similarity=0.261 Sum_probs=89.5
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCC------cccHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELK------DRDLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLD 170 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~------~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~ 170 (348)
.+++.+++.++...+.|..-|-++|..+.|. ....+++..+++.+++. ++.+ +..+...+.++.-.++|.+
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpi--SIDT~~~~V~~aAl~aGa~ 137 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPI--SIDTYKAEVAKQAIEAGAH 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCE--EEECSCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceE--EEeCCCHHHHHHHHHcCCC
Confidence 5789999999999999999998887433231 12344566666777763 5555 5666788888888888888
Q ss_pred eee-ccCCC-CHHHHhcc----------C-CCC-C--------HHHHHHHHHHHHHcCCe---eeEeEeeecCCCHHHHH
Q psy8190 171 YYN-HNLDT-SPKLYGDI----------I-STR-D--------YENRLNTLKNVRNVGIN---ICCGGIIGLSESRDQRA 225 (348)
Q Consensus 171 ~i~-~g~et-~~e~l~~i----------~-~~~-~--------~~~~~~~i~~~~~~G~~---i~~~~i~Glget~e~~~ 225 (348)
-|+ ++-+. .+++++.+ + ++. . .+...+.++.+.++|++ +..+--+|++.+.++-.
T Consensus 138 iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~ 217 (297)
T 1tx2_A 138 IINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNL 217 (297)
T ss_dssp EEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHH
Confidence 775 33333 45554411 1 110 1 24455667788889985 77887778888888766
Q ss_pred HHHHHHHhcC
Q psy8190 226 ELIFQLANLN 235 (348)
Q Consensus 226 ~~l~~l~~l~ 235 (348)
+.++.+..+.
T Consensus 218 ~ll~~l~~l~ 227 (297)
T 1tx2_A 218 EAMRNLEQLN 227 (297)
T ss_dssp HHHHTGGGGG
T ss_pred HHHHHHHHHH
Confidence 7766666553
No 50
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=95.70 E-value=0.4 Score=43.31 Aligned_cols=157 Identities=17% Similarity=0.203 Sum_probs=96.0
Q ss_pred CceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc------ccHH
Q psy8190 60 NEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKD------RDLD 133 (348)
Q Consensus 60 ~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~------~~~~ 133 (348)
.+..+.+++|+ |+- +|+. . .+| .+++.+++.++.+.+.|..-|=++|..+.|.. ...+
T Consensus 8 ~~~~iMGIlNv-TPD--------SFsd---g--g~~--~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~ 71 (314)
T 2vef_A 8 AKTVICGIINV-TPD--------SFSD---G--GQF--FALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQ 71 (314)
T ss_dssp CCCEEEEEEEC-CC------------------------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHH
T ss_pred CCceEEEEEeC-CCC--------CCCC---C--CCC--CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHH
Confidence 45677888888 543 3332 1 234 57899999999999999999988874333321 3456
Q ss_pred HHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeee-ccCCC-CHHHHhc----------cCC-----CCC----
Q psy8190 134 NIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYN-HNLDT-SPKLYGD----------IIS-----TRD---- 191 (348)
Q Consensus 134 ~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~-~g~et-~~e~l~~----------i~~-----~~~---- 191 (348)
++..+++.+++. ++.+ +..+...+.++.-.++|.+-|+ ++-.. .+++++. ++. +.+
T Consensus 72 Rv~pvI~~l~~~~~vpi--SIDT~~~~Va~aAl~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~ 149 (314)
T 2vef_A 72 RVVPVIKAIRKESDVLI--SIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSL 149 (314)
T ss_dssp HHHHHHHHHHHHCCCEE--EEECSCHHHHHHHHHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEEECCHHHHCTTSTTTT
T ss_pred HHHHHHHHHHhhCCceE--EEeCCCHHHHHHHHHcCCCEEEECCCCCCChHHHHHHHHcCCCEEEEecCCCCCCCCcccc
Confidence 777777888764 5554 6677888888888888887776 33322 3444431 110 011
Q ss_pred -----------------------HHH-----HHHHHHHHHHcCC---eeeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 192 -----------------------YEN-----RLNTLKNVRNVGI---NICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 192 -----------------------~~~-----~~~~i~~~~~~G~---~i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
.++ ..+.++.+.++|+ ++..+--+|++-|.++-++.++.+.++
T Consensus 150 ~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~kt~~~nl~ll~~l~~l 223 (314)
T 2vef_A 150 IFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTKKENLLLLRDLDKL 223 (314)
T ss_dssp TSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHH
T ss_pred cccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccchHHHHHHHHHHHHh
Confidence 222 2345677888998 467776778878887766666665554
No 51
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=95.36 E-value=0.56 Score=43.44 Aligned_cols=177 Identities=14% Similarity=0.105 Sum_probs=109.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccC--C--CCC---------------------cccHHHHHHHHHHHHhcCcEEEEec
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAW--R--ELK---------------------DRDLDNIENMICEVKKIGLETCLTL 153 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~--~--~~~---------------------~~~~~~~~~l~~~i~~~~~~i~~~~ 153 (348)
+.+...+.++.+++.|++-|-++.-. + ++. ..+.+++.++.+..++.|+.+..+
T Consensus 42 sle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~st- 120 (385)
T 1vli_A 42 KLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLST- 120 (385)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECB-
T ss_pred cHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEc-
Confidence 67888888888888999998887541 1 121 123455666666666678777533
Q ss_pred CCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHh
Q psy8190 154 GMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLAN 233 (348)
Q Consensus 154 g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~ 233 (348)
..+.+.++.|.+.|++.+-++-- ++ +.+..++.+.+.|.++-. --|+. |.+++...++.+++
T Consensus 121 -pfD~~svd~l~~~~vd~~KIgS~---~~-----------~N~pLL~~va~~gKPViL--StGma-Tl~Ei~~Ave~i~~ 182 (385)
T 1vli_A 121 -VCDEGSADLLQSTSPSAFKIASY---EI-----------NHLPLLKYVARLNRPMIF--STAGA-EISDVHEAWRTIRA 182 (385)
T ss_dssp -CCSHHHHHHHHTTCCSCEEECGG---GT-----------TCHHHHHHHHTTCSCEEE--ECTTC-CHHHHHHHHHHHHT
T ss_pred -cCCHHHHHHHHhcCCCEEEECcc---cc-----------cCHHHHHHHHhcCCeEEE--ECCCC-CHHHHHHHHHHHHH
Confidence 47788888888888887776431 11 112345555556776421 23444 99999999999998
Q ss_pred cCCCCCeeec-ccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccc-hhhHHHHHHhCccee
Q psy8190 234 LNPYPESVPI-NNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMG-ETTQAFCFLAGANSI 306 (348)
Q Consensus 234 l~~~~~~i~~-~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~-~~~~~~~l~~GAn~~ 306 (348)
-+ ...+.+ ....-+| ||.. +-.+..+...+..+|+..|-.| -|..+ ......|+.+||+.+
T Consensus 183 ~G--n~~iiLlhc~s~YP-tp~~-------~~nL~aI~~Lk~~f~~lpVG~S--dHt~G~~~~~~AAvAlGA~iI 245 (385)
T 1vli_A 183 EG--NNQIAIMHCVAKYP-APPE-------YSNLSVIPMLAAAFPEAVIGFS--DHSEHPTEAPCAAVRLGAKLI 245 (385)
T ss_dssp TT--CCCEEEEEECSSSS-CCGG-------GCCTTHHHHHHHHSTTSEEEEE--ECCSSSSHHHHHHHHTTCSEE
T ss_pred CC--CCcEEEEeccCCCC-CChh-------hcCHHHHHHHHHHcCCCCEEeC--CCCCCchHHHHHHHHcCCCEE
Confidence 87 433332 2222122 1221 2234556666666765444333 36677 778888999999955
No 52
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.25 E-value=1.5 Score=38.70 Aligned_cols=192 Identities=14% Similarity=0.111 Sum_probs=112.0
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHH
Q psy8190 104 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKL 182 (348)
Q Consensus 104 ~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~ 182 (348)
.+.++.+.+.|+..+.+.+.. ..+.--.+.++.+++ .++++-..-..+++..++..+.+|+|.|.++...
T Consensus 75 ~~~A~~y~~~GA~~isvltd~-----~~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~---- 145 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQ-----RRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAA---- 145 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCG-----GGHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGG----
T ss_pred HHHHHHHHHcCCCEEEEecCh-----hhcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEeccc----
Confidence 344556677899999776531 112222344555554 4666655555678878999999999999986533
Q ss_pred HhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCH
Q psy8190 183 YGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDP 262 (348)
Q Consensus 183 l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~ 262 (348)
.+.++..+.++.+++.|+.+-..+ .|.+++. .+.+++ ++.++++.. ..+.+ .++.
T Consensus 146 -------l~~~~l~~l~~~a~~lGl~~lvev-----~t~ee~~----~A~~~G--ad~IGv~~r---~l~~~----~~dl 200 (272)
T 3qja_A 146 -------LEQSVLVSMLDRTESLGMTALVEV-----HTEQEAD----RALKAG--AKVIGVNAR---DLMTL----DVDR 200 (272)
T ss_dssp -------SCHHHHHHHHHHHHHTTCEEEEEE-----SSHHHHH----HHHHHT--CSEEEEESB---CTTTC----CBCT
T ss_pred -------CCHHHHHHHHHHHHHCCCcEEEEc-----CCHHHHH----HHHHCC--CCEEEECCC---ccccc----ccCH
Confidence 123455566788888898753321 4556543 334567 888888742 21222 1222
Q ss_pred HHHHHHHHHHHHHCCC-CceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCchHHHHHHHHcCCCchhh
Q psy8190 263 LEFIRTIAVARITMPT-SRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLGINTRNI 337 (348)
Q Consensus 263 ~~~~~~~a~~R~~lp~-~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i~~~G~~p~~~ 337 (348)
+...++ +-.+|. ..+-+.+|-.+ ++.......+||+.++.|..+... ..+.+..+.+.+.|..|..+
T Consensus 201 ~~~~~l----~~~v~~~~pvVaegGI~t--~edv~~l~~~GadgvlVGsal~~a--~dp~~~~~~l~~~~~~~~~~ 268 (272)
T 3qja_A 201 DCFARI----APGLPSSVIRIAESGVRG--TADLLAYAGAGADAVLVGEGLVTS--GDPRAAVADLVTAGTHPSCP 268 (272)
T ss_dssp THHHHH----GGGSCTTSEEEEESCCCS--HHHHHHHHHTTCSEEEECHHHHTC--SCHHHHHHHHHTTTTCSCCC
T ss_pred HHHHHH----HHhCcccCEEEEECCCCC--HHHHHHHHHcCCCEEEEcHHHhCC--CCHHHHHHHHHhhhcCCcCC
Confidence 222222 223553 22222333221 333455678999999988765332 24566777777788777654
No 53
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=95.09 E-value=1.5 Score=37.85 Aligned_cols=206 Identities=13% Similarity=0.094 Sum_probs=108.3
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCH
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSP 180 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~ 180 (348)
+..+.++.+.+.|++.+.+.+... .........++++.+++ .++++.+..|..+.+.++.+.++|++.+.++-..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~--~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~-- 107 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISA--THEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAA-- 107 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCS--STTCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH--
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCc--cccCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHH--
Confidence 334455566677999888875421 11233456677788876 4788888889999999999999999999876522
Q ss_pred HHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeE-------eee-cCC---CHHHHHHHHHHHHhcCCCCCeeeccccccc
Q psy8190 181 KLYGDIISTRDYENRLNTLKNVRNVGINICCGG-------IIG-LSE---SRDQRAELIFQLANLNPYPESVPINNLVQI 249 (348)
Q Consensus 181 e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~-------i~G-lge---t~e~~~~~l~~l~~l~~~~~~i~~~~l~P~ 249 (348)
+.. .+...+..+.....-+.+..+. .+- .|. +..+..+.+..+.+++ +..+.++... .
T Consensus 108 --l~~------p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G--~~~i~~~~~~-~ 176 (252)
T 1ka9_F 108 --VRR------PELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELG--AGEILLTSMD-R 176 (252)
T ss_dssp --HHC------THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHT--CCEEEEEETT-T
T ss_pred --HhC------cHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcC--CCEEEEeccc-C
Confidence 221 1222222332211112223222 111 121 1112334455556676 6665544322 1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCchHHHHHHHH
Q psy8190 250 KGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKK 329 (348)
Q Consensus 250 ~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i~~ 329 (348)
.|+. ..++. ..+...+... +..+-+++|-.+ .+.....+.+||+.++.|.-+ ....-...+..+.+++
T Consensus 177 ~g~~----~g~~~----~~i~~l~~~~-~ipvia~GGI~~--~~d~~~~~~~Gadgv~vgsal-~~~~~~~~~~~~~l~~ 244 (252)
T 1ka9_F 177 DGTK----EGYDL----RLTRMVAEAV-GVPVIASGGAGR--MEHFLEAFQAGAEAALAASVF-HFGEIPIPKLKRYLAE 244 (252)
T ss_dssp TTTC----SCCCH----HHHHHHHHHC-SSCEEEESCCCS--HHHHHHHHHTTCSEEEESHHH-HTTSSCHHHHHHHHHH
T ss_pred CCCc----CCCCH----HHHHHHHHHc-CCCEEEeCCCCC--HHHHHHHHHCCCHHHHHHHHH-HcCCCCHHHHHHHHHH
Confidence 2322 12232 2333333333 222333333222 122233457899999887644 2222256778888888
Q ss_pred cCCCc
Q psy8190 330 LGINT 334 (348)
Q Consensus 330 ~G~~p 334 (348)
.|..+
T Consensus 245 ~~~~~ 249 (252)
T 1ka9_F 245 KGVHV 249 (252)
T ss_dssp TTCCB
T ss_pred CCCCc
Confidence 88754
No 54
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=95.07 E-value=0.22 Score=45.02 Aligned_cols=157 Identities=15% Similarity=0.126 Sum_probs=86.9
Q ss_pred CceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhCCCCEEEEeccCCCCC-----cccHHH
Q psy8190 60 NEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELK-----DRDLDN 134 (348)
Q Consensus 60 ~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~-----~~~~~~ 134 (348)
++..+.+++|+ |+- +|+. . .+| .+.+.+++.++++.+.|..-|=++|..+.|. ....++
T Consensus 40 ~~~~vMGIlNv-TPD--------SFsd---g--g~~--~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~R 103 (318)
T 2vp8_A 40 DRALIMAIVNR-TPD--------SFYD---K--GAT--FSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITR 103 (318)
T ss_dssp SSCEEEEEEC------------------------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHH
T ss_pred CCcEEEEEEeC-CCC--------cccC---C--Ccc--CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHH
Confidence 44566777777 432 2332 1 233 5789999999999999999988876422221 123445
Q ss_pred HHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeee-ccCCCCHHHHhc----------cCC----CCC------
Q psy8190 135 IENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYN-HNLDTSPKLYGD----------IIS----TRD------ 191 (348)
Q Consensus 135 ~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~-~g~et~~e~l~~----------i~~----~~~------ 191 (348)
+..+++.+++. ++.+ +..+...+.++.--++|.+-|+ ++-+..+++++. ++. ..+
T Consensus 104 v~pvI~~l~~~~~~vpI--SIDT~~~~VaeaAl~aGa~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~ 181 (318)
T 2vp8_A 104 LVPFIEWLRGAYPDQLI--SVDTWRAQVAKAACAAGADLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVS 181 (318)
T ss_dssp HHHHHHHHHHHSTTCEE--EEECSCHHHHHHHHHHTCCEEEETTSSSSTTHHHHHHHHTCEEEEECC-------------
T ss_pred HHHHHHHHHhhCCCCeE--EEeCCCHHHHHHHHHhCCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccccc
Confidence 66667777764 5554 6777888888888888887665 222223444431 111 111
Q ss_pred H------------HHHHHHHHHHHHcCCe---eeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 192 Y------------ENRLNTLKNVRNVGIN---ICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 192 ~------------~~~~~~i~~~~~~G~~---i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
| +...+.++.+.++|+. +..+--+|++.+.++-.+.++.+.++
T Consensus 182 y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~l 239 (318)
T 2vp8_A 182 YGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADL 239 (318)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHHH
Confidence 1 3334557777788884 77776677766666656665555544
No 55
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=94.97 E-value=1.3 Score=38.39 Aligned_cols=130 Identities=18% Similarity=0.080 Sum_probs=94.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEec--------CCCCHHHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTL--------GMLNENQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~--------g~l~~e~l~~Lk~aG~ 169 (348)
+++..+.+.++.+..+ ++.+-|++|. ....+.+.+.+.++..++.++.++.-. -..-++.++..++.|+
T Consensus 23 lg~~~~~d~Le~~g~y-ID~lKfg~Gt--~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf 99 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGDY-IDFVKFGWGT--SAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGF 99 (251)
T ss_dssp CCHHHHHHHHHHHGGG-CSEEEECTTG--GGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCce--eeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCC
Confidence 5676666665544333 8888998883 234566789999999999888886311 1245678999999999
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-------CCCHHHHHHHHHHHHhcCCCCCeee
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-------SESRDQRAELIFQLANLNPYPESVP 242 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-------get~e~~~~~l~~l~~l~~~~~~i~ 242 (348)
+.|.++-.|. .-+.+++.+.++.+++.|+.+-+.+ |- -.+++++++.++.-.+.+ .+.|-
T Consensus 100 ~~iEiS~G~i---------~l~~~~~~~~I~~~~~~G~~v~~Ev--G~k~~~~~~~~~~~~~I~~~~~~LeAG--A~~Vi 166 (251)
T 1qwg_A 100 EAVEISDGSS---------DISLEERNNAIKRAKDNGFMVLTEV--GKKMPDKDKQLTIDDRIKLINFDLDAG--ADYVI 166 (251)
T ss_dssp CEEEECCSSS---------CCCHHHHHHHHHHHHHTTCEEEEEE--CCSSHHHHTTCCHHHHHHHHHHHHHHT--CSEEE
T ss_pred CEEEECCCcc---------cCCHHHHHHHHHHHHHCCCEEeeec--cccCCcccCCCCHHHHHHHHHHHHHCC--CcEEE
Confidence 9999876652 2478899999999999999875442 33 247788999888877777 66654
Q ss_pred c
Q psy8190 243 I 243 (348)
Q Consensus 243 ~ 243 (348)
+
T Consensus 167 i 167 (251)
T 1qwg_A 167 I 167 (251)
T ss_dssp E
T ss_pred E
Confidence 4
No 56
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=94.92 E-value=0.19 Score=43.21 Aligned_cols=194 Identities=13% Similarity=0.082 Sum_probs=101.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEe--ccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCCC-HHHHHHHHHhCCCeeec
Q psy8190 99 SIESVITAAQKAKSDGATRFCMG--AAWRELKDRDLDNIENMICEVKKI-GLETCLTLGMLN-ENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~--gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~-~e~l~~Lk~aG~~~i~~ 174 (348)
+...+.++++.+.+.|++.+++. +|..-| .. ..-.++++.+++. +..+.++.-..+ +..++.+.++|+|.+.+
T Consensus 15 D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp-~~--~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~v 91 (230)
T 1tqj_A 15 DFSRLGEEIKAVDEAGADWIHVDVMDGRFVP-NI--TIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISV 91 (230)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSS-CB--CBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEE
T ss_pred CHhHHHHHHHHHHHcCCCEEEEEEEecCCCc-ch--hhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEE
Confidence 34556666677778899876553 342212 11 1223777777763 334333322222 34689999999999998
Q ss_pred cCC--CCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCC
Q psy8190 175 NLD--TSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGT 252 (348)
Q Consensus 175 g~e--t~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT 252 (348)
..| +.+ ...+.++.+++.|+.+...+ .. .|+.+.. +.+.+ + .+.+.+....|.-|.
T Consensus 92 h~e~~~~~-------------~~~~~~~~i~~~g~~~gv~~--~p-~t~~e~~---~~~~~-~--~D~v~~msv~pg~gg 149 (230)
T 1tqj_A 92 HVEHNASP-------------HLHRTLCQIRELGKKAGAVL--NP-STPLDFL---EYVLP-V--CDLILIMSVNPGFGG 149 (230)
T ss_dssp ECSTTTCT-------------THHHHHHHHHHTTCEEEEEE--CT-TCCGGGG---TTTGG-G--CSEEEEESSCC----
T ss_pred Ccccccch-------------hHHHHHHHHHHcCCcEEEEE--eC-CCcHHHH---HHHHh-c--CCEEEEEEeccccCC
Confidence 887 421 23356777888888765443 22 3443332 22222 2 677777777654332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCC----CCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCchHHHHHHH
Q psy8190 253 PLYGSSILDPLEFIRTIAVARITMP----TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLK 328 (348)
Q Consensus 253 ~l~~~~~~~~~~~~~~~a~~R~~lp----~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i~ 328 (348)
....+ . .++.+...|.+.+ +..|.+-+|- ..+.......+|||.++.|..+... ..+.+..+.++
T Consensus 150 --q~~~~-~---~~~~i~~lr~~~~~~~~~~~I~v~GGI---~~~~~~~~~~aGad~vvvGSai~~a--~d~~~~~~~l~ 218 (230)
T 1tqj_A 150 --QSFIP-E---VLPKIRALRQMCDERGLDPWIEVDGGL---KPNNTWQVLEAGANAIVAGSAVFNA--PNYAEAIAGVR 218 (230)
T ss_dssp --CCCCG-G---GHHHHHHHHHHHHHHTCCCEEEEESSC---CTTTTHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHH
T ss_pred --ccCcH-H---HHHHHHHHHHHHHhcCCCCcEEEECCc---CHHHHHHHHHcCCCEEEECHHHHCC--CCHHHHHHHHH
Confidence 22222 2 2233333333332 3334444432 1233344678999999888655432 22444444444
No 57
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=94.86 E-value=1.9 Score=38.12 Aligned_cols=219 Identities=12% Similarity=0.068 Sum_probs=130.5
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCC-CCCcccHHHHHHHHHHHHhc--CcEEEEecCCC---CHHHHHHHHHhCCC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWR-ELKDRDLDNIENMICEVKKI--GLETCLTLGML---NENQAYRLKKVGLD 170 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~-~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l---~~e~l~~Lk~aG~~ 170 (348)
-.+++||.+.+.++.+.|..-+++-.=+. .-...+.+.+.++++.|++. ++-+.++.|.. .++.+.-+ +..-+
T Consensus 30 PvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~Pe 108 (284)
T 3chv_A 30 PITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKPD 108 (284)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCCC
Confidence 37899999999999999999887754211 11246889999999999973 67777765422 23444444 45667
Q ss_pred eeeccCCC-C-HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCC--CCCeeecccc
Q psy8190 171 YYNHNLDT-S-PKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNP--YPESVPINNL 246 (348)
Q Consensus 171 ~i~~g~et-~-~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~--~~~~i~~~~l 246 (348)
..++++.| + . +.+ -..+++...+.++.+++.|+..... +| +..++.. +..+.+-+. .+..+.+..=
T Consensus 109 ~aSl~~Gs~Nf~---~~v-~~n~~~~~~~~~~~~~e~Gv~pE~e-~f----d~g~l~~-~~~l~~~Gll~~p~~~~~vlG 178 (284)
T 3chv_A 109 MASLSVGSNNFP---SRV-YENPPDLVDWLAAQMRSYRVTPEIE-AF----DLSHILR-AIDMHGRGLLYGKLYVQFVMG 178 (284)
T ss_dssp EEEECCSCEECS---SSE-ECCCHHHHHHHHHHHHHHTCEEEEE-ES----SHHHHHH-HHHHHHTTCSCSSCEEEEEEC
T ss_pred EEEecCcccccC---Ccc-ccCCHHHHHHHHHHHHHcCCEEEEE-EE----CHHHHHH-HHHHHHcCCCCCCceEEEEEe
Confidence 77777776 3 2 111 1247888999999999999977655 33 2333333 344444442 1222222211
Q ss_pred cccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceec-cccccccchhhHHHHHHhCcceeee-CCeeccCCCCC-----
Q psy8190 247 VQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRM-SAGRKEMGETTQAFCFLAGANSIFY-GDKLLTTDNTK----- 319 (348)
Q Consensus 247 ~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~-s~g~~~l~~~~~~~~l~~GAn~~~~-~~~~~~~~g~~----- 319 (348)
.+| -.+.+++.+..++.....-.|.....+ +.|+..+ .....++..|.|.-++ ++++....|..
T Consensus 179 --v~~-----g~~~~~~~L~~~~~~~p~~~~~~~ws~~g~Gr~q~--p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sNa 249 (284)
T 3chv_A 179 --VKN-----AMPADREVFDFYVRMMRTRAPQAEWCAAGIGANQL--TVNEWAIAAGGHTRTGLEDNIRLDRQTLAPSNA 249 (284)
T ss_dssp --CTT-----SCCCCHHHHHHHHHHHHHHCTTSEEEEEECTTHHH--HHHHHHHHTTCEEEESTTTCCBSSSSCBCCCHH
T ss_pred --cCC-----CCCCCHHHHHHHHHhccCCCCCceEEEEecCcchh--HHHHHHHHcCCCeEEecccccCCCCCCCCCCHH
Confidence 121 135677777777655422111133322 2334332 3455688889886543 34443445532
Q ss_pred --chHHHHHHHHcCCCch
Q psy8190 320 --TNDDSKLLKKLGINTR 335 (348)
Q Consensus 320 --~~~~~~~i~~~G~~p~ 335 (348)
.+...++++++|++|.
T Consensus 250 ~lV~~~~~i~~~lgr~vA 267 (284)
T 3chv_A 250 ALVRRSVELCDKYQRPVA 267 (284)
T ss_dssp HHHHHHHHHHHHTTCCBC
T ss_pred HHHHHHHHHHHHcCCCCC
Confidence 2466888999999865
No 58
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=94.85 E-value=2.1 Score=38.46 Aligned_cols=224 Identities=15% Similarity=0.136 Sum_probs=130.8
Q ss_pred cccccCHHHHHHHHHHHHhCCCCEEEEeccC--CCCCcccHHHHHHHHHHHHhc--CcEEEEecC------C--------
Q psy8190 94 ATKILSIESVITAAQKAKSDGATRFCMGAAW--RELKDRDLDNIENMICEVKKI--GLETCLTLG------M-------- 155 (348)
Q Consensus 94 ~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g------~-------- 155 (348)
++.-.+++||.+.+.++.+.|..-+++-.=+ +.-...+.+.+.++++.|++. ++-+.++.| .
T Consensus 41 P~lPvTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~~~~d~ii~~TTg~gg~~~g~~~~p~~~ 120 (316)
T 3c6c_A 41 PSMPITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKA 120 (316)
T ss_dssp TTCCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCccccccCcccCcccc
Confidence 3334789999999999999999988775421 111346889999999999974 666666655 1
Q ss_pred -------CCHHHHHHHHHhCCCeeeccCCC-CH--HHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHH
Q psy8190 156 -------LNENQAYRLKKVGLDYYNHNLDT-SP--KLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRA 225 (348)
Q Consensus 156 -------l~~e~l~~Lk~aG~~~i~~g~et-~~--e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~ 225 (348)
-.++.+.-+.+..-+..++++.| +- ..-+.+ -..+++...+..+.+++.|++.... +| +..++.
T Consensus 121 ~~~~~l~~~eeR~~~~~~~~Pe~aSl~~Gs~Nf~~~~~~~v-~~n~~~~i~~~~~~~~e~Gv~pE~e-~f----d~g~l~ 194 (316)
T 3c6c_A 121 LPESDVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFV-YLNTTRTLRAMARRFQELGIKPELE-VF----SPGDIL 194 (316)
T ss_dssp CTTCEECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEE-ECCCHHHHHHHHHHHHHHTCEEEEE-ES----SHHHHH
T ss_pred ccccccCCHHHHHHHHHhcCCCeEEeccccccccCCCCcee-ecCCHHHHHHHHHHHHHcCCeEEEE-EE----CHHHHH
Confidence 23456666666677888887776 31 100111 1358889999999999999977655 33 234433
Q ss_pred HHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-Ccee-ccccccccchhhHHHHHHhCc
Q psy8190 226 ELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPT-SRIR-MSAGRKEMGETTQAFCFLAGA 303 (348)
Q Consensus 226 ~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-~~i~-~s~g~~~l~~~~~~~~l~~GA 303 (348)
. +..+.+-+. .+.-.+..|+- |-+. -.+.+++.+..++.. +|. .... .+.|+..+ .....++..|.
T Consensus 195 ~-~~~l~~~Gl-l~~p~~~~~vl--Gv~~--g~p~~p~~L~~~~~~----lp~~~~wsv~g~Gr~q~--p~~~~A~~~GG 262 (316)
T 3c6c_A 195 F-GKQLIEEGL-IDGVPLFQMVL--GVLW--GAPASTETMIYQRNL----IPANAQWAAFGIGRDQM--PMMAQAALLGG 262 (316)
T ss_dssp H-HHHHHHTTC-SCSSCEEEEEC--SCTT--SCCSCHHHHHHHHTT----SCTTSEEEEECCGGGHH--HHHHHHHHHTC
T ss_pred H-HHHHHHcCC-CCCCceEEEEE--ecCC--CCCCCHHHHHHHHHh----cCCCCeEEEEecCcchH--HHHHHHHHcCC
Confidence 3 444444442 11111111211 2111 123566666655432 554 3322 23444332 34555788888
Q ss_pred ceeee-CCeeccCCCC---C---chHHHHHHHHcCCCch
Q psy8190 304 NSIFY-GDKLLTTDNT---K---TNDDSKLLKKLGINTR 335 (348)
Q Consensus 304 n~~~~-~~~~~~~~g~---~---~~~~~~~i~~~G~~p~ 335 (348)
|.-++ ++++....|. . .+...++++++|++|.
T Consensus 263 hvRVGlEDnl~~~~G~~AsNa~lV~~a~~i~~~lGr~vA 301 (316)
T 3c6c_A 263 NVRVGLEDNLYLSRGVFATNGQLVERARTVIEHLGMSVA 301 (316)
T ss_dssp BEEESTTTCCEEETTEECCHHHHHHHHHHHHHHTTCEEC
T ss_pred CeEEccccccCCCCCcCCCHHHHHHHHHHHHHHcCCCCC
Confidence 86543 2333223332 1 2567888999999865
No 59
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=94.75 E-value=0.51 Score=46.65 Aligned_cols=224 Identities=12% Similarity=0.038 Sum_probs=125.0
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHH-hcCcEEEEecCCCC---HHHHHHHHHhCCCee
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK-KIGLETCLTLGMLN---ENQAYRLKKVGLDYY 172 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~-~~~~~i~~~~g~l~---~e~l~~Lk~aG~~~i 172 (348)
.++.++-++.++.+.+.|++.|-.+.. ..+..+.+.+..+.+... ..+..+++-.-... +..++.++.+|.++|
T Consensus 89 ~~s~eeKl~Ia~~L~~lGVd~IEaGfP--~asp~D~e~v~~i~~~~l~~~~~~i~aL~r~~~~did~a~eal~~a~~~~V 166 (644)
T 3hq1_A 89 PMSPARKRRMFDLLVRMGYKEIEVGFP--SASQTDFDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGAPRAIV 166 (644)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECT--TTCHHHHHHHHHHHHTTCSCTTCEEEEEEESCHHHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCC--CCChhHHHHHHHHHhcCCCCCCeEEEEEecCCHhhHHHHHHHHhcCCCCEE
Confidence 378999999999999999999866432 112223333333333211 01445543211111 233556677888889
Q ss_pred eccCCCCHHHHhccCCCCCHHHHHH----HHHHHHHcCC---eeeEeEeeec----CCCHHHHHHHHHHHHhcCC-CCCe
Q psy8190 173 NHNLDTSPKLYGDIISTRDYENRLN----TLKNVRNVGI---NICCGGIIGL----SESRDQRAELIFQLANLNP-YPES 240 (348)
Q Consensus 173 ~~g~et~~e~l~~i~~~~~~~~~~~----~i~~~~~~G~---~i~~~~i~Gl----get~e~~~~~l~~l~~l~~-~~~~ 240 (348)
.+.+-+++-..+. .-+.+.++.++ .++.+++.+- .+..++.|+. .-+++.+++.++.+.+.+. +++.
T Consensus 167 hif~stSd~h~~~-~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~eaG~~Gad~ 245 (644)
T 3hq1_A 167 HFYNSTSILQRRV-VFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPER 245 (644)
T ss_dssp EEEEECCHHHHHH-TTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHHHHCCCSSS
T ss_pred EEEecCCHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHHhcCCCCCc
Confidence 8877776443332 22445665554 4455555542 2233444544 1356777788888777531 1331
Q ss_pred -eecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-ceeccccccc---cchhhHHHHHHhCcceee---e--CC
Q psy8190 241 -VPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTS-RIRMSAGRKE---MGETTQAFCFLAGANSIF---Y--GD 310 (348)
Q Consensus 241 -i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~-~i~~s~g~~~---l~~~~~~~~l~~GAn~~~---~--~~ 310 (348)
+.++ .|.|- ...++.++.+++...+..+|+. .+.++..-|| +..-....|+.+||+.+= . |+
T Consensus 246 ~~~I~----LpDTv----G~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vdgti~G~GE 317 (644)
T 3hq1_A 246 PIIFN----LPATV----EMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCLFGNGE 317 (644)
T ss_dssp CEEEE----EEESS----CCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS
T ss_pred eeEEE----ecCCC----cccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEEecCCCCCc
Confidence 1111 23342 3467888889998888888862 3444432233 223345668999999982 1 22
Q ss_pred eeccCCCCCchHHHHHHHHcCCCc
Q psy8190 311 KLLTTDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 311 ~~~~~~g~~~~~~~~~i~~~G~~p 334 (348)
.+.+...+++.-.+...|+.+
T Consensus 318 ---RaGNa~LE~lv~~L~~~Gi~t 338 (644)
T 3hq1_A 318 ---RTGNVCLVTLGLNLFSRGVDP 338 (644)
T ss_dssp ---TTCBCBHHHHHHHHHTTTCCC
T ss_pred ---cccCccHHHHHHHHHhcccCC
Confidence 122333466666677777764
No 60
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=94.55 E-value=0.22 Score=42.49 Aligned_cols=138 Identities=11% Similarity=0.149 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEe--cCCC---C-HHHHHHHHHhCCCee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLT--LGML---N-ENQAYRLKKVGLDYY 172 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~--~g~l---~-~e~l~~Lk~aG~~~i 172 (348)
..+.+.+.++.+++.|+..|.|+--. .....+.+.+.++++... +++++.+ .... + .+.++.|.+.|++||
T Consensus 74 E~~~M~~Di~~~~~~GadGvV~G~Lt-~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rI 150 (224)
T 2bdq_A 74 ELRIMEEDILRAVELESDALVLGILT-SNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRI 150 (224)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBC-TTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeEC-CCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHcCCCEE
Confidence 45777788888999999999996542 223478889999988776 4555554 2222 2 466899999999998
Q ss_pred ec-cCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccC
Q psy8190 173 NH-NLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIK 250 (348)
Q Consensus 173 ~~-g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~ 250 (348)
.- |-+.+ .+..+-++.++.+.+ ++- ...+|.|-|=+.+.+.+. +...+ +..+..+.++-.+
T Consensus 151 LTSG~~~~----------~~a~~g~~~L~~Lv~~a~~--ri~Im~GgGV~~~Ni~~l---~~~tG--v~e~H~s~i~~~~ 213 (224)
T 2bdq_A 151 LLHGSSNG----------EPIIENIKHIKALVEYANN--RIEIMVGGGVTAENYQYI---CQETG--VKQAHGTRITQMA 213 (224)
T ss_dssp EECSCSSC----------CCGGGGHHHHHHHHHHHTT--SSEEEECSSCCTTTHHHH---HHHHT--CCEEEETTCC---
T ss_pred ECCCCCCC----------CcHHHHHHHHHHHHHhhCC--CeEEEeCCCCCHHHHHHH---HHhhC--CCEEccccccCCC
Confidence 73 22211 112222333333322 222 245677766555554443 23456 6777778888889
Q ss_pred CCCCCC
Q psy8190 251 GTPLYG 256 (348)
Q Consensus 251 gT~l~~ 256 (348)
|+|++.
T Consensus 214 ~~~~~~ 219 (224)
T 2bdq_A 214 GDPLEH 219 (224)
T ss_dssp ------
T ss_pred CCcchh
Confidence 999864
No 61
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=94.47 E-value=0.78 Score=39.21 Aligned_cols=182 Identities=16% Similarity=0.174 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEe--ccCCCCCcccHHHHHHHHHHHHhc-CcEEE--EecCCCCHHHHHHHHHhCCCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMG--AAWRELKDRDLDNIENMICEVKKI-GLETC--LTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~--gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~--~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
+...+.+.++.+.+.|++.+.+. .|.+-+. . ..-.+.++.+++. ...+. +-... +.+.++.+.++|+|.+.
T Consensus 17 d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~-~--~~~~~~~~~lr~~~~~~~~v~lmv~d-~~~~i~~~~~agad~v~ 92 (228)
T 1h1y_A 17 DFANLAAEADRMVRLGADWLHMDIMDGHFVPN-L--TIGAPVIQSLRKHTKAYLDCHLMVTN-PSDYVEPLAKAGASGFT 92 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC-B--CBCHHHHHHHHTTCCSEEEEEEESSC-GGGGHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEecCCcCcc-h--hhCHHHHHHHHhhcCCcEEEEEEecC-HHHHHHHHHHcCCCEEE
Confidence 34556666677778899887554 3322121 1 1123666666653 22322 22221 24468889999999998
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhc--CCCCCeeecccccccCC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANL--NPYPESVPINNLVQIKG 251 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l--~~~~~~i~~~~l~P~~g 251 (348)
+..+..++. +.+.++.+++.|+.+... +. ..|+.+. +..+... + ++.+.+....|..+
T Consensus 93 vH~~~~~~~------------~~~~~~~i~~~g~~igv~--~~-p~t~~e~---~~~~~~~~~~--~d~vl~~sv~pg~~ 152 (228)
T 1h1y_A 93 FHIEVSRDN------------WQELIQSIKAKGMRPGVS--LR-PGTPVEE---VFPLVEAENP--VELVLVMTVEPGFG 152 (228)
T ss_dssp EEGGGCTTT------------HHHHHHHHHHTTCEEEEE--EC-TTSCGGG---GHHHHHSSSC--CSEEEEESSCTTCS
T ss_pred ECCCCcccH------------HHHHHHHHHHcCCCEEEE--Ee-CCCCHHH---HHHHHhcCCC--CCEEEEEeecCCCC
Confidence 655442111 135567777888776522 22 2343332 2333343 4 67887777665322
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 252 TPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 252 T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
. .... ...++.+...|...++..+.+.+|- +.+.......+|||.++.|..+.
T Consensus 153 g--~~~~----~~~l~~i~~~~~~~~~~pi~v~GGI---~~~ni~~~~~aGaD~vvvGsai~ 205 (228)
T 1h1y_A 153 G--QKFM----PEMMEKVRALRKKYPSLDIEVDGGL---GPSTIDVAASAGANCIVAGSSIF 205 (228)
T ss_dssp S--CCCC----GGGHHHHHHHHHHCTTSEEEEESSC---STTTHHHHHHHTCCEEEESHHHH
T ss_pred c--ccCC----HHHHHHHHHHHHhcCCCCEEEECCc---CHHHHHHHHHcCCCEEEECHHHH
Confidence 1 1111 1233445556666655445555542 22334456778999998886553
No 62
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=94.45 E-value=0.73 Score=41.68 Aligned_cols=198 Identities=9% Similarity=0.033 Sum_probs=110.1
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCC--------cccHHHHHHHHHHHHhcCcEEEE--ecCCCCHHHHHHH---
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELK--------DRDLDNIENMICEVKKIGLETCL--TLGMLNENQAYRL--- 164 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~--------~~~~~~~~~l~~~i~~~~~~i~~--~~g~l~~e~l~~L--- 164 (348)
++.++.++.++.+.+.|+..|=++... +|. ..+.+.+..+-+ + .+..+.+ .......+.++.+
T Consensus 21 ~~~~~k~~ia~~L~~aGv~~IEvg~~~-~p~~~f~~~~~~~~~e~l~~i~~-~--~~~~~~~L~r~~~~~~~dv~~~~~a 96 (320)
T 3dxi_A 21 FNSKIVDAYILAMNELPIDYLEVGYRN-KPSKEYMGKFGYTPVSVLKHLRN-I--STKKIAIMLNEKNTTPEDLNHLLLP 96 (320)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEEECC-SCCSSCCCHHHHCCHHHHHHHHH-H--CCSEEEEEEEGGGCCGGGHHHHHGG
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeccc-CCccccccccccChHHHHHHHhh-c--cCCeEEEEecCCCCChhhHHHHHHh
Confidence 789999999999999999998665321 111 012333333322 2 3444432 2222223344444
Q ss_pred HHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCC-CHHHHHHHHHHHHhcCCCCCeeec
Q psy8190 165 KKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSE-SRDQRAELIFQLANLNPYPESVPI 243 (348)
Q Consensus 165 k~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glge-t~e~~~~~l~~l~~l~~~~~~i~~ 243 (348)
.++|++.+.+.. ..+..+...+.++.+++.|+.+...+++.-+- +.+.++.. +.++..+++.+.
T Consensus 97 ~~~Gvd~~ri~~-----------~~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~l~~---~~~~~~G~~~i~- 161 (320)
T 3dxi_A 97 IIGLVDMIRIAI-----------DPQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMNGFLSK---LKAIDKIADLFC- 161 (320)
T ss_dssp GTTTCSEEEEEE-----------CGGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGSTTSGGG---GGGGTTTCSEEE-
T ss_pred hhcCCCEEEEEe-----------cHHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCHHHHHHH---HHHhhCCCCEEE-
Confidence 346888776542 11247888999999999999987777663222 22222222 222221133322
Q ss_pred ccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCccee---ee--CCeeccC
Q psy8190 244 NNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANSI---FY--GDKLLTT 315 (348)
Q Consensus 244 ~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~~---~~--~~~~~~~ 315 (348)
.++|- ...+|.+..+++...|..+| ..+.+- -|+ +..-....++.+||+.+ +. |+ .+
T Consensus 162 -----l~Dt~----G~~~P~~~~~lv~~l~~~~~-~~i~~H--~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~---~~ 226 (320)
T 3dxi_A 162 -----MVDSF----GGITPKEVKNLLKEVRKYTH-VPVGFH--GHDNLQLGLINSITAIDDGIDFIDATITGMGR---GA 226 (320)
T ss_dssp -----EECTT----SCCCHHHHHHHHHHHHHHCC-SCEEEE--CBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSS---TT
T ss_pred -----ECccc----CCCCHHHHHHHHHHHHHhCC-CeEEEE--eCCCCccHHHHHHHHHHhCCCEEEEeccccCC---cc
Confidence 23332 23578889999998888776 222221 122 22334556899999998 11 22 12
Q ss_pred CCCCchHHHHHHHH
Q psy8190 316 DNTKTNDDSKLLKK 329 (348)
Q Consensus 316 ~g~~~~~~~~~i~~ 329 (348)
.+...+++..+++.
T Consensus 227 GN~~~E~lv~~L~~ 240 (320)
T 3dxi_A 227 GNLKMELLLTYLNK 240 (320)
T ss_dssp CBCBHHHHHHHHHH
T ss_pred cchhHHHHHHHHHh
Confidence 33445777777776
No 63
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=94.14 E-value=1.6 Score=40.38 Aligned_cols=146 Identities=15% Similarity=0.093 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhcCcEEEE--ecCCCCH-----HHHHHHHHhCCC
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKIGLETCL--TLGMLNE-----NQAYRLKKVGLD 170 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~~~~i~~--~~g~l~~-----e~l~~Lk~aG~~ 170 (348)
+.++..+.++.+.+.|+++|+.+=- .+.......+.+.++++..++.++++.+ ++..+.. +.+..+++.|++
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~dl~~f~~lGi~ 118 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSDLSFFAELGAD 118 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCCTHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCC
Confidence 5677788888899999999754321 1111123457788888888888888775 5655544 678899999999
Q ss_pred eeeccCCCC-HHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCC-eeeccccc
Q psy8190 171 YYNHNLDTS-PKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGLSESRDQRAELIFQLANLNPYPE-SVPINNLV 247 (348)
Q Consensus 171 ~i~~g~et~-~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~-~i~~~~l~ 247 (348)
.+-+...-+ .++ .+..+. .|++|....-. +.++ +..+.+.+...+ ....+.|.
T Consensus 119 gLRLD~Gf~~~ei----------------a~ls~n~~glkIeLNASt----~~~~----l~~l~~~~~n~~~l~acHNFY 174 (385)
T 1x7f_A 119 GIRLDVGFDGLTE----------------AKMTNNPYGLKIELNVSN----DIAY----LENILSHQANKSALIGCHNFY 174 (385)
T ss_dssp EEEESSCCSSHHH----------------HHHTTCTTCCEEEEETTS----CSSH----HHHHTTSSCCGGGEEEECCCB
T ss_pred EEEEcCCCCHHHH----------------HHHhcCCCCCEEEEeCcC----CHHH----HHHHHHcCCChHHeEEeeccC
Confidence 887644322 221 111122 35555444221 2222 233334441112 34667777
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8190 248 QIKGTPLYGSSILDPLEFIRTIAVARI 274 (348)
Q Consensus 248 P~~gT~l~~~~~~~~~~~~~~~a~~R~ 274 (348)
|.|.|-| +.+.+.+.-..++.
T Consensus 175 Pr~~TGL------s~~~f~~~n~~~k~ 195 (385)
T 1x7f_A 175 PQKFTGL------PYDYFIRCSERFKK 195 (385)
T ss_dssp CSTTCSB------CHHHHHHHHHHHHH
T ss_pred CCCCCCC------CHHHHHHHHHHHHH
Confidence 7777754 55666666666554
No 64
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=94.00 E-value=1.9 Score=37.01 Aligned_cols=181 Identities=13% Similarity=0.061 Sum_probs=94.7
Q ss_pred HHHHHHHHHHhCCCCEEEEecc--CCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC
Q psy8190 102 SVITAAQKAKSDGATRFCMGAA--WRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg--~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et 178 (348)
+..+.++.+.+.|++.+++.+- ...+. . .. ++++.+++ .++++.++.+..+++.++.+.++|++.+.++.++
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~-~---~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~ 107 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTG-D---NR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAA 107 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSC-C---CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCC-C---hH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchH
Confidence 4455556677889999988642 11111 1 22 66666665 5788988999999999999999999999987643
Q ss_pred CHHHHhccCCCCCHHHHHHHHHHHH-HcCCeeeEe--E--eeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCC
Q psy8190 179 SPKLYGDIISTRDYENRLNTLKNVR-NVGINICCG--G--IIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGT 252 (348)
Q Consensus 179 ~~e~l~~i~~~~~~~~~~~~i~~~~-~~G~~i~~~--~--i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT 252 (348)
+. +++...+.++.+. +.++.+.+. . +.|. ..+. +..+.+..+.+++ ++.+.++...+. |+
T Consensus 108 ----l~------~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~-~~~e~~~~~~~~G--~~~i~~~~~~~~-~~ 173 (244)
T 1vzw_A 108 ----LE------TPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGG-DLYETLDRLNKEG--CARYVVTDIAKD-GT 173 (244)
T ss_dssp ----HH------CHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCC-BHHHHHHHHHHTT--CCCEEEEEC------
T ss_pred ----hh------CHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCC-CHHHHHHHHHhCC--CCEEEEeccCcc-cc
Confidence 21 1222333333322 111222211 1 1222 1111 3445556666777 777766654432 22
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHh---CcceeeeCCee
Q psy8190 253 PLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLA---GANSIFYGDKL 312 (348)
Q Consensus 253 ~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~---GAn~~~~~~~~ 312 (348)
. ..++.+.+.++ +... +..+-+++|-.+ .+.....+.+ ||+.++.|..+
T Consensus 174 ~----~g~~~~~~~~i----~~~~-~ipvia~GGI~~--~~d~~~~~~~~~~Gadgv~vG~al 225 (244)
T 1vzw_A 174 L----QGPNLELLKNV----CAAT-DRPVVASGGVSS--LDDLRAIAGLVPAGVEGAIVGKAL 225 (244)
T ss_dssp ------CCCHHHHHHH----HHTC-SSCEEEESCCCS--HHHHHHHHTTGGGTEEEEEECHHH
T ss_pred c----CCCCHHHHHHH----HHhc-CCCEEEECCCCC--HHHHHHHHhhccCCCceeeeeHHH
Confidence 1 12333322222 2222 223333443221 2333446677 99999888644
No 65
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=93.88 E-value=0.82 Score=43.14 Aligned_cols=155 Identities=10% Similarity=0.055 Sum_probs=86.5
Q ss_pred CCceEEEEEEEeecCCCCCCCCcCCCCCCCCCCCccccccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc------ccH
Q psy8190 59 ANEIELAVLLSIKTGGCTEDCGYCPQSTHYNTEITATKILSIESVITAAQKAKSDGATRFCMGAAWRELKD------RDL 132 (348)
Q Consensus 59 g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~------~~~ 132 (348)
+.+..+.+++|+ |+- +|+. .+ .+.+++++.++.+.+.|+.-|=++|..+.|.. ...
T Consensus 188 ~~~~~vMGIlNv-TPD--------SFsD---gg------~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~ 249 (442)
T 3mcm_A 188 LANTIRMGIVNL-SNQ--------SFSD---GN------FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEF 249 (442)
T ss_dssp CCSSEEEEEEEC-SSC--------C-CC---CS------SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHH
T ss_pred CCCceEEEEEeC-CCC--------CCCC---CC------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHH
Confidence 456778888888 543 3332 11 46788999999999999998888764333311 234
Q ss_pred HHHHHHHHHHHh---cC-cEEEEecCCCCHHHHHHHHH--hCCCe-ee-ccCCCCHHHHhcc----------CC-C--CC
Q psy8190 133 DNIENMICEVKK---IG-LETCLTLGMLNENQAYRLKK--VGLDY-YN-HNLDTSPKLYGDI----------IS-T--RD 191 (348)
Q Consensus 133 ~~~~~l~~~i~~---~~-~~i~~~~g~l~~e~l~~Lk~--aG~~~-i~-~g~et~~e~l~~i----------~~-~--~~ 191 (348)
+++..+++.+++ .. ..+-++..+...+.++.--+ +|.+- |+ ++-+..+++++.+ +. + .+
T Consensus 250 ~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~~aGa~i~INDVsg~~d~~m~~v~a~~g~~vVlMh~~G~P~t 329 (442)
T 3mcm_A 250 NKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKHHDIIWMINDVECNNIEQKAQLIAKYNKKYVIIHNLGITDR 329 (442)
T ss_dssp HHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHHHGGGCCEEEECCCTTHHHHHHHHHHHTCEEEEECC------
T ss_pred HHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhhCCCCCEEEEcCCCCCChHHHHHHHHhCCeEEEECCCCCCcc
Confidence 566667888876 11 24455788888888888887 88876 54 2222234555421 11 1 11
Q ss_pred -------------HHHHHHHHHHHHHcCC---eeeEeEeeecCCCHHHHHHHHHHH
Q psy8190 192 -------------YENRLNTLKNVRNVGI---NICCGGIIGLSESRDQRAELIFQL 231 (348)
Q Consensus 192 -------------~~~~~~~i~~~~~~G~---~i~~~~i~Glget~e~~~~~l~~l 231 (348)
.+...+.++.+.++|+ ++..+--+|++.|.++-.+.++.+
T Consensus 330 mq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGF~Kt~~~nl~lL~~l 385 (442)
T 3mcm_A 330 NQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYFDIGFGFGKKSDTARYLLENI 385 (442)
T ss_dssp ----------CTHHHHHHHHHHHHHHHTCCGGGEEEECCCC------------CCH
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCCCCCHHHHHHHHHHH
Confidence 2333456777788888 366665567766665544444333
No 66
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=93.87 E-value=0.16 Score=43.95 Aligned_cols=192 Identities=9% Similarity=-0.025 Sum_probs=104.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEe--ccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 99 SIESVITAAQKAKSDGATRFCMG--AAWRELKDRDLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~--gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+...+.++++.+.+.|++.+++. .|.+-| .. ..=.++++.+++. ...+++-.. -.+..++.+.++|.|.+.+-
T Consensus 24 D~~~l~~~i~~~~~~gad~lhvDvmDG~fvp-n~--t~G~~~v~~lr~~~~~DvhLMv~-~p~~~i~~~~~aGAd~itvH 99 (237)
T 3cu2_A 24 NWLQLNEEVTTLLENQINVLHFDIADGQFSS-LF--TVGAIGIKYFPTHCFKDVHLMVR-NQLEVAKAVVANGANLVTLQ 99 (237)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS-CB--CBCTHHHHTSCTTSEEEEEEECS-CHHHHHHHHHHTTCSEEEEE
T ss_pred CcccHHHHHHHHHHcCCCEEEEEEecCcccc-ch--hhhHHHHHHHhhhCCCCeEEEEE-CHHHHHHHHHHcCCCEEEEe
Confidence 34455666677778888876553 442222 11 1112566666653 113332221 22567899999999998877
Q ss_pred CCCCHHHHhccCCCCCHHHHHHHHHHHHHc---------CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccc
Q psy8190 176 LDTSPKLYGDIISTRDYENRLNTLKNVRNV---------GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNL 246 (348)
Q Consensus 176 ~et~~e~l~~i~~~~~~~~~~~~i~~~~~~---------G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l 246 (348)
.|+.+ ...++++.+++. |..+...+ . ..|+.+.++ .+.+ ..+.+.++..
T Consensus 100 ~ea~~-------------~~~~~i~~i~~~~~~~~~~~~g~~~gv~l--~-p~Tp~~~l~---~~l~---~~D~vlvMsv 157 (237)
T 3cu2_A 100 LEQYH-------------DFALTIEWLAKQKTTYANQVYPVLIGACL--C-PETPISELE---PYLD---QIDVIQLLTL 157 (237)
T ss_dssp TTCTT-------------SHHHHHHHHTTCEEEETTEEEECEEEEEE--C-TTSCGGGGT---TTTT---TCSEEEEESE
T ss_pred cCCcc-------------cHHHHHHHHHhcccccccccCCceEEEEE--e-CCChHHHHH---HHhh---cCceeeeeee
Confidence 76631 123567778887 66554432 1 234433222 1222 2677777766
Q ss_pred cccCCCCCCCCCCCCHHHHHHHHHHHHHHCCC----CceeccccccccchhhHHHHHH--hCcceeeeCCeeccCCCCCc
Q psy8190 247 VQIKGTPLYGSSILDPLEFIRTIAVARITMPT----SRIRMSAGRKEMGETTQAFCFL--AGANSIFYGDKLLTTDNTKT 320 (348)
Q Consensus 247 ~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~----~~i~~s~g~~~l~~~~~~~~l~--~GAn~~~~~~~~~~~~g~~~ 320 (348)
.|--|+. . -....++-+...|.+.+. ..|.+.+| +..+....... +|||.++.|..+... .+
T Consensus 158 ~pgfggq----~--f~~~~l~ki~~lr~~~~~~~~~~~I~vdGG---I~~~~~~~~~~~~aGad~~VvGSaIf~~---d~ 225 (237)
T 3cu2_A 158 DPRNGTK----Y--PSELILDRVIQVEKRLGNRRVEKLINIDGS---MTLELAKYFKQGTHQIDWLVSGSALFSG---EL 225 (237)
T ss_dssp ETTTTEE----C--CHHHHHHHHHHHHHHHGGGGGGCEEEEESS---CCHHHHHHHHHSSSCCCCEEECGGGGSS---CH
T ss_pred ccCcCCe----e--cChhHHHHHHHHHHHHHhcCCCceEEEECC---cCHHHHHHHHHhCCCCcEEEEeeHHhCC---CH
Confidence 6533322 1 134556666666666543 23444443 22444556788 999999998765432 34
Q ss_pred hHHHHHHH
Q psy8190 321 NDDSKLLK 328 (348)
Q Consensus 321 ~~~~~~i~ 328 (348)
.+..+.++
T Consensus 226 ~~~~~~l~ 233 (237)
T 3cu2_A 226 KTNLKVWK 233 (237)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444444
No 67
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=93.85 E-value=2.4 Score=41.03 Aligned_cols=137 Identities=16% Similarity=0.198 Sum_probs=90.2
Q ss_pred CHHHHHHHHHHHHhCC-----CCEEEEeccCCCCC------cccHHHHHHHHHHHHhc----CcEEEEecCCCCHHHHHH
Q psy8190 99 SIESVITAAQKAKSDG-----ATRFCMGAAWRELK------DRDLDNIENMICEVKKI----GLETCLTLGMLNENQAYR 163 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G-----~~~i~l~gg~~~~~------~~~~~~~~~l~~~i~~~----~~~i~~~~g~l~~e~l~~ 163 (348)
+.+.+++.++.+.+.| +.-|=++|-.+-|. ....+++..+++.+++. ...+-++..+...+.++.
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~a~Vaea 326 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKE 326 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCcHHHHHH
Confidence 7899999999999999 88887876433232 12355677778888751 124455677778888888
Q ss_pred HHHhCCCeee-ccCCC-CHHHHhc---c--------C-C--CCC------H-----------------------------
Q psy8190 164 LKKVGLDYYN-HNLDT-SPKLYGD---I--------I-S--TRD------Y----------------------------- 192 (348)
Q Consensus 164 Lk~aG~~~i~-~g~et-~~e~l~~---i--------~-~--~~~------~----------------------------- 192 (348)
--++|.+-|+ ++-.. .+++++. . + + ..+ +
T Consensus 327 Al~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlmH~rG~p~tm~~~~~y~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 406 (545)
T 2bmb_A 327 AIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKT 406 (545)
T ss_dssp HHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEECCCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGGSTTHHHHC
T ss_pred HHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEECCCCCCCCccccccccccccccccchhccccccccccccccccc
Confidence 7778877776 33332 3444431 1 1 0 000 1
Q ss_pred -------HHHHHHHHHHHHcCCe---eeEeEeeecCCCHHHHHHHHHHHHhcC
Q psy8190 193 -------ENRLNTLKNVRNVGIN---ICCGGIIGLSESRDQRAELIFQLANLN 235 (348)
Q Consensus 193 -------~~~~~~i~~~~~~G~~---i~~~~i~Glget~e~~~~~l~~l~~l~ 235 (348)
+...+.++.+.++|+. +..+--+|++-|.++-.+.++.+..+.
T Consensus 407 ~vv~~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~ 459 (545)
T 2bmb_A 407 VLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILK 459 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCcccChHHHHHHHHHHHHHH
Confidence 1223567888899994 788888888888888777777777775
No 68
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=93.73 E-value=1.1 Score=38.36 Aligned_cols=71 Identities=18% Similarity=0.137 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhCCCCEEEEecc--CCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 102 SVITAAQKAKSDGATRFCMGAA--WRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg--~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
+..+.++.+.+.|++.+++.+- ...+. . .. +.++.+++ .++++.++.|..+++.++.+.++|++.+.++.+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~-~---~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRG-S---NH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTA 105 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSC-C---CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCC-C---hH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECch
Confidence 4455566777889999988642 11111 1 22 66666665 478998999999999999999999999998764
No 69
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=93.70 E-value=1.9 Score=37.74 Aligned_cols=185 Identities=14% Similarity=0.069 Sum_probs=97.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc----------------ccHHHHHHHHHHHHhc--CcEEEEe--cCC---
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD----------------RDLDNIENMICEVKKI--GLETCLT--LGM--- 155 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~----------------~~~~~~~~l~~~i~~~--~~~i~~~--~g~--- 155 (348)
+.++..+.++.+.+.|++.|.++.-..+|.. ...+...++++.+++. ++++.+- ...
T Consensus 29 ~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~ 108 (268)
T 1qop_A 29 GIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFN 108 (268)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHH
Confidence 3467778888888899999988653212210 0134456788888864 4555442 111
Q ss_pred -CCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 156 -LNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 156 -l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
-.+..++.+.++|++.+.+.-. ..++..+.++.++++|+... .++....+.+.+ +.+ .+.
T Consensus 109 ~g~~~~~~~~~~aGadgii~~d~-------------~~e~~~~~~~~~~~~g~~~i--~l~~p~t~~~~i-~~i---~~~ 169 (268)
T 1qop_A 109 NGIDAFYARCEQVGVDSVLVADV-------------PVEESAPFRQAALRHNIAPI--FICPPNADDDLL-RQV---ASY 169 (268)
T ss_dssp TCHHHHHHHHHHHTCCEEEETTC-------------CGGGCHHHHHHHHHTTCEEE--CEECTTCCHHHH-HHH---HHH
T ss_pred hhHHHHHHHHHHcCCCEEEEcCC-------------CHHHHHHHHHHHHHcCCcEE--EEECCCCCHHHH-HHH---Hhh
Confidence 1257899999999998875321 12455566788889998652 122223333333 322 223
Q ss_pred CCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 235 NPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 235 ~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
. ...+.+..+ .|+- ...........+.+...|... +..+-+..|-.+ ++....++.+|||.++.|..+
T Consensus 170 ~--~g~v~~~s~---~G~t--G~~~~~~~~~~~~i~~lr~~~-~~pi~vggGI~t--~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 170 G--RGYTYLLSR---SGVT--GAENRGALPLHHLIEKLKEYH-AAPALQGFGISS--PEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp C--CSCEEEESS---SSCC--CSSSCC--CCHHHHHHHHHTT-CCCEEEESSCCS--HHHHHHHHHTTCSEEEECHHH
T ss_pred C--CCcEEEEec---CCcC--CCccCCCchHHHHHHHHHhcc-CCcEEEECCCCC--HHHHHHHHHcCCCEEEEChHH
Confidence 3 223222221 1221 111111122334445555544 333433333211 444455688999999988754
No 70
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=93.32 E-value=1.5 Score=38.61 Aligned_cols=188 Identities=12% Similarity=0.094 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHhc--CcEEEE-----ecCCCCHHHHHHHHHhCCCeeeccCCC-C--HHHHhc-c-CCCCCHHHHHHHHH
Q psy8190 133 DNIENMICEVKKI--GLETCL-----TLGMLNENQAYRLKKVGLDYYNHNLDT-S--PKLYGD-I-ISTRDYENRLNTLK 200 (348)
Q Consensus 133 ~~~~~l~~~i~~~--~~~i~~-----~~g~l~~e~l~~Lk~aG~~~i~~g~et-~--~e~l~~-i-~~~~~~~~~~~~i~ 200 (348)
+...++.+++-.. ++++.+ .|+.-....++.||++|+..+ ++.-| . +-.|+. + -.+.++++..+.++
T Consensus 79 ~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~ 157 (286)
T 2p10_A 79 QIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIA 157 (286)
T ss_dssp HHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHH
Confidence 4566777766542 555553 355566688999999999998 77654 2 444432 3 24679999999999
Q ss_pred HHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCH----HHHHHHHHHHHHHC
Q psy8190 201 NVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDP----LEFIRTIAVARITM 276 (348)
Q Consensus 201 ~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~----~~~~~~~a~~R~~l 276 (348)
.+++.|+.+.... .++++- ..+.+++ +|.|-+++=.-..| -+......+. +..-+++..+|.+.
T Consensus 158 ~A~~~gL~Ti~~v-----~~~eeA----~amA~ag--pDiI~~h~glT~gg-lIG~~~avs~~~~~e~i~~i~~a~~~vn 225 (286)
T 2p10_A 158 EAHKLDLLTTPYV-----FSPEDA----VAMAKAG--ADILVCHMGLTTGG-AIGARSGKSMDDCVSLINECIEAARTIR 225 (286)
T ss_dssp HHHHTTCEECCEE-----CSHHHH----HHHHHHT--CSEEEEECSCC----------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCeEEEec-----CCHHHH----HHHHHcC--CCEEEECCCCCCCC-cccCCCcccHHHhHHHHHHHHHHHHHhC
Confidence 9999999654331 244443 3445777 88876543110111 1111223343 34566777888888
Q ss_pred CCCceeccccccccchhhHHHHHHh--CcceeeeCCeeccCC-CCCchHHHHHHHHcCCCc
Q psy8190 277 PTSRIRMSAGRKEMGETTQAFCFLA--GANSIFYGDKLLTTD-NTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 277 p~~~i~~s~g~~~l~~~~~~~~l~~--GAn~~~~~~~~~~~~-g~~~~~~~~~i~~~G~~p 334 (348)
|+..+-..+|--. .++-.+.++.. |++.++....+.... .....+..+.++...+.|
T Consensus 226 pdvivLc~gGpIs-tpeDv~~~l~~t~G~~G~~gASsier~p~e~ai~~~~~~fk~~~~~~ 285 (286)
T 2p10_A 226 DDIIILSHGGPIA-NPEDARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQP 285 (286)
T ss_dssp SCCEEEEESTTCC-SHHHHHHHHHHCTTCCEEEESHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred CCcEEEecCCCCC-CHHHHHHHHhcCCCccEEEeehhhhcCCHHHHHHHHHHHHHhcccCC
Confidence 8864432222111 24455667787 999997654221111 011134455555555554
No 71
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.19 E-value=1.7 Score=37.24 Aligned_cols=162 Identities=13% Similarity=0.076 Sum_probs=98.2
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
..++++....++.+.+.|++.+-+.-- ++. -.+.++.+++. ++.+... ..++.+.++...++|.+.+-.
T Consensus 42 ~~~~~~a~~~a~al~~gGi~~iEvt~~--t~~------a~e~I~~l~~~~~~~~iGaG-TVlt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 42 IDNAEDIIPLGKVLAENGLPAAEITFR--SDA------AVEAIRLLRQAQPEMLIGAG-TILNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETT--STT------HHHHHHHHHHHCTTCEEEEE-CCCSHHHHHHHHHHTCSEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCC--CCC------HHHHHHHHHHhCCCCEEeEC-CcCCHHHHHHHHHcCCCEEEe
Confidence 356789999999999999998877432 221 23455555542 3434322 367899999999999997752
Q ss_pred cCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCC
Q psy8190 175 NLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPL 254 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l 254 (348)
.+.+ .+.++.+++.|+.+-.+.. |+.++... .+++ .+.+.+++- .++
T Consensus 113 -P~~~----------------~~vi~~~~~~gi~~ipGv~-----TptEi~~A----~~~G--ad~vK~FPa-----~~~ 159 (232)
T 4e38_A 113 -PGFN----------------PNTVRACQEIGIDIVPGVN-----NPSTVEAA----LEMG--LTTLKFFPA-----EAS 159 (232)
T ss_dssp -SSCC----------------HHHHHHHHHHTCEEECEEC-----SHHHHHHH----HHTT--CCEEEECST-----TTT
T ss_pred -CCCC----------------HHHHHHHHHcCCCEEcCCC-----CHHHHHHH----HHcC--CCEEEECcC-----ccc
Confidence 2211 2445668888888765533 77776554 4677 888877432 211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 255 YGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.. ...+...+--+|+..+-..+|- + .+.....+.+||.....|..+
T Consensus 160 ------gG---~~~lkal~~p~p~ip~~ptGGI-~--~~n~~~~l~aGa~~~vgGs~l 205 (232)
T 4e38_A 160 ------GG---ISMVKSLVGPYGDIRLMPTGGI-T--PSNIDNYLAIPQVLACGGTWM 205 (232)
T ss_dssp ------TH---HHHHHHHHTTCTTCEEEEBSSC-C--TTTHHHHHTSTTBCCEEECGG
T ss_pred ------cC---HHHHHHHHHHhcCCCeeeEcCC-C--HHHHHHHHHCCCeEEEECchh
Confidence 11 1444455555676433333332 2 233445678888887666544
No 72
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=93.14 E-value=2.3 Score=37.35 Aligned_cols=184 Identities=14% Similarity=0.086 Sum_probs=99.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc----------------ccHHHHHHHHHHHHhc--CcEEEEec--CC---
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD----------------RDLDNIENMICEVKKI--GLETCLTL--GM--- 155 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~----------------~~~~~~~~l~~~i~~~--~~~i~~~~--g~--- 155 (348)
+++...+.++.+.+.|++-+.++--..+|.- ...+.+.++++.+++. .+++.+-. ..
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFA 109 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 4566777778888889998888632212211 1233667888888863 45554421 11
Q ss_pred -CCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 156 -LNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 156 -l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
=.+..++.++++|++.+.+. ...+++..+..+.++++|+... +++. ..|.+++++. +.+.
T Consensus 110 ~g~e~f~~~~~~aGvdgvii~-------------Dlp~ee~~~~~~~~~~~gl~~i--~lia-P~t~~eri~~---i~~~ 170 (267)
T 3vnd_A 110 NGIDEFYTKAQAAGVDSVLIA-------------DVPVEESAPFSKAAKAHGIAPI--FIAP-PNADADTLKM---VSEQ 170 (267)
T ss_dssp HCHHHHHHHHHHHTCCEEEET-------------TSCGGGCHHHHHHHHHTTCEEE--CEEC-TTCCHHHHHH---HHHH
T ss_pred hhHHHHHHHHHHcCCCEEEeC-------------CCCHhhHHHHHHHHHHcCCeEE--EEEC-CCCCHHHHHH---HHHh
Confidence 12568999999999998752 1233456677888899998741 1222 3343333333 3334
Q ss_pred CCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCe
Q psy8190 235 NPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDK 311 (348)
Q Consensus 235 ~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~ 311 (348)
. ...+......+.-|+. ..-+ .+....+...|.... ..+-+..|-.+ ++.....+.+|||.++.|..
T Consensus 171 ~--~gfvY~vS~~GvTG~~--~~~~---~~~~~~v~~vr~~~~-~pv~vGfGI~~--~e~~~~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 171 G--EGYTYLLSRAGVTGTE--SKAG---EPIENILTQLAEFNA-PPPLLGFGIAE--PEQVRAAIKAGAAGAISGSA 237 (267)
T ss_dssp C--CSCEEESCCCCCC-------------CHHHHHHHHHTTTC-CCEEECSSCCS--HHHHHHHHHTTCSEEEECHH
T ss_pred C--CCcEEEEecCCCCCCc--cCCc---HHHHHHHHHHHHhcC-CCEEEECCcCC--HHHHHHHHHcCCCEEEECHH
Confidence 3 3344443444433432 1111 234555566665542 22333332111 33333378899999988863
No 73
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=92.98 E-value=1.1 Score=37.59 Aligned_cols=178 Identities=13% Similarity=0.133 Sum_probs=99.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCC-CHH-HHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGML-NEN-QAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l-~~e-~l~~Lk~aG~~~i~ 173 (348)
.+.++.++.++.+. .|+.-+-++- |. ....=.++++.+++. +..+.++.... ..+ .++.+.++|++.+.
T Consensus 10 ~~~~~~~~~~~~~~-~~~diie~G~----p~--~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~ 82 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV-DDVDIIEVGT----PF--LIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVT 82 (211)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEECH----HH--HHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHhh-cCccEEEeCc----HH--HHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEE
Confidence 45677777777764 4666544421 11 022234667777763 66766654432 233 48999999999998
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP 253 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~ 253 (348)
+..+.. .+...+.++.+++.|+.+... +.+ .+|. .+.+..+.+.+ .+.+.+.+-. .|..
T Consensus 83 v~~~~~------------~~~~~~~~~~~~~~g~~~~v~-~~~-~~t~---~~~~~~~~~~g--~d~i~v~~g~--~g~~ 141 (211)
T 3f4w_A 83 VLGVTD------------VLTIQSCIRAAKEAGKQVVVD-MIC-VDDL---PARVRLLEEAG--ADMLAVHTGT--DQQA 141 (211)
T ss_dssp EETTSC------------HHHHHHHHHHHHHHTCEEEEE-CTT-CSSH---HHHHHHHHHHT--CCEEEEECCH--HHHH
T ss_pred EeCCCC------------hhHHHHHHHHHHHcCCeEEEE-ecC-CCCH---HHHHHHHHHcC--CCEEEEcCCC--cccc
Confidence 755432 234556778888889876433 112 2343 34455566777 6776543111 1111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 254 LYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 254 l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
+ ++.+ .+.+...|..+++..+.+.+|- + .+.....+.+||+.++.|..+.
T Consensus 142 ~---~~~~----~~~i~~l~~~~~~~~i~~~gGI-~--~~~~~~~~~~Gad~vvvGsai~ 191 (211)
T 3f4w_A 142 A---GRKP----IDDLITMLKVRRKARIAVAGGI-S--SQTVKDYALLGPDVVIVGSAIT 191 (211)
T ss_dssp T---TCCS----HHHHHHHHHHCSSCEEEEESSC-C--TTTHHHHHTTCCSEEEECHHHH
T ss_pred c---CCCC----HHHHHHHHHHcCCCcEEEECCC-C--HHHHHHHHHcCCCEEEECHHHc
Confidence 1 1112 2334445555666555555543 2 3334556789999998886553
No 74
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=92.95 E-value=0.64 Score=40.59 Aligned_cols=71 Identities=14% Similarity=-0.017 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 104 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 104 ~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.+.++.+.+.|+..+.+.+-....... ....++++.+++ .++++.+..|..+.+.++.+.++|++.+.++-
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~~~--g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~ 104 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGTKS--GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAAS 104 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSCSS--CCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHHCCCCEEEEEecCcccCCC--cccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhH
Confidence 444555667799999887631110000 112456666665 47888888888888999999999999998864
No 75
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=92.88 E-value=2.2 Score=37.12 Aligned_cols=181 Identities=12% Similarity=0.114 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCC----------------CcccHHHHHHHHHHHHhc-CcEEEEecCCCCHH---
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWREL----------------KDRDLDNIENMICEVKKI-GLETCLTLGMLNEN--- 159 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~----------------~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e--- 159 (348)
.++..+.++.+.+.|++.|.++....+| ...+.+...++++.+++. ++++.+.. ..+..
T Consensus 31 ~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~-~~~~~~~~ 109 (262)
T 1rd5_A 31 LATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLS-YYKPIMFR 109 (262)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEEC-CSHHHHSC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEe-cCcHHHHH
Confidence 4677788888888999999886431111 012456677888888874 56665432 11111
Q ss_pred HHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCC
Q psy8190 160 QAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYP 238 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~ 238 (348)
.++.+.++|++.+.+.-.+. ++..+.++.+++.|+.. ++++ -.|..+..+.+ .... .
T Consensus 110 ~~~~a~~aGadgv~v~d~~~-------------~~~~~~~~~~~~~g~~~----i~~~a~~t~~e~~~~~---~~~~--~ 167 (262)
T 1rd5_A 110 SLAKMKEAGVHGLIVPDLPY-------------VAAHSLWSEAKNNNLEL----VLLTTPAIPEDRMKEI---TKAS--E 167 (262)
T ss_dssp CTHHHHHTTCCEEECTTCBT-------------TTHHHHHHHHHHTTCEE----CEEECTTSCHHHHHHH---HHHC--C
T ss_pred HHHHHHHcCCCEEEEcCCCh-------------hhHHHHHHHHHHcCCce----EEEECCCCCHHHHHHH---HhcC--C
Confidence 23448999999988632111 23455667788899873 3333 33444433333 2333 2
Q ss_pred CeeecccccccCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 239 ESVPINNLVQIKG-TPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 239 ~~i~~~~l~P~~g-T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
..+.+.. .+| |.-.. . . .....+.+...|... +..|-+..|-.+ ++.....+.+||+.++.|..+
T Consensus 168 g~v~~~s---~~G~tG~~~-~-~-~~~~~~~i~~v~~~~-~~pI~vgGGI~~--~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 168 GFVYLVS---VNGVTGPRA-N-V-NPRVESLIQEVKKVT-NKPVAVGFGISK--PEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp SCEEEEC---SSCCBCTTS-C-B-CTHHHHHHHHHHHHC-SSCEEEESCCCS--HHHHHHHHHTTCSEEEECHHH
T ss_pred CeEEEec---CCCCCCCCc-C-C-CchHHHHHHHHHhhc-CCeEEEECCcCC--HHHHHHHHHcCCCEEEEChHH
Confidence 2332222 233 22111 1 1 123444555555544 323333333211 344445677899999888654
No 76
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=92.66 E-value=5 Score=35.35 Aligned_cols=221 Identities=14% Similarity=0.102 Sum_probs=115.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcE-EEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE-TCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~-i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.+++++++.+ .+.|+...++++.. ....+-+++.+++++-...-.. +.+++. .+.+.++.+.+.|+..|-+..
T Consensus 53 ~~~e~~l~~~---~~~GV~~~V~v~~~--~~~~~n~~~~~~~~~~p~r~~g~~~v~P~-~~~~eL~~l~~~gv~Gi~l~~ 126 (294)
T 4i6k_A 53 ATVQSFISHL---DEHNFTHGVLVQPS--FLGTNNQAMLNAIQQYPDRLKGIAVVQHT-TTFNELVNLKAQGIVGVRLNL 126 (294)
T ss_dssp BCHHHHHHHH---HHTTCCEEEEECCG--GGTTCCHHHHHHHHHSTTTEEEEECCCTT-CCHHHHHHHHTTTEEEEEEEC
T ss_pred CCHHHHHHHH---HHcCCCeEEEecCc--ccccchHHHHHHHHHCCCeEEEEEEeCCc-ccHHHHHHHHHCCCcEEEecc
Confidence 5677777654 56799987766541 1122335666666543221111 223443 356888999888887777544
Q ss_pred CCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCC
Q psy8190 177 DTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG 256 (348)
Q Consensus 177 et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~ 256 (348)
.... .+....+.+...++.+.+.|+.+..+. + ..++.+....+++.. . .+.+.-+ |.|...
T Consensus 127 ~~~~------~~~~~~~~~~~~~~~a~~~glpv~iH~--~----~~~l~~~~~~l~~~p--~-~~Vi~H~----g~p~~~ 187 (294)
T 4i6k_A 127 FGLN------LPALNTPDWQKFLRNVESLNWQVELHA--P----PKYLVQLLPQLNEYS--F-DVVIDHF----GRVDPV 187 (294)
T ss_dssp TTSC------CCCSSSHHHHHHHHHHHHTTCEEEEEC--C----HHHHHHHHHHHTTSS--S-CEEESGG----GCCCTT
T ss_pred CCCC------CCCcccHHHHHHHHHHHHcCCEEEEee--C----cchHHHHHHHHHHCC--C-CEEEECC----CCCCCC
Confidence 2210 011233677888999999999987663 1 233444455555542 2 2222221 222211
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCceeccccc-ccc--------chhhHHHHHHhCcceeeeCCee-cc-CCC-CCchHHH
Q psy8190 257 SSILDPLEFIRTIAVARITMPTSRIRMSAGR-KEM--------GETTQAFCFLAGANSIFYGDKL-LT-TDN-TKTNDDS 324 (348)
Q Consensus 257 ~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~-~~l--------~~~~~~~~l~~GAn~~~~~~~~-~~-~~g-~~~~~~~ 324 (348)
... .......+..+++ .|+..+.+|+-. ..- ........-..|++.++.|... .. ..+ ++.....
T Consensus 188 ~g~-~~~~~~~~~~l~~--~~nv~~k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~~~~~y~~~~ 264 (294)
T 4i6k_A 188 KGI-EDPDYQKFLSLLN--VKQHWIKVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQHESLITYEDAI 264 (294)
T ss_dssp TCT-TCHHHHHHHHHCC--TTTEEEECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTCTTTCCHHHHH
T ss_pred CCC-CCHHHHHHHHHHh--CCCEEEEecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCCcCCCCHHHHH
Confidence 111 1122222333332 467777766321 110 0233344455799999777532 22 222 3445578
Q ss_pred HHHHHcCCCchhhhhHHhhhhc
Q psy8190 325 KLLKKLGINTRNIKIKMKNNIK 346 (348)
Q Consensus 325 ~~i~~~G~~p~~~~~~~~~~~~ 346 (348)
+.+.+.+..+.++..-+-.|.+
T Consensus 265 ~~l~~~~~~~~~~~~i~~~NA~ 286 (294)
T 4i6k_A 265 KAFKQIVFDKHEQCLILNQNPT 286 (294)
T ss_dssp HHHHHHCCCHHHHHHHHTHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHCHH
Confidence 8888888777766555555543
No 77
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=92.07 E-value=5.1 Score=42.65 Aligned_cols=206 Identities=15% Similarity=0.067 Sum_probs=122.8
Q ss_pred cCHHHHHHHHHHHHhC--CCCEEEEeccCCC------CCcccHHHHHHHHHHHHhcCcEEE--Eec----C------CCC
Q psy8190 98 LSIESVITAAQKAKSD--GATRFCMGAAWRE------LKDRDLDNIENMICEVKKIGLETC--LTL----G------MLN 157 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~--G~~~i~l~gg~~~------~~~~~~~~~~~l~~~i~~~~~~i~--~~~----g------~l~ 157 (348)
++.++.+..++.+.+. |+.++-..||.+. ....+++.+..+.+.+. +..+. +.. | .+.
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~--~~~~~~l~R~~n~vgy~~~pd~v~ 629 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIP--NVLFQMLLRASNAVGYKNYPDNVI 629 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCC--SSEEEEEEETTTBTCSSCCCHHHH
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCC--CCeEEEEeccccccccccCCchhH
Confidence 6789999999988887 8888866554210 11122333333322222 33332 221 1 123
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeee---c------CCCHHHHHHHH
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIG---L------SESRDQRAELI 228 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~G---l------get~e~~~~~l 228 (348)
...++...++|++.+.+..-.+ ........++.+++.|..+...+.|- + -.+.+.+++.+
T Consensus 630 ~~~v~~a~~~Gvd~irif~~~s-----------d~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a 698 (1150)
T 3hbl_A 630 HKFVQESAKAGIDVFRIFDSLN-----------WVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLA 698 (1150)
T ss_dssp HHHHHHHHHTTCCEEEEECTTC-----------CGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEEeeCC-----------HHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHH
Confidence 4568888999999987654332 11233456777888897766555554 2 14678889999
Q ss_pred HHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc---cchhhHHHHHHhCcce
Q psy8190 229 FQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE---MGETTQAFCFLAGANS 305 (348)
Q Consensus 229 ~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~---l~~~~~~~~l~~GAn~ 305 (348)
+.+.+++ .+.+.+- .| ....++....+++...|..+ +..|.+- .|+ +..-....|+.+||+.
T Consensus 699 ~~~~~~G--a~~i~l~------Dt----~G~~~P~~~~~lv~~l~~~~-~~~i~~H--~Hnt~G~a~An~laA~~aGa~~ 763 (1150)
T 3hbl_A 699 KELEREG--FHILAIK------DM----AGLLKPKAAYELIGELKSAV-DLPIHLH--THDTSGNGLLTYKQAIDAGVDI 763 (1150)
T ss_dssp HHHHHTT--CSEEEEE------ET----TCCCCHHHHHHHHHHHHHHC-CSCEEEE--ECBTTSCHHHHHHHHHHTTCSE
T ss_pred HHHHHcC--CCeeeEc------Cc----cCCCCHHHHHHHHHHHHHhc-CCeEEEE--eCCCCcHHHHHHHHHHHhCCCE
Confidence 9999998 6665432 22 13457788888888888765 3333221 232 1223456688999999
Q ss_pred ee---e--CCeeccCCCCCchHHHHHHHHcCCCc
Q psy8190 306 IF---Y--GDKLLTTDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 306 ~~---~--~~~~~~~~g~~~~~~~~~i~~~G~~p 334 (348)
+= . |+ .+.++..+++..+++..|+.+
T Consensus 764 vD~ai~GlG~---~~gn~~lE~lv~~L~~~g~~t 794 (1150)
T 3hbl_A 764 IDTAVASMSG---LTSQPSANSLYYALNGFPRHL 794 (1150)
T ss_dssp EEEBCGGGCS---BTSCCBHHHHHHHTTTSSCCB
T ss_pred EEEeccccCC---CCCCccHHHHHHHHHhcCCCc
Confidence 81 1 22 122233467777888888764
No 78
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=92.06 E-value=5.9 Score=34.78 Aligned_cols=172 Identities=12% Similarity=0.074 Sum_probs=102.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.++.+ .++.+.+.|+..+.+.+... ...-..+++ +.+++ .++++-..-..+++.++...+.+|.|.|.++.
T Consensus 79 ~dp~~---~A~~y~~~GA~~IsVltd~~-~f~Gs~~~L----~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 79 FDPPA---LAKAYEEGGAACLSVLTDTP-SFQGAPEFL----TAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIM 150 (272)
T ss_dssp CCHHH---HHHHHHHTTCSEEEEECCST-TTCCCHHHH----HHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEET
T ss_pred CCHHH---HHHHHHHCCCCEEEEecccc-ccCCCHHHH----HHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcc
Confidence 34544 44556678999987765411 111234444 34444 46676555556888899999999999998765
Q ss_pred CCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCC
Q psy8190 177 DTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG 256 (348)
Q Consensus 177 et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~ 256 (348)
-. .+.++..+.++.+++.|+.+-+.+ +|.+++ ..+.+++ ++.|+++.... +.+
T Consensus 151 a~-----------L~~~~l~~l~~~a~~lGl~~lvev-----h~~eEl----~~A~~~g--a~iIGinnr~l---~t~-- 203 (272)
T 3tsm_A 151 AS-----------VDDDLAKELEDTAFALGMDALIEV-----HDEAEM----ERALKLS--SRLLGVNNRNL---RSF-- 203 (272)
T ss_dssp TT-----------SCHHHHHHHHHHHHHTTCEEEEEE-----CSHHHH----HHHTTSC--CSEEEEECBCT---TTC--
T ss_pred cc-----------cCHHHHHHHHHHHHHcCCeEEEEe-----CCHHHH----HHHHhcC--CCEEEECCCCC---ccC--
Confidence 32 134566677888999998654332 355553 4455777 88888875422 112
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCceecc-ccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 257 SSILDPLEFIRTIAVARITMPTSRIRMS-AGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 257 ~~~~~~~~~~~~~a~~R~~lp~~~i~~s-~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.++.+...++. -.+|...+-++ +|-.+ ++.......+||+.++.|+.+
T Consensus 204 --~~dl~~~~~L~----~~ip~~~~vIaesGI~t--~edv~~l~~~Ga~gvLVG~al 252 (272)
T 3tsm_A 204 --EVNLAVSERLA----KMAPSDRLLVGESGIFT--HEDCLRLEKSGIGTFLIGESL 252 (272)
T ss_dssp --CBCTHHHHHHH----HHSCTTSEEEEESSCCS--HHHHHHHHTTTCCEEEECHHH
T ss_pred --CCChHHHHHHH----HhCCCCCcEEEECCCCC--HHHHHHHHHcCCCEEEEcHHH
Confidence 13333333332 23565332222 32222 444455678999999998865
No 79
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=92.02 E-value=0.53 Score=40.40 Aligned_cols=183 Identities=15% Similarity=0.129 Sum_probs=101.1
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEe--ccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHH-HHHHHHHhCCCee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMG--AAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNEN-QAYRLKKVGLDYY 172 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~--gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e-~l~~Lk~aG~~~i 172 (348)
.+.-.+.++++.+.+.|++.+++- .|.+-| ... .=..+++.+++. +..+-++.-..+++ .++.+.+ .+.+
T Consensus 15 ~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvp-n~t--~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~--Ad~i 89 (227)
T 1tqx_A 15 SNISKLAEETQRMESLGAEWIHLDVMDMHFVP-NLS--FGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT--SNQL 89 (227)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSS-CBC--CCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT--SSEE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEEEeCCcCc-chh--cCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh--CCEE
Confidence 344556666677777888876543 342222 221 113667777763 34554444433333 3444444 6777
Q ss_pred eccCCCCHHHHhccCCCCCHHHHHHHHH---HHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccccccc
Q psy8190 173 NHNLDTSPKLYGDIISTRDYENRLNTLK---NVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQI 249 (348)
Q Consensus 173 ~~g~et~~e~l~~i~~~~~~~~~~~~i~---~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~ 249 (348)
.+-.|+.++ +.. ++++ .+++.|.++...+ .. .|+. +.++.+.+++. ++.+-++...|-
T Consensus 90 tvH~ea~~~---------~~~---~~i~~~~~i~~~G~k~gval--np-~tp~---~~~~~~l~~g~-~D~VlvmsV~pG 150 (227)
T 1tqx_A 90 TFHFEALNE---------DTE---RCIQLAKEIRDNNLWCGISI--KP-KTDV---QKLVPILDTNL-INTVLVMTVEPG 150 (227)
T ss_dssp EEEGGGGTT---------CHH---HHHHHHHHHHTTTCEEEEEE--CT-TSCG---GGGHHHHTTTC-CSEEEEESSCTT
T ss_pred EEeecCCcc---------CHH---HHHHHHHHHHHcCCeEEEEe--CC-CCcH---HHHHHHhhcCC-cCEEEEeeeccC
Confidence 766665211 222 4556 8889999876653 22 3432 23344445321 688877777754
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 250 KGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 250 ~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
-|. +.. ....++-+...|.+.++..|.+.+| ++.+.......+|||.++.|..+.
T Consensus 151 f~g----q~f--~~~~l~ki~~lr~~~~~~~I~VdGG---I~~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 151 FGG----QSF--MHDMMGKVSFLRKKYKNLNIQVDGG---LNIETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp CSS----CCC--CGGGHHHHHHHHHHCTTCEEEEESS---CCHHHHHHHHHHTCCEEEESHHHH
T ss_pred CCC----ccc--chHHHHHHHHHHHhccCCeEEEECC---CCHHHHHHHHHcCCCEEEEeHHHh
Confidence 332 211 1133444455666666555666654 234455667899999999887654
No 80
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.94 E-value=0.95 Score=43.63 Aligned_cols=119 Identities=12% Similarity=0.020 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecC-CCCHHHHHHHHHhCCCeeeccCCC-
Q psy8190 101 ESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLG-MLNENQAYRLKKVGLDYYNHNLDT- 178 (348)
Q Consensus 101 eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g-~l~~e~l~~Lk~aG~~~i~~g~et- 178 (348)
++-.+.++.+.+.|+.-+++.+. +. .-+...++++.+++....+.+-.| ..+.+..+.|.++|+|.+-+|+..
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~a--hG---hs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpG 354 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSS--QG---NSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSG 354 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCS--CC---CSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCS
T ss_pred ccHHHHHHHHHhcCCcEEEEecc--cc---ccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCC
Confidence 45566778888999999988765 11 126788999999986333333333 688999999999999999998876
Q ss_pred CHHHH---hccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHH
Q psy8190 179 SPKLY---GDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELI 228 (348)
Q Consensus 179 ~~e~l---~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l 228 (348)
+--.- ..++.+ ....+.++-+.+++.|+++.++.= -.+..|+...+
T Consensus 355 SiCtTr~v~GvG~P-Q~tAi~~~a~~a~~~~vpvIADGG---I~~sGDi~KAl 403 (556)
T 4af0_A 355 SICITQEVMAVGRP-QGTAVYAVAEFASRFGIPCIADGG---IGNIGHIAKAL 403 (556)
T ss_dssp TTBCCTTTCCSCCC-HHHHHHHHHHHHGGGTCCEEEESC---CCSHHHHHHHH
T ss_pred cccccccccCCCCc-HHHHHHHHHHHHHHcCCCEEecCC---cCcchHHHHHh
Confidence 32111 122211 456788888999999988766521 23556666655
No 81
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=91.94 E-value=0.62 Score=42.89 Aligned_cols=78 Identities=9% Similarity=0.000 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhcCcEEEE--ecC-----CCCHHHHHHHHHhCCC
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKIGLETCL--TLG-----MLNENQAYRLKKVGLD 170 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~~~~i~~--~~g-----~l~~e~l~~Lk~aG~~ 170 (348)
+.++..+.++.+.+.|+++|+.+=- .+.......+.+.++++..++.++++.+ ++. .++.+.+..+++.|++
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lGi~ 94 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIELGVT 94 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCC
Confidence 3567778888899999999844322 1111123457788888888888888875 332 2345778899999999
Q ss_pred eeeccC
Q psy8190 171 YYNHNL 176 (348)
Q Consensus 171 ~i~~g~ 176 (348)
.+-+..
T Consensus 95 glRLD~ 100 (372)
T 2p0o_A 95 GLRMDY 100 (372)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 887644
No 82
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=91.23 E-value=5.8 Score=33.04 Aligned_cols=164 Identities=11% Similarity=0.094 Sum_probs=93.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEe-cCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLT-LGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~-~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
..+++++.+.++.+.+.|++.|.+... ++. .. +.++.+.+ .+..+.+. .+..+.+.++...++|++.+.+
T Consensus 15 ~~d~~~~~~~~~~~~~~G~~~i~l~~~--~~~--~~----~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~ 86 (212)
T 2v82_A 15 GITPDEALAHVGAVIDAGFDAVEIPLN--SPQ--WE----QSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVT 86 (212)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEEETT--STT--HH----HHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeCC--Chh--HH----HHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEe
Confidence 356788888888888889999988544 221 22 33333433 34333332 2356788999999999999974
Q ss_pred cCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCC
Q psy8190 175 NLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPL 254 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l 254 (348)
+.. . .+.++.+++.|..+ ++| -.|.++.. ...+.+ .+.+.+++ |.
T Consensus 87 ~~~-~----------------~~~~~~~~~~g~~~----~~g-~~t~~e~~----~a~~~G--~d~v~v~~------t~- 131 (212)
T 2v82_A 87 PNI-H----------------SEVIRRAVGYGMTV----CPG-CATATEAF----TALEAG--AQALKIFP------SS- 131 (212)
T ss_dssp SSC-C----------------HHHHHHHHHTTCEE----ECE-ECSHHHHH----HHHHTT--CSEEEETT------HH-
T ss_pred CCC-C----------------HHHHHHHHHcCCCE----Eee-cCCHHHHH----HHHHCC--CCEEEEec------CC-
Confidence 321 1 12356677788764 334 25666542 334566 78777522 11
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCC-CCceeccccccccchhhHHHHHHhCcceeeeCCeecc
Q psy8190 255 YGSSILDPLEFIRTIAVARITMP-TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLT 314 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~a~~R~~lp-~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~ 314 (348)
+.+ +..+...+..++ +..+-+.+|- + .+.....+.+||+.+..|..+..
T Consensus 132 ----~~g----~~~~~~l~~~~~~~ipvia~GGI-~--~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 132 ----AFG----PQYIKALKAVLPSDIAVFAVGGV-T--PENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp ----HHC----HHHHHHHHTTSCTTCEEEEESSC-C--TTTHHHHHHHTCSEEEECTTTCC
T ss_pred ----CCC----HHHHHHHHHhccCCCeEEEeCCC-C--HHHHHHHHHcCCCEEEEChHHhC
Confidence 111 233333344455 3333344432 2 23334457799999988876533
No 83
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=90.98 E-value=3.7 Score=37.54 Aligned_cols=82 Identities=12% Similarity=0.117 Sum_probs=58.5
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEe--ccC------CCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMG--AAW------RELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~--gg~------~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~ 169 (348)
.+++++.+.++...+.|...+-+. |+. ......+.+.+.++++..++.++.+.++.. ..+.++...++|+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~~~~~g~ 241 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAH--GASGIREAVRAGV 241 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEEC--SHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHhCC
Confidence 568999999998888888876443 221 112235678899999999998888877653 3455777888999
Q ss_pred CeeeccCCCCHH
Q psy8190 170 DYYNHNLDTSPK 181 (348)
Q Consensus 170 ~~i~~g~et~~e 181 (348)
+++.|+.-.+++
T Consensus 242 ~~i~H~~~~~~~ 253 (403)
T 3gnh_A 242 DTIEHASLVDDE 253 (403)
T ss_dssp SEEEECTTCCHH
T ss_pred CEEecCCcCCHH
Confidence 988887644443
No 84
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=90.71 E-value=3.8 Score=34.65 Aligned_cols=163 Identities=10% Similarity=0.030 Sum_probs=97.2
Q ss_pred cccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 96 KILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 96 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
+..++++.+..++.+.+.|++.+-+.-- ++ .-.+.++.+++. ++.+.+ ...++.+.++...++|.+.+-
T Consensus 20 r~~~~~~a~~~a~al~~gGi~~iEvt~~--t~------~a~~~I~~l~~~~p~~~IGA-GTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 20 VIDDLVHAIPMAKALVAGGVHLLEVTLR--TE------AGLAAISAIKKAVPEAIVGA-GTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp CCSCGGGHHHHHHHHHHTTCCEEEEETT--ST------THHHHHHHHHHHCTTSEEEE-ECCCSHHHHHHHHHHTCSEEE
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEEeCC--Cc------cHHHHHHHHHHHCCCCeEee-ccccCHHHHHHHHHcCCCEEE
Confidence 4467899999999999999998877432 22 233555555553 343432 236799999999999998663
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCC------eeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccccc
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGI------NICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLV 247 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~------~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~ 247 (348)
+...++ +.++.+++.|+ .+-.+ . -|++++... .+++ .+.+.+++
T Consensus 91 -sP~~~~----------------evi~~~~~~~v~~~~~~~~~PG----~-~TptE~~~A----~~~G--ad~vK~FP-- 140 (217)
T 3lab_A 91 -SPGLTP----------------ELIEKAKQVKLDGQWQGVFLPG----V-ATASEVMIA----AQAG--ITQLKCFP-- 140 (217)
T ss_dssp -ESSCCH----------------HHHHHHHHHHHHCSCCCEEEEE----E-CSHHHHHHH----HHTT--CCEEEETT--
T ss_pred -eCCCcH----------------HHHHHHHHcCCCccCCCeEeCC----C-CCHHHHHHH----HHcC--CCEEEECc--
Confidence 221122 44567777777 55444 3 477766544 5677 78887642
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 248 QIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 248 P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
...+ .. ...+...+-.+|+..+-..+|- + .+.....+.+|+.....|..+
T Consensus 141 ---a~~~------gG---~~~lkal~~p~p~i~~~ptGGI-~--~~N~~~~l~aGa~~~vgGs~l 190 (217)
T 3lab_A 141 ---ASAI------GG---AKLLKAWSGPFPDIQFCPTGGI-S--KDNYKEYLGLPNVICAGGSWL 190 (217)
T ss_dssp ---TTTT------TH---HHHHHHHHTTCTTCEEEEBSSC-C--TTTHHHHHHSTTBCCEEESGG
T ss_pred ---cccc------cC---HHHHHHHHhhhcCceEEEeCCC-C--HHHHHHHHHCCCEEEEEChhh
Confidence 2211 11 2455555666776544333332 2 233344578888666555433
No 85
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=90.52 E-value=10 Score=34.57 Aligned_cols=146 Identities=13% Similarity=0.177 Sum_probs=87.7
Q ss_pred ccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCee
Q psy8190 130 RDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINI 209 (348)
Q Consensus 130 ~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i 209 (348)
.+.+++.++.+..++.|+.+..++ ++.+.++.|.+.|++.+-++--. + +.+..++.+.+.|.++
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~--fD~~svd~l~~~~v~~~KI~S~~---~-----------~N~pLL~~va~~gKPv 138 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTP--FDEESVDLIEAHGIEIIKIASCS---F-----------TDWPLLERIARSDKPV 138 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEE--CSHHHHHHHHHTTCCEEEECSSS---T-----------TCHHHHHHHHTSCSCE
T ss_pred CCHHHHHHHHHHHHHcCCcEEecc--CCHHHHHHHHHcCCCEEEECccc---c-----------cCHHHHHHHHhhCCcE
Confidence 345667777777777898886655 78888999999999988765321 0 1122344555567664
Q ss_pred eEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc
Q psy8190 210 CCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE 289 (348)
Q Consensus 210 ~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~ 289 (348)
- +--|+. |.+++...++++.+-+ .+.+-++...-+| || ..+-.+..+...+..+|+..|-.|. |.
T Consensus 139 i--LstGms-tl~Ei~~Ave~i~~~g--~~viLlhC~s~YP-t~-------~~~~nL~aI~~Lk~~fp~lpVG~Sd--Ht 203 (350)
T 3g8r_A 139 V--ASTAGA-RREDIDKVVSFMLHRG--KDLTIMHCVAEYP-TP-------DDHLHLARIKTLRQQYAGVRIGYST--HE 203 (350)
T ss_dssp E--EECTTC-CHHHHHHHHHHHHTTT--CCEEEEECCCCSS-CC-------GGGCCTTHHHHHHHHCTTSEEEEEE--CC
T ss_pred E--EECCCC-CHHHHHHHHHHHHHcC--CCEEEEecCCCCC-CC-------cccCCHHHHHHHHHHCCCCCEEcCC--CC
Confidence 2 123444 9999999999998876 3322222211111 12 1222355667777778765454442 44
Q ss_pred cc--hhhHHHHHHhCccee
Q psy8190 290 MG--ETTQAFCFLAGANSI 306 (348)
Q Consensus 290 l~--~~~~~~~l~~GAn~~ 306 (348)
.+ ......|+.+||..+
T Consensus 204 ~g~~~~~~~AAvAlGA~vI 222 (350)
T 3g8r_A 204 DPDLMEPIMLAVAQGATVF 222 (350)
T ss_dssp CSSCCHHHHHHHHTTCCEE
T ss_pred CCCccHHHHHHHHcCCCEE
Confidence 32 123456889999855
No 86
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=90.47 E-value=7.5 Score=33.04 Aligned_cols=158 Identities=9% Similarity=0.014 Sum_probs=94.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+.++.++.++.+.+.|++-|-+.-- ++ .-.+.++.+++. ++.+.... .++.+.++...++|.+.+..+
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~k--~~------~~~~~i~~l~~~~~~~~igagt-vl~~d~~~~A~~aGAd~v~~p 105 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTLR--SQ------HGLKAIQVLREQRPELCVGAGT-VLDRSMFAAVEAAGAQFVVTP 105 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEESS--ST------HHHHHHHHHHHHCTTSEEEEEC-CCSHHHHHHHHHHTCSSEECS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecC--Cc------cHHHHHHHHHHhCcccEEeeCe-EeeHHHHHHHHHCCCCEEEeC
Confidence 35677888888899999998877522 21 123445555442 34444333 578899999999999998754
Q ss_pred CCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCC
Q psy8190 176 LDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLY 255 (348)
Q Consensus 176 ~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~ 255 (348)
+++. +.++.+++.|... +.| -.|+++... +.+.+ .+.+.+++
T Consensus 106 -~~d~----------------~v~~~~~~~g~~~----i~G-~~t~~e~~~----A~~~G--ad~vk~FP---------- 147 (225)
T 1mxs_A 106 -GITE----------------DILEAGVDSEIPL----LPG-ISTPSEIMM----GYALG--YRRFKLFP---------- 147 (225)
T ss_dssp -SCCH----------------HHHHHHHHCSSCE----ECE-ECSHHHHHH----HHTTT--CCEEEETT----------
T ss_pred -CCCH----------------HHHHHHHHhCCCE----EEe-eCCHHHHHH----HHHCC--CCEEEEcc----------
Confidence 3332 4566677777643 445 356666533 44677 88888733
Q ss_pred CCCCCCHHHH--HHHHHHHHHHCCCCceeccccccccchhhHHHHHH-hCcceeeeCCee
Q psy8190 256 GSSILDPLEF--IRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFL-AGANSIFYGDKL 312 (348)
Q Consensus 256 ~~~~~~~~~~--~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~-~GAn~~~~~~~~ 312 (348)
.... ...+...+-.+|+..+-..+|- + .+.....+. +||+.+. +..+
T Consensus 148 ------a~~~~G~~~lk~i~~~~~~ipvvaiGGI-~--~~N~~~~l~~~Ga~~v~-gSai 197 (225)
T 1mxs_A 148 ------AEISGGVAAIKAFGGPFGDIRFCPTGGV-N--PANVRNYMALPNVMCVG-TTWM 197 (225)
T ss_dssp ------HHHHTHHHHHHHHHTTTTTCEEEEBSSC-C--TTTHHHHHHSTTBCCEE-ECTT
T ss_pred ------CccccCHHHHHHHHhhCCCCeEEEECCC-C--HHHHHHHHhccCCEEEE-Echh
Confidence 1111 3455556666775444333432 1 222333567 6899986 5433
No 87
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=90.06 E-value=2.4 Score=35.63 Aligned_cols=194 Identities=13% Similarity=0.112 Sum_probs=93.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEec--cCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCCCH-HHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGA--AWRELKDRDLDNIENMICEVKKI-GLETCLTLGMLNE-NQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~g--g~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~-e~l~~Lk~aG~~~i~ 173 (348)
.++..+.+.++.+.+.|++.+.+.- |...+ .. ..-.++++.+++. +..+.+....-+. +.++.+.++|++.+.
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~-~~--~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~ 89 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQFVP-NI--SFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMT 89 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS-CB--CBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCCCCC-cc--ccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEE
Confidence 3445666667777788988866543 31111 11 1114566666653 5555554443333 357999999999998
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP 253 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~ 253 (348)
+..+.. +...+.++.+++.|..+...+ ...|..+. +..+....+.+-+....|--++.
T Consensus 90 vh~~~~-------------~~~~~~~~~~~~~g~~i~~~~---~~~t~~e~------~~~~~~~~d~vl~~~~~~g~~g~ 147 (220)
T 2fli_A 90 IHTEST-------------RHIHGALQKIKAAGMKAGVVI---NPGTPATA------LEPLLDLVDQVLIMTVNPGFGGQ 147 (220)
T ss_dssp EEGGGC-------------SCHHHHHHHHHHTTSEEEEEE---CTTSCGGG------GGGGTTTCSEEEEESSCTTCSSC
T ss_pred EccCcc-------------ccHHHHHHHHHHcCCcEEEEE---cCCCCHHH------HHHHHhhCCEEEEEEECCCCccc
Confidence 654321 112244566667786654332 12333332 22222124555433343322221
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCC----CCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCchHHHHHH
Q psy8190 254 LYGSSILDPLEFIRTIAVARITMP----TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLL 327 (348)
Q Consensus 254 l~~~~~~~~~~~~~~~a~~R~~lp----~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i 327 (348)
. .. ++. ++.+...|...+ +..+-+.+|-. ++....+..+||+.+..|..+... ..+.+..+.+
T Consensus 148 ~--~~-~~~---~~~i~~~~~~~~~~~~~~~i~v~GGI~---~~~~~~~~~~Gad~vvvGsai~~~--~d~~~a~~~~ 214 (220)
T 2fli_A 148 A--FI-PEC---LEKVATVAKWRDEKGLSFDIEVDGGVD---NKTIRACYEAGANVFVAGSYLFKA--SDLVSQVQTL 214 (220)
T ss_dssp C--CC-GGG---HHHHHHHHHHHHHTTCCCEEEEESSCC---TTTHHHHHHHTCCEEEESHHHHTS--SCHHHHHHHH
T ss_pred c--cC-HHH---HHHHHHHHHHHHhcCCCceEEEECcCC---HHHHHHHHHcCCCEEEEChHHhCC--CCHHHHHHHH
Confidence 1 11 221 222233333222 33344455421 222334678899999888655322 3344444433
No 88
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=89.98 E-value=11 Score=34.39 Aligned_cols=154 Identities=19% Similarity=0.235 Sum_probs=88.1
Q ss_pred cHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHc-CCe
Q psy8190 131 DLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV-GIN 208 (348)
Q Consensus 131 ~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~-G~~ 208 (348)
+.+...+.++++++. ...+.++.+.-+.+.++.+.++|++.|.++... + ..+.+.+.++.+++. +++
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~----------G-~~~~~~~~i~~i~~~~~~~ 147 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAH----------G-HSLNIIRTLKEIKSKMNID 147 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSC----------C-SBHHHHHHHHHHHHHCCCE
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCC----------C-CcHHHHHHHHHHHHhcCCc
Confidence 557788888888864 456666766555899999999999998765321 1 235667778887775 665
Q ss_pred eeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCC-----CCCCCCCHHHHHHHHHHHHHHCCCCceec
Q psy8190 209 ICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPL-----YGSSILDPLEFIRTIAVARITMPTSRIRM 283 (348)
Q Consensus 209 i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l-----~~~~~~~~~~~~~~~a~~R~~lp~~~i~~ 283 (348)
+.. |-..|.++ ++.+.+.+ .+.+.+. . .||+.- .....++...+..+...++.. +..|-+
T Consensus 148 Viv----g~v~t~e~----A~~l~~aG--aD~I~VG-~--~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVIA 212 (361)
T 3khj_A 148 VIV----GNVVTEEA----TKELIENG--ADGIKVG-I--GPGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPIIA 212 (361)
T ss_dssp EEE----EEECSHHH----HHHHHHTT--CSEEEEC-S--SCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHH--TCCEEE
T ss_pred EEE----ccCCCHHH----HHHHHHcC--cCEEEEe-c--CCCcCCCcccccCCCCCcHHHHHHHHHHHhhc--CCeEEE
Confidence 543 33345544 45566777 8888762 1 233211 011123333223332222221 222333
Q ss_pred cccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 284 SAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 284 s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
++|-.+ ......++.+||+.++.|..+
T Consensus 213 ~GGI~~--~~di~kala~GAd~V~vGs~~ 239 (361)
T 3khj_A 213 DGGIRY--SGDIGKALAVGASSVMIGSIL 239 (361)
T ss_dssp ESCCCS--HHHHHHHHHHTCSEEEESTTT
T ss_pred ECCCCC--HHHHHHHHHcCCCEEEEChhh
Confidence 443222 233455788999999877543
No 89
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=89.64 E-value=8.9 Score=32.69 Aligned_cols=183 Identities=15% Similarity=0.093 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc----------------ccHHHHHHHHHHHHhc-CcEEEEecCCCC----
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD----------------RDLDNIENMICEVKKI-GLETCLTLGMLN---- 157 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~----------------~~~~~~~~l~~~i~~~-~~~i~~~~g~l~---- 157 (348)
+.++..+.++.+.+. ++.+.++--..+|.. .+.....++++.+++. ++++.+-.+.-+
T Consensus 17 ~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~ 95 (248)
T 1geq_A 17 DKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRA 95 (248)
T ss_dssp CHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhc
Confidence 346888888888777 888888721111100 0345567888888874 455544332112
Q ss_pred --HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhc
Q psy8190 158 --ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANL 234 (348)
Q Consensus 158 --~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l 234 (348)
.+.++.+.++|++.+.++-... ++..+.++.+++.|..+ ++++ ..|..+..+.+.. .
T Consensus 96 ~~~~~~~~~~~~Gad~v~~~~~~~-------------~~~~~~~~~~~~~g~~~----~~~i~~~t~~e~~~~~~~---~ 155 (248)
T 1geq_A 96 GVRNFLAEAKASGVDGILVVDLPV-------------FHAKEFTEIAREEGIKT----VFLAAPNTPDERLKVIDD---M 155 (248)
T ss_dssp CHHHHHHHHHHHTCCEEEETTCCG-------------GGHHHHHHHHHHHTCEE----EEEECTTCCHHHHHHHHH---H
T ss_pred CHHHHHHHHHHCCCCEEEECCCCh-------------hhHHHHHHHHHHhCCCe----EEEECCCCHHHHHHHHHh---c
Confidence 5789999999999999864331 12335577777888764 3455 4465555444322 2
Q ss_pred CCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 235 NPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 235 ~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
. ...+.+ +..+|+- ....... ...++.+...|... +..+.+++|-.. .+.....+.+||+.++.|..+
T Consensus 156 ~--d~~i~~---~~~~G~~-g~~~~~~-~~~~~~i~~l~~~~-~~pi~~~GGI~~--~e~i~~~~~~Gad~vivGsai 223 (248)
T 1geq_A 156 T--TGFVYL---VSLYGTT-GAREEIP-KTAYDLLRRAKRIC-RNKVAVGFGVSK--REHVVSLLKEGANGVVVGSAL 223 (248)
T ss_dssp C--SSEEEE---ECCC--------CCC-HHHHHHHHHHHHHC-SSCEEEESCCCS--HHHHHHHHHTTCSEEEECHHH
T ss_pred C--CCeEEE---EECCccC-CCCCCCC-hhHHHHHHHHHhhc-CCCEEEEeecCC--HHHHHHHHHcCCCEEEEcHHH
Confidence 2 113322 2224421 1111111 23344445555444 333444444211 133334568999999887643
No 90
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=89.43 E-value=4.6 Score=34.16 Aligned_cols=182 Identities=13% Similarity=0.107 Sum_probs=91.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEe--ccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCC-CHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMG--AAWRELKDRDLDNIENMICEVKKI-GLETCLTLGML-NENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~--gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l-~~e~l~~Lk~aG~~~i~ 173 (348)
.+++...+.++.+.+.|++.+.+. .|...+. .. .-.++++.+++. +..+.+..-.- +.+.++.+.++|++.+.
T Consensus 20 ~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~-~~--~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~ 96 (230)
T 1rpx_A 20 ANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPN-IT--IGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVS 96 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSC-BC--CCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeccCCcccc-cc--cCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEE
Confidence 445666777777778898877665 3322121 11 124666667653 33332222222 33578899999999998
Q ss_pred ccCC--CCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCC
Q psy8190 174 HNLD--TSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKG 251 (348)
Q Consensus 174 ~g~e--t~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~g 251 (348)
+..+ .. +...+.++.+++.|+.+...+. ..|..+..+ .+....+.+-+..+.|--+
T Consensus 97 vh~~~~~~-------------~~~~~~~~~~~~~g~~ig~~~~---p~t~~e~~~------~~~~~~d~vl~~~~~pg~~ 154 (230)
T 1rpx_A 97 VHCEQSST-------------IHLHRTINQIKSLGAKAGVVLN---PGTPLTAIE------YVLDAVDLVLIMSVNPGFG 154 (230)
T ss_dssp EECSTTTC-------------SCHHHHHHHHHHTTSEEEEEEC---TTCCGGGGT------TTTTTCSEEEEESSCTTCS
T ss_pred EEecCccc-------------hhHHHHHHHHHHcCCcEEEEeC---CCCCHHHHH------HHHhhCCEEEEEEEcCCCC
Confidence 7664 32 1123456667777876544432 223333221 2211256664444443211
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCC----CCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 252 TPLYGSSILDPLEFIRTIAVARITMP----TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 252 T~l~~~~~~~~~~~~~~~a~~R~~lp----~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
++ .. .++. ++.+...|...+ +..+-+.+|- +++....++.+||+.+..|..+.
T Consensus 155 g~--~~-~~~~---~~~i~~l~~~~~~~~~~~pi~v~GGI---~~~n~~~~~~aGad~vvvgSaI~ 211 (230)
T 1rpx_A 155 GQ--SF-IESQ---VKKISDLRKICAERGLNPWIEVDGGV---GPKNAYKVIEAGANALVAGSAVF 211 (230)
T ss_dssp SC--CC-CTTH---HHHHHHHHHHHHHHTCCCEEEEESSC---CTTTHHHHHHHTCCEEEESHHHH
T ss_pred Cc--cc-cHHH---HHHHHHHHHHHHhcCCCceEEEECCC---CHHHHHHHHHcCCCEEEEChhhh
Confidence 11 11 1222 233333343332 3233344432 22333347888999998886553
No 91
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=89.25 E-value=11 Score=33.35 Aligned_cols=193 Identities=10% Similarity=0.044 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHH-hc--CcEEEEecCCCCH----HHHHHHHHhCCC-eeeccCCCCHHHHhccCC-CCCHHHHHHHHHHH
Q psy8190 132 LDNIENMICEVK-KI--GLETCLTLGMLNE----NQAYRLKKVGLD-YYNHNLDTSPKLYGDIIS-TRDYENRLNTLKNV 202 (348)
Q Consensus 132 ~~~~~~l~~~i~-~~--~~~i~~~~g~l~~----e~l~~Lk~aG~~-~i~~g~et~~e~l~~i~~-~~~~~~~~~~i~~~ 202 (348)
.+.+.+.++..+ .. +..+.++.+..+. +.++.+.++|+| .|.+++-+ |.. +.-.. +.+.+...+.++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~-P~~-~g~~~~g~~~e~~~~iv~~v 153 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSC-PNV-PGEPQLAYDFEATEKLLKEV 153 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCC-CCS-SSCCCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccC-CCC-CCcccccCCHHHHHHHHHHH
Confidence 455555555544 23 4556666554443 346677788999 88887754 111 11100 23778888888888
Q ss_pred HHc-CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccc-----c--CCCCCCC-------C-CCCCHHHHH
Q psy8190 203 RNV-GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ-----I--KGTPLYG-------S-SILDPLEFI 266 (348)
Q Consensus 203 ~~~-G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P-----~--~gT~l~~-------~-~~~~~~~~~ 266 (348)
++. ++++..-+- .+-+.+++.+.++.+.+.+ ++.+.+....+ . .+++... . .++.....+
T Consensus 154 r~~~~~Pv~vKi~--~~~~~~~~~~~a~~~~~~G--~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~ 229 (311)
T 1jub_A 154 FTFFTKPLGVKLP--PYFDLVHFDIMAEILNQFP--LTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL 229 (311)
T ss_dssp TTTCCSCEEEEEC--CCCSHHHHHHHHHHHTTSC--CCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH
T ss_pred HHhcCCCEEEEEC--CCCCHHHHHHHHHHHHHcC--CcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH
Confidence 875 555544322 2336777777788888887 78776654321 1 1111110 0 111122334
Q ss_pred HHHHHHHHHCC-CCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCC-c----hHHHHHHHHcCCC
Q psy8190 267 RTIAVARITMP-TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTK-T----NDDSKLLKKLGIN 333 (348)
Q Consensus 267 ~~~a~~R~~lp-~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~-~----~~~~~~i~~~G~~ 333 (348)
.++...+..++ +..|-..+|-.+ .+.....+.+||+.++.|.-+.. .|+. . ++..+.+.+.|+.
T Consensus 230 ~~i~~v~~~~~~~ipvi~~GGI~~--~~da~~~l~~GAd~V~vg~~~l~-~~p~~~~~i~~~l~~~l~~~g~~ 299 (311)
T 1jub_A 230 ANVRAFYTRLKPEIQIIGTGGIET--GQDAFEHLLCGATMLQIGTALHK-EGPAIFDRIIKELEEIMNQKGYQ 299 (311)
T ss_dssp HHHHHHHTTSCTTSEEEEESSCCS--HHHHHHHHHHTCSEEEECHHHHH-HCTHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCCCCEEEECCCCC--HHHHHHHHHcCCCEEEEchHHHh-cCcHHHHHHHHHHHHHHHHcCCC
Confidence 55555555454 333333343222 33445567899999977643321 2332 1 3556777888886
No 92
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=89.19 E-value=14 Score=34.19 Aligned_cols=186 Identities=13% Similarity=0.084 Sum_probs=104.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccC--CCCC---cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAW--RELK---DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~--~~~~---~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
+.+...+.++.+++.|+.-|.++.-. +++. ....+.+..+.+..++.|+.+.+++ .+.+.++.+.+. ++.+.
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~--~d~~~~~~l~~~-vd~lk 230 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEI--VTPADIEVALDY-VDVIQ 230 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC--CSGGGHHHHTTT-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEec--CCHHHHHHHHhh-CCEEE
Confidence 68889999999999999987776531 1111 1345666555555556788886544 666777788777 88887
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeec-cc-ccccCC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPI-NN-LVQIKG 251 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~-~~-l~P~~g 251 (348)
++--.. .+ ...++.+.+.|.+|. +--|+.-|.+++...++.+.+-+ ...+.+ .. ..-+|.
T Consensus 231 Igs~~~----------~n----~~LL~~~a~~gkPVi--lk~G~~~t~~e~~~Ave~i~~~G--n~~i~L~~rG~s~yp~ 292 (385)
T 3nvt_A 231 IGARNM----------QN----FELLKAAGRVDKPIL--LKRGLSATIEEFIGAAEYIMSQG--NGKIILCERGIRTYEK 292 (385)
T ss_dssp ECGGGT----------TC----HHHHHHHHTSSSCEE--EECCTTCCHHHHHHHHHHHHTTT--CCCEEEEECCBCCSCC
T ss_pred ECcccc----------cC----HHHHHHHHccCCcEE--EecCCCCCHHHHHHHHHHHHHcC--CCeEEEEECCCCCCCC
Confidence 754221 01 133455556666652 23455569999999999998877 333322 21 111221
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCcee-cc--ccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 252 TPLYGSSILDPLEFIRTIAVARITMPTSRIR-MS--AGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 252 T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~-~s--~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.+.... .+..+...+..+.-..+. .+ .|+..+-......|+.+||++++.+..+
T Consensus 293 ~~~~~l-------dl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~ 349 (385)
T 3nvt_A 293 ATRNTL-------DISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHP 349 (385)
T ss_dssp SSSSBC-------CTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCcccc-------CHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecC
Confidence 121111 122333344332111121 11 2222222345677899999998776543
No 93
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=88.75 E-value=2.9 Score=36.25 Aligned_cols=122 Identities=10% Similarity=0.105 Sum_probs=75.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEe--cC-CCC-HHHHHHHHHhCCCeeec
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLT--LG-MLN-ENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~--~g-~l~-~e~l~~Lk~aG~~~i~~ 174 (348)
..+.+.+.++.+++.|+..|.|+--.. ....+.+.+.++++... +++++.+ .. ..+ .+-++.|.+.|++||.-
T Consensus 71 E~~~M~~Di~~~~~~GadGvV~G~Lt~-dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILT 147 (256)
T 1twd_A 71 EFAAILEDVRTVRELGFPGLVTGVLDV-DGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGIARVLT 147 (256)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBCT-TSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeECC-CCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCCCEEEC
Confidence 456777888889999999999965422 23468888999987766 5666654 22 122 45689999999999873
Q ss_pred -cCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 175 -NLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 175 -g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
|-+. +..+-++.++.+.+ ++ ...+|.|-|=+.+.+.+.+ ..+ +..+.++
T Consensus 148 SG~~~------------~a~~g~~~L~~Lv~~a~---~i~Im~GgGv~~~Ni~~l~----~tG--v~e~H~S 198 (256)
T 1twd_A 148 SGQKS------------DALQGLSKIMELIAHRD---APIIMAGAGVRAENLHHFL----DAG--VLEVHSS 198 (256)
T ss_dssp CTTSS------------STTTTHHHHHHHHTSSS---CCEEEEESSCCTTTHHHHH----HHT--CSEEEEC
T ss_pred CCCCC------------CHHHHHHHHHHHHHhhC---CcEEEecCCcCHHHHHHHH----HcC--CCeEeEC
Confidence 2211 12222334444433 34 5577887766555554432 345 5555544
No 94
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=88.34 E-value=9.7 Score=31.41 Aligned_cols=175 Identities=17% Similarity=0.099 Sum_probs=95.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCC-HH-HHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLN-EN-QAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~-~e-~l~~Lk~aG~~~i~ 173 (348)
.+.++.++.++.+.. |+..+.++.+. ....=.++++.+++. +..+.+..+..+ .+ .++.+.++|++.+.
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~------~~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~ 82 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPL------IKAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVT 82 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHH------HHHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHH------HHhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEE
Confidence 467888888888776 88888774431 012223456666653 556554433334 44 48899999999998
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCee-eccccccc-CC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESV-PINNLVQI-KG 251 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i-~~~~l~P~-~g 251 (348)
+..+..++ ...++++.+++.|..+...+ .. -.|+++..+.+ .+.+ .+.+ .+..+.|. .|
T Consensus 83 vh~~~~~~------------~~~~~~~~~~~~g~~~gv~~-~s-~~~p~~~~~~~---~~~g--~d~v~~~~~~~~~~~g 143 (207)
T 3ajx_A 83 VLGSADDS------------TIAGAVKAAQAHNKGVVVDL-IG-IEDKATRAQEV---RALG--AKFVEMHAGLDEQAKP 143 (207)
T ss_dssp EETTSCHH------------HHHHHHHHHHHHTCEEEEEC-TT-CSSHHHHHHHH---HHTT--CSEEEEECCHHHHTST
T ss_pred EeccCChH------------HHHHHHHHHHHcCCceEEEE-ec-CCChHHHHHHH---HHhC--CCEEEEEecccccccC
Confidence 65544322 23355666777788753221 11 23556544333 3455 6777 33344442 33
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 252 TPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 252 T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
.. + .. +.++ ..+-. +..+.+.+|- +.+....++.+||+.+..|..+.
T Consensus 144 ~~-----~-~~-~~i~---~~~~~--~~pi~v~GGI---~~~~~~~~~~aGad~vvvGsaI~ 190 (207)
T 3ajx_A 144 GF-----D-LN-GLLA---AGEKA--RVPFSVAGGV---KVATIPAVQKAGAEVAVAGGAIY 190 (207)
T ss_dssp TC-----C-TH-HHHH---HHHHH--TSCEEEESSC---CGGGHHHHHHTTCSEEEESHHHH
T ss_pred CC-----c-hH-HHHH---HhhCC--CCCEEEECCc---CHHHHHHHHHcCCCEEEEeeecc
Confidence 22 1 11 2222 22211 3234333432 12334556899999998886553
No 95
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=88.03 E-value=21 Score=34.83 Aligned_cols=186 Identities=17% Similarity=0.179 Sum_probs=106.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHh--CCCeeec
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKV--GLDYYNH 174 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~a--G~~~i~~ 174 (348)
.+.+++++.++...+.|..-|-++-|. +.....+.+.+++..+++. ++.+ +..+...+.++.-.++ |.+-|+
T Consensus 337 ~~~~~a~~~A~~~v~~GAdiIDIgpg~--~~v~~~ee~~rvv~~i~~~~~vpi--sIDT~~~~v~eaal~~~~G~~iIN- 411 (566)
T 1q7z_A 337 GNEEIVIKEAKTQVEKGAEVLDVNFGI--ESQIDVRYVEKIVQTLPYVSNVPL--SLDIQNVDLTERALRAYPGRSLFN- 411 (566)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECSS--GGGSCHHHHHHHHHHHHHHTCSCE--EEECCCHHHHHHHHHHCSSCCEEE-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCC--CCCCHHHHHHHHHHHHHhhCCceE--EEeCCCHHHHHHHHHhcCCCCEEE-
Confidence 467999999999999999998887441 2223556777777777653 5555 6677889999888888 887665
Q ss_pred cCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeee-cCCCHHHHHHHHH----HHHhcCCCCCeeeccccccc
Q psy8190 175 NLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIG-LSESRDQRAELIF----QLANLNPYPESVPINNLVQI 249 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~G-lget~e~~~~~l~----~l~~l~~~~~~i~~~~l~P~ 249 (348)
.+... . +...+.++.++++|..+...-+-| ..+|.+++.+.+. .+.+.+ + + ..++.-
T Consensus 412 ----------dis~~-~-~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~G--i---~-~~IilD 473 (566)
T 1q7z_A 412 ----------SAKVD-E-EELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHD--F---S-DRVIFD 473 (566)
T ss_dssp ----------EEESC-H-HHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTT--C---G-GGEEEE
T ss_pred ----------ECCcc-h-hhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCC--C---C-CcEEEe
Confidence 11111 1 333455777788888654433444 3445665555443 344444 2 2 334444
Q ss_pred CCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCce-----ecccc---ccccchhhHHHHHHhCcceeeeCC
Q psy8190 250 KGT-PLYGSSILDPLEFIRTIAVARITMPTSRI-----RMSAG---RKEMGETTQAFCFLAGANSIFYGD 310 (348)
Q Consensus 250 ~gT-~l~~~~~~~~~~~~~~~a~~R~~lp~~~i-----~~s~g---~~~l~~~~~~~~l~~GAn~~~~~~ 310 (348)
||. |+.. .. ...+.++-+...|.. +..+ +.|.+ +..+..-....++..|++.+...+
T Consensus 474 Pg~~~igf-gk-~~~~~l~~~~~~~~~--g~p~l~G~Snksf~~~~~~~l~~t~a~~a~~~G~~i~rvh~ 539 (566)
T 1q7z_A 474 PGVLPLGA-EG-KPVEVLKTIEFISSK--GFNTTVGLSNLSFGLPDRSYYNTAFLVLGISKGLSSAIMNP 539 (566)
T ss_dssp CCCCCTTT-TC-CHHHHHHHHHHHHHT--TCEECCBGGGGSTTSTTHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CCCCcccC-cH-HHHHHHHHHHHHHhC--CCCEEEEeCcccccCCHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 554 1111 11 555666666666643 2111 11111 122223344667889999886643
No 96
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=87.87 E-value=9 Score=34.26 Aligned_cols=131 Identities=10% Similarity=0.060 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCC--cccHHHHHHHHHHHHhc-CcEEEEec-CC----CCHHHHHHHHHhCCC--
Q psy8190 101 ESVITAAQKAKSDGATRFCMGAAWRELK--DRDLDNIENMICEVKKI-GLETCLTL-GM----LNENQAYRLKKVGLD-- 170 (348)
Q Consensus 101 eei~~~~~~~~~~G~~~i~l~gg~~~~~--~~~~~~~~~l~~~i~~~-~~~i~~~~-g~----l~~e~l~~Lk~aG~~-- 170 (348)
+.+.+.++...+.|+.-|-+++..+.|. ..+.+...++++.+.+. ++.+ +. ++ .+.+.++.-.++|.+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vpl--sI~DT~~~~~~~~V~eaal~aga~~k 151 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPL--MIIGCGVEEKDAEIFPVIGEALSGRN 151 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCE--EEECCSCHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceE--EEECCCCCCCCHHHHHHHHHhCCCCC
Confidence 7888888888899999999988533342 34667777788888764 6665 56 66 777888888888876
Q ss_pred -eee-ccCCCCHHHHhccC---------CCCCHHHHHHHHHHHHHcCC---eeeEeEeeec-CCCHHHHHHHHHHHHh
Q psy8190 171 -YYN-HNLDTSPKLYGDII---------STRDYENRLNTLKNVRNVGI---NICCGGIIGL-SESRDQRAELIFQLAN 233 (348)
Q Consensus 171 -~i~-~g~et~~e~l~~i~---------~~~~~~~~~~~i~~~~~~G~---~i~~~~i~Gl-get~e~~~~~l~~l~~ 233 (348)
-|+ +.-+..++++.... ...+.+...+.++.+.++|+ ++..+-.+|. |-+.+.-...+..++.
T Consensus 152 ~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~~~e~~~~~l~~ir~ 229 (310)
T 2h9a_B 152 CLLSSATKDNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIMEMNLAPNRIIMDPLIGALGYGIEYSYSIIERMRL 229 (310)
T ss_dssp CEEEEECTTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred CEEEECCCCccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHHHHHCCCChhhEEEeCCCccccCchHhHHHHHHHHHH
Confidence 232 22222255554211 11256777778888889998 4778878885 8666666566666666
No 97
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=87.80 E-value=13 Score=32.18 Aligned_cols=174 Identities=14% Similarity=0.017 Sum_probs=96.9
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHH
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPK 181 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e 181 (348)
...+.++.+.+.|+..+.+.+... ...-..+++..+-+ ..++++-..-..+++..+...+++|+|.|.++..
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~-~f~G~~~~l~~i~~---~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~---- 137 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPH-RFGGSLLDLKRVRE---AVDLPLLRKDFVVDPFMLEEARAFGASAALLIVA---- 137 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCS-SSCCCHHHHHHHHH---HCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHH----
T ss_pred CHHHHHHHHHHcCCCEEEEecchh-hhccCHHHHHHHHH---hcCCCEEECCcCCCHHHHHHHHHcCCCEEEECcc----
Confidence 345555667788999998865421 11123444444333 2467766556678888899999999999998662
Q ss_pred HHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCC
Q psy8190 182 LYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILD 261 (348)
Q Consensus 182 ~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~ 261 (348)
.+. ++..+.++.+++.|+.+-+. -.+.++. ..+.+++ ++.++++..... .+ .++
T Consensus 138 ~l~--------~~l~~l~~~a~~lGl~~lve-----v~~~~E~----~~a~~~g--ad~IGvn~~~l~---~~----~~d 191 (254)
T 1vc4_A 138 LLG--------ELTGAYLEEARRLGLEALVE-----VHTEREL----EIALEAG--AEVLGINNRDLA---TL----HIN 191 (254)
T ss_dssp HHG--------GGHHHHHHHHHHHTCEEEEE-----ECSHHHH----HHHHHHT--CSEEEEESBCTT---TC----CBC
T ss_pred chH--------HHHHHHHHHHHHCCCeEEEE-----ECCHHHH----HHHHHcC--CCEEEEccccCc---CC----CCC
Confidence 221 34556677777888765321 2344543 2455666 788888775532 12 223
Q ss_pred HHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 262 PLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 262 ~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.+...++........++..+-..+|-.+ ++.-..... ||+.++.|..+
T Consensus 192 l~~~~~L~~~i~~~~~~~~vIAegGI~s--~~dv~~l~~-Ga~gvlVGsAl 239 (254)
T 1vc4_A 192 LETAPRLGRLARKRGFGGVLVAESGYSR--KEELKALEG-LFDAVLIGTSL 239 (254)
T ss_dssp TTHHHHHHHHHHHTTCCSEEEEESCCCS--HHHHHTTTT-TCSEEEECHHH
T ss_pred HHHHHHHHHhCccccCCCeEEEEcCCCC--HHHHHHHHc-CCCEEEEeHHH
Confidence 3333333322211011222222333222 233334556 99999888755
No 98
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=87.74 E-value=1.4 Score=37.72 Aligned_cols=117 Identities=13% Similarity=0.197 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecc---------CCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCC
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAA---------WRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLD 170 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg---------~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~ 170 (348)
.+|+++.+... .-..++|+-. |-+ .....+.+.++++.+++.|+.+++-.. -+.+.++.-++.|.+
T Consensus 76 t~emi~ia~~~---kP~~vtLVPE~r~e~TTegGld-v~~~~~~l~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~GA~ 150 (243)
T 1m5w_A 76 TEEMLAIAVET---KPHFCCLVPEKRQEVTTEGGLD-VAGQRDKMRDACKRLADAGIQVSLFID-ADEEQIKAAAEVGAP 150 (243)
T ss_dssp SHHHHHHHHHH---CCSEEEECCCCSSCSSCCSCCC-SGGGHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHc---CCCEEEECCCCCCCcCCCcchh-HHhhHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCcC
Confidence 45677665544 4567777632 111 124678999999999999999877664 678999999999999
Q ss_pred eeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHH
Q psy8190 171 YYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQ 223 (348)
Q Consensus 171 ~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~ 223 (348)
+|.+--+.-.+.+........++.+.++.+.+++.|+.|+++ -|| .++...
T Consensus 151 ~IELhTG~Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~VnAG--HgL~y~Nv~~ 202 (243)
T 1m5w_A 151 FIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAG--HGLTYHNVKA 202 (243)
T ss_dssp EEEEECHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEE--SSCCTTTHHH
T ss_pred EEEEechhhhcCCCchhHHHHHHHHHHHHHHHHHcCCEEecC--CCCCHHHHHH
Confidence 998754321111110001124567778888889999999876 455 455444
No 99
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=87.62 E-value=4.5 Score=35.78 Aligned_cols=86 Identities=10% Similarity=0.171 Sum_probs=59.4
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHH--hcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK--KIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~--~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+++...++.+.+.|++.|--++|.. ....+.+.+.-+.+.++ ...+.+-++.|..+.+.+..|.++|.+|+-.
T Consensus 185 Lt~eei~~A~~ia~eaGADfVKTSTGf~-~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGt- 262 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLAGADYVKTSTGFN-GPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGA- 262 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSS-SCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEE-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCCCC-CCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeeh-
Confidence 6788888888888889999887666532 22345555433333333 2357788899999999999999999998752
Q ss_pred CCCCHHHHhcc
Q psy8190 176 LDTSPKLYGDI 186 (348)
Q Consensus 176 ~et~~e~l~~i 186 (348)
-+..++++..
T Consensus 263 -S~g~~I~~~~ 272 (288)
T 3oa3_A 263 -SAGVKIVNET 272 (288)
T ss_dssp -SCHHHHHHHH
T ss_pred -hhHHHHHHHH
Confidence 1235666654
No 100
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=87.56 E-value=1.3 Score=38.18 Aligned_cols=73 Identities=15% Similarity=0.020 Sum_probs=51.8
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 103 VITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
..+.++.+.+.|++.+++.+........ ....++++.+++ .++++.++.|..+.+.++.+.++|++.+.+|-.
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~--~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~ 110 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKS--GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTA 110 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSS--CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCC--cccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhH
Confidence 3445566677899999887642111111 112456677766 478899999999999999999999999988753
No 101
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=87.47 E-value=3 Score=38.69 Aligned_cols=83 Identities=13% Similarity=0.104 Sum_probs=57.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEE--eccCCC------CCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCM--GAAWRE------LKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l--~gg~~~------~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~ 169 (348)
-+++++.+.+++..+.|+..+-+ .|+... ....+.+.+.++++..++.++.+.++.. ..+.++...++|+
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~al~~G~ 249 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY--TPAAIARAVRCGV 249 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEEC--SHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeC--ChHHHHHHHHcCC
Confidence 46788888888877778776533 332111 1134678899999999988888777665 5566777778999
Q ss_pred CeeeccCCCCHHH
Q psy8190 170 DYYNHNLDTSPKL 182 (348)
Q Consensus 170 ~~i~~g~et~~e~ 182 (348)
+++.++.-.+++.
T Consensus 250 ~~i~H~~~~~~~~ 262 (426)
T 2r8c_A 250 RTIEHGNLIDDET 262 (426)
T ss_dssp SEEEECTTCCHHH
T ss_pred CEEecCCcCCHHH
Confidence 9888765444443
No 102
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=87.43 E-value=17 Score=33.07 Aligned_cols=141 Identities=16% Similarity=0.117 Sum_probs=79.8
Q ss_pred HHHHHHHhCCCeeeccCCC-CHHHHhc-cCC--CCCHHHHHHHHHHHHH-cCCeeeEeEeeec--CCCHHHHHHHHHHHH
Q psy8190 160 QAYRLKKVGLDYYNHNLDT-SPKLYGD-IIS--TRDYENRLNTLKNVRN-VGINICCGGIIGL--SESRDQRAELIFQLA 232 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~et-~~e~l~~-i~~--~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl--get~e~~~~~l~~l~ 232 (348)
.++.+.++|+|.|.+++.+ ...+.+. .+. ....+...+.++.+++ .++++.+-+-.|. ..+.++..+.+..+.
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~ 154 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMA 154 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHH
Confidence 4556677899999998876 4444332 111 1356777788888777 4777766544566 345667888888888
Q ss_pred hcCCCCCeeecccccccCC-CCCC--CCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeC
Q psy8190 233 NLNPYPESVPINNLVQIKG-TPLY--GSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYG 309 (348)
Q Consensus 233 ~l~~~~~~i~~~~l~P~~g-T~l~--~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~ 309 (348)
+.+ ++.+.++.-....| ++-. ..++.+ +..+...+..+|+..|-+.+|-.+ .+.....+. ||+.++.|
T Consensus 155 ~aG--~d~I~V~~r~~~~g~~g~~~~~~~~~~----~~~i~~ik~~~~~iPVianGgI~s--~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 155 EAG--VKVFVVHARSALLALSTKANREIPPLR----HDWVHRLKGDFPQLTFVTNGGIRS--LEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp HTT--CCEEEEECSCBC----------CCCCC----HHHHHHHHHHCTTSEEEEESSCCS--HHHHHHHHT-TSSEEEEC
T ss_pred HcC--CCEEEEecCchhcccCcccccCCCccc----HHHHHHHHHhCCCCeEEEECCcCC--HHHHHHHHh-CCCEEEEC
Confidence 888 88887764332111 0000 011222 233444444555544444443222 233334454 99999776
No 103
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=87.43 E-value=4.9 Score=34.97 Aligned_cols=75 Identities=17% Similarity=0.116 Sum_probs=53.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
.++.+++...++.+.+.|+..|--++|. .+...+++.+.-+.+.+ ...+.+-++.|..+.+.+..|.++|.+|+-
T Consensus 169 ~Lt~eei~~A~~ia~eaGADfVKTSTGf-~~~GAT~edV~lm~~~v-g~~v~VKaAGGIrt~~~al~mi~aGA~RiG 243 (260)
T 3r12_A 169 YLDTEEKIAACVISKLAGAHFVKTSTGF-GTGGATAEDVHLMKWIV-GDEMGVKASGGIRTFEDAVKMIMYGADRIG 243 (260)
T ss_dssp GCCHHHHHHHHHHHHHTTCSEEECCCSS-SSCCCCHHHHHHHHHHH-CTTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHhCcCEEEcCCCC-CCCCCCHHHHHHHHHHh-CCCceEEEeCCCCCHHHHHHHHHcCCceee
Confidence 3678888888888888899888776663 22234455544443333 345778888999999999999999999875
No 104
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=87.42 E-value=0.94 Score=39.21 Aligned_cols=176 Identities=12% Similarity=0.142 Sum_probs=95.5
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC--CH
Q psy8190 104 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT--SP 180 (348)
Q Consensus 104 ~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et--~~ 180 (348)
++.++...+.|++++++..-+.. ........++++.+.+ ..+++++-.|..+.+.++.+-++|++++.++-.. ++
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a--~~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p 111 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGA--KDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDA 111 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHH--HCGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCH
T ss_pred HHHHHHHHHCCCCEEEEEecCcc--cccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCC
Confidence 33455667789999988753100 1111223456666654 5889999999999999999999999999987554 24
Q ss_pred HHHhccCCCCCHHHHHHHHHHHHHcC---CeeeEeEe------eec----CCCHHHHHHHHHHHHhcCCCCCeeeccccc
Q psy8190 181 KLYGDIISTRDYENRLNTLKNVRNVG---INICCGGI------IGL----SESRDQRAELIFQLANLNPYPESVPINNLV 247 (348)
Q Consensus 181 e~l~~i~~~~~~~~~~~~i~~~~~~G---~~i~~~~i------~Gl----get~e~~~~~l~~l~~l~~~~~~i~~~~l~ 247 (348)
++.+ +. +++.| +-++.+.. +-. ..|.-+..+.+..+.+++ ...+-+.. +
T Consensus 112 ~li~------------e~---~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g--~~eil~t~-I 173 (243)
T 4gj1_A 112 TLCL------------EI---LKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKG--LKHILCTD-I 173 (243)
T ss_dssp HHHH------------HH---HHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTT--CCEEEEEE-T
T ss_pred chHH------------HH---HhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcC--CcEEEeee-e
Confidence 4432 22 33334 22333321 111 122234566667777776 56654433 3
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCC
Q psy8190 248 QIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGD 310 (348)
Q Consensus 248 P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~ 310 (348)
-..||- ..++.+ ++...+...|+..+-+++|-.++ .+.. .+..+++.++.|.
T Consensus 174 d~DGt~----~G~d~~----l~~~l~~~~~~ipviasGGv~~~-~Dl~--~l~~~~~gvivg~ 225 (243)
T 4gj1_A 174 SKDGTM----QGVNVR----LYKLIHEIFPNICIQASGGVASL-KDLE--NLKGICSGVIVGK 225 (243)
T ss_dssp TC---------CCCHH----HHHHHHHHCTTSEEEEESCCCSH-HHHH--HTTTTCSEEEECH
T ss_pred cccccc----cCCCHH----HHHHHHHhcCCCCEEEEcCCCCH-HHHH--HHHccCchhehHH
Confidence 345663 233433 33333444666555566664343 2222 3466777776553
No 105
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=87.41 E-value=13 Score=31.90 Aligned_cols=167 Identities=11% Similarity=-0.028 Sum_probs=88.4
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCC----CcccHHHHHHHHHHHHh----cCcEEEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 103 VITAAQKAKSDGATRFCMGAAWREL----KDRDLDNIENMICEVKK----IGLETCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~~~~----~~~~~~~~~~l~~~i~~----~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
+.+.++.+.+.|++.|.+-.-..+. ...+...+.++.+.+++ .++.+.+|- .++...++|.+.|.+
T Consensus 45 ~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd------~~~lA~~~gAdGVHL 118 (243)
T 3o63_A 45 LAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVND------RADIARAAGADVLHL 118 (243)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEES------CHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeC------HHHHHHHhCCCEEEe
Confidence 4455555667899998884331000 00234455555555543 578887763 245577889999998
Q ss_pred cCCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCC
Q psy8190 175 NLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGT 252 (348)
Q Consensus 175 g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT 252 (348)
+.+. .....+ .+ .| .+.++|. -.|.++... +.+.+ ++.+.+.++.|.+..
T Consensus 119 g~~dl~~~~~r----------------~~--~~----~~~~iG~S~ht~~Ea~~----A~~~G--aDyI~vgpvf~T~tK 170 (243)
T 3o63_A 119 GQRDLPVNVAR----------------QI--LA----PDTLIGRSTHDPDQVAA----AAAGD--ADYFCVGPCWPTPTK 170 (243)
T ss_dssp CTTSSCHHHHH----------------HH--SC----TTCEEEEEECSHHHHHH----HHHSS--CSEEEECCSSCCCC-
T ss_pred cCCcCCHHHHH----------------Hh--hC----CCCEEEEeCCCHHHHHH----HhhCC--CCEEEEcCccCCCCC
Confidence 7654 222111 11 11 2346666 678776443 34466 899999887765433
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCC-CCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 253 PLYGSSILDPLEFIRTIAVARITMP-TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 253 ~l~~~~~~~~~~~~~~~a~~R~~lp-~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
+.. ++.+.+.+.++ +...+ +..+-+-+|- ..+.....+.+||+.+..+..+
T Consensus 171 ~~~--~~~gl~~l~~~----~~~~~~~iPvvAiGGI---~~~ni~~~~~aGa~gvav~sai 222 (243)
T 3o63_A 171 PGR--AAPGLGLVRVA----AELGGDDKPWFAIGGI---NAQRLPAVLDAGARRIVVVRAI 222 (243)
T ss_dssp ------CCCHHHHHHH----HTC---CCCEEEESSC---CTTTHHHHHHTTCCCEEESHHH
T ss_pred CCc--chhhHHHHHHH----HHhccCCCCEEEecCC---CHHHHHHHHHcCCCEEEEeHHH
Confidence 321 23343322222 21121 2222222332 2333455788999999777644
No 106
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=87.11 E-value=14 Score=31.98 Aligned_cols=184 Identities=13% Similarity=0.121 Sum_probs=99.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc----------------ccHHHHHHHHHHHHhc--CcEEEEecCCCC---
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD----------------RDLDNIENMICEVKKI--GLETCLTLGMLN--- 157 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~----------------~~~~~~~~l~~~i~~~--~~~i~~~~g~l~--- 157 (348)
+.++.++.++.+.+.|++.|-++.-..+|.. ...+.+.++++.+++. ++++.+- +..+
T Consensus 29 ~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m-~y~n~v~ 107 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM-TYYNPIF 107 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE-CCHHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE-ecCcHHH
Confidence 3466777788888899999888543212110 1234567788888874 5666552 1111
Q ss_pred ----HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHh
Q psy8190 158 ----ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLAN 233 (348)
Q Consensus 158 ----~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~ 233 (348)
+..++.++++|++.+.+. ....++..+.++.++++|+.+.. ++... +.++++..+ .+
T Consensus 108 ~~g~~~f~~~~~~aG~dgvii~-------------dl~~ee~~~~~~~~~~~gl~~i~--l~~p~-t~~~rl~~i---a~ 168 (262)
T 2ekc_A 108 RIGLEKFCRLSREKGIDGFIVP-------------DLPPEEAEELKAVMKKYVLSFVP--LGAPT-STRKRIKLI---CE 168 (262)
T ss_dssp HHCHHHHHHHHHHTTCCEEECT-------------TCCHHHHHHHHHHHHHTTCEECC--EECTT-CCHHHHHHH---HH
T ss_pred HhhHHHHHHHHHHcCCCEEEEC-------------CCCHHHHHHHHHHHHHcCCcEEE--EeCCC-CCHHHHHHH---HH
Confidence 467889999999987752 23357788888999999986521 22223 333333332 22
Q ss_pred cCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 234 LNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 234 l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.. ...+....+...-|+. .+.+.....+++...|... +..+-+..|-.+ ++ +...+.+|||.++.|..+
T Consensus 169 ~a--~gfiy~vs~~g~TG~~----~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t--~e-~~~~~~~gADgvIVGSai 237 (262)
T 2ekc_A 169 AA--DEMTYFVSVTGTTGAR----EKLPYERIKKKVEEYRELC-DKPVVVGFGVSK--KE-HAREIGSFADGVVVGSAL 237 (262)
T ss_dssp HC--SSCEEEESSCC-------------CHHHHHHHHHHHHHC-CSCEEEESSCCS--HH-HHHHHHTTSSEEEECHHH
T ss_pred hC--CCCEEEEecCCccCCC----CCcCcccHHHHHHHHHhhc-CCCEEEeCCCCC--HH-HHHHHHcCCCEEEECHHH
Confidence 32 2222111111122221 1111144567777777765 333433332211 23 333478999999888644
No 107
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=86.62 E-value=3.4 Score=35.54 Aligned_cols=74 Identities=12% Similarity=0.102 Sum_probs=51.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
++.+++...++.+.+.|++.|--++|. .+...+++.+.-+-+.+ ...+.+-++.|..+.+.+..|.++|.+|+-
T Consensus 154 Lt~eei~~a~~ia~~aGADfVKTSTGf-~~ggAt~~dv~lmr~~v-g~~v~VKasGGIrt~~da~~~i~aGA~riG 227 (239)
T 3ngj_A 154 LTNEEKVEVCKRCVAAGAEYVKTSTGF-GTHGATPEDVKLMKDTV-GDKALVKAAGGIRTFDDAMKMINNGASRIG 227 (239)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCCSS-SSCCCCHHHHHHHHHHH-GGGSEEEEESSCCSHHHHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHHHHHHHCcCEEECCCCC-CCCCCCHHHHHHHHHhh-CCCceEEEeCCCCCHHHHHHHHHhccccee
Confidence 677888888887788888888776552 22233445544433333 345777778888888888899999998875
No 108
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=86.09 E-value=11 Score=33.41 Aligned_cols=121 Identities=12% Similarity=0.225 Sum_probs=71.7
Q ss_pred HHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC---------------CCHHHHHHHH-HhCCCee
Q psy8190 109 KAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM---------------LNENQAYRLK-KVGLDYY 172 (348)
Q Consensus 109 ~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~---------------l~~e~l~~Lk-~aG~~~i 172 (348)
.+.+.|+++|-|.|+ ..|...+.....++++..+..|+.+....|. .++|+...+. +-|+|.+
T Consensus 98 ~ai~~GFtSVMiDgS-~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~L 176 (288)
T 3q94_A 98 EAIDAGFTSVMIDAS-HHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCL 176 (288)
T ss_dssp HHHHHTCSEEEECCT-TSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEE
T ss_pred HHHHcCCCeEEEeCC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEE
Confidence 445569999988776 3333445566667777777778877765432 3456665554 6899999
Q ss_pred eccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeec
Q psy8190 173 NHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPI 243 (348)
Q Consensus 173 ~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~ 243 (348)
-+++.|.--.|+. .+..+++.. +.|+.. .++++. +-|- |-..+++.+.+ +++ +.-|.+
T Consensus 177 AvaiGt~HG~Y~~-~p~Ld~~~L-~~I~~~--v~vpLV---lHGgSG~~~e~i~~ai----~~G--v~KiNi 235 (288)
T 3q94_A 177 APALGSVHGPYKG-EPNLGFAEM-EQVRDF--TGVPLV---LHGGTGIPTADIEKAI----SLG--TSKINV 235 (288)
T ss_dssp EECSSCBSSCCSS-SCCCCHHHH-HHHHHH--HCSCEE---ECCCTTCCHHHHHHHH----HTT--EEEEEE
T ss_pred EEEcCcccCCcCC-CCccCHHHH-HHHHHh--cCCCEE---EeCCCCCCHHHHHHHH----HcC--CeEEEE
Confidence 9999885445542 234455443 333322 255443 4455 66667665544 455 444444
No 109
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=85.65 E-value=7.1 Score=33.34 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
+.+++...++.+.+.|...|--++|...+....++.+.-+.+.+. ..+.+-++.|..+.+.+..|.++|.+|+-
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~-~~v~VKaaGGIrt~~~a~~~i~aGa~RiG 217 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVG-ERLGVKASGGIRTAEQAAAMLDAGATRLG 217 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHT-TTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHhcchhcc
Confidence 789999988888899999887776632122344555444444333 46788889999999999999999999875
No 110
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=85.61 E-value=15 Score=30.67 Aligned_cols=163 Identities=12% Similarity=0.085 Sum_probs=96.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
.++++.++.++.+.+.|++-|-+.-- ++ .-.+.++.+++.++.+.... .++.+.++...++|.+.+..+ +
T Consensus 22 ~~~~~~~~~~~~l~~gGv~~iel~~k--~~------~~~~~i~~~~~~~~~~gag~-vl~~d~~~~A~~~GAd~v~~~-~ 91 (207)
T 2yw3_A 22 RGGEDLLGLARVLEEEGVGALEITLR--TE------KGLEALKALRKSGLLLGAGT-VRSPKEAEAALEAGAAFLVSP-G 91 (207)
T ss_dssp CSCCCHHHHHHHHHHTTCCEEEEECS--ST------HHHHHHHHHTTSSCEEEEES-CCSHHHHHHHHHHTCSEEEES-S
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC--Ch------HHHHHHHHHhCCCCEEEeCe-EeeHHHHHHHHHcCCCEEEcC-C
Confidence 35566777788888889998766422 21 12355555555334444444 678899999999999988654 3
Q ss_pred CCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCC
Q psy8190 178 TSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGS 257 (348)
Q Consensus 178 t~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~ 257 (348)
++. +.++.+++.|.. ++.|. .|.++.... .+.+ .+.+.+++ ..+
T Consensus 92 ~d~----------------~v~~~~~~~g~~----~i~G~-~t~~e~~~A----~~~G--ad~v~~fp-----a~~---- 135 (207)
T 2yw3_A 92 LLE----------------EVAALAQARGVP----YLPGV-LTPTEVERA----LALG--LSALKFFP-----AEP---- 135 (207)
T ss_dssp CCH----------------HHHHHHHHHTCC----EEEEE-CSHHHHHHH----HHTT--CCEEEETT-----TTT----
T ss_pred CCH----------------HHHHHHHHhCCC----EEecC-CCHHHHHHH----HHCC--CCEEEEec-----Ccc----
Confidence 322 445666667765 34453 466665443 4567 88888732 111
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeecc
Q psy8190 258 SILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLT 314 (348)
Q Consensus 258 ~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~ 314 (348)
.... ..+...+-.+|+..+-..+|- + .+.....+.+||+.+..+..+..
T Consensus 136 --~gG~---~~lk~l~~~~~~ipvvaiGGI-~--~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 136 --FQGV---RVLRAYAEVFPEVRFLPTGGI-K--EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp --TTHH---HHHHHHHHHCTTCEEEEBSSC-C--GGGHHHHHTCSSBSCEEESGGGS
T ss_pred --ccCH---HHHHHHHhhCCCCcEEEeCCC-C--HHHHHHHHhCCCcEEEEehhhhC
Confidence 1122 334456666776444334432 1 23334468899999977665533
No 111
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=85.55 E-value=6.3 Score=33.40 Aligned_cols=85 Identities=15% Similarity=0.180 Sum_probs=57.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
++.+++...++...+.|.+.|--+.|.. +...+.+.+..+.+.+ ...+.+-++.|..+.+.+..|.++|.+|+-. -
T Consensus 130 l~~e~i~~a~~ia~eaGADfVKTsTGf~-~~gat~~dv~~m~~~v-g~~v~VkaaGGirt~~~al~~i~aGa~RiG~--S 205 (220)
T 1ub3_A 130 FSPEEIARLAEAAIRGGADFLKTSTGFG-PRGASLEDVALLVRVA-QGRAQVKAAGGIRDRETALRMLKAGASRLGT--S 205 (220)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCCSSS-SCCCCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEEEE--T
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeCCCCC-CCCCCHHHHHHHHHhh-CCCCeEEEECCCCCHHHHHHHHHCCCcccch--h
Confidence 5788888888888889999887766532 2233445554444443 4467888888988999988899999997753 2
Q ss_pred CCHHHHhcc
Q psy8190 178 TSPKLYGDI 186 (348)
Q Consensus 178 t~~e~l~~i 186 (348)
+...+++.+
T Consensus 206 ~g~~I~~~~ 214 (220)
T 1ub3_A 206 SGVALVAGE 214 (220)
T ss_dssp THHHHHC--
T ss_pred HHHHHHHHh
Confidence 234555544
No 112
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=85.39 E-value=14 Score=32.86 Aligned_cols=119 Identities=13% Similarity=0.207 Sum_probs=70.8
Q ss_pred CCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecC------------------CCCHHHHHHHHHhCCCeeecc
Q psy8190 114 GATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLG------------------MLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 114 G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g------------------~l~~e~l~~Lk~aG~~~i~~g 175 (348)
|+++|-|.|+ ..|...+.....++++..+..++.+...+| ..+++....+.+.|+|.+-++
T Consensus 113 GFtSVMiDgS-~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~LAva 191 (306)
T 3pm6_A 113 GFDSIMVDMS-HFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWLAPA 191 (306)
T ss_dssp CCSEEEECCT-TSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEECCC
T ss_pred CCCEEEEeCC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCCEEEEE
Confidence 8999988776 333344556666777777777877775433 135688888878999999999
Q ss_pred CCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeec
Q psy8190 176 LDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPI 243 (348)
Q Consensus 176 ~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~ 243 (348)
+.|.--.|+.-.+..+++.. +.++..-..++++. +-|- |-..+++.+.+ +++ +.-+.+
T Consensus 192 iGt~HG~Yk~~~p~Ld~~~L-~~I~~~v~~~vpLV---lHGgSG~p~e~i~~ai----~~G--V~KiNi 250 (306)
T 3pm6_A 192 FGNVHGNYGPRGVQLDYERL-QRINEAVGERVGLV---LHGADPFTKEIFEKCI----ERG--VAKVNV 250 (306)
T ss_dssp SSCCSSCCCTTCCCCCHHHH-HHHHHHHTTTSEEE---ECSCTTCCHHHHHHHH----HTT--EEEEEE
T ss_pred cCccccCcCCCCCccCHHHH-HHHHHHhCCCCCEE---eeCCCCCCHHHHHHHH----HcC--CeEEEe
Confidence 98854555422233455433 33332221144433 4455 66666655444 555 444444
No 113
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=85.36 E-value=3.6 Score=37.32 Aligned_cols=78 Identities=13% Similarity=0.006 Sum_probs=53.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCC--cccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhC-CCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELK--DRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVG-LDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~--~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG-~~~i~ 173 (348)
.+.++..+.++.+.+.|+..|.++++..... ........++++.+++ .++++.++.|..+.+.++.+.+.| +|.|.
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIF 305 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEe
Confidence 3567888888888889999998877631110 1111123455566665 367887777777899999888888 89888
Q ss_pred cc
Q psy8190 174 HN 175 (348)
Q Consensus 174 ~g 175 (348)
+|
T Consensus 306 iG 307 (338)
T 1z41_A 306 IG 307 (338)
T ss_dssp EC
T ss_pred ec
Confidence 76
No 114
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=85.29 E-value=16 Score=32.54 Aligned_cols=87 Identities=21% Similarity=0.254 Sum_probs=56.3
Q ss_pred HHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC-----------------CCHHHHHHH-HHhCCC
Q psy8190 109 KAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM-----------------LNENQAYRL-KKVGLD 170 (348)
Q Consensus 109 ~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~-----------------l~~e~l~~L-k~aG~~ 170 (348)
.+.+.|+++|-|-|+ ..|...+.+...++++..+..++.+....|. .++|+...+ ++-|+|
T Consensus 92 ~ai~~GFtSVMiDgS-~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD 170 (307)
T 3n9r_A 92 KAVKAGFTSVMIDAS-HHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVD 170 (307)
T ss_dssp HHHHHTCSEEEECCT-TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCS
T ss_pred HHHHhCCCcEEEECC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCC
Confidence 345679999988776 3333455666677777777778877765432 245666554 568999
Q ss_pred eeeccCCCCHHHHhc-cCCCCCHHHHH
Q psy8190 171 YYNHNLDTSPKLYGD-IISTRDYENRL 196 (348)
Q Consensus 171 ~i~~g~et~~e~l~~-i~~~~~~~~~~ 196 (348)
.+-+++.|+--.|+. -.+..+++...
T Consensus 171 ~LAvaiGt~HG~Yk~~~~p~Ld~~~L~ 197 (307)
T 3n9r_A 171 YLAPAIGTSHGAFKFKGEPKLDFERLQ 197 (307)
T ss_dssp EEEECSSCCSSSBCCSSSCCCCHHHHH
T ss_pred EEEEecCCcccccCCCCCCccCHHHHH
Confidence 999999986555652 23444655443
No 115
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=84.85 E-value=3.3 Score=37.66 Aligned_cols=77 Identities=10% Similarity=-0.023 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc--ccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhC-CCeeec
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD--RDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVG-LDYYNH 174 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~--~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG-~~~i~~ 174 (348)
+.++..+.++.+.+.|+..|.+..|...+.. .......++++.+++ .++++.++.|..+.+.++.+.+.| +|.|.+
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 4567777777777888888887654221110 011223455666665 367777777777888888888887 888776
Q ss_pred c
Q psy8190 175 N 175 (348)
Q Consensus 175 g 175 (348)
|
T Consensus 307 G 307 (340)
T 3gr7_A 307 G 307 (340)
T ss_dssp C
T ss_pred c
Confidence 5
No 116
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=84.63 E-value=14 Score=32.90 Aligned_cols=105 Identities=13% Similarity=0.096 Sum_probs=62.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc--ccHHHHHHHHHHHHh-cCcEEEEe------cCCCCH-HHHHHHH--
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKD--RDLDNIENMICEVKK-IGLETCLT------LGMLNE-NQAYRLK-- 165 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~--~~~~~~~~l~~~i~~-~~~~i~~~------~g~l~~-e~l~~Lk-- 165 (348)
.+.+++.+.+..+.+.|++.|+...|+. |.. ....+-.++++.+++ .++.+.+. +..-+. ..++.|+
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDp-p~~~~~~~~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~K 172 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDL-PPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRK 172 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCC-C------CCCHHHHHHHHHHHCCCEEEEEECTTCCTTCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCC-CCCCCCCCCCHHHHHHHHHHcCCCeEEEEeCCCcCCCCCCHHHHHHHHHHH
Confidence 5778888888888899999987766632 211 112234556666665 34554432 333333 2455554
Q ss_pred -HhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec
Q psy8190 166 -KVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL 217 (348)
Q Consensus 166 -~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl 217 (348)
++|.+.+-- | .-.+.+...+.++.+++.|+.+ -++.|+
T Consensus 173 vdAGAdf~iT--Q----------~ffD~~~~~~f~~~~r~~Gi~v--PIi~GI 211 (304)
T 3fst_A 173 VDAGANRAIT--Q----------FFFDVESYLRFRDRCVSAGIDV--EIIPGI 211 (304)
T ss_dssp HHHTCCEEEE--C----------CCSCHHHHHHHHHHHHHTTCCS--CEECEE
T ss_pred HHcCCCEEEe--C----------ccCCHHHHHHHHHHHHhcCCCC--cEEEEe
Confidence 679887541 1 1246677777888888888743 445555
No 117
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=84.56 E-value=2.6 Score=38.83 Aligned_cols=82 Identities=15% Similarity=0.100 Sum_probs=55.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEE--eccCC------CCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCM--GAAWR------ELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l--~gg~~------~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~ 169 (348)
-+++++.+.+++..+.|+..+-+ .|+.. .....+.+.+.++++..++.++.+.++.. ..+.++...++|+
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~~l~~g~ 246 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAY--TGRAIARAVRCGV 246 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEE--EHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeC--ChHHHHHHHHcCC
Confidence 46788888888888888776533 22211 11135678899999999988877766554 4556777777899
Q ss_pred CeeeccCCCCHH
Q psy8190 170 DYYNHNLDTSPK 181 (348)
Q Consensus 170 ~~i~~g~et~~e 181 (348)
+++.++.-.+++
T Consensus 247 ~~i~H~~~~~~~ 258 (423)
T 3feq_A 247 RTIEHGNLVDEA 258 (423)
T ss_dssp CEEEEEEECCHH
T ss_pred CEEeccCcCCHH
Confidence 888876544443
No 118
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=84.50 E-value=4.4 Score=37.44 Aligned_cols=79 Identities=10% Similarity=0.120 Sum_probs=54.5
Q ss_pred ccCHHHHHHHHHHHHhC---CCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCC--HHH-HHHHHHhCCC
Q psy8190 97 ILSIESVITAAQKAKSD---GATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLN--ENQ-AYRLKKVGLD 170 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~---G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~--~e~-l~~Lk~aG~~ 170 (348)
..++++..+.++.+.+. |+-.|-|.|. +. ..+...+.+.++..++.|+.++++.|... .+. .+.+...|.+
T Consensus 161 ~~~~e~a~~~~~~a~~~~~~~VvG~dL~g~-E~--~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~lga~ 237 (380)
T 4gxw_A 161 EQDPDEAVAIVDWMKANRADEVAGIGIDYR-EN--DRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHVD 237 (380)
T ss_dssp TSCHHHHHHHHHHHHHTCCTTBCEEEEESC-CT--TCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTSCCS
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeecCC-CC--CCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHcCCc
Confidence 35677777777665543 5667777765 22 22345678888888888999999988643 343 4455557999
Q ss_pred eeeccCCC
Q psy8190 171 YYNHNLDT 178 (348)
Q Consensus 171 ~i~~g~et 178 (348)
||.+|+-.
T Consensus 238 RIgHG~~~ 245 (380)
T 4gxw_A 238 RVDHGYTI 245 (380)
T ss_dssp EEEECGGG
T ss_pred ccccceee
Confidence 99999865
No 119
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=84.23 E-value=7.5 Score=32.94 Aligned_cols=74 Identities=15% Similarity=0.174 Sum_probs=52.4
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
++.+++...++.+.+.|+..|...+|.. ....+.+.+..+.+.+. ..+++..+.|..+.+.+..+.++|.+++.
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~tstg~~-~gga~~~~i~~v~~~v~-~~ipVia~GGI~t~~da~~~l~aGA~~iG 202 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTSTGFA-PRGTTLEEVRLIKSSAK-GRIKVKASGGIRDLETAISMIEAGADRIG 202 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCS-SSCCCHHHHHHHHHHHT-TSSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECCCCC-CCCCCHHHHHHHHHHhC-CCCcEEEECCCCCHHHHHHHHHhCchHHH
Confidence 5677888888888889999986654421 12234555555444432 25788889999999998888899999764
No 120
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=84.21 E-value=18 Score=31.64 Aligned_cols=125 Identities=14% Similarity=0.073 Sum_probs=85.4
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEec--------CCCCHHHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTL--------GMLNENQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~--------g~l~~e~l~~Lk~aG~ 169 (348)
+++..+.+.++.+..+ ++.+-|++|.... ..+ +.+.++..++.++.++.-. -..-++.++..++.|+
T Consensus 50 lg~~~~~DlLe~ag~y-ID~lKfg~GTs~l---~~~-l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF 124 (276)
T 1u83_A 50 YPLQFFKDAIAGASDY-IDFVKFGWGTSLL---TKD-LEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGC 124 (276)
T ss_dssp CCHHHHHHHHHHHGGG-CCEEEECTTGGGG---CTT-HHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCcchhh---hHH-HHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCC
Confidence 5677776665544443 8888898873222 222 8888888888888886311 1245678999999999
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-------CCCHHHHHHHHHHHHhcCCCCCee
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-------SESRDQRAELIFQLANLNPYPESV 241 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-------get~e~~~~~l~~l~~l~~~~~~i 241 (348)
+.|.++-.|. .-+.+++.+.|+.+++. +.+-+.+ |- -.+++++++.++.-.+.+ .+.|
T Consensus 125 ~~IEISdGti---------~l~~~~~~~lI~~a~~~-f~Vl~Ev--G~K~~~~~~~~~~~~~I~~~~~dLeAG--A~~V 189 (276)
T 1u83_A 125 EYIEISNGTL---------PMTNKEKAAYIADFSDE-FLVLSEV--GSKDAELASRQSSEEWLEYIVEDMEAG--AEKV 189 (276)
T ss_dssp SEEEECCSSS---------CCCHHHHHHHHHHHTTT-SEEEEEC--SCCC------CCSTHHHHHHHHHHHHT--EEEE
T ss_pred CEEEECCCcc---------cCCHHHHHHHHHHHHhh-cEEeeec--cccCccccCCCCHHHHHHHHHHHHHCC--CcEE
Confidence 9999876652 24678899999999888 7665442 33 235677888887777776 4444
No 121
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=84.10 E-value=14 Score=32.13 Aligned_cols=200 Identities=17% Similarity=0.123 Sum_probs=108.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc-------ccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCe
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD-------RDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDY 171 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~-------~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~ 171 (348)
+++..++.++.+++.|+.-|.++.- .|-. ...+.+..+.+..++.|+.+.+.+ ++.+.++.+.+. ++.
T Consensus 35 ~~e~a~~~a~~l~~~Ga~~vk~~~f--kprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~--~d~~~~~~l~~~-vd~ 109 (262)
T 1zco_A 35 SREQIMKVAEFLAEVGIKVLRGGAF--KPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV--MDTRHVELVAKY-SDI 109 (262)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSS--CCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC--CCGGGHHHHHHH-CSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEec--ccCCCcccccCccHHHHHHHHHHHHHcCCcEEEee--CCHHhHHHHHhh-CCE
Confidence 5788899999999999987777653 2211 125566555555566788886554 566668888888 899
Q ss_pred eeccCCC--CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccccccc
Q psy8190 172 YNHNLDT--SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQI 249 (348)
Q Consensus 172 i~~g~et--~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~ 249 (348)
+.++--+ +..+++. +.+.|.+|. +=-|..-|.+++.+.++.+..-+ ...+.+- .
T Consensus 110 ~kIga~~~~n~~ll~~----------------~a~~~kPV~--lk~G~~~t~~e~~~Av~~i~~~G--n~~i~L~----~ 165 (262)
T 1zco_A 110 LQIGARNSQNFELLKE----------------VGKVENPVL--LKRGMGNTIQELLYSAEYIMAQG--NENVILC----E 165 (262)
T ss_dssp EEECGGGTTCHHHHHH----------------HTTSSSCEE--EECCTTCCHHHHHHHHHHHHTTT--CCCEEEE----E
T ss_pred EEECcccccCHHHHHH----------------HHhcCCcEE--EecCCCCCHHHHHHHHHHHHHCC--CCeEEEE----E
Confidence 8886533 2333333 333455442 23444447899999999888876 3332221 1
Q ss_pred CC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCceecc---ccccccchhhHHHHHHhCcceeeeCCeec----cCCCCC--
Q psy8190 250 KG-TPLYGSSILDPLEFIRTIAVARITMPTSRIRMS---AGRKEMGETTQAFCFLAGANSIFYGDKLL----TTDNTK-- 319 (348)
Q Consensus 250 ~g-T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s---~g~~~l~~~~~~~~l~~GAn~~~~~~~~~----~~~g~~-- 319 (348)
.| +-+.+++..+. .++.+...+....-..|-.+ .|...+-+.....++..||+++|.+.++. -.+|+.
T Consensus 166 RG~~~~~~y~~~~v--~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl 243 (262)
T 1zco_A 166 RGIRTFETATRFTL--DISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQL 243 (262)
T ss_dssp CCBCCSCCSSSSBC--CTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCB
T ss_pred CCCCCCCCcChhhc--CHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCC
Confidence 12 11111111111 11222233333211111222 11111223556668899999998765431 124443
Q ss_pred -chHHHHHHHH
Q psy8190 320 -TNDDSKLLKK 329 (348)
Q Consensus 320 -~~~~~~~i~~ 329 (348)
+++..+++++
T Consensus 244 ~p~~~~~l~~~ 254 (262)
T 1zco_A 244 TFDDFLQLLKE 254 (262)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 3566666544
No 122
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=83.80 E-value=23 Score=31.46 Aligned_cols=155 Identities=14% Similarity=0.087 Sum_probs=92.5
Q ss_pred ecCCCCHHHHHHHHHhCCCeeecc-CCCCHHHHhccCC-CCCHHHHHHHHHHHHHc--CCeeeEeEeeecCCCHHHHHHH
Q psy8190 152 TLGMLNENQAYRLKKVGLDYYNHN-LDTSPKLYGDIIS-TRDYENRLNTLKNVRNV--GINICCGGIIGLSESRDQRAEL 227 (348)
Q Consensus 152 ~~g~l~~e~l~~Lk~aG~~~i~~g-~et~~e~l~~i~~-~~~~~~~~~~i~~~~~~--G~~i~~~~i~Glget~e~~~~~ 227 (348)
-++..+.-..+.+.++|++.+.++ ...+...+-.=.. .-+.++.+...+.+.+. .+++.+++=.|+| +.+++.++
T Consensus 22 ~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg-~~~~v~~t 100 (302)
T 3fa4_A 22 APGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYG-GPIMVART 100 (302)
T ss_dssp EEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTS-SHHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCC-CHHHHHHH
Confidence 355677778888999999998862 2111122221111 24889998888887764 6789999999987 47889999
Q ss_pred HHHHHhcCCCCCeeeccc-ccccCCCCCCCCCCCCHHHHHHHHHHHHHHC----CCCce--eccccc-cccc--hhhHHH
Q psy8190 228 IFQLANLNPYPESVPINN-LVQIKGTPLYGSSILDPLEFIRTIAVARITM----PTSRI--RMSAGR-KEMG--ETTQAF 297 (348)
Q Consensus 228 l~~l~~l~~~~~~i~~~~-l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~l----p~~~i--~~s~g~-~~l~--~~~~~~ 297 (348)
.+.+.+.+ ...+.+-= ..|.+-..+...+..+.++...-+..++..- ++.-| |.-.-. +.+. -.-...
T Consensus 101 v~~l~~aG--aagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~a 178 (302)
T 3fa4_A 101 TEQYSRSG--VAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRA 178 (302)
T ss_dssp HHHHHHTT--CCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHH
T ss_pred HHHHHHcC--CcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHH
Confidence 99998887 66666532 2233222223345677888877777776542 34333 211100 1111 112233
Q ss_pred HHHhCcceeeeC
Q psy8190 298 CFLAGANSIFYG 309 (348)
Q Consensus 298 ~l~~GAn~~~~~ 309 (348)
...+|||.++..
T Consensus 179 y~eAGAD~ifi~ 190 (302)
T 3fa4_A 179 ARDAGADVGFLE 190 (302)
T ss_dssp HHTTTCSEEEET
T ss_pred HHHcCCCEEeec
Confidence 467999999764
No 123
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=83.50 E-value=18 Score=32.49 Aligned_cols=134 Identities=14% Similarity=0.099 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHH-hCCCCEEEEeccCCCCC--cccHHHHHHHHHHHHh-cCcEEEEe-cC--CCCHHHHHHHHHhCCCe-
Q psy8190 100 IESVITAAQKAK-SDGATRFCMGAAWRELK--DRDLDNIENMICEVKK-IGLETCLT-LG--MLNENQAYRLKKVGLDY- 171 (348)
Q Consensus 100 ~eei~~~~~~~~-~~G~~~i~l~gg~~~~~--~~~~~~~~~l~~~i~~-~~~~i~~~-~g--~l~~e~l~~Lk~aG~~~- 171 (348)
.+++.+.++... +.|+.-|-+++..+.|. ..+.+.+.+.++.+.+ .++.+++- .| +.+.+.++.-.++|.+.
T Consensus 79 ~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~ 158 (323)
T 4djd_D 79 INEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGEN 158 (323)
T ss_dssp TTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSC
T ss_pred HHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCC
Confidence 345777777777 88999998876433442 2456678888888876 46666543 22 45668888888888552
Q ss_pred -eeccCCC--CHHHHhccC---------CCCCHHHHHHHHHHHHHcCC---eeeEeEeee-cCCCHHHHHHHHHHHHh
Q psy8190 172 -YNHNLDT--SPKLYGDII---------STRDYENRLNTLKNVRNVGI---NICCGGIIG-LSESRDQRAELIFQLAN 233 (348)
Q Consensus 172 -i~~g~et--~~e~l~~i~---------~~~~~~~~~~~i~~~~~~G~---~i~~~~i~G-lget~e~~~~~l~~l~~ 233 (348)
+--++.. .++++..+. ...+.+...+.++.+.++|+ ++..+-.+| +|.+.++-.+.++.++.
T Consensus 159 ~lINsv~~~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 159 LLLGNAEQENYKSLTAACMVHKHNIIARSPLDINICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp CEEEEEBTTBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred CeEEECCcccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHHHH
Confidence 2112222 255554221 12245555666778889999 377787788 48899988888888876
No 124
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=83.31 E-value=20 Score=30.38 Aligned_cols=128 Identities=15% Similarity=0.161 Sum_probs=77.4
Q ss_pred HHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCe
Q psy8190 161 AYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPES 240 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~ 240 (348)
...++++|++.+.++.-- |...+.+.-+.++.++++|+.+ |+=.||+.|. ..+..++ +..
T Consensus 81 ~~~l~~~Ga~~Vllghse---------RR~~~~e~~~k~~~A~~~GL~~----ivcVge~~e~-----~~~~~~~--~~i 140 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSE---------NRMILADLEAAIRRAEEVGLMT----MVCSNNPAVS-----AAVAALN--PDY 140 (225)
T ss_dssp HHHHHHTTCCEEEESCGG---------GCCBHHHHHHHHHHHHHHTCEE----EEEESSHHHH-----HHHHTTC--CSE
T ss_pred HHHHHHcCCCEEEECcch---------hcCCHHHHHHHHHHHHHCCCEE----EEEeCCHHHH-----HHHhcCC--CCE
Confidence 778999999999976511 1134455778889999999964 3333566554 3345565 555
Q ss_pred eecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 241 VPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 241 i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
|.+.+.- .-||-..- ...+++..-.+....|.+.++..|-..+| .+- .+........|+|.++.|+..
T Consensus 141 Iayep~w-aiGtG~~v-~t~~~d~~~~~~~~ir~~~~~~~ilyggs-V~~-~n~~~~~~~~~vDG~LVG~a~ 208 (225)
T 1hg3_A 141 VAVEPPE-LIGTGIPV-SKAKPEVITNTVELVKKVNPEVKVLCGAG-IST-GEDVKKAIELGTVGVLLASGV 208 (225)
T ss_dssp EEECCTT-TTTTSCCT-TTSCTHHHHHHHHHHHHHCTTSEEEEESS-CCS-HHHHHHHHHTTCSEEEESHHH
T ss_pred EEEeChh-hhccCCCC-CCCChhHHHHHHHHHHhccCCCEEEEeCC-CCc-HHHHHHHHhCCCCEEEeCHHH
Confidence 5554432 23443110 23566667778888888766543332222 221 344555678899999888754
No 125
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=82.93 E-value=12 Score=31.93 Aligned_cols=70 Identities=13% Similarity=0.088 Sum_probs=53.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-c-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-I-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+++++...+....-.|..-|++.+.+. + .+ .++++++++ . ++++.+-.|..++|.++.+. +|+|.+-+|
T Consensus 137 ~~~e~~~~~a~~a~~~g~~~VYld~sG~-~--~~----~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVG 208 (228)
T 3vzx_A 137 LNMDDIVAYARVSELLQLPIFYLEYSGV-L--GD----IEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVG 208 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECTTS-C--CC----HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCC-c--CC----HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEC
Confidence 3578888888777767899999877432 2 12 466666666 4 68899999999999999998 799999875
No 126
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=82.93 E-value=16 Score=33.52 Aligned_cols=156 Identities=13% Similarity=0.173 Sum_probs=88.2
Q ss_pred HHHHHHHHhCCCeeeccCCCCHHHHhccCC--CCCHHHHHHHHHHHHHc-CCeeeEeEeeecCCCHHHHHHHHHHHHhcC
Q psy8190 159 NQAYRLKKVGLDYYNHNLDTSPKLYGDIIS--TRDYENRLNTLKNVRNV-GINICCGGIIGLSESRDQRAELIFQLANLN 235 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~--~~~~~~~~~~i~~~~~~-G~~i~~~~i~Glget~e~~~~~l~~l~~l~ 235 (348)
+..+....+|.|.+.+.+...++. +.+ ..++..|++.++.+++. ++++.+-. +|.|-+.++ +..+.+.+
T Consensus 159 ~~~~~ve~~~adal~ihln~~qe~---~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s~e~----A~~l~~aG 230 (365)
T 3sr7_A 159 AGLQAVRDLQPLFLQVHINLMQEL---LMPEGEREFRSWKKHLSDYAKKLQLPFILKE-VGFGMDVKT----IQTAIDLG 230 (365)
T ss_dssp HHHHHHHHHCCSCEEEEECHHHHH---TSSSSCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCCHHH----HHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEeccccccc---cCCCCCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCCHHH----HHHHHHcC
Confidence 445566688999988776543333 222 24677888999998874 77777664 577777654 45566777
Q ss_pred CCCCeeecccccccCCCCC--------------CCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHh
Q psy8190 236 PYPESVPINNLVQIKGTPL--------------YGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLA 301 (348)
Q Consensus 236 ~~~~~i~~~~l~P~~gT~l--------------~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~ 301 (348)
++.|.+.-. .||.+ .+...++. +.+. .++...++..|-+++|-.+ ..-...++.+
T Consensus 231 --ad~I~V~g~---GGt~~a~ie~~r~~~~~~~~~~g~pt~-~~L~---~v~~~~~~ipvia~GGI~~--g~Dv~KaLal 299 (365)
T 3sr7_A 231 --VKTVDISGR---GGTSFAYIENRRGGNRSYLNQWGQTTA-QVLL---NAQPLMDKVEILASGGIRH--PLDIIKALVL 299 (365)
T ss_dssp --CCEEECCCB---C--------------CGGGTTCSCBHH-HHHH---HHGGGTTTSEEEECSSCCS--HHHHHHHHHH
T ss_pred --CCEEEEeCC---CCcccchhhccccccccccccccccHH-HHHH---HHHHhcCCCeEEEeCCCCC--HHHHHHHHHc
Confidence 888877543 45443 12233332 2222 2233334444545555322 2334557889
Q ss_pred CcceeeeCCeeccC---CCCC-c--------hHHHHHHHHcCCC
Q psy8190 302 GANSIFYGDKLLTT---DNTK-T--------NDDSKLLKKLGIN 333 (348)
Q Consensus 302 GAn~~~~~~~~~~~---~g~~-~--------~~~~~~i~~~G~~ 333 (348)
||+.++.|..++.. .|.. . +++...+...|..
T Consensus 300 GAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~ 343 (365)
T 3sr7_A 300 GAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQ 343 (365)
T ss_dssp TCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999777543221 2311 1 3555666777875
No 127
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=82.05 E-value=22 Score=30.08 Aligned_cols=184 Identities=13% Similarity=0.104 Sum_probs=109.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecC----CCCH----HHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLG----MLNE----NQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g----~l~~----e~l~~Lk~aG~ 169 (348)
.+.+++.+.++++.+.|+..|++.-+ ......+.++ ++.++.-.| ..+. ...+. .+.|.
T Consensus 14 ~t~~~i~~l~~~A~~~~~~aVcv~p~-------~v~~a~~~l~-----gv~v~tvigFP~G~~~~~~k~~E~~~-i~~GA 80 (226)
T 1vcv_A 14 LTVDEAVAGARKAEELGVAAYCVNPI-------YAPVVRPLLR-----KVKLCVVADFPFGALPTASRIALVSR-LAEVA 80 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG-------GHHHHGGGCS-----SSEEEEEESTTTCCSCHHHHHHHHHH-HTTTC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECHH-------HHHHHHHHhC-----CCeEEEEeCCCCCCCchHHHHHHHHH-HHCCC
Confidence 57899999999999999999988432 2222222222 256654333 3333 34566 77899
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeeccc-cc
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINN-LV 247 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~-l~ 247 (348)
+-|.+-+.- ..+ +...++...+-++.++++--....-+|+-. .-|.+++....+...+.+ .+.|.-+. |.
T Consensus 81 dEID~Vini--g~~----~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaG--ADfVKTSTGf~ 152 (226)
T 1vcv_A 81 DEIDVVAPI--GLV----KSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAG--AHFIKSSTGFA 152 (226)
T ss_dssp SEEEEECCH--HHH----HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHT--CSEEECCCSCC
T ss_pred CEEEEecch--hhh----cCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcC--CCEEEeCCCCC
Confidence 988754421 111 134667777777766663111133445544 347888988999999998 88887652 22
Q ss_pred c-cCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHh---Ccc
Q psy8190 248 Q-IKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLA---GAN 304 (348)
Q Consensus 248 P-~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~---GAn 304 (348)
| ...++.++....+.+...-|....+..=++..|.+++|-.+. +.....+.+ ||+
T Consensus 153 ~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~--~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 153 EEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTR--EQAKAIVDAIGWGED 211 (226)
T ss_dssp CHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSH--HHHHHHHHHHCSCSC
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCH--HHHHHHHHHHHCCCC
Confidence 1 112334444556777766665555555556778888775442 223334566 888
No 128
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=81.90 E-value=26 Score=30.75 Aligned_cols=123 Identities=13% Similarity=0.068 Sum_probs=75.5
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-C---cEEEEecC-CCCHHHHHHHHHhCCCee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-G---LETCLTLG-MLNENQAYRLKKVGLDYY 172 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-~---~~i~~~~g-~l~~e~l~~Lk~aG~~~i 172 (348)
.+++++.+.++.+.+.|+..+.+.+. .. ...+..+.++++.+++. . +.++.+.+ -+.......-.++|++.+
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt--~G-~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~v 228 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDT--IG-RGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVF 228 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEET--TS-CCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCC--CC-CcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEE
Confidence 57899999999998999999998753 11 24567888999999873 2 34455333 233444445557899999
Q ss_pred eccCCC-CHHHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 173 NHNLDT-SPKLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 173 ~~g~et-~~e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
...+-. ..--|-.-+.+ -..++.+..++ +.|+.+. -+.+.+.+..+++.++
T Consensus 229 d~sv~GlG~cp~a~g~~GN~~~e~lv~~l~---~~g~~~~--------id~~~l~~~~~~~~~~ 281 (295)
T 1ydn_A 229 DASVGGLGGCPFAPGAKGNVDTVAVVEMLH---EMGFETG--------LDLDRLRSAGLFTQAL 281 (295)
T ss_dssp EEBTTCCSCBTTBTTSCCBCBHHHHHHHHH---HTTCBCC--------CCHHHHHHHHHHHHHH
T ss_pred EeccccCCCCCCCCCCcCChhHHHHHHHHH---hcCCCCC--------cCHHHHHHHHHHHHHH
Confidence 977644 22112211222 35676666554 4666542 2455566666665554
No 129
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=81.82 E-value=12 Score=31.90 Aligned_cols=65 Identities=8% Similarity=0.132 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCcE-EEEecC----CCCH----HHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHc
Q psy8190 135 IENMICEVKKIGLE-TCLTLG----MLNE----NQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV 205 (348)
Q Consensus 135 ~~~l~~~i~~~~~~-i~~~~g----~l~~----e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~ 205 (348)
+.+.++.+++.|+. +.+... ..++ +..+.++++|+.-..++.... .+.+...+.++.+++.
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----------~~~~~~~~~i~~A~~l 101 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM----------KSEEEIDRAFDYAKRV 101 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE----------CSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc----------CCHHHHHHHHHHHHHh
Confidence 45556666665442 333322 2333 334455566776544432111 4567777778888888
Q ss_pred CCee
Q psy8190 206 GINI 209 (348)
Q Consensus 206 G~~i 209 (348)
|.+.
T Consensus 102 Ga~~ 105 (257)
T 3lmz_A 102 GVKL 105 (257)
T ss_dssp TCSE
T ss_pred CCCE
Confidence 8753
No 130
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=81.82 E-value=11 Score=32.06 Aligned_cols=73 Identities=16% Similarity=0.108 Sum_probs=51.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCC---------CCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWR---------ELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKK 166 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~---------~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~ 166 (348)
++.+++...++...+.|...|--++|.. ++...+++...-+.+.++.. .+.+-++.|..+.+.+..|.+
T Consensus 125 Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~ 204 (226)
T 1vcv_A 125 LRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVD 204 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence 4678888888888888998887766632 02234555554444444443 377888889999999888888
Q ss_pred h---CCC
Q psy8190 167 V---GLD 170 (348)
Q Consensus 167 a---G~~ 170 (348)
+ |.+
T Consensus 205 a~~~Ga~ 211 (226)
T 1vcv_A 205 AIGWGED 211 (226)
T ss_dssp HHCSCSC
T ss_pred HHHCCCC
Confidence 8 988
No 131
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=81.44 E-value=5.8 Score=34.29 Aligned_cols=65 Identities=17% Similarity=0.060 Sum_probs=45.6
Q ss_pred HHHHHhCCCCEEEEeccCC--CCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAAWR--ELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~--~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|+..|++.+... .....+ .++++.+++ .++++.++.|.-+.+.+..+.++|++.+-+|
T Consensus 162 ~~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 162 VVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA 229 (266)
T ss_dssp HHHHHHTTCSEEEEEETTTTTTCSCCC----HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHcCCCEEEEEeecCCCCcCCCC----HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHcc
Confidence 3445567999998865311 111223 345566665 4788888999999999999999999998875
No 132
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=81.42 E-value=24 Score=29.93 Aligned_cols=129 Identities=16% Similarity=0.243 Sum_probs=78.4
Q ss_pred HHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCe
Q psy8190 161 AYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPES 240 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~ 240 (348)
+..++++|++.+.++.-- |...+.+.-+.++.++++|+.+ |+=.||+.|. ..+..++ +..
T Consensus 78 ~~~l~~~Ga~~Vllghse---------RR~~~~e~~~k~~~A~~~GL~~----ivcVge~~e~-----~~~~~~~--~~i 137 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSE---------APLKLNDLARLVAKAKSLGLDV----VVCAPDPRTS-----LAAAALG--PHA 137 (226)
T ss_dssp HHHHHHHTCCEEEECCTT---------SCCBHHHHHHHHHHHHHTTCEE----EEEESSHHHH-----HHHHHTC--CSE
T ss_pred HHHHHHcCCCEEEEeeee---------ccCCHHHHHHHHHHHHHCCCEE----EEEeCCHHHH-----HHHhcCC--CCE
Confidence 778999999999976521 1134455677889999999964 3333566554 3345566 566
Q ss_pred eecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 241 VPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 241 i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
|.+.+.- .-||...- ...+++..-.+....|.+.++..|-..+| .+- .+........|+|.++.|+...
T Consensus 138 Iayep~w-aiGtG~~v-~t~~~d~~~~~~~~ir~~~~~~~ilyggs-V~~-~n~~~~~~~~giDG~LVG~a~l 206 (226)
T 1w0m_A 138 VAVEPPE-LIGTGRAV-SRYKPEAIVETVGLVSRHFPEVSVITGAG-IES-GDDVAAALRLGTRGVLLASAAV 206 (226)
T ss_dssp EEECCGG-GTTTSCCH-HHHCHHHHHHHHHHHHHHCTTSEEEEESS-CCS-HHHHHHHHHTTCSEEEECHHHH
T ss_pred EEEcChh-hhccCCCC-CCCChhHHHHHHHHHHhccCCCEEEEeCC-CCc-HHHHHHHHhCCCCEEEECHHHH
Confidence 6555532 23443110 13566777778888888766543332222 221 3445556789999998887543
No 133
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=81.10 E-value=6.8 Score=35.68 Aligned_cols=77 Identities=21% Similarity=0.117 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc---ccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhC-CCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD---RDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVG-LDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~---~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG-~~~i~ 173 (348)
+.++.+..++.+.+.|+..|.+..|+..+.. ....+..++++.+++ .++.+.++.+..+.+.++.+.+.| +|.|.
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~ 316 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVL 316 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEE
Confidence 4667777777777778887777643221110 011123445555555 356666666666777777777777 77777
Q ss_pred cc
Q psy8190 174 HN 175 (348)
Q Consensus 174 ~g 175 (348)
+|
T Consensus 317 iG 318 (349)
T 3hgj_A 317 LG 318 (349)
T ss_dssp ES
T ss_pred ec
Confidence 65
No 134
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=80.65 E-value=5.7 Score=33.97 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=55.5
Q ss_pred HHHHHhCCCCEEEEeccCCC--CCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHH
Q psy8190 107 AQKAKSDGATRFCMGAAWRE--LKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLY 183 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~--~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l 183 (348)
++.+.+.|+..|++.+...+ ....+. ++++.+++ .++++.++.|.-+.+.+..+.++|++.+-++= .++
T Consensus 158 ~~~~~~~G~~~i~~~~~~~~g~~~g~~~----~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgs----al~ 229 (252)
T 1ka9_F 158 AVKGVELGAGEILLTSMDRDGTKEGYDL----RLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAAS----VFH 229 (252)
T ss_dssp HHHHHHHTCCEEEEEETTTTTTCSCCCH----HHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESH----HHH
T ss_pred HHHHHHcCCCEEEEecccCCCCcCCCCH----HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHH----HHH
Confidence 34455579998877642111 112233 44444544 47888889998888999999999999987642 222
Q ss_pred hccCCCCCHHHHHHHHHHHHHcCCeee
Q psy8190 184 GDIISTRDYENRLNTLKNVRNVGINIC 210 (348)
Q Consensus 184 ~~i~~~~~~~~~~~~i~~~~~~G~~i~ 210 (348)
. ...++++. .+.+.+.|+.+.
T Consensus 230 ~---~~~~~~~~---~~~l~~~~~~~~ 250 (252)
T 1ka9_F 230 F---GEIPIPKL---KRYLAEKGVHVR 250 (252)
T ss_dssp T---TSSCHHHH---HHHHHHTTCCBC
T ss_pred c---CCCCHHHH---HHHHHHCCCCcC
Confidence 1 22355544 444567787664
No 135
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=80.61 E-value=7.9 Score=34.50 Aligned_cols=63 Identities=19% Similarity=0.153 Sum_probs=38.8
Q ss_pred HHHHHHHHHhc-CcEEEEec-----C--CCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcC
Q psy8190 135 IENMICEVKKI-GLETCLTL-----G--MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVG 206 (348)
Q Consensus 135 ~~~l~~~i~~~-~~~i~~~~-----g--~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G 206 (348)
+.+.++.|++. ++.+-++| + ..+.+.++.|+++|++.|.+ ..+.++.++.....+.+++.|
T Consensus 185 ~~eaI~~I~~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv-----------~~~~~~~~~~~~~~~lA~~~g 253 (301)
T 3o0f_A 185 THEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEV-----------WHRGNPPEQRERLLTIAARHD 253 (301)
T ss_dssp HHHHHHHHHHTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEE-----------ESTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEE-----------eCCCCCHHHHHHHHHHHHHcC
Confidence 45566666654 45666666 2 34566777777777766642 223456666666677777777
Q ss_pred Ce
Q psy8190 207 IN 208 (348)
Q Consensus 207 ~~ 208 (348)
+-
T Consensus 254 L~ 255 (301)
T 3o0f_A 254 LL 255 (301)
T ss_dssp CE
T ss_pred Cc
Confidence 64
No 136
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=79.63 E-value=33 Score=30.42 Aligned_cols=155 Identities=15% Similarity=0.083 Sum_probs=96.1
Q ss_pred ecCCCCHHHHHHHHHhCCCeeeccC-CCCHHHHhccCC-CCCHHHHHHHHHHHHH-cCCeeeEeEeeecCCCHHHHHHHH
Q psy8190 152 TLGMLNENQAYRLKKVGLDYYNHNL-DTSPKLYGDIIS-TRDYENRLNTLKNVRN-VGINICCGGIIGLSESRDQRAELI 228 (348)
Q Consensus 152 ~~g~l~~e~l~~Lk~aG~~~i~~g~-et~~e~l~~i~~-~~~~~~~~~~i~~~~~-~G~~i~~~~i~Glget~e~~~~~l 228 (348)
-++..+.-..+.+.++|++.+.++= ..+...+-.=.. .-+.++.+..++.+.+ ..+++.+++=.|+| ++++..++.
T Consensus 26 ~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~v~~~v 104 (298)
T 3eoo_A 26 VVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWG-GAFNIARTI 104 (298)
T ss_dssp EEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSS-SHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCC-CHHHHHHHH
Confidence 4667788888889999999988641 111111111111 2388999998887755 67789999888987 889999999
Q ss_pred HHHHhcCCCCCeeeccc-ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--ceec--ccc-ccccc--hhhHHHHHH
Q psy8190 229 FQLANLNPYPESVPINN-LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTS--RIRM--SAG-RKEMG--ETTQAFCFL 300 (348)
Q Consensus 229 ~~l~~l~~~~~~i~~~~-l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~--~i~~--s~g-~~~l~--~~~~~~~l~ 300 (348)
+.+.+.+ ...+.+-- ..|..-.-+......+.++...-+..++..-.+. .|.+ -.- ...+. -.-......
T Consensus 105 ~~l~~aG--aagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~ 182 (298)
T 3eoo_A 105 RSFIKAG--VGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVE 182 (298)
T ss_dssp HHHHHTT--CSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC--CeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHh
Confidence 9998887 66665522 1232211123345678888888888888776432 2321 110 01011 012233467
Q ss_pred hCcceeeeC
Q psy8190 301 AGANSIFYG 309 (348)
Q Consensus 301 ~GAn~~~~~ 309 (348)
+|||.++..
T Consensus 183 AGAD~if~~ 191 (298)
T 3eoo_A 183 AGADMIFPE 191 (298)
T ss_dssp TTCSEEEEC
T ss_pred cCCCEEEeC
Confidence 999999764
No 137
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=79.57 E-value=2.1 Score=37.23 Aligned_cols=116 Identities=12% Similarity=0.152 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecc---------CCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCC
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAA---------WRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLD 170 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg---------~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~ 170 (348)
.+|+++.+... .-..++|+-. |-+ .....+.+.++++.+++.|+.+++-. .-+.+.++.-++.|.+
T Consensus 104 t~emi~ial~~---kP~~vtLVPEkreE~TTegGlD-v~~~~~~L~~~i~~L~~~GIrVSLFI-Dpd~~qI~aA~~~GAd 178 (278)
T 3gk0_A 104 TPEMLDIACEI---RPHDACLVPEKRSELTTEGGLD-VVGHFDAVRAACKQLADAGVRVSLFI-DPDEAQIRAAHETGAP 178 (278)
T ss_dssp SHHHHHHHHHH---CCSEEEECCCSGGGBCSSSSBC-TTTTHHHHHHHHHHHHHTTCEEEEEE-CSCHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHc---CCCEEEECCCCCCCcCCCcchh-hhccHHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcC
Confidence 46777665544 3567777632 111 12357889999999999999887666 3678899999999999
Q ss_pred eeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHH
Q psy8190 171 YYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRD 222 (348)
Q Consensus 171 ~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e 222 (348)
+|.+--+.-.+.+..-.....++.+.++.+.+++.|+.|+++ -|| .++..
T Consensus 179 ~IELhTG~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~VnAG--HGL~y~Nv~ 229 (278)
T 3gk0_A 179 VIELHTGRYADAHDAAEQQREFERIATGVDAGIALGLKVNAG--HGLHYTNVQ 229 (278)
T ss_dssp EEEECCHHHHTCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEC--TTCCTTTHH
T ss_pred EEEEecchhhccCCchhHHHHHHHHHHHHHHHHHcCCEEecC--CCCCHHHHH
Confidence 998743220010000001124556777788888999998876 445 44544
No 138
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=79.54 E-value=8 Score=34.94 Aligned_cols=53 Identities=15% Similarity=0.236 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEee
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGII 215 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~ 215 (348)
.+.++.|++.|++.|-+.+...|+ ....+.+..++.++.++++|+++..++-|
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~-----~g~~d~~~~~~~~~~ak~~Gl~v~ld~hy 82 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPS-----DGSYDLDYNLELAKRVKAAGMSLYLDLHL 82 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCT-----TCTTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred chHHHHHHHcCCCEEEEEEEECCC-----CCccCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 467899999999999986543222 11247899999999999999999888766
No 139
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=79.17 E-value=5.3 Score=36.64 Aligned_cols=77 Identities=14% Similarity=0.143 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCC---cccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhC-CCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELK---DRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVG-LDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~---~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG-~~~i~ 173 (348)
+.++....++.+.+.|+..|.+.++...+. .....+..++++.+++ .++.+.++.|..+.+.++.+.+.| +|.|.
T Consensus 244 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~ 323 (363)
T 3l5l_A 244 TLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVS 323 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEE
Confidence 456777778888888988888876532110 0011123455566665 367777676667888888888888 88887
Q ss_pred cc
Q psy8190 174 HN 175 (348)
Q Consensus 174 ~g 175 (348)
+|
T Consensus 324 iG 325 (363)
T 3l5l_A 324 VG 325 (363)
T ss_dssp CC
T ss_pred ec
Confidence 75
No 140
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=79.14 E-value=9.5 Score=34.23 Aligned_cols=63 Identities=14% Similarity=0.150 Sum_probs=44.9
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
++++++.+.|+..|.+... +++.+.++++.++. .+.+.++ |.++.+.+..+.+.|+|.+++|-
T Consensus 242 dea~eAl~aGaD~I~LDn~-------~~~~l~~av~~l~~-~v~ieaS-GGIt~~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 242 AELEEAISAGADIIMLDNF-------SLEMMREAVKINAG-RAALENS-GNITLDNLKECAETGVDYISVGA 304 (320)
T ss_dssp HHHHHHHHTTCSEEEEESC-------CHHHHHHHHHHHTT-SSEEEEE-SSCCHHHHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHcCCCEEEECCC-------CHHHHHHHHHHhCC-CCeEEEE-CCCCHHHHHHHHHcCCCEEEECc
Confidence 3444555678888877432 34677777777653 4555544 45899999999999999999864
No 141
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=79.13 E-value=5.9 Score=34.88 Aligned_cols=78 Identities=10% Similarity=0.075 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-c--CcEEEEecCCCCHHHHHHHHHhCCCeeeccC--
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-I--GLETCLTLGMLNENQAYRLKKVGLDYYNHNL-- 176 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~-- 176 (348)
++...+......|..-|++-++. ..... ++++.+++ . ++.+.+-.|..+.+.++.+.++|+|.|.+|=
T Consensus 187 ~~~aYa~~gad~G~~lV~LD~~~---~~v~~----e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAa 259 (286)
T 3vk5_A 187 EIDRYLHVARAFGFHMVYLYSRN---EHVPP----EVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGAL 259 (286)
T ss_dssp HHHHHHHHHHHTTCSEEEEECSS---SCCCH----HHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGG
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC---CcCCH----HHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchh
Confidence 34677777777899999887653 12233 55555554 4 6889989999999999999999999999863
Q ss_pred CCC--HHHHhcc
Q psy8190 177 DTS--PKLYGDI 186 (348)
Q Consensus 177 et~--~e~l~~i 186 (348)
..+ ++..+.+
T Consensus 260 v~d~~Pelv~e~ 271 (286)
T 3vk5_A 260 EQPDWRSALAEI 271 (286)
T ss_dssp SSTTHHHHHHHH
T ss_pred hcCCCHHHHHHH
Confidence 224 4555444
No 142
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=78.23 E-value=36 Score=30.06 Aligned_cols=123 Identities=11% Similarity=0.054 Sum_probs=75.5
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--C--cEEEEecC-CCCHHHHHHHHHhCCCee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--G--LETCLTLG-MLNENQAYRLKKVGLDYY 172 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~--~~i~~~~g-~l~~e~l~~Lk~aG~~~i 172 (348)
.+++++++.++.+.+.|++.|.+.+. .. ...+..+.++++.+++. + +.++.+.+ -+.......-.++|++.|
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT--~G-~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~v 232 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDT--IG-VGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVF 232 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEES--SS-CCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC--CC-CcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEE
Confidence 46899999999999999999999753 11 23567888999999863 2 34455333 344444555557999999
Q ss_pred eccCCC-CHHHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 173 NHNLDT-SPKLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 173 ~~g~et-~~e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
...+-. ..--|..=+.+ -..++.+..++ ..|+.+ |-+.+.+.+..+++.+.
T Consensus 233 d~tv~GlG~cp~a~gr~GN~~~E~lv~~l~---~~g~~~--------~idl~~l~~~~~~~~~~ 285 (302)
T 2ftp_A 233 DSSVAGLGGCPYAKGATGNVASEDVLYLLN---GLEIHT--------GVDMHALVDAGQRICAV 285 (302)
T ss_dssp EEBGGGCCBCGGGTTCBCBCBHHHHHHHHH---HTTCBC--------CCCHHHHHHHHHHHHHH
T ss_pred EecccccCCCCCCCCCCCChhHHHHHHHHH---hcCCCC--------CcCHHHHHHHHHHHHHH
Confidence 876644 22112211112 35666665555 356554 22456666666665554
No 143
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=77.97 E-value=27 Score=28.61 Aligned_cols=163 Identities=12% Similarity=0.086 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh----cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK----IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~----~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
+..+.++.+.+.|++.+.+.-. ..+.+.+.++++.+++ .++.+.++ +.++.+.++|++.+.++..
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~-----~~~~~~~~~~~~~l~~~~~~~~v~v~v~------~~~~~a~~~gad~v~l~~~ 95 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIK-----NAPTREMYEIGKTLRQLTREYDALFFVD------DRVDVALAVDADGVQLGPE 95 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCC-----SCCHHHHHHHHHHHHHHHHHTTCEEEEE------SCHHHHHHHTCSEEEECTT
T ss_pred hHHHHHHHHHHCCCCEEEECCC-----CCCHHHHHHHHHHHHHHHHHcCCeEEEc------ChHHHHHHcCCCEEEECCc
Confidence 4455566677889998877532 1233444555555543 36666665 4467889999999976532
Q ss_pred CCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCC
Q psy8190 178 TSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG 256 (348)
Q Consensus 178 t~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~ 256 (348)
.. ..+ .++.+. .+ +++|+ -.|.++.. .+.+.+ .+.+.+.+..|..+.+ .
T Consensus 96 ~~-----------~~~----~~~~~~-~~------~~~~v~~~t~~e~~----~~~~~g--~d~i~~~~~~~~~~~~--~ 145 (215)
T 1xi3_A 96 DM-----------PIE----VAKEIA-PN------LIIGASVYSLEEAL----EAEKKG--ADYLGAGSVFPTKTKE--D 145 (215)
T ss_dssp SC-----------CHH----HHHHHC-TT------SEEEEEESSHHHHH----HHHHHT--CSEEEEECSSCC------C
T ss_pred cC-----------CHH----HHHHhC-CC------CEEEEecCCHHHHH----HHHhcC--CCEEEEcCCccCCCCC--C
Confidence 21 111 122222 23 34444 45766643 234566 7888776654432211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 257 SSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 257 ~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
.. +...+.++ ..+... +..+-+.+|- + ..+. ...+.+||+.+..|..+.
T Consensus 146 ~~-~~~~~~l~---~l~~~~-~~pvia~GGI-~-~~nv-~~~~~~Ga~gv~vgs~i~ 194 (215)
T 1xi3_A 146 AR-VIGLEGLR---KIVESV-KIPVVAIGGI-N-KDNA-REVLKTGVDGIAVISAVM 194 (215)
T ss_dssp CC-CCHHHHHH---HHHHHC-SSCEEEESSC-C-TTTH-HHHHTTTCSEEEESHHHH
T ss_pred CC-CcCHHHHH---HHHHhC-CCCEEEECCc-C-HHHH-HHHHHcCCCEEEEhHHHh
Confidence 12 22233322 222223 3233334432 2 1233 335678999998776543
No 144
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=77.71 E-value=9.1 Score=32.68 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=57.8
Q ss_pred HHHHHHHhCCCCEEEEeccCCC--CCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHH
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRE--LKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPK 181 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~--~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e 181 (348)
+.++.+.+.|+..|++.+.... ....++ ++++.+++ .++++.++.|.-+.+.+..+.++|++.+-+|= .
T Consensus 155 e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~----~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGs----a 226 (253)
T 1thf_D 155 DWVVEVEKRGAGEILLTSIDRDGTKSGYDT----EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAAS----V 226 (253)
T ss_dssp HHHHHHHHTTCSEEEEEETTTTTSCSCCCH----HHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEESH----H
T ss_pred HHHHHHHHCCCCEEEEEeccCCCCCCCCCH----HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHHH----H
Confidence 3344555689999887643111 112233 44555554 47888888888888999999999999987642 2
Q ss_pred HHhccCCCCCHHHHHHHHHHHHHcCCeeeE
Q psy8190 182 LYGDIISTRDYENRLNTLKNVRNVGINICC 211 (348)
Q Consensus 182 ~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~ 211 (348)
++. ...++++ +++.+++.|+.+..
T Consensus 227 l~~---~~~~~~~---~~~~l~~~g~~~~~ 250 (253)
T 1thf_D 227 FHF---REIDVRE---LKEYLKKHGVNVRL 250 (253)
T ss_dssp HHT---TCSCHHH---HHHHHHHTTCCCCC
T ss_pred HHc---CCCCHHH---HHHHHHHcCCcccc
Confidence 332 1224444 45556778887653
No 145
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=77.60 E-value=5.1 Score=35.18 Aligned_cols=63 Identities=14% Similarity=0.035 Sum_probs=40.5
Q ss_pred hCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 112 SDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 112 ~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+.|++.|-+++-.......+++.+.++.+.+.. ++.+.+..|.-+.+.+..+.++|++.+.+|
T Consensus 180 ~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~-~~pvVaegGI~t~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 180 KAGAKVIGVNARDLMTLDVDRDCFARIAPGLPS-SVIRIAESGVRGTADLLAYAGAGADAVLVG 242 (272)
T ss_dssp HHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCT-TSEEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HCCCCEEEECCCcccccccCHHHHHHHHHhCcc-cCEEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 457777766643211112344444444333221 577777788888999999999999999876
No 146
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=77.45 E-value=43 Score=30.58 Aligned_cols=154 Identities=18% Similarity=0.178 Sum_probs=85.3
Q ss_pred cHHHHHHHHHHHHhc-CcEEEEecC--CCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHc--
Q psy8190 131 DLDNIENMICEVKKI-GLETCLTLG--MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV-- 205 (348)
Q Consensus 131 ~~~~~~~l~~~i~~~-~~~i~~~~g--~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~-- 205 (348)
+.+.+.+.++.+++. .+.+.+..+ ....+.++.+.++|++.|.+.. . .+ ..+.+++.++.+++.
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idt--a--------~G-~~~~~~~~I~~ik~~~p 148 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDS--S--------HG-HSEGVLQRIRETRAAYP 148 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEEC--S--------CT-TSHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeC--C--------CC-CCHHHHHHHHHHHHhcC
Confidence 567888888888874 233444433 4568999999999999887532 1 01 235677888888886
Q ss_pred CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCC-----CCCCCHHHHHHHHHHHHHHCCCCc
Q psy8190 206 GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG-----SSILDPLEFIRTIAVARITMPTSR 280 (348)
Q Consensus 206 G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~-----~~~~~~~~~~~~~a~~R~~lp~~~ 280 (348)
++.+ +.|-.-|.++. +.+.+.+ .+.+.+. ..||+.... ...+....+.++...++. .+..
T Consensus 149 ~v~V----i~G~v~t~e~A----~~a~~aG--AD~I~vG---~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~--~~iP 213 (366)
T 4fo4_A 149 HLEI----IGGNVATAEGA----RALIEAG--VSAVKVG---IGPGSICTTRIVTGVGVPQITAIADAAGVANE--YGIP 213 (366)
T ss_dssp TCEE----EEEEECSHHHH----HHHHHHT--CSEEEEC---SSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGG--GTCC
T ss_pred CCce----EeeeeCCHHHH----HHHHHcC--CCEEEEe---cCCCCCCCcccccCcccchHHHHHHHHHHHhh--cCCe
Confidence 4444 33433465543 4455677 7888763 134443211 112222222222222221 1222
Q ss_pred eeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 281 IRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 281 i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
+-+++|-.+ ...-..++.+||+.++.|..+
T Consensus 214 VIA~GGI~~--~~di~kala~GAd~V~vGs~f 243 (366)
T 4fo4_A 214 VIADGGIRF--SGDISKAIAAGASCVMVGSMF 243 (366)
T ss_dssp EEEESCCCS--HHHHHHHHHTTCSEEEESTTT
T ss_pred EEEeCCCCC--HHHHHHHHHcCCCEEEEChHh
Confidence 333333222 233456888999999877544
No 147
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=77.16 E-value=36 Score=29.62 Aligned_cols=184 Identities=14% Similarity=0.093 Sum_probs=99.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc----------------ccHHHHHHHHHHHHhc--CcEEEE----ecC--
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD----------------RDLDNIENMICEVKKI--GLETCL----TLG-- 154 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~----------------~~~~~~~~l~~~i~~~--~~~i~~----~~g-- 154 (348)
+.+.-++.++.+.+.|++-+-++--..+|.. ...+.+.++++.+++. .+++-+ |+-
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 4566777777888889888877533212210 1123667888888863 445433 221
Q ss_pred CCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 155 MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 155 ~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
.=.+..++.++++|++.+.+. ...+++..+..+.++++|+.. -+++. ..|.+++... +.+.
T Consensus 112 ~g~~~f~~~~~~aGvdGvIip-------------Dlp~ee~~~~~~~~~~~gl~~--I~lva-p~t~~eri~~---i~~~ 172 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLIA-------------DVPTNESQPFVAAAEKFGIQP--IFIAP-PTASDETLRA---VAQL 172 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEET-------------TSCGGGCHHHHHHHHHTTCEE--EEEEC-TTCCHHHHHH---HHHH
T ss_pred HhHHHHHHHHHHCCCCEEEEC-------------CCCHHHHHHHHHHHHHcCCeE--EEEEC-CCCCHHHHHH---HHHH
Confidence 112568999999999997652 223355667788889999974 11222 3343433333 3344
Q ss_pred CCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCe
Q psy8190 235 NPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDK 311 (348)
Q Consensus 235 ~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~ 311 (348)
. ...+......-.-|+. ...+ .....++...|...+ ..+-+..|-.+ ++....++.+|||.++.|.-
T Consensus 173 ~--~gfiY~vs~~GvTG~~----~~~~-~~~~~~v~~vr~~~~-~Pv~vGfGIst--~e~~~~~~~~gADgvIVGSA 239 (271)
T 3nav_A 173 G--KGYTYLLSRAGVTGAE----TKAN-MPVHALLERLQQFDA-PPALLGFGISE--PAQVKQAIEAGAAGAISGSA 239 (271)
T ss_dssp C--CSCEEECCCC------------CC-HHHHHHHHHHHHTTC-CCEEECSSCCS--HHHHHHHHHTTCSEEEESHH
T ss_pred C--CCeEEEEeccCCCCcc----cCCc-hhHHHHHHHHHHhcC-CCEEEECCCCC--HHHHHHHHHcCCCEEEECHH
Confidence 4 3343322222222321 1112 345666777776653 22323322111 33333378899999988864
No 148
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=77.13 E-value=38 Score=29.81 Aligned_cols=180 Identities=12% Similarity=0.109 Sum_probs=109.7
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecC----CCCH----HHHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLG----MLNE----NQAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g----~l~~----e~l~~Lk~aG 168 (348)
..+.++|.+.++++.+.|+..||+.-+ ++....+.++..++.+++-.| ..+. ...+...+.|
T Consensus 70 ~~T~~dI~~lc~eA~~~g~aaVCV~P~----------~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~G 139 (288)
T 3oa3_A 70 SATGSQIDVLCAEAKEYGFATVCVRPD----------YVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNG 139 (288)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEECGG----------GHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECHH----------HHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 367899999999999999999988321 222233344555677765443 2332 2455566679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHc-CCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeeccc-
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV-GINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINN- 245 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~-G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~- 245 (348)
.+-|.+-+.- ..++ ...++...+-++.++++ +-. ..-+|+-- --|.+++....+...+.+ .|.|.-+.
T Consensus 140 AdEIDmVINi--g~lk----~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaG--ADfVKTSTG 210 (288)
T 3oa3_A 140 ASELDMVMNY--PWLS----EKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAG--ADYVKTSTG 210 (288)
T ss_dssp CSEEEEECCH--HHHH----TTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTT--CSEEECCCS
T ss_pred CCEEEEEeeh--hhhc----CCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcC--CCEEEcCCC
Confidence 9988753311 1111 34667777777777664 322 24455544 347788888888888888 88887653
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCccee
Q psy8190 246 LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSI 306 (348)
Q Consensus 246 l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~ 306 (348)
|. ....+.+...-|-.+.+..-+...|.+++|-.+. +.....+.+||+.+
T Consensus 211 f~---------~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~--edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 211 FN---------GPGASIENVSLMSAVCDSLQSETRVKASGGIRTI--EDCVKMVRAGAERL 260 (288)
T ss_dssp SS---------SCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred CC---------CCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCH--HHHHHHHHcCCcee
Confidence 32 1234555544444444332345677788774442 44555788999987
No 149
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=77.08 E-value=37 Score=32.92 Aligned_cols=219 Identities=16% Similarity=0.056 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCC-cccHHHHHHHHHHHHh-cCcEEEEecCCCCH-----------HHHHHHHHh
Q psy8190 101 ESVITAAQKAKSDGATRFCMGAAWRELK-DRDLDNIENMICEVKK-IGLETCLTLGMLNE-----------NQAYRLKKV 167 (348)
Q Consensus 101 eei~~~~~~~~~~G~~~i~l~gg~~~~~-~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~-----------e~l~~Lk~a 167 (348)
.+.++.++.+.+.|++.+++..-+.... ........++++.+.+ .++++.+-.|..+. +.++.+.++
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~a 359 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRS 359 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHc
Confidence 4667777788888999987764311110 1112235677777766 47788877776665 779999999
Q ss_pred CCCeeeccCCCCH---HHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEe------------------------------
Q psy8190 168 GLDYYNHNLDTSP---KLYGDIISTRDYENRLNTLKNVRNVGINICCGGI------------------------------ 214 (348)
Q Consensus 168 G~~~i~~g~et~~---e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i------------------------------ 214 (348)
|++.|.+|-.... +.+++=....+.+.+.+..+..-+.-+-+.++.-
T Consensus 360 Gad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (555)
T 1jvn_A 360 GADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWY 439 (555)
T ss_dssp TCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEE
T ss_pred CCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeE
Confidence 9999998754411 2222211112233333333322110133333321
Q ss_pred --e--ec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccc
Q psy8190 215 --I--GL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKE 289 (348)
Q Consensus 215 --~--Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~ 289 (348)
+ |. ..|.-+..+.++.+.+++ .+.+-+.... ..||. ..++. +.++.+. ... +..+-+++|-.+
T Consensus 440 ~v~~~Gw~~~~~~~~~e~a~~~~~~G--a~~il~t~~~-~dG~~----~G~d~-~li~~l~---~~~-~iPVIasGGi~s 507 (555)
T 1jvn_A 440 QCTIKGGRESRDLGVWELTRACEALG--AGEILLNCID-KDGSN----SGYDL-ELIEHVK---DAV-KIPVIASSGAGV 507 (555)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHHHTT--CCEEEECCGG-GTTTC----SCCCH-HHHHHHH---HHC-SSCEEECSCCCS
T ss_pred EEEEecCccCCCCCHHHHHHHHHHcC--CCEEEEeCCC-CCCCC----CCCCH-HHHHHHH---HhC-CccEEEECCCCC
Confidence 1 11 011123456677778887 7777543322 23442 12332 2333222 222 222334544333
Q ss_pred cchhhHHHHHH-hCcceeeeCCeeccCCCCCchHHHHHHHHcCCCc
Q psy8190 290 MGETTQAFCFL-AGANSIFYGDKLLTTDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 290 l~~~~~~~~l~-~GAn~~~~~~~~~~~~g~~~~~~~~~i~~~G~~p 334 (348)
. +.-..++. .||+.++.|.-+ ....-...+..+.+++.|..+
T Consensus 508 ~--~d~~~~~~~~G~~gvivg~a~-~~~~~~~~e~~~~l~~~gi~~ 550 (555)
T 1jvn_A 508 P--EHFEEAFLKTRADACLGAGMF-HRGEFTVNDVKEYLLEHGLKV 550 (555)
T ss_dssp H--HHHHHHHHHSCCSEEEESHHH-HTTSCCHHHHHHHHHHTTCCC
T ss_pred H--HHHHHHHHhcCChHHHHHHHH-HcCCCCHHHHHHHHHHCCCcc
Confidence 2 22233454 799999877532 333334678888899988743
No 150
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=77.06 E-value=35 Score=29.37 Aligned_cols=201 Identities=13% Similarity=0.060 Sum_probs=106.5
Q ss_pred CHHHHHHHHHHHHh-CCC--CEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEE----------ecCCCCHHHHHHHH
Q psy8190 99 SIESVITAAQKAKS-DGA--TRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL----------TLGMLNENQAYRLK 165 (348)
Q Consensus 99 ~~eei~~~~~~~~~-~G~--~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~----------~~g~l~~e~l~~Lk 165 (348)
+..+..+.++.+.. ..- .++.+. |+...+.. +.+.++..++.+.+ ..|.++ ...|+
T Consensus 15 ~~~~~~~~~~~l~~~~~~~~vev~v~-----Pp~~~L~~---v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS---~~mL~ 83 (250)
T 1yya_A 15 TPSEARVWFAELKRLLPPLQSEAAVL-----PAFPILPV---AKEVLAETQVGYGAQDVSAHKEGAYTGEVS---ARMLS 83 (250)
T ss_dssp CHHHHHHHHHHHHHHCCCCSSEEEEE-----CCGGGHHH---HHHHHTTSSCEEEESCCCSSSSBSCTTCCC---HHHHH
T ss_pred CHHHHHHHHHHHHhhccccCceEEEe-----CCHHHHHH---HHHHhcCCCCeEEeccCCCCCCCCccCcCC---HHHHH
Confidence 55666666665543 211 345442 33333333 33444433455543 245555 56789
Q ss_pred HhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHH---------HHHH-HHhcC
Q psy8190 166 KVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAE---------LIFQ-LANLN 235 (348)
Q Consensus 166 ~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~---------~l~~-l~~l~ 235 (348)
++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++.. -+.. +..+.
T Consensus 84 d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGE~leere~g~t~~vv~~Ql~~~l~~~~ 154 (250)
T 1yya_A 84 DLGCRYAIVGH----SERRRYH-GETDALVAEKAKRLLEEGITP----ILCVGEPLEVREKGEAVPYTLRQLRGSLEGVE 154 (250)
T ss_dssp HTTCSEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred HcCCCEEEeCc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCC
Confidence 99999999876 2222221 346777788899999999964 3334788765332 1221 12232
Q ss_pred CCCCeee--ccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-------Ccee-ccccccccchhhHHHHHHhCc
Q psy8190 236 PYPESVP--INNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT-------SRIR-MSAGRKEMGETTQAFCFLAGA 303 (348)
Q Consensus 236 ~~~~~i~--~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-------~~i~-~s~g~~~l~~~~~~~~l~~GA 303 (348)
++.+. +-.|-|. =||. ..++++..-++.+..|..+.. ..++ +.+|-.+- .+...+.-..++
T Consensus 155 --~~~~~~vvIAYEPvWAIGTG----~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~di 227 (250)
T 1yya_A 155 --PPGPEALVIAYEPVWAIGTG----KNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNP-KNFADLLSMPNV 227 (250)
T ss_dssp --CSSGGGCEEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCT-TTHHHHHTSTTC
T ss_pred --HHHcCcEEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCH-HHHHHHHcCCCC
Confidence 23110 1123332 2443 457899999999999976531 1244 23333332 233333334589
Q ss_pred ceeeeCCeeccCCCCCchHHHHHHHHcC
Q psy8190 304 NSIFYGDKLLTTDNTKTNDDSKLLKKLG 331 (348)
Q Consensus 304 n~~~~~~~~~~~~g~~~~~~~~~i~~~G 331 (348)
|+++.|. +.-.+++..++++..|
T Consensus 228 DG~LVGg-----AsL~a~~F~~ii~~~~ 250 (250)
T 1yya_A 228 DGGLVGG-----ASLELESFLALLRIAG 250 (250)
T ss_dssp CEEEESG-----GGSSHHHHHHHHHHHC
T ss_pred CeeEeeH-----HHhChHHHHHHHHhcC
Confidence 9987654 2223455666666544
No 151
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=76.99 E-value=31 Score=28.71 Aligned_cols=177 Identities=7% Similarity=-0.025 Sum_probs=91.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEE--EecCCCCHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETC--LTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~--~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
.+.++.++.++.+ ..|+.-+-++- + .....=.++++.+++. +..+- ++........++.+.++|++.+.
T Consensus 16 ~~~~~~~~~~~~~-~~~vd~ie~g~----~--~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~ 88 (218)
T 3jr2_A 16 TNLTDAVAVASNV-ASYVDVIEVGT----I--LAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWIT 88 (218)
T ss_dssp SSHHHHHHHHHHH-GGGCSEEEECH----H--HHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHh-cCCceEEEeCc----H--HHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEE
Confidence 4577777777765 44666554421 1 1122234567777654 33332 33333334568999999999998
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeec-ccccccCCC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPI-NNLVQIKGT 252 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~-~~l~P~~gT 252 (348)
+-.++.+ +...++++.+++.|+....+ ++|. .|.++..+ +.+.+ .+.+.+ ....|. +
T Consensus 89 vh~~~~~------------~~~~~~~~~~~~~g~~~~~d-~l~~-~T~~~~~~----~~~~g--~d~v~~~~~~~~~--~ 146 (218)
T 3jr2_A 89 VSAAAHI------------ATIAACKKVADELNGEIQIE-IYGN-WTMQDAKA----WVDLG--ITQAIYHRSRDAE--L 146 (218)
T ss_dssp EETTSCH------------HHHHHHHHHHHHHTCEEEEE-CCSS-CCHHHHHH----HHHTT--CCEEEEECCHHHH--H
T ss_pred EecCCCH------------HHHHHHHHHHHHhCCcccee-eeec-CCHHHHHH----HHHcC--ccceeeeeccccc--c
Confidence 6554432 22345677778888765433 4454 36543332 33445 666544 222221 1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 253 PLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 253 ~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.. ...++.+.-++ ...+- ++..+.+.+|- .++....++.+|||.++.|..+
T Consensus 147 --~g-~~~~~~~l~~i-~~~~~--~~~pi~v~GGI---~~~~~~~~~~aGAd~vvvGsaI 197 (218)
T 3jr2_A 147 --AG-IGWTTDDLDKM-RQLSA--LGIELSITGGI---VPEDIYLFEGIKTKTFIAGRAL 197 (218)
T ss_dssp --HT-CCSCHHHHHHH-HHHHH--TTCEEEEESSC---CGGGGGGGTTSCEEEEEESGGG
T ss_pred --CC-CcCCHHHHHHH-HHHhC--CCCCEEEECCC---CHHHHHHHHHcCCCEEEEchhh
Confidence 01 11233333332 22221 23334444432 1233344789999999888644
No 152
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=76.26 E-value=31 Score=28.39 Aligned_cols=158 Identities=10% Similarity=0.077 Sum_probs=93.4
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecC-----CCCHHHHHHHHHh-CCCe
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLG-----MLNENQAYRLKKV-GLDY 171 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g-----~l~~e~l~~Lk~a-G~~~ 171 (348)
++.+++.+ +.+..++.+++.+| + ...+.++++.+++.+-.+.++++ .-+++-++.|++. +.+.
T Consensus 17 r~~~~l~~----al~s~~~~ifll~g--~-----i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdG 85 (192)
T 3kts_A 17 HNQKDMEK----ILELDLTYMVMLET--H-----VAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDG 85 (192)
T ss_dssp SSSHHHHH----HTTSSCCEEEECSE--E-----TTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSE
T ss_pred cCHHHHHH----HHcCCCCEEEEecC--c-----HHHHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCCE
Confidence 45555543 33445777777666 2 24678888889887766666654 2356677888874 6665
Q ss_pred eeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCC
Q psy8190 172 YNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKG 251 (348)
Q Consensus 172 i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~g 251 (348)
+- . .....++.+++.|+.+-.. +| +-+ -..+...++.+.+.+ ||.+-+. ||
T Consensus 86 II---s----------------Tk~~~i~~Ak~~gL~tIqR-~F-liD-S~al~~~~~~i~~~~--PD~iEiL-----PG 136 (192)
T 3kts_A 86 II---S----------------TRGNAIMKAKQHKMLAIQR-LF-MID-SSAYNKGVALIQKVQ--PDCIELL-----PG 136 (192)
T ss_dssp EE---E----------------SCHHHHHHHHHTTCEEEEE-EE-CCS-HHHHHHHHHHHHHHC--CSEEEEE-----CT
T ss_pred EE---e----------------CcHHHHHHHHHCCCeEEEE-EE-EEE-cchHHHHHHHHhhcC--CCEEEEC-----Cc
Confidence 54 1 2235688999999965443 22 211 234556677778887 8877443 44
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCC
Q psy8190 252 TPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGD 310 (348)
Q Consensus 252 T~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~ 310 (348)
+-+ +++...+....-..| + +|--. ..+....++.+||+.+..+.
T Consensus 137 --------i~p----~iI~~i~~~~~~PiI-a-GGlI~-~~edv~~al~aGA~aVsTs~ 180 (192)
T 3kts_A 137 --------IIP----EQVQKMTQKLHIPVI-A-GGLIE-TSEQVNQVIASGAIAVTTSN 180 (192)
T ss_dssp --------TCH----HHHHHHHHHHCCCEE-E-ESSCC-SHHHHHHHHTTTEEEEEECC
T ss_pred --------hhH----HHHHHHHHhcCCCEE-E-ECCcC-CHHHHHHHHHcCCeEEEeCC
Confidence 122 344444444332222 2 22211 14556678999999997765
No 153
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=75.68 E-value=9.2 Score=33.52 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=35.3
Q ss_pred ccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 130 RDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 130 ~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+++...++++.+.. +..+.+..|..+++.++.++++|++.+.+|
T Consensus 205 ~dl~~~~~L~~~ip~-~~~vIaesGI~t~edv~~l~~~Ga~gvLVG 249 (272)
T 3tsm_A 205 VNLAVSERLAKMAPS-DRLLVGESGIFTHEDCLRLEKSGIGTFLIG 249 (272)
T ss_dssp BCTHHHHHHHHHSCT-TSEEEEESSCCSHHHHHHHHTTTCCEEEEC
T ss_pred CChHHHHHHHHhCCC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 355666666665543 567777888899999999999999999876
No 154
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=75.67 E-value=36 Score=28.81 Aligned_cols=171 Identities=11% Similarity=-0.011 Sum_probs=93.8
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEE-Ee----cC---C--CCHHHHHHHH
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETC-LT----LG---M--LNENQAYRLK 165 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~-~~----~g---~--l~~e~l~~Lk 165 (348)
..+++.+.+.++.+.+.|..-+..++ .+.++.+++ .++++- .+ .| . -+.+.++.++
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~~~-------------~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~ 98 (232)
T 3igs_A 32 LDKPEIVAAMALAAEQAGAVAVRIEG-------------IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALA 98 (232)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEEES-------------HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHCCCeEEEECC-------------HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHH
Confidence 35678888888888888988775421 134566665 355542 22 11 1 2456889999
Q ss_pred HhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccc
Q psy8190 166 KVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINN 245 (348)
Q Consensus 166 ~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~ 245 (348)
++|+|.+.++.-. . .+++...+.++.+++.|+.+..+. .|.++ +..+.+.+ .+.+.+..
T Consensus 99 ~~Gad~V~l~~~~-------~---~~p~~l~~~i~~~~~~g~~v~~~v-----~t~ee----a~~a~~~G--ad~Ig~~~ 157 (232)
T 3igs_A 99 QAGAAIIAVDGTA-------R---QRPVAVEALLARIHHHHLLTMADC-----SSVDD----GLACQRLG--ADIIGTTM 157 (232)
T ss_dssp HHTCSEEEEECCS-------S---CCSSCHHHHHHHHHHTTCEEEEEC-----CSHHH----HHHHHHTT--CSEEECTT
T ss_pred HcCCCEEEECccc-------c---CCHHHHHHHHHHHHHCCCEEEEeC-----CCHHH----HHHHHhCC--CCEEEEcC
Confidence 9999999864421 0 111234455666777777654442 35444 34556777 88886533
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 246 LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 246 l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.-..+++. ...++.+...+ .+.. +..+-..+|-.+ ++....++.+||+.++.|..+
T Consensus 158 ~g~t~~~~---~~~~~~~~i~~----l~~~--~ipvIA~GGI~t--~~d~~~~~~~GadgV~VGsal 213 (232)
T 3igs_A 158 SGYTTPDT---PEEPDLPLVKA----LHDA--GCRVIAEGRYNS--PALAAEAIRYGAWAVTVGSAI 213 (232)
T ss_dssp TTSSSSSC---CSSCCHHHHHH----HHHT--TCCEEEESCCCS--HHHHHHHHHTTCSEEEECHHH
T ss_pred ccCCCCCC---CCCCCHHHHHH----HHhc--CCcEEEECCCCC--HHHHHHHHHcCCCEEEEehHh
Confidence 21112221 12233332222 2221 322323333222 344455778899999988654
No 155
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=75.59 E-value=44 Score=29.73 Aligned_cols=155 Identities=12% Similarity=0.046 Sum_probs=90.8
Q ss_pred ecCCCCHHHHHHHHHhCCCeeec-cCCCCHHHHhccCC-CCCHHHHHHHHHHHHHc---CCeeeEeEeeecCCCHHHHHH
Q psy8190 152 TLGMLNENQAYRLKKVGLDYYNH-NLDTSPKLYGDIIS-TRDYENRLNTLKNVRNV---GINICCGGIIGLSESRDQRAE 226 (348)
Q Consensus 152 ~~g~l~~e~l~~Lk~aG~~~i~~-g~et~~e~l~~i~~-~~~~~~~~~~i~~~~~~---G~~i~~~~i~Glget~e~~~~ 226 (348)
-++..+.-..+.+.++|++.+.+ |...+...+-.-.. .-+.++.+..++...+. .+++.+++=.|+| ++++..+
T Consensus 29 ~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg-~~~~v~~ 107 (307)
T 3lye_A 29 CPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYG-GPIMVAR 107 (307)
T ss_dssp EEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSS-SHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCC-CHHHHHH
Confidence 35667788888999999999986 22212122211111 24889999888888764 3788999988987 4888999
Q ss_pred HHHHHHhcCCCCCeeecccc-cccCCCCCCCCCCCCHHHHHHHHHHHHHHC----CCCceec--cccc-cccc--hhhHH
Q psy8190 227 LIFQLANLNPYPESVPINNL-VQIKGTPLYGSSILDPLEFIRTIAVARITM----PTSRIRM--SAGR-KEMG--ETTQA 296 (348)
Q Consensus 227 ~l~~l~~l~~~~~~i~~~~l-~P~~gT~l~~~~~~~~~~~~~~~a~~R~~l----p~~~i~~--s~g~-~~l~--~~~~~ 296 (348)
+++.+.+.+ ...+.+-=- .|..-.-+...+..+.++...-+..+|..- ++.-|.+ -.-. ..+. -.-..
T Consensus 108 ~v~~l~~aG--aagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ 185 (307)
T 3lye_A 108 TVEHYIRSG--VAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLR 185 (307)
T ss_dssp HHHHHHHTT--CCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHH
T ss_pred HHHHHHHcC--CeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHH
Confidence 999998887 666655221 222211122334567788777776666542 3333321 1100 0011 11223
Q ss_pred HHHHhCcceeeeC
Q psy8190 297 FCFLAGANSIFYG 309 (348)
Q Consensus 297 ~~l~~GAn~~~~~ 309 (348)
....+|||.++..
T Consensus 186 ay~eAGAD~ifi~ 198 (307)
T 3lye_A 186 AARDEGADVGLLE 198 (307)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHHCCCCEEEec
Confidence 3467999999764
No 156
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=75.35 E-value=21 Score=31.99 Aligned_cols=78 Identities=13% Similarity=-0.027 Sum_probs=56.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCC---------------Cc-ccHHHHHHHHHHHHh-c--CcEEEEecCCCCH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWREL---------------KD-RDLDNIENMICEVKK-I--GLETCLTLGMLNE 158 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~---------------~~-~~~~~~~~l~~~i~~-~--~~~i~~~~g~l~~ 158 (348)
.+.+++.+.++.+.+.|++.|.+++++... +. .......+.++.+++ . ++++..+.|..+.
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~ 301 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSV 301 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 455688888888889999999887542100 00 012344566677765 3 6888889999999
Q ss_pred HHHHHHHHhCCCeeecc
Q psy8190 159 NQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g 175 (348)
+.+..+.++|++.|.++
T Consensus 302 ~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 302 IAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHCCCCEEEee
Confidence 99998889999999875
No 157
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=75.33 E-value=8 Score=34.33 Aligned_cols=65 Identities=14% Similarity=0.210 Sum_probs=46.2
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et 178 (348)
++++++.+.|++.|.+.. . +.+.+.+.++.++. .+.+.++ |.++.+.+..+.+.|+|.|++|-=|
T Consensus 218 ~e~~eAl~aGaDiImLDn----~---s~~~l~~av~~~~~-~v~leaS-GGIt~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 218 SQVEESLSNNVDMILLDN----M---SISEIKKAVDIVNG-KSVLEVS-GCVNIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp HHHHHHHHTTCSEEEEES----C---CHHHHHHHHHHHTT-SSEEEEE-SSCCTTTHHHHHTTTCSEEECGGGT
T ss_pred HHHHHHHHcCCCEEEECC----C---CHHHHHHHHHhhcC-ceEEEEE-CCCCHHHHHHHHHcCCCEEEeCccc
Confidence 444455667888877732 2 34788888887764 3555544 4588899999999999999987533
No 158
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=75.08 E-value=16 Score=30.83 Aligned_cols=91 Identities=12% Similarity=0.086 Sum_probs=54.7
Q ss_pred HHHHHhCCCCEEEEeccCC--CCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHh
Q psy8190 107 AQKAKSDGATRFCMGAAWR--ELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYG 184 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~--~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~ 184 (348)
++.+.+.|+..|.+.+-.. .....+.+.+.++.+. .++++.++.|.-+.+.+..+.++|++.+-+|= .+++
T Consensus 160 ~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~---~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgs----al~~ 232 (253)
T 1h5y_A 160 AKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS---VRIPVIASGGAGRVEHFYEAAAAGADAVLAAS----LFHF 232 (253)
T ss_dssp HHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH---CSSCEEEESCCCSHHHHHHHHHTTCSEEEESH----HHHT
T ss_pred HHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh---cCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHH----HHHc
Confidence 3455567899987754311 1112234444333322 36788888888888888888899999987652 3332
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCeee
Q psy8190 185 DIISTRDYENRLNTLKNVRNVGINIC 210 (348)
Q Consensus 185 ~i~~~~~~~~~~~~i~~~~~~G~~i~ 210 (348)
...+.+ +..+.+++.|+.+.
T Consensus 233 ---~~~~~~---~~~~~l~~~g~~~~ 252 (253)
T 1h5y_A 233 ---RVLSIA---QVKRYLKERGVEVR 252 (253)
T ss_dssp ---TSSCHH---HHHHHHHHTTCBCC
T ss_pred ---CCCCHH---HHHHHHHHcCCCCC
Confidence 122344 44555677888653
No 159
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=74.76 E-value=4.1 Score=38.25 Aligned_cols=63 Identities=13% Similarity=0.072 Sum_probs=42.7
Q ss_pred HHHHHHHhCCCeeeccC--CC-C-----HHHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHH
Q psy8190 160 QAYRLKKVGLDYYNHNL--DT-S-----PKLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRD 222 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~--et-~-----~e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e 222 (348)
.+..|++.|++.|.+.. ++ + ..-|..+.+. .+.++..+.++.||+.|+.|..++++.+ +....
T Consensus 28 ~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~~ 100 (441)
T 1lwj_A 28 AVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFLHT 100 (441)
T ss_dssp THHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCCTTCH
T ss_pred hhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcccCchH
Confidence 45666666666666542 11 1 1112244443 3889999999999999999999999999 65433
No 160
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=74.20 E-value=48 Score=29.56 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=42.5
Q ss_pred HHHHHHhCCCCEEEEeccCC-CCCc-----ccHHHHHHHHHHHHhc-CcEEEEe-cCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 106 AAQKAKSDGATRFCMGAAWR-ELKD-----RDLDNIENMICEVKKI-GLETCLT-LGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~-~~~~-----~~~~~~~~l~~~i~~~-~~~i~~~-~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.++...+.|+..|.+...+. ..++ .-.+++.++++.+++. ++.+... .|. ...++.|.+.|++.+++.-
T Consensus 184 ~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~g~--~~~l~~l~~~g~d~~~~d~ 260 (338)
T 2eja_A 184 YLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGS--SSFIDLAVDYRADALSVDW 260 (338)
T ss_dssp HHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEESSH--HHHHHHHTTSCCSEEECCT
T ss_pred HHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcCCc--HHHHHHHHHcCCCEEEeCC
Confidence 33444567998877655421 1122 1234666677777765 6554443 344 6789999999999887643
No 161
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=74.10 E-value=22 Score=32.91 Aligned_cols=125 Identities=18% Similarity=0.157 Sum_probs=71.3
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC-CHH
Q psy8190 104 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPK 181 (348)
Q Consensus 104 ~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et-~~e 181 (348)
.+.++.+.+.|++.|.|...... .+.+.++++.+++. ++.+.+ .+..+.+.++.+.++|+|.|.+|.+. +..
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~-----~~~~~e~I~~ik~~~~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~ 219 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH-----SLNIIRTLKEIKSKMNIDVIV-GNVVTEEATKELIENGADGIKVGIGPGSIC 219 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS-----BHHHHHHHHHHHTTCCCEEEE-EEECSHHHHHHHHHTTCSEEEECC------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC-----cccHHHHHHHHHhcCCCeEEE-eecCCHHHHHHHHHcCCCEEEEeCCCCcCc
Confidence 45566677789999887543111 15677888888874 666653 13478899999999999999987653 211
Q ss_pred HHhccCC-CC-CHHHHHHHHHHHHHcCCeeeE-eEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 182 LYGDIIS-TR-DYENRLNTLKNVRNVGINICC-GGIIGLSESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 182 ~l~~i~~-~~-~~~~~~~~i~~~~~~G~~i~~-~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
..+.... +. ....+.+..+.+++.++++.+ +-| .+.+|+.+.+ .++ .+.+.+-
T Consensus 220 ~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI----~~~~di~kal----alG--Ad~V~vG 275 (400)
T 3ffs_A 220 TTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGI----RYSGDIGKAL----AVG--ASSVMIG 275 (400)
T ss_dssp ---CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCC----CSHHHHHHHH----TTT--CSEEEEC
T ss_pred ccccccccchhHHHHHHHHHHHHHhcCCCEEecCCC----CCHHHHHHHH----HcC--CCEEEEC
Confidence 1111111 11 233444444444555666432 222 3566665554 456 6666543
No 162
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=73.92 E-value=19 Score=35.59 Aligned_cols=106 Identities=8% Similarity=0.071 Sum_probs=75.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc------ccHHHHHHHHHHHHhcCcEEEE--ecCCC---CHHHHHHHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKD------RDLDNIENMICEVKKIGLETCL--TLGML---NENQAYRLKK 166 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~------~~~~~~~~l~~~i~~~~~~i~~--~~g~l---~~e~l~~Lk~ 166 (348)
.+.+...+.++.+.++|+..|++-.|+..... .+...+.++++..++.|+.+.+ +.+.+ -++.++.+++
T Consensus 306 ~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 306 VNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHH
Confidence 58899999999999999999999777642111 1124688999999988877654 32211 2458899999
Q ss_pred hCCCeeeccC-CCC-HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe
Q psy8190 167 VGLDYYNHNL-DTS-PKLYGDIISTRDYENRLNTLKNVRNVGINICCG 212 (348)
Q Consensus 167 aG~~~i~~g~-et~-~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~ 212 (348)
.|++.|-++. +.+ ++ ..+...+.++.|.+.++.|+.|
T Consensus 386 ~Gv~gvK~Df~~~~~Q~---------~v~~y~~i~~~aA~~~l~V~fH 424 (641)
T 3a24_A 386 MGVKGFKVDFMDRDDQE---------MTAFNYRAAEMCAKYKLILDLH 424 (641)
T ss_dssp HTCCEEEEECCCCCSHH---------HHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCCEEEECCCCCCcHH---------HHHHHHHHHHHHHHcCCEEEcC
Confidence 9999999864 442 22 3345667788888999877664
No 163
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=73.78 E-value=9 Score=34.04 Aligned_cols=60 Identities=12% Similarity=0.185 Sum_probs=41.9
Q ss_pred HHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++++.+.|+..|.+.. .+++.+.++++.+.. .+.+.++.| ++.+.+..+.++|+|.+.+|
T Consensus 221 ~~eA~~aGaD~I~ld~-------~~~e~l~~~v~~~~~-~~~I~ASGG-It~~~i~~~a~~GvD~isvG 280 (296)
T 1qap_A 221 LDDALKAGADIIMLDN-------FNTDQMREAVKRVNG-QARLEVSGN-VTAETLREFAETGVDFISVG 280 (296)
T ss_dssp HHHHHHTTCSEEEESS-------CCHHHHHHHHHTTCT-TCCEEECCC-SCHHHHHHHHHTTCSEEECS
T ss_pred HHHHHHcCCCEEEECC-------CCHHHHHHHHHHhCC-CCeEEEECC-CCHHHHHHHHHcCCCEEEEe
Confidence 3444566888776632 244677777665432 466666666 59999999999999999875
No 164
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=73.77 E-value=37 Score=28.12 Aligned_cols=183 Identities=9% Similarity=0.069 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCc---EEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGL---ETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~---~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.+++. .++.+.+.|++.|.+-- ...+.+.+.++++.+++... ++.++ +.++...++|++.+.++.
T Consensus 29 ~~~l~-~~~~~~~~G~~~v~lr~-----~~~~~~~~~~~~~~l~~~~~~~~~l~v~------~~~~~a~~~gad~v~l~~ 96 (221)
T 1yad_A 29 VEELA-RIIITIQNEVDFIHIRE-----RSKSAADILKLLDLIFEGGIDKRKLVMN------GRVDIALFSTIHRVQLPS 96 (221)
T ss_dssp HHHHH-HHHHHHGGGCSEEEECC-----TTSCHHHHHHHHHHHHHTTCCGGGEEEE------SCHHHHHTTTCCEEEECT
T ss_pred cchHH-HHHHHHHCCCCEEEEcc-----CCCCHHHHHHHHHHHHHhcCcCCeEEEe------ChHHHHHHcCCCEEEeCC
Confidence 34443 35566677898876632 23456778888888876422 34444 346788899999998864
Q ss_pred CCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCC
Q psy8190 177 DTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLY 255 (348)
Q Consensus 177 et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~ 255 (348)
+.. .. +.++.... |+. +|. -.|.++. ..+.+.+ ++.+.+.+..+.+. ..
T Consensus 97 ~~~-----------~~----~~~~~~~~-~~~------ig~sv~t~~~~----~~a~~~g--aD~i~~~~~f~~~~--~~ 146 (221)
T 1yad_A 97 GSF-----------SP----KQIRARFP-HLH------IGRSVHSLEEA----VQAEKED--ADYVLFGHVFETDC--KK 146 (221)
T ss_dssp TSC-----------CH----HHHHHHCT-TCE------EEEEECSHHHH----HHHHHTT--CSEEEEECCC--------
T ss_pred Ccc-----------CH----HHHHHHCC-CCE------EEEEcCCHHHH----HHHHhCC--CCEEEECCccccCC--CC
Confidence 321 11 22222222 433 333 3466553 3344566 78887766533211 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCC--CchHHHHHHHHcCC
Q psy8190 256 GSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNT--KTNDDSKLLKKLGI 332 (348)
Q Consensus 256 ~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~--~~~~~~~~i~~~G~ 332 (348)
..+ +... ..+...+... +..+-+.+|- ..+....++.+||+.+..|..+.....+ ..++..+.+++.++
T Consensus 147 g~~-~~~~---~~l~~~~~~~-~~pvia~GGI---~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~~~ 217 (221)
T 1yad_A 147 GLE-GRGV---SLLSDIKQRI-SIPVIAIGGM---TPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKEMRY 217 (221)
T ss_dssp -----CHH---HHHHHHHHHC-CSCEEEESSC---CGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHHC-
T ss_pred CCC-CCCH---HHHHHHHHhC-CCCEEEECCC---CHHHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHHhhh
Confidence 111 1222 2233333223 3234344443 2344455678999999887655432221 12334455555554
No 165
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=73.75 E-value=41 Score=28.56 Aligned_cols=176 Identities=13% Similarity=0.072 Sum_probs=105.4
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEec----CCCCH----HHHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTL----GMLNE----NQAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~----g~l~~----e~l~~Lk~aG 168 (348)
..+.++|.+.++++.+.|+..||+..+ ... ....++..++.+++-. |..+. ...+.-.+.|
T Consensus 25 ~~t~~~i~~lc~eA~~~~~~aVcV~p~-------~v~----~a~~l~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~G 93 (231)
T 3ndo_A 25 EATPSDVTALVDEAADLGVFAVCVSPP-------LVS----VAAGVAPSGLAIAAVAGFPSGKHVPGIKATEAELAVAAG 93 (231)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEECGG-------GHH----HHHHHCCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEECHH-------HHH----HHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcC
Confidence 367899999999999999999988322 122 2223444567776543 33232 2344555669
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHc--CCeeeEeEeeec-C----CCHHHHHHHHHHHHhcCCCCCee
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV--GINICCGGIIGL-S----ESRDQRAELIFQLANLNPYPESV 241 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~--G~~i~~~~i~Gl-g----et~e~~~~~l~~l~~l~~~~~~i 241 (348)
.+-|.+-+.- ..++ ..+++...+-++..+++ |.. .-+|+-- - .|.+++....+...+.+ .+.|
T Consensus 94 AdEIDmVini--g~lk----~g~~~~v~~ei~~v~~a~~~~~--lKvIiEt~~L~~~~t~eei~~a~~ia~~aG--ADfV 163 (231)
T 3ndo_A 94 ATEIDMVIDV--GAAL----AGDLDAVSADITAVRKAVRAAT--LKVIVESAALLEFSGEPLLADVCRVARDAG--ADFV 163 (231)
T ss_dssp CSEEEEECCH--HHHH----TTCHHHHHHHHHHHHHHTTTSE--EEEECCHHHHHHHTCHHHHHHHHHHHHHTT--CSEE
T ss_pred CCEEEEEeeh--Hhhh----cccHHHHHHHHHHHHHHccCCc--eEEEEECcccCCCCCHHHHHHHHHHHHHHC--cCEE
Confidence 9988754311 1111 34667777777766664 432 2444433 1 38888888888888998 8888
Q ss_pred eccc-ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCccee
Q psy8190 242 PINN-LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSI 306 (348)
Q Consensus 242 ~~~~-l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~ 306 (348)
.-+. |.|.. ..+.+...-|..... +...|.+++|-.+. +.....+.+||+.+
T Consensus 164 KTSTGf~~~~--------gAt~edv~lm~~~v~---~~v~VKaaGGIrt~--~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 164 KTSTGFHPSG--------GASVQAVEIMARTVG---ERLGVKASGGIRTA--EQAAAMLDAGATRL 216 (231)
T ss_dssp ECCCSCCTTC--------SCCHHHHHHHHHHHT---TTSEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred EcCCCCCCCC--------CCCHHHHHHHHHHhC---CCceEEEeCCCCCH--HHHHHHHHhcchhc
Confidence 7654 43212 234444433333332 45678888774443 33455679999987
No 166
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=73.64 E-value=53 Score=29.80 Aligned_cols=195 Identities=13% Similarity=0.017 Sum_probs=103.2
Q ss_pred cHHHHHHHHHHHHh-cCcEEEEecCCCCHHH----HHHHH---HhCCCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHH
Q psy8190 131 DLDNIENMICEVKK-IGLETCLTLGMLNENQ----AYRLK---KVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKN 201 (348)
Q Consensus 131 ~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~----l~~Lk---~aG~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~ 201 (348)
..+.+.+.++.+++ .+..+.++..-.+.+. ++.+. ++|+|.+.+++-+ ...-...+ ..+++...+.++.
T Consensus 110 G~~~~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l--~~~~e~~~~il~a 187 (354)
T 4ef8_A 110 GFDFYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQV--AYDFDAMRQCLTA 187 (354)
T ss_dssp CHHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCG--GGSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhh--ccCHHHHHHHHHH
Confidence 45666666665543 2556667753334432 34454 5688999998876 42211111 2366777777888
Q ss_pred HHHc-CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc-cc------cccCCCCCC-------CC-CCCCHHHH
Q psy8190 202 VRNV-GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN-NL------VQIKGTPLY-------GS-SILDPLEF 265 (348)
Q Consensus 202 ~~~~-G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~-~l------~P~~gT~l~-------~~-~~~~~~~~ 265 (348)
+++. .+++.+-+-.++ +.+++.+.++.+.+.+ ..+.+.+. .+ -+...|+.. .. .++-....
T Consensus 188 v~~~~~~PV~vKi~p~~--d~~~~~~~a~~~~~~G-g~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a 264 (354)
T 4ef8_A 188 VSEVYPHSFGVKMPPYF--DFAHFDAAAEILNEFP-KVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTA 264 (354)
T ss_dssp HHHHCCSCEEEEECCCC--SHHHHHHHHHHHHTCT-TEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHH
T ss_pred HHHhhCCCeEEEecCCC--CHHHHHHHHHHHHhCC-CccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHH
Confidence 7774 556555444443 5677777776666653 13444431 11 111222211 01 11112334
Q ss_pred HHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCc-----hHHHHHHHHcCCC
Q psy8190 266 IRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKT-----NDDSKLLKKLGIN 333 (348)
Q Consensus 266 ~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~-----~~~~~~i~~~G~~ 333 (348)
++++...+...++..|-..+|-.+ .+.....+.+||+.++.+--+ ...|+.. +++.+.+.+.|+.
T Consensus 265 ~~~i~~v~~~~~~ipII~~GGI~s--~~da~~~l~aGAd~V~vgra~-l~~GP~~~~~i~~~l~~~m~~~G~~ 334 (354)
T 4ef8_A 265 LANINAFYRRCPGKLIFGCGGVYT--GEDAFLHVLAGASMVQVGTAL-QEEGPSIFERLTSELLGVMAKKRYQ 334 (354)
T ss_dssp HHHHHHHHHHCTTSEEEEESCCCS--HHHHHHHHHHTEEEEEECHHH-HHHCTTHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCCCEEEECCcCC--HHHHHHHHHcCCCEEEEhHHH-HHhCHHHHHHHHHHHHHHHHHcCCC
Confidence 555555555565544444444322 333455678999999776422 1234432 3556777888886
No 167
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=73.59 E-value=4.1 Score=36.59 Aligned_cols=81 Identities=11% Similarity=0.052 Sum_probs=53.2
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHH-hCCCeeeccCC--CCH
Q psy8190 104 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKK-VGLDYYNHNLD--TSP 180 (348)
Q Consensus 104 ~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~-aG~~~i~~g~e--t~~ 180 (348)
.+.++.+.+.|+..|.+.|+........... .++++.+++ ++++.++.|..+.+.+..+.+ .|+|.|.+|=. .+|
T Consensus 143 ~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~-~~~i~~i~~-~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P 220 (318)
T 1vhn_A 143 EEIYRILVEEGVDEVFIHTRTVVQSFTGRAE-WKALSVLEK-RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRP 220 (318)
T ss_dssp HHHHHHHHHTTCCEEEEESSCTTTTTSSCCC-GGGGGGSCC-SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCT
T ss_pred HHHHHHHHHhCCCEEEEcCCCccccCCCCcC-HHHHHHHHc-CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCc
Confidence 3666777788999998887621110000011 145566666 788888999889888877777 79999998733 346
Q ss_pred HHHhcc
Q psy8190 181 KLYGDI 186 (348)
Q Consensus 181 e~l~~i 186 (348)
.++.++
T Consensus 221 ~l~~~~ 226 (318)
T 1vhn_A 221 WIFKQI 226 (318)
T ss_dssp THHHHH
T ss_pred chHHHH
Confidence 665544
No 168
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=73.48 E-value=10 Score=33.64 Aligned_cols=64 Identities=16% Similarity=0.157 Sum_probs=44.5
Q ss_pred HHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC
Q psy8190 106 AAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et 178 (348)
+++++.+.|++.|.+... +++.+.+.++.+.. .+.+.++ |.++.+.+..+.+.|+|.+++|-=|
T Consensus 221 e~~eAl~aGaD~I~LDn~-------~~~~l~~av~~i~~-~v~ieaS-GGI~~~~i~~~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 221 QLRTALAHGARSVLLDNF-------TLDMMRDAVRVTEG-RAVLEVS-GGVNFDTVRAIAETGVDRISIGALT 284 (298)
T ss_dssp HHHHHHHTTCEEEEEESC-------CHHHHHHHHHHHTT-SEEEEEE-SSCSTTTHHHHHHTTCSEEECGGGG
T ss_pred HHHHHHHcCCCEEEECCC-------CHHHHHHHHHHhCC-CCeEEEE-cCCCHHHHHHHHHcCCCEEEECCee
Confidence 344555678887777432 34677777777642 3555544 5589999999999999999987533
No 169
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=73.44 E-value=49 Score=29.72 Aligned_cols=30 Identities=27% Similarity=0.464 Sum_probs=14.3
Q ss_pred cHHHHHHHHHHHHhcCcE-EEE--ecCCCCHHH
Q psy8190 131 DLDNIENMICEVKKIGLE-TCL--TLGMLNENQ 160 (348)
Q Consensus 131 ~~~~~~~l~~~i~~~~~~-i~~--~~g~l~~e~ 160 (348)
+.+++.++++.+.+.|+. +++ +.|..+++.
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~ 199 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEE 199 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHH
Confidence 445555555555554432 222 345555543
No 170
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=73.10 E-value=48 Score=29.05 Aligned_cols=88 Identities=13% Similarity=0.115 Sum_probs=53.0
Q ss_pred HHhCCCCEEEEecc------C-CCCCcccHHHHHHHHHHHHh-cC-cEEEEecCC----CCHHH-----HHHHHHhCCCe
Q psy8190 110 AKSDGATRFCMGAA------W-RELKDRDLDNIENMICEVKK-IG-LETCLTLGM----LNENQ-----AYRLKKVGLDY 171 (348)
Q Consensus 110 ~~~~G~~~i~l~gg------~-~~~~~~~~~~~~~l~~~i~~-~~-~~i~~~~g~----l~~e~-----l~~Lk~aG~~~ 171 (348)
+.+.|++-++.+++ | .+....+++.+....+.+.+ .. ..+.+..+. .+.+. .+.++++|++.
T Consensus 50 ~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~eaGa~a 129 (281)
T 1oy0_A 50 FDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHA 129 (281)
T ss_dssp HHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHHHTTCCSE
T ss_pred HHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHHHHhCCeE
Confidence 45678987754321 1 11123456778888888876 32 334444332 24554 45666799999
Q ss_pred eeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe
Q psy8190 172 YNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCG 212 (348)
Q Consensus 172 i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~ 212 (348)
|.+ |.. ++..+.++.+.++|++++.|
T Consensus 130 Vkl--Edg-------------~e~~~~I~al~~agIpV~gH 155 (281)
T 1oy0_A 130 VKL--EGG-------------ERVAEQIACLTAAGIPVMAH 155 (281)
T ss_dssp EEE--EBS-------------GGGHHHHHHHHHHTCCEEEE
T ss_pred EEE--CCc-------------HHHHHHHHHHHHCCCCEEee
Confidence 875 432 25567788888999887643
No 171
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=73.04 E-value=10 Score=33.46 Aligned_cols=63 Identities=13% Similarity=0.231 Sum_probs=45.2
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
++++++.+.|+..|.+.. . +.+.+.++++.++. .+.+.++ |.++.+.+..+.+.|+|.+++|-
T Consensus 209 ~ea~eAl~aGaD~I~LDn----~---~~~~l~~av~~~~~-~v~ieaS-GGIt~~~i~~~a~tGVD~IsvGa 271 (287)
T 3tqv_A 209 DELNQAIAAKADIVMLDN----F---SGEDIDIAVSIARG-KVALEVS-GNIDRNSIVAIAKTGVDFISVGA 271 (287)
T ss_dssp HHHHHHHHTTCSEEEEES----C---CHHHHHHHHHHHTT-TCEEEEE-SSCCTTTHHHHHTTTCSEEECSH
T ss_pred HHHHHHHHcCCCEEEEcC----C---CHHHHHHHHHhhcC-CceEEEE-CCCCHHHHHHHHHcCCCEEEECh
Confidence 445555667888887732 1 34678888877764 3555544 45788999999999999999874
No 172
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=72.81 E-value=37 Score=27.68 Aligned_cols=163 Identities=12% Similarity=0.077 Sum_probs=96.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI---GLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
..+.++..+.++.+.+.|+.-+.+... .+ .. .+.++.+++. +..+.++. ..+.+.++...++|+|.+
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~--~~---~~---~~~i~~ir~~~~~~~~ig~~~-v~~~~~~~~a~~~Gad~i- 87 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFT--VP---DA---DTVIKELSFLKEKGAIIGAGT-VTSVEQCRKAVESGAEFI- 87 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETT--ST---TH---HHHHHHTHHHHHTTCEEEEES-CCSHHHHHHHHHHTCSEE-
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCC--Ch---hH---HHHHHHHHHHCCCCcEEEecc-cCCHHHHHHHHHcCCCEE-
Confidence 467889999999998999998877544 22 11 2344555442 45554432 367888999999999988
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCC
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTP 253 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~ 253 (348)
++.... .+.++.+++.|+.+..+ . .|.++. ..+.+++ .+.+.+++..+
T Consensus 88 v~~~~~----------------~~~~~~~~~~g~~vi~g----~-~t~~e~----~~a~~~G--ad~vk~~~~~~----- 135 (205)
T 1wa3_A 88 VSPHLD----------------EEISQFCKEKGVFYMPG----V-MTPTEL----VKAMKLG--HTILKLFPGEV----- 135 (205)
T ss_dssp ECSSCC----------------HHHHHHHHHHTCEEECE----E-CSHHHH----HHHHHTT--CCEEEETTHHH-----
T ss_pred EcCCCC----------------HHHHHHHHHcCCcEECC----c-CCHHHH----HHHHHcC--CCEEEEcCccc-----
Confidence 543211 24567778889886543 2 255543 3456777 77776532110
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeecc
Q psy8190 254 LYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLT 314 (348)
Q Consensus 254 l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~ 314 (348)
.-...+...+..+|+..+-..+|- + .+.....+.+||+.+..|..+..
T Consensus 136 ----------~g~~~~~~l~~~~~~~pvia~GGI-~--~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 136 ----------VGPQFVKAMKGPFPNVKFVPTGGV-N--LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp ----------HHHHHHHHHHTTCTTCEEEEBSSC-C--TTTHHHHHHHTCSCEEECHHHHC
T ss_pred ----------cCHHHHHHHHHhCCCCcEEEcCCC-C--HHHHHHHHHCCCCEEEECccccC
Confidence 112333333444554334444442 2 23345568899999988865543
No 173
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=72.48 E-value=28 Score=31.61 Aligned_cols=122 Identities=7% Similarity=-0.000 Sum_probs=68.3
Q ss_pred HHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC-----------------CCHHHHHHH-HHh
Q psy8190 106 AAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM-----------------LNENQAYRL-KKV 167 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~-----------------l~~e~l~~L-k~a 167 (348)
.++...+.|+++|-|-|+ .-|...+.....++++..+..++.+....|. .++|.+..+ ++.
T Consensus 116 ~i~~~i~~GFtSVMiDgS-~lp~eENi~~Tk~vv~~ah~~gvsVEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~t 194 (349)
T 3elf_A 116 RVSKGGNPLFQSHMWDGS-AVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTIEAL 194 (349)
T ss_dssp HHHTTCCCSCSEEEECCT-TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCBC-------------CCCHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEecCC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeccccccCCcccccccccCCCHHHHHHHHHHh
Confidence 333334457999988776 3333445566667777777777777664432 245565554 456
Q ss_pred C-----CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHH-HcCCe----eeEeEeeec-CCCHHHHHHHH
Q psy8190 168 G-----LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVR-NVGIN----ICCGGIIGL-SESRDQRAELI 228 (348)
Q Consensus 168 G-----~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~-~~G~~----i~~~~i~Gl-get~e~~~~~l 228 (348)
| +|.+-+++.|.--.|+.=.+.-+++...+.-+.+. +.|++ -..-++-|- |-..+++.+.+
T Consensus 195 g~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai 266 (349)
T 3elf_A 195 GAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEAL 266 (349)
T ss_dssp TTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCHHHHHHHH
T ss_pred CCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCCCHHHHHHHH
Confidence 7 89999988885445542123345554433333332 33432 112234466 77777766554
No 174
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=72.22 E-value=30 Score=30.66 Aligned_cols=112 Identities=10% Similarity=0.024 Sum_probs=73.8
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-EN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|..+ .+ ..+...++|
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~-~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 110 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESP-TTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEG 110 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchh-hCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 367889999999999999999888765 3433 45667777777766552 577777777443 43 445566679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. + -+.+..++-++.+.+ .++++..+-+-+.
T Consensus 111 adavlv~~P----~y~---~-~s~~~l~~~f~~va~a~~lPiilYn~P~~ 152 (304)
T 3l21_A 111 AHGLLVVTP----YYS---K-PPQRGLQAHFTAVADATELPMLLYDIPGR 152 (304)
T ss_dssp CSEEEEECC----CSS---C-CCHHHHHHHHHHHHTSCSSCEEEEECHHH
T ss_pred CCEEEECCC----CCC---C-CCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 999875331 111 1 266777777777665 4777765555443
No 175
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=72.16 E-value=4.7 Score=34.80 Aligned_cols=117 Identities=14% Similarity=0.165 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccC----CCCC--cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAW----RELK--DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~----~~~~--~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
.+++++.+... .-..++|+-.. ++.. ....+.+.++++.+++.|+.+++-.. -+.+.++.-++.|.++|.
T Consensus 75 t~emi~ial~~---kP~~vtLVPEkreE~TTegGldv~~~~L~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~GAd~IE 150 (260)
T 3o6c_A 75 NDEILNLALKL---KPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFIN-PSLEDIEKSKILKAQFIE 150 (260)
T ss_dssp CHHHHHHHHHH---CCSEEEECCCSGGGBCTTSSBCTTCTTHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHc---CCCEEEECCCCCCccCCCCChhhCHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCCCEEE
Confidence 46777665544 35677776320 0000 11457889999999999998876653 677899999999999998
Q ss_pred ccCCCCHHHH----hccCCC-------------------CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHH
Q psy8190 174 HNLDTSPKLY----GDIIST-------------------RDYENRLNTLKNVRNVGINICCGGIIGL-SESRD 222 (348)
Q Consensus 174 ~g~et~~e~l----~~i~~~-------------------~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e 222 (348)
+--+.-.+.+ ..+.+. ..++...++.+.+++.|+.|+++ -|| .++..
T Consensus 151 LhTG~YA~a~~~~~sn~~~~~~~~~~l~~~~~~~~~~~~~el~~l~~aA~~A~~lGL~VnAG--HGL~y~Nv~ 221 (260)
T 3o6c_A 151 LHTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAG--HGLNYKNVK 221 (260)
T ss_dssp ECCHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEC--TTCCTTTTH
T ss_pred EechHhhhhhhccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEecC--CCCCHHHHH
Confidence 7544311211 122111 12334555566677888888766 444 44443
No 176
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=72.10 E-value=42 Score=28.02 Aligned_cols=170 Identities=10% Similarity=0.013 Sum_probs=91.0
Q ss_pred cCHH--HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEE-EEec------CC---CCHHHHHHH
Q psy8190 98 LSIE--SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLET-CLTL------GM---LNENQAYRL 164 (348)
Q Consensus 98 ~~~e--ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i-~~~~------g~---l~~e~l~~L 164 (348)
.+++ ++.+.++.+.+.|+..+++.+ . +.++.+++ .++++ .+.. +. .+.+.++.+
T Consensus 31 ~~~~~~~~~~~a~~~~~~G~~~i~~~~---------~----~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~ 97 (234)
T 1yxy_A 31 YSETGGIMPLMAKAAQEAGAVGIRANS---------V----RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQL 97 (234)
T ss_dssp CCTTCCSHHHHHHHHHHHTCSEEEEES---------H----HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHH
T ss_pred cCCccchHHHHHHHHHHCCCcEeecCC---------H----HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHH
Confidence 3456 667777777788999887631 1 23555554 35554 2211 11 256889999
Q ss_pred HHhCCCeeeccCCCCHHHHhccCC-CCCHHHHHHHHHHHHHc--CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCee
Q psy8190 165 KKVGLDYYNHNLDTSPKLYGDIIS-TRDYENRLNTLKNVRNV--GINICCGGIIGLSESRDQRAELIFQLANLNPYPESV 241 (348)
Q Consensus 165 k~aG~~~i~~g~et~~e~l~~i~~-~~~~~~~~~~i~~~~~~--G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i 241 (348)
.++|++.+.++.+... ++ +... .+.++.+++. |..+.. + -.|.++ +..+.+.+ .+.+
T Consensus 98 ~~~Gad~V~l~~~~~~------~~~~~~~---~~~i~~i~~~~~~~~v~~----~-~~t~~e----a~~a~~~G--ad~i 157 (234)
T 1yxy_A 98 AALNIAVIAMDCTKRD------RHDGLDI---ASFIRQVKEKYPNQLLMA----D-ISTFDE----GLVAHQAG--IDFV 157 (234)
T ss_dssp HTTTCSEEEEECCSSC------CTTCCCH---HHHHHHHHHHCTTCEEEE----E-CSSHHH----HHHHHHTT--CSEE
T ss_pred HHcCCCEEEEcccccC------CCCCccH---HHHHHHHHHhCCCCeEEE----e-CCCHHH----HHHHHHcC--CCEE
Confidence 9999999988765410 01 1122 3556666665 443222 2 345555 44455676 7888
Q ss_pred --ecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 242 --PINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 242 --~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.++.+.| ++. ....++.+...+ .+.. +..+-+++|-.+ .+.....+.+||+.++.|..+
T Consensus 158 ~~~v~g~~~--~~~--~~~~~~~~~i~~----~~~~--~ipvia~GGI~s--~~~~~~~~~~Gad~v~vGsal 218 (234)
T 1yxy_A 158 GTTLSGYTP--YSR--QEAGPDVALIEA----LCKA--GIAVIAEGKIHS--PEEAKKINDLGVAGIVVGGAI 218 (234)
T ss_dssp ECTTTTSST--TSC--CSSSCCHHHHHH----HHHT--TCCEEEESCCCS--HHHHHHHHTTCCSEEEECHHH
T ss_pred eeeccccCC--CCc--CCCCCCHHHHHH----HHhC--CCCEEEECCCCC--HHHHHHHHHCCCCEEEEchHH
Confidence 5555543 332 112233222222 2221 333444444221 333445678899999888644
No 177
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=72.01 E-value=5.5 Score=37.28 Aligned_cols=81 Identities=7% Similarity=-0.034 Sum_probs=51.9
Q ss_pred HHHHHHhCCCeeeccC--CCC-H----HHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCC----------H
Q psy8190 161 AYRLKKVGLDYYNHNL--DTS-P----KLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SES----------R 221 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~--et~-~----e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get----------~ 221 (348)
+..|++.|++.|.+.. ++. . .-|..+.+. .+.++..+.++.||+.|++|..++++.+ ++. .
T Consensus 42 Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s~~~wF~~q~~~Vr 121 (424)
T 2dh2_A 42 LDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRGENSWFSTQVDTVA 121 (424)
T ss_dssp HHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTTTTSSSTTCSSCHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCCcCCCcccccccCHHHH
Confidence 4555555555555531 111 0 112234443 3789999999999999999999999998 632 2
Q ss_pred HHHHHHHHHHHhcCCCCCeeec
Q psy8190 222 DQRAELIFQLANLNPYPESVPI 243 (348)
Q Consensus 222 e~~~~~l~~l~~l~~~~~~i~~ 243 (348)
+.+.+.+++-.+.+ ++.+.+
T Consensus 122 ~~~~~~~~~Wl~~g--vDGfRl 141 (424)
T 2dh2_A 122 TKVKDALEFWLQAG--VDGFQV 141 (424)
T ss_dssp HHHHHHHHHHHHHT--CCEEEE
T ss_pred HHHHHHHHHHHHcC--CCEEEE
Confidence 45666666555566 776655
No 178
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=72.01 E-value=42 Score=27.97 Aligned_cols=161 Identities=12% Similarity=0.071 Sum_probs=94.8
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
..++++.++.++.+.+.|++-|-+.-- ++. . .+.++.+++. ++.+.... .++.+.++...++|.+.+..
T Consensus 24 ~~~~~~~~~~~~al~~gGv~~iel~~k--~~~--~----~~~i~~l~~~~~~~~vgagt-vi~~d~~~~A~~aGAd~v~~ 94 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVLNVTLR--TEC--A----VDAIRAIAKEVPEAIVGAGT-VLNPQQLAEVTEAGAQFAIS 94 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEESC--STT--H----HHHHHHHHHHCTTSEEEEES-CCSHHHHHHHHHHTCSCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCC--Chh--H----HHHHHHHHHHCcCCEEeeCE-EEEHHHHHHHHHcCCCEEEc
Confidence 357788888899999999998877532 221 2 2344544432 34444444 78899999999999998875
Q ss_pred cCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCC
Q psy8190 175 NLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPL 254 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l 254 (348)
+ +++. +.++.+++.|... +.|. .|+++... +.+.+ .+.+.+++ ..+
T Consensus 95 p-~~d~----------------~v~~~~~~~g~~~----i~G~-~t~~e~~~----A~~~G--ad~v~~Fp-----a~~- 140 (214)
T 1wbh_A 95 P-GLTE----------------PLLKAATEGTIPL----IPGI-STVSELML----GMDYG--LKEFKFFP-----AEA- 140 (214)
T ss_dssp S-SCCH----------------HHHHHHHHSSSCE----EEEE-SSHHHHHH----HHHTT--CCEEEETT-----TTT-
T ss_pred C-CCCH----------------HHHHHHHHhCCCE----EEec-CCHHHHHH----HHHCC--CCEEEEec-----Ccc-
Confidence 5 3332 4566777788643 4453 46666543 34677 88888733 111
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHh-CcceeeeCCee
Q psy8190 255 YGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLA-GANSIFYGDKL 312 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~-GAn~~~~~~~~ 312 (348)
... ...+...+-.+|+..+-..+|- + .+.....+.+ |+..+. +..+
T Consensus 141 -----~gG---~~~lk~i~~~~~~ipvvaiGGI-~--~~n~~~~l~agg~~~v~-gS~i 187 (214)
T 1wbh_A 141 -----NGG---VKALQAIAGPFSQVRFCPTGGI-S--PANYRDYLALKSVLCIG-GSWL 187 (214)
T ss_dssp -----TTH---HHHHHHHHTTCTTCEEEEBSSC-C--TTTHHHHHTSTTBSCEE-EGGG
T ss_pred -----ccC---HHHHHHHhhhCCCCeEEEECCC-C--HHHHHHHHhcCCCeEEE-eccc
Confidence 111 2344455556665433333432 1 2223345676 777775 4433
No 179
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=71.94 E-value=37 Score=29.13 Aligned_cols=220 Identities=9% Similarity=0.013 Sum_probs=105.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.+++++++. +.+.|+...++.+... ....-+++.++++.-.. ...-+.+++.. ..+.++++.+.|+..|.++.
T Consensus 40 ~~~~~~l~~---m~~~GV~~~v~~~~~~--~~~~n~~~~~~~~~~p~r~~~~~~v~p~~-~~~el~~~~~~g~~Gi~~~~ 113 (288)
T 2ffi_A 40 APLGDYLGQ---LRAHGFSHGVLVQPSF--LGTDNRYLLSALQTVPGQLRGVVMLERDV-EQATLAEMARLGVRGVRLNL 113 (288)
T ss_dssp BCHHHHHHH---HHHTSCCEECCBCCGG--GTTCCHHHHHHHHHSTTTBCCBBCCCSSC-CHHHHHHHHTTTCCEEECCC
T ss_pred CCHHHHHHH---HHHhCCCeEEEECCcc--ccccHHHHHHHHHHCCCCEEEEEEeCCCC-CHHHHHHHHHCCCeEEEEec
Confidence 466777654 4467998866654311 11233566666654322 11112234432 35788888888999888766
Q ss_pred CCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCC
Q psy8190 177 DTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG 256 (348)
Q Consensus 177 et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~ 256 (348)
.... .+...-+.+...++.+.+.|+.+..+. | .....++ ...+++.. ...+-.+...|.+.. .
T Consensus 114 ~~~~------~~~~~~~~~~~~~~~a~~~~lpv~iH~--~-~~~~~~~---~~~~~~~p--l~~vi~H~g~~~~~~---~ 176 (288)
T 2ffi_A 114 MGQD------MPDLTGAQWRPLLERIGEQGWHVELHR--Q-VADIPVL---VRALQPYG--LDIVIDHFGRPDARR---G 176 (288)
T ss_dssp SSSC------CCCTTSTTTHHHHHHHHHHTCEEEECS--C-TTTHHHH---HHHHTTTT--CCEEESGGGSCCTTS---C
T ss_pred ccCC------CCCcccHHHHHHHHHHHHCCCeEEEee--c-hhhHHHH---HHHHHHCC--CCEEEECCCCCCCCC---C
Confidence 4311 011122456677888889999876652 1 1223333 33344442 222222333222211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCceeccccc-cccc--------hhhHHHHHH-hCcceeeeCCee-ccCC-C-CCchHH
Q psy8190 257 SSILDPLEFIRTIAVARITMPTSRIRMSAGR-KEMG--------ETTQAFCFL-AGANSIFYGDKL-LTTD-N-TKTNDD 323 (348)
Q Consensus 257 ~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~-~~l~--------~~~~~~~l~-~GAn~~~~~~~~-~~~~-g-~~~~~~ 323 (348)
...+..+...+ + .-.|+..+.+|+-. .... ...-...+. .|++.++.|..+ .... + ......
T Consensus 177 ~~~~~~~~~~~---l--~~~~n~y~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~ 251 (288)
T 2ffi_A 177 LGQPGFAELLT---L--SGRGKVWVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDWPHTQHESEVSFGSA 251 (288)
T ss_dssp TTCTTHHHHTT---C--CCCSCEEEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHH
T ss_pred CCChhHHHHHH---H--HhCCCEEEEeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCCCCCCCCCHHHH
Confidence 11112221111 0 11355555554211 1100 011222334 499999776432 1111 1 234567
Q ss_pred HHHHHHcCCCchhhhhHHhhhh
Q psy8190 324 SKLLKKLGINTRNIKIKMKNNI 345 (348)
Q Consensus 324 ~~~i~~~G~~p~~~~~~~~~~~ 345 (348)
.+.+.+.+..+.++..-+..|.
T Consensus 252 ~~~~~~~~~~~~~~~~i~~~NA 273 (288)
T 2ffi_A 252 VEQFEALGCSAQLRQALLLDTA 273 (288)
T ss_dssp HHHHHHHCCCHHHHHHHHTHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHCH
Confidence 8888888886665555555554
No 180
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=71.90 E-value=25 Score=29.80 Aligned_cols=13 Identities=23% Similarity=0.107 Sum_probs=11.4
Q ss_pred hHHHHHHHHcCCC
Q psy8190 321 NDDSKLLKKLGIN 333 (348)
Q Consensus 321 ~~~~~~i~~~G~~ 333 (348)
....+.+++.||.
T Consensus 217 ~~~~~~l~~~gy~ 229 (262)
T 3p6l_A 217 KGMLKELKSQNFK 229 (262)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCC
Confidence 5789999999997
No 181
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=71.78 E-value=31 Score=33.06 Aligned_cols=128 Identities=10% Similarity=0.121 Sum_probs=79.8
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC-
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT- 178 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et- 178 (348)
+..+.++.+.+.|+..+.+.+. .+ ....+.++++.+++. ++.+.+ .+..+.+.++.+.++|++.+.+|...
T Consensus 256 d~~era~aLveaGvd~I~Id~a--~g---~~~~v~~~i~~i~~~~~~~~vi~-g~v~t~e~a~~~~~aGad~i~vg~g~g 329 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTA--HG---HSQGVIDKVKEVRAKYPSLNIIA-GNVATAEATKALIEAGANVVKVGIGPG 329 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECS--CT---TSHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHHTCSEEEECSSCS
T ss_pred chHHHHHHHHhhccceEEeccc--cc---chhhhhhHHHHHHHhCCCceEEe-eeeccHHHHHHHHHhCCCEEEECCCCc
Confidence 4455667778889999988765 22 225677888888874 344432 23458899999999999999886654
Q ss_pred C---HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccc
Q psy8190 179 S---PKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINN 245 (348)
Q Consensus 179 ~---~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~ 245 (348)
+ ......... -+.....+..+.+++.++++.++ |=--+.+|+.+.+ .++ .+.+.+-.
T Consensus 330 si~~~~~~~g~g~-p~~~~l~~v~~~~~~~~iPVIa~---GGI~~~~di~kal----a~G--A~~V~vGs 389 (511)
T 3usb_A 330 SICTTRVVAGVGV-PQLTAVYDCATEARKHGIPVIAD---GGIKYSGDMVKAL----AAG--AHVVMLGS 389 (511)
T ss_dssp TTCCHHHHHCCCC-CHHHHHHHHHHHHHTTTCCEEEE---SCCCSHHHHHHHH----HTT--CSEEEEST
T ss_pred cccccccccCCCC-CcHHHHHHHHHHHHhCCCcEEEe---CCCCCHHHHHHHH----HhC--chhheecH
Confidence 2 232232221 24455556666677777765432 1123667776654 356 66665543
No 182
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=71.72 E-value=24 Score=32.14 Aligned_cols=95 Identities=14% Similarity=0.118 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhcCcEEEEecC--CCCHHHHHHHHHhCCC--eeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCC
Q psy8190 132 LDNIENMICEVKKIGLETCLTLG--MLNENQAYRLKKVGLD--YYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGI 207 (348)
Q Consensus 132 ~~~~~~l~~~i~~~~~~i~~~~g--~l~~e~l~~Lk~aG~~--~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~ 207 (348)
...+...++.-++.++++.++.. ....+.++.|++.|++ ++-++- ++...+.+ ..+.+-+.|.
T Consensus 192 ~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H---------~~~~~d~~----~~~~~l~~G~ 258 (360)
T 3tn4_A 192 KMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGH---------MCDNTDPD----YHRKTLAYGV 258 (360)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECC---------GGGCCCHH----HHHHHHTTTC
T ss_pred HHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEc---------CCCCCCHH----HHHHHHHcCC
Confidence 34455666666678999888765 3345899999999986 333211 12222332 2445556798
Q ss_pred eeeEeEeeec-C----CCHHHHHHHHHHHHhcCCCCCee
Q psy8190 208 NICCGGIIGL-S----ESRDQRAELIFQLANLNPYPESV 241 (348)
Q Consensus 208 ~i~~~~i~Gl-g----et~e~~~~~l~~l~~l~~~~~~i 241 (348)
.++.+ .+|. + .+.+...+.+..+.+.+. .+.+
T Consensus 259 yl~fD-~iG~~~~~~~p~d~~r~~~l~~lv~~g~-~drI 295 (360)
T 3tn4_A 259 YIAFD-RFGIQGMVGAPTDEERVRTLLALLRDGY-EKQI 295 (360)
T ss_dssp EEEEC-CTTCCCSTTCCCHHHHHHHHHHHHHTTC-GGGE
T ss_pred EEEEc-ccccccccCCCChHHHHHHHHHHHHhcC-cceE
Confidence 88877 3344 2 356777788877766652 3444
No 183
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=71.34 E-value=5.2 Score=38.49 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=44.8
Q ss_pred HHHHHHHhCCCeeeccC--CC-C-HH-----HHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHH
Q psy8190 160 QAYRLKKVGLDYYNHNL--DT-S-PK-----LYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQR 224 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~--et-~-~e-----~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~ 224 (348)
.|..|++.|++.|.+.. ++ . .- -|..+.+. .+.++..+.++.||+.||.|..++++.+ +....-+
T Consensus 37 kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NHts~~~~wf 112 (549)
T 4aie_A 37 RLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVVNHTSDQHKWF 112 (549)
T ss_dssp THHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHH
T ss_pred hhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECccCCcCCcchh
Confidence 35666777777776642 22 1 11 12245553 3889999999999999999999999999 7654433
No 184
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=71.23 E-value=4.5 Score=38.34 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHH
Q psy8190 190 RDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAE 226 (348)
Q Consensus 190 ~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~ 226 (348)
.+.++..+.++.+|+.|+.|..++++.+ +....-+.+
T Consensus 94 Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~~ 131 (475)
T 2z1k_A 94 GGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQH 131 (475)
T ss_dssp TCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecccccCCCHHHHH
Confidence 3789999999999999999999999999 654443333
No 185
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=71.21 E-value=49 Score=30.01 Aligned_cols=184 Identities=14% Similarity=0.106 Sum_probs=97.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccC--CCCC---cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAW--RELK---DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~--~~~~---~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
+.+.+++.++.+++.|.+-+.++.-- ++++ ....+.+..+.+..++.|+.+.++ .++.+.++.+.+. ++.+.
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~te--~~d~~~~~~l~~~-vd~lk 194 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTE--ALGEDDLPKVAEY-ADIIQ 194 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEE--CSSGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHHHh-CCEEE
Confidence 67888888888888888876555421 1110 012355555555555678888654 4666777778787 88888
Q ss_pred ccCCC--CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCC
Q psy8190 174 HNLDT--SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKG 251 (348)
Q Consensus 174 ~g~et--~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~g 251 (348)
++--+ +..+ ++.+.+.|.++. +=-|+.-|.+++...++.+.+-+ ...+.+ -..|
T Consensus 195 IgAr~~~n~~L----------------L~~va~~~kPVi--lk~G~~~tl~ei~~Ave~i~~~G--N~~viL----ceRG 250 (350)
T 1vr6_A 195 IGARNAQNFRL----------------LSKAGSYNKPVL--LKRGFMNTIEEFLLSAEYIANSG--NTKIIL----CERG 250 (350)
T ss_dssp ECGGGTTCHHH----------------HHHHHTTCSCEE--EECCTTCCHHHHHHHHHHHHHTT--CCCEEE----EECC
T ss_pred ECcccccCHHH----------------HHHHHccCCcEE--EcCCCCCCHHHHHHHHHHHHHCC--CCeEEE----EeCC
Confidence 76432 1222 333334455442 22344458889999999888877 333333 1123
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHHHH--CCCCceecc--ccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 252 TPLY-GSSILDPLEFIRTIAVARIT--MPTSRIRMS--AGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 252 T~l~-~~~~~~~~~~~~~~a~~R~~--lp~~~i~~s--~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
+.-+ .....+ -.+..+...+.. +| ..+-.+ .|...+.......++.+||+++|.+..+
T Consensus 251 ~~typ~~~~~~--vdl~ai~~lk~~~~lp-Vi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~ 313 (350)
T 1vr6_A 251 IRTFEKATRNT--LDISAVPIIRKESHLP-ILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHP 313 (350)
T ss_dssp BCCSCCSSSSB--CCTTHHHHHHHHBSSC-EEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCS
T ss_pred CCCCCCcChhh--hhHHHHHHHHHhhCCC-EEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecC
Confidence 3111 110000 112222333333 33 111111 1221222456777888999999876543
No 186
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=71.20 E-value=4.2 Score=40.36 Aligned_cols=70 Identities=10% Similarity=0.126 Sum_probs=50.0
Q ss_pred HHHHHHHHhCCCeeeccC--CC-CHHHH-----hccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-SPKLY-----GDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELI 228 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~~e~l-----~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l 228 (348)
+.|..|++.|++.|.+.. ++ +.--| ..+.+. .+.++..+.++.||+.||.|..++++.+ +....-+.+.+
T Consensus 243 ~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHts~~h~wf~~~~ 322 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFHHTSFFHPYFQDVV 322 (645)
T ss_dssp HTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHH
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEecccccccCCchhhhHh
Confidence 568888899999888753 22 11111 234443 3889999999999999999999999999 66554444443
No 187
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=71.06 E-value=5.1 Score=37.16 Aligned_cols=59 Identities=14% Similarity=0.088 Sum_probs=39.9
Q ss_pred HHHHHHhCCCeeeccC--CC-C-----HHHHhccC-CC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 161 AYRLKKVGLDYYNHNL--DT-S-----PKLYGDII-ST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~--et-~-----~e~l~~i~-~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
+..|++.|++.|.+.. ++ + +.-|..+. +. .+.++..+.++.+|+.|+.|..++++.+ +.
T Consensus 27 ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 96 (405)
T 1ht6_A 27 VDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVINHRCA 96 (405)
T ss_dssp HHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCC
T ss_pred HHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcccC
Confidence 4555555555555431 11 1 11233455 43 3889999999999999999999999998 54
No 188
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=70.89 E-value=47 Score=28.02 Aligned_cols=171 Identities=13% Similarity=0.077 Sum_probs=93.5
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEE-Ee----cC---CC--CHHHHHHHH
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETC-LT----LG---ML--NENQAYRLK 165 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~-~~----~g---~l--~~e~l~~Lk 165 (348)
..+++.+.+.++.+.+.|..-|..++ .+.++.+++ .++++- .. .+ .+ +.+.++.+.
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~~~-------------~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~ 98 (229)
T 3q58_A 32 MDKPEIVAAMAQAAASAGAVAVRIEG-------------IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALA 98 (229)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEEES-------------HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHCCCcEEEECC-------------HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHH
Confidence 45778888888888888988876521 133566665 355542 22 11 22 456889999
Q ss_pred HhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccc
Q psy8190 166 KVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINN 245 (348)
Q Consensus 166 ~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~ 245 (348)
++|+|.|.++.-. .. ++ +...+.++.+++.|+.+..+. .|.++ +..+.+.+ .+.+.+..
T Consensus 99 ~aGad~I~l~~~~------~~-~p---~~l~~~i~~~~~~g~~v~~~v-----~t~ee----a~~a~~~G--ad~Ig~~~ 157 (229)
T 3q58_A 99 QAGADIIAFDASF------RS-RP---VDIDSLLTRIRLHGLLAMADC-----STVNE----GISCHQKG--IEFIGTTL 157 (229)
T ss_dssp HHTCSEEEEECCS------SC-CS---SCHHHHHHHHHHTTCEEEEEC-----SSHHH----HHHHHHTT--CSEEECTT
T ss_pred HcCCCEEEECccc------cC-Ch---HHHHHHHHHHHHCCCEEEEec-----CCHHH----HHHHHhCC--CCEEEecC
Confidence 9999998764421 01 11 234455666677777654432 35444 34556777 88886533
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 246 LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 246 l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
.-..+++. ...++. +.++.+ +.. +..+-..+|-.+ ++....++.+||+.++.|..+
T Consensus 158 ~g~t~~~~---~~~~~~-~li~~l---~~~--~ipvIA~GGI~t--~~d~~~~~~~GadgV~VGsai 213 (229)
T 3q58_A 158 SGYTGPIT---PVEPDL-AMVTQL---SHA--GCRVIAEGRYNT--PALAANAIEHGAWAVTVGSAI 213 (229)
T ss_dssp TTSSSSCC---CSSCCH-HHHHHH---HTT--TCCEEEESSCCS--HHHHHHHHHTTCSEEEECHHH
T ss_pred ccCCCCCc---CCCCCH-HHHHHH---HHc--CCCEEEECCCCC--HHHHHHHHHcCCCEEEEchHh
Confidence 21112221 122333 222222 111 222223333222 344455788999999988644
No 189
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=70.87 E-value=55 Score=28.77 Aligned_cols=123 Identities=15% Similarity=0.217 Sum_probs=71.8
Q ss_pred HHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC-----------------CCHHHHHHHH-HhC
Q psy8190 107 AQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM-----------------LNENQAYRLK-KVG 168 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~-----------------l~~e~l~~Lk-~aG 168 (348)
+..+.+.|+++|-|-|+ ..|...+.....++++..+..++.+....|. .++++...+. +.|
T Consensus 90 i~~ai~~GFtSVMiDgS-~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~Tg 168 (286)
T 1gvf_A 90 IRRKVHAGVRSAMIDGS-HFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTG 168 (286)
T ss_dssp HHHHHHTTCCEEEECCT-TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCeEEECCC-CCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHC
Confidence 33455679999988776 3333345566667777777777777653321 3345555554 679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPI 243 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~ 243 (348)
+|.+-+++.|.--.|+. .+..+++ +++.++.. .++++ ++-|- |-..+++.+. .+++ +.-+.+
T Consensus 169 vD~LAvaiGt~HG~Y~~-~p~Ld~~-~L~~I~~~--~~vpL---VlHGgSG~~~e~i~~a----i~~G--v~KiNi 231 (286)
T 1gvf_A 169 VDSLAVAIGTAHGLYSK-TPKIDFQ-RLAEIREV--VDVPL---VLHGASDVPDEFVRRT----IELG--VTKVNV 231 (286)
T ss_dssp CSEEEECSSCCSSCCSS-CCCCCHH-HHHHHHHH--CCSCE---EECCCTTCCHHHHHHH----HHTT--EEEEEE
T ss_pred CCEEEeecCccccCcCC-CCccCHH-HHHHHHHh--cCCCE---EEECCCCCCHHHHHHH----HHCC--CeEEEE
Confidence 99999999986555652 2344554 33333332 34443 34455 6666665554 4555 444444
No 190
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=70.86 E-value=5.3 Score=36.14 Aligned_cols=53 Identities=9% Similarity=0.126 Sum_probs=41.1
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEee
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGII 215 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~ 215 (348)
.+.++.|+++|++.|-+.+-..|. ....+.+..+++++.++++|+++..++-+
T Consensus 30 ~d~~~ilk~~G~N~VRi~~w~~P~-----~g~~~~~~~~~~~~~A~~~GlkV~ld~Hy 82 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRVWVNPA-----DGNYNLDYNIAIAKRAKAAGLGVYIDFHY 82 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEECSSCT-----TCTTSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccHHHHHHHCCCCEEEEeeeeCCC-----CCcCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 367899999999999986532222 12347899999999999999999888655
No 191
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=70.82 E-value=55 Score=29.75 Aligned_cols=119 Identities=12% Similarity=0.059 Sum_probs=67.1
Q ss_pred HHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC-------------------CCHHHHHHHHH-hC
Q psy8190 109 KAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM-------------------LNENQAYRLKK-VG 168 (348)
Q Consensus 109 ~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~-------------------l~~e~l~~Lk~-aG 168 (348)
...+.|+++|-|-|+ ..|...+.....++++..+..++.+....|. .+++....+.+ .|
T Consensus 130 ~~~~~GFtSVMiDgS-~lp~eENI~~Tk~vv~~ah~~gvsVEaELG~igG~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg 208 (357)
T 3qm3_A 130 THGQALFSSHMLDLS-EESLEENLSTCEVYLQKLDALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLG 208 (357)
T ss_dssp HHSSCSCSEEECCCT-TSCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCC-----CCSSTTCTTTSCCHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEEeCC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccccCCHHHHHHHHHHhC
Confidence 334568999988766 3333345556666777777777777764332 24566666555 34
Q ss_pred ----CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCee---eEeEeeec-CCCHHHHHHHH
Q psy8190 169 ----LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINI---CCGGIIGL-SESRDQRAELI 228 (348)
Q Consensus 169 ----~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i---~~~~i~Gl-get~e~~~~~l 228 (348)
+|.+-+++.|+--.|+.=.+..+++...+..+.+++ .|+.- ..-++-|- |-..+++.+.+
T Consensus 209 ~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai 277 (357)
T 3qm3_A 209 KISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKNAV 277 (357)
T ss_dssp TTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSCEEECSCTTCCHHHHHHHH
T ss_pred CCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCcEEEeCCCCCCHHHHHHHH
Confidence 457888888854555421233455555444444443 44321 11234465 76777765554
No 192
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=70.60 E-value=19 Score=32.62 Aligned_cols=87 Identities=13% Similarity=0.063 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCC----CCCc--ccHHHHHHHHHHHHh-c-CcEEEEecCCCCHHHHHHHHHhCCC
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWR----ELKD--RDLDNIENMICEVKK-I-GLETCLTLGMLNENQAYRLKKVGLD 170 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~----~~~~--~~~~~~~~l~~~i~~-~-~~~i~~~~g~l~~e~l~~Lk~aG~~ 170 (348)
+.++..+.++.+.+.|+..|.+.++.. ++.. .....-.++++.+++ . ++++.++.|..+.+.+..+.+ |+|
T Consensus 142 ~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD 220 (350)
T 3b0p_A 142 TYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVD 220 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCC
Confidence 345777888888899999998887521 1100 000012355666665 3 689999999999999888887 999
Q ss_pred eeeccCC--CCHHHHhcc
Q psy8190 171 YYNHNLD--TSPKLYGDI 186 (348)
Q Consensus 171 ~i~~g~e--t~~e~l~~i 186 (348)
.|.+|=. .+|.++.++
T Consensus 221 ~V~iGRa~l~~P~l~~~i 238 (350)
T 3b0p_A 221 GVMLGRAVYEDPFVLEEA 238 (350)
T ss_dssp EEEECHHHHHCGGGGTTH
T ss_pred EEEECHHHHhCcHHHHHH
Confidence 9998632 245555544
No 193
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=70.58 E-value=28 Score=31.53 Aligned_cols=79 Identities=11% Similarity=0.115 Sum_probs=52.1
Q ss_pred ccCHHHHHHHHHHHHhC--CCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCC-CHHHHH-HHHHhCCCee
Q psy8190 97 ILSIESVITAAQKAKSD--GATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGML-NENQAY-RLKKVGLDYY 172 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~--G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l-~~e~l~-~Lk~aG~~~i 172 (348)
..++++..+.++.+.+. ++..|-+.|. +. ..+.+.+.++++..++.|+.++++.|.. +.+.+. .+...|.+|+
T Consensus 145 ~~~~~~a~~~l~~a~~~~~~vvG~dL~g~-E~--~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rI 221 (343)
T 3rys_A 145 DMSEDSALEVLDQLLAMHAPIAGIGLDSA-EV--GNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVERI 221 (343)
T ss_dssp TSCHHHHHHHHHHHHHTTCCCCEEEEESC-CT--TCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCCSEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEecCCc-cc--CCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCccee
Confidence 35667666666665543 5666766664 22 2244667788888888899988888743 344444 4545899999
Q ss_pred eccCCC
Q psy8190 173 NHNLDT 178 (348)
Q Consensus 173 ~~g~et 178 (348)
.+|+..
T Consensus 222 gHgv~l 227 (343)
T 3rys_A 222 DHGIRC 227 (343)
T ss_dssp EECGGG
T ss_pred eeeeee
Confidence 888755
No 194
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=70.52 E-value=13 Score=32.81 Aligned_cols=64 Identities=9% Similarity=0.051 Sum_probs=45.3
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
++++++.+.|+..|.+.- .+.+.+.+.++.++.. .+.+.++ |-++.+.+..+.+.|+|.+++|-
T Consensus 205 eea~eal~aGaD~I~LDn-------~~~~~~~~~v~~l~~~~~~v~ieaS-GGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDN-------FAVWQTQTAVQRRDSRAPTVMLESS-GGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHGGGCCSEEEEET-------CCHHHHHHHHHHHHHHCTTCEEEEE-SSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEECC-------CCHHHHHHHHHHhhccCCCeEEEEE-CCCCHHHHHHHHhcCCCEEEECH
Confidence 344455567888766632 2347788888888763 4555555 45889999999999999999864
No 195
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=70.48 E-value=8.6 Score=32.74 Aligned_cols=64 Identities=11% Similarity=0.024 Sum_probs=42.6
Q ss_pred HHHHhCCCCEEEEec-cCC---CCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 108 QKAKSDGATRFCMGA-AWR---ELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 108 ~~~~~~G~~~i~l~g-g~~---~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+.+.+.|++.|.+.- |.+ .....++ ++++.+++.++++..+.|..+.+.+..+.++|++.+.+|
T Consensus 143 ~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~----~li~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 143 ISCHQKGIEFIGTTLSGYTGPITPVEPDL----AMVTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp HHHHHTTCSEEECTTTTSSSSCCCSSCCH----HHHHHHHTTTCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHhCCCCEEEecCccCCCCCcCCCCCH----HHHHHHHHcCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 445677988874321 111 1112233 444555544788888888889999999999999999987
No 196
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=70.46 E-value=24 Score=33.68 Aligned_cols=127 Identities=11% Similarity=0.081 Sum_probs=78.0
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC-
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT- 178 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et- 178 (348)
+..+.++.+.+.|+..|.|... .+. ...+.++++.+++. ++.+.+ .+..+.+.++.+.++|+|.+.++...
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a--~g~---~~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTA--HGH---SKGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAGADAVKVGIGPG 302 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECS--CCS---BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEEEECSSCS
T ss_pred chHHHHHHHhhcccceEEeccc--CCc---chhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcCCCEEEECCCCC
Confidence 4455667777889999888765 221 25677888888874 455543 22678899999999999999986543
Q ss_pred C---HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 179 S---PKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 179 ~---~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
+ .+.....+. -..+.+.+..+.+++.++++.++ |=-.+.+|+.+.+. ++ .+.+.+-
T Consensus 303 s~~~t~~~~g~g~-p~~~~l~~v~~~~~~~~iPVIa~---GGI~~~~di~kal~----~G--Ad~V~vG 361 (490)
T 4avf_A 303 SICTTRIVAGVGV-PQISAIANVAAALEGTGVPLIAD---GGIRFSGDLAKAMV----AG--AYCVMMG 361 (490)
T ss_dssp TTCHHHHHTCBCC-CHHHHHHHHHHHHTTTTCCEEEE---SCCCSHHHHHHHHH----HT--CSEEEEC
T ss_pred cCCCccccCCCCc-cHHHHHHHHHHHhccCCCcEEEe---CCCCCHHHHHHHHH----cC--CCeeeec
Confidence 2 122222221 24455566666666667765322 11236777776654 45 5555543
No 197
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=70.32 E-value=9.1 Score=32.62 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=42.5
Q ss_pred HHHHHhCCCCEEEEec-cCC---CCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGA-AWR---ELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~g-g~~---~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.+.- |.+ .....+++ +++.+++.++++..+.|..+.+.+..+.++|++.+.+|
T Consensus 142 a~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~----~i~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 142 GLACQRLGADIIGTTMSGYTTPDTPEEPDLP----LVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp HHHHHHTTCSEEECTTTTSSSSSCCSSCCHH----HHHHHHHTTCCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHhCCCCEEEEcCccCCCCCCCCCCCHH----HHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEEe
Confidence 3445677988774321 111 11122343 34444444788888888889999999999999999987
No 198
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=70.18 E-value=59 Score=28.88 Aligned_cols=127 Identities=11% Similarity=0.067 Sum_probs=79.7
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+ ..+...++|
T Consensus 41 ~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~-~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 119 (315)
T 3na8_A 41 GLDLPALGRSIERLIDGGVHAIAPLGSTGEGA-YLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLG 119 (315)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEECSSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 367889999999999999999887664 3433 45666667777766552 46677777744 344 445566779
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec-CCCHHHHHHHHHHH-Hhc
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL-SESRDQRAELIFQL-ANL 234 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl-get~e~~~~~l~~l-~~l 234 (348)
+|.+.+-.- .|. ..+.+..++-++.+.+ .++++..+-+-+. |-+.. .+++..| .+.
T Consensus 120 adavlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~--~~~~~~L~a~~ 178 (315)
T 3na8_A 120 AEAVMVLPI----SYW----KLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMS--VELILRIVREV 178 (315)
T ss_dssp CSEEEECCC----CSS----CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCC--HHHHHHHHHHS
T ss_pred CCEEEECCC----CCC----CCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCC--HHHHHHHHhcC
Confidence 999875331 111 1256777777777655 5787766655554 43332 1344444 444
No 199
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=70.14 E-value=50 Score=28.05 Aligned_cols=140 Identities=9% Similarity=0.094 Sum_probs=81.6
Q ss_pred cCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHH----HH
Q psy8190 153 LGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAE----LI 228 (348)
Q Consensus 153 ~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~----~l 228 (348)
.|.++ ...|+++|++.+.+|- ...+.+. +-+-+.+-+.++.+.++|+.+ |+=.|||.+++.. +.
T Consensus 69 TGEiS---~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~~~t~ 136 (233)
T 2jgq_A 69 TGEIT---SKHLEELKIHTLLIGH----SERRTLL-KESPSFLKEKFDFFKSKNFKI----VYCIGEELTTREKGFKAVK 136 (233)
T ss_dssp TTCCB---HHHHHHTTCCEEEECC----HHHHHTT-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHHCHHHHH
T ss_pred cCccC---HHHHHHcCCCEEEeCc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCchhHH
Confidence 44555 5678999999999876 2222221 346777788899999999964 3333799887665 22
Q ss_pred HHH-HhcCC-CCC-eeeccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCceeccccccccchhhHHHHHHhC
Q psy8190 229 FQL-ANLNP-YPE-SVPINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITM-PTSRIRMSAGRKEMGETTQAFCFLAG 302 (348)
Q Consensus 229 ~~l-~~l~~-~~~-~i~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~l-p~~~i~~s~g~~~l~~~~~~~~l~~G 302 (348)
+.+ +++.. ..+ .-.+-.|-|. =||- ..++++..-++.+..|..+ ++..|-. +|-.+- .+...++...+
T Consensus 137 ~vv~~Ql~~l~~~~~~~vIAYEPvWAIGTG----~~At~e~a~ev~~~IR~~l~~~vrIlY-GGSV~~-~N~~~l~~~~d 210 (233)
T 2jgq_A 137 EFLSEQLENIDLNYPNLVVAYEPIWAIGTK----KSASLEDIYLTHGFLKQILNQKTPLLY-GGSVNT-QNAKEILGIDS 210 (233)
T ss_dssp HHHHHHHTTSCTTCTTEEEEECCGGGTTC------CCCHHHHHHHHHHHHHHSCTTSCEEE-ESSCCT-TTHHHHHTSTT
T ss_pred HHHHHHHHhhhhhccceEEEEeCHHHhCCC----CCCCHHHHHHHHHHHHHHHhcCCcEEE-cCCcCh-hhHHHHhcCCC
Confidence 222 12220 011 0001112221 2443 4579999999999999998 4433432 333332 34455666789
Q ss_pred cceeeeCC
Q psy8190 303 ANSIFYGD 310 (348)
Q Consensus 303 An~~~~~~ 310 (348)
+|+++.|.
T Consensus 211 iDG~LVGg 218 (233)
T 2jgq_A 211 VDGLLIGS 218 (233)
T ss_dssp CCEEEESG
T ss_pred CCeeEecH
Confidence 99987764
No 200
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=70.03 E-value=3.8 Score=39.10 Aligned_cols=36 Identities=14% Similarity=0.071 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHH
Q psy8190 191 DYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAE 226 (348)
Q Consensus 191 ~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~ 226 (348)
+.++..+.++.||+.|++|..++++.+ +....-+.+
T Consensus 101 t~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~ 137 (488)
T 2wc7_A 101 GNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHD 137 (488)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCcCCCcCHHHHH
Confidence 678999999999999999999999999 655443333
No 201
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=69.99 E-value=26 Score=30.88 Aligned_cols=73 Identities=18% Similarity=0.126 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecC--C-C-CHHHHHHHHHhCCCeeec
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLG--M-L-NENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g--~-l-~~e~l~~Lk~aG~~~i~~ 174 (348)
..+.+.+.++.+++.|+..|+|+--.. ....+.+...++++..+. +.++.+.- . . ..+-++.|.+.|+++|.-
T Consensus 109 E~~~M~~dI~~~~~~GAdGvVfG~L~~-dg~iD~~~~~~Li~~a~~--l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILT 185 (287)
T 3iwp_A 109 EIEVMKADIRLAKLYGADGLVFGALTE-DGHIDKELCMSLMAICRP--LPVTFHRAFDMVHDPMAALETLLTLGFERVLT 185 (287)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBCT-TSCBCHHHHHHHHHHHTT--SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeeCC-CCCcCHHHHHHHHHHcCC--CcEEEECchhccCCHHHHHHHHHHcCCCEEEC
Confidence 356666778888899999999964211 123678888888887764 45555432 1 1 346789999999999985
No 202
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=69.87 E-value=21 Score=30.48 Aligned_cols=74 Identities=11% Similarity=0.065 Sum_probs=44.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
++.+++...++...+.|.+.|--+.|.......+.+.+.- +.+++ .++.+-++.|..+.+.+..|.++|.+|+-
T Consensus 145 L~~e~i~~a~ria~eaGADfVKTsTG~~~~~gAt~~dv~l--~~m~~~v~v~VKaaGGirt~~~al~~i~aGa~RiG 219 (234)
T 1n7k_A 145 WDDKTLSLLVDSSRRAGADIVKTSTGVYTKGGDPVTVFRL--ASLAKPLGMGVKASGGIRSGIDAVLAVGAGADIIG 219 (234)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEESCCSSSCCCCSHHHHHHH--HHHHGGGTCEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCHHHHHH--HHHHHHHCCCEEEecCCCCHHHHHHHHHcCccccc
Confidence 4567777777777788888776655522101223333222 00222 12667777787788888878888888764
No 203
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=69.85 E-value=44 Score=29.52 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=71.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+..+++|+
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTTGESP-TTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGA 112 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTTT-TSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCC
Confidence 67888999999999999999887664 4443 45666667777766542 477777777544 444 445566799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
|.+.+-.- .|. ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 113 davlv~~P----~y~----~~~~~~l~~~f~~ia~a~~lPiilYn~P~~ 153 (304)
T 3cpr_A 113 DGLLVVTP----YYS----KPSQEGLLAHFGAIAAATEVPICLYDIPGR 153 (304)
T ss_dssp SEEEEECC----CSS----CCCHHHHHHHHHHHHHHCCSCEEEEECHHH
T ss_pred CEEEECCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 98875321 121 1256677777766554 5777765555443
No 204
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=69.83 E-value=6.4 Score=38.53 Aligned_cols=64 Identities=13% Similarity=0.152 Sum_probs=47.1
Q ss_pred HHHHHHHHhCCCeeeccC--CC-CHHHH-----hccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-SPKLY-----GDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRD 222 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~~e~l-----~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e 222 (348)
+.|..|++.|++.|.+.. ++ ..--| -.+.+. .+.++..+.++.+|+.|+.|..++++.+ +....
T Consensus 176 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~ 249 (583)
T 1ea9_C 176 DHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFP 249 (583)
T ss_dssp HTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTH
T ss_pred HhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCCCccH
Confidence 567888999999988752 32 11112 234333 3789999999999999999999999999 65443
No 205
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=69.77 E-value=27 Score=29.02 Aligned_cols=67 Identities=9% Similarity=-0.009 Sum_probs=43.3
Q ss_pred HHHhCCCCEEEEeccCCCCC-c-cc-HHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 109 KAKSDGATRFCMGAAWRELK-D-RD-LDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 109 ~~~~~G~~~i~l~gg~~~~~-~-~~-~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+.+.|+..+.++..+.+.. . .. ...-.+.++.+++ .++++.+..|..+.+.+..+.++|++.+-+|
T Consensus 134 ~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 134 NAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp HHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 45677888775432211110 1 10 1223455666665 4788888888879999999999999998876
No 206
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=69.75 E-value=22 Score=33.95 Aligned_cols=69 Identities=13% Similarity=0.091 Sum_probs=49.8
Q ss_pred HHHHHhCCCCEEEEeccCCCCC---------cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAAWRELK---------DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~~---------~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.++.|+.+.. ......+.++.+.+++.++++.+..|..+.+.+..+..+|.+.+-+|
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeec
Confidence 4556778999988753321110 12345566666666666899999999999999999999999999886
No 207
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=69.74 E-value=27 Score=29.71 Aligned_cols=69 Identities=13% Similarity=0.009 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-c-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 99 SIESVITAAQKAKS-DGATRFCMGAAWRELKDRDLDNIENMICEVKK-I-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 99 ~~eei~~~~~~~~~-~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+++.+...++...+ .|..-|++.+.+. .. ..++++++++ . ++++.+-.|..+.|.++.+.+ |++++-+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~~G~---~~----~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEYSGT---YG----NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECTTS---CC----CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeCCCC---cc----hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 56556666655543 3668888876322 11 3456666665 4 788999999999999999999 99999875
No 208
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=69.32 E-value=50 Score=27.75 Aligned_cols=160 Identities=10% Similarity=0.032 Sum_probs=93.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.++++.++.++.+.+.|++-|-+.-- ++ .. .+.++.+++. ++.+.... .++.+.++...++|.+.+..+
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k--~~--~~----~~~i~~l~~~~~~l~vgaGt-vl~~d~~~~A~~aGAd~v~~p 96 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR--SE--AA----ADAIRLLRANRPDFLIAAGT-VLTAEQVVLAKSSGADFVVTP 96 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT--ST--TH----HHHHHHHHHHCTTCEEEEES-CCSHHHHHHHHHHTCSEEECS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc--Cc--hH----HHHHHHHHHhCcCcEEeeCc-EeeHHHHHHHHHCCCCEEEEC
Confidence 56788888889999999998877532 22 12 3345545442 34443333 568899999999999998654
Q ss_pred CCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCC
Q psy8190 176 LDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLY 255 (348)
Q Consensus 176 ~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~ 255 (348)
+++ .+.++.+++.|..+ +.| -.|+++... +.+.+ .+.+.+++ ..+
T Consensus 97 -~~d----------------~~v~~~ar~~g~~~----i~G-v~t~~e~~~----A~~~G--ad~vk~Fp-----a~~-- 141 (224)
T 1vhc_A 97 -GLN----------------PKIVKLCQDLNFPI----TPG-VNNPMAIEI----ALEMG--ISAVKFFP-----AEA-- 141 (224)
T ss_dssp -SCC----------------HHHHHHHHHTTCCE----ECE-ECSHHHHHH----HHHTT--CCEEEETT-----TTT--
T ss_pred -CCC----------------HHHHHHHHHhCCCE----Eec-cCCHHHHHH----HHHCC--CCEEEEee-----Ccc--
Confidence 333 34466778888764 335 346666543 45677 88888833 111
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHh-CcceeeeCCee
Q psy8190 256 GSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLA-GANSIFYGDKL 312 (348)
Q Consensus 256 ~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~-GAn~~~~~~~~ 312 (348)
... ...+...+-.+|+..+-..+|- + .+.....+.+ |+..+. +..+
T Consensus 142 ----~gG---~~~lk~l~~~~~~ipvvaiGGI-~--~~N~~~~l~agga~~v~-gS~i 188 (224)
T 1vhc_A 142 ----SGG---VKMIKALLGPYAQLQIMPTGGI-G--LHNIRDYLAIPNIVACG-GSWF 188 (224)
T ss_dssp ----TTH---HHHHHHHHTTTTTCEEEEBSSC-C--TTTHHHHHTSTTBCCEE-ECGG
T ss_pred ----ccC---HHHHHHHHhhCCCCeEEEECCc-C--HHHHHHHHhcCCCEEEE-Echh
Confidence 111 2444555556665433333432 1 2223335666 777775 5434
No 209
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=69.31 E-value=56 Score=28.27 Aligned_cols=176 Identities=10% Similarity=0.107 Sum_probs=105.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEec----CCCCH----HHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTL----GMLNE----NQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~----g~l~~----e~l~~Lk~aG~ 169 (348)
.+.++|.+.++++.+.|+..||+..+ .... ..+.++..++.+++-. |..+. ...+...+.|.
T Consensus 56 ~t~~~I~~lc~eA~~~~~aaVCV~p~-------~V~~---a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 125 (260)
T 3r12_A 56 ATPDDIKKLCLEARENRFHGVCVNPC-------YVKL---AREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGA 125 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECGG-------GHHH---HHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH-------HHHH---HHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCC
Confidence 67899999999999999999988322 2222 2334455567776533 33332 23444556699
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHc--CCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeecccc
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV--GINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNL 246 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~--G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l 246 (348)
+-|.+-+.- ..++ ..+++...+-++.++++ |. ..-+|+-- --|.+++....+...+.+ .+.|.-+.
T Consensus 126 dEIDmViNi--g~lk----~g~~~~v~~eI~~v~~a~~~~--~lKVIlEt~~Lt~eei~~A~~ia~eaG--ADfVKTST- 194 (260)
T 3r12_A 126 DEIDMVINV--GMLK----AKEWEYVYEDIRSVVESVKGK--VVKVIIETCYLDTEEKIAACVISKLAG--AHFVKTST- 194 (260)
T ss_dssp SEEEEECCH--HHHH----TTCHHHHHHHHHHHHHHTTTS--EEEEECCGGGCCHHHHHHHHHHHHHTT--CSEEECCC-
T ss_pred CEEEEEeeh--hhhc----cccHHHHHHHHHHHHHhcCCC--cEEEEEeCCCCCHHHHHHHHHHHHHhC--cCEEEcCC-
Confidence 988754311 1111 24667777777776664 33 23555544 347888888888888898 88887652
Q ss_pred cccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCccee
Q psy8190 247 VQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSI 306 (348)
Q Consensus 247 ~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~ 306 (348)
-|. ....+.+...-|-... =+...|.+++|-.+. +.....+.+||+.+
T Consensus 195 ------Gf~-~~GAT~edV~lm~~~v---g~~v~VKaAGGIrt~--~~al~mi~aGA~Ri 242 (260)
T 3r12_A 195 ------GFG-TGGATAEDVHLMKWIV---GDEMGVKASGGIRTF--EDAVKMIMYGADRI 242 (260)
T ss_dssp ------SSS-SCCCCHHHHHHHHHHH---CTTSEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred ------CCC-CCCCCHHHHHHHHHHh---CCCceEEEeCCCCCH--HHHHHHHHcCCcee
Confidence 221 1234555443333332 244677888774443 33444689999987
No 210
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=69.25 E-value=9.9 Score=36.60 Aligned_cols=37 Identities=5% Similarity=0.081 Sum_probs=30.9
Q ss_pred HhccC--CC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 183 YGDII--ST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 183 l~~i~--~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
+..+. +. .+.++..+.++.||+.|++|..++++.+ +.
T Consensus 80 ~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 80 WHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp CSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 44555 54 3899999999999999999999999999 54
No 211
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=69.08 E-value=30 Score=33.02 Aligned_cols=126 Identities=11% Similarity=0.074 Sum_probs=78.4
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC-C
Q psy8190 103 VITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-S 179 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et-~ 179 (348)
..+.++.+.+.|+..|.+... .+ ..+.+.++++.+++. ++.+.+ .+..+.+.++.+.++|+|.+.++... +
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a--~g---~~~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSS--HG---HSEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVGIGPGS 305 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECS--CT---TSHHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHTCSEEEECSSCCT
T ss_pred hHHHHHHHHhccCceEEeccc--cc---cchHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhCCCEEEECCCCCc
Confidence 345566677789999988765 22 125678888888874 455543 22578899999999999999875332 1
Q ss_pred ---HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 180 ---PKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 180 ---~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
.+.....+. -.+..+.+..+.+++.++++.++ |=-.+.+|+.+.+. ++ .+.+-+.
T Consensus 306 ~~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa~---GGI~~~~di~kala----~G--Ad~V~iG 363 (496)
T 4fxs_A 306 ICTTRIVTGVGV-PQITAIADAAGVANEYGIPVIAD---GGIRFSGDISKAIA----AG--ASCVMVG 363 (496)
T ss_dssp TBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEE---SCCCSHHHHHHHHH----TT--CSEEEES
T ss_pred CcccccccCCCc-cHHHHHHHHHHHhccCCCeEEEe---CCCCCHHHHHHHHH----cC--CCeEEec
Confidence 233332221 24556667777777777765432 11246777766653 45 5665543
No 212
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=69.00 E-value=8.7 Score=34.19 Aligned_cols=59 Identities=10% Similarity=0.085 Sum_probs=43.4
Q ss_pred HHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 109 KAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 109 ~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.|+..|.+... +++.+.++++.++.. .+.+.++.|. +.+.+..+.++|+|.+.+|
T Consensus 212 ~A~~aGaD~I~ld~~-------~~~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vG 272 (299)
T 2jbm_A 212 QAAEAGADLVLLDNF-------KPEELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMG 272 (299)
T ss_dssp HHHHTTCSEEEEESC-------CHHHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEECT
T ss_pred HHHHcCCCEEEECCC-------CHHHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEEC
Confidence 344568888877432 347777777777652 3677777664 9999999999999999875
No 213
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=68.96 E-value=30 Score=29.55 Aligned_cols=68 Identities=9% Similarity=0.007 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-c-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-I-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+...++...-.+..-|++.+.+.. . ..++++++++ . ++++.+-.|..+.|.++.+.+ |++++-+|
T Consensus 141 ~~~~~~~a~~g~~~~~~~VYl~s~G~~---~----~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVG 210 (240)
T 1viz_A 141 MDDIVAYARVSELLQLPIFYLEYSGVL---G----DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVG 210 (240)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECTTSC---C----CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEEC
T ss_pred HHHHHHHHHhCcccCCCEEEEeCCCcc---C----hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEC
Confidence 454544444333345677777763221 1 3466677766 4 688999999999999999999 99999875
No 214
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=68.89 E-value=11 Score=33.08 Aligned_cols=59 Identities=10% Similarity=-0.007 Sum_probs=42.9
Q ss_pred HHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 109 KAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 109 ~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.|+..|.+... +++.+.++++.++.. ++.+.++.| ++.+.+..+.++|+|.+.+|
T Consensus 197 ~A~~aGaD~I~ld~~-------~~~~l~~~v~~l~~~~~~~~i~AsGG-I~~~ni~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 197 NAMNAGADIVMCDNL-------SVLETKEIAAYRDAHYPFVLLEASGN-ISLESINAYAKSGVDAISVG 257 (273)
T ss_dssp HHHHHTCSEEEEETC-------CHHHHHHHHHHHHHHCTTCEEEEESS-CCTTTHHHHHTTTCSEEECT
T ss_pred HHHHcCCCEEEECCC-------CHHHHHHHHHHhhccCCCcEEEEECC-CCHHHHHHHHHcCCcEEEEc
Confidence 334568888877432 346777777777652 367776666 49999999999999999875
No 215
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=68.80 E-value=39 Score=29.89 Aligned_cols=111 Identities=15% Similarity=0.205 Sum_probs=72.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+...++|+
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGSTGEAF-VQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGF 107 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeeccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCC
Confidence 67888999999999999999888764 3433 45666667777766542 477777777544 444 445566799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cC-CeeeEeEeeec
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VG-INICCGGIIGL 217 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G-~~i~~~~i~Gl 217 (348)
|.+.+-.- .|. ..+.+...+-++.+.+ .+ +++..+-+-+.
T Consensus 108 davlv~~P----~y~----~~s~~~l~~~f~~va~a~~~lPiilYn~P~~ 149 (303)
T 2wkj_A 108 DAVSAVTP----FYY----PFSFEEHCDHYRAIIDSADGLPMVVYNIPAL 149 (303)
T ss_dssp SEEEEECC----CSS----CCCHHHHHHHHHHHHHHHTTCCEEEEECHHH
T ss_pred CEEEecCC----CCC----CCCHHHHHHHHHHHHHhCCCCCEEEEeCccc
Confidence 98875321 111 1266777777766555 45 88766655444
No 216
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=68.71 E-value=6.5 Score=38.50 Aligned_cols=69 Identities=12% Similarity=0.093 Sum_probs=49.1
Q ss_pred HHHHHHHHhCCCeeeccC--CC-CH-----HHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-SP-----KLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAEL 227 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~~-----e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~ 227 (348)
+.|..|++.|++.|.+.. ++ .. .-|-.+.+. .+.++..+.++.+|+.||.|..++++.+ +.....+.+.
T Consensus 180 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~ 258 (588)
T 1j0h_A 180 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDV 258 (588)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccchhHHHH
Confidence 567888888998888752 22 11 112234443 3789999999999999999999999999 6554444443
No 217
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=68.63 E-value=33 Score=30.19 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=72.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+ ..+...++|
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 102 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVAVGTTGESA-TLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAG 102 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCcc-cCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 367889999999999999999888665 3433 45667667777766542 46777777754 444 445566779
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. ..+.+..++-++.+.+ .++++..+-+-+.
T Consensus 103 adavlv~~P----~y~----~~~~~~l~~~f~~va~a~~lPiilYn~P~~ 144 (297)
T 3flu_A 103 ADYTLSVVP----YYN----KPSQEGIYQHFKTIAEATSIPMIIYNVPGR 144 (297)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHHHCCSCEEEEECHHH
T ss_pred CCEEEECCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEEEECCch
Confidence 998875321 111 1255677777766655 5777766655444
No 218
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=68.01 E-value=6.4 Score=38.55 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=49.5
Q ss_pred HHHHHHHHhCCCeeeccC--CC-CH-----HHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-SP-----KLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAEL 227 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~~-----e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~ 227 (348)
+.|..|++.|++.|.+.. ++ .. .-|..+.+. .+.++..+.++.+|+.||.|..++++.+ +....-+.+.
T Consensus 177 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~ 255 (585)
T 1wzl_A 177 DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDV 255 (585)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHH
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCCccHHHHHH
Confidence 568899999999998753 22 11 112234443 3789999999999999999999999999 6554433333
No 219
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=67.95 E-value=24 Score=33.71 Aligned_cols=69 Identities=10% Similarity=0.081 Sum_probs=49.9
Q ss_pred HHHHHhCCCCEEEEeccCCCC-C--------cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAAWREL-K--------DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~-~--------~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.+++|.... . ......+.++.+.+++.++++.++.|..+.+.+.....+|.+.+-+|
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEec
Confidence 445667799999876442111 0 12345566666666667899999999999999999999999998876
No 220
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=67.61 E-value=51 Score=27.19 Aligned_cols=175 Identities=10% Similarity=0.024 Sum_probs=91.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEE-E------ecCC---CCHHHHHHHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETC-L------TLGM---LNENQAYRLKK 166 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~-~------~~g~---l~~e~l~~Lk~ 166 (348)
...+...+.++.+.+.|+..+.+.+ . +.++.+++ .++++. . ..+. -+.+.++.+.+
T Consensus 20 ~~~~~~~~~a~~~~~~Ga~~i~~~~---------~----~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~ 86 (223)
T 1y0e_A 20 HSSFIMSKMALAAYEGGAVGIRANT---------K----EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIE 86 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEES---------H----HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCeeeccCC---------H----HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHh
Confidence 4667777778888888998886531 1 23444544 344441 1 0111 35688999999
Q ss_pred hCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHc--CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 167 VGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV--GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 167 aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~--G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
+|++.+.++.+.. ..+..+ ..+.++.+++. |+.+..+ ..|.++.. .+.+.+ .+.+.+.
T Consensus 87 ~Gad~v~l~~~~~------~~p~~~---~~~~i~~~~~~~~~~~v~~~-----~~t~~e~~----~~~~~G--~d~i~~~ 146 (223)
T 1y0e_A 87 SQCEVIALDATLQ------QRPKET---LDELVSYIRTHAPNVEIMAD-----IATVEEAK----NAARLG--FDYIGTT 146 (223)
T ss_dssp HTCSEEEEECSCS------CCSSSC---HHHHHHHHHHHCTTSEEEEE-----CSSHHHHH----HHHHTT--CSEEECT
T ss_pred CCCCEEEEeeecc------cCcccC---HHHHHHHHHHhCCCceEEec-----CCCHHHHH----HHHHcC--CCEEEeC
Confidence 9999998876431 011112 34556666666 6655322 34655533 356676 7776543
Q ss_pred cccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 245 NLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 245 ~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
..-....++ ....... .+..+...+..+ +..+-+.+|-.+ .+.....+.+||+.++.|..+
T Consensus 147 ~~g~t~~~~---~~~~~~~-~~~~~~~~~~~~-~ipvia~GGI~~--~~~~~~~~~~Gad~v~vG~al 207 (223)
T 1y0e_A 147 LHGYTSYTQ---GQLLYQN-DFQFLKDVLQSV-DAKVIAEGNVIT--PDMYKRVMDLGVHCSVVGGAI 207 (223)
T ss_dssp TTTSSTTST---TCCTTHH-HHHHHHHHHHHC-CSEEEEESSCCS--HHHHHHHHHTTCSEEEECHHH
T ss_pred CCcCcCCCC---CCCCCcc-cHHHHHHHHhhC-CCCEEEecCCCC--HHHHHHHHHcCCCEEEEChHH
Confidence 322111111 1101222 233333333333 223333343222 344455678999999887543
No 221
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=67.25 E-value=52 Score=27.16 Aligned_cols=166 Identities=14% Similarity=0.066 Sum_probs=84.1
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcccH---HHHHHHHHHHH-hcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC
Q psy8190 103 VITAAQKAKSDGATRFCMGAAWRELKDRDL---DNIENMICEVK-KIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~~~~~~~~~---~~~~~l~~~i~-~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et 178 (348)
..+.++.+.+.|++.|.+.--+ .+.... ..+.+.++.+. ..++.+.++ +.++...++|++.+.++...
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~--~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~------~~~~~a~~~gad~v~l~~~~ 104 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKG--GDALTGEARIKFAEKAQAACREAGVPFIVN------DDVELALNLKADGIHIGQED 104 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCS--TTCCCHHHHHHHHHHHHHHHHHHTCCEEEE------SCHHHHHHHTCSEEEECTTS
T ss_pred HHHHHHHHHHCCCCEEEEecCC--CCHhHHHHHHHHHHHHHHHHHHcCCeEEEc------CHHHHHHHcCCCEEEECCCc
Confidence 4556666777899998876331 122233 23333333332 246666655 34678889999999875322
Q ss_pred CHHHHhccCCCCCHHHHHHHHHHH-HHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCC
Q psy8190 179 SPKLYGDIISTRDYENRLNTLKNV-RNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYG 256 (348)
Q Consensus 179 ~~e~l~~i~~~~~~~~~~~~i~~~-~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~ 256 (348)
. . +..+ +..|. .++|+ -.|.++. ..+.+.+ .+.+.+.+..|....+- .
T Consensus 105 ~-----------~-------~~~~~~~~g~-----~~~~~s~~t~~e~----~~a~~~g--~d~v~~~~v~~t~~~~~-~ 154 (227)
T 2tps_A 105 A-----------N-------AKEVRAAIGD-----MILGVSAHTMSEV----KQAEEDG--ADYVGLGPIYPTETKKD-T 154 (227)
T ss_dssp S-----------C-------HHHHHHHHTT-----SEEEEEECSHHHH----HHHHHHT--CSEEEECCSSCCCSSSS-C
T ss_pred c-----------C-------HHHHHHhcCC-----cEEEEecCCHHHH----HHHHhCC--CCEEEECCCcCCCCCCC-C
Confidence 1 1 1112 22453 24555 4676653 3344566 78888766555422110 0
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 257 SSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 257 ~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
..+.+. + .+...+...++..+-+.+|- + ..+.. ..+.+||+.+..|..+.
T Consensus 155 ~~~~~~-~---~l~~~~~~~~~~pvia~GGI-~-~~nv~-~~~~~Ga~gv~vgs~i~ 204 (227)
T 2tps_A 155 RAVQGV-S---LIEAVRRQGISIPIVGIGGI-T-IDNAA-PVIQAGADGVSMISAIS 204 (227)
T ss_dssp CCCCTT-H---HHHHHHHTTCCCCEEEESSC-C-TTTSH-HHHHTTCSEEEESHHHH
T ss_pred CCccCH-H---HHHHHHHhCCCCCEEEEcCC-C-HHHHH-HHHHcCCCEEEEhHHhh
Confidence 112222 2 22223333442334344432 1 12233 35678999998776543
No 222
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=66.76 E-value=27 Score=31.36 Aligned_cols=77 Identities=10% Similarity=0.077 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHhC--CCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCC-CHHHH-HHHHHhCCCeeec
Q psy8190 99 SIESVITAAQKAKSD--GATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGML-NENQA-YRLKKVGLDYYNH 174 (348)
Q Consensus 99 ~~eei~~~~~~~~~~--G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l-~~e~l-~~Lk~aG~~~i~~ 174 (348)
++++..+.++.+.+. ++..|=+.|. +. ..+.+.+.++++..++.|+.++++.|.. +.+.+ +.+...|.+|+.+
T Consensus 144 ~~~~a~~~~~~a~~~~~~vvG~dL~g~-E~--~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rigH 220 (326)
T 3pao_A 144 SEEQAQKTLDQALPFRDAFIAVGLDSS-EV--GHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDH 220 (326)
T ss_dssp CHHHHHHHHHHHGGGGGGCSEEEEESC-CT--TCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHHHHHHHTTCCSSEEE
T ss_pred CHHHHHHHHHHHhhccccceeeCCCCC-CC--CCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHHHHHHhcCCCceeee
Confidence 444444444433322 3444545443 11 1123445555555565666666655532 23332 2333456666666
Q ss_pred cCCC
Q psy8190 175 NLDT 178 (348)
Q Consensus 175 g~et 178 (348)
|+..
T Consensus 221 gv~l 224 (326)
T 3pao_A 221 GVRA 224 (326)
T ss_dssp CGGG
T ss_pred eeee
Confidence 5543
No 223
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=66.54 E-value=40 Score=29.78 Aligned_cols=111 Identities=12% Similarity=0.129 Sum_probs=72.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+..+++|+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTTGESP-TLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGV 108 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCC
Confidence 67888999999999999999887664 3433 45666677777766542 466777777543 444 445566799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
|.+.+-.- .|. .-+.+...+-++.+.+ .++++..+-+-+.
T Consensus 109 davlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~ 149 (301)
T 1xky_A 109 DAVMLVAP----YYN----KPSQEGMYQHFKAIAESTPLPVMLYNVPGR 149 (301)
T ss_dssp SEEEEECC----CSS----CCCHHHHHHHHHHHHHTCSSCEEEEECHHH
T ss_pred CEEEEcCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 98875331 111 1266777777777655 4677765555444
No 224
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=66.46 E-value=1.3e+02 Score=31.43 Aligned_cols=194 Identities=13% Similarity=0.035 Sum_probs=103.0
Q ss_pred cHHHHHHHHHHHHhc--CcEEEEecC-CCCH----HHHHHHHHhCCCeeeccCCC-CHHHHhccCC--CCCHHHHHHHHH
Q psy8190 131 DLDNIENMICEVKKI--GLETCLTLG-MLNE----NQAYRLKKVGLDYYNHNLDT-SPKLYGDIIS--TRDYENRLNTLK 200 (348)
Q Consensus 131 ~~~~~~~l~~~i~~~--~~~i~~~~g-~l~~----e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~--~~~~~~~~~~i~ 200 (348)
..+.+.+-++.+++. +..+.++.. ..+. +.++.+.++|+|.|.+++.+ .....+..+. ..+.+...+.++
T Consensus 617 ~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~ 696 (1025)
T 1gte_A 617 TAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICR 696 (1025)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHH
Confidence 345555555666652 455655652 2233 34556667899999998865 3211111111 146778888888
Q ss_pred HHHHc-CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc-cccccC---------------C-CCCCCC-CCCC
Q psy8190 201 NVRNV-GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN-NLVQIK---------------G-TPLYGS-SILD 261 (348)
Q Consensus 201 ~~~~~-G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~-~l~P~~---------------g-T~l~~~-~~~~ 261 (348)
.+++. ++++.+-+..++ +++.+..+.+.+.+ .+.+.+. .+.... | +..... .+..
T Consensus 697 ~v~~~~~~Pv~vK~~~~~----~~~~~~a~~~~~~G--~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~ 770 (1025)
T 1gte_A 697 WVRQAVQIPFFAKLTPNV----TDIVSIARAAKEGG--ADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAI 770 (1025)
T ss_dssp HHHHHCSSCEEEEECSCS----SCHHHHHHHHHHHT--CSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGG
T ss_pred HHHHhhCCceEEEeCCCh----HHHHHHHHHHHHcC--CCEEEEeccccccccccccccccccccccccccCCCCCcccc
Confidence 88875 666655433222 24566677777888 7887763 111110 0 111111 1111
Q ss_pred HHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCC-c----hHHHHHHHHcCCC
Q psy8190 262 PLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTK-T----NDDSKLLKKLGIN 333 (348)
Q Consensus 262 ~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~-~----~~~~~~i~~~G~~ 333 (348)
....+.++...+..+++..|-..+|-.+ ......++.+||+.++.|-.++. .+.. . +++...+...|+.
T Consensus 771 ~~~~~~~v~~v~~~~~~ipvi~~GGI~s--~~da~~~l~~Ga~~v~vg~~~l~-~~~~~~~~~~~~l~~~l~~~G~~ 844 (1025)
T 1gte_A 771 RPIALRAVTTIARALPGFPILATGGIDS--AESGLQFLHSGASVLQVCSAVQN-QDFTVIQDYCTGLKALLYLKSIE 844 (1025)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEESSCCS--HHHHHHHHHTTCSEEEESHHHHT-SCTTHHHHHHHHHHHHHHHTTCG
T ss_pred hhHHHHHHHHHHHHcCCCCEEEecCcCC--HHHHHHHHHcCCCEEEEeecccc-CCccHHHHHHHHHHHHHHHcCCC
Confidence 1122455555555566644444444322 33445567799999987753322 1222 2 3556777888885
No 225
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=66.38 E-value=18 Score=31.68 Aligned_cols=110 Identities=10% Similarity=0.022 Sum_probs=66.7
Q ss_pred ccCHHHHHHHHHHHHhCCCCE-EEEeccCCCCCcccHHHHHHHHHHHHhcCcE-EEEecCCCCHHHHHHHHHhCCCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATR-FCMGAAWRELKDRDLDNIENMICEVKKIGLE-TCLTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~-i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~-i~~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
..+.+|++..++...+ +++. +.+.+..+ .+..+.+...+.+.++-+.|.. +.+.-+....+.++.|.++|+...-+
T Consensus 71 ~vtldem~~h~~aV~r-~~~~~~vvaD~pf-gsY~s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~~GIpv~gH 148 (275)
T 3vav_A 71 PVTLDDIAYHTACVAR-AQPRALIVADLPF-GTYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAH 148 (275)
T ss_dssp TCCHHHHHHHHHHHHH-TCCSSEEEEECCT-TSCSSHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHTTCCEEEE
T ss_pred ccCHHHHHHHHHHHHh-cCCCCCEEEecCC-CCCCCHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHHCCCCEEEe
Confidence 3688999988876654 5653 44444422 2124566666555555444543 55566666778999999999887753
Q ss_pred -cCCC-CHH---HHhccCCC-CCHHHHHHHHHHHHHcCCe
Q psy8190 175 -NLDT-SPK---LYGDIIST-RDYENRLNTLKNVRNVGIN 208 (348)
Q Consensus 175 -g~et-~~e---~l~~i~~~-~~~~~~~~~i~~~~~~G~~ 208 (348)
|+-. +.. -|+...+. ...++.++-.+.+.++|-.
T Consensus 149 lgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~ 188 (275)
T 3vav_A 149 VGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQ 188 (275)
T ss_dssp EESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCS
T ss_pred cCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCC
Confidence 4321 111 13333333 2467889999999999974
No 226
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=66.36 E-value=42 Score=29.36 Aligned_cols=112 Identities=11% Similarity=0.070 Sum_probs=72.5
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+..+++|
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 95 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVGTTGESP-TLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVG 95 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 367888899999999999999887664 3433 45666677777766542 477777777544 443 45556679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 96 adavlv~~P----~y~----~~s~~~l~~~f~~ia~a~~lPiilYn~P~~ 137 (289)
T 2yxg_A 96 ADAVLSITP----YYN----KPTQEGLRKHFGKVAESINLPIVLYNVPSR 137 (289)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred CCEEEECCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 998875321 111 1266777777766554 5777765555444
No 227
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=66.19 E-value=32 Score=32.39 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=56.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCC-------------cc-cHHHHHHHHHHHHh-c--CcEEEEecCCCCHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELK-------------DR-DLDNIENMICEVKK-I--GLETCLTLGMLNENQ 160 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~-------------~~-~~~~~~~l~~~i~~-~--~~~i~~~~g~l~~e~ 160 (348)
.+.+++.+.++.+.+.|+..|.+.++...-. .. ..+.-.++++.+++ . .+++..+.|..+.+.
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 3456888889999999999998876522100 00 02234577777776 3 688888999999999
Q ss_pred HHHHHHhCCCeeecc
Q psy8190 161 AYRLKKVGLDYYNHN 175 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g 175 (348)
+..+..+|.+.|.++
T Consensus 388 A~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 388 ALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHHTTEEEEEES
T ss_pred HHHHHHcCCCEEEEc
Confidence 999999999988764
No 228
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=66.06 E-value=48 Score=30.26 Aligned_cols=78 Identities=14% Similarity=0.021 Sum_probs=55.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCC---------------CCc-ccHHHHHHHHHHHHh-c--CcEEEEecCCCCH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRE---------------LKD-RDLDNIENMICEVKK-I--GLETCLTLGMLNE 158 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~---------------~~~-~~~~~~~~l~~~i~~-~--~~~i~~~~g~l~~ 158 (348)
.+.+++.+.++.+.+.|+..|.+.+.... .+. ...+.-.++++.+++ . .+++..+.|..+.
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~ 310 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSG 310 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCH
Confidence 34568888888888899999877643110 000 112334577777776 3 5888889999999
Q ss_pred HHHHHHHHhCCCeeecc
Q psy8190 159 NQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g 175 (348)
+.+..+.++|.+.|.++
T Consensus 311 ~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 311 QDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 99888888999988765
No 229
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=65.93 E-value=9.1 Score=36.33 Aligned_cols=34 Identities=9% Similarity=0.180 Sum_probs=29.4
Q ss_pred cCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 186 IIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 186 i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
+.+. .+.++..+.++.||+.|+.|..++++.+ +.
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~ 110 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGDVVMNHKGG 110 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCSEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEeccccCC
Confidence 5543 3889999999999999999999999998 64
No 230
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=65.92 E-value=35 Score=29.94 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=72.8
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|++.+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+ ..+..+++|
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (291)
T 3tak_A 18 GVDWKSLEKLVEWHIEQGTNSIVAVGTTGEAS-TLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLG 96 (291)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccccc-cCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 367889999999999999999887665 3433 45667667777766552 46777777754 344 445566779
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 97 adavlv~~P----~y~----~~~~~~l~~~f~~ia~a~~lPiilYn~P~~ 138 (291)
T 3tak_A 97 ADAALLVTP----YYN----KPTQEGLYQHYKAIAEAVELPLILYNVPGR 138 (291)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHHHCCSCEEEEECHHH
T ss_pred CCEEEEcCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEecccc
Confidence 999875321 111 1256677777776655 5787766655444
No 231
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=65.90 E-value=79 Score=28.76 Aligned_cols=182 Identities=14% Similarity=0.055 Sum_probs=94.9
Q ss_pred CcEEEEecCCC-----C-HHHHHHHHHh--CCCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHHHHH-----cCCeeeE
Q psy8190 146 GLETCLTLGML-----N-ENQAYRLKKV--GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRN-----VGINICC 211 (348)
Q Consensus 146 ~~~i~~~~g~l-----~-~e~l~~Lk~a--G~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~-----~G~~i~~ 211 (348)
+..+.++.|-- + ++.++.++.. +.|.+.+++-+ +..-+..+.......+.+++++.+++ ..+++.+
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~v 225 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLV 225 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEE
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEE
Confidence 55677776531 2 3344444444 37899888876 42222222111123344444444322 2445444
Q ss_pred eEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccc-cCCC---CCCC----C-CCCCHHHHHHHHHHHHHHCC-CCce
Q psy8190 212 GGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ-IKGT---PLYG----S-SILDPLEFIRTIAVARITMP-TSRI 281 (348)
Q Consensus 212 ~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P-~~gT---~l~~----~-~~~~~~~~~~~~a~~R~~lp-~~~i 281 (348)
=+- .+.+.+++.+..+.+.+.+ .+.+.+..-.. .+++ ++.. . .++.....++++...+..++ +..|
T Consensus 226 Ki~--p~~~~~~~~~ia~~~~~aG--adgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipv 301 (367)
T 3zwt_A 226 KIA--PDLTSQDKEDIASVVKELG--IDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPI 301 (367)
T ss_dssp EEC--SCCCHHHHHHHHHHHHHHT--CCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCE
T ss_pred EeC--CCCCHHHHHHHHHHHHHcC--CCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceE
Confidence 432 3557788888888899988 88887654321 1111 1111 1 11222334566776676676 3344
Q ss_pred eccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCc-----hHHHHHHHHcCCCc
Q psy8190 282 RMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKT-----NDDSKLLKKLGINT 334 (348)
Q Consensus 282 ~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~-----~~~~~~i~~~G~~p 334 (348)
-..+|-.+ .+.....+.+||+.++.|.-.. ..|+.. +++.+.+.+.|+.-
T Consensus 302 I~~GGI~s--~~da~~~l~~GAd~V~vgra~l-~~gP~~~~~i~~~l~~~m~~~G~~~ 356 (367)
T 3zwt_A 302 IGVGGVSS--GQDALEKIRAGASLVQLYTALT-FWGPPVVGKVKRELEALLKEQGFGG 356 (367)
T ss_dssp EEESSCCS--HHHHHHHHHHTCSEEEESHHHH-HHCTHHHHHHHHHHHHHHHHTTCSS
T ss_pred EEECCCCC--HHHHHHHHHcCCCEEEECHHHH-hcCcHHHHHHHHHHHHHHHHcCCCC
Confidence 44444322 3445567789999997664221 123321 34566777888863
No 232
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=65.79 E-value=33 Score=30.16 Aligned_cols=112 Identities=11% Similarity=0.111 Sum_probs=72.3
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+ ..+...++|
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 97 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESP-TLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALG 97 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccc-cCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcC
Confidence 377889999999999999999888664 4433 45566666777666542 46777777644 344 445566679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. ..+.+..++-++.+.+ .++++..+-+-+.
T Consensus 98 adavlv~~P----~y~----~~~~~~l~~~f~~ia~a~~lPiilYn~P~~ 139 (292)
T 3daq_A 98 ADAIMLITP----YYN----KTNQRGLVKHFEAIADAVKLPVVLYNVPSR 139 (292)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHHHHCSCEEEEECHHH
T ss_pred CCEEEECCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEEEecccc
Confidence 998875331 111 1255667777766554 5788766655444
No 233
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=65.74 E-value=38 Score=29.80 Aligned_cols=113 Identities=10% Similarity=0.043 Sum_probs=74.7
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+...++|
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 98 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGC-SVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAG 98 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcC
Confidence 367888999999999999999887664 3433 46677778888877753 356666666543 443 44555679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-c---CCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-V---GINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~---G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. +..+.+...+-++.+.+ . ++++..+-+-+.
T Consensus 99 adavlv~~P----~y~---~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~ 144 (294)
T 3b4u_A 99 ARNILLAPP----SYF---KNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSV 144 (294)
T ss_dssp CSEEEECCC----CSS---CSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHH
T ss_pred CCEEEEcCC----cCC---CCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcch
Confidence 998875431 121 11266777777777655 4 788766655444
No 234
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=65.48 E-value=71 Score=28.04 Aligned_cols=194 Identities=14% Similarity=0.082 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHh-cCcEEEEecCCCCH----HHHHHHHHhCCC---eeeccCCCCHHHHhccCC-CCCHHHHHHHHHHH
Q psy8190 132 LDNIENMICEVKK-IGLETCLTLGMLNE----NQAYRLKKVGLD---YYNHNLDTSPKLYGDIIS-TRDYENRLNTLKNV 202 (348)
Q Consensus 132 ~~~~~~l~~~i~~-~~~~i~~~~g~l~~----e~l~~Lk~aG~~---~i~~g~et~~e~l~~i~~-~~~~~~~~~~i~~~ 202 (348)
.+.+.+.++..+. .+..+.++.+..+. +.++.+.++|+| .|.+++-+ |.. +.-.. +.+.+...+.++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~-P~~-~g~~~~g~~~~~~~~ii~~v 155 (314)
T 2e6f_A 78 FDFYLKYASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSC-PNV-PGKPQVAYDFEAMRTYLQQV 155 (314)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCC-CCS-TTCCCGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCC-CCC-CCchhhcCCHHHHHHHHHHH
Confidence 4455444443322 24566667654444 345667788999 88888754 111 11000 23777788888888
Q ss_pred HHc-CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeeccccc-------ccCCCCCCC-------C-CCCCHHHHH
Q psy8190 203 RNV-GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLV-------QIKGTPLYG-------S-SILDPLEFI 266 (348)
Q Consensus 203 ~~~-G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~-------P~~gT~l~~-------~-~~~~~~~~~ 266 (348)
++. ++++.+-+- .+-+.++..+.++.+.+.+. ++.+.+.... +..+.|... . .+......+
T Consensus 156 r~~~~~Pv~vK~~--~~~~~~~~~~~a~~~~~aG~-~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~ 232 (314)
T 2e6f_A 156 SLAYGLPFGVKMP--PYFDIAHFDTAAAVLNEFPL-VKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTAL 232 (314)
T ss_dssp HHHHCSCEEEEEC--CCCCHHHHHHHHHHHHTCTT-EEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHH
T ss_pred HHhcCCCEEEEEC--CCCCHHHHHHHHHHHHhcCC-ceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHH
Confidence 875 665544322 23467777777777776651 3444433221 001111100 0 011112334
Q ss_pred HHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCc-----hHHHHHHHHcCCC
Q psy8190 267 RTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKT-----NDDSKLLKKLGIN 333 (348)
Q Consensus 267 ~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~-----~~~~~~i~~~G~~ 333 (348)
..+...+..+|+..|-..+|-.+ .+.....+.+||+.++.|.-+.. .|+.. ++..+.+.+.|+.
T Consensus 233 ~~i~~v~~~~~~ipvi~~GGI~~--~~da~~~l~~GAd~V~ig~~~l~-~~p~~~~~i~~~l~~~~~~~g~~ 301 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGCGGVYS--GEDAFLHILAGASMVQVGTALQE-EGPGIFTRLEDELLEIMARKGYR 301 (314)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCS--HHHHHHHHHHTCSSEEECHHHHH-HCTTHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCC--HHHHHHHHHcCCCEEEEchhhHh-cCcHHHHHHHHHHHHHHHHcCCC
Confidence 55555555555544444443222 33445567899999977653321 23331 3556677888885
No 235
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=65.47 E-value=52 Score=27.98 Aligned_cols=69 Identities=14% Similarity=0.027 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-c-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 99 SIESVITAAQKAKS-DGATRFCMGAAWRELKDRDLDNIENMICEVKK-I-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 99 ~~eei~~~~~~~~~-~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+++++...+..+.+ .|..-||+.+.+.+ . + .++++++++ . +.++.+-.|..++|.++.+.+ |.|.+-+|
T Consensus 143 ~~e~iaa~A~~a~~~~g~~~vY~e~sG~~--g-~----~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVG 214 (235)
T 3w01_A 143 TTEDLEAYAQMVNHMYRLPVMYIEYSGIY--G-D----VSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVG 214 (235)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECTTSC--C-C----HHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEecCCCc--C-C----HHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEEC
Confidence 57777777664444 48888888664332 1 2 567777777 3 678888999999999999998 99999876
No 236
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=65.34 E-value=65 Score=27.54 Aligned_cols=114 Identities=17% Similarity=0.171 Sum_probs=62.7
Q ss_pred HHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEe-c-----------------CCCC-----------H
Q psy8190 108 QKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLT-L-----------------GMLN-----------E 158 (348)
Q Consensus 108 ~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~-~-----------------g~l~-----------~ 158 (348)
+.+.+.|++.|-+.... +...+.+.+.++.+.+++.++.+... . +..+ .
T Consensus 28 ~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 105 (290)
T 3tva_A 28 EVAQDLKVPTVQVHAPH--PHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMK 105 (290)
T ss_dssp HHHHHTTCSEEEEECCC--GGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHH
T ss_pred HHHHHcCCCEEEecCCC--CCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHH
Confidence 34557799998776531 11234567777778888888887542 1 1112 1
Q ss_pred HHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCH----HHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHH
Q psy8190 159 NQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDY----ENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQL 231 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~----~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l 231 (348)
..++..++.|+..|.+.....++- ....+ +...+..+.+++.|+.+...-. .++.+++.+.++.+
T Consensus 106 ~~i~~a~~lG~~~v~~~~G~~~~~-----~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~---~~~~~~~~~l~~~~ 174 (290)
T 3tva_A 106 EISDFASWVGCPAIGLHIGFVPES-----SSPDYSELVRVTQDLLTHAANHGQAVHLETG---QESADHLLEFIEDV 174 (290)
T ss_dssp HHHHHHHHHTCSEEEECCCCCCCT-----TSHHHHHHHHHHHHHHHHHHTTTCEEEEECC---SSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCccc-----chHHHHHHHHHHHHHHHHHHHcCCEEEEecC---CCCHHHHHHHHHhc
Confidence 345555666999887643221110 11122 2333444556667887765543 35666655555443
No 237
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=65.33 E-value=8 Score=32.90 Aligned_cols=66 Identities=9% Similarity=0.169 Sum_probs=43.9
Q ss_pred HHHHHHhCCCCEEEEeccCCC--CCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHh---CCCeeecc
Q psy8190 106 AAQKAKSDGATRFCMGAAWRE--LKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKV---GLDYYNHN 175 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~~--~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~a---G~~~i~~g 175 (348)
.++.+.+.|+..|++.+.... ....+ .++++++++ .++++.++.|.-+.+.+..+.++ |++.+-+|
T Consensus 151 ~~~~~~~~G~~~i~~~~~~~~~~~~g~~----~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 151 TLDRLNKEGCARYVVTDIAKDGTLQGPN----LELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp HHHHHHHTTCCCEEEEEC-------CCC----HHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HHHHHHhCCCCEEEEeccCcccccCCCC----HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeee
Confidence 344556689998877653111 11123 344455554 37888888888888999999999 99988765
No 238
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=65.26 E-value=9.4 Score=36.23 Aligned_cols=34 Identities=0% Similarity=0.095 Sum_probs=29.3
Q ss_pred cCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 186 IIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 186 i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
+.+. .+.++..+.++.||+.|+.|..++++.+ +.
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 106 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVLNHKAG 106 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEccCcccC
Confidence 5443 3899999999999999999999999998 64
No 239
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=65.26 E-value=44 Score=29.36 Aligned_cols=111 Identities=15% Similarity=0.082 Sum_probs=71.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+...++|+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESP-TLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 67888899999999999999887664 3433 45666667777766542 477777777544 444 445556799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
|.+.+-.- .|. ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 97 davlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~ 137 (294)
T 2ehh_A 97 DGALVVVP----YYN----KPTQRGLYEHFKTVAQEVDIPIIIYNIPSR 137 (294)
T ss_dssp SEEEEECC----CSS----CCCHHHHHHHHHHHHHHCCSCEEEEECHHH
T ss_pred CEEEECCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 98875321 111 1256667766666554 5677665555444
No 240
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=65.23 E-value=10 Score=35.63 Aligned_cols=60 Identities=12% Similarity=0.180 Sum_probs=41.6
Q ss_pred HHHHHHhCCCeeeccC--CC-CH----HHH----hccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCC
Q psy8190 161 AYRLKKVGLDYYNHNL--DT-SP----KLY----GDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SES 220 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~--et-~~----e~l----~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get 220 (348)
+..|++.|++.|.+.. ++ .. .-| -.+.+. .+.++..+.++.||+.|++|..++++.+ +..
T Consensus 21 ldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~~ 93 (448)
T 1g94_A 21 EQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAG 93 (448)
T ss_dssp HHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEECSEECSS
T ss_pred HHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeeccccCC
Confidence 4566777777777642 22 11 122 134443 3889999999999999999999999998 543
No 241
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=65.14 E-value=79 Score=28.49 Aligned_cols=195 Identities=12% Similarity=0.052 Sum_probs=102.5
Q ss_pred cHHHHHHHHHHHH-h-cCcEEEEecCCCCHHH----HHHHHHhCCC-eeeccCCC-CHHHHhccCCCCCHHHHHHHHHHH
Q psy8190 131 DLDNIENMICEVK-K-IGLETCLTLGMLNENQ----AYRLKKVGLD-YYNHNLDT-SPKLYGDIISTRDYENRLNTLKNV 202 (348)
Q Consensus 131 ~~~~~~~l~~~i~-~-~~~~i~~~~g~l~~e~----l~~Lk~aG~~-~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~ 202 (348)
..+.+.+-++... + .+..+.++.+..+.+. ++.+.++|.+ .+.+++-+ ...-...+ ..+.+...+.++.+
T Consensus 111 G~~~~~~~l~~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l--~~~~e~l~~il~av 188 (345)
T 3oix_A 111 GINYYLDYVTELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQI--AYDFETTDQILSEV 188 (345)
T ss_dssp CHHHHHHHHHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCG--GGCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhh--cCCHHHHHHHHHHH
Confidence 4666666665543 2 3556667766555543 3455556887 78888876 42211111 24677788888888
Q ss_pred HHc-CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc-----cccccCCCCCC-------CC-CCCCHHHHHHH
Q psy8190 203 RNV-GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN-----NLVQIKGTPLY-------GS-SILDPLEFIRT 268 (348)
Q Consensus 203 ~~~-G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~-----~l~P~~gT~l~-------~~-~~~~~~~~~~~ 268 (348)
++. .+++.+-+-. +.+.+++.+.++.+..-+ ++.+... .+.....++.. .. .++.....+++
T Consensus 189 ~~~~~~PV~vKi~p--~~~~~~~a~~~~~aga~~--i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~ 264 (345)
T 3oix_A 189 FTYFTKPLGIKLPP--YFDIVHFDQAAAIFNXYP--LTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALAN 264 (345)
T ss_dssp TTTCCSCEEEEECC--CCCHHHHHHHHHHHTTSC--CSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHH
T ss_pred HHHhCCCeEEEECC--CCCHHHHHHHHHHhCCCc--eEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHH
Confidence 774 4554443333 346677777666655444 4433211 01111222211 11 12223334666
Q ss_pred HHHHHHHCC-CCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCc-----hHHHHHHHHcCCCc
Q psy8190 269 IAVARITMP-TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKT-----NDDSKLLKKLGINT 334 (348)
Q Consensus 269 ~a~~R~~lp-~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~-----~~~~~~i~~~G~~p 334 (348)
+...+..++ +..|-..+|-.+ .+.....+.+||+.++.+--+ ...|+.. +++.+.+.+.|+.-
T Consensus 265 v~~i~~~~~~~ipIIg~GGI~s--~~da~~~l~aGAd~V~igra~-~~~gP~~~~~i~~~L~~~l~~~G~~s 333 (345)
T 3oix_A 265 VHAFYKRLNPSIQIIGTGGVXT--GRDAFEHILCGASMVQIGTAL-HQEGPQIFKRITKELXAIMTEKGYET 333 (345)
T ss_dssp HHHHHTTSCTTSEEEEESSCCS--HHHHHHHHHHTCSEEEESHHH-HHHCTHHHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHcCCCCcEEEECCCCC--hHHHHHHHHhCCCEEEEChHH-HhcChHHHHHHHHHHHHHHHHcCCCC
Confidence 666666665 333433443222 334455678999999766421 1123321 35566778888863
No 242
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=65.12 E-value=22 Score=30.56 Aligned_cols=126 Identities=10% Similarity=0.033 Sum_probs=67.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccC-CCCCcccHHHHHHHHHHHHhcCcEEEEe-cCC---CC---H-------HHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAW-RELKDRDLDNIENMICEVKKIGLETCLT-LGM---LN---E-------NQAY 162 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~-~~~~~~~~~~~~~l~~~i~~~~~~i~~~-~g~---l~---~-------e~l~ 162 (348)
.+.++.++. +.+.|++.|-+.+.. ..+...+...+.++.+.+++.|+.+... +.. .+ + ..++
T Consensus 15 ~~~~~~l~~---~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (286)
T 3dx5_A 15 ISFTDIVQF---AYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAI 91 (286)
T ss_dssp CCHHHHHHH---HHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHH---HHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHH
Confidence 467776654 456799998774320 0010112345566666666678776542 111 11 1 2455
Q ss_pred HHHHhCCCeeeccCCC-CH-----HHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHH
Q psy8190 163 RLKKVGLDYYNHNLDT-SP-----KLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQL 231 (348)
Q Consensus 163 ~Lk~aG~~~i~~g~et-~~-----e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l 231 (348)
..++.|+..|.+.... .. +.++. ..+...+..+.+.+.|+.+...-.-+. ..|.++..+.++.+
T Consensus 92 ~A~~lG~~~v~~~~g~~~~~~~~~~~~~~-----~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 92 LANWFKTNKIRTFAGQKGSADFSQQERQE-----YVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp HHHHHTCCEEEECSCSSCGGGSCHHHHHH-----HHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEcCCCCCcccCcHHHHHH-----HHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhc
Confidence 5566699988764332 11 11111 123333445666778998877755454 56777665555443
No 243
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=65.06 E-value=37 Score=30.41 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=17.2
Q ss_pred cccHHHHHHHHHHHHhcCcE-EEE--ecCCCCHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLE-TCL--TLGMLNENQA 161 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~-i~~--~~g~l~~e~l 161 (348)
..+.+++.++++.+.+.|+. +++ +.|..+++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v 182 (325)
T 3eeg_A 147 RADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQY 182 (325)
T ss_dssp GSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHH
Confidence 34556666666666655442 222 3555555433
No 244
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=65.04 E-value=8.6 Score=36.44 Aligned_cols=34 Identities=6% Similarity=0.089 Sum_probs=29.4
Q ss_pred cCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 186 IIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 186 i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
+.+. .+.++..+.++.||+.|+.|..++++.+ +.
T Consensus 73 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 108 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSNDINVYGDVVMNHKMG 108 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEccCcccc
Confidence 5553 3899999999999999999999999998 64
No 245
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=64.80 E-value=46 Score=29.19 Aligned_cols=112 Identities=10% Similarity=0.098 Sum_probs=72.4
Q ss_pred ccCHHHHHHHHHHHHh-CCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHh
Q psy8190 97 ILSIESVITAAQKAKS-DGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKV 167 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~-~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~a 167 (348)
..+.+.+.+.++.+.+ .|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+...++
T Consensus 20 ~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 20 TINEKGLRQIIRHNIDKMKVDGLYVGGSTGENF-MLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATEL 98 (293)
T ss_dssp CBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhhCCCcEEEeCccccchh-hCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhc
Confidence 3678889999999999 99999887664 4433 45666667777766642 477777777544 444 4455567
Q ss_pred CCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 168 GLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 168 G~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
|+|.+.+-.- .|. ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 99 Gadavlv~~P----~y~----~~~~~~l~~~f~~va~a~~lPiilYn~P~~ 141 (293)
T 1f6k_A 99 GYDCLSAVTP----FYY----KFSFPEIKHYYDTIIAETGSNMIVYSIPFL 141 (293)
T ss_dssp TCSEEEEECC----CSS----CCCHHHHHHHHHHHHHHHCCCEEEEECHHH
T ss_pred CCCEEEECCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEEEECccc
Confidence 9998875321 111 1256677777766554 5777766555444
No 246
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=64.75 E-value=60 Score=29.15 Aligned_cols=160 Identities=13% Similarity=0.063 Sum_probs=81.3
Q ss_pred HHHHHHhCCCeeeccCCC-C--HHHHhcc-C--C---CCCHHHH----HHHHHHHHHc-CCeeeEeEeee----cCCCHH
Q psy8190 161 AYRLKKVGLDYYNHNLDT-S--PKLYGDI-I--S---TRDYENR----LNTLKNVRNV-GINICCGGIIG----LSESRD 222 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~et-~--~e~l~~i-~--~---~~~~~~~----~~~i~~~~~~-G~~i~~~~i~G----lget~e 222 (348)
.+..+++|+|.|.+..-. - .+.+.-. + . +.+.+.+ ++.++.++++ ++.+.+-+-.+ -|.+.+
T Consensus 150 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~ 229 (340)
T 3gr7_A 150 ARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAK 229 (340)
T ss_dssp HHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGG
T ss_pred HHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHH
Confidence 455667899999986543 1 3333321 1 1 2355554 5666666653 44333222111 145778
Q ss_pred HHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhC
Q psy8190 223 QRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAG 302 (348)
Q Consensus 223 ~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~G 302 (348)
+..+.++.+.+.+ ++.+.++.-...+ .+....+.. .+.++...|..+. ..|-..+|-. ..+.....+..|
T Consensus 230 ~~~~la~~L~~~G--vd~i~vs~g~~~~-~~~~~~~~~----~~~~~~~ik~~~~-iPVi~~GgI~--s~e~a~~~L~~G 299 (340)
T 3gr7_A 230 DYVPYAKRMKEQG--VDLVDVSSGAIVP-ARMNVYPGY----QVPFAELIRREAD-IPTGAVGLIT--SGWQAEEILQNG 299 (340)
T ss_dssp GHHHHHHHHHHTT--CCEEEEECCCSSC-CCCCCCTTT----THHHHHHHHHHTT-CCEEEESSCC--CHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC--CCEEEEecCCccC-CCCCCCccc----cHHHHHHHHHHcC-CcEEeeCCCC--CHHHHHHHHHCC
Confidence 8888999999998 8888775311111 111111111 2334444444442 2222222211 244556678888
Q ss_pred -cceeeeCCeeccCCCCCchHHHHHHHHcCCCc
Q psy8190 303 -ANSIFYGDKLLTTDNTKTNDDSKLLKKLGINT 334 (348)
Q Consensus 303 -An~~~~~~~~~~~~g~~~~~~~~~i~~~G~~p 334 (348)
|+.++.|--.+ ..++-..++....|..+
T Consensus 300 ~aD~V~iGR~~l----anPdl~~ki~~~l~~~~ 328 (340)
T 3gr7_A 300 RADLVFLGRELL----RNPYWPYAAARELGAKI 328 (340)
T ss_dssp SCSEEEECHHHH----HCTTHHHHHHHHTTCCC
T ss_pred CeeEEEecHHHH----hCchHHHHHHHHCCCCC
Confidence 88887663221 11234456666777543
No 247
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=64.59 E-value=4.6 Score=40.51 Aligned_cols=69 Identities=12% Similarity=0.052 Sum_probs=50.1
Q ss_pred HHHHHHHHhCCCeeeccC--CC-CH-----HHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-SP-----KLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAEL 227 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~~-----e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~ 227 (348)
+.|..|++.|++.|.+.. ++ +. .-|..+.+. .+.++..+.++.||+.|++|..++++.+ +....-+.+.
T Consensus 269 ~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts~~~~~f~~~ 347 (696)
T 4aee_A 269 KHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVKA 347 (696)
T ss_dssp TTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSSEECTTSHHHHHH
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEeccccccCccCHHHHHH
Confidence 678899999999998863 32 11 112234443 3789999999999999999999999999 6554444333
No 248
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=64.46 E-value=39 Score=29.70 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc----CcEEEEec--CCCCHHHHHHHHHhCCCee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI----GLETCLTL--GMLNENQAYRLKKVGLDYY 172 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~----~~~i~~~~--g~l~~e~l~~Lk~aG~~~i 172 (348)
+++.+.+.++.+.+.|+..|+|.+.. ....+..+.++++.+++. .+.++++. |.-....+.. .++|++.+
T Consensus 154 ~~~~~~~~~~~~~~~Ga~~i~l~DT~---G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA-~~aGa~~v 229 (298)
T 2cw6_A 154 SPAKVAEVTKKFYSMGCYEISLGDTI---GVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMA-LQMGVSVV 229 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETT---SCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHH-HHTTCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCC---CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHH-HHhCCCEE
Confidence 56777777777777777777776431 123456666677666652 23344432 2222222333 35677777
Q ss_pred eccCC
Q psy8190 173 NHNLD 177 (348)
Q Consensus 173 ~~g~e 177 (348)
...+-
T Consensus 230 d~tv~ 234 (298)
T 2cw6_A 230 DSSVA 234 (298)
T ss_dssp EEBTT
T ss_pred Eeecc
Confidence 65443
No 249
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=64.40 E-value=41 Score=29.79 Aligned_cols=114 Identities=9% Similarity=-0.027 Sum_probs=74.0
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|++.+++.|. ++.+ ..+.+.-.++++.+.+. .+.+.+..|.. +.+ ..+..+++|
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 109 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFP-FLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVG 109 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGG-GSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchh-hCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcC
Confidence 367888899999999999999988765 3433 45677777888777663 46777777743 444 345566779
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- -.++ +..+.+..++-++.+.+ .++++..+-+-+.
T Consensus 110 adavlv~~P---~y~~---~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~ 153 (307)
T 3s5o_A 110 ADAAMVVTP---CYYR---GRMSSAALIHHYTKVADLSPIPVVLYSVPAN 153 (307)
T ss_dssp CSEEEEECC---CTTG---GGCCHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred CCEEEEcCC---CcCC---CCCCHHHHHHHHHHHHhhcCCCEEEEeCCcc
Confidence 998875321 1111 11356677777766554 5777766555444
No 250
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=64.34 E-value=9.4 Score=37.03 Aligned_cols=63 Identities=16% Similarity=0.251 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCCeeeccC--CC-C-HH-----HHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-S-PK-----LYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESR 221 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~-~e-----~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~ 221 (348)
+.|..|++.|++.|.+.. ++ . .- -|..+.+. .+.++..+.++.||+.|+.|..++++.+ +...
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NHts~~~ 109 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVINHSSDQH 109 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred HHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccccch
Confidence 346667777777776642 22 1 11 12245443 3889999999999999999999999999 6543
No 251
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=64.29 E-value=27 Score=31.65 Aligned_cols=88 Identities=10% Similarity=-0.034 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc--ccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhC-CCeeec
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD--RDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVG-LDYYNH 174 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~--~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG-~~~i~~ 174 (348)
+.++....++.+.+. +..|.+..|...... ....+..++++.+++ .++.+.++.+..+.+.++.+.+.| +|.|.+
T Consensus 228 ~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~i 306 (343)
T 3kru_A 228 NIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVAL 306 (343)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred cHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHH
Confidence 467777777777777 888877544221110 011223455566665 367777777777788888887777 888877
Q ss_pred cCCC--CHHHHhccC
Q psy8190 175 NLDT--SPKLYGDII 187 (348)
Q Consensus 175 g~et--~~e~l~~i~ 187 (348)
|=.. +|.+..++.
T Consensus 307 GR~~lanPdl~~k~~ 321 (343)
T 3kru_A 307 GRELLRNPYWVLHTY 321 (343)
T ss_dssp SHHHHHCTTHHHHTC
T ss_pred HHHHhcCCeEEEEEe
Confidence 6332 355555544
No 252
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=64.22 E-value=43 Score=30.08 Aligned_cols=112 Identities=11% Similarity=0.022 Sum_probs=72.4
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++.+.+. .+++.+..|..+ .+. .+...++|
T Consensus 51 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 51 RVDIEAFSALIARLDAAEVDSVGILGSTGIYM-YLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp CBCHHHHHHHHHHHHHHTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 377888999999999999999887664 3433 45667777777766652 477777777544 443 45556679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. ..+.+..++-++.+.+ .++++..+-+-+.
T Consensus 130 adavlv~~P----~Y~----~~s~~~l~~~f~~VA~a~~lPiilYn~P~~ 171 (332)
T 2r8w_A 130 ADALLLAPV----SYT----PLTQEEAYHHFAAVAGATALPLAIYNNPTT 171 (332)
T ss_dssp CSEEEECCC----CSS----CCCHHHHHHHHHHHHHHCSSCEEEECCHHH
T ss_pred CCEEEECCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 998875331 121 1256677777766554 5677665544444
No 253
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=64.13 E-value=17 Score=32.29 Aligned_cols=71 Identities=11% Similarity=0.163 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.++.++.++.+.+.|..-|++-++ .+ +.+.+.++.+.+... +++.++++....-..+.|.+.|+.+++++.
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~--~~---~~~~~~~i~~~~~~~-~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~ 239 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSK--KA---DPSDIEAFMKAWNNQ-GPVVIVPTKYYKTPTDHFRDMGVSMVIWAN 239 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCC--SS---SSHHHHHHHHHHTTC-SCEEECCSTTTTSCHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCC--CC---CHHHHHHHHHHcCCC-CCEEEeCCCCCCCCHHHHHHcCCcEEEECh
Confidence 588888888888888888877543 11 235667777776531 344445432111127788888999888766
No 254
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=64.10 E-value=78 Score=28.07 Aligned_cols=112 Identities=10% Similarity=0.026 Sum_probs=72.7
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+ ..+...++|
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~-~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~G 117 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVSPVGTTGESP-TLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAG 117 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEECSSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCcc-ccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 367889999999999999999887664 3433 45666667777766542 46777777754 444 445566779
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. .-+.+..++-++.+.+ .++++..+-+-+.
T Consensus 118 adavlv~~P----~y~----~~~~~~l~~~f~~va~a~~lPiilYn~P~~ 159 (315)
T 3si9_A 118 ADAVLVVTP----YYN----RPNQRGLYTHFSSIAKAISIPIIIYNIPSR 159 (315)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred CCEEEECCC----CCC----CCCHHHHHHHHHHHHHcCCCCEEEEeCchh
Confidence 999875321 111 1255667777766655 5777766655444
No 255
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=63.95 E-value=74 Score=27.72 Aligned_cols=202 Identities=16% Similarity=0.137 Sum_probs=107.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccC--CCCC---cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAW--RELK---DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~--~~~~---~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
+.+..++.++.+++.|.+-+.++.-- +++. ....+.+..+.+..++.|+.+.++ .++.+.++.+.+. ++.+.
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te--~~d~~~~~~l~~~-vd~~k 126 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTE--VLDPRHVETVSRY-ADMLQ 126 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEE--CCCGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEe--cCCHHHHHHHHHh-CCeEE
Confidence 67888888888888898877665431 1110 012455555555555678888654 4667778888888 88888
Q ss_pred ccCCC--CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCC
Q psy8190 174 HNLDT--SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKG 251 (348)
Q Consensus 174 ~g~et--~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~g 251 (348)
++--+ +..+ ++.+.+.|.+|. +=-|+.-|.+++...++.+++-+ ...+.+ -..|
T Consensus 127 Igs~~~~n~~l----------------l~~~a~~~kPV~--lk~G~~~t~~ei~~Ave~i~~~G--n~~i~L----~~Rg 182 (276)
T 1vs1_A 127 IGARNMQNFPL----------------LREVGRSGKPVL--LKRGFGNTVEELLAAAEYILLEG--NWQVVL----VERG 182 (276)
T ss_dssp ECGGGTTCHHH----------------HHHHHHHTCCEE--EECCTTCCHHHHHHHHHHHHHTT--CCCEEE----EECC
T ss_pred ECcccccCHHH----------------HHHHHccCCeEE--EcCCCCCCHHHHHHHHHHHHHcC--CCeEEE----EeCC
Confidence 76433 2223 333334555542 22344448899999999888876 333221 1123
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHHHHCCCCceeccc---cccccchhhHHHHHHhCcceeeeCCeecc----CCCCC---c
Q psy8190 252 TPLY-GSSILDPLEFIRTIAVARITMPTSRIRMSA---GRKEMGETTQAFCFLAGANSIFYGDKLLT----TDNTK---T 320 (348)
Q Consensus 252 T~l~-~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~---g~~~l~~~~~~~~l~~GAn~~~~~~~~~~----~~g~~---~ 320 (348)
+.-+ ..+..+ -.+..+...+..+.-..+-.+. |...+.......++..||+++|.+.++.. .+|+. +
T Consensus 183 ~~~yp~y~~~~--vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p 260 (276)
T 1vs1_A 183 IRTFEPSTRFT--LDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTP 260 (276)
T ss_dssp BCCSCCSSSSB--CBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCH
T ss_pred cCCCCCcCcch--hCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCCcccCCCchhcCCCH
Confidence 3211 111111 1223333344332111112221 11112245677788999999987654411 13332 3
Q ss_pred hHHHHHHHH
Q psy8190 321 NDDSKLLKK 329 (348)
Q Consensus 321 ~~~~~~i~~ 329 (348)
++..+++++
T Consensus 261 ~~~~~lv~~ 269 (276)
T 1vs1_A 261 GEFARLMGE 269 (276)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 566666554
No 256
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=63.86 E-value=8.1 Score=37.67 Aligned_cols=64 Identities=17% Similarity=0.228 Sum_probs=44.0
Q ss_pred HHHHHHHHhCCCeeeccC--CC-C-HHH-----HhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-S-PKL-----YGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRD 222 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~-~e~-----l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e 222 (348)
+.|..|++.|++.|.+.. ++ . ..- |..+.+. .+.++..+.++.||+.|+.|..++++.+ +....
T Consensus 49 ~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~s~~~~ 123 (570)
T 1m53_A 49 EKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVINHTSDQHP 123 (570)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSH
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccccccH
Confidence 456677777777776642 22 1 111 1234432 3889999999999999999999999999 65443
No 257
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=63.74 E-value=8.6 Score=32.63 Aligned_cols=69 Identities=14% Similarity=0.239 Sum_probs=46.5
Q ss_pred HHHHHHHHHhCCCCEEEEeccCC--CCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHh---CCCeeecc
Q psy8190 103 VITAAQKAKSDGATRFCMGAAWR--ELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKV---GLDYYNHN 175 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~~--~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~a---G~~~i~~g 175 (348)
..+.++.+.+.|+..|.+.+... .....+++ .++.+++ .++++.++.|..+.+.+..+.++ |++.+-+|
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~----~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG 225 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLGGPNLD----LLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVG 225 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHH----HHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccCCCCHH----HHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEc
Confidence 34445566677999988766311 11123444 4444444 47888888888888999999998 99988765
No 258
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=63.59 E-value=53 Score=28.23 Aligned_cols=128 Identities=13% Similarity=0.231 Sum_probs=70.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccC-CCCCcccHHHHHHHHHHHHhcCc-EEEEecCC--CCHH----HHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAW-RELKDRDLDNIENMICEVKKIGL-ETCLTLGM--LNEN----QAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~-~~~~~~~~~~~~~l~~~i~~~~~-~i~~~~g~--l~~e----~l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.++|+. ++.+|.. +. ......+.+.++..++.|+ .+.+|.|. ++.+ .++..++.|+
T Consensus 52 ~~~~~l~eki~l~~~~gV~-v~~GGTl~E~--~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~ 128 (251)
T 1qwg_A 52 IDRDVVKEKINYYKDWGIK-VYPGGTLFEY--AYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGF 128 (251)
T ss_dssp SCHHHHHHHHHHHHTTTCE-EEECHHHHHH--HHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCe-EECCcHHHHH--HHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCC
Confidence 4455555666667777763 4454421 10 0111245566666676665 46677774 4443 4556667788
Q ss_pred Ceee-ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCe-ee--E---e---Eeeec-CCCHHHHHHHHHHHHhcC
Q psy8190 170 DYYN-HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGIN-IC--C---G---GIIGL-SESRDQRAELIFQLANLN 235 (348)
Q Consensus 170 ~~i~-~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~-i~--~---~---~i~Gl-get~e~~~~~l~~l~~l~ 235 (348)
.-++ +|.. +++.- ...+.+++++.++..-++|-. |- + + .||.- |+-..+.++.+ +.+++
T Consensus 129 ~v~~EvG~k-~~~~~----~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i--~~~l~ 198 (251)
T 1qwg_A 129 MVLTEVGKK-MPDKD----KQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVL--AKNVD 198 (251)
T ss_dssp EEEEEECCS-SHHHH----TTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHH--HTTSC
T ss_pred EEeeecccc-CCccc----CCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcHHHHHHH--HHhCC
Confidence 7655 1222 22111 245899999999999999962 22 2 2 34444 55566655443 33444
No 259
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=63.58 E-value=7.9 Score=38.00 Aligned_cols=62 Identities=8% Similarity=0.059 Sum_probs=44.0
Q ss_pred HHHHHHHHhCCCeeeccC--CCC-H---------HHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCC
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DTS-P---------KLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SES 220 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et~-~---------e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get 220 (348)
+.|..|++.|++.|.+.. ++. . .-|..+.+. .+.++..+.++.||+.|++|..++++.+ +..
T Consensus 152 ~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~ 227 (601)
T 3edf_A 152 DHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKH 227 (601)
T ss_dssp HTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCcccCCc
Confidence 556777777777777642 211 0 112245443 3889999999999999999999999998 543
No 260
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=63.48 E-value=35 Score=30.38 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=72.4
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+ ..+...++|
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~G 118 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVAVGTTGESA-TLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGG 118 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSGGGTGG-GCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 377889999999999999999888664 4433 45666667777666542 46777777754 344 445566779
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. .-+.+..++-++.+.+ .++++..+-+-+.
T Consensus 119 adavlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~ 160 (314)
T 3qze_A 119 ADACLLVTP----YYN----KPTQEGMYQHFRHIAEAVAIPQILYNVPGR 160 (314)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHHHSCSCEEEEECHHH
T ss_pred CCEEEEcCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 998875321 111 1255667777766654 5777766655444
No 261
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=63.17 E-value=27 Score=29.44 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCC--CCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHh-----C-CC
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWR--ELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKV-----G-LD 170 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~--~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~a-----G-~~ 170 (348)
+..++. +.+.+.|+..|++.+-.. .....+++.+.++.+. .++++.++.|..+.+.++.++++ | ++
T Consensus 145 ~~~e~~---~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~---~~iPvia~GGI~~~~d~~~~~~~~~~~~G~ad 218 (241)
T 1qo2_A 145 DPVSLL---KRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIE---AEVKVLAAGGISSENSLKTAQKVHTETNGLLK 218 (241)
T ss_dssp CHHHHH---HHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHH---HTCEEEEESSCCSHHHHHHHHHHHHHTTTSEE
T ss_pred CHHHHH---HHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHhcccccCCeEe
Confidence 455554 344568999988865210 0112244444444333 36889889999999999999998 9 99
Q ss_pred eeecc
Q psy8190 171 YYNHN 175 (348)
Q Consensus 171 ~i~~g 175 (348)
.+-+|
T Consensus 219 gv~vg 223 (241)
T 1qo2_A 219 GVIVG 223 (241)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 88765
No 262
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=63.15 E-value=46 Score=29.24 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=36.9
Q ss_pred cCHHHHHHHHHH----HHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcE-EEE--ecCCCCHHHHHHHH
Q psy8190 98 LSIESVITAAQK----AKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE-TCL--TLGMLNENQAYRLK 165 (348)
Q Consensus 98 ~~~eei~~~~~~----~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~-i~~--~~g~l~~e~l~~Lk 165 (348)
++.+|+++.++. +++.|.. +.++.. ..+..+.+++.++++.+.+.|+. +++ +.|..+++.+..+-
T Consensus 114 ~s~~e~l~~~~~~v~~a~~~g~~-v~~~~~--d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv 185 (293)
T 3ewb_X 114 MSRAEVLASIKHHISYARQKFDV-VQFSPE--DATRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLF 185 (293)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSC-EEEEEE--TGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCCE-EEEEec--cCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHH
Confidence 566666555443 4455643 333221 12345678888888888877653 333 47777776554443
No 263
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=63.03 E-value=57 Score=29.70 Aligned_cols=105 Identities=14% Similarity=0.097 Sum_probs=66.1
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++...+. .+.+.+..|.. +.+. .+...++|+
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~-~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Ga 155 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQ-LMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGM 155 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccccChh-hCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 67888888899999999999888664 3433 45666666777665542 47777777754 4444 444556799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCG 212 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~ 212 (348)
|.+.+-. | .|. ..+.+..++-++.+.++ .++..+
T Consensus 156 davlvv~---P-yY~----k~sq~gl~~hf~~IA~a-~PiilY 189 (360)
T 4dpp_A 156 HAALHIN---P-YYG----KTSIEGLIAHFQSVLHM-GPTIIY 189 (360)
T ss_dssp SEEEEEC---C-CSS----CCCHHHHHHHHHTTGGG-SCEEEE
T ss_pred CEEEEcC---C-CCC----CCCHHHHHHHHHHHHHh-CCEEEE
Confidence 9887532 1 121 12556666666666555 454433
No 264
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=62.89 E-value=42 Score=29.38 Aligned_cols=110 Identities=11% Similarity=0.043 Sum_probs=66.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+..+++|+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Ga 97 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEAT-TMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGV 97 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCC
Confidence 67888889999999999999887664 4433 45666667777766542 466777777544 443 445566799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeee
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIG 216 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~G 216 (348)
|.+.+-.-. |. ..+.+...+-++.+.+ .++++..+-+-+
T Consensus 98 davlv~~P~----y~----~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3a5f_A 98 DGLLVITPY----YN----KTTQKGLVKHFKAVSDAVSTPIIIYNVPG 137 (291)
T ss_dssp SEEEEECCC----SS----CCCHHHHHHHC-CTGGGCCSCEEEEECHH
T ss_pred CEEEEcCCC----CC----CCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 988753211 11 1144555555554433 355555444433
No 265
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=62.79 E-value=68 Score=28.74 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=38.0
Q ss_pred HHHHHHhCCCCEEEEeccCC-CCCcc-----cHHHHHHHHHHHHhc----CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 106 AAQKAKSDGATRFCMGAAWR-ELKDR-----DLDNIENMICEVKKI----GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~-~~~~~-----~~~~~~~l~~~i~~~----~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.++...+.|+..|.+...+. ..++. -.+++.++++.+++. ++.+....+.. ...+..|.+.|++.+++.
T Consensus 192 ~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~-~~~l~~l~~~g~d~i~~d 270 (354)
T 3cyv_A 192 YLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG-GQWLEAMAETGCDALGLD 270 (354)
T ss_dssp HHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT-TTTHHHHHTTSCSEEECC
T ss_pred HHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH-HHHHHHHHhcCCCEEEeC
Confidence 33444567998887654321 11111 123444555555543 24333333333 457889999999999863
No 266
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=62.78 E-value=14 Score=34.50 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=29.1
Q ss_pred cCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 186 IIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 186 i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
+.+. .+.++..+.++.+|+.|+.|..++++.+ +.
T Consensus 79 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 114 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAYGIKVIADVVINHRAG 114 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECcccccC
Confidence 4443 3899999999999999999999999998 54
No 267
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=62.74 E-value=44 Score=29.45 Aligned_cols=111 Identities=12% Similarity=0.038 Sum_probs=72.5
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc----CcEEEEecCCC-CHHH---HHHHHHhC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI----GLETCLTLGML-NENQ---AYRLKKVG 168 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~----~~~i~~~~g~l-~~e~---l~~Lk~aG 168 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+. .+...++|
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~G 103 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTTGESA-TLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHG 103 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 67888999999999999999888664 3433 45666667777766542 47787777754 4443 44555679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. .-+.+...+-++.+.+ .++++..+-+-+.
T Consensus 104 adavlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~ 145 (301)
T 3m5v_A 104 ADGILSVAP----YYN----KPTQQGLYEHYKAIAQSVDIPVLLYNVPGR 145 (301)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred CCEEEEcCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEEEeCchh
Confidence 998875331 111 1256777777776655 5777765555444
No 268
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=62.65 E-value=19 Score=32.87 Aligned_cols=28 Identities=21% Similarity=0.239 Sum_probs=16.1
Q ss_pred CCCCHHHHHHhhcCChHHHHHHHHHHHHhhcC
Q psy8190 27 LIWKLDEVINLFNLPFNDLLFRAQKVHRKYFD 58 (348)
Q Consensus 27 ~~ls~~e~~~Ll~~~~~~l~~~A~~~~~~~~~ 58 (348)
+.+|.+|+..+. .+...+|....+.-|+
T Consensus 149 r~mt~~eI~~ii----~~f~~AA~~A~~aGfD 176 (361)
T 3gka_A 149 RALELDEIPGVV----AAFRRGAENARAAGFD 176 (361)
T ss_dssp EECCGGGHHHHH----HHHHHHHHHHHHTTCS
T ss_pred ccCCHHHHHHHH----HHHHHHHHHHHHcCCC
Confidence 346667766653 3445556666555664
No 269
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=62.53 E-value=36 Score=30.20 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=70.3
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++...+. .+++.+..|.. +.+ ..+...++|
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 103 (309)
T 3fkr_A 25 DLDLASQKRAVDFMIDAGSDGLCILANFSEQF-AITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLG 103 (309)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCcc-cCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcC
Confidence 377889999999999999999888664 4433 45666667777766552 46777777754 444 345556679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeE
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGG 213 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~ 213 (348)
+|.+.+-. | .|.... ..+.+...+-++.+.+ .++++..+-
T Consensus 104 adavlv~~---P-yy~~~~-~~s~~~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 104 AAMVMAMP---P-YHGATF-RVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp CSEEEECC---S-CBTTTB-CCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEEcC---C-CCccCC-CCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99887532 1 221101 1256677777766655 577765443
No 270
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=62.24 E-value=38 Score=30.17 Aligned_cols=112 Identities=11% Similarity=0.075 Sum_probs=71.6
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+ ..+...++|
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 106 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNAEAF-LLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAG 106 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGGTGG-GSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 367889999999999999999887764 4433 45667667777766552 46777777754 344 445556779
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEee
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGII 215 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~ 215 (348)
+|.+.+-. |-.|. ++.+.+...+-++.+.+ .++++..+-+-
T Consensus 107 adavlv~~---P~y~~---kp~~~~~l~~~f~~ia~a~~lPiilYn~P 148 (318)
T 3qfe_A 107 ANYVLVLP---PAYFG---KATTPPVIKSFFDDVSCQSPLPVVIYNFP 148 (318)
T ss_dssp CSEEEECC---CCC------CCCHHHHHHHHHHHHHHCSSCEEEEECC
T ss_pred CCEEEEeC---CcccC---CCCCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 99887532 11221 12356677777766655 57776655443
No 271
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=62.20 E-value=30 Score=31.51 Aligned_cols=71 Identities=11% Similarity=0.011 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCC-CcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhC-CCeeecc
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWREL-KDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVG-LDYYNHN 175 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~-~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG-~~~i~~g 175 (348)
.++..+.++.+.+.|+..|.+.++.... ...+. ++++.+++ .++.+.++.|. +.+.++.+.+.| +|.|.++
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~----~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV----SFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH----HHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH----HHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceehhc
Confidence 3444555555555566555555431100 00111 23344443 24444444443 555555555555 5555543
No 272
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=61.99 E-value=1.2e+02 Score=29.30 Aligned_cols=135 Identities=12% Similarity=0.113 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHH----hcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK----KIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~----~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
.+.+.++.+.+.|++.|.+---. . +...+.++++.++ +.+..+.+|- .++...++|.+.|+++.+
T Consensus 26 ~l~~~ve~al~~Gv~~vQlR~K~--~---~~~~~~~~a~~l~~l~~~~~v~liIND------~~dlA~~~gAdGVHLgq~ 94 (540)
T 3nl6_A 26 TLYGQVEAGLQNGVTLVQIREKD--A---DTKFFIEEALQIKELCHAHNVPLIIND------RIDVAMAIGADGIHVGQD 94 (540)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSS--S---CTTHHHHHHHHHHHHHHHTTCCEEECS------CSHHHHHTTCSEEEECTT
T ss_pred hHHHHHHHHHHCCCCEEEEecCC--C---CHHHHHHHHHHHHHHHHhcCCEEEEeC------cHHHHHHcCCCEEEEChh
Confidence 35566667778899998885431 1 2233444444443 3577776653 356677889999998875
Q ss_pred C-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCC-CCeeecccccccCCCCC
Q psy8190 178 T-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPY-PESVPINNLVQIKGTPL 254 (348)
Q Consensus 178 t-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~-~~~i~~~~l~P~~gT~l 254 (348)
. .... .+... | .+.++|. -.|.++.... .+.+.. +|.+.+.++.|.+.-|-
T Consensus 95 dl~~~~----------------ar~~l--g----~~~iiG~S~ht~eea~~A----~~~G~~~aDYv~~Gpvf~T~tK~~ 148 (540)
T 3nl6_A 95 DMPIPM----------------IRKLV--G----PDMVIGWSVGFPEEVDEL----SKMGPDMVDYIGVGTLFPTLTKKN 148 (540)
T ss_dssp SSCHHH----------------HHHHH--C----TTSEEEEEECSHHHHHHH----HHTCC--CCEEEESCCSCCCCCC-
T ss_pred hcCHHH----------------HHHHh--C----CCCEEEEECCCHHHHHHH----HHcCCCCCCEEEEcCCCCCCCCCC
Confidence 4 2111 11111 1 2456777 6687775443 334311 58899988887653332
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q psy8190 255 YGSSILDPLEFIRTIAVAR 273 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~a~~R 273 (348)
...++..++.+.++....+
T Consensus 149 ~~~~~~G~~~l~~i~~~~~ 167 (540)
T 3nl6_A 149 PKKAPMGTAGAIRVLDALE 167 (540)
T ss_dssp ---CCCHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHH
Confidence 1113344444444444443
No 273
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=61.48 E-value=9.8 Score=37.38 Aligned_cols=34 Identities=9% Similarity=0.151 Sum_probs=29.0
Q ss_pred cCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 186 IIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 186 i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
+.+. .+.++..+.++.||+.|++|..++++.+ +.
T Consensus 201 idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NH~~~ 236 (599)
T 3bc9_A 201 VRTKYGTKGELENAIDALHNNDIKVYFDAVLNHRMG 236 (599)
T ss_dssp SSBTTBCHHHHHHHHHHHHHTTCEEEEEECCSEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEECcCCCCC
Confidence 4443 3889999999999999999999999998 53
No 274
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=61.40 E-value=5.6 Score=37.74 Aligned_cols=33 Identities=3% Similarity=0.035 Sum_probs=28.6
Q ss_pred ccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec
Q psy8190 185 DIIST-RDYENRLNTLKNVRNVGINICCGGIIGL 217 (348)
Q Consensus 185 ~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl 217 (348)
.+.+. .+.++..+.++.+|+.|+.|-.++++.+
T Consensus 89 ~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH 122 (478)
T 2guy_A 89 SLNENYGTADDLKALSSALHERGMYLMVDVVANH 122 (478)
T ss_dssp EECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred ccCccCCCHHHHHHHHHHHHHCCCEEEEEECccc
Confidence 45543 3889999999999999999999999998
No 275
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=61.26 E-value=21 Score=32.57 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=17.3
Q ss_pred CCCCHHHHHHhhcCChHHHHHHHHHHHHhhcC
Q psy8190 27 LIWKLDEVINLFNLPFNDLLFRAQKVHRKYFD 58 (348)
Q Consensus 27 ~~ls~~e~~~Ll~~~~~~l~~~A~~~~~~~~~ 58 (348)
+.+|.+|+..+. .+...+|....+.-|+
T Consensus 141 r~mt~~eI~~ii----~~f~~AA~~a~~aGfD 168 (362)
T 4ab4_A 141 RALETEEINDIV----EAYRSGAENAKAAGFD 168 (362)
T ss_dssp EECCHHHHHHHH----HHHHHHHHHHHHTTCS
T ss_pred CcCCHHHHHHHH----HHHHHHHHHHHHcCCC
Confidence 457888887763 3445556666555664
No 276
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=61.23 E-value=7.2 Score=36.62 Aligned_cols=60 Identities=13% Similarity=0.119 Sum_probs=42.0
Q ss_pred HHHHHHHhCCCeeeccC--CC-CHH-------HHh-----ccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 160 QAYRLKKVGLDYYNHNL--DT-SPK-------LYG-----DIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~--et-~~e-------~l~-----~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
.+..|++.|++.|.+.. ++ +.. -|. .+.+. .+.++..+.++.+|+.|+.|-.++++.+ +.
T Consensus 35 ~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~NH~~~ 111 (449)
T 3dhu_A 35 DLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYNHTSP 111 (449)
T ss_dssp THHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEECT
T ss_pred hHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccCcCcC
Confidence 46677777777777652 22 111 022 33332 3789999999999999999999999998 54
No 277
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=61.06 E-value=9.7 Score=33.63 Aligned_cols=64 Identities=13% Similarity=0.120 Sum_probs=46.1
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
++++++.+.|++.|.+.- .+.+.+.++++.++.. .+.+.++. -++.+.+..+.+.|+|.+++|-
T Consensus 204 eea~eA~~aGaD~I~LDn-------~~~e~l~~av~~l~~~~~~v~ieASG-GIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 204 EDALRAVEAGADIVMLDN-------LSPEEVKDISRRIKDINPNVIVEVSG-GITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHHHHHHTTCSEEEEES-------CCHHHHHHHHHHHHHHCTTSEEEEEE-CCCTTTGGGGCCTTCCEEEEGG
T ss_pred HHHHHHHHcCCCEEEECC-------CCHHHHHHHHHHhhccCCCceEEEEC-CCCHHHHHHHHHcCCCEEEEeH
Confidence 444455667888876632 2457788888888752 45666554 4788999999999999999874
No 278
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=60.92 E-value=65 Score=28.05 Aligned_cols=220 Identities=9% Similarity=0.022 Sum_probs=106.1
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcC-cEEE---EecCCC-CHHHHHHHHHhCCCe
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIG-LETC---LTLGML-NENQAYRLKKVGLDY 171 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~-~~i~---~~~g~l-~~e~l~~Lk~aG~~~ 171 (348)
..+++++++.+ .+.|+...++++.. ....+.+++.+++ ++.. +.-. +.+..- ..+.++.+.+.|+..
T Consensus 33 ~~~~~~ll~~~---~~~GV~~~V~v~~~--~~~~~n~~l~~la---~~~p~~~g~vg~v~~~~~~~~~~L~~l~~~gv~G 104 (303)
T 4do7_A 33 DYLPDALHPLM---HAQALGASIAVQAR--AGRDETAFLLELA---CDEARIAAVVGWEDLRAPQLAERVAEWRGTKLRG 104 (303)
T ss_dssp CBCHHHHHHHH---HHTTCCEEEEECCS--SSHHHHHHHHHHH---TTCTTEEEEEECCCTTCTTHHHHHTTCCSSCEEE
T ss_pred CCCHHHHHHHH---HhcCCcEEEEEccC--CcHHHHHHHHHHH---HhCCCeEEEEEEeCCCCchHHHHHHHHhhcCceE
Confidence 46788888754 46799987776542 2223344555543 2322 2111 222211 245555555557766
Q ss_pred eeccCCC-C-HH-HHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccc
Q psy8190 172 YNHNLDT-S-PK-LYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ 248 (348)
Q Consensus 172 i~~g~et-~-~e-~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P 248 (348)
|-+.... . +. .+ .-+.+...++.+.+.|+.+..+.- . .++.+....++++.+ ...| + -
T Consensus 105 ir~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~glpv~ih~~---~---~~l~~l~~ll~~~P~-l~iV-i----~ 165 (303)
T 4do7_A 105 FRHQLQDEADVRAFV-------DDADFARGVAWLQANDYVYDVLVF---E---RQLPDVQAFCARHDA-HWLV-L----D 165 (303)
T ss_dssp EECCGGGSSCHHHHH-------HCHHHHHHHHHHHHTTCEEEECCC---G---GGHHHHHHHHHHCCS-SCEE-E----G
T ss_pred EEecCcCCCCccccc-------cCHHHHHHHHHHHHCCCeEEEecC---H---HHHHHHHHHHHHCCC-CCEE-E----e
Confidence 6654322 1 11 11 124667888999999998776631 1 223444555666631 1121 1 1
Q ss_pred cCCCCCC---CCCCCCHHHHH-HHHHHHHHHCCCCceeccccccccc--------------hhhHHHHHHhCcceeeeCC
Q psy8190 249 IKGTPLY---GSSILDPLEFI-RTIAVARITMPTSRIRMSAGRKEMG--------------ETTQAFCFLAGANSIFYGD 310 (348)
Q Consensus 249 ~~gT~l~---~~~~~~~~~~~-~~~a~~R~~lp~~~i~~s~g~~~l~--------------~~~~~~~l~~GAn~~~~~~ 310 (348)
+-|.|.. +.......... .+..++ -.||..+.+|+-..... +......-..|++.++.|.
T Consensus 166 H~G~p~~~~~~~~~~~~~~w~~~l~~la--~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgS 243 (303)
T 4do7_A 166 HAGKPALAEFDRDDTALARWRAALRELA--ALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGS 243 (303)
T ss_dssp GGGCCCGGGCC---CHHHHHHHHHHHHH--TSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECC
T ss_pred CCCCCCccccccccchHHHHHHHHHHHH--hCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeC
Confidence 1222211 11001111111 233333 26887777764211110 1122233346899997775
Q ss_pred ee-ccCCCCCchHHHHHHHH---cCCCchhhhhHHhhhh
Q psy8190 311 KL-LTTDNTKTNDDSKLLKK---LGINTRNIKIKMKNNI 345 (348)
Q Consensus 311 ~~-~~~~g~~~~~~~~~i~~---~G~~p~~~~~~~~~~~ 345 (348)
.+ ......+..+..+.+++ .|+.+.++..-+-.|.
T Consensus 244 D~P~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~Na 282 (303)
T 4do7_A 244 DWPVCLLAASYDEVASLVERWAESRLSAAERSALWGGTA 282 (303)
T ss_dssp CBTGGGGTCCHHHHHHHHHHHHHHHCCHHHHHHHTTHHH
T ss_pred CCCCCcCcCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 43 22223345566677766 5777776655555553
No 279
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=60.89 E-value=8.8 Score=37.14 Aligned_cols=64 Identities=19% Similarity=0.187 Sum_probs=42.9
Q ss_pred HHHHHHHHhCCCeeeccC--CC-C-HHH-----HhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-S-PKL-----YGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRD 222 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~-~e~-----l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e 222 (348)
+.+..|++.|++.|.+.. ++ . +-- |..+.+. .+.++..+.++.+|+.|+.|..++++.+ +....
T Consensus 35 ~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~s~~~~ 109 (543)
T 2zic_A 35 SKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTSDEHA 109 (543)
T ss_dssp HTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSH
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCcccccch
Confidence 345666666776666542 22 1 111 2234432 3789999999999999999999999999 65433
No 280
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=60.85 E-value=82 Score=27.21 Aligned_cols=132 Identities=15% Similarity=0.035 Sum_probs=76.9
Q ss_pred ccCHHHHHHHHHHHHhC--CCCEE--EEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCH-HHHHHHHHhCCCe
Q psy8190 97 ILSIESVITAAQKAKSD--GATRF--CMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNE-NQAYRLKKVGLDY 171 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~--G~~~i--~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~-e~l~~Lk~aG~~~ 171 (348)
.++.+++...++...+. ++..+ ++++.. ..+.+.+..+++.+++.++-+-=+ ++... -..+.-++.|+-.
T Consensus 106 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~----T~~~~~M~~vm~~L~~~gL~FlDS-~Ts~~S~a~~~A~~~gvp~ 180 (261)
T 2qv5_A 106 GDPAKVNIDRLHRSMAKITNYTGVMNYLGGRF----LAEQSALEPVMRDIGKRGLLFLDD-GSSAQSLSGGIAKAISAPQ 180 (261)
T ss_dssp TSCHHHHHHHHHHHHTTCCCCSEEEEEECTTG----GGCHHHHHHHHHHHHHTTCEEEEC-SCCTTCCHHHHHHHHTCCE
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccch----hcCHHHHHHHHHHHHHCCCEEEcC-CCCcccHHHHHHHHcCCCe
Confidence 37899999998887764 45665 444432 235567888888888887665422 22211 2234456678877
Q ss_pred ee--ccCCCCHHHHhccCCCCCH----HHHHHHHHHHHHcCCeeeEeEeeec--CCCHHHHHHHHHHHHhcCCCCCeeec
Q psy8190 172 YN--HNLDTSPKLYGDIISTRDY----ENRLNTLKNVRNVGINICCGGIIGL--SESRDQRAELIFQLANLNPYPESVPI 243 (348)
Q Consensus 172 i~--~g~et~~e~l~~i~~~~~~----~~~~~~i~~~~~~G~~i~~~~i~Gl--get~e~~~~~l~~l~~l~~~~~~i~~ 243 (348)
+. +-++. ..+. .+..++...+++.|.-| .+|+ .+|.+-+.+.+..+++-+ +..+++
T Consensus 181 ~~rdvFLD~----------~~~~~~I~~qL~~a~~~Ar~~G~AI----aIGhp~p~Ti~aL~~~~~~l~~~g--i~LVpv 244 (261)
T 2qv5_A 181 GFADVLLDG----------EVTEASILRKLDDLERIARRNGQAI----GVASAFDESIAAISKWSREAGGRG--IEIVGV 244 (261)
T ss_dssp EECSEETTS----------SCSHHHHHHHHHHHHHHHHHHSEEE----EEEECCHHHHHHHHHHHHHGGGGT--EEECCH
T ss_pred EEeeeecCC----------CCCHHHHHHHHHHHHHHHHhcCcEE----EEeCCCHHHHHHHHHHhhhhhhCC--eEEEEH
Confidence 66 22332 1222 34556677788888654 4555 345555555555555444 667777
Q ss_pred cccccc
Q psy8190 244 NNLVQI 249 (348)
Q Consensus 244 ~~l~P~ 249 (348)
+.+...
T Consensus 245 S~ll~~ 250 (261)
T 2qv5_A 245 SALVSG 250 (261)
T ss_dssp HHHC--
T ss_pred HHHhhc
Confidence 766643
No 281
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=60.85 E-value=45 Score=30.08 Aligned_cols=110 Identities=9% Similarity=-0.005 Sum_probs=68.0
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++.+.+. .+.+.+..|..+ .+. .+...++|
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 126 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFS-QLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAG 126 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 367888999999999999999887664 3433 45666677777766542 466777777443 444 44555679
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEee
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGII 215 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~ 215 (348)
+|.+.+-.- .|. ..+.+..++-++.+.+ .++++..+-+-
T Consensus 127 adavlv~~P----~Y~----~~s~~~l~~~f~~VA~a~~lPiilYn~P 166 (343)
T 2v9d_A 127 ADGIVVINP----YYW----KVSEANLIRYFEQVADSVTLPVMLYNFP 166 (343)
T ss_dssp CSEEEEECC----SSS----CCCHHHHHHHHHHHHHTCSSCEEEEECH
T ss_pred CCEEEECCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 998875321 111 1145566666655444 35555544333
No 282
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=60.61 E-value=46 Score=29.45 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=70.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+...++|+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESP-TVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGG-GCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchh-hCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCC
Confidence 67888889999999999999887664 4433 45666667777666542 466777777544 444 445556799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
|.+.+-.- .|. ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 109 davlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~ 149 (306)
T 1o5k_A 109 NGVLVVTP----YYN----KPTQEGLYQHYKYISERTDLGIVVYNVPGR 149 (306)
T ss_dssp SEEEEECC----CSS----CCCHHHHHHHHHHHHTTCSSCEEEEECHHH
T ss_pred CEEEECCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEEEeCccc
Confidence 98875321 111 1256777777766555 4677665555444
No 283
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.58 E-value=58 Score=28.89 Aligned_cols=124 Identities=11% Similarity=-0.022 Sum_probs=79.3
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCC-CHH---HHHHHHHhCC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI--GLETCLTLGML-NEN---QAYRLKKVGL 169 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l-~~e---~l~~Lk~aG~ 169 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++.+.+. .+++.+..|.. +.+ ..+...++|+
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 25 KIDDVSIDRLTDFYAEVGCEGVTVLGILGEAP-KLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESTGGGTGG-GSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEeCccCcChh-hCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 367889999999999999999888664 4433 45666667777666543 57777777754 344 4455666799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cC--CeeeEeEeeec-CCCHHHHHHHHHHHH
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VG--INICCGGIIGL-SESRDQRAELIFQLA 232 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G--~~i~~~~i~Gl-get~e~~~~~l~~l~ 232 (348)
|.+.+-. |- +. .+.+..++-++.+.+ .+ +++..+-+-+. |-+.. .+++..|.
T Consensus 104 davlv~~---P~-~~-----~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~--~~~~~~La 159 (313)
T 3dz1_A 104 AGVMIAP---PP-SL-----RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMT--PKVIRQIV 159 (313)
T ss_dssp SEEEECC---CT-TC-----CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCC--HHHHHHHH
T ss_pred CEEEECC---CC-CC-----CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCC--HHHHHHHH
Confidence 9987522 21 21 266777777777655 46 88776655554 43332 23444444
No 284
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.54 E-value=64 Score=28.39 Aligned_cols=127 Identities=11% Similarity=0.006 Sum_probs=77.4
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCC-CCHH---HHHHHHHhC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGM-LNEN---QAYRLKKVG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~-l~~e---~l~~Lk~aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|. -+.+ ..+...++|
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGLTPLGSTGEFA-YLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGG-GCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCcc-ccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 367889999999999999999876654 4433 45666667777666552 3566655553 3444 445566779
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec-CCCHHHHHHHHHHHHhc
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL-SESRDQRAELIFQLANL 234 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l 234 (348)
+|.+.+-.- .|. ..+.+..++-++.+.+ .++++..+-+-+. |-+.. .+++..|.+.
T Consensus 100 adavlv~~P----~y~----~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~--~~~~~~La~~ 157 (300)
T 3eb2_A 100 ADGILAILE----AYF----PLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLT--LDVIARLAEH 157 (300)
T ss_dssp CSEEEEEEC----CSS----CCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCC--HHHHHHHHTS
T ss_pred CCEEEEcCC----CCC----CCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCC--HHHHHHHHcC
Confidence 998875321 111 1266777777776655 5787766655444 43322 2344444444
No 285
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=60.53 E-value=95 Score=27.86 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=41.0
Q ss_pred HHHHHHhCCCCEEEEeccCCC-CCc-----ccHHHHHHHHHHHHhcCcEEEE-ecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 106 AAQKAKSDGATRFCMGAAWRE-LKD-----RDLDNIENMICEVKKIGLETCL-TLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~~-~~~-----~~~~~~~~l~~~i~~~~~~i~~-~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.++...+.|+..|.+...+.+ .++ .-.+++.++++.+++.+..+.. ..|. ...++.|.+.|++.+++.
T Consensus 198 ~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~--~~~l~~l~~~g~d~~~~d 272 (359)
T 2inf_A 198 YVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGA--SHLAGDWHDLPLDVVGLD 272 (359)
T ss_dssp HHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC--GGGHHHHHTSSCSEEECC
T ss_pred HHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc--HHHHHHHHHhCCCEEEeC
Confidence 344455679998877654211 111 1134556666777665554433 3454 557889999999988763
No 286
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=60.49 E-value=86 Score=27.30 Aligned_cols=191 Identities=12% Similarity=0.084 Sum_probs=97.3
Q ss_pred cHHHHH-HHHHHHHh-c-CcEEEEecCCCCHHH----HHHHHH-hCCCeeeccCCCCHHHHhc-cCCCCCHHHHHHHHHH
Q psy8190 131 DLDNIE-NMICEVKK-I-GLETCLTLGMLNENQ----AYRLKK-VGLDYYNHNLDTSPKLYGD-IISTRDYENRLNTLKN 201 (348)
Q Consensus 131 ~~~~~~-~l~~~i~~-~-~~~i~~~~g~l~~e~----l~~Lk~-aG~~~i~~g~et~~e~l~~-i~~~~~~~~~~~~i~~ 201 (348)
..+.+. ++++.+++ . +..+.++.+.-+.+. ++.+.+ +|+|.|.+++-+ +..-+. ..-+.+.+...+.++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~-p~~~~g~~~~g~~~~~~~eii~~ 158 (311)
T 1ep3_A 80 GLEVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISC-PNVKHGGQAFGTDPEVAAALVKA 158 (311)
T ss_dssp CHHHHHHTHHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCS-EEGGGTTEEGGGCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCC-CCCCCchhhhcCCHHHHHHHHHH
Confidence 345553 35566665 4 566777766544433 344455 899988877654 111010 0012356777888888
Q ss_pred HHHc-CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccc----cCCCCC---C----CC-CCCCHHHHHHH
Q psy8190 202 VRNV-GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQ----IKGTPL---Y----GS-SILDPLEFIRT 268 (348)
Q Consensus 202 ~~~~-G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P----~~gT~l---~----~~-~~~~~~~~~~~ 268 (348)
+++. ++++.+-+..+.. +..+.+..+.+.+ ++.+.+..... ...|.- . .. .+......+..
T Consensus 159 v~~~~~~pv~vk~~~~~~----~~~~~a~~l~~~G--~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~ 232 (311)
T 1ep3_A 159 CKAVSKVPLYVKLSPNVT----DIVPIAKAVEAAG--ADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKL 232 (311)
T ss_dssp HHHHCSSCEEEEECSCSS----CSHHHHHHHHHTT--CSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHH
T ss_pred HHHhcCCCEEEEECCChH----HHHHHHHHHHHcC--CCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHH
Confidence 8876 7776554433432 2334456667777 78777643211 011110 0 00 11111112344
Q ss_pred HHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCc-----hHHHHHHHHcCCC
Q psy8190 269 IAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKT-----NDDSKLLKKLGIN 333 (348)
Q Consensus 269 ~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~-----~~~~~~i~~~G~~ 333 (348)
+...+... +..|-.++|-.+ .+....++.+||+.++.|..+.. ++.. ++..+.+...|+.
T Consensus 233 i~~i~~~~-~ipvia~GGI~~--~~d~~~~l~~GAd~V~vg~~~l~--~p~~~~~i~~~l~~~~~~~g~~ 297 (311)
T 1ep3_A 233 IHQVAQDV-DIPIIGMGGVAN--AQDVLEMYMAGASAVAVGTANFA--DPFVCPKIIDKLPELMDQYRIE 297 (311)
T ss_dssp HHHHHTTC-SSCEEECSSCCS--HHHHHHHHHHTCSEEEECTHHHH--CTTHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHhc-CCCEEEECCcCC--HHHHHHHHHcCCCEEEECHHHHc--CcHHHHHHHHHHHHHHHHcCCC
Confidence 44444333 223333443222 33445567789999988765433 3321 3445667888885
No 287
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=60.17 E-value=37 Score=29.30 Aligned_cols=45 Identities=18% Similarity=0.341 Sum_probs=33.0
Q ss_pred ccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 130 RDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 130 ~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+.+...++...+.. +..+....|..+.+.++.|+++|++.+.+|
T Consensus 189 vdl~~t~~L~~~ip~-~~~~VsESGI~t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 189 INKENQRKLISMIPS-NVVKVAKLGISERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp BCHHHHHHHHTTSCT-TSEEEEEESSCCHHHHHHHHHTTCCEEEEC
T ss_pred cCHHHHHHHHhhCCC-CCEEEEcCCCCCHHHHHHHHHCCCCEEEEC
Confidence 345555555544433 445555689999999999999999999987
No 288
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=60.12 E-value=11 Score=36.47 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=42.5
Q ss_pred HHHHHHHHhCCCeeeccC--CC-C-HHH-----HhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-S-PKL-----YGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRD 222 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~-~e~-----l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e 222 (348)
+.+..|++.|++.|.+.. ++ . ..- |..+.+. .+.++..+.++.||+.|+.|..++++.+ +....
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~~~~~~ 109 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVINHTSDEHP 109 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEECSBCCTTSH
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccchhh
Confidence 345666666666666542 11 1 111 1234332 3789999999999999999999999999 65433
No 289
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=60.01 E-value=47 Score=29.18 Aligned_cols=78 Identities=8% Similarity=-0.067 Sum_probs=54.5
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccC-----CC-----C------------CcccHHHHHHHHHHHHh-c--CcEEEEe
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAW-----RE-----L------------KDRDLDNIENMICEVKK-I--GLETCLT 152 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~-----~~-----~------------~~~~~~~~~~l~~~i~~-~--~~~i~~~ 152 (348)
.+.+++.+.++.+.+.|+..|.+.+.. .+ + .......-.++++.+++ . ++++..+
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~ 248 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT 248 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 356777777888888899888765431 00 0 00112344677778876 3 6889989
Q ss_pred cCCCCHHHHHHHHHhCCCeeecc
Q psy8190 153 LGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 153 ~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.|..+.+.+..+..+|.+.|.++
T Consensus 249 GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 249 GGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp SSCCSHHHHHHHHHHTCSEEEEC
T ss_pred CCCCCHHHHHHHHHcCCCEEEEc
Confidence 99999988888778999998765
No 290
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=60.01 E-value=30 Score=31.70 Aligned_cols=89 Identities=11% Similarity=0.123 Sum_probs=60.8
Q ss_pred HHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCC
Q psy8190 110 AKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIST 189 (348)
Q Consensus 110 ~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~ 189 (348)
+.+.|+..+.+-.|. +.+.+..+-. ++.+.+|.-.++.+.++.|.++|.+.=. +.+.-..|.+-.++
T Consensus 88 ~~~lGi~glRLD~Gf------~~~eia~ls~-----nlkIeLNASti~~~~l~~l~~~~~n~~~--l~a~HNFYPr~~TG 154 (372)
T 2p0o_A 88 LIELGVTGLRMDYGI------TIEQMAHASH-----KIDIGLNASTITLEEVAELKAHQADFSR--LEAWHNYYPRPETG 154 (372)
T ss_dssp HHHHTCCEEEECSSC------CHHHHHHHHT-----TSEEEEETTTCCHHHHHHHHHTTCCGGG--EEEECCCCCSTTCS
T ss_pred HHHcCCCEEEEcCCC------CHHHHHHHhc-----CCEEEEECccCCHHHHHHHHHcCCChHH--eEEeeccCCCCCCC
Confidence 344577777776552 1223332222 3788899999999999999999987422 11212345555567
Q ss_pred CCHHHHHHHHHHHHHcCCeeeE
Q psy8190 190 RDYENRLNTLKNVRNVGINICC 211 (348)
Q Consensus 190 ~~~~~~~~~i~~~~~~G~~i~~ 211 (348)
-+.+...+.=+++++.|+++.+
T Consensus 155 Ls~~~f~~~n~~~k~~Gi~t~A 176 (372)
T 2p0o_A 155 IGTTFFNEKNRWLKELGLQVFT 176 (372)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCcEEE
Confidence 7999999999999999998764
No 291
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=59.75 E-value=30 Score=30.76 Aligned_cols=38 Identities=16% Similarity=0.219 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHH
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVK 143 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~ 143 (348)
.++.++.++...+.|.+.+++-|- .+.+.+.++++.+.
T Consensus 177 ldeAi~Ra~ay~eAGAD~ifi~~~------~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 177 YEECIERLRAARDEGADVGLLEGF------RSKEQAAAAVAALA 214 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCC------SCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCEEEecCC------CCHHHHHHHHHHcc
Confidence 345555555555555555555321 12344555555554
No 292
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=59.55 E-value=77 Score=31.74 Aligned_cols=111 Identities=10% Similarity=0.078 Sum_probs=74.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEE---eccCCCC----C--------cccHHHHHHHHHHHHhcCcEEEEecCCCC-----
Q psy8190 98 LSIESVITAAQKAKSDGATRFCM---GAAWREL----K--------DRDLDNIENMICEVKKIGLETCLTLGMLN----- 157 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l---~gg~~~~----~--------~~~~~~~~~l~~~i~~~~~~i~~~~g~l~----- 157 (348)
.+.+...+.++.+.+.|+..|++ -.|+... . ..+--++.++++..++.|+.+.+......
T Consensus 368 ~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 368 ANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNY 447 (738)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCchhhH
Confidence 68899999999999999999999 4443210 0 00111378888888888887765322221
Q ss_pred ----HHHHHHHHHhCCCeeeccCCCCHHHHhccCCC-----C-CHHHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ----ENQAYRLKKVGLDYYNHNLDTSPKLYGDIIST-----R-DYENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ----~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~-----~-~~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
++.++.+++.|+..|-++.=.+ .|.++ + ...-..+.++.|.++++-|..|-
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~-----~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg 508 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGN-----IIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHE 508 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSS-----CBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEETT
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcccc-----CcCCcccccchHHHHHHHHHHHHHHHcCcEEEccC
Confidence 2578899999999999875321 11121 1 34566788889999998777654
No 293
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=59.55 E-value=94 Score=27.49 Aligned_cols=106 Identities=6% Similarity=0.005 Sum_probs=69.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCCHHH---HHHHHHhCCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLNENQ---AYRLKKVGLD 170 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~~e~---l~~Lk~aG~~ 170 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.-+.+. .+...++|+|
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gad 108 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGNTSEFY-ALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGAD 108 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccccCcc-cCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCC
Confidence 67889999999999999999877664 3433 45666667777766542 467777767645544 4455567999
Q ss_pred eeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEe
Q psy8190 171 YYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCG 212 (348)
Q Consensus 171 ~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~ 212 (348)
.+.+-.- .|. ..+.+..++-++.+.+ .++++..+
T Consensus 109 avlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiilY 143 (316)
T 3e96_A 109 AVMIHMP----IHP----YVTAGGVYAYFRDIIEALDFPSLVY 143 (316)
T ss_dssp EEEECCC----CCS----CCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred EEEEcCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 9875321 121 1266777777766654 46776544
No 294
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=59.12 E-value=14 Score=35.34 Aligned_cols=34 Identities=6% Similarity=0.193 Sum_probs=29.2
Q ss_pred cCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 186 IIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 186 i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
+.+. .+.++..+.++.||+.|+.|..++++.+ +.
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 109 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAAGMQVYADVVFDHKGG 109 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEecCCccC
Confidence 4443 3889999999999999999999999998 64
No 295
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=59.05 E-value=1e+02 Score=29.00 Aligned_cols=128 Identities=13% Similarity=0.116 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC
Q psy8190 101 ESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 101 eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et 178 (348)
++..+.++.+.+.|+..|.+.... . ......+.++.+++. ++.+.+ .+..+.+.++.+.++|++.|.++.+.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~-G----~~~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAH-G----HSRRVIETLEMIKADYPDLPVVA-GNVATPEGTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSC-C----SSHHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHHTTCSEEEECSSC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecC-C----chHHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHHcCCCEEEEcCCC
Confidence 445667778888999998885441 1 124566778888774 566544 34678899999999999999987654
Q ss_pred -C---HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 179 -S---PKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 179 -~---~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
+ ...+.... .-......+..+.+++.++++.+. |=-.+.+++.+.+ .++ .+.+.+.
T Consensus 310 G~~~~~~~~~~~g-~p~~~~l~~v~~~~~~~~ipvia~---GGI~~~~di~kal----a~G--Ad~V~iG 369 (494)
T 1vrd_A 310 GSICTTRVVAGVG-VPQLTAVMECSEVARKYDVPIIAD---GGIRYSGDIVKAL----AAG--AESVMVG 369 (494)
T ss_dssp STTCHHHHHHCCC-CCHHHHHHHHHHHHHTTTCCEEEE---SCCCSHHHHHHHH----HTT--CSEEEES
T ss_pred CccccccccCCCC-ccHHHHHHHHHHHHhhcCCCEEEE---CCcCCHHHHHHHH----HcC--CCEEEEC
Confidence 2 12222221 112333333333344446654321 1123667766655 356 6666654
No 296
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=59.05 E-value=37 Score=30.94 Aligned_cols=71 Identities=13% Similarity=0.014 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCC-CcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhC-CCeeecc
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWREL-KDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVG-LDYYNHN 175 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~-~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG-~~~i~~g 175 (348)
.++..+.++.+.+.|+..|.+.++.... +..+ .++++.+++ .++.+.++.+. +.+.++.+.+.| +|.|.++
T Consensus 250 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 250 EADALYLIEELAKRGIAYLHMSETDLAGGKPYS----EAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCcccCCCccc----HHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEEEC
Confidence 3344444555555566655554431100 0111 123344443 24444444443 555555555555 5555543
No 297
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=59.02 E-value=55 Score=29.74 Aligned_cols=69 Identities=14% Similarity=0.131 Sum_probs=46.6
Q ss_pred HHHHHhCCCCEEEEeccCCCC-C--------cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAAWREL-K--------DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~-~--------~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.++.+.... . ......+.++.+..+..++++.+..|..+.+.+.....+|.+.+-+|
T Consensus 159 A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 159 TKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 455667899998874321110 0 12334444444444445789988999989999999999999999876
No 298
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=59.01 E-value=24 Score=34.21 Aligned_cols=94 Identities=12% Similarity=0.029 Sum_probs=60.9
Q ss_pred HHHHHHHHHhCCCCEEEEeccCC--CCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHH-hCCCeeeccCCC
Q psy8190 103 VITAAQKAKSDGATRFCMGAAWR--ELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKK-VGLDYYNHNLDT 178 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~~--~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~-aG~~~i~~g~et 178 (348)
..+.++.+.+.|+..|.+.+-.. .....+. ++++.+++ ..+++.++.|..+.+.+..+.+ .|++.+-+|=
T Consensus 454 ~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~----~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~-- 527 (555)
T 1jvn_A 454 VWELTRACEALGAGEILLNCIDKDGSNSGYDL----ELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAG-- 527 (555)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGGTTTCSCCCH----HHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESH--
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCH----HHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHH--
Confidence 34566677788999998865211 1122344 44445554 4788999999999999999988 7999877542
Q ss_pred CHHHHhccCCCCCHHHHHHHHHHHHHcCCeee
Q psy8190 179 SPKLYGDIISTRDYENRLNTLKNVRNVGINIC 210 (348)
Q Consensus 179 ~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~ 210 (348)
-+ .....++.+..+ .+++.|+.+.
T Consensus 528 --a~---~~~~~~~~e~~~---~l~~~gi~~r 551 (555)
T 1jvn_A 528 --MF---HRGEFTVNDVKE---YLLEHGLKVR 551 (555)
T ss_dssp --HH---HTTSCCHHHHHH---HHHHTTCCCC
T ss_pred --HH---HcCCCCHHHHHH---HHHHCCCccc
Confidence 12 222346665554 4567788654
No 299
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=58.90 E-value=24 Score=32.31 Aligned_cols=35 Identities=9% Similarity=0.002 Sum_probs=21.6
Q ss_pred CCHHHHHHhhcC-------ChHHHHHHHHHHHHhhcCCCceEE
Q psy8190 29 WKLDEVINLFNL-------PFNDLLFRAQKVHRKYFDANEIEL 64 (348)
Q Consensus 29 ls~~e~~~Ll~~-------~~~~l~~~A~~~~~~~~~g~~v~~ 64 (348)
-+..+++++|.. +..++...|.++-+... .+.|.+
T Consensus 53 ~~L~~fl~~f~~~~~vl~~~~edl~~~a~e~~ed~a-~dgV~Y 94 (367)
T 3iar_A 53 LTLPDFLAKFDYYMPAIAGCREAIKRIAYEFVEMKA-KEGVVY 94 (367)
T ss_dssp CCHHHHHGGGGGTHHHHTTCHHHHHHHHHHHHHHHH-TTTEEE
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HcCCEE
Confidence 466777776653 23567777777766655 455654
No 300
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=58.88 E-value=56 Score=28.86 Aligned_cols=96 Identities=10% Similarity=0.014 Sum_probs=56.7
Q ss_pred cccHHHHHHHHHHHHhcCcEE---EEecC---CCCHHHHHHHHHhCC----CeeeccCCCCHHHHhccCCC-CCHHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLET---CLTLG---MLNENQAYRLKKVGL----DYYNHNLDTSPKLYGDIIST-RDYENRLN 197 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~i---~~~~g---~l~~e~l~~Lk~aG~----~~i~~g~et~~e~l~~i~~~-~~~~~~~~ 197 (348)
..+.+.+.++++.+.+.|+.- +-+.| .++.++-+.+.+.=+ .++.+ ..+-+ .+.++.++
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pv----------iaGvg~~~t~~ai~ 100 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLL----------LAGSGCESTQATVE 100 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEE----------EEECCCSSHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcE----------EEecCCCCHHHHHH
Confidence 367888899998887766543 22344 466654444443311 22221 11112 37778888
Q ss_pred HHHHHHHcCCeeeEe-Eeeec--CCCHHHHHHHHHHHHhc
Q psy8190 198 TLKNVRNVGINICCG-GIIGL--SESRDQRAELIFQLANL 234 (348)
Q Consensus 198 ~i~~~~~~G~~i~~~-~i~Gl--get~e~~~~~l~~l~~l 234 (348)
..+.+.+.|..-..- -.|-. ..+.+.+.++++.+.+-
T Consensus 101 la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a 140 (307)
T 3s5o_A 101 MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADL 140 (307)
T ss_dssp HHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhh
Confidence 888999998853221 12211 25888999999888765
No 301
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=58.86 E-value=80 Score=26.45 Aligned_cols=114 Identities=9% Similarity=-0.047 Sum_probs=70.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEE-ecC-CCC----HHHHHHHHHhCCCe
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL-TLG-MLN----ENQAYRLKKVGLDY 171 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~-~~g-~l~----~e~l~~Lk~aG~~~ 171 (348)
.+.++.++ .+.+.|++.|-+.... -+...+.+.+.++.+.+++.++.+.. ++. .-. ...++..++.|+..
T Consensus 30 ~~~~~~l~---~~~~~G~~~vEl~~~~-~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~ 105 (257)
T 3lmz_A 30 FDLDTTLK---TLERLDIHYLCIKDFH-LPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKL 105 (257)
T ss_dssp SCHHHHHH---HHHHTTCCEEEECTTT-SCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSE
T ss_pred CCHHHHHH---HHHHhCCCEEEEeccc-CCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCE
Confidence 45666654 4567799999876541 12234566777888888888887653 211 122 24456666779998
Q ss_pred eeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEee--ec-CCCHHHHHHHHH
Q psy8190 172 YNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGII--GL-SESRDQRAELIF 229 (348)
Q Consensus 172 i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~--Gl-get~e~~~~~l~ 229 (348)
|.+.. . .+.+.+..+.+++.|+.+...-.- +. ..|.++..+.++
T Consensus 106 v~~~p--~------------~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 106 IVGVP--N------------YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTK 152 (257)
T ss_dssp EEEEE--C------------GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHT
T ss_pred EEecC--C------------HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHH
Confidence 87532 1 234455677888899988776552 22 456666655543
No 302
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=58.49 E-value=14 Score=36.25 Aligned_cols=63 Identities=16% Similarity=0.217 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCCeeeccC--CC-C-HHH-----HhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCH
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DT-S-PKL-----YGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESR 221 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et-~-~e~-----l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~ 221 (348)
+.|..|++.|++.|.+.. ++ . ..- |..+.+. .+.++..+.++.||+.|+.|..++++.+ +...
T Consensus 44 ~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~ 117 (589)
T 3aj7_A 44 SKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEH 117 (589)
T ss_dssp HTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEecccccccch
Confidence 346677777777777642 22 1 111 2244443 3889999999999999999999999999 6543
No 303
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=58.18 E-value=8.9 Score=37.24 Aligned_cols=63 Identities=14% Similarity=0.234 Sum_probs=42.9
Q ss_pred HHHHHHHhCCCeeeccC--CC-C-HHH-----HhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHH
Q psy8190 160 QAYRLKKVGLDYYNHNL--DT-S-PKL-----YGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRD 222 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~--et-~-~e~-----l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e 222 (348)
.|..|++.|++.|.+.. ++ . ..- |..+.+. .+.++..+.++.||+.|+.|..++++.+ +....
T Consensus 36 ~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~s~~~~ 109 (558)
T 1uok_A 36 KLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVVNHTSDEHN 109 (558)
T ss_dssp THHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSH
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccccch
Confidence 45666777777776642 22 1 111 2234442 3789999999999999999999999999 65433
No 304
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=58.09 E-value=35 Score=30.28 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=19.4
Q ss_pred ccHHHHHHHHHHHHhcCcE---EEEecCCCCHHHHHHH
Q psy8190 130 RDLDNIENMICEVKKIGLE---TCLTLGMLNENQAYRL 164 (348)
Q Consensus 130 ~~~~~~~~l~~~i~~~~~~---i~~~~g~l~~e~l~~L 164 (348)
.+.+++.++++.+.+.|.. +.=+.|..+++.+..+
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~l 191 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETV 191 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHH
Confidence 4566777777776665432 2224566666554433
No 305
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=57.93 E-value=48 Score=28.83 Aligned_cols=106 Identities=12% Similarity=0.087 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhcC---cEEEEecCCCCH----HHHHHHHHhCCCeeeccCCCCHHH----------HhccCCCCCHHHHH
Q psy8190 134 NIENMICEVKKIG---LETCLTLGMLNE----NQAYRLKKVGLDYYNHNLDTSPKL----------YGDIISTRDYENRL 196 (348)
Q Consensus 134 ~~~~l~~~i~~~~---~~i~~~~g~l~~----e~l~~Lk~aG~~~i~~g~et~~e~----------l~~i~~~~~~~~~~ 196 (348)
++.+.++.+++.+ +-..+..|.-+. +.++.|.++|+|-+.+|+--++-+ .+.+..+.+.++.+
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 4555666665432 233445665443 557778888999999887542211 22345567888999
Q ss_pred HHHHHHHHcCCeeeEeEeeecCCCH-H--HHHHHHHHHHhcCCCCCeeec
Q psy8190 197 NTLKNVRNVGINICCGGIIGLSESR-D--QRAELIFQLANLNPYPESVPI 243 (348)
Q Consensus 197 ~~i~~~~~~G~~i~~~~i~Glget~-e--~~~~~l~~l~~l~~~~~~i~~ 243 (348)
+.++.+++.+..+-..+| |. .++ . ...+.++.+.+.+ ++.+-+
T Consensus 86 ~~v~~~r~~~~~~Pivlm-~Y-~n~v~~~g~~~f~~~~~~aG--vdGvIi 131 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLL-MY-ANLVYARGIDDFYQRCQKAG--VDSVLI 131 (271)
T ss_dssp HHHHHHHHHCTTSCEEEE-EC-HHHHHHTCHHHHHHHHHHHT--CCEEEE
T ss_pred HHHHHHHhcCCCCCEEEE-ec-CcHHHHHhHHHHHHHHHHCC--CCEEEE
Confidence 999999876432221221 11 010 0 1234555566676 666554
No 306
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=57.70 E-value=65 Score=28.09 Aligned_cols=110 Identities=10% Similarity=0.025 Sum_probs=70.5
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCC-CHHH---HHHHHHhCCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI--GLETCLTLGML-NENQ---AYRLKKVGLD 170 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l-~~e~---l~~Lk~aG~~ 170 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. + +.+..|.. +.+. .+..+++|+|
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~-~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gad 92 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGTTGLGP-ALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAE 92 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETSTTTTGG-GSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 67888899999999999999887664 3433 45677778888877653 5 65666654 3444 4455667999
Q ss_pred eeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 171 YYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 171 ~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
.+.+-.- .|.+ ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 93 avlv~~P----~y~~---~~s~~~l~~~f~~va~a~~lPiilYn~P~~ 133 (286)
T 2r91_A 93 AVASLPP----YYFP---RLSERQIAKYFRDLCSAVSIPVFLYNYPAA 133 (286)
T ss_dssp EEEECCS----CSST---TCCHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred EEEEcCC----cCCC---CCCHHHHHHHHHHHHHhcCCCEEEEeChhh
Confidence 8875331 1211 0256677777766554 4677665544433
No 307
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=57.65 E-value=45 Score=29.30 Aligned_cols=60 Identities=17% Similarity=0.240 Sum_probs=40.1
Q ss_pred HHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 108 QKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 108 ~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
+++.+.|++.|.+.- . ..+.+.+.++.++. .+.+.+ .|-++.+.+..+.++|+|.+++|-
T Consensus 210 ~eA~~aGaD~I~ld~----~---~~~~~k~av~~v~~-~ipi~A-sGGIt~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 210 EEALEAGADLILLDN----F---PLEALREAVRRVGG-RVPLEA-SGNMTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp HHHHHHTCSEEEEES----C---CHHHHHHHHHHHTT-SSCEEE-ESSCCHHHHHHHHHHTCSEEECTH
T ss_pred HHHHHcCCCEEEECC----C---CHHHHHHHHHHhCC-CCeEEE-EcCCCHHHHHHHHHcCCCEEEEcH
Confidence 344455777776632 1 23556666666653 355554 456899999999999999999753
No 308
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=57.62 E-value=79 Score=26.02 Aligned_cols=175 Identities=6% Similarity=-0.036 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEE--EecCCCCHHHHHHHHHhCCCeeec
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETC--LTLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~--~~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
+.++.++.++.+.. .+..+-++.+. . ...=.++++.+++. +..+. +.....+.-..+.+.++|+|.+.+
T Consensus 14 ~~~~~~~~~~~~~~-~v~~~kv~~~~----f--~~~G~~~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itv 86 (216)
T 1q6o_A 14 TMDSAYETTRLIAE-EVDIIEVGTIL----C--VGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTV 86 (216)
T ss_dssp SHHHHHHHHHHHGG-GCSEEEECHHH----H--HHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHhcc-cCCEEEECHHH----H--HHhCHHHHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEE
Confidence 45666666665543 34555554331 0 11112455666653 44433 344455555577889999999998
Q ss_pred cCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeec--ccccccCCC
Q psy8190 175 NLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPI--NNLVQIKGT 252 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~--~~l~P~~gT 252 (348)
..+...+. ...+++.+++.|..+...++-++. ....+.+ .+++ ...+.+ ......||.
T Consensus 87 h~~~g~~~------------l~~~~~~~~~~g~~~~~~ll~~~t---~~~~~~l---~~~~--~~~~vl~~a~~~~~~G~ 146 (216)
T 1q6o_A 87 ICCADINT------------AKGALDVAKEFNGDVQIELTGYWT---WEQAQQW---RDAG--IGQVVYHRSRDAQAAGV 146 (216)
T ss_dssp ETTSCHHH------------HHHHHHHHHHTTCEEEEEECSCCC---HHHHHHH---HHTT--CCEEEEECCHHHHHTTC
T ss_pred eccCCHHH------------HHHHHHHHHHcCCCceeeeeeCCC---hhhHHHH---HhcC--cHHHHHHHHHHHHhcCC
Confidence 77664332 234466677788876544321443 2222333 3333 222222 112223442
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCC-CCceeccccccccchhhHHHHHHhCcceeeeCCeec
Q psy8190 253 PLYGSSILDPLEFIRTIAVARITMP-TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLL 313 (348)
Q Consensus 253 ~l~~~~~~~~~~~~~~~a~~R~~lp-~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~ 313 (348)
. . ++++.. ..|...+ +..|.+.+|- +++....++.+|||.++.|..+.
T Consensus 147 ~--g----~~~~i~----~lr~~~~~~~~i~v~GGI---~~~~~~~~~~aGad~ivvG~~I~ 195 (216)
T 1q6o_A 147 A--W----GEADIT----AIKRLSDMGFKVTVTGGL---ALEDLPLFKGIPIHVFIAGRSIR 195 (216)
T ss_dssp C--C----CHHHHH----HHHHHHHTTCEEEEESSC---CGGGGGGGTTSCCSEEEESHHHH
T ss_pred C--C----CHHHHH----HHHHhcCCCCcEEEECCc---ChhhHHHHHHcCCCEEEEeehhc
Confidence 1 1 333332 2333333 2224444442 12223457889999998886553
No 309
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=57.60 E-value=44 Score=31.98 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=48.9
Q ss_pred HHHHHhCCCCEEEEeccCCCC---------CcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAAWREL---------KDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~---------~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.++.|+... .......+.++.+..++.++++.++.|..+.+.+.....+|.+.+-+|
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheec
Confidence 445667799988774432110 012344555666666667899999999999999998899999999876
No 310
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=57.51 E-value=93 Score=26.77 Aligned_cols=153 Identities=12% Similarity=0.134 Sum_probs=84.4
Q ss_pred cCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHH-------
Q psy8190 153 LGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRA------- 225 (348)
Q Consensus 153 ~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~------- 225 (348)
.|.++ ...|+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++.
T Consensus 75 TGEiS---~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~v 142 (255)
T 1tre_A 75 TGETS---AAMLKDIGAQYIIIGH----SERRTYH-KESDELIAKKFAVLKEQGLTP----VLCIGETEAENEAGKTEEV 142 (255)
T ss_dssp TTCCC---HHHHHHHTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHH
T ss_pred CCcCC---HHHHHHcCCCEEEECc----ccccccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCCHHHH
Confidence 45555 4678899999999875 2222221 346677777799999999964 333478776622
Q ss_pred --HHHHH-HHhcCCCCCeee--ccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC------Ccee-ccccccccc
Q psy8190 226 --ELIFQ-LANLNPYPESVP--INNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT------SRIR-MSAGRKEMG 291 (348)
Q Consensus 226 --~~l~~-l~~l~~~~~~i~--~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~------~~i~-~s~g~~~l~ 291 (348)
.-++. +..+. ++.+. +-.|-|. =||. ..++++..-++.+..|..+.. ..++ +.+|-.+-.
T Consensus 143 v~~Ql~~~l~~~~--~~~~~~vvIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~~ 216 (255)
T 1tre_A 143 CARQIDAVLKTQG--AAAFEGAVIAYEPVWAIGTG----KSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNAS 216 (255)
T ss_dssp HHHHHHHHHHHHC--GGGGTTCEEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCCCTT
T ss_pred HHHHHHHHHhcCC--HHHcCcEEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHH
Confidence 22221 22233 22100 1123332 2453 457899999999999987532 1233 233333322
Q ss_pred hhhHHHHHHhCcceeeeCCeeccCCCCCchHHHHHHHH
Q psy8190 292 ETTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKK 329 (348)
Q Consensus 292 ~~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i~~ 329 (348)
+...+.-..++|+++.|.- .-.+++..++++.
T Consensus 217 -N~~~l~~~~diDG~LVGgA-----sL~a~~F~~Ii~~ 248 (255)
T 1tre_A 217 -NAAELFAQPDIDGALVGGA-----SLKADAFAVIVKA 248 (255)
T ss_dssp -THHHHHTSTTCCEEEESGG-----GGCHHHHHHHHHH
T ss_pred -HHHHHHcCCCCCeeEecHH-----HhChHHHHHHHHH
Confidence 3333333478899876541 1223455666654
No 311
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=57.50 E-value=4.7 Score=34.38 Aligned_cols=71 Identities=13% Similarity=0.089 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCC--CCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWR--ELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~--~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
+..+.++.+.+.|++.+++.+-.. ...... .++++.++..++++.+..|..+.+.++.+.++|++.+.++-
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~----~~~i~~i~~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~ 103 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAIENSGEN----LPVLEKLSEFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSS 103 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTT----HHHHHHGGGGGGGEEEESSCCSHHHHHHHHHTTCCEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEecccccccCCchh----HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHCCCCEEEECc
Confidence 344555666778999988864200 011112 34455554346788888999999999999999999998754
No 312
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=57.26 E-value=27 Score=34.64 Aligned_cols=87 Identities=17% Similarity=0.180 Sum_probs=58.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCC------cccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhC-C
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELK------DRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVG-L 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~------~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG-~ 169 (348)
.+.++..+.++.+.+.|+..+.++++...+. ........+.++.+++ .++++.++.+..+.+.++.+.+.| +
T Consensus 225 ~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~a 304 (671)
T 1ps9_A 225 GTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDA 304 (671)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCC
Confidence 3567888888888888999998876532110 0111234567777876 467777777777999999998888 8
Q ss_pred CeeeccCCC--CHHHHh
Q psy8190 170 DYYNHNLDT--SPKLYG 184 (348)
Q Consensus 170 ~~i~~g~et--~~e~l~ 184 (348)
|.|.++=.. +|.+..
T Consensus 305 D~V~~gR~~l~~P~l~~ 321 (671)
T 1ps9_A 305 DMVSMARPFLADAELLS 321 (671)
T ss_dssp SEEEESTHHHHCTTHHH
T ss_pred CEEEeCHHHHhCcHHHH
Confidence 999886332 344443
No 313
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=57.25 E-value=12 Score=37.48 Aligned_cols=59 Identities=8% Similarity=0.057 Sum_probs=44.0
Q ss_pred HHHHHHHHhCCCeeeccC--CCC-HH--------------------------HHhccCCC-CCHHHHHHHHHHHHHcCCe
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DTS-PK--------------------------LYGDIIST-RDYENRLNTLKNVRNVGIN 208 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et~-~e--------------------------~l~~i~~~-~~~~~~~~~i~~~~~~G~~ 208 (348)
+.|..|++.|++.|.+.. ++. .. -|..+.+. .+.++..+.++.+|+.|+.
T Consensus 257 ~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~GI~ 336 (695)
T 3zss_A 257 RRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLE 336 (695)
T ss_dssp GGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 568888888888888752 221 00 03455543 3789999999999999999
Q ss_pred eeEeEeeec
Q psy8190 209 ICCGGIIGL 217 (348)
Q Consensus 209 i~~~~i~Gl 217 (348)
|..++.+..
T Consensus 337 VilD~V~Nh 345 (695)
T 3zss_A 337 IALDFALQC 345 (695)
T ss_dssp EEEEECCEE
T ss_pred EEEEeeccC
Confidence 999999986
No 314
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=57.23 E-value=30 Score=31.58 Aligned_cols=73 Identities=15% Similarity=0.217 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
.+...+.++.+.+.|++-|.+.... .. .+.+.+.++.+++. ++.+.+- +..+.+..+.+.++|+|.|.++..
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~--G~---~~~~~e~I~~ir~~~~~~~Vi~G-~V~T~e~A~~a~~aGaD~I~Vg~g 171 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAH--AH---AKYVGKTLKSLRQLLGSRCIMAG-NVATYAGADYLASCGADIIKAGIG 171 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSC--CS---SHHHHHHHHHHHHHHTTCEEEEE-EECSHHHHHHHHHTTCSEEEECCS
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCC--CC---cHhHHHHHHHHHHhcCCCeEEEc-CcCCHHHHHHHHHcCCCEEEEcCC
Confidence 3556667788888899977774331 11 14567788888874 5666541 257889999999999999998765
Q ss_pred C
Q psy8190 178 T 178 (348)
Q Consensus 178 t 178 (348)
.
T Consensus 172 ~ 172 (361)
T 3r2g_A 172 G 172 (361)
T ss_dssp S
T ss_pred C
Confidence 4
No 315
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=57.20 E-value=41 Score=29.59 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=72.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCC-HHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLN-ENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~-~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++...+. .+++.+..|..+ .+. .+..+++|+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTTGESP-TLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchh-hCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCC
Confidence 67888899999999999999887664 4433 45666667777766542 366766676544 443 455566799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
|.+.+-.- .|.+ .+.+...+-++.+.+ .++++..+-+-+.
T Consensus 97 davlv~~P----~y~~----~s~~~l~~~f~~va~a~~lPiilYn~P~~ 137 (297)
T 2rfg_A 97 DAVLCVAG----YYNR----PSQEGLYQHFKMVHDAIDIPIIVYNIPPR 137 (297)
T ss_dssp SEEEECCC----TTTC----CCHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred CEEEEcCC----CCCC----CCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 98875331 1211 266777777766554 5777766555544
No 316
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=57.20 E-value=6.6 Score=37.31 Aligned_cols=35 Identities=11% Similarity=0.072 Sum_probs=29.6
Q ss_pred ccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CC
Q psy8190 185 DIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SE 219 (348)
Q Consensus 185 ~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-ge 219 (348)
.+.+. .+.++..+.++.+|+.|++|..++++.+ +.
T Consensus 89 ~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 89 DVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp EECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 45553 3789999999999999999999999998 54
No 317
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=57.05 E-value=1e+02 Score=26.98 Aligned_cols=95 Identities=12% Similarity=0.083 Sum_probs=54.2
Q ss_pred cccHHHHHHHHHHHHhcCcEEE---EecC---CCCHHHHHHHHHhCCCe---eeccCCCCHHHHhccCCCCCHHHHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLETC---LTLG---MLNENQAYRLKKVGLDY---YNHNLDTSPKLYGDIISTRDYENRLNTL 199 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~i~---~~~g---~l~~e~l~~Lk~aG~~~---i~~g~et~~e~l~~i~~~~~~~~~~~~i 199 (348)
..+.+.+.++++.+.+.|+.-- -+.| .++.++-..+.+.=++. |-.|+. ..+.++.++..
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg-----------~~~t~~ai~la 84 (293)
T 1w3i_A 16 RIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVG-----------GLNLDDAIRLA 84 (293)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECC-----------CSCHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecC-----------CCCHHHHHHHH
Confidence 3677888888888777665432 2333 46665444444332211 222221 23667777778
Q ss_pred HHHHHcCCeeeEe-EeeecC-CCHHHHHHHHHHHHhc
Q psy8190 200 KNVRNVGINICCG-GIIGLS-ESRDQRAELIFQLANL 234 (348)
Q Consensus 200 ~~~~~~G~~i~~~-~i~Glg-et~e~~~~~l~~l~~l 234 (348)
+.+.++|..-..- -.|-.. -+.+.+.++++.+.+-
T Consensus 85 ~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (293)
T 1w3i_A 85 KLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV 121 (293)
T ss_dssp HHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhh
Confidence 8888888752221 122124 5788888888877764
No 318
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=57.02 E-value=51 Score=30.95 Aligned_cols=113 Identities=14% Similarity=0.064 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-CcEEEEecC--CCCHHHHHHHHHhCCCeeeccC
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-GLETCLTLG--MLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~~g--~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.+.+....+.+...|++.+.-....+.|.....+.+....+..... .+.+....+ .-..+.++.|.++|+..+.+.+
T Consensus 90 ~~~~~~~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~~~l~~l~~~G~~~~K~~~ 169 (473)
T 3e74_A 90 WEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFV 169 (473)
T ss_dssp --CHHHHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTTCTTTHHHHHHHTCSCEEEEC
T ss_pred HHHHHHHHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccchHHHHHHHHHcCCCEEEEec
Confidence 3455555666778899998665412334444555565555555542 234333222 2224567888899998886655
Q ss_pred CC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe
Q psy8190 177 DT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCG 212 (348)
Q Consensus 177 et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~ 212 (348)
.. .......-.+..+.+...++++.+++.|..+..+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 206 (473)
T 3e74_A 170 ATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVH 206 (473)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred cccCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEE
Confidence 43 1211111112346778889999999999877665
No 319
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=56.81 E-value=38 Score=27.93 Aligned_cols=103 Identities=18% Similarity=0.276 Sum_probs=57.9
Q ss_pred CHHHHHHHH-HHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEE-Ee-------cC--CCCHHHHHHHHHh
Q psy8190 99 SIESVITAA-QKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETC-LT-------LG--MLNENQAYRLKKV 167 (348)
Q Consensus 99 ~~eei~~~~-~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~-~~-------~g--~l~~e~l~~Lk~a 167 (348)
..++.++.+ +.+.+.|++.|.+.+. +......+.+.+ .++.+. ++ +| .+++|..+.|.+.
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~----sG~TA~k~~e~~-----~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~ 97 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASS----YGDTAMKALEMA-----EGLEVVVVTYHTGFVREGENTMPPEVEEELRKR 97 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECS----SSHHHHHHHHHC-----TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeC----CChHHHHHHHHh-----cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhC
Confidence 455555554 4566779999988654 122334444433 344433 22 44 6789999999999
Q ss_pred CCCeeecc--CCCCHH-HHhccCCCCCHHHHHHHHHHHHHcCCeee
Q psy8190 168 GLDYYNHN--LDTSPK-LYGDIISTRDYENRLNTLKNVRNVGINIC 210 (348)
Q Consensus 168 G~~~i~~g--~et~~e-~l~~i~~~~~~~~~~~~i~~~~~~G~~i~ 210 (348)
|+.-+.-. +-..++ +.++.+.-...+-+-++++.+-..|++++
T Consensus 98 G~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~ 143 (201)
T 1vp8_A 98 GAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVC 143 (201)
T ss_dssp TCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred CCEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEE
Confidence 99776632 222233 33444433444555577773444444444
No 320
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=56.79 E-value=61 Score=29.80 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=45.4
Q ss_pred HHHHHHHhCCCCEEEEeccCCC---------CCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRE---------LKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~---------~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+.++.+.+.|++.|.+++++.+ ......+.+.++.+.....++++.++.|..+.+.+..+..+|.+.+.+|
T Consensus 206 ~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 206 EAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp HHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhC
Confidence 3445566789999888322110 0111233333333333335788988999999888888888999999875
No 321
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=56.57 E-value=1e+02 Score=26.85 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=50.2
Q ss_pred cccHHHHHHHHHHHHhcCcEEEE---ecC---CCCHHHHHHHHHhCCC---eeeccCCCCHHHHhccCCCCCHHHHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLETCL---TLG---MLNENQAYRLKKVGLD---YYNHNLDTSPKLYGDIISTRDYENRLNTL 199 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~i~~---~~g---~l~~e~l~~Lk~aG~~---~i~~g~et~~e~l~~i~~~~~~~~~~~~i 199 (348)
..+.+.+.++++.+.+.|+.--+ +.| .++.++-+.+.+.-++ .|-.|+. ..+.++.++..
T Consensus 15 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg-----------~~~t~~ai~la 83 (286)
T 2r91_A 15 RLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVA-----------SLNADEAIALA 83 (286)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECC-----------CSSHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeC-----------CCCHHHHHHHH
Confidence 35667777888777766554322 333 3555443333322111 1333332 23566777777
Q ss_pred HHHHHcCCeee-EeEeeecC-CCHHHHHHHHHHHHhc
Q psy8190 200 KNVRNVGINIC-CGGIIGLS-ESRDQRAELIFQLANL 234 (348)
Q Consensus 200 ~~~~~~G~~i~-~~~i~Glg-et~e~~~~~l~~l~~l 234 (348)
+.+.++|..-. +.-.|-.. -+.+.+.++++.+.+-
T Consensus 84 ~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 120 (286)
T 2r91_A 84 KYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA 120 (286)
T ss_dssp HHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 77777776422 21122124 5777888887777664
No 322
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=56.17 E-value=8.4 Score=35.89 Aligned_cols=30 Identities=10% Similarity=0.121 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEeeec-CCC
Q psy8190 191 DYENRLNTLKNVRNVGINICCGGIIGL-SES 220 (348)
Q Consensus 191 ~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get 220 (348)
+.++..+.++.+|+.|+.|..++++.+ +..
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTFD 103 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCSC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccCC
Confidence 789999999999999999999999998 543
No 323
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=56.14 E-value=51 Score=28.87 Aligned_cols=112 Identities=7% Similarity=0.013 Sum_probs=70.8
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHHHHHHHHH---hC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NENQAYRLKK---VG 168 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e~l~~Lk~---aG 168 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. .+++.+..|.. +.+.++..+. +|
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVASGTSAIVSVGTTGESA-TLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSG 96 (292)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSS
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcC
Confidence 367888999999988899999887664 3433 45666667777766542 46677777754 4555555544 58
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
+|.+.+-.- .|. ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 97 adavlv~~P----~y~----~~s~~~l~~~f~~ia~a~~lPiilYn~P~~ 138 (292)
T 2ojp_A 97 IVGCLTVTP----YYN----RPSQEGLYQHFKAIAEHTDLPQILYNVPSR 138 (292)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHTTCSSCEEEECCHHH
T ss_pred CCEEEECCC----CCC----CCCHHHHHHHHHHHHHhcCCCEEEEeCcch
Confidence 888764321 111 1266777777776655 4676655444333
No 324
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=56.09 E-value=79 Score=28.71 Aligned_cols=66 Identities=18% Similarity=0.184 Sum_probs=36.7
Q ss_pred HHhCCCCEEEEeccCC-CCCcc-----cHHHHHHHHHHHHhc----CcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 110 AKSDGATRFCMGAAWR-ELKDR-----DLDNIENMICEVKKI----GLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 110 ~~~~G~~~i~l~gg~~-~~~~~-----~~~~~~~l~~~i~~~----~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
..+.|+.-|.+...+. ..++. ...++.++++.+++. ++.+....+.. ...++.|.+.|++.+++.-
T Consensus 206 qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~-~~~l~~l~~~g~d~i~~d~ 281 (368)
T 4exq_A 206 QIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG-GLWLEDLAATGVDAVGLDW 281 (368)
T ss_dssp HHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC-GGGHHHHHTSSCSEEECCT
T ss_pred HHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc-HHHHHHHHHhCCCEEeeCC
Confidence 3567998886644321 12221 233455555555542 24443333222 4678889999999987643
No 325
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=56.07 E-value=98 Score=26.62 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=77.7
Q ss_pred cCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHH-------
Q psy8190 153 LGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRA------- 225 (348)
Q Consensus 153 ~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~------- 225 (348)
.|.++ ...|+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++.
T Consensus 77 TGEiS---~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~v 144 (256)
T 1aw2_A 77 TGDMS---PAMLKEFGATHIIIGH----SERREYH-AESDEFVAKKFAFLKENGLTP----VLCIGESDAQNEAGETMAV 144 (256)
T ss_dssp TTCCC---HHHHHHHTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHHTCEE----EEEECCCHHHHHTTCHHHH
T ss_pred cCccC---HHHHHHcCCCEEEECc----hhhcccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCCHHHH
Confidence 45555 5678899999999876 2222221 346677777789999999964 333478776622
Q ss_pred --HHHHH-HHhcCCCCCeee--ccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCC------cee-ccccccccc
Q psy8190 226 --ELIFQ-LANLNPYPESVP--INNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPTS------RIR-MSAGRKEMG 291 (348)
Q Consensus 226 --~~l~~-l~~l~~~~~~i~--~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~------~i~-~s~g~~~l~ 291 (348)
.-++. +..+. ++.+. +-.|-|. =||- ..++++..-++.+..|..+... .++ +.+|-.+-
T Consensus 145 v~~Ql~~~l~~~~--~~~~~~vvIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV~~- 217 (256)
T 1aw2_A 145 CARQLDAVINTQG--VEALEGAIIAYEPIWAIGTG----KAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSVKP- 217 (256)
T ss_dssp HHHHHHHHHHHHC--GGGGTTCEEEECCTTTTTSS----CCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCCCT-
T ss_pred HHHHHHHHHhcCC--HHHcCCEEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCH-
Confidence 22221 22233 22110 1123332 2443 4579999999999999876431 233 22333332
Q ss_pred hhhHHHHHHhCcceeeeCC
Q psy8190 292 ETTQAFCFLAGANSIFYGD 310 (348)
Q Consensus 292 ~~~~~~~l~~GAn~~~~~~ 310 (348)
.+...+.-..++|+++.|.
T Consensus 218 ~N~~~l~~~~diDG~LVGg 236 (256)
T 1aw2_A 218 ENAAAYFAQPDIDGALVGG 236 (256)
T ss_dssp TTHHHHTTSTTCCEEEESG
T ss_pred HHHHHHHcCCCCCeeeecH
Confidence 2333333345888887654
No 326
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=55.93 E-value=6.1 Score=35.10 Aligned_cols=57 Identities=16% Similarity=0.099 Sum_probs=25.0
Q ss_pred hCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-----CcEEEEecCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 112 SDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-----GLETCLTLGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 112 ~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-----~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
+.|+..|.+... +++.+.++++.++.. .+.+.++.| ++.+.+..+.++|+|.+.+|-
T Consensus 217 ~aGaD~I~ld~~-------~~~~l~~~v~~l~~~~~g~~~v~I~ASGG-It~~ni~~~~~~GvD~i~vGs 278 (294)
T 3c2e_A 217 EAGADVIMLDNF-------KGDGLKMCAQSLKNKWNGKKHFLLECSGG-LNLDNLEEYLCDDIDIYSTSS 278 (294)
T ss_dssp HHTCSEEECCC----------------------------CCEEEEECC-CCC------CCCSCSEEECGG
T ss_pred HcCCCEEEECCC-------CHHHHHHHHHHhcccccCCCCeEEEEECC-CCHHHHHHHHHcCCCEEEEec
Confidence 457777765332 235666666666543 266776765 499999999999999999764
No 327
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=55.90 E-value=41 Score=31.11 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=46.7
Q ss_pred HHHHHHhCCCCEEEEeccCCCC---------CcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 106 AAQKAKSDGATRFCMGAAWREL---------KDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~~~---------~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+++.+.+.|++.|.++.++.+. ....+..+.++.+.+++.++++....|..+.+.+..+..+|.+.+.+|
T Consensus 197 ~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 197 ATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp HHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEC
Confidence 3445667899998773221010 012344455555555556889988999999999999999999999876
No 328
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=55.84 E-value=12 Score=37.22 Aligned_cols=67 Identities=13% Similarity=0.061 Sum_probs=43.0
Q ss_pred HHHHHHhCCCeeeccC--CC-CH-----HHHhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHH
Q psy8190 161 AYRLKKVGLDYYNHNL--DT-SP-----KLYGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAEL 227 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~--et-~~-----e~l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~ 227 (348)
|..|++.|++.|.+.. ++ +. .-|..+.+. .+.++..+.++.+|+.|+.|..++++.+ +....-+.+.
T Consensus 66 l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V~NH~~~~~~wf~~~ 142 (669)
T 3k8k_A 66 LDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDYVMNHTGTAHPWFTEA 142 (669)
T ss_dssp HHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEECCSEEETTSHHHHHH
T ss_pred HHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEECcccCCCcCHHHHHH
Confidence 4555555555555531 22 11 112344443 3899999999999999999999999998 6544444444
No 329
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=55.83 E-value=1e+02 Score=26.80 Aligned_cols=44 Identities=9% Similarity=0.024 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHHcCCeee-EeEeeecC-CCHHHHHHHHHHHHhc
Q psy8190 191 DYENRLNTLKNVRNVGINIC-CGGIIGLS-ESRDQRAELIFQLANL 234 (348)
Q Consensus 191 ~~~~~~~~i~~~~~~G~~i~-~~~i~Glg-et~e~~~~~l~~l~~l 234 (348)
+.++.++..+.+.++|..-. +.-.|-.. -+.+.+.++++.+.+-
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (288)
T 2nuw_A 76 NLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI 121 (288)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 45556666666666665321 11111113 4666666666665553
No 330
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=55.75 E-value=28 Score=32.13 Aligned_cols=79 Identities=18% Similarity=0.327 Sum_probs=55.5
Q ss_pred cCHHHHHHHHHHHHh-----CCCCEEEEeccCCCC----------Ccc-cHHHHHHHHHHHHhcCcEEEE--ecCC----
Q psy8190 98 LSIESVITAAQKAKS-----DGATRFCMGAAWREL----------KDR-DLDNIENMICEVKKIGLETCL--TLGM---- 155 (348)
Q Consensus 98 ~~~eei~~~~~~~~~-----~G~~~i~l~gg~~~~----------~~~-~~~~~~~l~~~i~~~~~~i~~--~~g~---- 155 (348)
.+.+.+++.++.+.+ .|+..|.|-.|+... ... -+.-+..+++.+++.|+.+.+ .+|.
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~pg~~tc~ 102 (397)
T 3a5v_A 23 VDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTCG 102 (397)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHHcCCEEEEEecCCCCccC
Confidence 567888888887776 789999887664321 001 112488889999988877543 4442
Q ss_pred -------CCHHHHHHHHHhCCCeeeccC
Q psy8190 156 -------LNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 156 -------l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.....++.+.+.|++.|-+..
T Consensus 103 ~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 130 (397)
T 3a5v_A 103 GHIASLGYEDIDAKTWAKWGIDYLKYDN 130 (397)
T ss_dssp SCBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 345678899999999998754
No 331
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=55.71 E-value=9.9 Score=37.99 Aligned_cols=34 Identities=9% Similarity=0.100 Sum_probs=29.1
Q ss_pred hccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec
Q psy8190 184 GDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL 217 (348)
Q Consensus 184 ~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl 217 (348)
..+.+. .+.++..+.++.||+.|++|..++++.+
T Consensus 98 ~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NH 132 (686)
T 1qho_A 98 KQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVPNH 132 (686)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTE
T ss_pred cccCcccCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 345554 3899999999999999999999999988
No 332
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=55.69 E-value=1.1e+02 Score=27.22 Aligned_cols=71 Identities=20% Similarity=0.199 Sum_probs=39.9
Q ss_pred HHHHHHhCCCCEEEEeccCC-CCCcc-----cHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 106 AAQKAKSDGATRFCMGAAWR-ELKDR-----DLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~-~~~~~-----~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
.++...+.|+..|.+...+. ..++. -.+++.++++.+++. ++.+....+.. ...++.|.+.|++.+++.-.
T Consensus 198 ~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~g~-~~~l~~l~~~g~d~~~~d~~ 276 (353)
T 1j93_A 198 YIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGS-GGLLERLPLTGVDVVSLDWT 276 (353)
T ss_dssp HHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECSSC-TTTGGGGGGGCCSEEECCTT
T ss_pred HHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECCCh-HHHHHHHHhcCCCEEEeCCC
Confidence 33444567998887654321 12221 234566667777754 44432223322 24577888999998876443
No 333
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=55.62 E-value=40 Score=29.94 Aligned_cols=105 Identities=6% Similarity=0.014 Sum_probs=66.9
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCCCHHH---HHHHHHhCCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGMLNENQ---AYRLKKVGLD 170 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l~~e~---l~~Lk~aG~~ 170 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++.+.+. .+++.+..|.-+.+. .+..+++|+|
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gad 108 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGNTGEFY-ALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGAD 108 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcccCChh-hCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCC
Confidence 67888899999999999999877654 4433 45666667777766542 477777777733443 4455567999
Q ss_pred eeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeE
Q psy8190 171 YYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICC 211 (348)
Q Consensus 171 ~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~ 211 (348)
.+.+-.- .|. ..+.+...+-++.+.+ .++++..
T Consensus 109 avlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiil 142 (314)
T 3d0c_A 109 CVMIHQP----VHP----YITDAGAVEYYRNIIEALDAPSII 142 (314)
T ss_dssp EEEECCC----CCS----CCCHHHHHHHHHHHHHHSSSCEEE
T ss_pred EEEECCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEE
Confidence 8875331 111 1255666666666544 4666543
No 334
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=55.61 E-value=14 Score=38.66 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=46.0
Q ss_pred HHHHHHHHhCCCeeeccCCC-CH-H----------------HHh---ccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeee
Q psy8190 159 NQAYRLKKVGLDYYNHNLDT-SP-K----------------LYG---DIIST-RDYENRLNTLKNVRNVGINICCGGIIG 216 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~et-~~-e----------------~l~---~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~G 216 (348)
+.+..|++.|++.|.+..-. ++ + .+. .+.+. .+.++..+.++.+|++||.|..++++.
T Consensus 690 ~kldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDvV~N 769 (1039)
T 3klk_A 690 QNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWVPD 769 (1039)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 56889999999999986433 21 1 111 12222 378999999999999999999999999
Q ss_pred c-CCC
Q psy8190 217 L-SES 220 (348)
Q Consensus 217 l-get 220 (348)
+ .+.
T Consensus 770 Hta~~ 774 (1039)
T 3klk_A 770 QIYNL 774 (1039)
T ss_dssp EECCC
T ss_pred CcCCC
Confidence 8 643
No 335
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=55.50 E-value=75 Score=28.52 Aligned_cols=126 Identities=8% Similarity=-0.059 Sum_probs=67.8
Q ss_pred CCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEe--eec-C---------CCH
Q psy8190 154 GMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGI--IGL-S---------ESR 221 (348)
Q Consensus 154 g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i--~Gl-g---------et~ 221 (348)
+...++.++.|++.|++.|-+.+.. ..+........++..-+.++.|.+.|+.|..++- -|. + ++.
T Consensus 84 g~~~~~di~~ik~~G~N~VRi~~~~--~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~~~ 161 (359)
T 4hty_A 84 KRFSKKHFEVIRSWGANVVRVPVHP--RAWKERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQNNSYHTTK 161 (359)
T ss_dssp TCCSHHHHHHHHHTTCSEEEEEECH--HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESSGGGCCCH
T ss_pred CCcCHHHHHHHHhcCCCEEEEeccH--HHhhccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccCCcchhHH
Confidence 3456788999999999988876532 2221111112345556789999999998765531 121 1 245
Q ss_pred HHHHHHHHHHH-hcCCCCCeeecccccccCCCCCCCCCCCCH----HHHHHHHHHHHHHCCCCcee
Q psy8190 222 DQRAELIFQLA-NLNPYPESVPINNLVQIKGTPLYGSSILDP----LEFIRTIAVARITMPTSRIR 282 (348)
Q Consensus 222 e~~~~~l~~l~-~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~----~~~~~~~a~~R~~lp~~~i~ 282 (348)
+...+.+..+. ++...+..+.+..+. +|...-......+. ....+++...|..-|+..|-
T Consensus 162 ~~~~~~~~~la~ryk~~p~Vi~~el~N-EP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~ 226 (359)
T 4hty_A 162 GETFDFWRRVSERYNGINSVAFYEIFN-EPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIAL 226 (359)
T ss_dssp HHHHHHHHHHHHHTTTCTTEEEEESCS-EECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEEecc-CCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 66666666653 343233333333322 33221111112232 23456777788877775443
No 336
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=55.48 E-value=72 Score=27.44 Aligned_cols=198 Identities=16% Similarity=0.152 Sum_probs=103.2
Q ss_pred CHHHHHHHHHHHHh-C-C--CCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEE----------ecCCCCHHHHHHH
Q psy8190 99 SIESVITAAQKAKS-D-G--ATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL----------TLGMLNENQAYRL 164 (348)
Q Consensus 99 ~~eei~~~~~~~~~-~-G--~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~----------~~g~l~~e~l~~L 164 (348)
+..+..+.++.+.. . . -.++.+. |+... +..+.+.++..++.+.+ ..|.++ ...|
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~~vev~v~-----Pp~~~---L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS---~~mL 82 (252)
T 2btm_A 14 TLAEAVQFVEDVKGHVPPADEVISVVC-----APFLF---LDRLVQAADGTDLKIGAQTMHFADQGAYTGEVS---PVML 82 (252)
T ss_dssp CHHHHHHHHHHHTTTSCCTTTCEEEEE-----ECGGG---HHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCC---HHHH
T ss_pred CHHHHHHHHHHHHhhcccccCeeEEEE-----CcHHH---HHHHHHHhcCCCceEEeccCCCCCCCCcCCcCC---HHHH
Confidence 45666666666542 1 1 1244442 22333 33344444433454443 244555 5678
Q ss_pred HHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHH---------HHHH-HHhc
Q psy8190 165 KKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAE---------LIFQ-LANL 234 (348)
Q Consensus 165 k~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~---------~l~~-l~~l 234 (348)
+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++.. -+.. +..+
T Consensus 83 ~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~vv~~Ql~~~l~~~ 153 (252)
T 2btm_A 83 KDLGVTYVILGH----SERRQMF-AETDETVNKKVLAAFTRGLIP----IICCGESLEEREAGQTNAVVASQVEKALAGL 153 (252)
T ss_dssp HHHTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHHTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHcCCCEEEeCc----hhccccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhCCCHHHHHHHHHHHHHhcC
Confidence 899999999875 2222221 346677777799999999964 3334788775432 2221 1112
Q ss_pred CCCCCee--eccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-------Ccee-ccccccccchhhHHHHHHhC
Q psy8190 235 NPYPESV--PINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT-------SRIR-MSAGRKEMGETTQAFCFLAG 302 (348)
Q Consensus 235 ~~~~~~i--~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-------~~i~-~s~g~~~l~~~~~~~~l~~G 302 (348)
. ++.+ .+-.|-|. =||- ..++++..-++.+..|..+.. ..++ +.+|-.+- .+...+.-..+
T Consensus 154 ~--~~~~~~~vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~d 226 (252)
T 2btm_A 154 T--PEQVKQAVIAYEPIWAIGTG----KSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKP-DNIRDFLAQQQ 226 (252)
T ss_dssp C--HHHHTTCEEEECCGGGTTTS----CCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCT-TTHHHHHTSTT
T ss_pred C--HHHcCCEEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCH-HHHHHHHcCCC
Confidence 2 2110 01122232 2453 457899999999999976431 1244 23333332 23344444688
Q ss_pred cceeeeCCeeccCCCCCchHHHHHHH
Q psy8190 303 ANSIFYGDKLLTTDNTKTNDDSKLLK 328 (348)
Q Consensus 303 An~~~~~~~~~~~~g~~~~~~~~~i~ 328 (348)
+|+++.|.- .-.+++..++++
T Consensus 227 iDG~LVGgA-----sL~a~~F~~Ii~ 247 (252)
T 2btm_A 227 IDGALVGGA-----SLEPASFLQLVE 247 (252)
T ss_dssp CCEEEESGG-----GSSHHHHHHHHH
T ss_pred CCeeEecHH-----HhChHHHHHHHH
Confidence 999876641 122344555554
No 337
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=55.48 E-value=1.1e+02 Score=26.94 Aligned_cols=155 Identities=14% Similarity=0.144 Sum_probs=96.5
Q ss_pred ecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccC-C---CCCHHHHHHHHHHHHH-cCCeeeEeEeeecCCCHHHHHH
Q psy8190 152 TLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDII-S---TRDYENRLNTLKNVRN-VGINICCGGIIGLSESRDQRAE 226 (348)
Q Consensus 152 ~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~-~---~~~~~~~~~~i~~~~~-~G~~i~~~~i~Glget~e~~~~ 226 (348)
-++..+.-..+.+.++|++.+.++= +.--....+ + .-+.++.+..++.+.+ ...++.+++=.|+|.++++..+
T Consensus 21 ~~~a~D~~sA~~~~~aG~~ai~vs~--~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~ 98 (295)
T 1xg4_A 21 IVGTINANHALLAQRAGYQAIYLSG--GGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVAR 98 (295)
T ss_dssp EEECSSHHHHHHHHHTTCSCEEECH--HHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEEEECc--hHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHH
Confidence 4677888889999999999988631 100001122 2 2489999999888765 5678999999998889999999
Q ss_pred HHHHHHhcCCCCCeeecccc-cccCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CCceecccc--c-cccc--hhhHHHH
Q psy8190 227 LIFQLANLNPYPESVPINNL-VQIKGTPLYGSSILDPLEFIRTIAVARITMP--TSRIRMSAG--R-KEMG--ETTQAFC 298 (348)
Q Consensus 227 ~l~~l~~l~~~~~~i~~~~l-~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp--~~~i~~s~g--~-~~l~--~~~~~~~ 298 (348)
+...+.+.+ ...+.+--= .|..-.-+......+.++....+..++..-. +..|..-.. + +.+. -.-....
T Consensus 99 ~v~~l~~aG--a~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay 176 (295)
T 1xg4_A 99 TVKSMIKAG--AAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAY 176 (295)
T ss_dssp HHHHHHHHT--CSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHcC--CeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHH
Confidence 999998887 666655321 1211111222345677777777777777643 323332110 1 0000 1223345
Q ss_pred HHhCcceeeeCC
Q psy8190 299 FLAGANSIFYGD 310 (348)
Q Consensus 299 l~~GAn~~~~~~ 310 (348)
..+||+.++.+.
T Consensus 177 ~eAGAd~i~~e~ 188 (295)
T 1xg4_A 177 VEAGAEMLFPEA 188 (295)
T ss_dssp HHTTCSEEEETT
T ss_pred HHcCCCEEEEeC
Confidence 679999997653
No 338
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.45 E-value=61 Score=25.57 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=47.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcC---cEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIG---LETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~---~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
.+++++++.+ .+.+..-|.++...+ ...+.+.++++.+++.+ +.+.+ .|....+....+++.|+|.+.
T Consensus 56 ~p~e~lv~aa---~~~~~diV~lS~~~~----~~~~~~~~~i~~L~~~g~~~i~v~v-GG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 56 QTPEQVAMAA---VQEDVDVIGVSILNG----AHLHLMKRLMAKLRELGADDIPVVL-GGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp CCHHHHHHHH---HHTTCSEEEEEESSS----CHHHHHHHHHHHHHHTTCTTSCEEE-EECCCHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHH---HhcCCCEEEEEeech----hhHHHHHHHHHHHHhcCCCCCEEEE-eCCCchhcHHHHHHCCCcEEE
Confidence 5788888655 455788887766421 24577888888888754 44433 356677778889999999755
No 339
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=55.32 E-value=1.1e+02 Score=26.87 Aligned_cols=171 Identities=12% Similarity=0.035 Sum_probs=101.9
Q ss_pred ecCCCCHHHHHHHHHhCCCeeeccCCC-CHHHHhccCC-CCCHHHHHHHHHHHHH-cCCeeeEeEeeecCCCHHHHHHHH
Q psy8190 152 TLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIIS-TRDYENRLNTLKNVRN-VGINICCGGIIGLSESRDQRAELI 228 (348)
Q Consensus 152 ~~g~l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~-~~~~~~~~~~i~~~~~-~G~~i~~~~i~Glget~e~~~~~l 228 (348)
-++..+.-..+.+.++|++.+.++=-+ +. .+-.=.. .-+.++.+..++.+.+ ..+++.+++=.|+| +.++..++.
T Consensus 19 ~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~-~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~~~~~v 96 (290)
T 2hjp_A 19 AMAAHNPLVAKLAEQAGFGGIWGSGFELSA-SYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFG-NAVNVHYVV 96 (290)
T ss_dssp EEECSSHHHHHHHHHHTCSEEEECHHHHHH-HTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTS-SHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEEEEChHHHHH-hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHHH
Confidence 467788888999999999999875211 11 1111111 2489999999988776 56788899999977 899999999
Q ss_pred HHHHhcCCCCCeeeccccc-ccCCCCCC--CCCCCCHHHHHHHHHHHHHHC--CCCceec--ccccc--ccc--hhhHHH
Q psy8190 229 FQLANLNPYPESVPINNLV-QIKGTPLY--GSSILDPLEFIRTIAVARITM--PTSRIRM--SAGRK--EMG--ETTQAF 297 (348)
Q Consensus 229 ~~l~~l~~~~~~i~~~~l~-P~~gT~l~--~~~~~~~~~~~~~~a~~R~~l--p~~~i~~--s~g~~--~l~--~~~~~~ 297 (348)
..+.+.+ ...+.+--=. |..-.-+. .....+.++....+..++... ++..|.. ...+. .+. -.-...
T Consensus 97 ~~l~~aG--a~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~a 174 (290)
T 2hjp_A 97 PQYEAAG--ASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQA 174 (290)
T ss_dssp HHHHHHT--CSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHH
T ss_pred HHHHHhC--CeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHH
Confidence 9998887 6666542111 21111122 334567778888888887764 3333321 11000 011 112233
Q ss_pred HHHhCcceeeeCCeeccCCCCCchHHHHHHHHcC
Q psy8190 298 CFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKLG 331 (348)
Q Consensus 298 ~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i~~~G 331 (348)
...+||+.++.+.++ ++.++..++.++..
T Consensus 175 y~eAGAd~i~~e~~~-----~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 175 YEEAGADAILIHSRQ-----KTPDEILAFVKSWP 203 (290)
T ss_dssp HHHTTCSEEEECCCC-----SSSHHHHHHHHHCC
T ss_pred HHHcCCcEEEeCCCC-----CCHHHHHHHHHHcC
Confidence 456899999765422 22345555555554
No 340
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=55.19 E-value=68 Score=28.00 Aligned_cols=105 Identities=7% Similarity=0.011 Sum_probs=66.5
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCC-CHHHHH---HHHHhCC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI--GLETCLTLGML-NENQAY---RLKKVGL 169 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l-~~e~l~---~Lk~aG~ 169 (348)
..+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++...+. + +.+..|.. +.+.++ ...++|+
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Ga 92 (288)
T 2nuw_A 16 KVNVDALKTHAKNLLEKGIDAIFVNGTTGLGP-ALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDI 92 (288)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEETSTTTTGG-GSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCC
Confidence 367888999999999999999887664 3433 46777888888888763 5 65666654 344444 4455699
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeE
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICC 211 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~ 211 (348)
|.+.+-.- .|.+ ..+.+...+-++.+.+ .++++..
T Consensus 93 davlv~~P----~y~~---~~s~~~l~~~f~~va~a~~lPiil 128 (288)
T 2nuw_A 93 LGVSSHSP----YYFP---RLPEKFLAKYYEEIARISSHSLYI 128 (288)
T ss_dssp SEEEECCC----CSSC---SCCHHHHHHHHHHHHHHCCSCEEE
T ss_pred CEEEEcCC----cCCC---CCCHHHHHHHHHHHHHhcCCCEEE
Confidence 98875331 1111 0255666666655444 4555433
No 341
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=55.15 E-value=1e+02 Score=26.47 Aligned_cols=134 Identities=14% Similarity=0.152 Sum_probs=77.7
Q ss_pred HHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHH---------HHHHH-
Q psy8190 161 AYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRA---------ELIFQ- 230 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~---------~~l~~- 230 (348)
...|+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++. .-++.
T Consensus 81 ~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~vv~~Ql~~~ 151 (251)
T 2vxn_A 81 MPILKDIGVHWVILGH----SERRTYY-GETDEIVAQKVSEACKQGFMV----IACIGETLQQREANQTAKVVLSQTSAI 151 (251)
T ss_dssp HHHHHHTTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhCCCHHHHHHHHHHHH
Confidence 5678999999999875 2222221 346777788899999999964 333478877652 22222
Q ss_pred HHhcCCCCCee--eccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-------Ccee-ccccccccchhhHHHH
Q psy8190 231 LANLNPYPESV--PINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT-------SRIR-MSAGRKEMGETTQAFC 298 (348)
Q Consensus 231 l~~l~~~~~~i--~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-------~~i~-~s~g~~~l~~~~~~~~ 298 (348)
+..+. .+.. .+-.|-|. =||- ..+++++.-++.+..|..+.. ..++ +.+|-.+- .+...++
T Consensus 152 l~~~~--~~~~~~~vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~ 224 (251)
T 2vxn_A 152 AAKLT--KDAWNQVVLAYEPVWAIGTG----KVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNA-ANAATLY 224 (251)
T ss_dssp HTTCC--TGGGGGEEEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCT-TTHHHHH
T ss_pred HhcCC--HHHhCCEEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCH-hHHHHHh
Confidence 22222 1110 11122232 2443 457899999999999965432 1233 23333332 3445566
Q ss_pred HHhCcceeeeCC
Q psy8190 299 FLAGANSIFYGD 310 (348)
Q Consensus 299 l~~GAn~~~~~~ 310 (348)
...++|+++.|.
T Consensus 225 ~~~diDG~LVGg 236 (251)
T 2vxn_A 225 AKPDINGFLVGG 236 (251)
T ss_dssp TSTTCCEEEESG
T ss_pred cCCCCCeeeecH
Confidence 678999987765
No 342
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=55.14 E-value=82 Score=28.14 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=49.4
Q ss_pred HHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC--------------CCHHHHHHHH-HhCCCe
Q psy8190 107 AQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM--------------LNENQAYRLK-KVGLDY 171 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~--------------l~~e~l~~Lk-~aG~~~ 171 (348)
++.+.+.|+++|-|-|+ ..|...+.+...++++..+..|+.+....|. .++++...+. +-|+|.
T Consensus 91 i~~ai~~GFtSVMiDgS-~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~ 169 (323)
T 2isw_A 91 VKMAIDLGFSSVMIDAS-HHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDA 169 (323)
T ss_dssp HHHHHHTTCSEEEECCT-TSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSE
T ss_pred HHHHHHcCCCeEEecCC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCE
Confidence 34556779999988776 3333345566666777777778877665442 2344444444 579998
Q ss_pred eeccCCCCHHHHh
Q psy8190 172 YNHNLDTSPKLYG 184 (348)
Q Consensus 172 i~~g~et~~e~l~ 184 (348)
+-+++.|+--.|+
T Consensus 170 LAvaiGt~HG~Yk 182 (323)
T 2isw_A 170 LAVAIGTSHGAYK 182 (323)
T ss_dssp EEECSSCCSSSBC
T ss_pred EEEecCccccccC
Confidence 8888887544444
No 343
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=55.02 E-value=1e+02 Score=26.46 Aligned_cols=160 Identities=9% Similarity=0.145 Sum_probs=91.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEE--EEe----cC--CCCHHH-HHHHH-
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLET--CLT----LG--MLNENQ-AYRLK- 165 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i--~~~----~g--~l~~e~-l~~Lk- 165 (348)
.+.++++++++.+...|++-|-+=-... ....+.+.+.+.+..+++. ++++ ++. .| ..+++. +..++
T Consensus 29 ~t~~e~l~~a~~~~~~~aD~vElR~D~l-~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~ 107 (258)
T 4h3d_A 29 KNKKDIIKEAKELKDACLDIIEWRVDFF-ENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKE 107 (258)
T ss_dssp SSHHHHHHHHHHHTTSSCSEEEEEGGGC-TTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeeccc-cccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHHH
Confidence 5789999999988888877664422211 1123568888888888863 3443 332 33 344443 33333
Q ss_pred --HhC-CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCC--HHHHHHHHHHHHhcCCCCCe
Q psy8190 166 --KVG-LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSES--RDQRAELIFQLANLNPYPES 240 (348)
Q Consensus 166 --~aG-~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget--~e~~~~~l~~l~~l~~~~~~ 240 (348)
+.| ++.+-+-+...+ +.+.+.++.+++.|.++-... .-+..| .+++...+..+.+++ .|.
T Consensus 108 ~~~~~~~d~iDvEl~~~~------------~~~~~l~~~a~~~~~kiI~S~-Hdf~~TP~~~el~~~~~~~~~~g--aDI 172 (258)
T 4h3d_A 108 ISNTGLVDLIDVELFMGD------------EVIDEVVNFAHKKEVKVIISN-HDFNKTPKKEEIVSRLCRMQELG--ADL 172 (258)
T ss_dssp HHHTTCCSEEEEEGGGCH------------HHHHHHHHHHHHTTCEEEEEE-EESSCCCCHHHHHHHHHHHHHTT--CSE
T ss_pred HHhcCCchhhHHhhhccH------------HHHHHHHHHHHhCCCEEEEEE-ecCCCCCCHHHHHHHHHHHHHhC--CCE
Confidence 345 666654332222 233345667788887653221 223333 478888898899888 776
Q ss_pred eecccccccCCCCCCCCCCCCHHHHHHHHHHHHHH---CCC-Cceeccc
Q psy8190 241 VPINNLVQIKGTPLYGSSILDPLEFIRTIAVARIT---MPT-SRIRMSA 285 (348)
Q Consensus 241 i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~---lp~-~~i~~s~ 285 (348)
+.+-. . +-+.++.++++...+.+ .++ ..|-++.
T Consensus 173 vKia~-~-----------~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~M 209 (258)
T 4h3d_A 173 PKIAV-M-----------PQNEKDVLVLLEATNEMFKIYADRPIITMSM 209 (258)
T ss_dssp EEEEE-C-----------CSSHHHHHHHHHHHHHHHHHTCSSCBEEEEC
T ss_pred EEEEE-c-----------cCCHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 65432 1 12566777777665543 444 2444443
No 344
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=54.93 E-value=91 Score=25.90 Aligned_cols=138 Identities=15% Similarity=0.180 Sum_probs=0.0
Q ss_pred HHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCe
Q psy8190 161 AYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPES 240 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~ 240 (348)
++.++++|++.+.++. --|...+++..+.++.+++.|+.+ |+=.+++.+. ..+.+++ ...
T Consensus 75 ~~~~~~~Gad~Vll~~---------ser~l~~~e~~~~~~~a~~~Gl~~----iv~v~~~~e~-----~~~~~~~--~~~ 134 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINH---------SEKRMLLADIEAVINKCKNLGLET----IVCTNNINTS-----KAVAALS--PDC 134 (219)
T ss_dssp HHHHHHHTCCEEEESB---------TTBCCBHHHHHHHHHHHHHHTCEE----EEEESSSHHH-----HHHTTTC--CSE
T ss_pred HHHHHHcCCCEEEECC---------ccccCCHHHHHHHHHHHHHCCCeE----EEEeCCchHH-----HHHHhCC--CCE
Q ss_pred eecccccccCCCCCCCC---CCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCC
Q psy8190 241 VPINNLVQIKGTPLYGS---SILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDN 317 (348)
Q Consensus 241 i~~~~l~P~~gT~l~~~---~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g 317 (348)
+.+.+..... | - ...+++....+....|.+..+..+-+..|-.. ++........|||.++.|.-+.....
T Consensus 135 i~~~~~~~iG-t----G~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~--~~~~~~~~~~gaDgvlVGsAi~~~~d 207 (219)
T 2h6r_A 135 IAVEPPELIG-T----GIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISK--GEDVKAALDLGAEGVLLASGVVKAKN 207 (219)
T ss_dssp EEECCCC-------------------CSHHHHHHHHHHCTTCEEEECSSCCS--HHHHHHHHTTTCCCEEESHHHHTCSS
T ss_pred EEEEeccccc-c----CCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCc--HHHHHHHhhCCCCEEEEcHHHhCccc
Q ss_pred CCchHHHHHHHHc
Q psy8190 318 TKTNDDSKLLKKL 330 (348)
Q Consensus 318 ~~~~~~~~~i~~~ 330 (348)
..+.++++
T Consensus 208 -----~~~~~~~l 215 (219)
T 2h6r_A 208 -----VEEAIREL 215 (219)
T ss_dssp -----HHHHHHHH
T ss_pred -----HHHHHHHH
No 345
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=54.80 E-value=30 Score=30.05 Aligned_cols=109 Identities=9% Similarity=0.028 Sum_probs=48.0
Q ss_pred cCHHHHHHHHHHHHhCCCCE-EEEeccCCCCCcccHHHHHHHHHHHHhcCcE-EEEecCCCCHHHHHHHHHhCCCeee-c
Q psy8190 98 LSIESVITAAQKAKSDGATR-FCMGAAWRELKDRDLDNIENMICEVKKIGLE-TCLTLGMLNENQAYRLKKVGLDYYN-H 174 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~-i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~-i~~~~g~l~~e~l~~Lk~aG~~~i~-~ 174 (348)
.+.+|++..++...+ |.+. +.+.+-+.. +..+.+...+-..++-+.|.. +.+.-|.--.+.++.+.++|+..+. +
T Consensus 60 vtldemi~h~~aV~r-~~~~~~vvaD~pfg-sy~~~~~a~~~a~rl~kaGa~aVklEgg~e~~~~I~al~~agipV~gHi 137 (264)
T 1m3u_A 60 VTVADIAYHTAAVRR-GAPNCLLLADLPFM-AYATPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHL 137 (264)
T ss_dssp CCHHHHHHHHHHHHH-HCTTSEEEEECCTT-SSSSHHHHHHHHHHHHHTTCSEEECCCSGGGHHHHHHHHHTTCCEEEEE
T ss_pred cCHHHHHHHHHHHHh-hCCCCcEEEECCCC-CcCCHHHHHHHHHHHHHcCCCEEEECCcHHHHHHHHHHHHCCCCeEeee
Confidence 556666665554433 2332 222221111 111344444433333333332 3333333334566666666655432 2
Q ss_pred cC--CCCH--HHHhccCCC-CCHHHHHHHHHHHHHcCCe
Q psy8190 175 NL--DTSP--KLYGDIIST-RDYENRLNTLKNVRNVGIN 208 (348)
Q Consensus 175 g~--et~~--e~l~~i~~~-~~~~~~~~~i~~~~~~G~~ 208 (348)
|+ |+.. .-|+...+. ...++.++-.+.+.++|-.
T Consensus 138 GLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~ 176 (264)
T 1m3u_A 138 GLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQ 176 (264)
T ss_dssp ESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCc
Confidence 32 2210 112333332 1346778888888888864
No 346
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=54.72 E-value=35 Score=29.32 Aligned_cols=64 Identities=13% Similarity=-0.010 Sum_probs=41.7
Q ss_pred HhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 111 KSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 111 ~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+.|...+-+..-+......+++.+.++.+.+... ++.+.+..|.-+.+.+..+++ |++.+.+|
T Consensus 171 ~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVG 236 (254)
T 1vc4_A 171 LEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIG 236 (254)
T ss_dssp HHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEEC
T ss_pred HHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEe
Confidence 34455555443321112234556677777776542 566767788888999999999 99999875
No 347
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=54.72 E-value=1.1e+02 Score=26.65 Aligned_cols=115 Identities=14% Similarity=0.121 Sum_probs=83.1
Q ss_pred EEecCCCCHHHHHHHHHhCCCeeeccCCC-CHHHHhccC-C---CCCHHHHHHHHHHHHH-cCCeeeEeEeeecCCCHHH
Q psy8190 150 CLTLGMLNENQAYRLKKVGLDYYNHNLDT-SPKLYGDII-S---TRDYENRLNTLKNVRN-VGINICCGGIIGLSESRDQ 223 (348)
Q Consensus 150 ~~~~g~l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~-~---~~~~~~~~~~i~~~~~-~G~~i~~~~i~Glget~e~ 223 (348)
.+-++..+.-..+.+.++|++-+.++=.+ +. . .+ + .-+.++.+..++.+.+ ..+++..++=.|+|.++++
T Consensus 18 i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~-~---~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~ 93 (275)
T 2ze3_A 18 FLLPNAWDVASARLLEAAGFTAIGTTSAGIAH-A---RGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPED 93 (275)
T ss_dssp EEECEESSHHHHHHHHHHTCSCEEECHHHHHH-H---SCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHH
T ss_pred eeEecccCHHHHHHHHHcCCCEEEECcHHHHH-h---CCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHH
Confidence 34577788888999999999999875211 21 1 22 2 2489999999888765 5678999999998889999
Q ss_pred HHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8190 224 RAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARIT 275 (348)
Q Consensus 224 ~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~ 275 (348)
..++...+.+.+ ...+.+-==...+ .....+.++....+..++..
T Consensus 94 ~~~~v~~l~~aG--aagv~iED~~~~~-----~k~l~~~~e~~~~I~aa~~a 138 (275)
T 2ze3_A 94 VRRTVEHFAALG--VAGVNLEDATGLT-----PTELYDLDSQLRRIEAARAA 138 (275)
T ss_dssp HHHHHHHHHHTT--CSEEEEECBCSSS-----SSCBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CcEEEECCCcCCC-----CCccCCHHHHHHHHHHHHHh
Confidence 999999998887 6666542211112 23557888888888877766
No 348
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=54.66 E-value=15 Score=37.68 Aligned_cols=62 Identities=10% Similarity=0.085 Sum_probs=46.3
Q ss_pred HHHHHHHHhCCCeeeccC--CCC-HH---------H-----HhccC----C-CCCHHHHHHHHHHHHHcCCeeeEeEeee
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DTS-PK---------L-----YGDII----S-TRDYENRLNTLKNVRNVGINICCGGIIG 216 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et~-~e---------~-----l~~i~----~-~~~~~~~~~~i~~~~~~G~~i~~~~i~G 216 (348)
+.+..|++.|++.|.+.. ++. .. - |-.+. + -.+.++..+.++.+|++||.|..++++.
T Consensus 637 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~V~N 716 (844)
T 3aie_A 637 KNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWVPD 716 (844)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 578899999999999863 221 11 1 11232 2 2378999999999999999999999999
Q ss_pred c-CCC
Q psy8190 217 L-SES 220 (348)
Q Consensus 217 l-get 220 (348)
+ ++.
T Consensus 717 H~~~~ 721 (844)
T 3aie_A 717 QMYAL 721 (844)
T ss_dssp EECCC
T ss_pred cccCC
Confidence 8 643
No 349
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=54.64 E-value=49 Score=29.15 Aligned_cols=78 Identities=10% Similarity=-0.061 Sum_probs=53.5
Q ss_pred cCHHHHHHHHHHHHhCC-CCEEEEeccC-----CC-----C-----------C-cccHHHHHHHHHHHHh-c-CcEEEEe
Q psy8190 98 LSIESVITAAQKAKSDG-ATRFCMGAAW-----RE-----L-----------K-DRDLDNIENMICEVKK-I-GLETCLT 152 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G-~~~i~l~gg~-----~~-----~-----------~-~~~~~~~~~l~~~i~~-~-~~~i~~~ 152 (348)
.+.+++.+.++.+.+.| +..|.+.+.. .+ + + ......-.+.++.+++ . ++++..+
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~ 250 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGC 250 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEE
Confidence 35667777788888889 8887665421 00 0 0 0012234567777766 4 7899989
Q ss_pred cCCCCHHHHHHHHHhCCCeeecc
Q psy8190 153 LGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 153 ~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.|..+.+.+..+..+|.+.|.++
T Consensus 251 GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 251 GGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp SSCCSHHHHHHHHHHTCSSEEEC
T ss_pred CCCCCHHHHHHHHHcCCCEEEEc
Confidence 99999988888889999988765
No 350
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=54.32 E-value=1.3e+02 Score=27.42 Aligned_cols=162 Identities=14% Similarity=0.144 Sum_probs=81.9
Q ss_pred cHHHHHHHHHHHHhcCcEEEEecCC-CCHHHHHHHHHhCCCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHHHHH-cCC
Q psy8190 131 DLDNIENMICEVKKIGLETCLTLGM-LNENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRN-VGI 207 (348)
Q Consensus 131 ~~~~~~~l~~~i~~~~~~i~~~~g~-l~~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~ 207 (348)
+.+.+.++++++++.++.+.++.+. ...+..+.+.++|++.+.+.... ..+ ...+..+ |.+ ++++++ .++
T Consensus 140 d~~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~---~~~~~~~---~~~-i~~l~~~~~~ 212 (393)
T 2qr6_A 140 DTELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAE---HVNTGGE---ALN-LKEFIGSLDV 212 (393)
T ss_dssp CHHHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSS---CCCC--------C-HHHHHHHCSS
T ss_pred CHHHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccc---cCCCccc---HHH-HHHHHHhcCC
Confidence 4567778888888777666555442 34566778888999987653211 011 1111112 223 334433 455
Q ss_pred eeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHC---C-C-Ccee
Q psy8190 208 NICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITM---P-T-SRIR 282 (348)
Q Consensus 208 ~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~l---p-~-~~i~ 282 (348)
++.. |-..|.++ ...+.+.+ ++.|.+.. -+..+..+.....++...+.++....+.++ . + ..|-
T Consensus 213 pvi~----ggi~t~e~----a~~~~~~G--ad~i~vg~-Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvi 281 (393)
T 2qr6_A 213 PVIA----GGVNDYTT----ALHMMRTG--AVGIIVGG-GENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHII 281 (393)
T ss_dssp CEEE----ECCCSHHH----HHHHHTTT--CSEEEESC-CSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEE
T ss_pred CEEE----CCcCCHHH----HHHHHHcC--CCEEEECC-CcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEE
Confidence 5433 54556665 44555677 78877732 111111122222344444444444433332 2 1 3344
Q ss_pred ccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 283 MSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 283 ~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
+++|-.+ ......++.+||+.++.|..+
T Consensus 282 a~GGI~~--~~dv~kalalGA~~V~iG~~~ 309 (393)
T 2qr6_A 282 ADGSIEN--SGDVVKAIACGADAVVLGSPL 309 (393)
T ss_dssp ECSSCCS--HHHHHHHHHHTCSEEEECGGG
T ss_pred EECCCCC--HHHHHHHHHcCCCEEEECHHH
Confidence 4554322 233455778899999777543
No 351
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=54.29 E-value=12 Score=37.01 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=44.8
Q ss_pred HHHHHHHHhCCCeeeccC--CCC----HHH-----HhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCC
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DTS----PKL-----YGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SES 220 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et~----~e~-----l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get 220 (348)
+.+..|++.|++.|.+.. ++. ..- |..+.+. .+.++..+.++.+|+.|+.|..++++.+ +..
T Consensus 117 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~NH~s~~ 191 (628)
T 1g5a_A 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHTSNE 191 (628)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEECCSEEETT
T ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEEecCccccc
Confidence 356788888888887742 211 112 2244443 3899999999999999999999999999 544
No 352
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=54.22 E-value=14 Score=31.23 Aligned_cols=65 Identities=12% Similarity=0.108 Sum_probs=41.6
Q ss_pred HHHHHhCCCCEE--EEeccCC-C--CCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRF--CMGAAWR-E--LKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i--~l~gg~~-~--~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+..+.+.|++.| .+.|... + ....+. ++++.+++.++++.+..|.-+.+.+..+.++|++.+-+|
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~----~~i~~~~~~~ipvia~GGI~s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSRQEAGPDV----ALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSCCSSSCCH----HHHHHHHHTTCCEEEESCCCSHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHcCCCEEeeeccccCCCCcCCCCCCH----HHHHHHHhCCCCEEEECCCCCHHHHHHHHHCCCCEEEEc
Confidence 445567788887 4443211 0 011233 334444433678888888888999999999999998875
No 353
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=54.11 E-value=1.2e+02 Score=26.88 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=59.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc-c---c----HHHHHHHHHHHHhc-C--cEEEE--ec----CCCCH-H
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKD-R---D----LDNIENMICEVKKI-G--LETCL--TL----GMLNE-N 159 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~-~---~----~~~~~~l~~~i~~~-~--~~i~~--~~----g~l~~-e 159 (348)
.+.+++.+.+..+...|++.|+...|+. |.. . + .++-.++++.+++. + +.+.+ .| ..-+. .
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~-p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~ 161 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDP-PRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEA 161 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCC-STTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHH
Confidence 6788999998888899999987666632 211 0 1 23455666656553 2 44443 33 23333 2
Q ss_pred HHHHHH---HhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCe
Q psy8190 160 QAYRLK---KVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGIN 208 (348)
Q Consensus 160 ~l~~Lk---~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~ 208 (348)
.++.|+ ++|.+.+-- | .-.+.+...+.++.+++.|+.
T Consensus 162 d~~~Lk~Kv~aGAdf~iT--Q----------~ffD~~~~~~f~~~~r~~Gi~ 201 (310)
T 3apt_A 162 DLRHFKAKVEAGLDFAIT--Q----------LFFNNAHYFGFLERARRAGIG 201 (310)
T ss_dssp HHHHHHHHHHHHCSEEEE--C----------CCSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCEEEe--c----------ccCCHHHHHHHHHHHHHcCCC
Confidence 444443 579886541 1 124677777888888888864
No 354
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=54.10 E-value=31 Score=31.59 Aligned_cols=28 Identities=29% Similarity=0.347 Sum_probs=15.5
Q ss_pred CCCCHHHHHHhhcCChHHHHHHHHHHHHhhcC
Q psy8190 27 LIWKLDEVINLFNLPFNDLLFRAQKVHRKYFD 58 (348)
Q Consensus 27 ~~ls~~e~~~Ll~~~~~~l~~~A~~~~~~~~~ 58 (348)
+.+|.+|+..+. .+...+|....+.-|+
T Consensus 154 ~~mt~~eI~~~i----~~f~~aA~~a~~aGfD 181 (377)
T 2r14_A 154 RALETDEIPGIV----EDYRQAAQRAKRAGFD 181 (377)
T ss_dssp EECCGGGHHHHH----HHHHHHHHHHHHHTCS
T ss_pred ccCCHHHHHHHH----HHHHHHHHHHHHcCCC
Confidence 346666666552 3445556555555563
No 355
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=54.09 E-value=30 Score=30.64 Aligned_cols=16 Identities=19% Similarity=-0.037 Sum_probs=8.9
Q ss_pred HHHHHHhCCCeeeccC
Q psy8190 161 AYRLKKVGLDYYNHNL 176 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~ 176 (348)
.+.|.+.|+.+++++.
T Consensus 225 ~~eL~~lGv~~v~~~~ 240 (298)
T 3eoo_A 225 LDELKGANVDIALYCC 240 (298)
T ss_dssp HHHHHHTTCCEEEECS
T ss_pred HHHHHHcCCeEEEEch
Confidence 4455555666665544
No 356
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=54.06 E-value=55 Score=30.98 Aligned_cols=68 Identities=10% Similarity=0.043 Sum_probs=46.5
Q ss_pred HHHHhCCCCEEEEeccCCCC---------CcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 108 QKAKSDGATRFCMGAAWREL---------KDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 108 ~~~~~~G~~~i~l~gg~~~~---------~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+.+.+.|++.|.+++++.+. .......+.++.+..+..++++.++.|..+.+.+.....+|++.+.+|
T Consensus 293 ~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 293 EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 45567899998875432110 012334445554445445789999999999999999999999999875
No 357
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=54.00 E-value=57 Score=30.33 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=55.4
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCC-------------CC-cccHHHHHHHHHHHHh-c--CcEEEEecCCCCHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRE-------------LK-DRDLDNIENMICEVKK-I--GLETCLTLGMLNENQ 160 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~-------------~~-~~~~~~~~~l~~~i~~-~--~~~i~~~~g~l~~e~ 160 (348)
.+.+++.+.++.+.+.|+..|.+...... .+ ......-.+++..+++ . .+++..+.|..+.+.
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eD 359 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 359 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHH
Confidence 34568888888888999999877653110 00 0113445677777776 3 588888999999999
Q ss_pred HHHHHHhCCCeeecc
Q psy8190 161 AYRLKKVGLDYYNHN 175 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g 175 (348)
+..+..+|.+.|.++
T Consensus 360 a~e~l~aGAd~VqIg 374 (415)
T 3i65_A 360 ALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHTEEEEEES
T ss_pred HHHHHHcCCCEEEEc
Confidence 888888999988764
No 358
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=53.60 E-value=36 Score=29.72 Aligned_cols=110 Identities=13% Similarity=0.025 Sum_probs=52.8
Q ss_pred cCHHHHHHHHHHHHhCCCCE-EEEeccCCCCCcccHHHHHHHHHHHHhcCc-EEEEecCCCCHHHHHHHHHhCCCeee-c
Q psy8190 98 LSIESVITAAQKAKSDGATR-FCMGAAWRELKDRDLDNIENMICEVKKIGL-ETCLTLGMLNENQAYRLKKVGLDYYN-H 174 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~-i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~-~i~~~~g~l~~e~l~~Lk~aG~~~i~-~ 174 (348)
.+.+|++..++...+ |.+. +.+.+-+...+..+.+...+-..++-+.|. -+.+.-|.--.+.++.+.++|+..+. +
T Consensus 60 vTldemi~h~~aV~r-~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg~e~~~~I~al~~agIpV~gHi 138 (275)
T 1o66_A 60 VSLRDMCYHTECVAR-GAKNAMIVSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHI 138 (275)
T ss_dssp CCHHHHHHHHHHHHH-HCSSSEEEEECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECSGGGHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHh-hCCCCeEEEECCCCCccCCHHHHHHHHHHHHHcCCcEEEECCcHHHHHHHHHHHHcCCCeEeee
Confidence 677777777665543 3332 222221111111234554444444443443 23444554445777777788775442 2
Q ss_pred c--CCC-C-HHHHhccCCCCCHHHHHHHHHHHHHcCCe
Q psy8190 175 N--LDT-S-PKLYGDIISTRDYENRLNTLKNVRNVGIN 208 (348)
Q Consensus 175 g--~et-~-~e~l~~i~~~~~~~~~~~~i~~~~~~G~~ 208 (348)
| .|+ . ..-|+...+....++.++-.+.+.++|-.
T Consensus 139 GLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~ 176 (275)
T 1o66_A 139 GLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAA 176 (275)
T ss_dssp ESCGGGTTC-----------CHHHHHHHHHHHHHTTCS
T ss_pred ccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCc
Confidence 3 344 2 22354454444567888888888888864
No 359
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=53.47 E-value=86 Score=27.41 Aligned_cols=108 Identities=7% Similarity=-0.023 Sum_probs=69.0
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc--CcEEEEecCC-CCHHHHHHHHH---hCC
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI--GLETCLTLGM-LNENQAYRLKK---VGL 169 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~-l~~e~l~~Lk~---aG~ 169 (348)
..+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++...+. + +.+..|. -+.+.++..+. +|+
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Ga 92 (293)
T 1w3i_A 16 RIDKEKLKIHAENLIRKGIDKLFVNGTTGLGP-SLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDI 92 (293)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCC
Confidence 367888999999999999999888664 3433 46777888888887763 5 6566665 44555555444 599
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEe
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGI 214 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i 214 (348)
|.+.+-.- .|.+ ..+.+...+-++.+.+ .++++..+-+
T Consensus 93 davlv~~P----~y~~---~~s~~~l~~~f~~va~a~~lPiilYn~ 131 (293)
T 1w3i_A 93 VGIASYAP----YYYP---RMSEKHLVKYFKTLCEVSPHPVYLYNY 131 (293)
T ss_dssp SEEEEECC----CSCS---SCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CEEEEcCC----CCCC---CCCHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 98875321 1111 0255666666666544 4666554443
No 360
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=53.38 E-value=44 Score=30.64 Aligned_cols=28 Identities=21% Similarity=0.121 Sum_probs=17.5
Q ss_pred CCCCHHHHH-HhhcCChHHHHHHHHHHH-HhhcC
Q psy8190 27 LIWKLDEVI-NLFNLPFNDLLFRAQKVH-RKYFD 58 (348)
Q Consensus 27 ~~ls~~e~~-~Ll~~~~~~l~~~A~~~~-~~~~~ 58 (348)
+.||.+|+. .+. .+...+|.... +.-|+
T Consensus 161 r~lt~~eI~~~~i----~~f~~AA~~a~~~aGfD 190 (379)
T 3aty_A 161 EELTDDEVRDGII----PLFVEGAKNAIFKAGFD 190 (379)
T ss_dssp EECCHHHHHHTHH----HHHHHHHHHHHHTSCCS
T ss_pred ccCCHHHHhHHHH----HHHHHHHHHHHHhcCCC
Confidence 458888887 662 44556666665 55563
No 361
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=53.33 E-value=16 Score=33.85 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=41.5
Q ss_pred CHHHHHHHHHhCCCeeeccCCCCHHHHh--ccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeee
Q psy8190 157 NENQAYRLKKVGLDYYNHNLDTSPKLYG--DIIST-RDYENRLNTLKNVRNVGINICCGGIIG 216 (348)
Q Consensus 157 ~~e~l~~Lk~aG~~~i~~g~et~~e~l~--~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~G 216 (348)
..+.++.|+++|++.|-+.+=..+.--. -...+ .+.+..+..++.++++|++|..++-|+
T Consensus 50 ~~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHys 112 (399)
T 1ur4_A 50 KQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYS 112 (399)
T ss_dssp BCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cchHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 3467999999999998864311111000 01112 478999999999999999998887663
No 362
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=53.22 E-value=27 Score=31.01 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=15.3
Q ss_pred HHHHHHHHHh---cCcEEEEecCCCCHHHHHHHHHh
Q psy8190 135 IENMICEVKK---IGLETCLTLGMLNENQAYRLKKV 167 (348)
Q Consensus 135 ~~~l~~~i~~---~~~~i~~~~g~l~~e~l~~Lk~a 167 (348)
+.+.+++.+. .|.....-+|..+.+.++.+.++
T Consensus 169 ldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~ 204 (302)
T 3fa4_A 169 YEESVARLRAARDAGADVGFLEGITSREMARQVIQD 204 (302)
T ss_dssp HHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHH
Confidence 4444444443 24433334455555555555544
No 363
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=53.10 E-value=11 Score=37.06 Aligned_cols=59 Identities=10% Similarity=0.101 Sum_probs=43.0
Q ss_pred HHHHHHHHhCCCeeeccCC--C-CHH--HHh-----ccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec
Q psy8190 159 NQAYRLKKVGLDYYNHNLD--T-SPK--LYG-----DIIST-RDYENRLNTLKNVRNVGINICCGGIIGL 217 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~e--t-~~e--~l~-----~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl 217 (348)
+.|..|++.|++.|.+..= + ... -|. .+.+. .+.++..+.++.+|+.|+.|..++++.+
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH 217 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNH 217 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred HHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 5678889999999887521 2 111 122 23332 3789999999999999999999999887
No 364
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=53.07 E-value=41 Score=29.47 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=49.3
Q ss_pred HHHHHHHHHhCCCCEEEEeccC-------CCC-----------C-cccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHH
Q psy8190 103 VITAAQKAKSDGATRFCMGAAW-------REL-----------K-DRDLDNIENMICEVKK-IGLETCLTLGMLNENQAY 162 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~-------~~~-----------~-~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~ 162 (348)
+.+.++.+.+.|++.|.++++. .+. + ........++++.+++ .++++.++.|..+.+.+.
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~ 257 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVL 257 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 3444566778899999886521 000 0 0112234577777776 378888888888999999
Q ss_pred HHHHhCCCeeecc
Q psy8190 163 RLKKVGLDYYNHN 175 (348)
Q Consensus 163 ~Lk~aG~~~i~~g 175 (348)
.+.++|++.+.+|
T Consensus 258 ~~l~~GAd~V~vg 270 (311)
T 1ep3_A 258 EMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHTCSEEEEC
T ss_pred HHHHcCCCEEEEC
Confidence 9999999998875
No 365
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=53.05 E-value=1.1e+02 Score=26.48 Aligned_cols=139 Identities=13% Similarity=0.108 Sum_probs=77.3
Q ss_pred cCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHH--HH--
Q psy8190 153 LGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAE--LI-- 228 (348)
Q Consensus 153 ~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~--~l-- 228 (348)
.|.++ ...|+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++.. +.
T Consensus 100 TGEIS---a~MLkd~G~~~VIiGH----SERR~~f-gEtde~V~~K~~~Al~~GL~p----IlCVGEtleeReag~t~~v 167 (272)
T 4g1k_A 100 TGEVA---AGMVAEFGAAYAIVGH----SERRAYH-GESNETVAAKARRALAAGLTP----IVCVGETLAEREAGTTEQV 167 (272)
T ss_dssp TTCCC---HHHHHTTTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHH
T ss_pred cCcCC---HHHHHHcCCCEEEECc----hhccccc-CCCHHHHHHHHHHHHHCCCeE----EEEeCCCHHHHhCCCHHHH
Confidence 45555 5678999999999875 2222221 346677778889999999964 3334788876531 11
Q ss_pred --HHHHh-cCCCCC-----eeeccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC---Ccee-ccccccccchhh
Q psy8190 229 --FQLAN-LNPYPE-----SVPINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT---SRIR-MSAGRKEMGETT 294 (348)
Q Consensus 229 --~~l~~-l~~~~~-----~i~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~---~~i~-~s~g~~~l~~~~ 294 (348)
..+.. +.. .+ .+ +-.|-|. =|| -..+++++.-.+.+..|..+.. ..++ +.+|..+- .+.
T Consensus 168 v~~Ql~~~l~~-~~~~~~~~v-VIAYEPVWAIGT----G~tAt~e~aqevh~~IR~~l~~~~a~~~rIlYGGSV~~-~N~ 240 (272)
T 4g1k_A 168 VGAQLDAVLAV-LSPDEAARI-VVAYEPVWAIGT----GKSATAEQAQQVHAFLRGRLAAKGAGHVSLLYGGSVKA-DNA 240 (272)
T ss_dssp HHHHHHHHHTT-SCHHHHTTC-EEEECCGGGSSS----SCCCCHHHHHHHHHHHHHHHHHHTCTTSCEEECSCCCT-TTH
T ss_pred HHHHHHHHHhC-CCHHHcCCE-EEEECcHhhccC----CCCCCHHHHHHHHHHHHHHHHHhhcCCceEEEcCCcCH-hHH
Confidence 11111 110 11 11 1122221 244 3457899999999998876642 2333 23444432 233
Q ss_pred HHHHHHhCcceeeeCC
Q psy8190 295 QAFCFLAGANSIFYGD 310 (348)
Q Consensus 295 ~~~~l~~GAn~~~~~~ 310 (348)
..+.-....|+++.|.
T Consensus 241 ~el~~~~dIDG~LVGg 256 (272)
T 4g1k_A 241 AELFGQPDIDGGLIGG 256 (272)
T ss_dssp HHHHTSTTCCEEEECG
T ss_pred HHHhcCCCCCEEEech
Confidence 3344446788887664
No 366
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=52.96 E-value=1.2e+02 Score=26.82 Aligned_cols=134 Identities=16% Similarity=0.188 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCC
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPY 237 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~ 237 (348)
+...+.+..+|.+.+.+.+...++.+. .+..++..+++.++.+++.++++.+-. +|.|.+.++ ...+.+.+
T Consensus 135 ~~~~~a~~~~~~~a~~i~~n~~~~~~~--~~~~~~~~~~~~i~~vr~~~~Pv~vK~-v~~g~~~e~----a~~~~~~G-- 205 (332)
T 1vcf_A 135 DDLLRLVEMLEADALAFHVNPLQEAVQ--RGDTDFRGLVERLAELLPLPFPVMVKE-VGHGLSREA----ALALRDLP-- 205 (332)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHHT--TSCCCCTTHHHHHHHHCSCSSCEEEEC-SSSCCCHHH----HHHHTTSC--
T ss_pred HHHHHHHhhcCCCceeeccchHHHHhc--CCCccHHHHHHHHHHHHcCCCCEEEEe-cCCCCCHHH----HHHHHHcC--
Q ss_pred CCeeecccccccCCC--------CC---------CCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHH
Q psy8190 238 PESVPINNLVQIKGT--------PL---------YGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFL 300 (348)
Q Consensus 238 ~~~i~~~~l~P~~gT--------~l---------~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~ 300 (348)
++.|.+... .|| .- .+..+++ +..+...+..+++..|-+++|-.+ ......++.
T Consensus 206 ~d~I~vs~~---ggt~~~~~~~~r~~~~~~~~~~~~~g~~~----~~~l~~v~~~~~~ipvia~GGI~~--~~d~~kal~ 276 (332)
T 1vcf_A 206 LAAVDVAGA---GGTSWARVEEWVRFGEVRHPELCEIGIPT----ARAILEVREVLPHLPLVASGGVYT--GTDGAKALA 276 (332)
T ss_dssp CSEEECCCB---TSCCHHHHHHTC--------CCTTCSCBH----HHHHHHHHHHCSSSCEEEESSCCS--HHHHHHHHH
T ss_pred CCEEEeCCC---CCCcchhHHHhhccccchhhhHhhccccH----HHHHHHHHHhcCCCeEEEECCCCC--HHHHHHHHH
Q ss_pred hCcceeeeC
Q psy8190 301 AGANSIFYG 309 (348)
Q Consensus 301 ~GAn~~~~~ 309 (348)
.||+.++.|
T Consensus 277 ~GAd~V~ig 285 (332)
T 1vcf_A 277 LGADLLAVA 285 (332)
T ss_dssp HTCSEEEEC
T ss_pred hCCChHhhh
No 367
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=52.94 E-value=1.2e+02 Score=26.88 Aligned_cols=154 Identities=14% Similarity=0.110 Sum_probs=95.1
Q ss_pred ecCCCCHHHHHHHHHhCCCeeeccC-CCCHHHHhccCC-CCCHHHHHHHHHHHHH-c-CCeeeEeEeeecCCCHHHHHHH
Q psy8190 152 TLGMLNENQAYRLKKVGLDYYNHNL-DTSPKLYGDIIS-TRDYENRLNTLKNVRN-V-GINICCGGIIGLSESRDQRAEL 227 (348)
Q Consensus 152 ~~g~l~~e~l~~Lk~aG~~~i~~g~-et~~e~l~~i~~-~~~~~~~~~~i~~~~~-~-G~~i~~~~i~Glget~e~~~~~ 227 (348)
-++..+.-..+.+.++|++.+.++= ..+...+-.=.. .-+.++.+..++.+.+ . .+++..++=.|+| +.++..++
T Consensus 43 ~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg-~~~~v~~t 121 (318)
T 1zlp_A 43 MPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG-GPLNVQRF 121 (318)
T ss_dssp EEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-SHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-CHHHHHHH
Confidence 4667788888999999999998642 111112211111 2489999999988776 4 6899999999987 89999999
Q ss_pred HHHHHhcCCCCCeeecc--cccccCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCCceecccc--c-cccc--hhhHHHH
Q psy8190 228 IFQLANLNPYPESVPIN--NLVQIKGTPLYGSSILDPLEFIRTIAVARITM--PTSRIRMSAG--R-KEMG--ETTQAFC 298 (348)
Q Consensus 228 l~~l~~l~~~~~~i~~~--~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~l--p~~~i~~s~g--~-~~l~--~~~~~~~ 298 (348)
...+.+.+ ...+.+- ...|.-| -+...+..+.++....+..++... ++..|..-.. . ..+. -.-....
T Consensus 122 v~~l~~aG--aagv~iED~~~~k~cg-H~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay 198 (318)
T 1zlp_A 122 IRELISAG--AKGVFLEDQVWPKKCG-HMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLY 198 (318)
T ss_dssp HHHHHHTT--CCEEEEECBCSSCCCS-SSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcC--CcEEEECCCCCCcccc-CCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHH
Confidence 99998887 6666542 1222111 122334567777777777777654 3333332110 0 0000 1122334
Q ss_pred HHhCcceeeeC
Q psy8190 299 FLAGANSIFYG 309 (348)
Q Consensus 299 l~~GAn~~~~~ 309 (348)
..+||+.++.+
T Consensus 199 ~eAGAd~i~~e 209 (318)
T 1zlp_A 199 KEAGADATFVE 209 (318)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEc
Confidence 67999999764
No 368
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=52.93 E-value=60 Score=30.67 Aligned_cols=74 Identities=12% Similarity=0.162 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCc--EEEEe--cCCCCHHHHHHHHHhCCCeee
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGL--ETCLT--LGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~--~i~~~--~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
+++.+++.++.+.+.|+..|+|.+... ...+..+.++++.+++ .++ .++++ .|.-..-.+. -.++|++.|.
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G---~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~la-Av~AGa~~VD 231 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAG---ILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLK-AIEAGVDRVD 231 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTS---CCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHH-HHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCC---CcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHH-HHHhCCCEEE
Confidence 456666666666666766666654210 1234555666666654 222 23332 2222222222 2356777665
Q ss_pred ccC
Q psy8190 174 HNL 176 (348)
Q Consensus 174 ~g~ 176 (348)
..+
T Consensus 232 ~ti 234 (464)
T 2nx9_A 232 TAI 234 (464)
T ss_dssp EBC
T ss_pred Eec
Confidence 444
No 369
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=52.76 E-value=1.4e+02 Score=27.34 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=49.6
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC
Q psy8190 103 VITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et 178 (348)
..+.++.+.+.|+..|.+..+.. +.+.+.++++.+++. ++.+.+ .+..+.+.++.+.++|+|.|.++.+.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g-----~~~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~Gad~I~vg~~~ 225 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHG-----HSTRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLISVGADCLKVGIGP 225 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC-----SSHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTTTCSEEEECSSC
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC-----ChHHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhcCCCEEEECCCC
Confidence 34555666778999887743211 125678888888874 677765 33567899999999999999886554
No 370
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=52.60 E-value=1e+02 Score=25.88 Aligned_cols=97 Identities=10% Similarity=0.095 Sum_probs=61.6
Q ss_pred cHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHH-HHHHHHcCCee
Q psy8190 131 DLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNT-LKNVRNVGINI 209 (348)
Q Consensus 131 ~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~-i~~~~~~G~~i 209 (348)
+.+.+.+.++.+++.|+.+.+.-=......+..|....++.|-+.- ...+.+.........+++ +..+++.|+.+
T Consensus 137 ~~~~~~~~l~~l~~~G~~ialDdfG~g~ssl~~L~~l~~d~iKiD~----~~v~~~~~~~~~~~~~~~i~~~a~~~g~~v 212 (259)
T 3s83_A 137 DPERAAVILKTLRDAGAGLALDDFGTGFSSLSYLTRLPFDTLKIDR----YFVRTMGNNAGSAKIVRSVVKLGQDLDLEV 212 (259)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECC---CHHHHHHHHSCCCEEEECH----HHHHHTTTCHHHHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCchhHHHHHhCCCCEEEECH----HHHhhhhcCchHHHHHHHHHHHHHHCCCeE
Confidence 4567788888888889988775322334567888888888887643 444445433333344444 56778889877
Q ss_pred eEeEeeecCCCHHHHHHHHHHHHhcCCCCCee
Q psy8190 210 CCGGIIGLSESRDQRAELIFQLANLNPYPESV 241 (348)
Q Consensus 210 ~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i 241 (348)
.+.. -||.++ +..+++++ .+.+
T Consensus 213 iaeG----VEt~~~----~~~l~~lG--~~~~ 234 (259)
T 3s83_A 213 VAEG----VENAEM----AHALQSLG--CDYG 234 (259)
T ss_dssp EECC----CCSHHH----HHHHHHHT--CCEE
T ss_pred EEEe----CCCHHH----HHHHHhcC--CCEe
Confidence 5553 266654 46678887 5554
No 371
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=52.36 E-value=40 Score=29.67 Aligned_cols=220 Identities=10% Similarity=0.027 Sum_probs=109.0
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEE-EEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLET-CLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i-~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
..+++++++..+ ..|+...+++... ....+-+++.+.++.-...-.-+ .+.+. .+.+.++++.+.|+..|-+.
T Consensus 53 ~~~~e~l~~~m~---~~GI~~~Vlvq~~--~~~~dN~~ll~~l~~~~~r~~Gva~vdp~-~~~~eL~~l~~~G~rGvR~~ 126 (303)
T 4d9a_A 53 DAGPDMLFALRD---HLGFARNVIVQAS--CHGTDNAATLDAIARAQGKARGIAVVDPA-IDEAELAALHEGGMRGIRFN 126 (303)
T ss_dssp CBCHHHHHHHHH---HHTCSEEEEECCG--GGTTCCHHHHHHHHHTTTSEEEEECCCTT-CCHHHHHHHHHTTEEEEEEE
T ss_pred CCCHHHHHHHHH---HcCCCeEEEeccc--cccccHHHHHHHHHhCCCcEEEEEEeCCC-CCHHHHHHHHHCCCCEEEee
Confidence 367888876654 5588885554431 11223356666554332211111 23343 35788999999999988876
Q ss_pred CCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCC
Q psy8190 176 LDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLY 255 (348)
Q Consensus 176 ~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~ 255 (348)
+...+ ...-+...+...++.+.+ |+.+...+ +. ....+ ....+++++ ...|--+. |.|..
T Consensus 127 ~~~~~------~~~~~~~~~~~~~~~l~~-gl~v~l~~--~~-~~l~~---l~~~~~~~~--~~iVidH~-----G~p~~ 186 (303)
T 4d9a_A 127 FLKRL------VDDAPKDKFLEVAGRLPA-GWHVVIYF--EA-DILEE---LRPFMDAIP--VPIVIDHM-----GRPDV 186 (303)
T ss_dssp CCTTT------CSCCCHHHHHHHHTSCCT-TCEEEEEC--CG-GGHHH---HHHHHHHCS--SCEEEGGG-----GCCCG
T ss_pred cccCC------ccccCHHHHHHHHHHHhc-CCEEEEec--cc-ccHHH---HHHHHHHCC--CcEEEeCC-----CCCCc
Confidence 64321 112356778888888888 98876652 22 23333 344444443 22222111 22211
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCceecccc-ccc-----cc--hhhHHHHHHhCcceeeeCCe-eccCCCC---CchHH
Q psy8190 256 GSSILDPLEFIRTIAVARITMPTSRIRMSAG-RKE-----MG--ETTQAFCFLAGANSIFYGDK-LLTTDNT---KTNDD 323 (348)
Q Consensus 256 ~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g-~~~-----l~--~~~~~~~l~~GAn~~~~~~~-~~~~~g~---~~~~~ 323 (348)
... ........++..++ ..||..+.+|+. +.. .. .......+.++++.+|.|.. ..+.... ...+.
T Consensus 187 ~~g-~~~~~~~~~~~l~~-~~~NV~vKlSg~~~~~~~~~~~~~~~~~~~~~~~~~~dRlmfGSDwP~~~~~~~~~~~~~~ 264 (303)
T 4d9a_A 187 RQG-PDGADMKAFRRLLD-SREDIWFKATCPDRLDPAGPPWDDFARSVAPLVADYADRVIWGTAWPHPNMQDAIPDDGLV 264 (303)
T ss_dssp GGC-TTSHHHHHHHHHHH-HCTTEEEECCCHHHHCTTCTTCHHHHHHHHHHHHHTTTSEECCCCTTCTTCTTSCCCHHHH
T ss_pred ccC-CCCHHHHHHHHHHh-hCCCEEEEeeCceecCCCCCCHHHHHHHHHHHHHhCcccEEEecCCCCcccccCCCCHHHH
Confidence 111 11122334444443 358887777642 111 00 11223456667888877653 2222222 22345
Q ss_pred HHHHHHcCCCchhhhhHHhhh
Q psy8190 324 SKLLKKLGINTRNIKIKMKNN 344 (348)
Q Consensus 324 ~~~i~~~G~~p~~~~~~~~~~ 344 (348)
.+.+.+.--.+.+|..-+-.|
T Consensus 265 ~~~~~~~~~~~~~~~~il~~N 285 (303)
T 4d9a_A 265 VDMIPRIAPTPELQHKMLVTN 285 (303)
T ss_dssp HHTHHHHSCSHHHHHHHHTHH
T ss_pred HHHHHHHCCCHHHHHHHHHHH
Confidence 666655422344343333333
No 372
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=52.10 E-value=1.5e+02 Score=27.50 Aligned_cols=194 Identities=14% Similarity=0.061 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHh-c-------CcEEEEecCCCC------HHHH---HHHHHhCCCeeeccCCC-CHHHHhccCCCCCHH
Q psy8190 132 LDNIENMICEVKK-I-------GLETCLTLGMLN------ENQA---YRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYE 193 (348)
Q Consensus 132 ~~~~~~l~~~i~~-~-------~~~i~~~~g~l~------~e~l---~~Lk~aG~~~i~~g~et-~~e~l~~i~~~~~~~ 193 (348)
.+.+.+-++..++ . ...+.+|.|--. +|.+ +.+.++ +|.+.+++-+ ...-+..+.......
T Consensus 159 ~d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~ 237 (415)
T 3i65_A 159 CDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLK 237 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHH
T ss_pred HHHHHHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHH
Confidence 4555555554432 1 234666765332 2332 333333 7888888876 433222222222344
Q ss_pred HHHHHHHHHHH-----c-------------CCe-eeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccC-C--
Q psy8190 194 NRLNTLKNVRN-----V-------------GIN-ICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIK-G-- 251 (348)
Q Consensus 194 ~~~~~i~~~~~-----~-------------G~~-i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~-g-- 251 (348)
+++++++...+ . ..+ +. +=+..+.+.+++.+..+.+.+.+ .+.|.+..-.... +
T Consensus 238 ~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~--VKi~pd~~~~~i~~iA~~a~~aG--aDgIiv~Ntt~~r~dl~ 313 (415)
T 3i65_A 238 NIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVF--VKLAPDLNQEQKKEIADVLLETN--IDGMIISNTTTQINDIK 313 (415)
T ss_dssp HHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEE--EEECSCCCHHHHHHHHHHHHHHT--CSEEEECCCBSCCCCCG
T ss_pred HHHHHHHHHHHhhcccccccccccccccCCCCCeEE--EEecCCCCHHHHHHHHHHHHHcC--CcEEEEeCCCccccccc
Confidence 44555444321 0 123 22 22334667788899999999998 8887765433210 0
Q ss_pred C---CCCCC-CCCCHHHHHHHHHHHHHHCC-CCceeccccccccchhhHHHHHHhCcceeeeCCeeccCCCCCc-----h
Q psy8190 252 T---PLYGS-SILDPLEFIRTIAVARITMP-TSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKLLTTDNTKT-----N 321 (348)
Q Consensus 252 T---~l~~~-~~~~~~~~~~~~a~~R~~lp-~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~~~-----~ 321 (348)
+ ..... .++.....++++...+..++ +..|-..+|-.+ .+.....+.+||+.++.+--+. ..|+.. +
T Consensus 314 ~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s--~eDa~e~l~aGAd~VqIgra~l-~~GP~~~~~i~~ 390 (415)
T 3i65_A 314 SFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFS--GLDALEKIEAGASVCQLYSCLV-FNGMKSAVQIKR 390 (415)
T ss_dssp GGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCS--HHHHHHHHHHTEEEEEESHHHH-HHGGGHHHHHHH
T ss_pred ccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCC--HHHHHHHHHcCCCEEEEcHHHH-hcCHHHHHHHHH
Confidence 0 00000 11222345666766666665 333433443222 3445667889999987653221 123331 4
Q ss_pred HHHHHHHHcCCC
Q psy8190 322 DDSKLLKKLGIN 333 (348)
Q Consensus 322 ~~~~~i~~~G~~ 333 (348)
++.+.+.+.|+.
T Consensus 391 ~L~~~l~~~G~~ 402 (415)
T 3i65_A 391 ELNHLLYQRGYY 402 (415)
T ss_dssp HHHHHHHHTTCS
T ss_pred HHHHHHHHcCCC
Confidence 556778888886
No 373
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=52.07 E-value=1e+02 Score=25.72 Aligned_cols=115 Identities=10% Similarity=-0.007 Sum_probs=69.4
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCC---------CCcccHHHHHHHHHHHHhcCcEEEEe-cC-CCC----HHHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRE---------LKDRDLDNIENMICEVKKIGLETCLT-LG-MLN----ENQAY 162 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~---------~~~~~~~~~~~l~~~i~~~~~~i~~~-~g-~l~----~e~l~ 162 (348)
.+.++.++ .+.+.|++.|-+...... +...+.+.+.++-+.+++.++.+... +. ... ...++
T Consensus 22 ~~~~~~l~---~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~ 98 (262)
T 3p6l_A 22 FPLTEALD---KTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFK 98 (262)
T ss_dssp SCHHHHHH---HHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHH
T ss_pred CCHHHHHH---HHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHH
Confidence 45666554 456779999877643100 12234567777878888888876532 21 112 24566
Q ss_pred HHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec--CCCHHHHHHHHH
Q psy8190 163 RLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL--SESRDQRAELIF 229 (348)
Q Consensus 163 ~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl--get~e~~~~~l~ 229 (348)
..++.|+..|.+.. .. +.+.+..+.+++.|+.+...-.-+. ..|.+++.+.++
T Consensus 99 ~A~~lGa~~v~~~~--~~------------~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~ 153 (262)
T 3p6l_A 99 FAKAMDLEFITCEP--AL------------SDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAIS 153 (262)
T ss_dssp HHHHTTCSEEEECC--CG------------GGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHT
T ss_pred HHHHcCCCEEEecC--CH------------HHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHH
Confidence 66777999888642 11 2344566778889998876655543 346666655543
No 374
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=52.04 E-value=8.3 Score=38.55 Aligned_cols=34 Identities=6% Similarity=-0.075 Sum_probs=29.2
Q ss_pred hccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec
Q psy8190 184 GDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL 217 (348)
Q Consensus 184 ~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl 217 (348)
..+.+. .+.++..+.++.||+.||+|..++++.+
T Consensus 106 ~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NH 140 (686)
T 1d3c_A 106 KKTNPAYGTIADFQNLIAAAHAKNIKVIIDFAPNH 140 (686)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTE
T ss_pred cccCcccCCHHHHHHHHHHHHHCCCEEEEEeCcCc
Confidence 345554 3899999999999999999999999988
No 375
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=51.77 E-value=17 Score=37.99 Aligned_cols=62 Identities=10% Similarity=0.144 Sum_probs=46.1
Q ss_pred HHHHHHHHhCCCeeeccCCC-CH-H--H--------Hh-----c----cCCC-CCHHHHHHHHHHHHHcCCeeeEeEeee
Q psy8190 159 NQAYRLKKVGLDYYNHNLDT-SP-K--L--------YG-----D----IIST-RDYENRLNTLKNVRNVGINICCGGIIG 216 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~et-~~-e--~--------l~-----~----i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~G 216 (348)
+.+..|++.|++.|.+..-. ++ . . |. . +.+. .+.++..+.++.+|++||.|..++++.
T Consensus 857 ~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDvV~N 936 (1108)
T 3ttq_A 857 KNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVVDN 936 (1108)
T ss_dssp HTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 56889999999999986432 21 1 0 11 0 2332 378999999999999999999999999
Q ss_pred c-CCC
Q psy8190 217 L-SES 220 (348)
Q Consensus 217 l-get 220 (348)
+ .+.
T Consensus 937 Hta~~ 941 (1108)
T 3ttq_A 937 QVYNL 941 (1108)
T ss_dssp EECCC
T ss_pred cccCC
Confidence 8 644
No 376
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=51.59 E-value=78 Score=28.83 Aligned_cols=69 Identities=10% Similarity=0.050 Sum_probs=45.6
Q ss_pred HHHHHhCCCCEEEEeccC-CCCC--------cccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAAW-RELK--------DRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~-~~~~--------~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.++.+. .... ......+.++.+..+..++++....|..+.+.+.....+|.+.+-+|
T Consensus 163 A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 163 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp HHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 344556799988874221 1100 11234445544444456889988889989999999999999999876
No 377
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=51.44 E-value=96 Score=32.98 Aligned_cols=77 Identities=12% Similarity=0.043 Sum_probs=51.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-Cc--EEEEecC-CCCHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-GL--ETCLTLG-MLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-~~--~i~~~~g-~l~~e~l~~Lk~aG~~~i~ 173 (348)
.+++.+++.++.+.+.|+..|+|.+... ...+..+.++++.+++. ++ .+|++.. -+.-...-.-.++|++.+.
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G---~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD 765 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAG---LLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVDIID 765 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTC---CCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccC---CCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhCCCEEE
Confidence 5788899999999999999999976411 23456788888888863 43 4444332 2223333344468999988
Q ss_pred ccCC
Q psy8190 174 HNLD 177 (348)
Q Consensus 174 ~g~e 177 (348)
..+-
T Consensus 766 ~ai~ 769 (1150)
T 3hbl_A 766 TAVA 769 (1150)
T ss_dssp EBCG
T ss_pred Eecc
Confidence 6553
No 378
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=51.28 E-value=57 Score=26.64 Aligned_cols=100 Identities=15% Similarity=0.102 Sum_probs=58.9
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHH
Q psy8190 104 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKL 182 (348)
Q Consensus 104 ~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~ 182 (348)
.+.++.+...|...+++.+-+.++...... .+.++.+.. .+.++.+..|.-+.+.+..+.++|++.+-+|- .+
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~~g~~--~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~----a~ 206 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTKSGYD--TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAAS----VF 206 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCCSCCC--HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESH----HH
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCcccccc--HHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhH----HH
Confidence 333344555678888776621222222222 556666665 36788878888888888888889999876542 22
Q ss_pred HhccCCCCCHHHHHHHHHHHHHcCCeeeEeEee
Q psy8190 183 YGDIISTRDYENRLNTLKNVRNVGINICCGGII 215 (348)
Q Consensus 183 l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~ 215 (348)
+ ....++.+..+ .+++.|+.+...++.
T Consensus 207 ~---~~~~~~~~~~~---~l~~~~~~~~~~~~~ 233 (237)
T 3cwo_X 207 H---FREIDVRELKE---YLKKHGVNVRLEGLL 233 (237)
T ss_dssp H---TTSSCHHHHHH---HHHTTTCCCCEEEEE
T ss_pred H---cCCCCHHHHHH---HHHHCCCceehhhhh
Confidence 2 22345555544 455678765555443
No 379
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=51.27 E-value=50 Score=28.96 Aligned_cols=111 Identities=12% Similarity=0.030 Sum_probs=70.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. ++.+ ..+.+.-.++++.+.+. .+++.+..|.. +.+. .+...++|+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGTTGESP-TLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCC
Confidence 67888899999999999999877654 4433 45666667777766542 46666666654 3444 444556799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
|.+.+-.- .|. ..+.+...+-++.+.+ .++++..+-+-+.
T Consensus 97 davlv~~P----~y~----~~s~~~l~~~f~~ia~a~~lPiilYn~P~~ 137 (292)
T 2vc6_A 97 DGVLIVSP----YYN----KPTQEGIYQHFKAIDAASTIPIIVYNIPGR 137 (292)
T ss_dssp SEEEEECC----CSS----CCCHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred CEEEEcCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEEEeCccc
Confidence 98875331 111 1266777777766554 5777665554443
No 380
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=51.23 E-value=1.2e+02 Score=25.97 Aligned_cols=135 Identities=16% Similarity=0.100 Sum_probs=79.3
Q ss_pred ccCHHHHHHHHHHHHhC--CCCEE--EEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCee
Q psy8190 97 ILSIESVITAAQKAKSD--GATRF--CMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYY 172 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~--G~~~i--~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i 172 (348)
.++.+++...++...+. ++..+ ++++.. ..+.+-+..+++.+++.++-+-=+...-..-..+.-++.|+-.+
T Consensus 79 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~----T~~~~~m~~vm~~l~~~gL~fvDS~Ts~~S~a~~~A~~~gvp~~ 154 (245)
T 2nly_A 79 NLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKI----VENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPYA 154 (245)
T ss_dssp TCCHHHHHHHHHHHHHHSTTCCEEEEEECTTG----GGCHHHHHHHHHHHHHTTCEEEECCCCSSCSHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccch----hcCHHHHHHHHHHHHHCCCEEEcCCCCcccHHHHHHHHcCCCeE
Confidence 47899999998887653 56665 454432 23556788888888888765532221111112233457788765
Q ss_pred e--ccCCCCHHHHhccCCCCCH----HHHHHHHHHHHHcCCeeeEeEeeec-C-C---CHHHHHHHHHHHHhcCCCCCee
Q psy8190 173 N--HNLDTSPKLYGDIISTRDY----ENRLNTLKNVRNVGINICCGGIIGL-S-E---SRDQRAELIFQLANLNPYPESV 241 (348)
Q Consensus 173 ~--~g~et~~e~l~~i~~~~~~----~~~~~~i~~~~~~G~~i~~~~i~Gl-g-e---t~e~~~~~l~~l~~l~~~~~~i 241 (348)
. +-++.. ..+. .+..++...|++.|.-| .+|+ . + |.+-+.+.+..+.+-+ +..+
T Consensus 155 ~rdvFLD~~---------~~~~~~I~~ql~~a~~~A~~~G~aI----aIGhp~p~~~~Ti~aL~~~~~~l~~~g--i~LV 219 (245)
T 2nly_A 155 TRSIFLDNT---------HSSRKEVIKNMRKLAKKAKQGSEPI----GIGHVGVRGDETYAGIRSMLDEFQAES--IQLV 219 (245)
T ss_dssp ECCEESCCT---------TCCHHHHHHHHHHHHHHHHTTSCCE----EEEECSTTHHHHHHHHGGGHHHHHHTT--EEEC
T ss_pred EeeEECCCC---------CCCHHHHHHHHHHHHHHHhhcCcEE----EEECCCCCchhHHHHHHHHhhHHhhCC--EEEE
Confidence 5 222220 1222 24455666777787655 5666 3 4 6666666666666666 7788
Q ss_pred ecccccccC
Q psy8190 242 PINNLVQIK 250 (348)
Q Consensus 242 ~~~~l~P~~ 250 (348)
+++.+...+
T Consensus 220 pvS~l~~~~ 228 (245)
T 2nly_A 220 PVSQLLPSP 228 (245)
T ss_dssp CGGGGCC--
T ss_pred EHHHHhhcc
Confidence 888877544
No 381
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=50.99 E-value=45 Score=29.20 Aligned_cols=23 Identities=13% Similarity=0.060 Sum_probs=12.7
Q ss_pred cEEEEecCCCCHHHHHHHHHhCC
Q psy8190 147 LETCLTLGMLNENQAYRLKKVGL 169 (348)
Q Consensus 147 ~~i~~~~g~l~~e~l~~Lk~aG~ 169 (348)
+.+-++.|..+.+.+..|.++|.
T Consensus 226 vgVKaaGGIrt~e~al~~i~aga 248 (281)
T 2a4a_A 226 IGLKVSGGISDLNTASHYILLAR 248 (281)
T ss_dssp CEEEEESSCCSHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCHHHHHHHHHHhh
Confidence 44555556556655555555543
No 382
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=50.93 E-value=45 Score=29.77 Aligned_cols=65 Identities=9% Similarity=0.081 Sum_probs=43.0
Q ss_pred HHHHHhCCCCEEEEec---cCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGA---AWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~g---g~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.+.| |+......++ +++..+++ .++++.+..|.-+.+.+..+..+|.+.+.+|
T Consensus 137 a~~a~~~GaD~i~v~g~~~GG~~G~~~~~----~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 137 ARMVERAGADAVIAEGMESGGHIGEVTTF----VLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSCHH----HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHcCCCEEEEECCCCCccCCCccHH----HHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCEEEec
Confidence 3445677999988865 2211111223 44444443 4688888888888988888888999998875
No 383
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=50.92 E-value=40 Score=31.20 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc-CcEEEEe--cCCCCHHHHHHHHHhCCCeeeccCCC
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI-GLETCLT--LGMLNENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~-~~~i~~~--~g~l~~e~l~~Lk~aG~~~i~~g~et 178 (348)
.+....+.+...|++.+...+..+.+.....+.+....+..+.. .+.+... ...-..+.++.+.+.|+..+.+++..
T Consensus 78 ~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~l~~ 157 (448)
T 3hm7_A 78 GFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGNIDHLQDLHDGGVIGFKAFMSE 157 (448)
T ss_dssp CSHHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTCGGGHHHHHHTTCSEEEEESSS
T ss_pred HHHHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccCHHHHHHHHHcCCCEEEEeecc
Confidence 33444556677899998776512334344566666666666542 2343332 22223566788888999888876643
Q ss_pred CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe
Q psy8190 179 SPKLYGDIISTRDYENRLNTLKNVRNVGINICCG 212 (348)
Q Consensus 179 ~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~ 212 (348)
... .-.+..+.+...+.++.+++.|+.+.++
T Consensus 158 ~~~---~~~~~~~~~~l~~~l~~a~~~g~~v~vH 188 (448)
T 3hm7_A 158 CGT---DDFQFSHDETLLKGMKKIAALGSILAVH 188 (448)
T ss_dssp CSS---SSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred ccC---CccCcCCHHHHHHHHHHHHhcCCEEEEE
Confidence 100 0012337788889999999999887666
No 384
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=50.86 E-value=52 Score=29.62 Aligned_cols=116 Identities=8% Similarity=-0.007 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcE-EEE--ecCCCCHHHH----HHHHHhCCCeee
Q psy8190 101 ESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE-TCL--TLGMLNENQA----YRLKKVGLDYYN 173 (348)
Q Consensus 101 eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~-i~~--~~g~l~~e~l----~~Lk~aG~~~i~ 173 (348)
+++...++.+++.|..-++.... .+..+.+++.++++.+.+.|+. +++ +.|..+++.+ +.+++.--..+.
T Consensus 120 ~~~~~~i~~ak~~G~~v~~~~~~---a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~p 196 (345)
T 1nvm_A 120 DVSKQHIEYARNLGMDTVGFLMM---SHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQ 196 (345)
T ss_dssp GGGHHHHHHHHHHTCEEEEEEES---TTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSE
T ss_pred HHHHHHHHHHHHCCCEEEEEEEe---CCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCce
Confidence 45555555666667654332211 1234667888888888876543 222 4666666543 344443111233
Q ss_pred ccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCC-----CHHHHHHHHH
Q psy8190 174 HNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSE-----SRDQRAELIF 229 (348)
Q Consensus 174 ~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glge-----t~e~~~~~l~ 229 (348)
+++ |...+..--+.....+-++|....-+-+.|+|+ ..|+++..+.
T Consensus 197 i~~----------H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~ 247 (345)
T 1nvm_A 197 VGM----------HAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEVFIAVAE 247 (345)
T ss_dssp EEE----------ECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHH
T ss_pred EEE----------EECCCccHHHHHHHHHHHcCCCEEEecchhccCCccCcCHHHHHHHHH
Confidence 322 111122233333444455787544344777754 2355555544
No 385
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=50.81 E-value=1e+02 Score=26.43 Aligned_cols=41 Identities=17% Similarity=0.281 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 134 NIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 134 ~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+.++++++++. +.++.+-.|..+++.++.+.+ +.|.+-+|
T Consensus 186 ~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVG 227 (252)
T 3tha_A 186 ILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEEC
T ss_pred HHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEEC
Confidence 455666666653 555666666666666666654 36665543
No 386
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=50.71 E-value=8.2 Score=38.53 Aligned_cols=35 Identities=6% Similarity=-0.036 Sum_probs=29.7
Q ss_pred HhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec
Q psy8190 183 YGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL 217 (348)
Q Consensus 183 l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl 217 (348)
|..+.+. .+.++..+.++.||+.|++|..++++.+
T Consensus 101 y~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~V~NH 136 (680)
T 1cyg_A 101 FKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNH 136 (680)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTE
T ss_pred ccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3455554 3899999999999999999999999988
No 387
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei}
Probab=50.62 E-value=34 Score=32.47 Aligned_cols=57 Identities=11% Similarity=0.171 Sum_probs=42.2
Q ss_pred CHHHHHHHHHhCCCeeeccCCCCHHHHhccC--CCCC---HHHHHHHHHHHHHcCCeeeEeEe
Q psy8190 157 NENQAYRLKKVGLDYYNHNLDTSPKLYGDII--STRD---YENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 157 ~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~--~~~~---~~~~~~~i~~~~~~G~~i~~~~i 214 (348)
-+|.++.|+++|++.+.+++ +=.+++..=. ...+ ++-.-+.++.+++.|+.+.+++.
T Consensus 64 y~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~ 125 (473)
T 3ahy_A 64 TAEDIALLKSLGAKSYRFSI-SWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLF 125 (473)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEccc-cHHhhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 46899999999999999988 3145554321 1224 77778899999999998776653
No 388
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A*
Probab=50.49 E-value=27 Score=32.93 Aligned_cols=55 Identities=11% Similarity=0.104 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCH---HHHHHHHHHHHHcCCeeeEeEe
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDY---ENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~---~~~~~~i~~~~~~G~~i~~~~i 214 (348)
+|.++.|+++|++.+.+++ +=.+++.. ....+. +-.-+.++.+++.|+.+.+++.
T Consensus 70 ~eDi~lm~~~G~~~~R~si-sWsRi~P~-~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~ 127 (454)
T 2o9p_A 70 KEDVQLMKQLGFLHYRFSV-AWPRIMPA-AGIINEEGLLFYEHLLDEIELAGLIPMLTLY 127 (454)
T ss_dssp HHHHHHHHTTTCCEEEEEC-CHHHHCSS-TTCCCHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHhcCCceEEecc-cHHhhCCC-CCCcCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 5889999999999999887 31455554 112344 5677889999999998777653
No 389
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=50.45 E-value=13 Score=36.82 Aligned_cols=62 Identities=15% Similarity=0.351 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCCeeeccC--CCC----HHH-----HhccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCC
Q psy8190 159 NQAYRLKKVGLDYYNHNL--DTS----PKL-----YGDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SES 220 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~--et~----~e~-----l~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get 220 (348)
+.+..|++.|++.|.+.. ++. ..- |..+.+. .+.++..+.++.+|+.|+.|..++++.+ +..
T Consensus 110 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~NH~s~~ 184 (644)
T 3czg_A 110 ERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVLNHTADD 184 (644)
T ss_dssp HTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEEETT
T ss_pred HHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCCcccc
Confidence 567888888999888752 221 112 2234432 3789999999999999999999999998 543
No 390
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=50.38 E-value=74 Score=29.35 Aligned_cols=75 Identities=4% Similarity=-0.003 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhCC------CCEEEEeccCCCC---Ccc---cHH-HHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHH
Q psy8190 100 IESVITAAQKAKSDG------ATRFCMGAAWREL---KDR---DLD-NIENMICEVKK-IGLETCLTLGMLNENQAYRLK 165 (348)
Q Consensus 100 ~eei~~~~~~~~~~G------~~~i~l~gg~~~~---~~~---~~~-~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk 165 (348)
.++....++.+.+.| +..|.+.++.... ... ... .-.++++.+++ .++++.++.+. +.+.++.+.
T Consensus 259 ~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~~~~a~~~l 337 (402)
T 2hsa_B 259 LSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-TRELGIEAV 337 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-CHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-CHHHHHHHH
Confidence 455666666666667 7777776652111 000 001 12455566665 35566655555 777777777
Q ss_pred HhC-CCeeecc
Q psy8190 166 KVG-LDYYNHN 175 (348)
Q Consensus 166 ~aG-~~~i~~g 175 (348)
+.| +|.|.+|
T Consensus 338 ~~g~aD~V~ig 348 (402)
T 2hsa_B 338 AQGDADLVSYG 348 (402)
T ss_dssp HTTSCSEEEES
T ss_pred HCCCCceeeec
Confidence 766 7777664
No 391
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans}
Probab=50.35 E-value=35 Score=32.16 Aligned_cols=55 Identities=11% Similarity=0.197 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+|.++.|+++|++.+.+++ +=.+++..=....+ ++-.-+.++.+++.|+.+.+++
T Consensus 62 ~eDi~lm~~~G~~~~R~si-~Wsri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL 119 (453)
T 3ahx_A 62 KEDVQLLKSLGIKSYRFSI-AWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITI 119 (453)
T ss_dssp HHHHHHHHHTTCCEEEEEC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCeEeccc-CHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 5889999999999999988 31445443111124 7778889999999999877665
No 392
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=50.34 E-value=1.5e+02 Score=26.93 Aligned_cols=120 Identities=13% Similarity=0.103 Sum_probs=81.8
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
..+.+..++++.++.+.|..-|-++- |. +.-.+.+..|++ ..+++.+.. .++...+..-.++|++-+.++
T Consensus 42 T~D~~atv~Qi~~l~~aG~diVRvav----p~----~~~a~al~~I~~~~~vPlvaDi-Hf~~~lal~a~e~G~dklRIN 112 (366)
T 3noy_A 42 THDVEATLNQIKRLYEAGCEIVRVAV----PH----KEDVEALEEIVKKSPMPVIADI-HFAPSYAFLSMEKGVHGIRIN 112 (366)
T ss_dssp TTCHHHHHHHHHHHHHTTCCEEEEEC----CS----HHHHHHHHHHHHHCSSCEEEEC-CSCHHHHHHHHHTTCSEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCC----CC----hHHHHHHHHHHhcCCCCEEEeC-CCCHHHHHHHHHhCCCeEEEC
Confidence 36789999999999999999887742 22 223566777765 355553322 367777777888999998876
Q ss_pred CCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeee---------c-CCCHHHHHHHH----HHHHhcC
Q psy8190 176 LDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIG---------L-SESRDQRAELI----FQLANLN 235 (348)
Q Consensus 176 ~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~G---------l-get~e~~~~~l----~~l~~l~ 235 (348)
..- ++ +.+.+.+.++.+++.|.++..++=-| + +.|++.+++++ +.+.+++
T Consensus 113 PGN-------ig---~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 113 PGN-------IG---KEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp HHH-------HS---CHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred Ccc-------cC---chhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
Confidence 532 11 34566778999999999888776555 3 35776666654 4455555
No 393
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=50.30 E-value=90 Score=27.68 Aligned_cols=95 Identities=12% Similarity=0.031 Sum_probs=57.2
Q ss_pred cccHHHHHHHHHHHHhcCcEEE---EecC---CCCHHHHHHHHHh----CCCeeec--cCCCCHHHHhccCCCCCHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLETC---LTLG---MLNENQAYRLKKV----GLDYYNH--NLDTSPKLYGDIISTRDYENRL 196 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~i~---~~~g---~l~~e~l~~Lk~a----G~~~i~~--g~et~~e~l~~i~~~~~~~~~~ 196 (348)
..+.+.+.++++.+.+.|+.-- -+.| .++.++-..+.+. .-.++.+ |+. ..+.++.+
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-----------~~~t~~ai 96 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-----------AHSTRQVL 96 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-----------CSSHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-----------CCCHHHHH
Confidence 4678899999998887665432 2344 4666544433332 1123322 221 24778888
Q ss_pred HHHHHHHHcCCeee-EeEe-eec-CCCHHHHHHHHHHHHhc
Q psy8190 197 NTLKNVRNVGINIC-CGGI-IGL-SESRDQRAELIFQLANL 234 (348)
Q Consensus 197 ~~i~~~~~~G~~i~-~~~i-~Gl-get~e~~~~~l~~l~~l 234 (348)
+..+.+.+.|..-. +.-. |-. .-+.+.+.++++.+.+-
T Consensus 97 ~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a 137 (318)
T 3qfe_A 97 EHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQ 137 (318)
T ss_dssp HHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhh
Confidence 88999999998522 2212 211 25788999999888775
No 394
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=50.30 E-value=66 Score=29.78 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEee---e-c-CCCHHHHHHHHHHHHh
Q psy8190 159 NQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGII---G-L-SESRDQRAELIFQLAN 233 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~---G-l-get~e~~~~~l~~l~~ 233 (348)
+.++.|.++|+|-+.+ ||.+ +..+..-+++.+++.|+++.+.+-+ | + |++.++.+..+ ..
T Consensus 143 eqi~~L~~~GvDlll~--ETi~----------~~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~l---~~ 207 (406)
T 1lt8_A 143 QQLEVFMKKNVDFLIA--EYFE----------HVEEAVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRL---VK 207 (406)
T ss_dssp HHHHHHHHHTCSEEEE--CCCS----------CHHHHHHHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHHH---HT
T ss_pred HHHHHHhhCCCCEEEE--cccC----------CHHHHHHHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHHh---hc
Confidence 4566677777777663 5521 2234444456666667766555555 3 4 67766655544 33
Q ss_pred cCCCCCeeeccc
Q psy8190 234 LNPYPESVPINN 245 (348)
Q Consensus 234 l~~~~~~i~~~~ 245 (348)
++ ++.|.++.
T Consensus 208 ~~--~~avGvNC 217 (406)
T 1lt8_A 208 AG--ASIIGVNC 217 (406)
T ss_dssp TT--CSEEEEES
T ss_pred CC--CCEEEecC
Confidence 44 66666666
No 395
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=50.23 E-value=73 Score=28.83 Aligned_cols=69 Identities=14% Similarity=0.206 Sum_probs=45.1
Q ss_pred HHHHHhCCCCEEEEec---cCCCCCccc-H------HHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGA---AWRELKDRD-L------DNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~g---g~~~~~~~~-~------~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.+.| |+......+ . ....++++.+++ .++++.+..|..+.+.+..+.++|.+.|.+|
T Consensus 158 a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 158 ARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp HHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 4456678999998855 211111100 0 013455666664 4778887888779999999999999998875
No 396
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=50.20 E-value=1.1e+02 Score=26.24 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhc-CcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 134 NIENMICEVKKI-GLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 134 ~~~~l~~~i~~~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+.++++.+++. ++++.+..|.-+.+.++. ..+|.|.+-+|
T Consensus 193 ~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 193 RIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVG 234 (262)
T ss_dssp HHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEEC
T ss_pred cHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEEC
Confidence 345666666653 566666677777777777 45567776654
No 397
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=50.18 E-value=46 Score=29.70 Aligned_cols=65 Identities=14% Similarity=0.054 Sum_probs=44.5
Q ss_pred HHHHHhCCCCEEEEecc---CCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAA---WRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg---~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|++.|.+.|. +...... ..++++.+++ .++++.+..|..+.+.+..+..+|.+.+.+|
T Consensus 123 a~~~~~~GaD~i~v~g~~~GG~~g~~~----~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 123 AKRMEKIGADAVIAEGMEAGGHIGKLT----TMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSC----HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCCCcc----HHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEec
Confidence 44566789999988652 1111111 2255566654 4788888888888999988888999998875
No 398
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=50.02 E-value=90 Score=30.07 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK 144 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~ 144 (348)
+++.+++.++.+.+.|+..|+|.+... ...+..+.++++.+++
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~ 215 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAA---LLKPQPAYDIIKAIKD 215 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTC---CCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCC---CcCHHHHHHHHHHHHH
Confidence 456666666666666666666654211 1233455555555543
No 399
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=49.65 E-value=55 Score=31.22 Aligned_cols=71 Identities=14% Similarity=0.067 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhc--CcEEEEecCCCCHHHHHHHHHhCCCeeeccCC
Q psy8190 101 ESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKI--GLETCLTLGMLNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 101 eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~--~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
.+..+.++.+.+.|+..|.+..+...+ ....++++.+++. ++.+.+ .+..+.+.++.+.++|++.+.++.+
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G~~-----~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg~~ 326 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQGNS-----VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGVDGLRVGMG 326 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCCS-----HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEECSS
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCCcc-----hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCCCEEEECCC
No 400
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A
Probab=49.64 E-value=38 Score=31.67 Aligned_cols=56 Identities=11% Similarity=0.113 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCC---HHHHHHHHHHHHHcCCeeeEeEe
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRD---YENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~---~~~~~~~i~~~~~~G~~i~~~~i 214 (348)
++.++.|+++|++.+.+++ +=.+++..-...-+ ++..-+.++.+++.|+.+.+++.
T Consensus 60 ~eDi~lm~~~G~~~~R~si-~W~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~ 118 (431)
T 1ug6_A 60 EEDIALMQSLGVRAYRFSV-AWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLY 118 (431)
T ss_dssp HHHHHHHHHHTCCEEEEEC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEccc-CHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 5889999999999999887 21344433211123 77778889999999998766653
No 401
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=49.24 E-value=42 Score=29.55 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=38.5
Q ss_pred CCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCC---C--CC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 155 MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIS---T--RD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 155 ~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~---~--~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
.++++.++.|+++|++.|-+.+.- ..+-+ . .+ .+...+.++.++++|+.+..++
T Consensus 41 ~~~~~d~~~l~~~G~n~vRi~i~w-----~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildl 102 (320)
T 3nco_A 41 YIEDEYFKIIKERGFDSVRIPIRW-----SAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINC 102 (320)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCG-----GGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCHHHHHHHHHCCCCEEEEeeeh-----HHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 467999999999999999887521 11111 1 11 5666788999999999876653
No 402
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=49.23 E-value=1.5e+02 Score=26.61 Aligned_cols=140 Identities=16% Similarity=0.157 Sum_probs=80.5
Q ss_pred HHHHHHHhCCCeeecc--CCC--CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEee-ec---CCC--------HHH
Q psy8190 160 QAYRLKKVGLDYYNHN--LDT--SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGII-GL---SES--------RDQ 223 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g--~et--~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~-Gl---get--------~e~ 223 (348)
..+.+++.|.|.|.+- ..+ .+++-. +..+.+.+..+.+++.|+++-.-+|. +- ++. ++-
T Consensus 115 sve~a~~~GADAVk~lv~~g~d~~~e~~~-----~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~ 189 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDVDGDPQVNV-----QKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHK 189 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECTTSCHHHHH-----HHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHH
T ss_pred CHHHHHHcCCCEEEEEEEcCCCchHHHHH-----HHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHH
Confidence 4788999999988763 222 122211 12356677788899999998766544 54 232 333
Q ss_pred HHHHHHHH--HhcCCCCCeeecccccccCCCC-----CCC-CCCCCHHHHHHHHHHHHHHCCCCceecccccc-ccchhh
Q psy8190 224 RAELIFQL--ANLNPYPESVPINNLVQIKGTP-----LYG-SSILDPLEFIRTIAVARITMPTSRIRMSAGRK-EMGETT 294 (348)
Q Consensus 224 ~~~~l~~l--~~l~~~~~~i~~~~l~P~~gT~-----l~~-~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~-~l~~~~ 294 (348)
+...++.+ .+++ +|.+.+. .||++ +.. ....+.++..+.+...-...|-..|-+|+|-. ..-...
T Consensus 190 V~~a~R~~~~~elG--aDv~Kve----~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~~~~~fl~~ 263 (332)
T 3iv3_A 190 VNDAMKVFSAERFG--IDVLKVE----VPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGVSAELFQET 263 (332)
T ss_dssp HHHHHHHHTSGGGC--CSEEEEC----CSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHhhcCcC--CcEEEEe----cCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHH
Confidence 66777777 5667 8888753 34443 211 12345555544433332333434455566531 112344
Q ss_pred HHHHHHhCc--ceeeeCC
Q psy8190 295 QAFCFLAGA--NSIFYGD 310 (348)
Q Consensus 295 ~~~~l~~GA--n~~~~~~ 310 (348)
-..++.+|| +++..|-
T Consensus 264 v~~A~~aGa~f~Gv~~GR 281 (332)
T 3iv3_A 264 LVFAHKAGAKFNGVLCGR 281 (332)
T ss_dssp HHHHHHHTCCCCEEEECH
T ss_pred HHHHHHcCCCcceEEeeH
Confidence 456899999 9997764
No 403
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=48.81 E-value=1.5e+02 Score=26.62 Aligned_cols=67 Identities=13% Similarity=0.103 Sum_probs=41.4
Q ss_pred HHHHHhCCCCEEEEeccCC-CCCc-----ccHHHHHHHHHHHH-hc------CcEEEE-ecCCCCHHHHHHHHHhCCCee
Q psy8190 107 AQKAKSDGATRFCMGAAWR-ELKD-----RDLDNIENMICEVK-KI------GLETCL-TLGMLNENQAYRLKKVGLDYY 172 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~-~~~~-----~~~~~~~~l~~~i~-~~------~~~i~~-~~g~l~~e~l~~Lk~aG~~~i 172 (348)
++...+.|+..|.+...+. ..++ .-..++.++++.++ +. ++.+.. ..|. ...++.|.+.|++.+
T Consensus 203 ~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~--~~~l~~l~~~g~d~i 280 (367)
T 1r3s_A 203 LVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG--HFALEELAQAGYEVV 280 (367)
T ss_dssp HHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC--GGGHHHHTTSSCSEE
T ss_pred HHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc--HHHHHHHHhcCCCEE
Confidence 3444567998886654321 1122 12346677778887 54 354444 3444 567889999999988
Q ss_pred ecc
Q psy8190 173 NHN 175 (348)
Q Consensus 173 ~~g 175 (348)
++.
T Consensus 281 ~~d 283 (367)
T 1r3s_A 281 GLD 283 (367)
T ss_dssp ECC
T ss_pred EeC
Confidence 764
No 404
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=48.79 E-value=1.4e+02 Score=26.37 Aligned_cols=162 Identities=11% Similarity=0.169 Sum_probs=84.4
Q ss_pred cHHHHHHHHHHHHhc-CcEEEEecCCCC---HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcC
Q psy8190 131 DLDNIENMICEVKKI-GLETCLTLGMLN---ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVG 206 (348)
Q Consensus 131 ~~~~~~~l~~~i~~~-~~~i~~~~g~l~---~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G 206 (348)
+.+.+.+.++.+++. +..+.++.-..+ .+.++.+.++|++.|.++.... .+.++.+++.|
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~p----------------~~~i~~l~~~g 110 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNP----------------SKYMERFHEAG 110 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSCG----------------GGTHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCCh----------------HHHHHHHHHcC
Confidence 456777788888763 344455543212 5678899999999999876421 12355566678
Q ss_pred CeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceecccc
Q psy8190 207 INICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAG 286 (348)
Q Consensus 207 ~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g 286 (348)
+++...+ .+.++ +..+.+.+ ++.+.+.... .|..- ......+ ++...+... +..+-+++|
T Consensus 111 ~~v~~~v-----~~~~~----a~~~~~~G--aD~i~v~g~~--~GG~~---g~~~~~~---ll~~i~~~~-~iPViaaGG 170 (332)
T 2z6i_A 111 IIVIPVV-----PSVAL----AKRMEKIG--ADAVIAEGME--AGGHI---GKLTTMT---LVRQVATAI-SIPVIAAGG 170 (332)
T ss_dssp CEEEEEE-----SSHHH----HHHHHHTT--CSCEEEECTT--SSEEC---CSSCHHH---HHHHHHHHC-SSCEEEESS
T ss_pred CeEEEEe-----CCHHH----HHHHHHcC--CCEEEEECCC--CCCCC---CCccHHH---HHHHHHHhc-CCCEEEECC
Confidence 7665432 34443 44556677 7888775431 12111 1122222 223333333 222323333
Q ss_pred ccccchhhHHHHHHhCcceeeeCCeeccCCCC-CchHHHHHHHHc
Q psy8190 287 RKEMGETTQAFCFLAGANSIFYGDKLLTTDNT-KTNDDSKLLKKL 330 (348)
Q Consensus 287 ~~~l~~~~~~~~l~~GAn~~~~~~~~~~~~g~-~~~~~~~~i~~~ 330 (348)
-.+ .+....++..||+.+..|..+...... ..+...+.+.+.
T Consensus 171 I~~--~~~~~~al~~GAdgV~vGs~~l~~~e~~~~~~~k~~~~~~ 213 (332)
T 2z6i_A 171 IAD--GEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKA 213 (332)
T ss_dssp CCS--HHHHHHHHHTTCSEEEECHHHHTBTTCCSCHHHHHHHHHC
T ss_pred CCC--HHHHHHHHHcCCCEEEecHHHhcCccccccHHHHHHHHhC
Confidence 211 333445677899999777554333222 234444444443
No 405
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=48.68 E-value=1.1e+02 Score=25.03 Aligned_cols=156 Identities=12% Similarity=0.036 Sum_probs=82.9
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHH
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLY 183 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l 183 (348)
+.++.+.+.|++.|.+.-. ..+.+.+.++++.+.+ .+..+.+| +.++...++|++.|.++.+..+.
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k-----~~~~~~~~~~i~~l~~~~~~~livn------d~~~~A~~~gadgvhl~~~~~~~-- 83 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKP-----ETPAMYSERLLTLIPEKYHRRIVTH------EHFYLKEEFNLMGIHLNARNPSE-- 83 (210)
T ss_dssp HHHHHHHHTTCCEEEECCS-----SCCHHHHHHHHHHSCGGGGGGEEES------SCTTHHHHTTCSEEECCSSSCSC--
T ss_pred HHHHHHHHCCCCEEEEccC-----CCCHHHHHHHHHHHHHHhCCeEEEe------CCHHHHHHcCCCEEEECcccccc--
Confidence 4556677889998877532 2345666667666644 35555554 33477888999999886544210
Q ss_pred hccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCH
Q psy8190 184 GDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDP 262 (348)
Q Consensus 184 ~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~ 262 (348)
. .. . +.++|. -.|.++.. .+. .+ .+.+.+.++.|.+..|-. .++.+.
T Consensus 84 ---~--~~-------------~------~~~ig~s~~t~~e~~----~A~-~G--aDyv~~g~vf~t~sk~~~-~~~~g~ 131 (210)
T 3ceu_A 84 ---P--HD-------------Y------AGHVSCSCHSVEEVK----NRK-HF--YDYVFMSPIYDSISKVNY-YSTYTA 131 (210)
T ss_dssp ---C--TT-------------C------CSEEEEEECSHHHHH----TTG-GG--SSEEEECCCC----------CCCCH
T ss_pred ---c--cc-------------c------CCEEEEecCCHHHHH----HHh-hC--CCEEEECCcCCCCCCCCC-CCCCCH
Confidence 0 00 0 446677 56777642 233 56 889998887765432211 123343
Q ss_pred HHHHHHHHHHHHHC-CCCceeccccccccchhhHHHHHHhCcceeeeCCee
Q psy8190 263 LEFIRTIAVARITM-PTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDKL 312 (348)
Q Consensus 263 ~~~~~~~a~~R~~l-p~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~~ 312 (348)
+.+ + ..+..+ ++..+-+.+|- .++.-..++.+||+.+..+..+
T Consensus 132 ~~l-~---~~~~~~~~~iPviaiGGI---~~~nv~~~~~~Ga~gVav~s~i 175 (210)
T 3ceu_A 132 EEL-R---EAQKAKIIDSKVMALGGI---NEDNLLEIKDFGFGGAVVLGDL 175 (210)
T ss_dssp HHH-H---HHHHTTCSSTTEEEESSC---CTTTHHHHHHTTCSEEEESHHH
T ss_pred HHH-H---HHHHhcCCCCCEEEECCC---CHHHHHHHHHhCCCEEEEhHHh
Confidence 322 2 222222 23223233332 2333455778999999665544
No 406
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=48.60 E-value=88 Score=27.63 Aligned_cols=126 Identities=12% Similarity=0.125 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCc------------ccHHHHHHHHHHHHh-cCcEEEE--ecCCCCH---HH
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKD------------RDLDNIENMICEVKK-IGLETCL--TLGMLNE---NQ 160 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~------------~~~~~~~~l~~~i~~-~~~~i~~--~~g~l~~---e~ 160 (348)
.++++.+.++.+.+. ++.|-|..| .|.. .+.+.+.++++.+++ .++++.+ ++|.... +.
T Consensus 69 ~~~~~~~aa~~a~~~-~d~Iein~g--cP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~ 145 (318)
T 1vhn_A 69 EPNELSEAARILSEK-YKWIDLNAG--CPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEI 145 (318)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEEEC--CCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHH
T ss_pred CHHHHHHHHHHHHHh-CCEEEEECC--CCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHH
Confidence 468888888888888 998888765 2221 246788899999987 3566554 5563322 68
Q ss_pred HHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecC-CCHHHHHHHHHHHHhcCCCCC
Q psy8190 161 AYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLS-ESRDQRAELIFQLANLNPYPE 239 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glg-et~e~~~~~l~~l~~l~~~~~ 239 (348)
++.+.++|++.|.+.--+....+ .+...+ +.+..+++ ++++ |..=| .|.++..+.+.. .+ .+
T Consensus 146 a~~l~~~G~d~i~v~g~~~~~~~---~~~~~~----~~i~~i~~-~ipV----i~~GgI~s~~da~~~l~~---~g--ad 208 (318)
T 1vhn_A 146 YRILVEEGVDEVFIHTRTVVQSF---TGRAEW----KALSVLEK-RIPT----FVSGDIFTPEDAKRALEE---SG--CD 208 (318)
T ss_dssp HHHHHHTTCCEEEEESSCTTTTT---SSCCCG----GGGGGSCC-SSCE----EEESSCCSHHHHHHHHHH---HC--CS
T ss_pred HHHHHHhCCCEEEEcCCCccccC---CCCcCH----HHHHHHHc-CCeE----EEECCcCCHHHHHHHHHc---CC--CC
Confidence 89999999999987432211111 111122 33444444 4432 22112 577887766643 34 56
Q ss_pred eeecc
Q psy8190 240 SVPIN 244 (348)
Q Consensus 240 ~i~~~ 244 (348)
.|.+.
T Consensus 209 ~V~iG 213 (318)
T 1vhn_A 209 GLLVA 213 (318)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 66554
No 407
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=48.47 E-value=71 Score=28.04 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=43.7
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHH-hCCCeeeccC
Q psy8190 105 TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKK-VGLDYYNHNL 176 (348)
Q Consensus 105 ~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~-aG~~~i~~g~ 176 (348)
+.++.+.+.|+.+|+.+|+.. ......+.+.++++.... .+.+.+- |-++.+-+..+.+ +|++.+..+.
T Consensus 170 ~Ale~Li~lGvdrILTSG~~~-~a~~Gl~~Lk~Lv~~a~~-rI~ImaG-GGV~~~Ni~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSGCDS-SALEGLPLIKRLIEQAKG-RIVVMPG-GGITDRNLQRILEGSGATEFHCSA 239 (287)
T ss_dssp HHHHHHHHHTCSEEEECTTSS-STTTTHHHHHHHHHHHTT-SSEEEEC-TTCCTTTHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHcCCCEEECCCCCC-ChHHhHHHHHHHHHHhCC-CCEEEEC-CCcCHHHHHHHHHhhCCCEEeECc
Confidence 334555666999998877632 223456667666655332 3555433 3577777776655 9999998764
No 408
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=48.43 E-value=6.5 Score=37.27 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=29.8
Q ss_pred ccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCC
Q psy8190 185 DIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SES 220 (348)
Q Consensus 185 ~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get 220 (348)
.+.+. .+.++..+.++.||+.|++|..++++.+ +..
T Consensus 66 ~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (471)
T 1jae_A 66 IINTRSGDESAFTDMTRRCNDAGVRIYVDAVINHMTGM 103 (471)
T ss_dssp CSEETTEEHHHHHHHHHHHHHTTCEEEEEECCSBCCSS
T ss_pred cccCCCCCHHHHHHHHHHHHHCCCEEEEEEecccccCC
Confidence 44443 3789999999999999999999999998 543
No 409
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=48.37 E-value=1.3e+02 Score=25.87 Aligned_cols=134 Identities=16% Similarity=0.126 Sum_probs=77.2
Q ss_pred HHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHH---------HHHHH-
Q psy8190 161 AYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRA---------ELIFQ- 230 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~---------~~l~~- 230 (348)
...|+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++. .-++.
T Consensus 87 ~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~vv~~Ql~~~ 157 (261)
T 1m6j_A 87 VGMLVDCQVPYVILGH----SERRQIF-HESNEQVAEKVKVAIDAGLKV----IACIGETEAQRIANQTEEVVAAQLKAI 157 (261)
T ss_dssp HHHHHHTTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHHTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhCCCHHHHHHHHHHHH
Confidence 5678999999999876 2222221 346777788899999999964 333478777654 12221
Q ss_pred HHhcCCCCCee--eccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-------Ccee-ccccccccchhhHHHH
Q psy8190 231 LANLNPYPESV--PINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT-------SRIR-MSAGRKEMGETTQAFC 298 (348)
Q Consensus 231 l~~l~~~~~~i--~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-------~~i~-~s~g~~~l~~~~~~~~ 298 (348)
+..+. .+.. .+-.|-|. =||. ..++++..-++.+..|..+.. ..++ +.+|-.+- .+...++
T Consensus 158 l~~~~--~~~~~~~vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~ 230 (261)
T 1m6j_A 158 NNAIS--KEAWKNIILAYEPVWAIGTG----KTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNP-ANCNELA 230 (261)
T ss_dssp HHHSC--TGGGGGEEEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCT-TTHHHHH
T ss_pred HhcCC--HHHcCCEEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCH-hhHHHHh
Confidence 22232 1110 11122232 2443 457899999999999965432 1233 22333332 3445556
Q ss_pred HHhCcceeeeCC
Q psy8190 299 FLAGANSIFYGD 310 (348)
Q Consensus 299 l~~GAn~~~~~~ 310 (348)
...++|+++.|.
T Consensus 231 ~~~diDG~LVGg 242 (261)
T 1m6j_A 231 KKADIDGFLVGG 242 (261)
T ss_dssp TSTTCCEEEESG
T ss_pred cCCCCCeeEecH
Confidence 678899987664
No 410
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=48.36 E-value=1.5e+02 Score=26.60 Aligned_cols=80 Identities=15% Similarity=0.149 Sum_probs=51.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEE--eccCCC------CCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCM--GAAWRE------LKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l--~gg~~~------~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~ 169 (348)
.+++++.+.++.....|...+-+ .|+... .+..+.+.+.++++..++.++.+.++.. ....++.+.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~--~~~~i~~~~~~g~ 250 (418)
T 2qs8_A 173 NGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAH--GAEGMKRAIKAGV 250 (418)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEEC--SHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEEC--CHHHHHHHHHcCC
Confidence 45677777776655567666533 232111 1234678889999988888888877764 3455777777898
Q ss_pred CeeeccCCCC
Q psy8190 170 DYYNHNLDTS 179 (348)
Q Consensus 170 ~~i~~g~et~ 179 (348)
+++.++.-.+
T Consensus 251 ~~i~H~~~~~ 260 (418)
T 2qs8_A 251 DSIEHGTFMD 260 (418)
T ss_dssp SEEEECTTCC
T ss_pred CEEEECCCCC
Confidence 8887765433
No 411
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=48.29 E-value=1.1e+02 Score=26.86 Aligned_cols=127 Identities=13% Similarity=0.129 Sum_probs=68.4
Q ss_pred cCHHHHHHHHHHHHhCCCCEE-EEec-cCCC--------CCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHh
Q psy8190 98 LSIESVITAAQKAKSDGATRF-CMGA-AWRE--------LKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKV 167 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i-~l~g-g~~~--------~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~a 167 (348)
.....+++ .+++.|+..+ .+.+ |.-+ -.....+...++++..++.++... +-..+.++.+.+.++
T Consensus 108 ~~~g~~Le---~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti--~~v~~~eeA~amA~a 182 (286)
T 2p10_A 108 MVMSTFLR---ELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTT--PYVFSPEDAVAMAKA 182 (286)
T ss_dssp CCHHHHHH---HHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEC--CEECSHHHHHHHHHH
T ss_pred cCHHHHHH---HHHHhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEE--EecCCHHHHHHHHHc
Confidence 45677774 4455677766 1110 0000 012456788888888888877653 224788999999999
Q ss_pred CCCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe--Ee-ee-cCCCHHHHHHHHHH
Q psy8190 168 GLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCG--GI-IG-LSESRDQRAELIFQ 230 (348)
Q Consensus 168 G~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~--~i-~G-lget~e~~~~~l~~ 230 (348)
|.|-|-+-+.. .-+..- .....+.++-.+.++.+.++--.++.+ ++ .| --.+++|+...++.
T Consensus 183 gpDiI~~h~glT~gglIG-~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~ 249 (286)
T 2p10_A 183 GADILVCHMGLTTGGAIG-ARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDS 249 (286)
T ss_dssp TCSEEEEECSCC----------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccc-CCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhc
Confidence 99998876553 112111 122345555334443333332222222 22 22 23788888777654
No 412
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=48.20 E-value=1.7e+02 Score=26.95 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=29.5
Q ss_pred HHHHhCCCCEEEEeccCCCCC----------cccHHHHHHHHHHHHhcCcEEEEe
Q psy8190 108 QKAKSDGATRFCMGAAWRELK----------DRDLDNIENMICEVKKIGLETCLT 152 (348)
Q Consensus 108 ~~~~~~G~~~i~l~gg~~~~~----------~~~~~~~~~l~~~i~~~~~~i~~~ 152 (348)
+.+++.|+..|.+.-- ..|. ..+.+++.++++..++.|+.+.+.
T Consensus 55 ~ilk~~G~N~VRlrvw-v~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlld 108 (399)
T 1ur4_A 55 KTLKEAGVNYVRVRIW-NDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLAD 108 (399)
T ss_dssp HHHHHTTCCEEEEEEC-SCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHCCCCEEEEeee-cCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3455689988876211 1111 146789999999999988888764
No 413
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=48.14 E-value=1.1e+02 Score=25.07 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=44.1
Q ss_pred HHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEE-ecCCCCHHHHHHHHHhCCCeeec
Q psy8190 107 AQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL-TLGMLNENQAYRLKKVGLDYYNH 174 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~-~~g~l~~e~l~~Lk~aG~~~i~~ 174 (348)
++.+.+.|+..+.+-+. . ..+.+.++++.+++.++...+ -++..|.+.+..+.+.|++.+-+
T Consensus 76 ~~~~~~aGad~i~vh~~--~----~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 76 SRMAFEAGADWITVSAA--A----HIATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIY 138 (218)
T ss_dssp HHHHHHHTCSEEEEETT--S----CHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHhcCCCEEEEecC--C----CHHHHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccceee
Confidence 35566779998877654 1 124467777888887887765 45656778888888889997654
No 414
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A
Probab=48.01 E-value=40 Score=32.31 Aligned_cols=56 Identities=16% Similarity=0.221 Sum_probs=41.6
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccC--CCCC---HHHHHHHHHHHHHcCCeeeEeEe
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDII--STRD---YENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~--~~~~---~~~~~~~i~~~~~~G~~i~~~~i 214 (348)
+|.++.|+++|++.+.+++ +=.+++..=. ...+ ++-.-+.++.+++.||.+.+++.
T Consensus 81 ~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~ 141 (512)
T 1v08_A 81 KTDVRLLKEMGMDAYRFSI-SWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIF 141 (512)
T ss_dssp HHHHHHHHHTTCSEEEEEC-CHHHHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHhCCCeEeccc-CHhhhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5889999999999999988 3145544321 1224 77888899999999998776653
No 415
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=47.92 E-value=1.3e+02 Score=25.58 Aligned_cols=175 Identities=12% Similarity=0.135 Sum_probs=104.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEec----CCCCHH----HHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTL----GMLNEN----QAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~----g~l~~e----~l~~Lk~aG~ 169 (348)
.+.++|.+.++++.+.|+..||+..+ ...... +.++..++.+++-. |..+.+ ..+.-.+.|.
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~p~-------~v~~a~---~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GA 109 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVNPT-------WVPLCA---ELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGA 109 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG-------GHHHHH---HHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH-------HHHHHH---HHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCC
Confidence 67899999999999999999988322 222333 33445567776543 333332 3445555699
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHc--CCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeeccc-
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNV--GINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINN- 245 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~--G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~- 245 (348)
+-|.+-+.- ..++ ..+++.+.+-++.++++ +. ..-+|+-- --|.+++....+...+.+ .+.|..+.
T Consensus 110 dEIDmViNi--g~lk----~g~~~~v~~eI~~v~~a~~~~--~lKVIlEt~~Lt~eei~~a~~ia~~aG--ADfVKTSTG 179 (239)
T 3ngj_A 110 EEVDMVINI--GMVK----AKKYDDVEKDVKAVVDASGKA--LTKVIIECCYLTNEEKVEVCKRCVAAG--AEYVKTSTG 179 (239)
T ss_dssp SEEEEECCH--HHHH----TTCHHHHHHHHHHHHHHHTTS--EEEEECCGGGSCHHHHHHHHHHHHHHT--CSEEECCCS
T ss_pred CEEEEEeeh--HHhc----cccHHHHHHHHHHHHHHhcCC--ceEEEEecCCCCHHHHHHHHHHHHHHC--cCEEECCCC
Confidence 988764421 1111 34677777777766653 33 23335433 247788888888888898 88887663
Q ss_pred ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCccee
Q psy8190 246 LVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSI 306 (348)
Q Consensus 246 l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~ 306 (348)
|.+ ...+.+....|-... =+...|.+|+|-.+. +.....+.+||+.+
T Consensus 180 f~~---------ggAt~~dv~lmr~~v---g~~v~VKasGGIrt~--~da~~~i~aGA~ri 226 (239)
T 3ngj_A 180 FGT---------HGATPEDVKLMKDTV---GDKALVKAAGGIRTF--DDAMKMINNGASRI 226 (239)
T ss_dssp SSS---------CCCCHHHHHHHHHHH---GGGSEEEEESSCCSH--HHHHHHHHTTEEEE
T ss_pred CCC---------CCCCHHHHHHHHHhh---CCCceEEEeCCCCCH--HHHHHHHHhcccce
Confidence 321 123444333332222 234567788774432 33455689999977
No 416
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=47.91 E-value=1.3e+02 Score=25.68 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=79.2
Q ss_pred cCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHH-------
Q psy8190 153 LGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRA------- 225 (348)
Q Consensus 153 ~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~------- 225 (348)
.|.++ ...|+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++.
T Consensus 75 TGEiS---~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~v 142 (248)
T 1r2r_A 75 TGEIS---PGMIKDCGATWVVLGH----SERRHVF-GESDELIGQKVAHALSEGLGV----IACIGEKLDEREAGITEKV 142 (248)
T ss_dssp TTCCC---HHHHHHTTCCEEEESC----HHHHHTS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHH
T ss_pred cCccC---HHHHHHcCCCEEEECC----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhCCChHHH
Confidence 45555 5678999999999876 2222221 346777888899999999964 333478877654
Q ss_pred --HHHHH-HHhcCCCCCeeeccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-------Ccee-ccccccccch
Q psy8190 226 --ELIFQ-LANLNPYPESVPINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT-------SRIR-MSAGRKEMGE 292 (348)
Q Consensus 226 --~~l~~-l~~l~~~~~~i~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-------~~i~-~s~g~~~l~~ 292 (348)
.-++. +..+.. ...+ +-.|-|. =||- ..++++..-.+.+..|..+.. ..++ +.+|-.+- .
T Consensus 143 v~~Ql~~~l~~~~~-~~~~-vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~ 215 (248)
T 1r2r_A 143 VFEQTKVIADNVKD-WSKV-VLAYEPVWAIGTG----KTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTG-A 215 (248)
T ss_dssp HHHHHHHHHHTCSC-GGGE-EEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCT-T
T ss_pred HHHHHHHHHhhhhh-hhce-EEEEecHHhhCCC----CCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCH-h
Confidence 11221 111110 0111 1122221 2443 457899999999999965432 1233 22333332 3
Q ss_pred hhHHHHHHhCcceeeeCC
Q psy8190 293 TTQAFCFLAGANSIFYGD 310 (348)
Q Consensus 293 ~~~~~~l~~GAn~~~~~~ 310 (348)
+...++...++|+++.|.
T Consensus 216 N~~~l~~~~diDG~LVGg 233 (248)
T 1r2r_A 216 TCKELASQPDVDGFLVGG 233 (248)
T ss_dssp THHHHHTSTTCCEEEESG
T ss_pred HHHHHHcCCCCCeeEech
Confidence 445566678899987764
No 417
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=47.71 E-value=53 Score=27.13 Aligned_cols=67 Identities=15% Similarity=0.201 Sum_probs=39.9
Q ss_pred HHHHhCCCCEEEEeccCCCCCccc-HHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 108 QKAKSDGATRFCMGAAWRELKDRD-LDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 108 ~~~~~~G~~~i~l~gg~~~~~~~~-~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
..+...|++.|.++....+.+... ...-.+.++.+++ .++++.+..|. +.+.+..+.++|.+.+.++
T Consensus 124 ~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 124 VQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAVM 192 (221)
T ss_dssp HHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEES
T ss_pred HHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEEh
Confidence 345567898887754311111100 0112345555554 36777766666 9999999999999988765
No 418
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=47.69 E-value=1.3e+02 Score=25.61 Aligned_cols=14 Identities=21% Similarity=0.074 Sum_probs=11.6
Q ss_pred chHHHHHHHHcCCC
Q psy8190 320 TNDDSKLLKKLGIN 333 (348)
Q Consensus 320 ~~~~~~~i~~~G~~ 333 (348)
..+..+.+++.||.
T Consensus 243 ~~~~~~~L~~~gy~ 256 (295)
T 3cqj_A 243 FERCFETLKQSGYC 256 (295)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCc
Confidence 36789999999986
No 419
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=47.57 E-value=1.2e+02 Score=27.57 Aligned_cols=51 Identities=12% Similarity=0.231 Sum_probs=32.8
Q ss_pred HHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcE--EEEecCCCCHHHHHHH
Q psy8190 110 AKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE--TCLTLGMLNENQAYRL 164 (348)
Q Consensus 110 ~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~--i~~~~g~l~~e~l~~L 164 (348)
+.+.|+..+.|--|. . .+.+++.++++..++.++. +.+|.|.++++.++.+
T Consensus 101 a~e~G~dklRINPGN--i--g~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~y 153 (366)
T 3noy_A 101 SMEKGVHGIRINPGN--I--GKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKY 153 (366)
T ss_dssp HHHTTCSEEEECHHH--H--SCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHH
T ss_pred HHHhCCCeEEECCcc--c--CchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhc
Confidence 345678878776662 1 1346778888888876654 4567888777554443
No 420
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=47.45 E-value=1.3e+02 Score=26.25 Aligned_cols=200 Identities=10% Similarity=0.070 Sum_probs=106.6
Q ss_pred cCHHHHHHHHHHHHhCC---CCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEE----------ecCCCCHHHHHHH
Q psy8190 98 LSIESVITAAQKAKSDG---ATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL----------TLGMLNENQAYRL 164 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G---~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~----------~~g~l~~e~l~~L 164 (348)
.+..+..+.++.+...- -.+|.+. |+...+..+. +.++.. +.+.+ -.|.++ ...|
T Consensus 35 ~t~~~~~~l~~~l~~~~~~~~vevvv~-----Pp~~~L~~v~---~~~~~~-i~vgAQn~~~~~~GAfTGEIS---~~mL 102 (275)
T 1mo0_A 35 GDYASVDGIVTFLNASADNSSVDVVVA-----PPAPYLAYAK---SKLKAG-VLVAAQNCYKVPKGAFTGEIS---PAMI 102 (275)
T ss_dssp CCHHHHHHHHHHHHHSCCCTTEEEEEE-----CCGGGHHHHH---HHSCTT-EEEEESCCCSSSSBSCTTCCC---HHHH
T ss_pred cCHHHHHHHHHHHhhhccccCceEEEe-----CcHHHHHHHH---HHhhCC-CeEEeccCCCCCCCCccCcCC---HHHH
Confidence 45677777776665421 1234341 3333333333 333322 44433 244555 5678
Q ss_pred HHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHH---------HHHHHHHh-c
Q psy8190 165 KKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRA---------ELIFQLAN-L 234 (348)
Q Consensus 165 k~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~---------~~l~~l~~-l 234 (348)
+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++. +-++...+ +
T Consensus 103 kd~G~~~ViiGH----SERR~~f-~Etde~V~~Kv~~Al~~GL~p----I~CvGEtleeReag~t~~vv~~Ql~~~l~~~ 173 (275)
T 1mo0_A 103 KDLGLEWVILGH----SERRHVF-GESDALIAEKTVHALEAGIKV----VFCIGEKLEEREAGHTKDVNFRQLQAIVDKG 173 (275)
T ss_dssp HHTTCCEEEESC----HHHHHTS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred HHcCCCEEEeCc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhCCChHHHHHHHHHHHHhhh
Confidence 999999999875 2222221 347777888899999999964 344478877655 11221111 1
Q ss_pred CCCCCeeeccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-------Ccee-ccccccccchhhHHHHHHhCcc
Q psy8190 235 NPYPESVPINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT-------SRIR-MSAGRKEMGETTQAFCFLAGAN 304 (348)
Q Consensus 235 ~~~~~~i~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-------~~i~-~s~g~~~l~~~~~~~~l~~GAn 304 (348)
.+....+ -.|-|. =||- ..++++..-++.+..|..+.. ..++ +.+|-.+- .+...++...++|
T Consensus 174 ~~~~~vv--IAYEPvWAIGTG----ktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~-~N~~el~~~~diD 246 (275)
T 1mo0_A 174 VSWENIV--IAYEPVWAIGTG----KTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTA-DNAAELGKKPDID 246 (275)
T ss_dssp CCSTTEE--EEECCGGGTTTS----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCT-TTHHHHTTSTTCC
T ss_pred hhhcCEE--EEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCH-hhHHHHhcCCCCC
Confidence 0000111 112221 2443 457899999999999965432 1233 22333332 3445566678899
Q ss_pred eeeeCCeeccCCCCCchHHHHHHHHc
Q psy8190 305 SIFYGDKLLTTDNTKTNDDSKLLKKL 330 (348)
Q Consensus 305 ~~~~~~~~~~~~g~~~~~~~~~i~~~ 330 (348)
+++.|.- .-.+++..++++..
T Consensus 247 G~LVGgA-----SLka~~F~~Ii~~~ 267 (275)
T 1mo0_A 247 GFLVGGA-----SLKPDFVKIINARS 267 (275)
T ss_dssp EEEESGG-----GGSTHHHHHHHHHS
T ss_pred eeEechH-----HhChHHHHHHHHhh
Confidence 9876642 22345567777654
No 421
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A*
Probab=47.44 E-value=42 Score=31.54 Aligned_cols=56 Identities=14% Similarity=0.296 Sum_probs=41.1
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCC---HHHHHHHHHHHHHcCCeeeEeEe
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRD---YENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~---~~~~~~~i~~~~~~G~~i~~~~i 214 (348)
+|.++.|++.|++.+.+++ +=.+++..=...-+ ++-.-+.++.+++.|+.+.+++.
T Consensus 61 ~eDi~lm~~~G~~~~R~si-~W~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~ 119 (447)
T 1e4i_A 61 EEDIRLMKELGIRTYRFSV-SWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLY 119 (447)
T ss_dssp HHHHHHHHHHTCSEEEEEC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEecC-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 5889999999999999887 31455543111224 67778899999999998776654
No 422
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=47.42 E-value=55 Score=28.56 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEe--cCCCCHHHHHHHHHhCCCeeeccC
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLT--LGMLNENQAYRLKKVGLDYYNHNL 176 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~--~g~l~~e~l~~Lk~aG~~~i~~g~ 176 (348)
.++.++.++.+.+.|...+++-+- .+.+.+.++.+.+. +++.++ ++.++ .+.|.+.|+.+++++.
T Consensus 167 ~~~ai~Ra~ay~eAGAd~i~~e~~------~~~~~~~~i~~~~~---~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~ 233 (275)
T 2ze3_A 167 LAETVRRGQAYADAGADGIFVPLA------LQSQDIRALADALR---VPLNVMAFPGSPV---PRALLDAGAARVSFGQ 233 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTC------CCHHHHHHHHHHCS---SCEEEECCTTSCC---HHHHHHTTCSEEECTT
T ss_pred HHHHHHHHHHHHHCCCCEEEECCC------CCHHHHHHHHHhcC---CCEEEecCCCCCC---HHHHHHcCCcEEEECh
Confidence 688888888888999998877432 23466677766664 334333 33444 4789999999999876
No 423
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A*
Probab=47.34 E-value=40 Score=31.86 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=41.3
Q ss_pred CHHHHHHHHHhCCCeeeccCCCCHHHHhccC--CCCC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 157 NENQAYRLKKVGLDYYNHNLDTSPKLYGDII--STRD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 157 ~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~--~~~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
-+|.++.|+++|++.+.+++ +=.+++..=. ..-+ ++-.-+.++.+++.|+.+.+++
T Consensus 64 y~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL 124 (465)
T 2e3z_A 64 WREDVQLLKSYGVKAYRFSL-SWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTL 124 (465)
T ss_dssp HHHHHHHHHHTTCSEEEEEC-CHHHHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred hHHHHHHHHHhCCCceeccc-chHHhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 36899999999999999988 3145554321 1224 6777888999999999876654
No 424
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=47.28 E-value=83 Score=27.83 Aligned_cols=111 Identities=10% Similarity=0.110 Sum_probs=70.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcccHHHHHHHHHHHHhc---CcEEEEecCCC-CHHH---HHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAA-WRELKDRDLDNIENMICEVKKI---GLETCLTLGML-NENQ---AYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg-~~~~~~~~~~~~~~l~~~i~~~---~~~i~~~~g~l-~~e~---l~~Lk~aG~ 169 (348)
.+.+.+.+.++.+.+.|+..+++.|. |+.+ ..+.+.-.++++...+. .+++.+..|.. +.+. .+...++|.
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGTTAESP-TLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGG 103 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESSTTTTGG-GSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCC
Confidence 67788888888888999999887765 3433 45677777788777652 46777777754 4444 445556686
Q ss_pred -CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHH-cCCeeeEeEeeec
Q psy8190 170 -DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRN-VGINICCGGIIGL 217 (348)
Q Consensus 170 -~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~-~G~~i~~~~i~Gl 217 (348)
|.+.+-.- .|. .-+.+...+-++.+.+ .++++..+-+-+.
T Consensus 104 ~davlv~~P----~y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~ 145 (311)
T 3h5d_A 104 FAAGLAIVP----YYN----KPSQEGMYQHFKAIADASDLPIIIYNIPGR 145 (311)
T ss_dssp CSEEEEECC----CSS----CCCHHHHHHHHHHHHHSCSSCEEEEECHHH
T ss_pred CcEEEEcCC----CCC----CCCHHHHHHHHHHHHHhCCCCEEEEecccc
Confidence 88775321 111 1255677777776665 4677665554443
No 425
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=47.23 E-value=98 Score=27.65 Aligned_cols=92 Identities=13% Similarity=0.109 Sum_probs=51.6
Q ss_pred HHHHHHHHhCCCeeec-cCCC--C-HHHHhccCC---------------CCCHHHHHHH-HHHHHHcCCeeeEeEeeecC
Q psy8190 159 NQAYRLKKVGLDYYNH-NLDT--S-PKLYGDIIS---------------TRDYENRLNT-LKNVRNVGINICCGGIIGLS 218 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~-g~et--~-~e~l~~i~~---------------~~~~~~~~~~-i~~~~~~G~~i~~~~i~Glg 218 (348)
+.++.|++.|+ ++.+ .+.| + -..+..+.. .......+++ +..+++.|+.+.+..+
T Consensus 216 ~~l~~Lr~~G~-~ialDDFGtG~ssl~~L~~lp~d~iKID~sfv~~~~~~~~~~~iv~~ii~la~~lg~~vvAEGV---- 290 (340)
T 4hjf_A 216 VILKTLRDAGA-GLALDDFGTGFSSLSYLTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEGV---- 290 (340)
T ss_dssp HHHHHHHHHTC-EEEEECTTSSSCGGGTGGGSCCSEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHTCEEEEECC----
T ss_pred HHHHHHHHcCC-CccccCCCCCcchHHHHHhCCCChhcccHHhhhcccCCHhHHHHHHHHHHHHHHcCCEEEEEeC----
Confidence 57889999997 4554 3444 1 223332221 1112233444 5778889998765532
Q ss_pred CCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHH
Q psy8190 219 ESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAV 271 (348)
Q Consensus 219 et~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~ 271 (348)
||.++ +..+++++ .+.+.=+.| .+|.+.++...++.-
T Consensus 291 Et~~q----~~~L~~lG--~d~~QGy~~----------~~P~~~~~~~~~l~~ 327 (340)
T 4hjf_A 291 ENAEM----AHALQSLG--CDYGQGFGY----------APALSPQEAEVYLNE 327 (340)
T ss_dssp CSHHH----HHHHHHTT--CCEEESTTT----------CCSBCHHHHHHHHHH
T ss_pred CcHHH----HHHHHHcC--CCEeecCcc----------ccCCCHHHHHHHHHh
Confidence 66554 57788888 666532222 134566777666544
No 426
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=47.10 E-value=12 Score=35.51 Aligned_cols=37 Identities=19% Similarity=0.160 Sum_probs=30.3
Q ss_pred ccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCH
Q psy8190 185 DIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-SESR 221 (348)
Q Consensus 185 ~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~ 221 (348)
.+.+. .+.++..+.++.+|+.|++|..++++.+ +...
T Consensus 73 ~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~~~ 111 (488)
T 1wza_A 73 KINPDYGTLEDFHKLVEAAHQRGIKVIIDLPINHTSERH 111 (488)
T ss_dssp EECGGGCCHHHHHHHHHHHHHTTCEEEEECCCSBCCTTS
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccccCcc
Confidence 34443 3789999999999999999999999999 6543
No 427
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=46.97 E-value=1.3e+02 Score=25.82 Aligned_cols=184 Identities=14% Similarity=0.154 Sum_probs=98.3
Q ss_pred CHHHHHHHHHHHHh-CC---CCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEE----------ecCCCCHHHHHHH
Q psy8190 99 SIESVITAAQKAKS-DG---ATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCL----------TLGMLNENQAYRL 164 (348)
Q Consensus 99 ~~eei~~~~~~~~~-~G---~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~----------~~g~l~~e~l~~L 164 (348)
+..+..+.++.+.. .. -.++.+. |+...+..+.+.+ + .++.+.+ ..|.++ ...|
T Consensus 16 ~~~~~~~l~~~l~~~~~~~~~vev~v~-----Pp~~~L~~v~~~~---~-~~i~vgAQn~~~~~~GA~TGEiS---~~mL 83 (248)
T 1o5x_A 16 TLESIKSLTNSFNNLDFDPSKLDVVVF-----PVSVHYDHTRKLL---Q-SKFSTGIQNVSKFGNGSYTGEVS---AEIA 83 (248)
T ss_dssp CHHHHHHHHHHHHTSCCCTTTEEEEEE-----CCGGGHHHHHHHS---C-TTSEEEESCCCSSCSBSCTTCCC---HHHH
T ss_pred CHHHHHHHHHHHHhhcccccCceEEEe-----CcHHHHHHHHHHh---c-cCCeEEeccCCCCCCCCcCCcCC---HHHH
Confidence 56677766666644 11 1234331 3344444444433 3 2455443 245555 5678
Q ss_pred HHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHH-----H-HHHHHh----c
Q psy8190 165 KKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAE-----L-IFQLAN----L 234 (348)
Q Consensus 165 k~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~-----~-l~~l~~----l 234 (348)
+++|++.+.+|- ...+.+. +-+-+.+-+-++.+.++|+.+ |+=.|||.+++.. . ...+.. +
T Consensus 84 ~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~vv~~Ql~~~l~~~ 154 (248)
T 1o5x_A 84 KDLNIEYVIIGH----FERRKYF-HETDEDVREKLQASLKNNLKA----VVCFGESLEQREQNKTIEVITKQVKAFVDLI 154 (248)
T ss_dssp HHTTCCEEEECC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHTTGGGC
T ss_pred HHcCCCEEEeCC----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCChHHHHHHHHHHHHhhh
Confidence 999999999875 2222221 346777788899999999964 3334788776522 1 111221 1
Q ss_pred CCCCCeeeccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-------Ccee-ccccccccchhhHHHHHHhCcc
Q psy8190 235 NPYPESVPINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMPT-------SRIR-MSAGRKEMGETTQAFCFLAGAN 304 (348)
Q Consensus 235 ~~~~~~i~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp~-------~~i~-~s~g~~~l~~~~~~~~l~~GAn 304 (348)
.+ ...+ +-.|-|. =||- ..++++..-++.+..|..+.. ..++ +.+|-.+-. +...+.-..++|
T Consensus 155 ~~-~~~~-vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~-N~~~l~~~~diD 227 (248)
T 1o5x_A 155 DN-FDNV-ILVYEPLWAIGTG----KTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTE-NCSSLIQQEDID 227 (248)
T ss_dssp CC-TTSE-EEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTT-THHHHHTSTTCC
T ss_pred hh-hcCE-EEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHH-HHHHHHcCCCCC
Confidence 10 0111 1122221 2443 457899999999999976432 1233 234333322 333333348899
Q ss_pred eeeeCC
Q psy8190 305 SIFYGD 310 (348)
Q Consensus 305 ~~~~~~ 310 (348)
+++.|.
T Consensus 228 G~LVGg 233 (248)
T 1o5x_A 228 GFLVGN 233 (248)
T ss_dssp EEEECG
T ss_pred eeEeeH
Confidence 987765
No 428
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A*
Probab=46.77 E-value=41 Score=32.69 Aligned_cols=55 Identities=13% Similarity=0.170 Sum_probs=40.7
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+|.++.|+++|++.+.+++ +=.+++..=....+ ++-.-+.++.+++.|+.+.+++
T Consensus 131 ~eDi~lm~~lG~~~~RfsI-sWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL 188 (565)
T 2dga_A 131 EEDVKALKDMGMKVYRFSI-SWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTI 188 (565)
T ss_dssp HHHHHHHHHHTCSEEEEEC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEecc-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 5899999999999999988 31344443211224 7788889999999999876664
No 429
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4
Probab=46.39 E-value=41 Score=32.06 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccC--CCCC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDII--STRD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~--~~~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+|.++.|+++|++.+.+++ +=.+++..=. ...+ ++-.-+.++.+++.|+++.+++
T Consensus 76 ~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL 135 (490)
T 1cbg_A 76 KEDIGIMKDMNLDAYRFSI-SWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTL 135 (490)
T ss_dssp HHHHHHHHHTTCCEEEEEC-CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEecc-cHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 5889999999999999988 3145544321 1224 7788899999999999876654
No 430
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=46.38 E-value=1.2e+02 Score=24.76 Aligned_cols=98 Identities=14% Similarity=0.063 Sum_probs=63.6
Q ss_pred CCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC-----CCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCC
Q psy8190 115 ATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM-----LNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIST 189 (348)
Q Consensus 115 ~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~-----l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~ 189 (348)
++.+++.+|. . ..+.++++.+++.+..+.++++. -+++-++.|...+.+.+- .|
T Consensus 32 ~~~ifll~g~--I-----~~L~~iv~~ik~~gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGII---sT----------- 90 (188)
T 1vkf_A 32 PDVVFLLKSD--I-----LNLKFHLKILKDRGKTVFVDMDFVNGLGEGEEAILFVKKAGADGII---TI----------- 90 (188)
T ss_dssp SSEEEECCEE--T-----TTHHHHHHHHHHTTCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEE---ES-----------
T ss_pred CCEEEEEeCc--H-----HHHHHHHHHHHHCCCeEEEecCcccccCCCHHHHHHHHhcCCCEEE---cC-----------
Confidence 5667777762 2 23788888898888888887652 355667777666877664 11
Q ss_pred CCHHHHHHHHHHHHHcCCeee-EeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 190 RDYENRLNTLKNVRNVGINIC-CGGIIGLSESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 190 ~~~~~~~~~i~~~~~~G~~i~-~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
....+..+++.|+.+- -.+++ .-..+...++.+.+.+ |+.+-+.
T Consensus 91 -----k~~~i~~Akk~GL~tIqR~Fli----Ds~al~~~~~~I~~~k--PD~iEiL 135 (188)
T 1vkf_A 91 -----KPKNYVVAKKNGIPAVLRFFAL----DSKAVERGIEQIETLG--VDVVEVL 135 (188)
T ss_dssp -----CHHHHHHHHHTTCCEEEEEECC----SHHHHHHHHHHHHHHT--CSEEEEE
T ss_pred -----cHHHHHHHHHcCCEEeeEEEEE----EeHHHhhhhhhccccC--CCeEeec
Confidence 2245788999999643 22222 1144566677777777 8886655
No 431
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A*
Probab=46.32 E-value=44 Score=32.48 Aligned_cols=55 Identities=16% Similarity=0.195 Sum_probs=41.1
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccC--CCCC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDII--STRD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~--~~~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+|.++.|+++|++.+.+++ +=.+++..=. ...+ ++-.-+.++.+++.|+++.+++
T Consensus 133 ~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL 192 (565)
T 1v02_A 133 AEDVRLLKEMGMDAYRFSI-SWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITI 192 (565)
T ss_dssp HHHHHHHHHTTCSEEEEEC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEccc-CHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 5899999999999999988 3145554321 1224 7788899999999999876654
No 432
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=46.30 E-value=20 Score=35.36 Aligned_cols=60 Identities=8% Similarity=-0.010 Sum_probs=44.5
Q ss_pred HHHHHHHHhCCCeeeccCC--C---CHHHH-----hccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec-C
Q psy8190 159 NQAYRLKKVGLDYYNHNLD--T---SPKLY-----GDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL-S 218 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g~e--t---~~e~l-----~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-g 218 (348)
+.+..|++.|++.|.+..= . ..--| -.+.+. .+.++..+.++.+|+.|+.|..++++.+ +
T Consensus 158 ~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 229 (618)
T 3m07_A 158 AKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFG 229 (618)
T ss_dssp TTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred HHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccCC
Confidence 5688999999999987521 1 11112 234433 3789999999999999999999999987 5
No 433
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=46.26 E-value=1.8e+02 Score=26.78 Aligned_cols=140 Identities=10% Similarity=0.138 Sum_probs=79.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcC--c-------------------------EEE
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIG--L-------------------------ETC 150 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~--~-------------------------~i~ 150 (348)
.+.+.-++++..+.+.|..-|.+.- |.....+.+.++.+++...+ + .+.
T Consensus 35 ~Dv~aTv~QI~~L~~aG~eiVRvaV----p~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiR 110 (406)
T 4g9p_A 35 RDVEATTAQVLELHRAGSEIVRLTV----NDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFR 110 (406)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEC----CSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEE
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEec----CCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcc
Confidence 5677777888888888988887742 33445566666666654321 1 234
Q ss_pred EecCCCC-----H----HHHHHHHHhCC-CeeeccCCC-CHHHHhccC------C-CCC---------HHHHHHHHHHHH
Q psy8190 151 LTLGMLN-----E----NQAYRLKKVGL-DYYNHNLDT-SPKLYGDII------S-TRD---------YENRLNTLKNVR 203 (348)
Q Consensus 151 ~~~g~l~-----~----e~l~~Lk~aG~-~~i~~g~et-~~e~l~~i~------~-~~~---------~~~~~~~i~~~~ 203 (348)
+|||.+. + +.++..++.|. -||-++-.| +++++.++. + +.+ .+-.++.++.+.
T Consensus 111 INPGNig~~~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~ 190 (406)
T 4g9p_A 111 INPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAAL 190 (406)
T ss_dssp ECTTSSCSTHHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccCccccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHH
Confidence 5788774 2 35566667775 455555666 677776552 1 111 223334455566
Q ss_pred HcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeee
Q psy8190 204 NVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVP 242 (348)
Q Consensus 204 ~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~ 242 (348)
+.||... .+++-+ -.+..+.++..+.+.+.-++|-|++
T Consensus 191 ~~~f~~~-~iviS~KaSdv~~~i~aYr~la~~~dyPLHLG 229 (406)
T 4g9p_A 191 EMGLGED-KLVLSAKVSKARDLVWVYRELARRTQAPLHLG 229 (406)
T ss_dssp HHTCCGG-GEEEEEECSSHHHHHHHHHHHHHHCCSCBEEC
T ss_pred HcCCChh-heEEEeecCCHHHHHHHHHHHHHhCCCCceee
Confidence 6676321 345555 5566666677666665432333433
No 434
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=46.20 E-value=1.6e+02 Score=26.06 Aligned_cols=135 Identities=11% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHhCCCCEEEEec-------cCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCC------HHHHHHHHHhCCCee
Q psy8190 107 AQKAKSDGATRFCMGA-------AWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLN------ENQAYRLKKVGLDYY 172 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~g-------g~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~------~e~l~~Lk~aG~~~i 172 (348)
++.+.+.|++-++++| |-.+....+.+.+...++.+.+ .+.++.+....-. .+.++.|.++|+..|
T Consensus 42 A~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv 121 (305)
T 3ih1_A 42 ALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAV 121 (305)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEE
Q ss_pred eccCCCCHHHHhccCCCC--CHHHHHHHHHHHHHcCCeeeEeEeeec--CCCHHHHHHHHHHHHhcCCCCCeeec
Q psy8190 173 NHNLDTSPKLYGDIISTR--DYENRLNTLKNVRNVGINICCGGIIGL--SESRDQRAELIFQLANLNPYPESVPI 243 (348)
Q Consensus 173 ~~g~et~~e~l~~i~~~~--~~~~~~~~i~~~~~~G~~i~~~~i~Gl--get~e~~~~~l~~l~~l~~~~~~i~~ 243 (348)
.+-=++.+..--.+..+. +.++..+.|+.++++|..+.+.-=.-- .+..++.++-.....+.+ .+.|-+
T Consensus 122 ~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAG--AD~i~~ 194 (305)
T 3ih1_A 122 QIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAG--ADAIFP 194 (305)
T ss_dssp EEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHT--CSEEEE
T ss_pred EECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcC--CCEEEE
No 435
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=46.10 E-value=1.3e+02 Score=25.21 Aligned_cols=96 Identities=17% Similarity=0.070 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8190 194 NRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVAR 273 (348)
Q Consensus 194 ~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R 273 (348)
+=+++++.+.+.|++++.+++|.. .+.+ ...+.+ ...++ ||+ | ++.+..........+++.+.+
T Consensus 92 eGl~A~~~L~~~GI~vn~TlifS~----~QA~----~Aa~AG--a~yIS--Pfv---g-Ri~d~g~dG~~~v~~i~~~~~ 155 (223)
T 3s1x_A 92 DGLRAIKTLSSEHINTNCTLVFNP----IQAL----LAAKAG--VTYVS--PFV---G-RLDDIGEDGMQIIDMIRTIFN 155 (223)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECSH----HHHH----HHHHTT--CSEEE--EBS---H-HHHHTTSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEEeCCH----HHHH----HHHHcC--CeEEE--eec---c-hHhhcCCCHHHHHHHHHHHHH
Confidence 467888888899999999999965 3222 233455 44442 232 1 122233445566777888777
Q ss_pred HHCCCCce-eccccccccchhhHHHHHHhCcceeeeC
Q psy8190 274 ITMPTSRI-RMSAGRKEMGETTQAFCFLAGANSIFYG 309 (348)
Q Consensus 274 ~~lp~~~i-~~s~g~~~l~~~~~~~~l~~GAn~~~~~ 309 (348)
..-.+..| .+|- |+ ...-..+..+||+.+...
T Consensus 156 ~~~~~T~IlaAS~-Rn---~~~v~~aa~~G~d~~Tip 188 (223)
T 3s1x_A 156 NYIIKTQILVASI-RN---PIHVLRSAVIGADVVTVP 188 (223)
T ss_dssp HTTCCSEEEEBSC-CS---HHHHHHHHHHTCSEEEEC
T ss_pred HcCCCCEEEEEeC-CC---HHHHHHHHHcCCCEEEeC
Confidence 75444444 3332 21 122233568999998443
No 436
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=45.81 E-value=50 Score=28.57 Aligned_cols=14 Identities=21% Similarity=-0.078 Sum_probs=7.9
Q ss_pred cCCCCCHHHHHHhh
Q psy8190 25 QSLIWKLDEVINLF 38 (348)
Q Consensus 25 ~~~~ls~~e~~~Ll 38 (348)
.+...|.++...|.
T Consensus 21 L~p~~t~~~i~~lc 34 (260)
T 1p1x_A 21 LNDDDTDEKVIALC 34 (260)
T ss_dssp CCTTCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHH
Confidence 34455666666654
No 437
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=45.81 E-value=12 Score=35.07 Aligned_cols=28 Identities=21% Similarity=0.350 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEeeec
Q psy8190 190 RDYENRLNTLKNVRNVGINICCGGIIGL 217 (348)
Q Consensus 190 ~~~~~~~~~i~~~~~~G~~i~~~~i~Gl 217 (348)
.+.++..+.++.||+.||.|-.++++.+
T Consensus 74 Gt~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 3899999999999999999999999988
No 438
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=45.70 E-value=56 Score=29.57 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=55.7
Q ss_pred cCHHHHHHHHHHH-----HhCCCCEEEEeccCCCCC-----------cccHHHHHHHHHHHHhcCcEEEE--ecCC----
Q psy8190 98 LSIESVITAAQKA-----KSDGATRFCMGAAWRELK-----------DRDLDNIENMICEVKKIGLETCL--TLGM---- 155 (348)
Q Consensus 98 ~~~eei~~~~~~~-----~~~G~~~i~l~gg~~~~~-----------~~~~~~~~~l~~~i~~~~~~i~~--~~g~---- 155 (348)
.+.+.+++.++.+ .+.|+..|.|-.|+.... ..-++.+..+++.+++.|+.+.+ +++.
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~~~~~~~~~ 102 (362)
T 1uas_A 23 INEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCS 102 (362)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEeEEEeeCCCcccc
Confidence 5678888888888 677899998877653210 00112488899999988877543 4432
Q ss_pred ------CC--HHHHHHHHHhCCCeeeccCCC
Q psy8190 156 ------LN--ENQAYRLKKVGLDYYNHNLDT 178 (348)
Q Consensus 156 ------l~--~e~l~~Lk~aG~~~i~~g~et 178 (348)
.. +..++.+++.|++.|-+....
T Consensus 103 ~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~ 133 (362)
T 1uas_A 103 NKMPGSLDHEEQDVKTFASWGVDYLKYDNCN 133 (362)
T ss_dssp SSSBCCTTCHHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEECccC
Confidence 11 457888999999999886543
No 439
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=45.65 E-value=75 Score=28.04 Aligned_cols=59 Identities=10% Similarity=0.052 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCC----CCHHHHHHHHHHHHHcCCeeeEeEee
Q psy8190 156 LNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIST----RDYENRLNTLKNVRNVGINICCGGII 215 (348)
Q Consensus 156 l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~----~~~~~~~~~i~~~~~~G~~i~~~~i~ 215 (348)
.+++.++.|+++|++.|-+.+.-. .+...-.++ ...+.+.+.++.|++.|+.+..++-.
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~-~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYP-IIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGG-GTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHH-HhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 668899999999999988765310 000000001 13556678899999999987766443
No 440
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=45.45 E-value=1.7e+02 Score=26.32 Aligned_cols=160 Identities=14% Similarity=0.127 Sum_probs=78.4
Q ss_pred HHHHHHhCCCeeeccCCC-C--HHHHhcc---CC---CCCHHHH----HHHHHHHHHc-C--CeeeEeEeee----cC-C
Q psy8190 161 AYRLKKVGLDYYNHNLDT-S--PKLYGDI---IS---TRDYENR----LNTLKNVRNV-G--INICCGGIIG----LS-E 219 (348)
Q Consensus 161 l~~Lk~aG~~~i~~g~et-~--~e~l~~i---~~---~~~~~~~----~~~i~~~~~~-G--~~i~~~~i~G----lg-e 219 (348)
.+..+++|+|.|.+..-. - .+.+.-. +. +.+.+.+ ++.++.++++ | +.+.+-+-.. -| .
T Consensus 164 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~ 243 (363)
T 3l5l_A 164 ARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQ 243 (363)
T ss_dssp HHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHH
T ss_pred HHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCC
Confidence 455667899999875432 1 3333321 11 2356654 5666777663 3 3333222111 12 4
Q ss_pred CHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHH
Q psy8190 220 SRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCF 299 (348)
Q Consensus 220 t~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l 299 (348)
+.++..+.++.+.+.+ ++.+.++.-...+..... ..+. ..+..+...|..+. .-+-..++-. ..+.....+
T Consensus 244 ~~~~~~~la~~L~~~G--vd~i~vs~g~~~~~~~~~-~~~~---~~~~~~~~ir~~~~-iPVi~~GgI~--s~e~a~~~l 314 (363)
T 3l5l_A 244 TLEESIELARRFKAGG--LDLLSVSVGFTIPDTNIP-WGPA---FMGPIAERVRREAK-LPVTSAWGFG--TPQLAEAAL 314 (363)
T ss_dssp HHHHHHHHHHHHHHTT--CCEEEEEECCCSSCCCCC-CCTT---TTHHHHHHHHHHHT-CCEEECSSTT--SHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEecCccccccccC-CCcc---hhHHHHHHHHHHcC-CcEEEeCCCC--CHHHHHHHH
Confidence 5677788888888887 888776642211111110 1111 11233333443332 1222222211 244556678
Q ss_pred HhC-cceeeeCCeeccCCCCCchHHHHHHHHcCCC
Q psy8190 300 LAG-ANSIFYGDKLLTTDNTKTNDDSKLLKKLGIN 333 (348)
Q Consensus 300 ~~G-An~~~~~~~~~~~~g~~~~~~~~~i~~~G~~ 333 (348)
..| |+.+..|--++ ..++-..++.+.+|..
T Consensus 315 ~~G~aD~V~iGR~~l----anPdl~~k~~~~lg~~ 345 (363)
T 3l5l_A 315 QANQLDLVSVGRAHL----ADPHWAYFAAKELGVE 345 (363)
T ss_dssp HTTSCSEEECCHHHH----HCTTHHHHHHHHTTCT
T ss_pred HCCCccEEEecHHHH----hCchHHHHHHHHcCCC
Confidence 888 77776553221 1134456677777754
No 441
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=45.27 E-value=20 Score=33.17 Aligned_cols=57 Identities=11% Similarity=0.117 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHhCCCeeeccCCCCHHHHhcc--CC--CCCHHHHHHHHHHHHHcCCeeeEeE
Q psy8190 155 MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDI--IS--TRDYENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 155 ~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i--~~--~~~~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
-++++.++.|+++|++.|-+.+.-- .+... .+ ....+...++++.|++.|+.|.+++
T Consensus 73 ~ite~D~~~ik~~G~N~VRipi~~~--~~~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 73 WITEQDFKQISNLGLNFVRIPIGYW--AFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HSCHHHHHHHHHTTCCEEEEEEEGG--GTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCcHHHHHHHHHcCCCEEEEcccHH--HccCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEe
Confidence 4788999999999999888766320 01000 01 0246777888999999999877664
No 442
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=45.27 E-value=98 Score=28.42 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=45.9
Q ss_pred HHHHHHhCCCCEEEEeccC-CCC--CcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 106 AAQKAKSDGATRFCMGAAW-REL--KDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~-~~~--~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.++.+.+.|+..|.+++.+ ... .....+.+.++.+.+.. .+++.++.|..+.+.+......|.+.+.+|
T Consensus 265 ~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~-~ipVia~GGI~~g~Dv~kalalGAd~V~iG 336 (392)
T 2nzl_A 265 DAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEG-KVEVFLDGGVRKGTDVLKALALGAKAVFVG 336 (392)
T ss_dssp HHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTT-SSEEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCC-CCEEEEECCCCCHHHHHHHHHhCCCeeEEC
Confidence 3556678899999885532 111 11234445555444432 588989999999888777777999998875
No 443
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=45.22 E-value=1.7e+02 Score=26.31 Aligned_cols=126 Identities=8% Similarity=-0.024 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHHhC-CCC-EEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeec-c
Q psy8190 99 SIESVITAAQKAKSD-GAT-RFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNH-N 175 (348)
Q Consensus 99 ~~eei~~~~~~~~~~-G~~-~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~-g 175 (348)
+++..++.++.+++. |-. .+.+ .. + ...+.+...++++.+.+.++ +.=.+-. +.+.++.+++.- .+.+ .
T Consensus 171 ~~~~~~e~v~avr~a~g~d~~l~v-Da--n-~~~~~~~a~~~~~~l~~~~i-~iE~P~~-~~~~~~~l~~~~--~iPI~~ 242 (379)
T 2rdx_A 171 DWQSDIDRIRACLPLLEPGEKAMA-DA--N-QGWRVDNAIRLARATRDLDY-ILEQPCR-SYEECQQVRRVA--DQPMKL 242 (379)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEE-EC--T-TCSCHHHHHHHHHHTTTSCC-EEECCSS-SHHHHHHHHTTC--CSCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEE-EC--C-CCCCHHHHHHHHHHHHhCCe-EEeCCcC-CHHHHHHHHhhC--CCCEEE
Confidence 455555666655542 432 2333 22 1 12356777778888777777 3322323 667777777652 2333 2
Q ss_pred CCC--CHHHHhc-------------cCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcC
Q psy8190 176 LDT--SPKLYGD-------------IISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLN 235 (348)
Q Consensus 176 ~et--~~e~l~~-------------i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~ 235 (348)
-|+ +.+.++. +.+-....+.++..+.+++.|+.+..+- ..|+.-.+...+.....+.
T Consensus 243 de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~---~~es~i~~~a~~~laaa~~ 314 (379)
T 2rdx_A 243 DECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED---SWGGEIASAAVAHFAASTP 314 (379)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC---SBCSHHHHHHHHHHHHTSC
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee---ccCcHHHHHHHHHHHHcCC
Confidence 233 2332221 1122378899999999999999876552 3567666666777666664
No 444
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=45.20 E-value=86 Score=29.19 Aligned_cols=109 Identities=18% Similarity=0.193 Sum_probs=54.4
Q ss_pred cCHHHHH----HHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcE---EEEecCCCCHHHHHHHHHhCCC
Q psy8190 98 LSIESVI----TAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE---TCLTLGMLNENQAYRLKKVGLD 170 (348)
Q Consensus 98 ~~~eei~----~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~---i~~~~g~l~~e~l~~Lk~aG~~ 170 (348)
.+.++++ +.++.+++.|.. +.+... +.+..+.+++.++++.+.+.|.. ++=+.|..++..+..+-++=..
T Consensus 144 ~s~~e~l~~~~~~v~~ak~~G~~-V~~~~e--da~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~ 220 (423)
T 3ivs_A 144 KDMTYIIDSATEVINFVKSKGIE-VRFSSE--DSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRG 220 (423)
T ss_dssp ---CHHHHHHHHHHHHHHTTTCE-EEEEEE--SGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCE-EEEEEc--cCcCCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHh
Confidence 3444444 445556666754 444322 22345778889999888876542 3335787887655444332111
Q ss_pred e--eeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCC
Q psy8190 171 Y--YNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSE 219 (348)
Q Consensus 171 ~--i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glge 219 (348)
. +.++ +|...++...+.....+-++|....-+-+.|+||
T Consensus 221 ~~~~~i~----------~H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlGE 261 (423)
T 3ivs_A 221 VVSCDIE----------CHFHNDTGMAIANAYCALEAGATHIDTSILGIGE 261 (423)
T ss_dssp HCSSEEE----------EEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS
T ss_pred hcCCeEE----------EEECCCCchHHHHHHHHHHhCCCEEEEecccccC
Confidence 1 1221 1211122233333344455788644444788875
No 445
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=45.19 E-value=12 Score=37.26 Aligned_cols=34 Identities=6% Similarity=-0.030 Sum_probs=29.0
Q ss_pred hccCCC-CCHHHHHHHHHHHHHcCCeeeEeEeeec
Q psy8190 184 GDIIST-RDYENRLNTLKNVRNVGINICCGGIIGL 217 (348)
Q Consensus 184 ~~i~~~-~~~~~~~~~i~~~~~~G~~i~~~~i~Gl 217 (348)
..+.+. .+.++..+.++.||+.|++|..++++.+
T Consensus 107 ~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~V~NH 141 (683)
T 3bmv_A 107 KRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNH 141 (683)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTE
T ss_pred cccCcccCCHHHHHHHHHHHHHCCCEEEEEEcccc
Confidence 345553 3899999999999999999999999988
No 446
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A
Probab=45.03 E-value=47 Score=31.98 Aligned_cols=55 Identities=11% Similarity=0.131 Sum_probs=41.1
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccC--CCCC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDII--STRD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~--~~~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+|.++.|+++|++.+.+++ +=.+++..=. ...+ ++-.-+.++.+++.||.+.+++
T Consensus 100 ~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL 159 (532)
T 2jf7_A 100 KEDIKIMKQTGLESYRFSI-SWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTL 159 (532)
T ss_dssp HHHHHHHHHHTCSEEEEEC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCeEeccc-cHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 5899999999999999988 3145554321 1224 7788889999999999876654
No 447
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4
Probab=45.00 E-value=48 Score=31.36 Aligned_cols=55 Identities=9% Similarity=0.117 Sum_probs=39.8
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccC-CCCCH---HHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDII-STRDY---ENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~-~~~~~---~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+|.++.|+++|++.+.+++ +=.+++..=. ...+. +-.-+.++.+++.|+.+.+++
T Consensus 62 ~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL 120 (464)
T 1wcg_A 62 KEDVAIIKDLNLKFYRFSI-SWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTM 120 (464)
T ss_dssp HHHHHHHHHHTCSEEEEEC-CHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEecc-cHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 5889999999999999988 3145544321 12244 566788999999999876664
No 448
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=44.85 E-value=90 Score=27.70 Aligned_cols=158 Identities=12% Similarity=0.132 Sum_probs=79.6
Q ss_pred cCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCee--eEeEeeecCC--------CHH
Q psy8190 153 LGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINI--CCGGIIGLSE--------SRD 222 (348)
Q Consensus 153 ~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i--~~~~i~Glge--------t~e 222 (348)
.|.++ ...|++.|++.+.+|- + |-...+ +-+-+.+-+-++.+.+.|+.+ |++-..--.| +.+
T Consensus 128 TGEIS---a~mLkd~G~~~ViiGH--S-ERR~~f--~Etde~V~~Kv~aAl~~GL~pIvCVGEtleere~~~~~~g~t~~ 199 (310)
T 3s6d_A 128 TGEIS---PVCLRDMNVSIVELGH--A-ERRAIF--GETDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEAIGRAVG 199 (310)
T ss_dssp TTCCC---HHHHHHTTCCEEEESC--H-HHHHHH--CCCHHHHHHHHHHHHHTTCEEEEEECCCSCCCSSHHHHHHHHHH
T ss_pred cccCC---HHHHHHcCCCEEEecc--c-cccccc--CCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHhhhhccccccHHH
Confidence 34455 5678999999999875 2 211111 346677778899999999953 4432221111 111
Q ss_pred HHHHHHHH-HHhcCCCCCeeeccccccc--CCCCCCCCCCCCHHHHHHHHHHHHHHCC----C--Cceec-cccccccch
Q psy8190 223 QRAELIFQ-LANLNPYPESVPINNLVQI--KGTPLYGSSILDPLEFIRTIAVARITMP----T--SRIRM-SAGRKEMGE 292 (348)
Q Consensus 223 ~~~~~l~~-l~~l~~~~~~i~~~~l~P~--~gT~l~~~~~~~~~~~~~~~a~~R~~lp----~--~~i~~-s~g~~~l~~ 292 (348)
.+..-+.. +..+. ...-.+..|-|. =||. ...+++..-++.+..|..+. . ..+++ .+|-.+-.
T Consensus 200 vv~~Ql~~~l~~l~--~~~~vVIAYEPVWAIGTG----k~Atpe~aqevh~~IR~~l~~~~~~~a~~vrILYGGSV~~~- 272 (310)
T 3s6d_A 200 ECEAQIRPVLEALP--RDAPVIFAYEPVWAIGKP----QPARVDHVGAVVSGIRSVIERIDRHRKGEVRILYGGSAGPG- 272 (310)
T ss_dssp HHHHHHHHHHHHSC--TTSCEEEEECCGGGC---------CCHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEEEECTT-
T ss_pred HHHHHHHHHHhcCC--cccceEEEECChhhccCC----CCCCHHHHHHHHHHHHHHHHHhhhcccCceeEEEcCccCHH-
Confidence 12222222 22233 111112223332 2443 35789999999998887652 1 23442 34333221
Q ss_pred hhHHHHHHhCcceeeeCCeeccCCCCCchHHHHHHHHc
Q psy8190 293 TTQAFCFLAGANSIFYGDKLLTTDNTKTNDDSKLLKKL 330 (348)
Q Consensus 293 ~~~~~~l~~GAn~~~~~~~~~~~~g~~~~~~~~~i~~~ 330 (348)
.....++..++|+++.|.- .-.+++..++++++
T Consensus 273 n~~~~~l~~dVDG~LVGgA-----SL~a~~F~~Ii~e~ 305 (310)
T 3s6d_A 273 LWGPGGLGKEVDGMFLGRF-----AHDIEGVRKVVREV 305 (310)
T ss_dssp TTTTTSGGGTCSEEEECGG-----GGSHHHHHHHHHHH
T ss_pred HHhhhcccCCCCEEEeehe-----eecHHHHHHHHHHH
Confidence 2333345688999877642 12345556666553
No 449
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=44.75 E-value=1.6e+02 Score=25.74 Aligned_cols=168 Identities=11% Similarity=0.003 Sum_probs=103.0
Q ss_pred HHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCC-CCHHHHhccCC-CCCHHHHHHHHHHHHH-cCCeeeEeE
Q psy8190 137 NMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLD-TSPKLYGDIIS-TRDYENRLNTLKNVRN-VGINICCGG 213 (348)
Q Consensus 137 ~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~e-t~~e~l~~i~~-~~~~~~~~~~i~~~~~-~G~~i~~~~ 213 (348)
..++.+++.+- ..+-++..+.-..+.+.++|++.+.++=- .+...+-.=.. .-+.++.+..++.+.+ ..+++.+++
T Consensus 11 ~~lr~l~~~~~-~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~ 89 (287)
T 3b8i_A 11 AMFRALLDSSR-CYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADA 89 (287)
T ss_dssp HHHHHHHHSSC-CEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred HHHHHHHhCCC-cEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence 34455554332 22346778888899999999999886411 11112221111 2489999999988776 567889999
Q ss_pred eeecCCCHHHHHHHHHHHHhcCCCCCeeeccc-ccccCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CCceecc--cccc
Q psy8190 214 IIGLSESRDQRAELIFQLANLNPYPESVPINN-LVQIKGTPLYGSSILDPLEFIRTIAVARITMP--TSRIRMS--AGRK 288 (348)
Q Consensus 214 i~Glget~e~~~~~l~~l~~l~~~~~~i~~~~-l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp--~~~i~~s--~g~~ 288 (348)
=.|+| +.++..++...+.+.+ ...+.+-- ..|..-.-+... ..+.++....+..++..-. +..|..- ....
T Consensus 90 d~Gyg-~~~~~~~~v~~l~~aG--a~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~ 165 (287)
T 3b8i_A 90 DHGYG-NALNVMRTVVELERAG--IAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVDPALTIIARTNAELI 165 (287)
T ss_dssp TTCSS-SHHHHHHHHHHHHHHT--CSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTS
T ss_pred CCCCC-CHHHHHHHHHHHHHhC--CeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhc
Confidence 99977 8999999999998887 66666532 123322223334 6788888888888877643 3223211 1100
Q ss_pred ccc--hhhHHHHHHhCcceeeeC
Q psy8190 289 EMG--ETTQAFCFLAGANSIFYG 309 (348)
Q Consensus 289 ~l~--~~~~~~~l~~GAn~~~~~ 309 (348)
.+. -.-......+||+.++.+
T Consensus 166 gl~~ai~Ra~ay~eAGAd~i~~e 188 (287)
T 3b8i_A 166 DVDAVIQRTLAYQEAGADGICLV 188 (287)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEec
Confidence 000 112233456899999764
No 450
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=44.68 E-value=1.7e+02 Score=26.14 Aligned_cols=95 Identities=11% Similarity=0.027 Sum_probs=56.7
Q ss_pred cccHHHHHHHHHHHHhcCcE---EEEecC---CCCHHHHHHHHHh----CCCeeec--cCCCCHHHHhccCCCCCHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLE---TCLTLG---MLNENQAYRLKKV----GLDYYNH--NLDTSPKLYGDIISTRDYENRL 196 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~---i~~~~g---~l~~e~l~~Lk~a----G~~~i~~--g~et~~e~l~~i~~~~~~~~~~ 196 (348)
..+.+.+.++++.+.+.|+. ++-+.| .++.++-..+.+. --.++.+ |+. ..+.++.+
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-----------~~st~eai 116 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-----------GTNARETI 116 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-----------SSCHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-----------CCCHHHHH
Confidence 46788899999888776543 333444 4666544333332 1123222 221 23677888
Q ss_pred HHHHHHHHcCCeee-EeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 197 NTLKNVRNVGINIC-CGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 197 ~~i~~~~~~G~~i~-~~~i~Glget~e~~~~~l~~l~~l 234 (348)
+..+.+.++|..-. +.-.|-..-+.+++.++++.+.+-
T Consensus 117 ~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a 155 (343)
T 2v9d_A 117 ELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADS 155 (343)
T ss_dssp HHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 88888889887532 222222245888999998888764
No 451
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=44.67 E-value=1.5e+02 Score=27.25 Aligned_cols=81 Identities=12% Similarity=0.102 Sum_probs=51.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEE--eccCCCC--------CcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHh
Q psy8190 98 LSIESVITAAQKAKSDGATRFCM--GAAWREL--------KDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKV 167 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l--~gg~~~~--------~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~a 167 (348)
.+++++.+.++...+.|...|-+ .|+...+ ...+.+.+.++++..++.++.+.++.. ..+.++...++
T Consensus 182 ~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~--~~~~i~~~~~~ 259 (458)
T 2p9b_A 182 GTPEEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQ--SPEGVRRSLLA 259 (458)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCEEEEEC--SHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeEEEEeC--CHHHHHHHHHc
Confidence 35677777777666667665533 2221111 123567888899988888887776654 35566777788
Q ss_pred CCCeeeccCCCCH
Q psy8190 168 GLDYYNHNLDTSP 180 (348)
Q Consensus 168 G~~~i~~g~et~~ 180 (348)
|.+++.++.-.++
T Consensus 260 G~~~i~H~~~~~~ 272 (458)
T 2p9b_A 260 GVDTIEHGSVLDD 272 (458)
T ss_dssp TCSEEEECCCCCH
T ss_pred CCCEEEECCCCCH
Confidence 9988887654443
No 452
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=44.66 E-value=4.6 Score=34.61 Aligned_cols=72 Identities=15% Similarity=0.009 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 102 SVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 102 ei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
+..+.++.+.+.|+..|++++-...... ...-.++++.+++ .++++.++.|..+.+.+..+.++|++.+.++
T Consensus 157 ~~~~~a~~~~~~G~~~i~~t~~~~~g~~--~g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg 229 (247)
T 3tdn_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGTK--SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSIN 229 (247)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEecccCCCCc--CCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcCCcHhhcc
Confidence 3344455566678888877553111000 0111345555554 3677777788888999999999999998875
No 453
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=44.63 E-value=1.4e+02 Score=25.23 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=43.2
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe-Ee-e--ec-CCCH-------HHHH
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCG-GI-I--GL-SESR-------DQRA 225 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~-~i-~--Gl-get~-------e~~~ 225 (348)
++.++.++++|++.|.+.... + +..+.++..+.-+.+++.|+.+.+. .. + .+ ..+. +.+.
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~----~----~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~ 91 (294)
T 3vni_A 20 KYYIEKVAKLGFDILEIAASP----L----PFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYT 91 (294)
T ss_dssp HHHHHHHHHHTCSEEEEESTT----G----GGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCcc----c----CCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHH
Confidence 567888888888888766532 1 1124555566666677788876552 11 1 12 2222 3445
Q ss_pred HHHHHHHhcCCCCCeee
Q psy8190 226 ELIFQLANLNPYPESVP 242 (348)
Q Consensus 226 ~~l~~l~~l~~~~~~i~ 242 (348)
+.++.+..++ ...+.
T Consensus 92 ~~i~~a~~lG--~~~v~ 106 (294)
T 3vni_A 92 DLLKRLYKLD--VHLIG 106 (294)
T ss_dssp HHHHHHHHHT--CCEEE
T ss_pred HHHHHHHHhC--CCeee
Confidence 5666667777 55553
No 454
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=44.51 E-value=84 Score=27.21 Aligned_cols=127 Identities=13% Similarity=0.138 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecC-----CC---CH-----------H
Q psy8190 99 SIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLG-----ML---NE-----------N 159 (348)
Q Consensus 99 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g-----~l---~~-----------e 159 (348)
+.++ + +.+.+.|++.|-+.... +.......+.++.+.+++.++.+....+ .+ ++ .
T Consensus 38 ~l~~-l---~~~~~~G~~~vEl~~~~--~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~ 111 (309)
T 2hk0_A 38 FGPY-I---EKVAKLGFDIIEVAAHH--INEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFER 111 (309)
T ss_dssp SHHH-H---HHHHHTTCSEEEEEHHH--HTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHH
T ss_pred cHHH-H---HHHHHhCCCEEEeccCC--ccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4555 4 44567799998776531 1111224566666777778888766421 11 22 2
Q ss_pred HHHHHHHhCCCeeeccCCCCHHHH-hcc-CCCCCH----HHHHHHHHHHHHcCCeeeEeEee---ec-CCCHHHHHHHHH
Q psy8190 160 QAYRLKKVGLDYYNHNLDTSPKLY-GDI-ISTRDY----ENRLNTLKNVRNVGINICCGGII---GL-SESRDQRAELIF 229 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~et~~e~l-~~i-~~~~~~----~~~~~~i~~~~~~G~~i~~~~i~---Gl-get~e~~~~~l~ 229 (348)
.++..++.|+..|.+..-+....+ ... .....+ +...+..+.+.+.|+.+...-+- +. ..|.++..+.++
T Consensus 112 ~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 191 (309)
T 2hk0_A 112 TLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRFENHVLNTAAEGVAFVK 191 (309)
T ss_dssp HHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeecccccccccCCHHHHHHHHH
Confidence 344455669888864321000000 000 000011 22233345566779887766552 22 567777666554
Q ss_pred HH
Q psy8190 230 QL 231 (348)
Q Consensus 230 ~l 231 (348)
.+
T Consensus 192 ~v 193 (309)
T 2hk0_A 192 DV 193 (309)
T ss_dssp HH
T ss_pred Hc
Confidence 44
No 455
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=44.41 E-value=1.2e+02 Score=27.89 Aligned_cols=76 Identities=14% Similarity=0.162 Sum_probs=49.3
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCC---CCcccHHHHHHHHHHHHhc---CcEEEEec-CCCCHH----HHHHHHH
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRE---LKDRDLDNIENMICEVKKI---GLETCLTL-GMLNEN----QAYRLKK 166 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~---~~~~~~~~~~~l~~~i~~~---~~~i~~~~-g~l~~e----~l~~Lk~ 166 (348)
.+++++.+.++.+.+.|++.|-+.|.... ....+++.-.+.++.+++. ++.+.+.. +..+.+ .++.|.+
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~ 203 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEP 203 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHh
Confidence 46899999999999999999988543110 0112355667788888863 45555532 344544 3566677
Q ss_pred hCCCeee
Q psy8190 167 VGLDYYN 173 (348)
Q Consensus 167 aG~~~i~ 173 (348)
+|+..+.
T Consensus 204 ~~i~~iE 210 (405)
T 3rr1_A 204 YRPLFIE 210 (405)
T ss_dssp GCCSCEE
T ss_pred cCCCEEE
Confidence 7887776
No 456
>3fj0_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase; HET: BGC; 1.15A {Uncultured bacterium} PDB: 3cmj_A 3fiz_A* 3fiy_A*
Probab=44.17 E-value=48 Score=31.35 Aligned_cols=56 Identities=11% Similarity=0.113 Sum_probs=40.0
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCH---HHHHHHHHHHHHcCCeeeEeEe
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDY---ENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~---~~~~~~i~~~~~~G~~i~~~~i 214 (348)
+|.++.|+++|++.+.+++ +=.+++..=...-+. +-.-+.++.+++.|+.+.+++.
T Consensus 82 ~eDi~lm~~lG~~~~R~si-sW~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~pivtL~ 140 (465)
T 3fj0_A 82 EQDLDLMRQLGLKTYRFSI-AWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLY 140 (465)
T ss_dssp HHHHHHHHHHTCSEEEEEC-CHHHHCCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEccC-CHHHeeeCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 6899999999999999887 213444431111244 6678889999999998766643
No 457
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4
Probab=44.14 E-value=50 Score=31.05 Aligned_cols=57 Identities=16% Similarity=0.247 Sum_probs=40.7
Q ss_pred CHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCH---HHHHHHHHHHHHcCCeeeEeEe
Q psy8190 157 NENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDY---ENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 157 ~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~---~~~~~~i~~~~~~G~~i~~~~i 214 (348)
-+|.++.|+++|++.+.+++ +=.+++..=....+. +-.-+.++.+++.|+.+.+++.
T Consensus 60 ~~eDi~lm~~~G~~~~R~si-~W~ri~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~ 119 (449)
T 1qox_A 60 VEEDVQLLKDLGVKVYRFSI-SWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLY 119 (449)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHhcCCCeEEecC-cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeC
Confidence 37899999999999999887 314454431111244 5667889999999998777653
No 458
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=44.01 E-value=2e+02 Score=26.79 Aligned_cols=112 Identities=8% Similarity=0.054 Sum_probs=69.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecC-CCCHHHHHHHHHhC-CCeeec
Q psy8190 97 ILSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLG-MLNENQAYRLKKVG-LDYYNH 174 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g-~l~~e~l~~Lk~aG-~~~i~~ 174 (348)
.++++|+++..+.+.+. +.-++|-.. ....+++.+.++-+.+. .+.+...-- ..+.+.++.+.+.| ++.+.+
T Consensus 278 ~~t~~elid~y~~lle~-ypI~~IEDP---l~~dD~eg~a~Lt~~lg--~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlI 351 (441)
T 3qtp_A 278 VKDVDGLIAEYVDYGKH-YPIASIEDP---FAEDDWAAWNKFTVEHG--NFQIVGDDLLVTNPARVQMAMDKNACNSVLI 351 (441)
T ss_dssp EECHHHHHHHHHHHHHH-SCEEEEESC---SCTTCHHHHHHHHHHTT--TSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred ccCHHHHHHHHHHHhhh-cceeeecCC---CChHHHHHHHHHHHhcC--CceEEeccccccCHHHHHHHHHcCCCCEEEe
Confidence 47899999888775442 334444322 22346666666666542 355533211 23577777776665 455554
Q ss_pred cCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec--CCCHHHHHHHH
Q psy8190 175 NLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL--SESRDQRAELI 228 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl--get~e~~~~~l 228 (348)
. +..-.+..+.+++++.++.+|+.+ |+|+ |||.+.+..+|
T Consensus 352 K----------vnqiGGITEalkaa~lA~~~G~~v----mvsHrsgETeDt~iAdL 393 (441)
T 3qtp_A 352 K----------VNQIGTLTETFKTIKMAQEKGWGV----MASHRSGETEDTFIADL 393 (441)
T ss_dssp C----------GGGTCCHHHHHHHHHHHHHTTCEE----EEECCSSCCSCCHHHHH
T ss_pred c----------ccccccHHHHHHHHHHHHHcCCeE----EEeCCCCCccHhHHHHH
Confidence 2 233358889999999999999875 5555 89987766555
No 459
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=43.91 E-value=2.3e+02 Score=27.30 Aligned_cols=130 Identities=15% Similarity=0.101 Sum_probs=68.9
Q ss_pred CHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcCC
Q psy8190 157 NENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLNP 236 (348)
Q Consensus 157 ~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~~ 236 (348)
+.+.++.|.++|+|.+-+..-. +| .+..++.++.+++..- ...+|.|---|.+...+. .+.+
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ah----------Gh-s~~v~~~i~~ik~~~p--~~~viaGNVaT~e~a~~L----i~aG- 343 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQ----------GN-SVYQIEFIKWIKQTYP--KIDVIAGNVVTREQAAQL----IAAG- 343 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSC----------CC-SHHHHHHHHHHHHHCT--TSEEEEEEECSHHHHHHH----HHHT-
T ss_pred HHHHHHHHHhcCCcEEEEeccc----------cc-cHHHHHHHHHHHhhCC--cceEEeccccCHHHHHHH----HHcC-
Confidence 3478899999999988753211 22 2456788888888632 234455554566554443 3445
Q ss_pred CCCeeecccccccCCC----CCC-CCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeCCe
Q psy8190 237 YPESVPINNLVQIKGT----PLY-GSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYGDK 311 (348)
Q Consensus 237 ~~~~i~~~~l~P~~gT----~l~-~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~~~ 311 (348)
.+.+.+-. -||+ ..- ....|..-...+...+++.+ +..|-+-+|-.+ ..--..||.+||+.+|.|..
T Consensus 344 -AD~vkVGi---GpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~--~vpvIADGGI~~--sGDi~KAlaaGAd~VMlGsl 415 (556)
T 4af0_A 344 -ADGLRIGM---GSGSICITQEVMAVGRPQGTAVYAVAEFASRF--GIPCIADGGIGN--IGHIAKALALGASAVMMGGL 415 (556)
T ss_dssp -CSEEEECS---SCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGG--TCCEEEESCCCS--HHHHHHHHHTTCSEEEESTT
T ss_pred -CCEEeecC---CCCcccccccccCCCCcHHHHHHHHHHHHHHc--CCCEEecCCcCc--chHHHHHhhcCCCEEEEchh
Confidence 55554321 1232 211 12223333344444444433 222323333222 22345689999999998764
Q ss_pred e
Q psy8190 312 L 312 (348)
Q Consensus 312 ~ 312 (348)
+
T Consensus 416 l 416 (556)
T 4af0_A 416 L 416 (556)
T ss_dssp T
T ss_pred h
Confidence 3
No 460
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=43.87 E-value=20 Score=35.37 Aligned_cols=62 Identities=13% Similarity=0.190 Sum_probs=45.9
Q ss_pred HHHHHHHH-hCCCeeeccC--CC-CH-----HHHhccCCC-CCHHHHHHHHHHHHHcC--C--eeeEeEeeec-CCC
Q psy8190 159 NQAYRLKK-VGLDYYNHNL--DT-SP-----KLYGDIIST-RDYENRLNTLKNVRNVG--I--NICCGGIIGL-SES 220 (348)
Q Consensus 159 e~l~~Lk~-aG~~~i~~g~--et-~~-----e~l~~i~~~-~~~~~~~~~i~~~~~~G--~--~i~~~~i~Gl-get 220 (348)
+.|..|++ .|++.|.+.. ++ .. .-|..+.+. .+.++..+.++.||+.| | .|..++++.+ +..
T Consensus 195 ~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~~~ 271 (637)
T 1ji1_A 195 QKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGDS 271 (637)
T ss_dssp HTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCCTT
T ss_pred HhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECcccCCCC
Confidence 56788888 9999988753 22 11 112234443 37899999999999999 9 9999999999 653
No 461
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=43.74 E-value=99 Score=28.14 Aligned_cols=63 Identities=17% Similarity=0.159 Sum_probs=33.9
Q ss_pred cCHHHHHHHHHH----HHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcE-EE--EecCCCCHHHHHH
Q psy8190 98 LSIESVITAAQK----AKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLE-TC--LTLGMLNENQAYR 163 (348)
Q Consensus 98 ~~~eei~~~~~~----~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~-i~--~~~g~l~~e~l~~ 163 (348)
++.+|+++.+.. +++.|.. +.++.- ..+..+.+++.++++.+.+.|.. ++ =+.|..++..+..
T Consensus 121 ~s~~e~l~~~~~~v~~a~~~g~~-v~~~~e--d~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~ 190 (370)
T 3rmj_A 121 MKPKQVIEAAVKAVKIAREYTDD-VEFSCE--DALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEE 190 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCSC-EEEEEE--TGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCE-EEEecC--CCCccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHH
Confidence 566666665543 3344543 333321 22345667888888877776543 22 2467676654433
No 462
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X*
Probab=43.74 E-value=51 Score=31.22 Aligned_cols=56 Identities=16% Similarity=0.168 Sum_probs=40.4
Q ss_pred CHHHHHHHHHhCCCeeeccCCCCHHHHhccC-CCCCH---HHHHHHHHHHHHcCCeeeEeE
Q psy8190 157 NENQAYRLKKVGLDYYNHNLDTSPKLYGDII-STRDY---ENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 157 ~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~-~~~~~---~~~~~~i~~~~~~G~~i~~~~ 213 (348)
-+|.++.|+++|++.+.+++ +=.+++..=. ...+. +-.-+.++.+++.|+.+.+++
T Consensus 59 ~~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL 118 (469)
T 2e9l_A 59 WEEDLKCIKQLGLTHYRFSL-SWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTL 118 (469)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEccc-cHhhcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 36899999999999999988 3145544321 12244 567788999999999876664
No 463
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=43.58 E-value=1.2e+02 Score=28.11 Aligned_cols=112 Identities=11% Similarity=0.112 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHh-CCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC--CCHHHHHHHHHhCCCeeeccCC
Q psy8190 101 ESVITAAQKAKS-DGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM--LNENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 101 eei~~~~~~~~~-~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~--l~~e~l~~Lk~aG~~~i~~g~e 177 (348)
++.+++++.+.+ .|+..|-+..........+.+.+.++++..++.+..+.++... +.....+.+...|......+..
T Consensus 131 ~~~~~~~~~l~~~~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~ 210 (461)
T 3sfw_A 131 DHVLEELESVVNNEGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAY 210 (461)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcc
Confidence 455566667777 7888875443321222456788899999998888888776432 2222334455556443333322
Q ss_pred CC---------HHHHh-------ccCCCC-CHHHHHHHHHHHHHcCCeeeEe
Q psy8190 178 TS---------PKLYG-------DIISTR-DYENRLNTLKNVRNVGINICCG 212 (348)
Q Consensus 178 t~---------~e~l~-------~i~~~~-~~~~~~~~i~~~~~~G~~i~~~ 212 (348)
+. .+.+. .++-.| +..+.++.++.+++.|+.+.+.
T Consensus 211 ~~p~~~e~~av~~~~~la~~~g~~~hi~H~s~~~~l~~i~~ak~~G~~vt~e 262 (461)
T 3sfw_A 211 TRPPEAEGEATGRAIALTALADAQLYVVHVSCADAVRRIAEAREKGWNVYGE 262 (461)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCEEEECSCCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCEEEEecCcHHHHHHHHHHHhcCCcEEEe
Confidence 21 11111 111112 5567788888999988876443
No 464
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=43.46 E-value=1.6e+02 Score=25.54 Aligned_cols=97 Identities=11% Similarity=0.031 Sum_probs=55.8
Q ss_pred cccHHHHHHHHHHHHhcCcEEE---EecC---CCCHHHHHHHHHh----CCCeeeccCCCCHHHHhccCCCCCHHHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLETC---LTLG---MLNENQAYRLKKV----GLDYYNHNLDTSPKLYGDIISTRDYENRLNT 198 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~i~---~~~g---~l~~e~l~~Lk~a----G~~~i~~g~et~~e~l~~i~~~~~~~~~~~~ 198 (348)
..+.+.+.++++.+.+.|+.-- -+.| .++.++-+.+.+. --.++.+ .-.+ ...+.++.++.
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pv--------iaGv-g~~~t~~ai~l 90 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRI--------VTGV-LVDSIEDAADQ 90 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGE--------EEEE-CCSSHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcE--------EEeC-CCccHHHHHHH
Confidence 4678888888888877665432 2333 4666544443332 2122221 1111 12366778888
Q ss_pred HHHHHHcCCeee-EeEeeecC-CCHHHHHHHHHHHHhc
Q psy8190 199 LKNVRNVGINIC-CGGIIGLS-ESRDQRAELIFQLANL 234 (348)
Q Consensus 199 i~~~~~~G~~i~-~~~i~Glg-et~e~~~~~l~~l~~l 234 (348)
.+.+.+.|..-. +.-.|-.. -+.+++.+++..+.+-
T Consensus 91 a~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 91 SAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSK 128 (294)
T ss_dssp HHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 888888887522 22222224 5888888888887664
No 465
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=43.42 E-value=1.1e+02 Score=26.75 Aligned_cols=188 Identities=10% Similarity=0.068 Sum_probs=98.8
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecC-CCCHHHHHHHHHhCCCeeecc
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLG-MLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g-~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+.+.+...++.+.+.+..-| |+...........+.+..+++.+.+ ..+++.++.. .-+.+.++...++|++++=+
T Consensus 26 ~n~e~~~avl~AAe~~~sPvI-lq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMi- 103 (286)
T 1gvf_A 26 HNAETIQAILEVCSEMRSPVI-LAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMI- 103 (286)
T ss_dssp CSHHHHHHHHHHHHHHTCCCE-EEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCCEEEE-
T ss_pred CCHHHHHHHHHHHHHhCCCEE-EECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCCCeEEE-
Confidence 445666666666666555444 3322111112346777777776665 5777777655 34688899999999988765
Q ss_pred CCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeee--EeEeeecCCCH---------HHHHHHHHHHHhcCCCCCeeecc
Q psy8190 176 LDTSPKLYGDIISTRDYENRLNTLKNVRNVGINIC--CGGIIGLSESR---------DQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 176 ~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~--~~~i~Glget~---------e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
+.|..-|+ .+.+...+.++.+|..|+.+- .+.+-|..+.. -+-.+..+++.+.+ +|.+-+.
T Consensus 104 -DgS~lp~e-----eNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~Tg--vD~LAva 175 (286)
T 1gvf_A 104 -DGSHFPFA-----ENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTG--VDSLAVA 175 (286)
T ss_dssp -CCTTSCHH-----HHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHC--CSEEEEC
T ss_pred -CCCCCCHH-----HHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHC--CCEEEee
Confidence 33211111 144566778889999998654 44443321000 11334556677777 7765443
Q ss_pred cccccCCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCccee
Q psy8190 245 NLVQIKGTPLY---GSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSI 306 (348)
Q Consensus 245 ~l~P~~gT~l~---~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~ 306 (348)
. ||.=. ..+.++.+.+.++-. ..+ ..+-+-+|. ....+.-..++..|+.-+
T Consensus 176 i-----Gt~HG~Y~~~p~Ld~~~L~~I~~----~~~-vpLVlHGgS-G~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 176 I-----GTAHGLYSKTPKIDFQRLAEIRE----VVD-VPLVLHGAS-DVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp S-----SCCSSCCSSCCCCCHHHHHHHHH----HCC-SCEEECCCT-TCCHHHHHHHHHTTEEEE
T ss_pred c-----CccccCcCCCCccCHHHHHHHHH----hcC-CCEEEECCC-CCCHHHHHHHHHCCCeEE
Confidence 2 22211 123455554444333 233 122211111 122444556788888877
No 466
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=43.38 E-value=1.4e+02 Score=28.48 Aligned_cols=69 Identities=13% Similarity=0.128 Sum_probs=47.9
Q ss_pred HHHHHhCCCCEEEEeccC-CCC--CcccHHHHHHHHHHHHh----cCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 107 AQKAKSDGATRFCMGAAW-REL--KDRDLDNIENMICEVKK----IGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~-~~~--~~~~~~~~~~l~~~i~~----~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
++.+.+.|+..|.+++.+ +.. .....+.+.++.+.+++ ..+++.++.|..+.+.+......|.+.|.+|
T Consensus 357 A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 357 VIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 455677899999886532 211 12245566666666653 2688989999999887777777999998875
No 467
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=43.25 E-value=1.7e+02 Score=25.77 Aligned_cols=76 Identities=20% Similarity=0.284 Sum_probs=47.6
Q ss_pred HHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC-----------------CCHHHHHHHH-HhCC
Q psy8190 108 QKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM-----------------LNENQAYRLK-KVGL 169 (348)
Q Consensus 108 ~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~-----------------l~~e~l~~Lk-~aG~ 169 (348)
..+.+.|+++|-|-|+ ..|...+.....++++..+..++.+....|. .+++....+. +-|+
T Consensus 89 ~~ai~~GFtSVMiDgS-~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~Tgv 167 (305)
T 1rvg_A 89 LRALRAGFTSVMIDKS-HEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGA 167 (305)
T ss_dssp HHHHHTTCSEEEECCT-TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCC
T ss_pred HHHHHcCCCeeeeCCC-CCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCC
Confidence 3455789999988776 3333345566667777777777777654332 2344444444 4688
Q ss_pred CeeeccCCCCHHHHh
Q psy8190 170 DYYNHNLDTSPKLYG 184 (348)
Q Consensus 170 ~~i~~g~et~~e~l~ 184 (348)
|.+-+++.|+--.|+
T Consensus 168 D~LAvaiGt~HG~Yk 182 (305)
T 1rvg_A 168 DYLAVAIGTSHGAYK 182 (305)
T ss_dssp SEEEECSSCCSSSBC
T ss_pred CEEEEecCccccccC
Confidence 888877777544444
No 468
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=43.25 E-value=80 Score=27.93 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=57.9
Q ss_pred cccHHHHHHHHHHHHhcCcEEEE---ecC---CCCHHHHHHH----HHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLETCL---TLG---MLNENQAYRL----KKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNT 198 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~i~~---~~g---~l~~e~l~~L----k~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~ 198 (348)
..+.+.+.++++.+.+.|+.--+ +.| .++.++-..+ .++. .++.+=+.+ ...+.++.++.
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGv---------g~~~t~~ai~l 94 (313)
T 3dz1_A 25 KIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGV---------SAPGFAAMRRL 94 (313)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEEC---------CCSSHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEec---------CCCCHHHHHHH
Confidence 46788999999988876654322 334 4666443333 3333 444431111 12367788888
Q ss_pred HHHHHHcCCee-eEeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 199 LKNVRNVGINI-CCGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 199 i~~~~~~G~~i-~~~~i~Glget~e~~~~~l~~l~~l 234 (348)
.+.+.++|..- -+.-.| ..-+.+.+.++++.+.+-
T Consensus 95 a~~A~~~Gadavlv~~P~-~~~s~~~l~~~f~~va~a 130 (313)
T 3dz1_A 95 ARLSMDAGAAGVMIAPPP-SLRTDEQITTYFRQATEA 130 (313)
T ss_dssp HHHHHHHTCSEEEECCCT-TCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCC-CCCCHHHHHHHHHHHHHh
Confidence 89999999852 222223 335788899998888765
No 469
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=43.16 E-value=1.3e+02 Score=27.01 Aligned_cols=70 Identities=10% Similarity=0.006 Sum_probs=48.3
Q ss_pred HHHHHHhCCCCEEEEeccCCCC---------CcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 106 AAQKAKSDGATRFCMGAAWREL---------KDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg~~~~---------~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.++.+.+.|++-|.++.++... ......-+.++.+.....++++.+..|..+...+.....+|.+.+.+|
T Consensus 174 ~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 174 MVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLG 252 (351)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceecc
Confidence 4456678899988775432110 011334455665555556789988999999999999999999999775
No 470
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=42.95 E-value=1.5e+02 Score=25.06 Aligned_cols=124 Identities=12% Similarity=0.095 Sum_probs=69.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEec--------CCCCHH----------
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTL--------GMLNEN---------- 159 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~--------g~l~~e---------- 159 (348)
.+.++.++. +.+.|++.|-+.... ....+...+.++-+.+++.++.+.... ...+++
T Consensus 17 ~~~~~~l~~---~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~ 91 (294)
T 3vni_A 17 ADYKYYIEK---VAKLGFDILEIAASP--LPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYT 91 (294)
T ss_dssp CCHHHHHHH---HHHHTCSEEEEESTT--GGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHH
T ss_pred cCHHHHHHH---HHHcCCCEEEecCcc--cCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHH
Confidence 356666654 456699998776542 222345677788788888888876521 112332
Q ss_pred -HHHHHHHhCCCeeeccCCC----------C-HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEee---ec-CCCHHH
Q psy8190 160 -QAYRLKKVGLDYYNHNLDT----------S-PKLYGDIISTRDYENRLNTLKNVRNVGINICCGGII---GL-SESRDQ 223 (348)
Q Consensus 160 -~l~~Lk~aG~~~i~~g~et----------~-~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~---Gl-get~e~ 223 (348)
.++..++.|+..+.+.+-+ . ++.++. ..+...+..+.+.+.|+.+...-+- +. ..|.++
T Consensus 92 ~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ 166 (294)
T 3vni_A 92 DLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWER-----SVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQE 166 (294)
T ss_dssp HHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHH-----HHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHH
T ss_pred HHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHH-----HHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHH
Confidence 3555566699988532211 1 111111 1233334455666789988766553 22 567777
Q ss_pred HHHHHHHH
Q psy8190 224 RAELIFQL 231 (348)
Q Consensus 224 ~~~~l~~l 231 (348)
..+.++.+
T Consensus 167 ~~~l~~~v 174 (294)
T 3vni_A 167 GVDFVKQV 174 (294)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66655443
No 471
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=42.53 E-value=1.7e+02 Score=25.56 Aligned_cols=95 Identities=12% Similarity=0.022 Sum_probs=55.8
Q ss_pred cccHHHHHHHHHHHHhcCcEEEE---ecC---CCCHHHHHHHHHh----CCCeeec--cCCCCHHHHhccCCCCCHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLETCL---TLG---MLNENQAYRLKKV----GLDYYNH--NLDTSPKLYGDIISTRDYENRL 196 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~i~~---~~g---~l~~e~l~~Lk~a----G~~~i~~--g~et~~e~l~~i~~~~~~~~~~ 196 (348)
..+.+.+.++++.+.+.|+.--+ +.| .++.++-+.+.+. --.++.+ |+. ..+.++.+
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-----------~~~t~~ai 100 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-----------TYDTAHSI 100 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-----------CSCHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-----------CCCHHHHH
Confidence 46788888888888776654322 333 4555543333332 1123322 221 23677888
Q ss_pred HHHHHHHHcCCeee-EeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 197 NTLKNVRNVGINIC-CGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 197 ~~i~~~~~~G~~i~-~~~i~Glget~e~~~~~l~~l~~l 234 (348)
+..+.+.+.|..-. +.-.|-..-+.+++.++++.+.+-
T Consensus 101 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 139 (304)
T 3l21_A 101 RLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADA 139 (304)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 88888888887532 222222245788888888887765
No 472
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=42.46 E-value=1.5e+02 Score=24.75 Aligned_cols=177 Identities=14% Similarity=0.102 Sum_probs=103.7
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC----CCH----HHHHHHHHhCC
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM----LNE----NQAYRLKKVGL 169 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~----l~~----e~l~~Lk~aG~ 169 (348)
.+.+++.+.++++.+.|+..|++.-+ ...... +.++..++.++...|. .+. ...+.-.+.|.
T Consensus 16 ~t~~~i~~l~~~a~~~~~~aVcv~p~-------~v~~~~---~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GA 85 (220)
T 1ub3_A 16 ATLEEVAKAAEEALEYGFYGLCIPPS-------YVAWVR---ARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGA 85 (220)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCGG-------GHHHHH---HHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECHH-------HHHHHH---HHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCC
Confidence 57899999999999999999987432 122222 3334446777655442 333 24455556799
Q ss_pred CeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeeccc-cc
Q psy8190 170 DYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPINN-LV 247 (348)
Q Consensus 170 ~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~~-l~ 247 (348)
+-|.+-+.- -.+ +...++..++-+..++++--....-+|+-. --|.+++....+...+++ .|.|..+. |.
T Consensus 86 devd~vini--g~~----~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaG--ADfVKTsTGf~ 157 (220)
T 1ub3_A 86 DEVDMVLHL--GRA----KAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGG--ADFLKTSTGFG 157 (220)
T ss_dssp SEEEEECCH--HHH----HTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHT--CSEEECCCSSS
T ss_pred CEEEecccc--hhh----hCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC--CCEEEeCCCCC
Confidence 988764421 111 124666666666666663211233334444 347888888899999998 88887664 43
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCccee
Q psy8190 248 QIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSI 306 (348)
Q Consensus 248 P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~ 306 (348)
| ...+++....|... .-+...|.+++|-.+. +.....+.+||+.+
T Consensus 158 ~---------~gat~~dv~~m~~~---vg~~v~VkaaGGirt~--~~al~~i~aGa~Ri 202 (220)
T 1ub3_A 158 P---------RGASLEDVALLVRV---AQGRAQVKAAGGIRDR--ETALRMLKAGASRL 202 (220)
T ss_dssp S---------CCCCHHHHHHHHHH---HTTSSEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred C---------CCCCHHHHHHHHHh---hCCCCeEEEECCCCCH--HHHHHHHHCCCccc
Confidence 2 12344444333332 2334567777764432 33344567999966
No 473
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=42.31 E-value=1.5e+02 Score=26.45 Aligned_cols=135 Identities=12% Similarity=0.119 Sum_probs=68.8
Q ss_pred cCHHHHHHHHHHHHhCC-----CCE--EEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC--CCHHHHHHHHHhC
Q psy8190 98 LSIESVITAAQKAKSDG-----ATR--FCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM--LNENQAYRLKKVG 168 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G-----~~~--i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~--l~~e~l~~Lk~aG 168 (348)
.+.+++.+....-...| ++- |-++.+...+.....+.+..-++.-++.++++.++.+. -..+.++.|++.|
T Consensus 126 ~~~e~l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~~l~iL~e~~ 205 (330)
T 3pnz_A 126 TTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQEN 205 (330)
T ss_dssp SCHHHHHHHHHHHHHTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHHHHHHHHHcC
Confidence 46777765543323333 343 33333212233334455666666666778888877653 3456799999998
Q ss_pred CCeeeccCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec-CCCHHHHHHHHHHHHhcCCCCCeeecc
Q psy8190 169 LDYYNHNLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL-SESRDQRAELIFQLANLNPYPESVPIN 244 (348)
Q Consensus 169 ~~~i~~g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl-get~e~~~~~l~~l~~l~~~~~~i~~~ 244 (348)
++.-.+.+ -...+..++ +..+.+.+.|+.++.+.+.-. ..+.+...+.+..+.+.+. .+.+-+.
T Consensus 206 ~~~~~vvi-------~H~~~s~~~----e~a~~~l~~G~~i~~~g~~t~~~~~~~~~~~~l~~lv~~g~-~drille 270 (330)
T 3pnz_A 206 IPLEYLSI-------GHMDRNLDP----YYHKQVAKTGAFMSFDGIAKIKYAPESARIAAILYLVSEGF-EDQILVS 270 (330)
T ss_dssp CCGGGEEE-------TTGGGSCCH----HHHHHHHTTTCEEEECCTTCTTTCCHHHHHHHHHHHHHTTC-GGGEEEC
T ss_pred CCCCeEEE-------ecCCCCCCH----HHHHHHHHcCcEEEEccCcccCCCChHHHHHHHHHHHHcCC-CCeEEEe
Confidence 76211101 001112233 344445567988876643211 1234556666666555442 4555443
No 474
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=42.21 E-value=1.1e+02 Score=27.93 Aligned_cols=100 Identities=12% Similarity=-0.020 Sum_probs=57.6
Q ss_pred ccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHh----CCCeeec---cCCCC---HHHHh---------ccCCCC
Q psy8190 130 RDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKV----GLDYYNH---NLDTS---PKLYG---------DIISTR 190 (348)
Q Consensus 130 ~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~a----G~~~i~~---g~et~---~e~l~---------~i~~~~ 190 (348)
.+.+...++++.+.+.++.+.=.|-.-+.+.++.+++. |.. +.+ .+-+. .++++ ++++-
T Consensus 212 ~~~~~ai~~~~~l~~~~i~~iE~P~~~d~~~~~~l~~~l~~~g~~-iPIa~dE~~~~~~~~~~i~~~~~d~v~ik~~~~- 289 (392)
T 3p3b_A 212 YNLNLTKEVLAALSDVNLYWLEEAFHEDEALYEDLKEWLGQRGQN-VLIADGEGLASPHLIEWATRGRVDVLQYDIIWP- 289 (392)
T ss_dssp CCHHHHHHHHHHTTTSCEEEEECSSSCCHHHHHHHHHHHHHHTCC-CEEEECCSSCCTTHHHHHHTTSCCEECCBTTTB-
T ss_pred CCHHHHHHHHHHHHhcCCCEEecCCcccHHHHHHHHHhhccCCCC-ccEEecCCCCHHHHHHHHHcCCCCEEEeCcccc-
Confidence 45677778888877666543212211355677777775 332 222 21121 22322 11223
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEeeecCCCHHHHHHHHHHHHhcC
Q psy8190 191 DYENRLNTLKNVRNVGINICCGGIIGLSESRDQRAELIFQLANLN 235 (348)
Q Consensus 191 ~~~~~~~~i~~~~~~G~~i~~~~i~Glget~e~~~~~l~~l~~l~ 235 (348)
...+.++..+.+++.|+.+..+ + +|+.-.+..++.....+.
T Consensus 290 Git~~~~i~~~A~~~gi~~~~h-~---~es~i~~~a~l~laa~~~ 330 (392)
T 3p3b_A 290 GFTHWMELGEKLDAHGLRSAPH-C---YGNAYGIYASGHLSAAVR 330 (392)
T ss_dssp CHHHHHHHHHHHHHTTCEECCB-C---CSCTHHHHHHHHHGGGCT
T ss_pred CHHHHHHHHHHHHHcCCEEEec-C---CCCHHHHHHHHHHHHhCC
Confidence 7888999999999999987666 3 456555556666655553
No 475
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=42.15 E-value=1.7e+02 Score=25.27 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=48.1
Q ss_pred cccccCHHHHHHHHHHHHhCCCCEE-EEe--------------------cc--CCCCCcccHHHHHHHHHHHHh-cCcEE
Q psy8190 94 ATKILSIESVITAAQKAKSDGATRF-CMG--------------------AA--WRELKDRDLDNIENMICEVKK-IGLET 149 (348)
Q Consensus 94 ~~~~~~~eei~~~~~~~~~~G~~~i-~l~--------------------gg--~~~~~~~~~~~~~~l~~~i~~-~~~~i 149 (348)
++..-++.+.++.++.+.+.|+..+ +.. |. |+.....++ ++++.+++ .++++
T Consensus 115 ~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~----~lI~~I~e~~~vPV 190 (265)
T 1wv2_A 115 KTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNP----YNLRIILEEAKVPV 190 (265)
T ss_dssp TTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCH----HHHHHHHHHCSSCB
T ss_pred cccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCH----HHHHHHHhcCCCCE
Confidence 3444567777888888777787766 222 10 011111233 33344443 36777
Q ss_pred EEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 150 CLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 150 ~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+..|.-+++.+....+.|++.|.+|
T Consensus 191 I~eGGI~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 191 LVDAGVGTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp EEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred EEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 77788888888888888888888765
No 476
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=42.13 E-value=1.8e+02 Score=25.73 Aligned_cols=136 Identities=10% Similarity=0.024 Sum_probs=72.5
Q ss_pred HHHhCCCCEEEEeccCCCCC--cccHHHHHHHHHHHHhcCcEEEEe---------cCC------C--C------------
Q psy8190 109 KAKSDGATRFCMGAAWRELK--DRDLDNIENMICEVKKIGLETCLT---------LGM------L--N------------ 157 (348)
Q Consensus 109 ~~~~~G~~~i~l~gg~~~~~--~~~~~~~~~l~~~i~~~~~~i~~~---------~g~------l--~------------ 157 (348)
.+++.|+..|.+.-- ..|. ..+.+++.++++..++.|+.+.+. |+. - +
T Consensus 35 ilk~~G~N~VRi~~w-~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~~~yt 113 (332)
T 1hjs_A 35 ILAANGVNTVRQRVW-VNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYT 113 (332)
T ss_dssp HHHHTTCCEEEEEEC-SSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEeee-eCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchHHHHHHHHHHH
Confidence 345689998877411 1121 236789999999999998887764 321 0 1
Q ss_pred HHHHHHHHHhC--CCeeeccCCCCHHHHhccCCCCCHHHH----HHHHHHHHHcCCeeeEeEeeec--CCCHHHHHHHHH
Q psy8190 158 ENQAYRLKKVG--LDYYNHNLDTSPKLYGDIISTRDYENR----LNTLKNVRNVGINICCGGIIGL--SESRDQRAELIF 229 (348)
Q Consensus 158 ~e~l~~Lk~aG--~~~i~~g~et~~e~l~~i~~~~~~~~~----~~~i~~~~~~G~~i~~~~i~Gl--get~e~~~~~l~ 229 (348)
.+.++.|++.| ++.+.+|-|....++--.+.....+.. ...++.+|+.......-+++.+ +.+.+...--++
T Consensus 114 ~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~~~~~d 193 (332)
T 1hjs_A 114 LDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYT 193 (332)
T ss_dssp HHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCCccchHHHHHHHH
Confidence 26678888877 455666766532221000111133333 2334455554311123344444 445444444445
Q ss_pred HHHhcC-C---CCCeeeccc
Q psy8190 230 QLANLN-P---YPESVPINN 245 (348)
Q Consensus 230 ~l~~l~-~---~~~~i~~~~ 245 (348)
.+.+.+ . ..|.|+++.
T Consensus 194 ~~~~~g~~~~~~~DvIG~sy 213 (332)
T 1hjs_A 194 NVLKQGTLELSDFDMMGVSF 213 (332)
T ss_dssp HHHTTSSSCGGGCCEEEEEC
T ss_pred HHHhcCCCCCCCcCEEEEec
Confidence 555554 1 378888773
No 477
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=42.07 E-value=87 Score=26.54 Aligned_cols=44 Identities=14% Similarity=0.090 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEeeec--CCCH-HHHHHHHHHHHhcC
Q psy8190 191 DYENRLNTLKNVRNVGINICCGGIIGL--SESR-DQRAELIFQLANLN 235 (348)
Q Consensus 191 ~~~~~~~~i~~~~~~G~~i~~~~i~Gl--get~-e~~~~~l~~l~~l~ 235 (348)
..+...+.++.+++.|.+... +..|. +.+. +.+....+.++++.
T Consensus 87 ~~~~~~~~i~~A~~lG~~~v~-~~~g~~~~~~~~~~~~~~~~~l~~l~ 133 (287)
T 2x7v_A 87 SVELLKKEVEICRKLGIRYLN-IHPGSHLGTGEEEGIDRIVRGLNEVL 133 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEEE-ECCEECTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEE-EecCCCCCCCHHHHHHHHHHHHHHHH
Confidence 345667788888888876432 22344 3344 34444455555553
No 478
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=42.00 E-value=2e+02 Score=26.08 Aligned_cols=83 Identities=14% Similarity=-0.002 Sum_probs=49.2
Q ss_pred ccHHHHHHHHHHHHhcCcEEEEec-CCCCHHHHHHHHHhCCCeeec-cCCC--CHHHHh-cc----------CCC--CCH
Q psy8190 130 RDLDNIENMICEVKKIGLETCLTL-GMLNENQAYRLKKVGLDYYNH-NLDT--SPKLYG-DI----------IST--RDY 192 (348)
Q Consensus 130 ~~~~~~~~l~~~i~~~~~~i~~~~-g~l~~e~l~~Lk~aG~~~i~~-g~et--~~e~l~-~i----------~~~--~~~ 192 (348)
.+.+...++++.+.+.++.+.=.+ ..-+.+.++.+++.- .+.+ .-|+ +.+.++ .+ ... ...
T Consensus 205 ~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 282 (391)
T 2qgy_A 205 EDLDQTKSFLKEVSSFNPYWIEEPVDGENISLLTEIKNTF--NMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGL 282 (391)
T ss_dssp SCHHHHHHHHHHHGGGCCSEEECSSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCH
T ss_pred CCHHHHHHHHHHHHhcCCCeEeCCCChhhHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCH
Confidence 356778888888887766442122 223456777777652 2333 2233 222222 11 112 378
Q ss_pred HHHHHHHHHHHHcCCeeeEeEe
Q psy8190 193 ENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 193 ~~~~~~i~~~~~~G~~i~~~~i 214 (348)
.+.++..+.++++|+.+..+.+
T Consensus 283 t~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 283 IDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHHHHHHHTTCEECCBCC
T ss_pred HHHHHHHHHHHHCCCEEeccCC
Confidence 8999999999999998766643
No 479
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=41.93 E-value=1e+02 Score=29.02 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=64.2
Q ss_pred HHHHHHHHHHH-hCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCC--CHHHHHHHHHhCCCeeeccCC
Q psy8190 101 ESVITAAQKAK-SDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGML--NENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 101 eei~~~~~~~~-~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l--~~e~l~~Lk~aG~~~i~~g~e 177 (348)
++.++++..+. +.|+..|-+..+.......+.+.+.++++..++.+..+.++...- .....+.+.+.|......+..
T Consensus 128 ~~~l~el~~l~~~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~ 207 (490)
T 3dc8_A 128 EQVFNEMETIVKDKGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAY 207 (490)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCcccccc
Confidence 34455566666 788887644322122223467788999999988888887774421 112224455556544433333
Q ss_pred CCHH---------HHh---cc-CC---CC-CHHHHHHHHHHHHHcCCeeeEeE
Q psy8190 178 TSPK---------LYG---DI-IS---TR-DYENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 178 t~~e---------~l~---~i-~~---~~-~~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+.+. ... .. ++ .| +..+.++.++.+++.|+.+.+..
T Consensus 208 ~rP~~~E~~av~r~i~la~~~g~~lhi~HvSt~~~~~li~~ak~~G~~Vt~e~ 260 (490)
T 3dc8_A 208 SRPAEVEGEAANRAIMIADMAGCPVYIVHTSCEQAHEAIRRARAKGMRVFGEP 260 (490)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHTCCEEESSCCSHHHHHHHHHHHHTTCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCeEEEEE
Confidence 2111 110 11 11 22 66788899999999998876544
No 480
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=41.83 E-value=1.5e+02 Score=24.67 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCCCHHHHHHH-HHHHHHcCCeee
Q psy8190 132 LDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTRDYENRLNT-LKNVRNVGINIC 210 (348)
Q Consensus 132 ~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~~~~~~~~~-i~~~~~~G~~i~ 210 (348)
.+.+.+.++.+++.|+.+.+.-=......+..|....++.|-+. ......+.........++. +..++..|+.+.
T Consensus 142 ~~~~~~~l~~L~~~G~~ialDdfG~g~s~l~~L~~l~~d~iKiD----~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~vi 217 (250)
T 4f3h_A 142 LRNAQQFLASVSAMGCKVGLEQFGSGLDSFQLLAHFQPAFLKLD----RSITGDIASARESQEKIREITSRAQPTGILTV 217 (250)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEETSSTHHHHHHTTSCCSEEEEC----HHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEeCCCCCchHHHHHhhCCCCEEEEC----HHHHHhHhcChhhHHHHHHHHHHHHHcCCEEE
Confidence 34556666666666666665321123345566666666666543 2333344333333444444 567788898875
Q ss_pred EeEeeecCCCHHHHHHHHHHHHhcCCCCCeee
Q psy8190 211 CGGIIGLSESRDQRAELIFQLANLNPYPESVP 242 (348)
Q Consensus 211 ~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~ 242 (348)
+.. -||.++ +..+++++ .+.+.
T Consensus 218 aeG----VEt~~~----~~~l~~~G--~~~~Q 239 (250)
T 4f3h_A 218 AEF----VADAQS----MSSFFTAG--VDYVQ 239 (250)
T ss_dssp ECC----CCCHHH----HHHHHHHT--CSEEC
T ss_pred Eec----cCCHHH----HHHHHHcC--CCEEe
Confidence 542 366655 45677787 66543
No 481
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=41.80 E-value=1.7e+02 Score=25.34 Aligned_cols=95 Identities=12% Similarity=0.031 Sum_probs=53.4
Q ss_pred cccHHHHHHHHHHHHhcCcEEE---EecC---CCCHHHHHHHHHh----CCCeeec--cCCCCHHHHhccCCCCCHHHHH
Q psy8190 129 DRDLDNIENMICEVKKIGLETC---LTLG---MLNENQAYRLKKV----GLDYYNH--NLDTSPKLYGDIISTRDYENRL 196 (348)
Q Consensus 129 ~~~~~~~~~l~~~i~~~~~~i~---~~~g---~l~~e~l~~Lk~a----G~~~i~~--g~et~~e~l~~i~~~~~~~~~~ 196 (348)
..+.+.+.++++.+.+.|+.-- -+.| .++.++-..+.+. --.++.+ |+. ..+.++.+
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-----------~~~t~~ai 86 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-----------ANATAEAI 86 (292)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-----------CSSHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-----------CccHHHHH
Confidence 3677888888888776655432 2333 4565443333322 1112221 221 23567777
Q ss_pred HHHHHHHHcCCeee-EeEeeecCCCHHHHHHHHHHHHhc
Q psy8190 197 NTLKNVRNVGINIC-CGGIIGLSESRDQRAELIFQLANL 234 (348)
Q Consensus 197 ~~i~~~~~~G~~i~-~~~i~Glget~e~~~~~l~~l~~l 234 (348)
+..+.+.+.|..-. +.-.|-..-+.+++.++++.+.+-
T Consensus 87 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a 125 (292)
T 2ojp_A 87 SLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEH 125 (292)
T ss_dssp HHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 77788888887522 221222245788888888887764
No 482
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=41.71 E-value=1.7e+02 Score=25.29 Aligned_cols=78 Identities=10% Similarity=0.228 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCCeeecccccccCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCceeccccccccchhhHHH
Q psy8190 219 ESRDQRAELIFQLANLNPYPESVPINNLVQIKGTPLYGSSILDPL-EFIRTIAVARITMPTSRIRMSAGRKEMGETTQAF 297 (348)
Q Consensus 219 et~e~~~~~l~~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~-~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~ 297 (348)
.+.+..++..+.+.+-+ .+.|-+.--.-.||.. +.+++ |..+++-+.+.+- +..+.+|- .+...+....
T Consensus 27 ~~~~~a~~~a~~m~~~G--AdiIDIGgeSTRPga~-----~vs~eeE~~Rv~pvi~~l~-~~~v~iSI--DT~~~~Va~~ 96 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEG--ADIIDVGGVSTRPGHE-----MVTLEEELNRVLPVVEAIV-GFDVKISV--DTFRSEVAEA 96 (270)
T ss_dssp CHHHHHHHHHHHHHHTT--CSEEEEESCCCSTTCC-----CCCHHHHHHHHHHHHHHHT-TSSSEEEE--ECSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCC--CCEEEECCccCCCCCC-----CCchHHHHHHHHHHHHHhh-cCCCeEEE--ECCCHHHHHH
Confidence 34566667777666666 7777766554445543 34544 4555555555543 22333331 2344677788
Q ss_pred HHHhCccee
Q psy8190 298 CFLAGANSI 306 (348)
Q Consensus 298 ~l~~GAn~~ 306 (348)
++.+||+-+
T Consensus 97 al~aGa~iI 105 (270)
T 4hb7_A 97 CLKLGVDMI 105 (270)
T ss_dssp HHHHTCCEE
T ss_pred HHHhcccee
Confidence 999999765
No 483
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=41.69 E-value=18 Score=35.88 Aligned_cols=60 Identities=15% Similarity=0.201 Sum_probs=43.5
Q ss_pred HHHHHHHhCCCeeeccC--CC-CHH-----------HHh-----ccCCCC------CHHHHHHHHHHHHHcCCeeeEeEe
Q psy8190 160 QAYRLKKVGLDYYNHNL--DT-SPK-----------LYG-----DIISTR------DYENRLNTLKNVRNVGINICCGGI 214 (348)
Q Consensus 160 ~l~~Lk~aG~~~i~~g~--et-~~e-----------~l~-----~i~~~~------~~~~~~~~i~~~~~~G~~i~~~~i 214 (348)
.+..|++.|++.|.+.. ++ ... -|. .+.+.. +.++..+.++.+|+.||.|..+++
T Consensus 184 ~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD~V 263 (657)
T 2wsk_A 184 MINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIV 263 (657)
T ss_dssp HHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 48899999999998752 22 221 121 233322 368999999999999999999999
Q ss_pred eec-CC
Q psy8190 215 IGL-SE 219 (348)
Q Consensus 215 ~Gl-ge 219 (348)
+.+ ++
T Consensus 264 ~NH~~~ 269 (657)
T 2wsk_A 264 LNHSAE 269 (657)
T ss_dssp CSCCTT
T ss_pred eccccc
Confidence 988 54
No 484
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ...
Probab=41.60 E-value=60 Score=30.71 Aligned_cols=54 Identities=11% Similarity=0.201 Sum_probs=39.2
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccCCC-CC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDIIST-RD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~-~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+|.++.|+++|++.+.+++ +=.+++..- ++ .+ .+..-+.++.+++.|+.+.+++
T Consensus 84 ~eDi~lm~~~G~~~~R~si-~W~Ri~P~G-~g~~n~~gl~~yd~lid~l~~~GI~pivtL 141 (468)
T 2j78_A 84 KEDIEIIEKLGVKAYRFSI-SWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVTI 141 (468)
T ss_dssp HHHHHHHHHTTCCEEEEEC-CHHHHSTTS-SSCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEecc-CHHHhCCCC-CCCcCHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 6899999999999999887 213444331 22 23 3667788999999999877665
No 485
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=41.37 E-value=27 Score=35.20 Aligned_cols=61 Identities=15% Similarity=0.087 Sum_probs=43.1
Q ss_pred HHHHHHHHhCCCeeecc--CCC-CHH--------------HHh-----ccCCC-CC-------HHHHHHHHHHHHHcCCe
Q psy8190 159 NQAYRLKKVGLDYYNHN--LDT-SPK--------------LYG-----DIIST-RD-------YENRLNTLKNVRNVGIN 208 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g--~et-~~e--------------~l~-----~i~~~-~~-------~~~~~~~i~~~~~~G~~ 208 (348)
+.+..|++.|++.|.+. .+. ... -|. .+.+. .+ .++..+.++.+|+.||.
T Consensus 209 ~~l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~ 288 (750)
T 1bf2_A 209 LKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIK 288 (750)
T ss_dssp HTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcccccccCccccCCCCCccHHHHHHHHHHHHHHCCCE
Confidence 45788888899988875 222 111 021 12221 14 79999999999999999
Q ss_pred eeEeEeeec-CC
Q psy8190 209 ICCGGIIGL-SE 219 (348)
Q Consensus 209 i~~~~i~Gl-ge 219 (348)
|..++++.+ ++
T Consensus 289 VilDvV~NH~~~ 300 (750)
T 1bf2_A 289 VYMDVVYNHTAE 300 (750)
T ss_dssp EEEEECCSSCTT
T ss_pred EEEEEecccccC
Confidence 999999998 54
No 486
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=41.33 E-value=42 Score=32.18 Aligned_cols=78 Identities=10% Similarity=0.085 Sum_probs=42.3
Q ss_pred cCHHHHHHHHHHHHh------CCCCEEEEeccCCCCCcccHHHHHHHHHH--HHhcCcEEEEecCCC-------CHHHHH
Q psy8190 98 LSIESVITAAQKAKS------DGATRFCMGAAWRELKDRDLDNIENMICE--VKKIGLETCLTLGML-------NENQAY 162 (348)
Q Consensus 98 ~~~eei~~~~~~~~~------~G~~~i~l~gg~~~~~~~~~~~~~~l~~~--i~~~~~~i~~~~g~l-------~~e~l~ 162 (348)
.+++++.+.++.+.+ .++-.|=|.|.... ..+...+.+.++. .++.++.++++.|.. .....+
T Consensus 270 ~~~e~a~e~l~~a~~~~~~~~~~VvG~DLaG~E~~--g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~ 347 (508)
T 3lgd_A 270 KDVAVIAESIRMAMGLRIKFPTVVAGFDLVGHEDT--GHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILD 347 (508)
T ss_dssp SCHHHHHHHHHHHHHHHHHCTTTEEEEEEESCTTT--SCCTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhCCCceEEeccCCCCCC--CCCHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHH
Confidence 455655554444332 24555666655211 1123455666665 444577776665533 234444
Q ss_pred HHHHhCCCeeeccCCC
Q psy8190 163 RLKKVGLDYYNHNLDT 178 (348)
Q Consensus 163 ~Lk~aG~~~i~~g~et 178 (348)
.+ ..|.+||.+|+..
T Consensus 348 Al-~Lga~RIgHGv~l 362 (508)
T 3lgd_A 348 AL-MLNTTRIGHGFAL 362 (508)
T ss_dssp HH-HTTCSSEEECTTG
T ss_pred HH-hcCCceeeeeEec
Confidence 55 5788888888765
No 487
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=41.31 E-value=90 Score=27.27 Aligned_cols=111 Identities=14% Similarity=0.015 Sum_probs=59.5
Q ss_pred ccCHHHHHHHHHHHHhCCCCE-EEEeccCCCCCcccHHHHH-HHHHHHHhcCc-EEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 97 ILSIESVITAAQKAKSDGATR-FCMGAAWRELKDRDLDNIE-NMICEVKKIGL-ETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 97 ~~~~eei~~~~~~~~~~G~~~-i~l~gg~~~~~~~~~~~~~-~l~~~i~~~~~-~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
..+.+|++..++...+ |.+. +.+.+-+...+..+.+... ...+.+++.|. -+.+.-|.--.+.++.+.++|+..+-
T Consensus 76 ~vTldemi~h~~aV~r-~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~agIpV~g 154 (281)
T 1oy0_A 76 PISIDELIPLVRGVVR-GAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMA 154 (281)
T ss_dssp SCCGGGTHHHHHHHHH-HCTTSEEEEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHHHh-cCCCCeEEEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHHCCCCEEe
Confidence 3678888888776554 3443 2222221111112445543 35566665554 34556665556889999999976543
Q ss_pred -cc--CCC-C-HHHHhccCCCCCHHHHHHHHHHHHHcCCe
Q psy8190 174 -HN--LDT-S-PKLYGDIISTRDYENRLNTLKNVRNVGIN 208 (348)
Q Consensus 174 -~g--~et-~-~e~l~~i~~~~~~~~~~~~i~~~~~~G~~ 208 (348)
+| .|+ . ..-|+...+....++.++-.+.+.++|-.
T Consensus 155 HiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~ 194 (281)
T 1oy0_A 155 HIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAF 194 (281)
T ss_dssp EEECCC--------------CHHHHHHHHHHHHHHHHTCS
T ss_pred eecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCc
Confidence 23 344 2 22355554433457888889999999964
No 488
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=41.23 E-value=96 Score=28.72 Aligned_cols=80 Identities=20% Similarity=0.299 Sum_probs=55.3
Q ss_pred cCHHHHHHHHHHH-----HhCCCCEEEEeccCCCCC-----------cccHHHHHHHHHHHHhcCcEEEE--ec------
Q psy8190 98 LSIESVITAAQKA-----KSDGATRFCMGAAWRELK-----------DRDLDNIENMICEVKKIGLETCL--TL------ 153 (348)
Q Consensus 98 ~~~eei~~~~~~~-----~~~G~~~i~l~gg~~~~~-----------~~~~~~~~~l~~~i~~~~~~i~~--~~------ 153 (348)
.+.+.+++.++.+ .+.|+..|.|-.|+.... ..-+.-+..+++.+++.|+.+.+ .+
T Consensus 26 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~~g~~~c~ 105 (417)
T 1szn_A 26 IDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCA 105 (417)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHHHHHHcCCEEEEEeCCCCchhc
Confidence 5678888888887 677899998876653210 11123588999999998877543 33
Q ss_pred ---CCC--CHHHHHHHHHhCCCeeeccCC
Q psy8190 154 ---GML--NENQAYRLKKVGLDYYNHNLD 177 (348)
Q Consensus 154 ---g~l--~~e~l~~Lk~aG~~~i~~g~e 177 (348)
|.. .....+.+++.|++.|-+..-
T Consensus 106 ~~Pgs~~~~~~d~~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 106 GYPASLGYEDVDAADFADWGVDYLKYDNC 134 (417)
T ss_dssp SCBCCTTCHHHHHHHHHHTTCCEEEEECC
T ss_pred cCcchHhHHHHHHHHHHHcCCCEEEECCC
Confidence 222 234578899999999987654
No 489
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=41.20 E-value=46 Score=28.40 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=41.6
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcccH-HHHHHHHHHHHhc---CcEEEEecCCCCHHHHHHHHHhCCCeee
Q psy8190 98 LSIESVITAAQKAKSDGATRFCMGAAWRELKDRDL-DNIENMICEVKKI---GLETCLTLGMLNENQAYRLKKVGLDYYN 173 (348)
Q Consensus 98 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~-~~~~~l~~~i~~~---~~~i~~~~g~l~~e~l~~Lk~aG~~~i~ 173 (348)
-+++|+. .+.+.|++.|.++.-..+.+.... ..=.+.++.+.+. ++++.+-.| ++.+.+..+.++|++.+.
T Consensus 143 ht~~Ea~----~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGG-I~~~ni~~~~~aGa~gva 217 (243)
T 3o63_A 143 HDPDQVA----AAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGG-INAQRLPAVLDAGARRIV 217 (243)
T ss_dssp CSHHHHH----HHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESS-CCTTTHHHHHHTTCCCEE
T ss_pred CCHHHHH----HHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecC-CCHHHHHHHHHcCCCEEE
Confidence 4555543 345679999888553212111110 0012344444442 455554444 599999999999999987
Q ss_pred cc
Q psy8190 174 HN 175 (348)
Q Consensus 174 ~g 175 (348)
++
T Consensus 218 v~ 219 (243)
T 3o63_A 218 VV 219 (243)
T ss_dssp ES
T ss_pred Ee
Confidence 64
No 490
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=41.18 E-value=46 Score=28.11 Aligned_cols=79 Identities=14% Similarity=0.106 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCeeeccCCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCee-eEeEeeec----CCCHHHHHHHHHHH
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINI-CCGGIIGL----SESRDQRAELIFQL 231 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i-~~~~i~Gl----get~e~~~~~l~~l 231 (348)
.+.++.++++|++.|.+..+. . ....+.....+.-+.+++.|+.+ +.+..+.+ .+..+.+.+.++.+
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~-------~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 94 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPS-------GSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDA 94 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTT-------SSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeccccc-------cccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHH
Q ss_pred HhcCCCCCeeeccc
Q psy8190 232 ANLNPYPESVPINN 245 (348)
Q Consensus 232 ~~l~~~~~~i~~~~ 245 (348)
.+++ ...+.+.+
T Consensus 95 ~~lG--~~~v~~~~ 106 (272)
T 2q02_A 95 QGVG--ARALVLCP 106 (272)
T ss_dssp HHHT--CSEEEECC
T ss_pred HHhC--CCEEEEcc
No 491
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=41.15 E-value=1.4e+02 Score=26.89 Aligned_cols=69 Identities=14% Similarity=0.206 Sum_probs=46.8
Q ss_pred HHHHHHhCCCCEEEEecc-CCCC--CcccHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHhCCCeeecc
Q psy8190 106 AAQKAKSDGATRFCMGAA-WREL--KDRDLDNIENMICEVKKIGLETCLTLGMLNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 106 ~~~~~~~~G~~~i~l~gg-~~~~--~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g 175 (348)
.++.+.+.|++.|.+++. ++.. .....+.+.++.+.+.. .+++.++.|..+.+.+.....+|.+.+.+|
T Consensus 230 ~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~-~ipVia~GGI~~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 230 DAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKG-KIEVYMDGGVRTGTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTT-SSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 355667889999988553 2211 12244555565555432 588999999998877777777999999875
No 492
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=41.13 E-value=1.9e+02 Score=25.46 Aligned_cols=138 Identities=9% Similarity=0.056 Sum_probs=81.1
Q ss_pred HHHHHHHHhCCCeeecc--CCC-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEe-ee--cC--CCH-HHHHHHHH
Q psy8190 159 NQAYRLKKVGLDYYNHN--LDT-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGI-IG--LS--ESR-DQRAELIF 229 (348)
Q Consensus 159 e~l~~Lk~aG~~~i~~g--~et-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i-~G--lg--et~-e~~~~~l~ 229 (348)
..++...++|++.+.+- +.. .++ ....+...+..+.+++.|+++-..++ .| ++ ..+ +.+.+.++
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~-------~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~ 184 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDA-------QQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAK 184 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCH-------HHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccH-------HHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHH
Confidence 56788889999998832 222 111 11345677778888899998776643 23 23 233 55666688
Q ss_pred HHHhcCCCCCeeecccccccCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccc--hhhHHHHHHhCcceee
Q psy8190 230 QLANLNPYPESVPINNLVQIKGTPLYGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMG--ETTQAFCFLAGANSIF 307 (348)
Q Consensus 230 ~l~~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~--~~~~~~~l~~GAn~~~ 307 (348)
.+.+++ .|.+.+.+-+- +|. +.+...+++.....+.+-..|-+++|- +.. .+.-..++.+||+.+.
T Consensus 185 ~a~~lG--aD~iKv~~~~~--~~g-------~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~ 252 (304)
T 1to3_A 185 ELGDSG--ADLYKVEMPLY--GKG-------ARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFL 252 (304)
T ss_dssp HHTTSS--CSEEEECCGGG--GCS-------CHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEE
T ss_pred HHHHcC--CCEEEeCCCcC--CCC-------CHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEE
Confidence 888888 88877665221 222 556666655542222222225455543 111 1334557889999998
Q ss_pred eCCeeccC
Q psy8190 308 YGDKLLTT 315 (348)
Q Consensus 308 ~~~~~~~~ 315 (348)
.|-.+...
T Consensus 253 vGRaI~q~ 260 (304)
T 1to3_A 253 AGRAVWSS 260 (304)
T ss_dssp ESHHHHGG
T ss_pred EehHHhCc
Confidence 88655433
No 493
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A*
Probab=41.00 E-value=53 Score=31.37 Aligned_cols=55 Identities=7% Similarity=0.033 Sum_probs=40.0
Q ss_pred HHHHHHHHHhCCCeeeccCCCCHHHHhccC--CCCC---HHHHHHHHHHHHHcCCeeeEeE
Q psy8190 158 ENQAYRLKKVGLDYYNHNLDTSPKLYGDII--STRD---YENRLNTLKNVRNVGINICCGG 213 (348)
Q Consensus 158 ~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~--~~~~---~~~~~~~i~~~~~~G~~i~~~~ 213 (348)
+|.++.|+++|++.+.+++ +=.+++..=. ...+ ++-.-+.++.+++.|+.+.+++
T Consensus 80 ~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL 139 (501)
T 1e4m_M 80 QKDIDVLDELNATGYRFSI-AWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTL 139 (501)
T ss_dssp HHHHHHHHHHTCSEEEEEC-CHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEccc-cHHhhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 5889999999999999988 3145544321 1123 6677888999999999876654
No 494
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=40.80 E-value=1.4e+02 Score=27.60 Aligned_cols=112 Identities=9% Similarity=0.004 Sum_probs=68.2
Q ss_pred cCHHHHHHHHHH-HHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCCCC-HHHHHHHHHhC-CCeeec
Q psy8190 98 LSIESVITAAQK-AKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGMLN-ENQAYRLKKVG-LDYYNH 174 (348)
Q Consensus 98 ~~~eei~~~~~~-~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~l~-~e~l~~Lk~aG-~~~i~~ 174 (348)
+++++.++.++. +.+++ -++|=.. ....+++.+.++-+.+.. .+++...--..+ ...++.+.+.| +|.+.+
T Consensus 261 ~t~~eai~~~~~ll~~y~--i~~IEdP---l~~dD~e~~~~L~~~~g~-~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~i 334 (417)
T 3qn3_A 261 FSSEALIERYVELCAKYP--ICSIEDG---LAENDFEGWIKLTEKLGN-KIQLVGDDLFVTNEDILREGIIKKMANAVLI 334 (417)
T ss_dssp ECHHHHHHHHHHHHHHSC--EEEEESS---SCTTCHHHHHHHHHHHTT-TSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred cCHHHHHHHHHHHHhhcc--eeEEecC---CCcccHHHHHHHHHhhCC-CCceecCCcccCCHHHHHHHHHhCCCCEEEe
Confidence 578898888876 55655 3334221 123456666666555421 356653333444 77777776665 565554
Q ss_pred cCCCCHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEeEeeec--CCCHHHHHHHHH
Q psy8190 175 NLDTSPKLYGDIISTRDYENRLNTLKNVRNVGINICCGGIIGL--SESRDQRAELIF 229 (348)
Q Consensus 175 g~et~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~~i~Gl--get~e~~~~~l~ 229 (348)
.+ .+-.+..+.+++.+.++.+|+.+ |+|+ |||.+.+..+|-
T Consensus 335 Kv----------~qiGGiTea~kia~lA~~~G~~v----~vsh~sgEt~d~~iadla 377 (417)
T 3qn3_A 335 KP----------NQIGTITQTMRTVRLAQRNNYKC----VMSHRSGESEDAFIADFA 377 (417)
T ss_dssp CH----------HHHCSHHHHHHHHHHHHHTTCEE----EEECCSSCCSCCHHHHHH
T ss_pred cC----------CCCCCHHHHHHHHHHHHHcCCeE----EEeCCCCCchHHHHHHHH
Confidence 22 22247789999999999999976 3444 788776665553
No 495
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=40.72 E-value=2e+02 Score=25.62 Aligned_cols=191 Identities=14% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHhCCCeeeccCCCCHHH
Q psy8190 104 ITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-IGLETCLTLGMLNENQAYRLKKVGLDYYNHNLDTSPKL 182 (348)
Q Consensus 104 ~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et~~e~ 182 (348)
...++.+.+.|+. +.++.....+.........++++.... ..+-..+..|.-.++..+.+..+|++.+.+++...++.
T Consensus 76 ~~~a~aa~~~G~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~ 154 (349)
T 1p0k_A 76 KSLARAASQAGIP-LAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEI 154 (349)
T ss_dssp HHHHHHHHHHTCC-EECCCCTTTTTCHHHHHHHHHHHHHCSSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC
T ss_pred HHHHHHHHHcCCc-EEeccchhcccCcccccceehhhhhCCCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhh
Q ss_pred HhccCCCCCHHHHHHHHHHHHHc-CCeeeEeEeeecCCCHHHHHHHHHHHHhcCCCCCeeecc-----cccccCCCCC--
Q psy8190 183 YGDIISTRDYENRLNTLKNVRNV-GINICCGGIIGLSESRDQRAELIFQLANLNPYPESVPIN-----NLVQIKGTPL-- 254 (348)
Q Consensus 183 l~~i~~~~~~~~~~~~i~~~~~~-G~~i~~~~i~Glget~e~~~~~l~~l~~l~~~~~~i~~~-----~l~P~~gT~l-- 254 (348)
+.... ...++.+++.++.+++. ++++..-++ |.+-+ .+.+..+.+.+ ++.|.+. .+.+.....-
T Consensus 155 ~~~~~-~~~~~~~~~~i~~vr~~~~~Pv~vK~~-~~~~~----~~~a~~a~~~G--ad~I~v~~~ggt~~~~~e~~r~~~ 226 (349)
T 1p0k_A 155 VMPEG-DRSFSGALKRIEQICSRVSVPVIVKEV-GFGMS----KASAGKLYEAG--AAAVDIGGYGGTNFSKIENLRRQR 226 (349)
T ss_dssp ---------CTTHHHHHHHHHHHCSSCEEEEEE-SSCCC----HHHHHHHHHHT--CSEEEEEC---------------C
T ss_pred cCCCC-CcchHHHHHHHHHHHHHcCCCEEEEec-CCCCC----HHHHHHHHHcC--CCEEEEcCCCCcchhhHHHhhccc
Q ss_pred -----CCCCCCCHHHHHHHHHHHHHHCCCCceeccccccccchhhHHHHHHhCcceeeeC
Q psy8190 255 -----YGSSILDPLEFIRTIAVARITMPTSRIRMSAGRKEMGETTQAFCFLAGANSIFYG 309 (348)
Q Consensus 255 -----~~~~~~~~~~~~~~~a~~R~~lp~~~i~~s~g~~~l~~~~~~~~l~~GAn~~~~~ 309 (348)
....+++.+.+.++.... ++..|-.++|-.+ ......++.+||+.++.|
T Consensus 227 ~~~~~~~~g~~~~~~l~~v~~~~----~~ipvia~GGI~~--~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 227 QISFFNSWGISTAASLAEIRSEF----PASTMIASGGLQD--ALDVAKAIALGASCTGMA 280 (349)
T ss_dssp CGGGGTTCSCCHHHHHHHHHHHC----TTSEEEEESSCCS--HHHHHHHHHTTCSEEEEC
T ss_pred chhhhhccCccHHHHHHHHHHhc----CCCeEEEECCCCC--HHHHHHHHHcCCCEEEEc
No 496
>1b22_A DNA repair protein RAD51; DNA binding, riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.60.4.1
Probab=40.71 E-value=29 Score=25.99 Aligned_cols=53 Identities=15% Similarity=0.161 Sum_probs=32.1
Q ss_pred CCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCC--CCCHHHHHHHHHHHHHcCC
Q psy8190 155 MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIIS--TRDYENRLNTLKNVRNVGI 207 (348)
Q Consensus 155 ~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~--~~~~~~~~~~i~~~~~~G~ 207 (348)
.+.+..++.|+++|+.++.-=..++++-+..+.. ....+.+++..+.+...||
T Consensus 32 GIg~~~i~kL~eAG~~Tve~va~a~~~eL~~i~GIse~ka~kIi~aA~kl~~~gF 86 (114)
T 1b22_A 32 GINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGF 86 (114)
T ss_dssp TCSHHHHHHHHTTCCSSGGGBTSSBHHHHHTTTTCSTTHHHHHHHHHHHHSCCC-
T ss_pred CCCHHHHHHHHHcCcCcHHHHHhCCHHHHHHccCCCHHHHHHHHHHHHHHcccCC
Confidence 3667889999999999987444446666655532 2244555555444433343
No 497
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=40.68 E-value=2.3e+02 Score=26.47 Aligned_cols=103 Identities=14% Similarity=0.155 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHh-c-CcEEEEecCCCCHHHHHHHHHhCCCeeeccCCC-C
Q psy8190 103 VITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKK-I-GLETCLTLGMLNENQAYRLKKVGLDYYNHNLDT-S 179 (348)
Q Consensus 103 i~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~-~-~~~i~~~~g~l~~e~l~~Lk~aG~~~i~~g~et-~ 179 (348)
..+.++.+.+.|+..+.+++...+. +.+.+.++.+++ . ++.+. ..+..+.+.+..+.++|++.+.+|... +
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g~~-----~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg~g~g~ 307 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHGHS-----AGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAGVDVVKVGIGPGS 307 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCTTC-----HHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTTCSEEEECSSCCT
T ss_pred HHHHHHHHHHcCCCeEEEeeecCcc-----hhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcCCCEEEECccCCc
Q ss_pred ---HHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe
Q psy8190 180 ---PKLYGDIISTRDYENRLNTLKNVRNVGINICCG 212 (348)
Q Consensus 180 ---~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~ 212 (348)
...+.....+ +.+...+....+++.++++..+
T Consensus 308 ~~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~ 342 (491)
T 1zfj_A 308 ICTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIAD 342 (491)
T ss_dssp TBCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEE
T ss_pred ceEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEee
No 498
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=40.67 E-value=65 Score=27.69 Aligned_cols=67 Identities=10% Similarity=0.080 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcccHHHHHHHHHHHHhcCcEEEEecCC----CCHHHHHHHHHhCCCeeecc
Q psy8190 100 IESVITAAQKAKSDGATRFCMGAAWRELKDRDLDNIENMICEVKKIGLETCLTLGM----LNENQAYRLKKVGLDYYNHN 175 (348)
Q Consensus 100 ~eei~~~~~~~~~~G~~~i~l~gg~~~~~~~~~~~~~~l~~~i~~~~~~i~~~~g~----l~~e~l~~Lk~aG~~~i~~g 175 (348)
.+++++.++.+.+.|...+++-+- .+.+.+.++.+.+. ..+.+...++. ++ .+.|.+.|+.+++++
T Consensus 167 ~~~ai~ra~a~~eAGAd~i~~e~~------~~~~~~~~i~~~~~-~P~n~~~~~~~~~p~~~---~~eL~~lGv~~v~~~ 236 (255)
T 2qiw_A 167 MVEAIKRIKLMEQAGARSVYPVGL------STAEQVERLVDAVS-VPVNITAHPVDGHGAGD---LATLAGLGVRRVTFG 236 (255)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCC------CSHHHHHHHHTTCS-SCBEEECBTTTBBTTBC---HHHHHHTTCCEEECT
T ss_pred HHHHHHHHHHHHHcCCcEEEEcCC------CCHHHHHHHHHhCC-CCEEEEecCCCCCCCCC---HHHHHHcCCCEEEEH
Q ss_pred C
Q psy8190 176 L 176 (348)
Q Consensus 176 ~ 176 (348)
.
T Consensus 237 ~ 237 (255)
T 2qiw_A 237 P 237 (255)
T ss_dssp T
T ss_pred H
No 499
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=40.51 E-value=2.3e+02 Score=26.33 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=57.9
Q ss_pred HHHHHhCCCCEEEEeccCCCCC-cccHHHHHHHHHHHHhcCcEEEEecCC--C-----CHHHHHHHHHhCCCeeecc-CC
Q psy8190 107 AQKAKSDGATRFCMGAAWRELK-DRDLDNIENMICEVKKIGLETCLTLGM--L-----NENQAYRLKKVGLDYYNHN-LD 177 (348)
Q Consensus 107 ~~~~~~~G~~~i~l~gg~~~~~-~~~~~~~~~l~~~i~~~~~~i~~~~g~--l-----~~e~l~~Lk~aG~~~i~~g-~e 177 (348)
+++..+.|+..|..... ..|. ..+.+.+.++++.+++.+..+.+++.. . ..+.+...+++|+ ++.+. +.
T Consensus 173 ~~~~~~~Ga~g~~~~~~-y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~~~~a~~e~i~la~~~g~-~v~i~H~s 250 (480)
T 3gip_A 173 LQAALEAGAVGFSTGLA-YQPGAVAQAAELEGLARVAAERRRLHTSHIRNEADGVEAAVEEVLAIGRGTGC-ATVVSHHK 250 (480)
T ss_dssp HHHHHHHTCCEEEEETT-STTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSSTTHHHHHHHHHHHHHHHCC-EEEETTCC
T ss_pred HHHHHHCCCcEEeecCc-cCCcccCCHHHHHHHHHHHHHcCCEEEEEecCccccHHHHHHHHHHHHHHhCC-CEEEEEEe
Confidence 33334678888766533 1121 235678888888888888777665432 1 1245555566675 34432 22
Q ss_pred C-CHHHHhccCCCCCHHHHHHHHHHHHHcCCeeeEe
Q psy8190 178 T-SPKLYGDIISTRDYENRLNTLKNVRNVGINICCG 212 (348)
Q Consensus 178 t-~~e~l~~i~~~~~~~~~~~~i~~~~~~G~~i~~~ 212 (348)
+ .+..+ ....+.++.++.+++.|+.+.++
T Consensus 251 ~~~~~~~------~~~~~~l~~i~~a~~~G~~Vt~e 280 (480)
T 3gip_A 251 CMMPQNW------GRSRATLANIDRAREQGVEVALD 280 (480)
T ss_dssp CCSGGGT------TTHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCccch------hhHHHHHHHHHHHHHcCCceEEE
Confidence 2 11111 13578889999999999877653
No 500
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=40.46 E-value=58 Score=28.40 Aligned_cols=121 Identities=13% Similarity=0.160 Sum_probs=63.8
Q ss_pred CCCHHHHHHHHHhCCCeeeccCCCCHHHHhccCCCC-----CHHHHHHHHHHHHHcCCeeeEeEee--ec-CC---CHHH
Q psy8190 155 MLNENQAYRLKKVGLDYYNHNLDTSPKLYGDIISTR-----DYENRLNTLKNVRNVGINICCGGII--GL-SE---SRDQ 223 (348)
Q Consensus 155 ~l~~e~l~~Lk~aG~~~i~~g~et~~e~l~~i~~~~-----~~~~~~~~i~~~~~~G~~i~~~~i~--Gl-ge---t~e~ 223 (348)
.++++.++.|++.|++.|-+.+.-. .+... .... .++...+.++.+++.|+.+..++-. +. .. ..+.
T Consensus 33 ~~~~~d~~~l~~~G~n~vR~~i~w~-~~~~~-~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~~~~~~~~~~~~~~ 110 (317)
T 3aof_A 33 VIKDEFFDIIKEAGFSHVRIPIRWS-THAYA-FPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKER 110 (317)
T ss_dssp CCCTHHHHHHHHHTCSEEEECCCGG-GGBCS-STTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHHCHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEEeccHH-HhcCC-CCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHH
Confidence 3578999999999999998875310 01000 0111 2566678899999999987655321 11 11 1233
Q ss_pred HHHHHHHHH-hcCCCCCeeecccccccCCCCCCCCCCCCHHH----HHHHHHHHHHHCCCCceecc
Q psy8190 224 RAELIFQLA-NLNPYPESVPINNLVQIKGTPLYGSSILDPLE----FIRTIAVARITMPTSRIRMS 284 (348)
Q Consensus 224 ~~~~l~~l~-~l~~~~~~i~~~~l~P~~gT~l~~~~~~~~~~----~~~~~a~~R~~lp~~~i~~s 284 (348)
+.+.+..+. .++..+..+.+ .+.=+|..+ .+... ..+++...|..-|+..|-+.
T Consensus 111 ~~~~~~~ia~~~~~~~~v~~~-el~NEP~~~------~~~~~~~~~~~~~~~~iR~~~p~~~i~v~ 169 (317)
T 3aof_A 111 FLALWKQIADRYKDYPETLFF-EILNAPHGN------LTPEKWNELLEEALKVIRSIDKKHTIIIG 169 (317)
T ss_dssp HHHHHHHHHHHHTTSCTTEEE-ECCSSCCTT------SCHHHHHHHHHHHHHHHHHHCSSSCEEEC
T ss_pred HHHHHHHHHHHhcCCCCeEEE-EeccCCCCC------CCHHHHHHHHHHHHHHHHhhCCCCEEEEC
Confidence 334443332 33322323332 222233221 23333 35567778888787655443
Done!