Query psy8194
Match_columns 428
No_of_seqs 260 out of 1633
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 21:00:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k92_A NAD-GDH, NAD-specific g 100.0 2E-130 6E-135 1008.0 41.7 412 15-428 12-423 (424)
2 3aog_A Glutamate dehydrogenase 100.0 2E-126 8E-131 982.5 46.5 419 8-428 20-438 (440)
3 3aoe_E Glutamate dehydrogenase 100.0 1E-125 4E-130 973.6 43.7 413 11-428 5-417 (419)
4 3r3j_A Glutamate dehydrogenase 100.0 2E-126 8E-131 981.2 38.2 413 14-428 27-455 (456)
5 3mw9_A GDH 1, glutamate dehydr 100.0 6E-125 2E-129 978.0 44.5 412 15-428 4-498 (501)
6 2yfq_A Padgh, NAD-GDH, NAD-spe 100.0 2E-125 8E-130 973.1 40.1 412 16-428 3-420 (421)
7 2tmg_A Protein (glutamate dehy 100.0 6E-123 2E-127 953.2 44.8 411 17-428 2-413 (415)
8 2bma_A Glutamate dehydrogenase 100.0 1E-123 4E-128 965.6 39.2 412 15-428 41-469 (470)
9 1v9l_A Glutamate dehydrogenase 100.0 6E-124 2E-128 961.1 37.1 411 17-428 3-420 (421)
10 4fcc_A Glutamate dehydrogenase 100.0 2E-122 7E-127 952.4 40.0 412 15-428 22-449 (450)
11 1bgv_A Glutamate dehydrogenase 100.0 4E-120 1E-124 938.0 38.0 413 15-428 16-447 (449)
12 1gtm_A Glutamate dehydrogenase 100.0 2E-109 7E-114 856.2 44.1 411 17-428 2-416 (419)
13 1c1d_A L-phenylalanine dehydro 100.0 4.3E-90 1.5E-94 697.8 30.2 336 46-426 8-352 (355)
14 1leh_A Leucine dehydrogenase; 100.0 3.3E-86 1.1E-90 672.5 29.1 336 46-428 10-352 (364)
15 3ing_A Homoserine dehydrogenas 98.3 1.2E-06 4E-11 87.4 9.6 169 223-405 3-200 (325)
16 2o4c_A Erythronate-4-phosphate 98.2 1.1E-05 3.8E-10 82.0 13.3 158 153-350 60-229 (380)
17 2d5c_A AROE, shikimate 5-dehyd 98.0 0.00015 5.3E-09 69.1 16.5 135 212-368 105-244 (263)
18 3do5_A HOM, homoserine dehydro 98.0 2.1E-05 7.2E-10 78.4 9.5 168 225-405 3-199 (327)
19 3n58_A Adenosylhomocysteinase; 97.9 3E-05 1E-09 80.2 10.3 109 205-334 227-338 (464)
20 3h9u_A Adenosylhomocysteinase; 97.9 8.2E-05 2.8E-09 76.8 12.5 98 216-334 203-302 (436)
21 1nyt_A Shikimate 5-dehydrogena 97.9 0.00066 2.3E-08 65.2 17.9 128 203-350 102-235 (271)
22 2hk9_A Shikimate dehydrogenase 97.9 0.0003 1E-08 67.8 15.4 143 202-369 111-258 (275)
23 3gvp_A Adenosylhomocysteinase 97.9 7.6E-05 2.6E-09 76.9 11.7 108 203-334 202-311 (435)
24 3d4o_A Dipicolinate synthase s 97.8 9E-05 3.1E-09 72.1 11.4 116 214-350 145-263 (293)
25 2rir_A Dipicolinate synthase, 97.8 0.00023 8E-09 69.3 13.7 117 216-353 149-270 (300)
26 1vl6_A Malate oxidoreductase; 97.8 0.00013 4.6E-09 74.1 11.3 124 202-334 170-297 (388)
27 2j6i_A Formate dehydrogenase; 97.6 0.00038 1.3E-08 70.2 12.8 110 219-348 159-277 (364)
28 3o8q_A Shikimate 5-dehydrogena 97.6 0.0017 5.8E-08 63.2 16.5 126 204-350 110-242 (281)
29 3oet_A Erythronate-4-phosphate 97.6 0.00053 1.8E-08 69.7 12.9 174 200-398 95-282 (381)
30 3jtm_A Formate dehydrogenase, 97.6 0.001 3.4E-08 66.9 14.8 116 219-354 159-283 (351)
31 2egg_A AROE, shikimate 5-dehyd 97.6 0.0015 5.2E-08 63.7 15.7 130 203-353 123-263 (297)
32 4dll_A 2-hydroxy-3-oxopropiona 97.5 0.00091 3.1E-08 65.7 13.7 171 222-414 29-234 (320)
33 4gbj_A 6-phosphogluconate dehy 97.5 0.00077 2.6E-08 65.8 13.0 168 225-414 6-209 (297)
34 1p77_A Shikimate 5-dehydrogena 97.5 0.001 3.5E-08 64.0 13.6 128 204-351 103-237 (272)
35 3l6d_A Putative oxidoreductase 97.5 0.0022 7.4E-08 62.5 16.0 175 221-415 6-212 (306)
36 3obb_A Probable 3-hydroxyisobu 97.5 0.0014 4.9E-08 64.1 14.3 168 225-414 4-208 (300)
37 3g0o_A 3-hydroxyisobutyrate de 97.5 0.0014 4.7E-08 63.7 14.0 170 223-414 6-214 (303)
38 4e5n_A Thermostable phosphite 97.5 0.00056 1.9E-08 68.0 11.1 109 219-348 140-256 (330)
39 3pwz_A Shikimate dehydrogenase 97.5 0.0019 6.4E-08 62.6 14.4 127 204-350 103-236 (272)
40 2w2k_A D-mandelate dehydrogena 97.4 0.001 3.6E-08 66.5 12.0 117 219-355 158-284 (348)
41 2ekl_A D-3-phosphoglycerate de 97.4 0.0028 9.7E-08 62.4 14.9 107 219-347 137-251 (313)
42 3gg9_A D-3-phosphoglycerate de 97.4 0.00079 2.7E-08 67.6 10.8 109 219-348 155-271 (352)
43 2zyd_A 6-phosphogluconate dehy 97.4 0.0026 9.1E-08 66.2 15.1 177 221-414 12-231 (480)
44 3pef_A 6-phosphogluconate dehy 97.4 0.0022 7.4E-08 61.6 13.5 170 225-416 2-208 (287)
45 2nac_A NAD-dependent formate d 97.4 0.0028 9.4E-08 64.6 14.8 109 219-347 186-302 (393)
46 2h78_A Hibadh, 3-hydroxyisobut 97.3 0.0033 1.1E-07 60.6 14.7 168 225-414 4-208 (302)
47 3qha_A Putative oxidoreductase 97.3 0.00057 2E-08 66.3 9.2 167 224-413 15-215 (296)
48 4e21_A 6-phosphogluconate dehy 97.3 0.00035 1.2E-08 70.3 7.8 112 222-354 20-141 (358)
49 3ond_A Adenosylhomocysteinase; 97.3 0.0013 4.5E-08 68.7 12.3 106 206-332 246-354 (488)
50 3fbt_A Chorismate mutase and s 97.3 0.0042 1.4E-07 60.5 15.1 122 204-350 106-234 (282)
51 3doj_A AT3G25530, dehydrogenas 97.3 0.0017 5.9E-08 63.3 12.2 172 223-416 20-228 (310)
52 1mx3_A CTBP1, C-terminal bindi 97.3 0.0016 5.3E-08 65.3 12.0 108 220-348 164-279 (347)
53 2iz1_A 6-phosphogluconate dehy 97.2 0.0044 1.5E-07 64.3 14.7 174 224-414 5-222 (474)
54 2gcg_A Glyoxylate reductase/hy 97.2 0.0012 4.1E-08 65.4 10.0 108 220-348 151-266 (330)
55 4gwg_A 6-phosphogluconate dehy 97.2 0.0044 1.5E-07 64.7 14.7 176 223-414 3-221 (484)
56 4hy3_A Phosphoglycerate oxidor 97.2 0.0018 6.3E-08 65.3 11.3 114 219-354 171-292 (365)
57 4g2n_A D-isomer specific 2-hyd 97.2 0.0015 5.1E-08 65.5 10.5 108 219-348 168-283 (345)
58 2d0i_A Dehydrogenase; structur 97.2 0.00059 2E-08 67.9 7.4 107 220-348 142-255 (333)
59 2a9f_A Putative malic enzyme ( 97.2 0.00072 2.5E-08 68.9 8.0 123 203-334 167-292 (398)
60 3evt_A Phosphoglycerate dehydr 97.2 0.0015 5.2E-08 64.8 10.2 115 219-355 132-255 (324)
61 3jyo_A Quinate/shikimate dehyd 97.1 0.0034 1.2E-07 61.0 12.2 129 204-350 111-249 (283)
62 3pdu_A 3-hydroxyisobutyrate de 97.1 0.0018 6.3E-08 62.1 10.2 170 225-416 2-208 (287)
63 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.1 0.0061 2.1E-07 63.4 14.7 178 225-415 2-221 (478)
64 1nvt_A Shikimate 5'-dehydrogen 97.1 0.0069 2.4E-07 58.4 14.1 131 202-351 110-251 (287)
65 2pi1_A D-lactate dehydrogenase 97.1 0.0014 4.6E-08 65.4 9.2 107 219-348 136-250 (334)
66 2i99_A MU-crystallin homolog; 97.1 0.002 6.8E-08 63.2 10.0 113 221-352 132-249 (312)
67 3d1l_A Putative NADP oxidoredu 97.1 0.00084 2.9E-08 63.5 7.0 95 221-334 7-106 (266)
68 3tnl_A Shikimate dehydrogenase 97.1 0.0046 1.6E-07 61.2 12.5 133 204-350 138-283 (315)
69 3c8m_A Homoserine dehydrogenas 97.1 0.0005 1.7E-08 68.3 5.6 172 223-405 5-204 (331)
70 2g76_A 3-PGDH, D-3-phosphoglyc 97.0 0.0018 6.1E-08 64.6 9.4 108 219-348 160-275 (335)
71 4dgs_A Dehydrogenase; structur 97.0 0.0022 7.6E-08 64.1 10.0 105 219-348 166-278 (340)
72 1ygy_A PGDH, D-3-phosphoglycer 97.0 0.0026 9E-08 67.0 11.1 107 219-347 137-251 (529)
73 1wwk_A Phosphoglycerate dehydr 97.0 0.0012 4.1E-08 64.9 7.8 107 220-348 138-252 (307)
74 3hg7_A D-isomer specific 2-hyd 97.0 0.0014 4.9E-08 65.0 8.3 108 219-348 135-250 (324)
75 3d64_A Adenosylhomocysteinase; 97.0 0.002 6.7E-08 67.6 9.5 107 217-344 270-380 (494)
76 1gdh_A D-glycerate dehydrogena 97.0 0.0046 1.6E-07 61.0 11.7 108 220-348 142-258 (320)
77 1v8b_A Adenosylhomocysteinase; 97.0 0.0032 1.1E-07 65.7 11.0 97 217-334 250-348 (479)
78 2p4q_A 6-phosphogluconate dehy 97.0 0.0083 2.8E-07 62.8 14.1 174 224-414 10-226 (497)
79 1ebf_A Homoserine dehydrogenas 97.0 0.00065 2.2E-08 68.3 5.4 170 223-405 3-205 (358)
80 1pj3_A NAD-dependent malic enz 96.9 0.0016 5.6E-08 68.7 8.4 181 128-334 205-403 (564)
81 3dtt_A NADP oxidoreductase; st 96.9 0.0011 3.6E-08 62.6 6.3 96 218-332 13-126 (245)
82 2pgd_A 6-phosphogluconate dehy 96.9 0.011 3.9E-07 61.4 14.6 174 225-415 3-220 (482)
83 3ce6_A Adenosylhomocysteinase; 96.9 0.0033 1.1E-07 65.9 10.5 94 219-333 269-364 (494)
84 3ba1_A HPPR, hydroxyphenylpyru 96.9 0.0052 1.8E-07 61.1 11.3 105 219-348 159-271 (333)
85 3c85_A Putative glutathione-re 96.9 0.0018 6.3E-08 57.7 7.2 109 221-349 36-155 (183)
86 1a4i_A Methylenetetrahydrofola 96.9 0.0047 1.6E-07 60.7 10.6 96 199-334 144-241 (301)
87 1vpd_A Tartronate semialdehyde 96.9 0.0098 3.3E-07 56.9 12.8 170 225-414 6-210 (299)
88 1gq2_A Malic enzyme; oxidoredu 96.9 0.0023 7.8E-08 67.4 8.8 178 128-334 203-398 (555)
89 2dbq_A Glyoxylate reductase; D 96.9 0.0049 1.7E-07 61.1 10.9 108 219-348 145-260 (334)
90 3llv_A Exopolyphosphatase-rela 96.9 0.00096 3.3E-08 56.8 4.9 106 223-348 5-118 (141)
91 1o0s_A NAD-ME, NAD-dependent m 96.8 0.0023 7.8E-08 67.9 8.3 178 129-334 242-436 (605)
92 3k5p_A D-3-phosphoglycerate de 96.8 0.0075 2.6E-07 61.9 11.9 112 219-354 151-271 (416)
93 3ezy_A Dehydrogenase; structur 96.8 0.0017 5.8E-08 64.0 7.0 127 225-368 3-137 (344)
94 2yq5_A D-isomer specific 2-hyd 96.8 0.0026 9.1E-08 63.6 8.3 113 219-355 143-264 (343)
95 2cvz_A Dehydrogenase, 3-hydrox 96.8 0.011 3.8E-07 56.1 12.4 164 225-412 2-198 (289)
96 3fwz_A Inner membrane protein 96.8 0.0027 9.4E-08 54.4 7.1 101 225-348 8-120 (140)
97 3uuw_A Putative oxidoreductase 96.8 0.0013 4.5E-08 63.7 5.5 113 222-353 4-124 (308)
98 3cky_A 2-hydroxymethyl glutara 96.7 0.002 6.9E-08 61.9 6.7 108 224-351 4-121 (301)
99 2ho3_A Oxidoreductase, GFO/IDH 96.7 0.0029 9.8E-08 61.8 7.9 111 225-353 2-120 (325)
100 2gf2_A Hibadh, 3-hydroxyisobut 96.7 0.014 4.6E-07 55.8 12.5 167 225-414 1-205 (296)
101 2glx_A 1,5-anhydro-D-fructose 96.7 0.0029 1E-07 61.7 7.9 107 225-351 1-118 (332)
102 3oj0_A Glutr, glutamyl-tRNA re 96.7 0.0048 1.6E-07 53.0 8.3 89 224-331 21-111 (144)
103 3phh_A Shikimate dehydrogenase 96.7 0.019 6.3E-07 55.6 13.1 116 204-350 106-228 (269)
104 1qp8_A Formate dehydrogenase; 96.7 0.0043 1.5E-07 60.8 8.7 102 221-348 121-230 (303)
105 3t4e_A Quinate/shikimate dehyd 96.7 0.013 4.4E-07 57.8 12.0 132 204-350 132-277 (312)
106 1lss_A TRK system potassium up 96.7 0.0026 8.7E-08 53.3 6.0 107 223-347 3-116 (140)
107 3mtj_A Homoserine dehydrogenas 96.7 0.0034 1.2E-07 64.9 8.1 159 223-405 9-194 (444)
108 3l9w_A Glutathione-regulated p 96.6 0.013 4.5E-07 59.8 12.3 150 224-399 4-163 (413)
109 3qy9_A DHPR, dihydrodipicolina 96.6 0.0053 1.8E-07 58.5 8.7 102 225-355 4-111 (243)
110 3l07_A Bifunctional protein fo 96.6 0.0043 1.5E-07 60.6 8.0 95 199-333 140-236 (285)
111 3pp8_A Glyoxylate/hydroxypyruv 96.6 0.0032 1.1E-07 62.2 7.3 107 220-348 135-249 (315)
112 1gpj_A Glutamyl-tRNA reductase 96.6 0.0097 3.3E-07 60.4 10.9 110 221-353 164-289 (404)
113 1yqg_A Pyrroline-5-carboxylate 96.6 0.0072 2.5E-07 56.8 9.3 103 225-349 1-106 (263)
114 3don_A Shikimate dehydrogenase 96.6 0.007 2.4E-07 58.7 9.4 124 204-350 101-230 (277)
115 2dvm_A Malic enzyme, 439AA lon 96.6 0.0034 1.2E-07 64.9 7.5 135 209-350 171-315 (439)
116 1xdw_A NAD+-dependent (R)-2-hy 96.6 0.003 1E-07 62.6 6.9 105 220-348 142-254 (331)
117 1sc6_A PGDH, D-3-phosphoglycer 96.6 0.014 4.6E-07 59.7 11.9 105 219-347 140-252 (404)
118 2dc1_A L-aspartate dehydrogena 96.6 0.0026 9.1E-08 59.4 6.1 98 225-349 1-105 (236)
119 4hkt_A Inositol 2-dehydrogenas 96.6 0.0085 2.9E-07 58.6 9.9 112 225-355 4-123 (331)
120 3cea_A MYO-inositol 2-dehydrog 96.6 0.0086 2.9E-07 58.7 9.9 110 223-352 7-129 (346)
121 3db2_A Putative NADPH-dependen 96.6 0.0069 2.3E-07 59.9 9.3 113 223-353 4-124 (354)
122 3rc1_A Sugar 3-ketoreductase; 96.5 0.0085 2.9E-07 59.4 9.8 114 222-353 25-147 (350)
123 3gvx_A Glycerate dehydrogenase 96.5 0.0042 1.4E-07 60.7 7.2 103 221-348 119-229 (290)
124 2cuk_A Glycerate dehydrogenase 96.5 0.01 3.5E-07 58.3 10.0 100 220-347 140-247 (311)
125 3p2o_A Bifunctional protein fo 96.5 0.0059 2E-07 59.6 8.1 96 199-334 139-236 (285)
126 2ahr_A Putative pyrroline carb 96.5 0.005 1.7E-07 57.9 7.3 105 225-350 4-109 (259)
127 1npy_A Hypothetical shikimate 96.5 0.058 2E-06 52.0 15.0 126 202-352 102-235 (271)
128 3tum_A Shikimate dehydrogenase 96.4 0.056 1.9E-06 52.1 14.3 128 204-350 109-245 (269)
129 4a26_A Putative C-1-tetrahydro 96.4 0.0078 2.7E-07 59.1 8.3 54 198-256 143-197 (300)
130 3b1f_A Putative prephenate deh 96.3 0.0061 2.1E-07 58.3 7.2 109 224-351 6-124 (290)
131 4a5o_A Bifunctional protein fo 96.3 0.0082 2.8E-07 58.6 7.9 96 199-334 140-237 (286)
132 3pid_A UDP-glucose 6-dehydroge 96.3 0.091 3.1E-06 54.1 16.1 184 218-416 30-270 (432)
133 1b0a_A Protein (fold bifunctio 96.3 0.008 2.7E-07 58.7 7.7 96 199-334 138-235 (288)
134 1omo_A Alanine dehydrogenase; 96.3 0.013 4.4E-07 57.7 9.4 113 222-350 123-238 (322)
135 3q2i_A Dehydrogenase; rossmann 96.3 0.0079 2.7E-07 59.4 7.8 108 223-351 12-131 (354)
136 3euw_A MYO-inositol dehydrogen 96.3 0.0094 3.2E-07 58.5 8.2 110 225-352 5-122 (344)
137 4had_A Probable oxidoreductase 96.3 0.0076 2.6E-07 59.2 7.5 111 225-352 24-143 (350)
138 1dxy_A D-2-hydroxyisocaproate 96.3 0.0069 2.4E-07 60.1 7.2 106 219-348 140-253 (333)
139 1x7d_A Ornithine cyclodeaminas 96.2 0.016 5.5E-07 57.9 9.6 117 222-354 127-250 (350)
140 2g82_O GAPDH, glyceraldehyde-3 96.2 0.047 1.6E-06 54.3 12.9 43 225-276 1-43 (331)
141 3gg2_A Sugar dehydrogenase, UD 96.2 0.14 4.7E-06 52.8 16.8 179 225-416 3-249 (450)
142 3e9m_A Oxidoreductase, GFO/IDH 96.2 0.0069 2.4E-07 59.4 6.6 115 223-354 4-126 (330)
143 3upl_A Oxidoreductase; rossman 96.1 0.0029 9.9E-08 65.5 3.7 134 223-369 22-180 (446)
144 4huj_A Uncharacterized protein 96.1 0.0091 3.1E-07 55.2 6.7 91 224-333 23-116 (220)
145 1j5p_A Aspartate dehydrogenase 96.1 0.0099 3.4E-07 57.0 7.0 88 223-338 11-100 (253)
146 4ezb_A Uncharacterized conserv 96.0 0.016 5.4E-07 56.8 8.5 169 225-408 25-224 (317)
147 3kux_A Putative oxidoreductase 96.0 0.023 7.8E-07 56.1 9.7 108 224-351 7-123 (352)
148 4h3v_A Oxidoreductase domain p 96.0 0.018 6.1E-07 56.7 8.8 115 222-353 4-136 (390)
149 1rm4_O Glyceraldehyde 3-phosph 96.0 0.068 2.3E-06 53.3 13.0 43 225-276 2-47 (337)
150 2hmt_A YUAA protein; RCK, KTN, 96.0 0.003 1E-07 53.1 2.7 33 222-255 4-36 (144)
151 3mz0_A Inositol 2-dehydrogenas 96.0 0.013 4.4E-07 57.6 7.7 109 225-349 3-120 (344)
152 3ohs_X Trans-1,2-dihydrobenzen 96.0 0.012 4.3E-07 57.5 7.4 109 225-353 3-124 (334)
153 1h6d_A Precursor form of gluco 95.9 0.014 4.6E-07 59.8 7.8 114 222-351 81-206 (433)
154 3ngx_A Bifunctional protein fo 95.9 0.016 5.4E-07 56.3 7.8 51 199-256 131-182 (276)
155 1tlt_A Putative oxidoreductase 95.9 0.0042 1.4E-07 60.4 3.7 108 223-352 4-122 (319)
156 1ydw_A AX110P-like protein; st 95.9 0.018 6.1E-07 57.0 8.4 110 224-350 6-126 (362)
157 2uyy_A N-PAC protein; long-cha 95.9 0.0089 3E-07 57.9 5.8 171 224-414 30-235 (316)
158 1p9l_A Dihydrodipicolinate red 95.8 0.03 1E-06 53.3 9.2 82 225-342 1-87 (245)
159 3c1a_A Putative oxidoreductase 95.8 0.003 1E-07 61.4 2.3 106 224-352 10-126 (315)
160 3tri_A Pyrroline-5-carboxylate 95.8 0.011 3.6E-07 57.1 6.1 111 223-353 2-123 (280)
161 1dlj_A UDP-glucose dehydrogena 95.8 0.022 7.6E-07 57.7 8.7 117 225-354 1-143 (402)
162 3b1j_A Glyceraldehyde 3-phosph 95.8 0.11 3.6E-06 51.9 13.4 32 225-256 3-37 (339)
163 3h9e_O Glyceraldehyde-3-phosph 95.8 0.15 5E-06 51.0 14.2 43 224-274 7-49 (346)
164 3bio_A Oxidoreductase, GFO/IDH 95.8 0.021 7.2E-07 55.6 8.0 105 223-350 8-121 (304)
165 1zh8_A Oxidoreductase; TM0312, 95.8 0.032 1.1E-06 54.9 9.5 110 222-351 16-138 (340)
166 4fb5_A Probable oxidoreductase 95.8 0.017 5.8E-07 56.9 7.5 49 221-279 22-78 (393)
167 4dio_A NAD(P) transhydrogenase 95.8 0.024 8E-07 58.0 8.6 34 222-256 188-221 (405)
168 2d2i_A Glyceraldehyde 3-phosph 95.8 0.094 3.2E-06 53.1 12.9 32 225-256 3-37 (380)
169 3gdo_A Uncharacterized oxidore 95.8 0.019 6.6E-07 56.9 7.8 111 223-353 4-123 (358)
170 3ec7_A Putative dehydrogenase; 95.8 0.014 4.9E-07 57.9 6.9 113 221-349 20-141 (357)
171 3u62_A Shikimate dehydrogenase 95.7 0.0097 3.3E-07 56.9 5.2 123 204-353 95-222 (253)
172 3cps_A Glyceraldehyde 3-phosph 95.7 0.069 2.4E-06 53.6 11.6 97 225-330 18-138 (354)
173 3gt0_A Pyrroline-5-carboxylate 95.7 0.02 7E-07 53.6 7.3 109 225-353 3-122 (247)
174 3nv9_A Malic enzyme; rossmann 95.7 0.045 1.5E-06 56.7 10.3 165 140-332 153-329 (487)
175 2c2x_A Methylenetetrahydrofola 95.7 0.02 6.7E-07 55.8 7.3 95 199-333 137-235 (281)
176 1xea_A Oxidoreductase, GFO/IDH 95.7 0.031 1.1E-06 54.3 8.8 106 225-351 3-119 (323)
177 3l4b_C TRKA K+ channel protien 95.7 0.011 3.6E-07 54.3 5.1 105 225-348 1-114 (218)
178 2ejw_A HDH, homoserine dehydro 95.7 0.016 5.3E-07 57.7 6.6 73 224-318 3-84 (332)
179 3moi_A Probable dehydrogenase; 95.7 0.013 4.5E-07 58.7 6.2 106 224-350 2-119 (387)
180 3ggo_A Prephenate dehydrogenas 95.6 0.047 1.6E-06 53.5 9.9 94 222-333 31-131 (314)
181 1edz_A 5,10-methylenetetrahydr 95.6 0.024 8.2E-07 56.2 7.8 141 198-363 146-301 (320)
182 3g79_A NDP-N-acetyl-D-galactos 95.6 0.35 1.2E-05 50.3 16.9 33 223-256 17-51 (478)
183 2czc_A Glyceraldehyde-3-phosph 95.6 0.0057 2E-07 60.6 3.2 95 225-331 3-112 (334)
184 3qsg_A NAD-binding phosphogluc 95.6 0.022 7.4E-07 55.6 7.3 115 223-355 23-146 (312)
185 2q3e_A UDP-glucose 6-dehydroge 95.6 0.29 1E-05 50.4 16.2 179 225-415 6-257 (467)
186 2p2s_A Putative oxidoreductase 95.5 0.015 5.3E-07 56.8 6.1 108 223-350 3-121 (336)
187 3btv_A Galactose/lactose metab 95.5 0.0089 3E-07 61.2 4.5 111 223-351 19-151 (438)
188 3e18_A Oxidoreductase; dehydro 95.5 0.024 8.2E-07 56.3 7.5 110 222-350 3-120 (359)
189 4gqa_A NAD binding oxidoreduct 95.5 0.022 7.4E-07 57.4 7.3 69 224-308 26-104 (412)
190 1hdg_O Holo-D-glyceraldehyde-3 95.5 0.13 4.3E-06 51.1 12.6 32 225-256 1-35 (332)
191 2f1k_A Prephenate dehydrogenas 95.5 0.058 2E-06 51.0 9.8 90 225-333 1-94 (279)
192 1b7g_O Protein (glyceraldehyde 95.5 0.011 3.6E-07 59.0 4.8 94 225-331 2-110 (340)
193 1bg6_A N-(1-D-carboxylethyl)-L 95.5 0.031 1.1E-06 54.6 8.0 109 225-346 5-126 (359)
194 3e82_A Putative oxidoreductase 95.5 0.014 4.7E-07 58.2 5.5 107 223-352 6-124 (364)
195 3ic5_A Putative saccharopine d 95.5 0.022 7.4E-07 46.0 5.8 32 223-255 4-36 (118)
196 1obf_O Glyceraldehyde 3-phosph 95.4 0.13 4.5E-06 51.1 12.5 32 225-256 2-37 (335)
197 1ff9_A Saccharopine reductase; 95.4 0.011 3.9E-07 60.9 5.0 118 223-355 2-125 (450)
198 2ixa_A Alpha-N-acetylgalactosa 95.4 0.03 1E-06 57.2 7.9 114 222-350 18-146 (444)
199 2g5c_A Prephenate dehydrogenas 95.4 0.059 2E-06 51.0 9.5 102 225-344 2-112 (281)
200 2eez_A Alanine dehydrogenase; 95.4 0.019 6.5E-07 57.5 6.2 74 221-310 163-239 (369)
201 3u3x_A Oxidoreductase; structu 95.3 0.026 8.9E-07 56.1 7.0 113 223-352 25-145 (361)
202 1dih_A Dihydrodipicolinate red 95.3 0.0036 1.2E-07 60.5 0.7 115 223-353 4-129 (273)
203 3p2y_A Alanine dehydrogenase/p 95.3 0.049 1.7E-06 55.2 9.0 34 222-256 182-215 (381)
204 3ijp_A DHPR, dihydrodipicolina 95.3 0.006 2.1E-07 59.6 2.2 119 223-355 20-147 (288)
205 1u8f_O GAPDH, glyceraldehyde-3 95.3 0.1 3.5E-06 51.8 11.1 97 225-330 4-124 (335)
206 1z82_A Glycerol-3-phosphate de 95.3 0.09 3.1E-06 51.4 10.6 96 223-333 13-114 (335)
207 2x5j_O E4PDH, D-erythrose-4-ph 95.3 0.15 5E-06 50.8 12.2 32 225-256 3-38 (339)
208 1mv8_A GMD, GDP-mannose 6-dehy 95.3 0.34 1.1E-05 49.4 15.2 41 225-276 1-41 (436)
209 3cmc_O GAPDH, glyceraldehyde-3 95.2 0.12 4.2E-06 51.3 11.5 32 225-256 2-34 (334)
210 2o3j_A UDP-glucose 6-dehydroge 95.2 0.16 5.3E-06 52.8 12.7 178 225-416 10-264 (481)
211 2vhw_A Alanine dehydrogenase; 95.2 0.016 5.3E-07 58.4 4.9 74 221-309 165-240 (377)
212 2nvw_A Galactose/lactose metab 95.2 0.045 1.5E-06 56.8 8.4 110 223-350 38-170 (479)
213 3kb6_A D-lactate dehydrogenase 95.1 0.02 7E-07 56.8 5.6 106 219-347 136-249 (334)
214 2yyy_A Glyceraldehyde-3-phosph 95.1 0.025 8.7E-07 56.4 6.1 32 225-256 3-35 (343)
215 1nvm_B Acetaldehyde dehydrogen 95.1 0.012 4.1E-07 58.0 3.6 89 224-329 4-104 (312)
216 1f06_A MESO-diaminopimelate D- 95.1 0.027 9.2E-07 55.3 6.1 93 223-338 2-98 (320)
217 2z2v_A Hypothetical protein PH 95.0 0.024 8.1E-07 56.9 5.7 120 219-354 11-133 (365)
218 3m2t_A Probable dehydrogenase; 95.0 0.02 6.9E-07 56.8 5.2 110 222-351 3-124 (359)
219 3ojo_A CAP5O; rossmann fold, c 95.0 1.4 4.9E-05 45.1 18.9 177 223-415 10-251 (431)
220 3dfz_A SIRC, precorrin-2 dehyd 95.0 0.043 1.5E-06 51.6 6.9 81 220-316 27-107 (223)
221 3e5r_O PP38, glyceraldehyde-3- 95.0 0.17 5.7E-06 50.4 11.6 97 225-330 4-126 (337)
222 1yb4_A Tartronic semialdehyde 95.0 0.014 4.7E-07 55.7 3.6 105 225-350 4-118 (295)
223 2o7s_A DHQ-SDH PR, bifunctiona 95.0 0.44 1.5E-05 49.8 15.4 132 202-350 333-480 (523)
224 2vns_A Metalloreductase steap3 94.8 0.044 1.5E-06 50.4 6.6 90 223-334 27-119 (215)
225 1zej_A HBD-9, 3-hydroxyacyl-CO 94.8 0.085 2.9E-06 51.4 8.9 74 223-312 11-85 (293)
226 3c24_A Putative oxidoreductase 94.8 0.052 1.8E-06 51.8 7.1 87 225-333 12-104 (286)
227 3evn_A Oxidoreductase, GFO/IDH 94.7 0.017 5.7E-07 56.5 3.5 111 223-350 4-122 (329)
228 1cf2_P Protein (glyceraldehyde 94.7 0.0084 2.9E-07 59.7 1.3 95 225-331 2-111 (337)
229 2ep7_A GAPDH, glyceraldehyde-3 94.5 0.15 5.1E-06 50.9 10.0 32 225-256 3-35 (342)
230 1f0y_A HCDH, L-3-hydroxyacyl-C 94.5 0.069 2.4E-06 51.4 7.2 30 225-255 16-45 (302)
231 4ew6_A D-galactose-1-dehydroge 94.4 0.041 1.4E-06 54.1 5.6 37 221-257 22-60 (330)
232 2ew2_A 2-dehydropantoate 2-red 94.4 0.074 2.5E-06 50.6 7.2 108 225-345 4-124 (316)
233 2axq_A Saccharopine dehydrogen 94.4 0.046 1.6E-06 56.7 6.1 121 218-356 17-146 (467)
234 4a7p_A UDP-glucose dehydrogena 94.4 0.84 2.9E-05 46.9 15.6 181 224-417 8-254 (446)
235 1y81_A Conserved hypothetical 94.4 0.15 5.1E-06 43.9 8.5 115 219-363 8-130 (138)
236 1gad_O D-glyceraldehyde-3-phos 94.4 0.31 1.1E-05 48.3 11.8 32 225-256 2-34 (330)
237 2rcy_A Pyrroline carboxylate r 94.4 0.045 1.5E-06 51.2 5.5 106 223-354 3-117 (262)
238 3abi_A Putative uncharacterize 94.3 0.045 1.6E-06 54.4 5.8 123 223-365 15-143 (365)
239 1np3_A Ketol-acid reductoisome 94.2 0.026 8.7E-07 55.9 3.6 34 222-256 14-47 (338)
240 2g1u_A Hypothetical protein TM 94.2 0.061 2.1E-06 46.5 5.6 36 219-255 14-49 (155)
241 3i23_A Oxidoreductase, GFO/IDH 94.2 0.087 3E-06 51.8 7.4 107 225-351 3-121 (349)
242 4f3y_A DHPR, dihydrodipicolina 94.2 0.02 6.9E-07 55.4 2.6 117 223-355 6-132 (272)
243 4e12_A Diketoreductase; oxidor 94.1 0.094 3.2E-06 50.2 7.4 40 225-275 5-44 (283)
244 3k96_A Glycerol-3-phosphate de 94.1 0.069 2.4E-06 53.3 6.5 101 222-334 27-137 (356)
245 3fhl_A Putative oxidoreductase 94.1 0.045 1.5E-06 54.2 5.1 111 223-353 4-123 (362)
246 4g65_A TRK system potassium up 94.0 0.022 7.4E-07 59.0 2.8 70 224-311 3-79 (461)
247 2dpo_A L-gulonate 3-dehydrogen 94.0 0.1 3.5E-06 51.4 7.4 41 224-275 6-46 (319)
248 2d59_A Hypothetical protein PH 94.0 0.19 6.4E-06 43.5 8.4 109 224-362 22-137 (144)
249 3ktd_A Prephenate dehydrogenas 94.0 0.053 1.8E-06 54.0 5.4 107 223-351 7-122 (341)
250 3dty_A Oxidoreductase, GFO/IDH 94.0 0.04 1.4E-06 55.4 4.5 116 222-352 10-142 (398)
251 3rwb_A TPLDH, pyridoxal 4-dehy 94.0 0.083 2.9E-06 49.2 6.4 46 221-277 3-49 (247)
252 1lu9_A Methylene tetrahydromet 93.9 0.17 6E-06 48.3 8.8 51 202-256 100-151 (287)
253 2y0c_A BCEC, UDP-glucose dehyd 93.9 0.9 3.1E-05 47.0 14.8 42 224-276 8-49 (478)
254 3o9z_A Lipopolysaccaride biosy 93.9 0.07 2.4E-06 52.0 5.9 108 225-350 4-127 (312)
255 2i76_A Hypothetical protein; N 93.7 0.04 1.4E-06 52.6 3.8 68 225-312 3-70 (276)
256 2nu8_A Succinyl-COA ligase [AD 93.7 0.087 3E-06 51.1 6.3 109 223-353 6-123 (288)
257 3f4l_A Putative oxidoreductase 93.7 0.02 6.8E-07 56.3 1.7 105 225-350 3-120 (345)
258 1pjc_A Protein (L-alanine dehy 93.7 0.076 2.6E-06 52.9 5.9 73 222-310 165-240 (361)
259 3h8v_A Ubiquitin-like modifier 93.7 0.061 2.1E-06 52.5 5.0 49 209-257 16-69 (292)
260 1r0k_A 1-deoxy-D-xylulose 5-ph 93.7 0.096 3.3E-06 53.2 6.6 117 225-352 5-149 (388)
261 2izz_A Pyrroline-5-carboxylate 93.6 0.16 5.4E-06 49.6 7.9 104 223-344 21-132 (322)
262 1i36_A Conserved hypothetical 93.5 0.14 4.8E-06 47.9 7.2 101 225-346 1-106 (264)
263 4e6p_A Probable sorbitol dehyd 93.5 0.077 2.6E-06 49.6 5.2 46 221-277 5-51 (259)
264 1id1_A Putative potassium chan 93.4 0.085 2.9E-06 45.4 5.1 106 223-348 2-120 (153)
265 1j4a_A D-LDH, D-lactate dehydr 93.3 0.068 2.3E-06 52.9 4.9 106 220-348 142-255 (333)
266 1kyq_A Met8P, siroheme biosynt 93.3 0.078 2.7E-06 51.3 5.1 35 220-254 9-43 (274)
267 4fs3_A Enoyl-[acyl-carrier-pro 93.1 0.089 3.1E-06 49.5 5.0 36 220-256 2-40 (256)
268 2b4r_O Glyceraldehyde-3-phosph 93.1 0.84 2.9E-05 45.5 12.3 36 221-256 8-44 (345)
269 4b4u_A Bifunctional protein fo 93.1 0.49 1.7E-05 46.4 10.3 53 199-256 158-211 (303)
270 1l7d_A Nicotinamide nucleotide 93.0 0.16 5.4E-06 51.0 7.0 36 221-257 169-204 (384)
271 1evy_A Glycerol-3-phosphate de 93.0 0.097 3.3E-06 51.7 5.3 95 226-333 17-127 (366)
272 3v5n_A Oxidoreductase; structu 92.8 0.18 6E-06 51.1 7.1 116 222-352 35-167 (417)
273 3keo_A Redox-sensing transcrip 92.7 0.051 1.7E-06 50.7 2.7 52 204-256 65-118 (212)
274 3pym_A GAPDH 3, glyceraldehyde 92.7 2.3 7.8E-05 42.1 14.7 43 225-275 2-45 (332)
275 3mog_A Probable 3-hydroxybutyr 92.6 0.21 7.3E-06 51.9 7.5 42 224-276 5-46 (483)
276 4eso_A Putative oxidoreductase 92.6 0.098 3.3E-06 49.0 4.5 46 221-277 5-51 (255)
277 1x13_A NAD(P) transhydrogenase 92.6 0.2 6.9E-06 50.8 7.1 35 222-257 170-204 (401)
278 2duw_A Putative COA-binding pr 92.6 0.33 1.1E-05 42.0 7.6 111 224-363 13-131 (145)
279 3two_A Mannitol dehydrogenase; 92.5 0.97 3.3E-05 44.0 11.8 109 223-350 176-289 (348)
280 3zv4_A CIS-2,3-dihydrobiphenyl 92.4 0.13 4.5E-06 48.8 5.3 46 221-277 2-48 (281)
281 1txg_A Glycerol-3-phosphate de 92.4 0.23 7.9E-06 47.8 7.1 109 225-344 1-124 (335)
282 4dqx_A Probable oxidoreductase 92.4 0.14 4.7E-06 48.7 5.3 47 220-277 23-70 (277)
283 3doc_A Glyceraldehyde 3-phosph 92.2 1.4 4.8E-05 43.7 12.5 42 225-275 3-47 (335)
284 3rd5_A Mypaa.01249.C; ssgcid, 92.2 0.13 4.4E-06 49.0 4.9 46 221-277 13-59 (291)
285 3grp_A 3-oxoacyl-(acyl carrier 92.1 0.12 4.1E-06 48.9 4.5 46 221-277 24-70 (266)
286 3oa2_A WBPB; oxidoreductase, s 92.0 0.1 3.4E-06 51.0 4.0 108 225-350 4-128 (318)
287 3n74_A 3-ketoacyl-(acyl-carrie 92.0 0.17 5.7E-06 47.0 5.4 47 220-277 5-52 (261)
288 3ff4_A Uncharacterized protein 92.0 0.41 1.4E-05 40.6 7.3 108 224-362 4-117 (122)
289 1hdc_A 3-alpha, 20 beta-hydrox 91.9 0.13 4.6E-06 47.9 4.6 34 221-255 2-36 (254)
290 3lvf_P GAPDH 1, glyceraldehyde 91.8 2 6.9E-05 42.6 13.1 41 225-274 5-46 (338)
291 1y1p_A ARII, aldehyde reductas 91.8 0.72 2.5E-05 43.8 9.7 35 221-255 8-43 (342)
292 3gvc_A Oxidoreductase, probabl 91.7 0.12 4.1E-06 49.2 4.0 46 221-277 26-72 (277)
293 3ak4_A NADH-dependent quinucli 91.6 0.21 7.2E-06 46.6 5.5 34 221-255 9-43 (263)
294 4dib_A GAPDH, glyceraldehyde 3 91.6 2 6.7E-05 42.8 12.7 41 225-274 5-46 (345)
295 3hja_A GAPDH, glyceraldehyde-3 91.5 0.56 1.9E-05 46.9 8.8 34 223-256 20-53 (356)
296 1oi7_A Succinyl-COA synthetase 91.5 0.16 5.5E-06 49.2 4.8 106 223-350 6-119 (288)
297 4hp8_A 2-deoxy-D-gluconate 3-d 91.5 0.54 1.8E-05 44.6 8.3 36 221-257 6-42 (247)
298 4g65_A TRK system potassium up 91.5 0.33 1.1E-05 50.0 7.4 117 211-348 221-348 (461)
299 2aef_A Calcium-gated potassium 91.4 0.1 3.6E-06 48.0 3.2 103 224-348 9-120 (234)
300 1x0v_A GPD-C, GPDH-C, glycerol 91.3 0.15 5.1E-06 49.8 4.4 104 223-333 7-127 (354)
301 4fn4_A Short chain dehydrogena 91.3 0.33 1.1E-05 46.2 6.7 45 221-276 4-49 (254)
302 3hwr_A 2-dehydropantoate 2-red 91.3 0.41 1.4E-05 46.5 7.5 99 221-335 16-125 (318)
303 3f9i_A 3-oxoacyl-[acyl-carrier 91.3 0.15 5.2E-06 47.0 4.2 47 220-277 10-57 (249)
304 2raf_A Putative dinucleotide-b 91.3 0.23 7.9E-06 45.3 5.3 37 219-256 14-50 (209)
305 2ew8_A (S)-1-phenylethanol deh 91.1 0.19 6.6E-06 46.6 4.7 33 221-253 4-37 (249)
306 3e8x_A Putative NAD-dependent 91.1 0.23 8E-06 45.2 5.2 35 221-255 18-53 (236)
307 3kkj_A Amine oxidase, flavin-c 91.1 0.21 7E-06 43.8 4.6 31 225-256 3-33 (336)
308 2vt3_A REX, redox-sensing tran 91.0 0.12 4E-06 48.2 3.1 38 218-256 80-119 (215)
309 1zcj_A Peroxisomal bifunctiona 90.9 0.75 2.6E-05 47.3 9.4 30 225-255 38-67 (463)
310 3tpc_A Short chain alcohol deh 90.9 0.097 3.3E-06 48.8 2.4 35 220-254 3-38 (257)
311 3op4_A 3-oxoacyl-[acyl-carrier 90.9 0.14 4.9E-06 47.5 3.6 34 221-255 6-40 (248)
312 3tzq_B Short-chain type dehydr 90.9 0.14 4.7E-06 48.4 3.5 36 220-256 7-43 (271)
313 4g81_D Putative hexonate dehyd 90.8 0.31 1.1E-05 46.3 6.0 44 221-275 6-50 (255)
314 3vku_A L-LDH, L-lactate dehydr 90.7 0.52 1.8E-05 46.6 7.6 76 222-309 7-85 (326)
315 3hdj_A Probable ornithine cycl 90.7 0.33 1.1E-05 47.6 6.1 148 187-355 88-239 (313)
316 1yde_A Retinal dehydrogenase/r 90.7 0.31 1.1E-05 45.9 5.8 35 220-255 5-40 (270)
317 1nff_A Putative oxidoreductase 90.6 0.24 8.2E-06 46.4 4.9 34 221-255 4-38 (260)
318 2qyt_A 2-dehydropantoate 2-red 90.6 0.13 4.6E-06 49.1 3.2 96 225-335 9-122 (317)
319 1hxh_A 3BETA/17BETA-hydroxyste 90.6 0.25 8.6E-06 45.9 5.0 34 221-255 3-37 (253)
320 4ina_A Saccharopine dehydrogen 90.6 0.26 8.8E-06 49.9 5.4 118 225-356 2-143 (405)
321 4dyv_A Short-chain dehydrogena 90.5 0.19 6.5E-06 47.7 4.1 47 221-278 25-72 (272)
322 4fgs_A Probable dehydrogenase 90.4 0.55 1.9E-05 45.1 7.3 52 217-279 22-74 (273)
323 1iuk_A Hypothetical protein TT 90.3 0.94 3.2E-05 38.9 8.1 113 223-364 12-132 (140)
324 3k6j_A Protein F01G10.3, confi 90.3 0.81 2.8E-05 47.4 8.9 31 225-256 55-85 (460)
325 2ozp_A N-acetyl-gamma-glutamyl 90.1 0.24 8.1E-06 49.2 4.6 32 225-256 5-38 (345)
326 1yj8_A Glycerol-3-phosphate de 90.1 0.25 8.4E-06 49.1 4.7 32 225-257 22-60 (375)
327 3h5n_A MCCB protein; ubiquitin 90.1 0.38 1.3E-05 47.9 6.0 36 222-257 116-151 (353)
328 3ip3_A Oxidoreductase, putativ 89.9 0.13 4.5E-06 50.3 2.5 111 225-348 3-120 (337)
329 3gpi_A NAD-dependent epimerase 89.9 0.3 1E-05 45.7 4.9 34 223-256 2-35 (286)
330 1xyg_A Putative N-acetyl-gamma 89.7 0.56 1.9E-05 46.8 6.9 34 223-256 15-50 (359)
331 3v1y_O PP38, glyceraldehyde-3- 89.6 2.4 8.3E-05 42.0 11.4 43 225-275 4-47 (337)
332 3uve_A Carveol dehydrogenase ( 89.6 0.27 9.2E-06 46.5 4.4 36 220-256 7-43 (286)
333 4b7c_A Probable oxidoreductase 89.6 0.79 2.7E-05 44.3 7.8 32 223-254 149-181 (336)
334 3eag_A UDP-N-acetylmuramate:L- 89.4 1.5 5.2E-05 42.7 9.8 33 224-257 4-37 (326)
335 1jw9_B Molybdopterin biosynthe 89.2 0.19 6.5E-06 47.4 2.9 36 222-257 29-64 (249)
336 3r1i_A Short-chain type dehydr 89.2 0.37 1.3E-05 45.6 5.0 35 221-256 29-64 (276)
337 1pjq_A CYSG, siroheme synthase 89.2 0.39 1.3E-05 49.4 5.5 35 220-254 8-42 (457)
338 2v6b_A L-LDH, L-lactate dehydr 89.1 1.2 4E-05 43.2 8.6 73 225-309 1-76 (304)
339 3dii_A Short-chain dehydrogena 89.1 0.35 1.2E-05 44.8 4.7 43 224-277 2-45 (247)
340 3r3s_A Oxidoreductase; structu 89.0 0.59 2E-05 44.6 6.4 34 221-255 46-80 (294)
341 1lc0_A Biliverdin reductase A; 88.9 0.68 2.3E-05 44.4 6.7 101 223-350 6-120 (294)
342 3m1a_A Putative dehydrogenase; 88.9 0.19 6.7E-06 47.2 2.8 34 221-254 2-36 (281)
343 3qiv_A Short-chain dehydrogena 88.8 0.87 3E-05 41.8 7.2 35 220-255 5-40 (253)
344 4ej6_A Putative zinc-binding d 88.8 1.7 5.8E-05 42.9 9.7 39 215-255 175-214 (370)
345 2d8a_A PH0655, probable L-thre 88.8 0.99 3.4E-05 44.0 8.0 31 223-253 167-198 (348)
346 2wtb_A MFP2, fatty acid multif 88.7 1.1 3.7E-05 48.9 8.8 30 225-255 313-342 (725)
347 1yqd_A Sinapyl alcohol dehydro 88.7 1.1 3.7E-05 44.2 8.2 42 214-255 178-219 (366)
348 3pqe_A L-LDH, L-lactate dehydr 88.6 0.76 2.6E-05 45.3 6.9 74 223-309 4-82 (326)
349 1cyd_A Carbonyl reductase; sho 88.5 1.8 6.2E-05 39.2 9.1 35 220-254 3-38 (244)
350 3svt_A Short-chain type dehydr 88.5 0.86 2.9E-05 42.9 7.0 36 219-255 6-42 (281)
351 3lk7_A UDP-N-acetylmuramoylala 88.5 0.39 1.3E-05 49.1 4.9 36 221-257 6-41 (451)
352 3o38_A Short chain dehydrogena 88.5 0.61 2.1E-05 43.3 5.9 34 221-255 19-54 (266)
353 3fbg_A Putative arginate lyase 88.4 2.4 8.3E-05 41.2 10.5 32 223-254 150-182 (346)
354 3ai3_A NADPH-sorbose reductase 88.4 1 3.5E-05 41.7 7.4 35 220-255 3-38 (263)
355 3i83_A 2-dehydropantoate 2-red 88.3 1.1 3.6E-05 43.4 7.7 109 225-348 3-124 (320)
356 1wdk_A Fatty oxidation complex 88.2 0.6 2.1E-05 50.8 6.5 32 223-255 313-344 (715)
357 4imr_A 3-oxoacyl-(acyl-carrier 88.2 0.61 2.1E-05 44.1 5.8 35 221-256 30-65 (275)
358 4gmf_A Yersiniabactin biosynth 88.2 0.4 1.4E-05 48.1 4.7 105 223-350 6-123 (372)
359 2zb4_A Prostaglandin reductase 88.1 1.2 4E-05 43.6 7.9 32 223-254 158-193 (357)
360 2dt5_A AT-rich DNA-binding pro 88.0 0.24 8.2E-06 45.9 2.7 48 207-256 64-113 (211)
361 1mxh_A Pteridine reductase 2; 88.0 0.46 1.6E-05 44.5 4.7 33 221-253 8-41 (276)
362 1lnq_A MTHK channels, potassiu 87.9 0.34 1.1E-05 47.2 3.8 103 224-348 115-226 (336)
363 3f1l_A Uncharacterized oxidore 87.8 1.1 3.7E-05 41.5 7.1 34 221-255 9-43 (252)
364 3a06_A 1-deoxy-D-xylulose 5-ph 87.8 0.98 3.4E-05 45.4 7.1 119 225-352 4-141 (376)
365 3oqb_A Oxidoreductase; structu 87.8 1 3.5E-05 44.5 7.4 110 222-351 4-139 (383)
366 4hb9_A Similarities with proba 87.7 0.56 1.9E-05 45.6 5.3 32 225-257 2-33 (412)
367 3ppi_A 3-hydroxyacyl-COA dehyd 87.6 0.87 3E-05 42.7 6.5 46 221-277 27-73 (281)
368 1hdo_A Biliverdin IX beta redu 87.6 0.73 2.5E-05 40.3 5.6 33 223-255 2-35 (206)
369 2ehd_A Oxidoreductase, oxidore 87.5 0.62 2.1E-05 42.2 5.2 32 223-254 4-36 (234)
370 1zud_1 Adenylyltransferase THI 87.5 0.37 1.3E-05 45.5 3.7 36 222-257 26-61 (251)
371 3gaz_A Alcohol dehydrogenase s 87.5 2.4 8.4E-05 41.2 9.8 31 223-253 150-181 (343)
372 2dph_A Formaldehyde dismutase; 87.5 1.3 4.5E-05 44.1 8.0 32 223-254 185-217 (398)
373 1kol_A Formaldehyde dehydrogen 87.4 1.4 4.9E-05 43.7 8.2 32 223-255 185-217 (398)
374 4gkb_A 3-oxoacyl-[acyl-carrier 87.3 1.8 6.2E-05 41.0 8.5 37 219-256 2-39 (258)
375 2yv2_A Succinyl-COA synthetase 87.2 0.81 2.8E-05 44.4 6.1 106 223-350 12-126 (297)
376 1a5z_A L-lactate dehydrogenase 87.2 1.2 4E-05 43.4 7.3 76 225-312 1-79 (319)
377 3lf2_A Short chain oxidoreduct 87.2 1.2 4.2E-05 41.4 7.2 35 220-255 4-39 (265)
378 3i1j_A Oxidoreductase, short c 87.0 1 3.4E-05 41.2 6.3 34 221-255 11-45 (247)
379 4aj2_A L-lactate dehydrogenase 87.0 1.7 5.8E-05 42.9 8.4 76 222-309 17-96 (331)
380 2z1n_A Dehydrogenase; reductas 87.0 1.4 4.6E-05 40.9 7.3 35 220-255 3-38 (260)
381 1hyh_A L-hicdh, L-2-hydroxyiso 86.9 0.99 3.4E-05 43.5 6.5 75 225-312 2-81 (309)
382 3kvo_A Hydroxysteroid dehydrog 86.8 0.72 2.5E-05 45.5 5.6 34 221-254 42-76 (346)
383 3t4x_A Oxidoreductase, short c 86.8 0.98 3.4E-05 42.2 6.3 36 219-255 5-41 (267)
384 2hq1_A Glucose/ribitol dehydro 86.8 0.76 2.6E-05 41.9 5.4 36 221-256 2-38 (247)
385 3lyl_A 3-oxoacyl-(acyl-carrier 86.6 1.3 4.3E-05 40.6 6.8 34 221-254 2-36 (247)
386 2ph3_A 3-oxoacyl-[acyl carrier 86.6 0.54 1.8E-05 42.8 4.2 32 224-255 1-33 (245)
387 3ucx_A Short chain dehydrogena 86.6 1.3 4.4E-05 41.3 7.0 35 220-255 7-42 (264)
388 1jvb_A NAD(H)-dependent alcoho 86.5 1.8 6E-05 42.1 8.2 32 223-254 170-203 (347)
389 2cf5_A Atccad5, CAD, cinnamyl 86.5 1.4 4.9E-05 43.1 7.5 41 215-255 172-212 (357)
390 3imf_A Short chain dehydrogena 86.5 0.98 3.4E-05 41.9 6.1 46 221-277 3-49 (257)
391 4iin_A 3-ketoacyl-acyl carrier 86.5 1.2 4.2E-05 41.6 6.8 51 205-255 9-61 (271)
392 3nyw_A Putative oxidoreductase 86.4 1.1 3.8E-05 41.5 6.3 35 220-255 3-38 (250)
393 4ibo_A Gluconate dehydrogenase 86.3 0.96 3.3E-05 42.6 6.0 34 221-255 23-57 (271)
394 3qlj_A Short chain dehydrogena 86.3 0.67 2.3E-05 44.7 5.0 35 221-256 24-59 (322)
395 1zem_A Xylitol dehydrogenase; 86.3 1.5 5.1E-05 40.7 7.2 34 221-255 4-38 (262)
396 4a2c_A Galactitol-1-phosphate 86.1 3.1 0.00011 40.1 9.6 41 214-255 152-192 (346)
397 3pk0_A Short-chain dehydrogena 86.1 1.1 3.6E-05 41.9 6.1 34 221-255 7-41 (262)
398 2ewd_A Lactate dehydrogenase,; 86.1 0.36 1.2E-05 46.9 2.9 32 224-256 4-36 (317)
399 1sny_A Sniffer CG10964-PA; alp 86.0 0.79 2.7E-05 42.4 5.1 34 221-254 18-55 (267)
400 3edm_A Short chain dehydrogena 86.0 1 3.4E-05 42.0 5.9 36 221-256 5-41 (259)
401 2ae2_A Protein (tropinone redu 86.0 1.6 5.3E-05 40.5 7.2 34 221-255 6-40 (260)
402 3ius_A Uncharacterized conserv 86.0 0.67 2.3E-05 43.2 4.6 32 224-255 5-36 (286)
403 2jah_A Clavulanic acid dehydro 86.0 1.6 5.4E-05 40.2 7.2 34 221-255 4-38 (247)
404 3rkr_A Short chain oxidoreduct 85.9 1.2 4.1E-05 41.4 6.3 34 221-255 26-60 (262)
405 1jay_A Coenzyme F420H2:NADP+ o 85.8 1.2 4.2E-05 39.8 6.2 94 225-332 1-99 (212)
406 1zmo_A Halohydrin dehalogenase 85.8 1.3 4.5E-05 40.7 6.5 30 224-253 1-31 (244)
407 4h15_A Short chain alcohol deh 85.8 0.74 2.5E-05 43.7 4.9 35 221-256 8-43 (261)
408 4egf_A L-xylulose reductase; s 85.8 1.1 3.8E-05 41.9 6.1 34 221-255 17-51 (266)
409 3tjr_A Short chain dehydrogena 85.8 1.5 5.1E-05 41.9 7.1 34 221-255 28-62 (301)
410 1ks9_A KPA reductase;, 2-dehyd 85.6 0.88 3E-05 42.5 5.3 31 225-256 1-31 (291)
411 1iy8_A Levodione reductase; ox 85.6 1.6 5.4E-05 40.6 7.0 34 221-255 10-44 (267)
412 2z1m_A GDP-D-mannose dehydrata 85.6 0.76 2.6E-05 43.7 4.9 33 222-254 1-34 (345)
413 2pzm_A Putative nucleotide sug 85.5 0.8 2.7E-05 43.9 5.0 35 221-255 17-52 (330)
414 3pgx_A Carveol dehydrogenase; 85.5 1.7 5.8E-05 40.8 7.2 35 221-256 12-47 (280)
415 2b4q_A Rhamnolipids biosynthes 85.5 1.7 5.9E-05 40.9 7.3 34 221-255 26-60 (276)
416 1vl8_A Gluconate 5-dehydrogena 85.4 1.6 5.6E-05 40.8 7.0 35 220-255 17-52 (267)
417 3vtf_A UDP-glucose 6-dehydroge 85.4 0.98 3.3E-05 46.5 5.8 40 225-275 22-61 (444)
418 4fc7_A Peroxisomal 2,4-dienoyl 85.4 1.5 5.1E-05 41.3 6.7 34 221-255 24-58 (277)
419 2x5o_A UDP-N-acetylmuramoylala 85.3 0.53 1.8E-05 47.9 3.8 36 221-257 2-37 (439)
420 3d3w_A L-xylulose reductase; u 85.3 1.2 4.1E-05 40.5 5.9 35 220-254 3-38 (244)
421 3tox_A Short chain dehydrogena 85.3 1.2 4.3E-05 42.1 6.2 34 221-255 5-39 (280)
422 3gaf_A 7-alpha-hydroxysteroid 85.3 1.2 4E-05 41.4 5.9 35 220-255 8-43 (256)
423 1u7z_A Coenzyme A biosynthesis 85.3 1.2 4E-05 41.8 5.8 35 221-255 5-56 (226)
424 2pnf_A 3-oxoacyl-[acyl-carrier 85.2 0.86 2.9E-05 41.4 4.9 35 220-254 3-38 (248)
425 1uls_A Putative 3-oxoacyl-acyl 85.2 1.9 6.4E-05 39.7 7.2 33 221-253 2-35 (245)
426 3tl2_A Malate dehydrogenase; c 85.2 0.45 1.5E-05 46.7 3.0 33 222-255 6-39 (315)
427 3oig_A Enoyl-[acyl-carrier-pro 85.2 1.1 3.7E-05 41.6 5.6 35 220-254 3-40 (266)
428 3gvi_A Malate dehydrogenase; N 85.2 0.52 1.8E-05 46.5 3.5 34 222-256 5-39 (324)
429 2wsb_A Galactitol dehydrogenas 85.1 1.1 3.8E-05 40.9 5.6 34 221-254 8-42 (254)
430 3ioy_A Short-chain dehydrogena 85.0 1.5 5.1E-05 42.4 6.7 34 221-255 5-39 (319)
431 3fi9_A Malate dehydrogenase; s 85.0 1.2 4.1E-05 44.3 6.1 73 222-309 6-85 (343)
432 1lld_A L-lactate dehydrogenase 85.0 3 0.0001 39.9 8.9 31 224-255 7-39 (319)
433 4dry_A 3-oxoacyl-[acyl-carrier 85.0 1.1 3.7E-05 42.5 5.6 35 220-255 29-64 (281)
434 3awd_A GOX2181, putative polyo 85.0 1.1 3.8E-05 41.1 5.6 34 221-254 10-44 (260)
435 3vps_A TUNA, NAD-dependent epi 85.0 0.76 2.6E-05 43.2 4.5 35 221-255 4-39 (321)
436 3l6e_A Oxidoreductase, short-c 85.0 1.7 5.8E-05 39.8 6.8 33 222-255 1-34 (235)
437 2yv1_A Succinyl-COA ligase [AD 84.9 0.73 2.5E-05 44.7 4.4 106 223-350 12-125 (294)
438 4b4o_A Epimerase family protei 84.9 0.93 3.2E-05 42.7 5.1 31 225-255 1-32 (298)
439 1o5i_A 3-oxoacyl-(acyl carrier 84.8 1.2 4E-05 41.3 5.7 35 221-256 16-51 (249)
440 2i6u_A Otcase, ornithine carba 84.8 3.1 0.0001 40.8 8.8 222 140-389 56-297 (307)
441 3h7a_A Short chain dehydrogena 84.8 1.1 3.9E-05 41.5 5.6 36 220-256 3-39 (252)
442 2cdc_A Glucose dehydrogenase g 84.8 0.8 2.7E-05 45.0 4.7 31 224-254 181-211 (366)
443 1t2d_A LDH-P, L-lactate dehydr 84.8 0.45 1.5E-05 46.7 2.8 31 225-256 5-36 (322)
444 1f8f_A Benzyl alcohol dehydrog 84.8 1.5 5.2E-05 43.0 6.8 32 223-254 190-222 (371)
445 4id9_A Short-chain dehydrogena 84.7 0.75 2.6E-05 44.1 4.4 35 221-255 16-51 (347)
446 3v2g_A 3-oxoacyl-[acyl-carrier 84.7 2.2 7.7E-05 40.0 7.6 36 220-255 27-63 (271)
447 2zat_A Dehydrogenase/reductase 84.6 1.5 5.2E-05 40.5 6.3 34 221-255 11-45 (260)
448 3h2s_A Putative NADH-flavin re 84.5 1.1 3.7E-05 40.0 5.1 31 225-255 1-32 (224)
449 1ae1_A Tropinone reductase-I; 84.5 2 6.8E-05 40.2 7.2 35 220-255 17-52 (273)
450 3ew7_A LMO0794 protein; Q8Y8U8 84.5 1.1 3.7E-05 39.7 5.1 31 225-255 1-32 (221)
451 2a4k_A 3-oxoacyl-[acyl carrier 84.5 1.9 6.7E-05 40.2 7.1 34 221-255 3-37 (263)
452 3nkl_A UDP-D-quinovosamine 4-d 84.4 1.2 4.1E-05 37.3 5.0 34 223-256 3-37 (141)
453 1yb1_A 17-beta-hydroxysteroid 84.4 1.9 6.6E-05 40.2 7.0 35 220-254 27-62 (272)
454 2pd6_A Estradiol 17-beta-dehyd 84.4 1.3 4.5E-05 40.6 5.8 33 221-253 4-37 (264)
455 2qq5_A DHRS1, dehydrogenase/re 84.4 1.6 5.3E-05 40.5 6.3 34 221-255 2-36 (260)
456 1piw_A Hypothetical zinc-type 84.4 2 6.9E-05 42.0 7.4 32 223-254 179-210 (360)
457 3rui_A Ubiquitin-like modifier 84.2 0.82 2.8E-05 45.5 4.5 37 221-257 31-67 (340)
458 2rhc_B Actinorhodin polyketide 84.2 2 6.8E-05 40.4 7.0 34 221-255 19-53 (277)
459 2hjr_A Malate dehydrogenase; m 84.2 0.55 1.9E-05 46.2 3.2 33 223-256 13-46 (328)
460 1d7o_A Enoyl-[acyl-carrier pro 84.1 1.2 4.1E-05 42.1 5.5 34 220-253 4-40 (297)
461 3ged_A Short-chain dehydrogena 84.0 1.8 6E-05 40.9 6.6 45 224-279 2-47 (247)
462 1ja9_A 4HNR, 1,3,6,8-tetrahydr 84.0 1.8 6.1E-05 39.9 6.6 35 221-255 18-53 (274)
463 3ego_A Probable 2-dehydropanto 84.0 1.7 5.9E-05 41.8 6.7 96 225-335 3-104 (307)
464 3dfu_A Uncharacterized protein 83.9 0.36 1.2E-05 45.5 1.6 32 222-253 4-35 (232)
465 3zwc_A Peroxisomal bifunctiona 83.8 3.6 0.00012 45.0 9.7 30 225-255 317-346 (742)
466 1ys4_A Aspartate-semialdehyde 83.7 2.4 8.3E-05 41.9 7.7 31 225-255 9-41 (354)
467 1y6j_A L-lactate dehydrogenase 83.7 2.5 8.5E-05 41.2 7.7 32 224-256 7-40 (318)
468 3tfo_A Putative 3-oxoacyl-(acy 83.7 1.6 5.5E-05 41.0 6.2 33 222-255 2-35 (264)
469 2o23_A HADH2 protein; HSD17B10 83.7 1.4 4.7E-05 40.6 5.6 35 220-254 8-43 (265)
470 3ftp_A 3-oxoacyl-[acyl-carrier 83.6 1.7 5.9E-05 40.8 6.3 35 220-255 24-59 (270)
471 4dup_A Quinone oxidoreductase; 83.6 1.7 5.9E-05 42.4 6.5 32 223-254 167-199 (353)
472 3v8b_A Putative dehydrogenase, 83.6 2 7E-05 40.6 6.9 34 221-255 25-59 (283)
473 2uvd_A 3-oxoacyl-(acyl-carrier 83.6 1.9 6.7E-05 39.5 6.6 34 221-254 1-35 (246)
474 3oz2_A Digeranylgeranylglycero 83.5 0.97 3.3E-05 43.4 4.6 32 225-257 5-36 (397)
475 3ldh_A Lactate dehydrogenase; 83.5 1.9 6.3E-05 42.7 6.7 72 223-309 20-98 (330)
476 3q2o_A Phosphoribosylaminoimid 83.5 3.1 0.0001 41.1 8.4 54 222-276 12-74 (389)
477 3nrc_A Enoyl-[acyl-carrier-pro 83.5 2.4 8.3E-05 39.7 7.3 51 221-280 23-76 (280)
478 1sby_A Alcohol dehydrogenase; 83.4 1.3 4.5E-05 40.7 5.3 35 221-256 2-38 (254)
479 3cxt_A Dehydrogenase with diff 83.4 2.2 7.4E-05 40.6 7.0 34 221-255 31-65 (291)
480 1uuf_A YAHK, zinc-type alcohol 83.4 2.8 9.5E-05 41.4 8.0 39 215-254 187-225 (369)
481 2bgk_A Rhizome secoisolaricire 83.4 1.5 5E-05 40.7 5.7 33 221-253 13-46 (278)
482 2yjz_A Metalloreductase steap4 83.9 0.23 7.7E-06 45.4 0.0 34 222-256 17-50 (201)
483 3uf0_A Short-chain dehydrogena 83.3 1.5 5.1E-05 41.3 5.8 35 220-254 27-62 (273)
484 3p7m_A Malate dehydrogenase; p 83.2 1.3 4.6E-05 43.3 5.6 34 222-256 3-37 (321)
485 3e03_A Short chain dehydrogena 83.2 1.5 5.1E-05 41.1 5.7 35 220-254 2-37 (274)
486 3sxp_A ADP-L-glycero-D-mannohe 83.2 3.4 0.00012 39.9 8.4 36 220-255 6-44 (362)
487 1h5q_A NADP-dependent mannitol 83.2 1.1 3.9E-05 41.0 4.8 34 221-254 11-45 (265)
488 3p19_A BFPVVD8, putative blue 83.2 1.2 4.2E-05 41.7 5.1 36 219-254 11-47 (266)
489 2h6e_A ADH-4, D-arabinose 1-de 83.2 2 7E-05 41.6 6.8 32 223-254 170-203 (344)
490 2fwm_X 2,3-dihydro-2,3-dihydro 83.1 1.5 5.2E-05 40.4 5.7 34 221-254 4-38 (250)
491 3is3_A 17BETA-hydroxysteroid d 83.0 2.3 7.7E-05 39.7 6.8 34 221-254 15-49 (270)
492 1w6u_A 2,4-dienoyl-COA reducta 82.9 1.5 5.1E-05 41.3 5.6 34 221-254 23-57 (302)
493 1xg5_A ARPG836; short chain de 82.7 1.4 4.8E-05 41.2 5.3 34 221-254 29-63 (279)
494 1ur5_A Malate dehydrogenase; o 82.7 2.4 8.2E-05 41.0 7.1 31 225-256 3-34 (309)
495 1xkq_A Short-chain reductase f 82.6 1.8 6.3E-05 40.5 6.1 33 221-253 3-36 (280)
496 1xq6_A Unknown protein; struct 82.6 1.7 5.9E-05 39.1 5.7 33 222-254 2-37 (253)
497 3o26_A Salutaridine reductase; 82.5 1.8 6.2E-05 40.5 6.0 34 221-254 9-43 (311)
498 4hv4_A UDP-N-acetylmuramate--L 82.5 3.5 0.00012 42.6 8.6 34 223-257 21-55 (494)
499 2c29_D Dihydroflavonol 4-reduc 82.5 1 3.5E-05 43.0 4.4 34 222-255 3-37 (337)
500 3c7a_A Octopine dehydrogenase; 82.5 0.97 3.3E-05 45.1 4.3 30 225-255 3-33 (404)
No 1
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=100.00 E-value=1.8e-130 Score=1008.04 Aligned_cols=412 Identities=44% Similarity=0.769 Sum_probs=405.3
Q ss_pred CCCCChHHHHHHHHHhhhcccCCChhHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecCCCCH
Q psy8194 15 QNDLGPWGVYLQQIDRVTPYLGSLSRWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHPDVTL 94 (428)
Q Consensus 15 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p~vt~ 94 (428)
.+..++|++++++|++|+++++++|+++++|++|+|+++|+|||+||||++++|+|||||||+++||+||||||||++|+
T Consensus 12 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~l~~p~r~~~~~vp~~~d~G~~~v~~GyRvqhn~a~GP~kGGiR~~p~v~~ 91 (424)
T 3k92_A 12 KEALNLFLSTQTIIKEALRKLGYPGDMYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGGVRFHPEVNE 91 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCCSSSSEECCEEEETTCCH
T ss_pred cccCCHHHHHHHHHHHHHHHcCCCHHHHHHhcCCCeEEEEEEEEEecCCcEEEEEEEEEEECCcCCCCCCCeEecCCCCH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHh
Q psy8194 95 SEIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTY 174 (428)
Q Consensus 95 ~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y 174 (428)
+|+++||+||||||||++||||||||||++||+.+|+.|+||+||+|+++|.+++||++|||||||||++++|+||+|+|
T Consensus 92 ~ev~~La~~mt~KnAl~~lP~GGgKggi~~DP~~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y 171 (424)
T 3k92_A 92 EKVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEY 171 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 175 STKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 175 ~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 254 (428)
++++|+++++++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||+||
T Consensus 172 ~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavs 251 (424)
T 3k92_A 172 SRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGIS 251 (424)
T ss_dssp HHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHhCCCCcceeecccccCCCcCCCcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEEecccccccccccccccccceEEEecCCCCC
Q psy8194 255 DDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPT 334 (428)
Q Consensus 255 D~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIvegAN~p~ 334 (428)
|++|+||||+|||+++|+++++++|++.+|+ ++.++ ++++|+.+||||+|||++|+||.+||++|+||+|+||||+|+
T Consensus 252 D~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~-a~~~~-~~~i~~~~~DIliPcA~~n~I~~~~a~~l~ak~V~EgAN~p~ 329 (424)
T 3k92_A 252 DANGGLYNPDGLDIPYLLDKRDSFGMVTNLF-TDVIT-NEELLEKDCDILVPAAISNQITAKNAHNIQASIVVERANGPT 329 (424)
T ss_dssp CSSCEEECTTCCCHHHHHHHCCSSSCCGGGC-SCCBC-HHHHHHSCCSEEEECSCSSCBCTTTGGGCCCSEEECCSSSCB
T ss_pred CCCCcEECCCCCCHHHHHHHHHHhCCCCCCC-cEEec-CccceeccccEEeecCcccccChhhHhhcCceEEEcCCCCCC
Confidence 9999999999999999999999999999998 77777 889999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 335 TTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 335 t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+++|.++|++|+++|+++++++|+|||++
T Consensus 330 t~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~l~~~m~~~~~~v~~~a~~~~~~~~~aA~~~ 409 (424)
T 3k92_A 330 TIDATKILNERGVLLVPDILASAGGVTVSYFEWVQNNQGYYWSEEEVAEKLRSVMVSSFETIYQTAATHKVDMRLAAYMT 409 (424)
T ss_dssp CHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEECchHhcCCCEEeehhHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC
Q psy8194 415 GCTRVLQAHKTRGL 428 (428)
Q Consensus 415 a~~rv~~a~~~rG~ 428 (428)
|++||+++|+.|||
T Consensus 410 a~~rva~a~~~~G~ 423 (424)
T 3k92_A 410 GIRKSAEASRFRGW 423 (424)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999996
No 2
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=100.00 E-value=2.3e-126 Score=982.47 Aligned_cols=419 Identities=55% Similarity=0.986 Sum_probs=410.2
Q ss_pred CCCCcCCCCCCChHHHHHHHHHhhhcccCCChhHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCee
Q psy8194 8 SRPSYLSQNDLGPWGVYLQQIDRVTPYLGSLSRWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVR 87 (428)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR 87 (428)
+++++...+ .+||++++++|++|+++++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+|||||
T Consensus 20 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~G~rvqhn~a~GPakGGiR 98 (440)
T 3aog_A 20 EPLSYLGKD-GGPWEIFTEQVDRVVPYLGRLAPLAESLKRPKRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVR 98 (440)
T ss_dssp CCCGGGTTC-CTHHHHHHHHHHHHGGGCGGGGGGGGGGGSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEE
T ss_pred hhhhccCCC-CCHHHHHHHHHHHHHHHhCCCHHHHHHhcCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeE
Confidence 445555555 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHH
Q psy8194 88 FHPDVTLSEIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIM 167 (428)
Q Consensus 88 ~~p~vt~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~m 167 (428)
|||++|++|+++||++|||||||++||||||||||++||+.+|+.|+||+||+|+++|.+++||++||||||+||++++|
T Consensus 99 ~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m 178 (440)
T 3aog_A 99 YHPEVTLSEVMALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREM 178 (440)
T ss_dssp ECTTCCHHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHH
T ss_pred EEecCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCC
Q psy8194 168 SWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAG 247 (428)
Q Consensus 168 a~~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~G 247 (428)
+||+|+|+++.|+++++++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|
T Consensus 179 ~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~G 258 (440)
T 3aog_A 179 AWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHG 258 (440)
T ss_dssp HHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHCC
Confidence 99999999999998899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEEecccccccccccccccccceEEE
Q psy8194 248 AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIIL 327 (428)
Q Consensus 248 akvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIv 327 (428)
+|||+|+|++|++|||+|||+++|++++++++++.+|++++.++ ++++|+.+||||+|||++|+||.+||++|+||+|+
T Consensus 259 akvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~-~~ei~~~~~DIlvPcA~~n~i~~~na~~l~ak~Vv 337 (440)
T 3aog_A 259 ARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLP-AADFWGLPVEFLVPAALEKQITEQNAWRIRARIVA 337 (440)
T ss_dssp CEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECC-HHHHTTCCCSEEEECSSSSCBCTTTGGGCCCSEEE
T ss_pred CEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcC-chhhhcCCCcEEEecCCcCccchhhHHHcCCcEEE
Confidence 99999999999999999999999999999999999999888887 78899999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Q psy8194 328 EGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVSL 407 (428)
Q Consensus 328 egAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~ 407 (428)
||||+|+||+|+++|++|||+|+||+++|+|||++|||||+||+++.+|++|+|.++|+++|.+++++++++|+++++++
T Consensus 338 EgAN~p~t~eA~~iL~~~GI~~~PD~~aNaGGV~vS~~E~~qN~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~~~~~~ 417 (440)
T 3aog_A 338 EGANGPTTPAADDILLEKGVLVVPDVIANAGGVTVSYFEWVQDFNSYFWTEEEINARLERVLRNAFEAVWQVAQEKKIPL 417 (440)
T ss_dssp CCSSSCBCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred ecCccccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCC
Q psy8194 408 RTAAFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 408 r~aA~~~a~~rv~~a~~~rG~ 428 (428)
|+|||++|++||+++|+.|||
T Consensus 418 ~~aA~~~a~~rva~a~~~~G~ 438 (440)
T 3aog_A 418 RTAAYVVAATRVLEARALRGL 438 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999996
No 3
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-125 Score=973.63 Aligned_cols=413 Identities=36% Similarity=0.693 Sum_probs=405.0
Q ss_pred CcCCCCCCChHHHHHHHHHhhhcccCCChhHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecC
Q psy8194 11 SYLSQNDLGPWGVYLQQIDRVTPYLGSLSRWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHP 90 (428)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p 90 (428)
++...++.+||++++++|++|+++++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~hn~~~GPakGGiR~~p 84 (419)
T 3aoe_E 5 AYRPPEDPGLWDTYLEWLERALKVAGVHPTTLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVVHDIARGPAKGGVRLDP 84 (419)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHTTSCCCHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECT
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhCCCHHHHhhcCCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEecC
Confidence 46667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHH
Q psy8194 91 DVTLSEIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWM 170 (428)
Q Consensus 91 ~vt~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~ 170 (428)
++|++|+++||++|||||||++||||||||||++||+.+|+.|+||+||+|+++|.+++||++||||||+||++++|+||
T Consensus 85 ~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~ 164 (419)
T 3aoe_E 85 GVTLGQTAGLAAWMTLKAAVYDLPFGGAAGGIAVDPKGLSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWI 164 (419)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhccCCCCCccEEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEE
Q psy8194 171 MDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKI 250 (428)
Q Consensus 171 ~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Gakv 250 (428)
+|+|+++.|+++++++||||..+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+||
T Consensus 165 ~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakV 244 (419)
T 3aoe_E 165 MDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERLGMRV 244 (419)
T ss_dssp HHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEE
Confidence 99999999998899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEEecccccccccccccccccceEEEecC
Q psy8194 251 VAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGA 330 (428)
Q Consensus 251 VaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIvegA 330 (428)
|+|||++|++|||+|||+++|++++++++++.+| .++ ++++|+.+||||+|||++|+||.+||++++||+|+|||
T Consensus 245 VavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~----~~~-~~e~~~~~~DVliP~A~~n~i~~~~A~~l~ak~V~EgA 319 (419)
T 3aoe_E 245 VAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRL----DLA-PEEVFGLEAEVLVLAAREGALDGDRARQVQAQAVVEVA 319 (419)
T ss_dssp EEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCC----CBC-TTTGGGSSCSEEEECSCTTCBCHHHHTTCCCSEEEECS
T ss_pred EEEEcCCCeEECCCCCCHHHHHHHHHhhCCccee----ecc-chhhhccCceEEEecccccccccchHhhCCceEEEECC
Confidence 9999999999999999999999999999999887 445 78899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Q psy8194 331 NGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVSLRTA 410 (428)
Q Consensus 331 N~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~a 410 (428)
|+|+||+|+++|++|||+|+||+++|||||++|||||+||+++..|++|+|+++|+++|.+++++|+++|+++++++|+|
T Consensus 320 N~p~t~~A~~~L~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~~~~~~~~a 399 (419)
T 3aoe_E 320 NFGLNPEAEAYLLGKGALVVPDLLSGGGGLLASYLEWVQDLNMFFWSPEEVRERFETRVARVVDAVCRRAERGGLDLRMG 399 (419)
T ss_dssp TTCBCHHHHHHHHHHTCEEECHHHHTCHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred CCcCCHHHHHHHHHCCCEEECHHHHhCCCchhhHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCC
Q psy8194 411 AFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 411 A~~~a~~rv~~a~~~rG~ 428 (428)
||++|++||+++|+.|||
T Consensus 400 A~~~a~~rv~~a~~~~G~ 417 (419)
T 3aoe_E 400 ALALALERLDEATRLRGV 417 (419)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 999999999999999996
No 4
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=100.00 E-value=2.4e-126 Score=981.18 Aligned_cols=413 Identities=32% Similarity=0.527 Sum_probs=398.5
Q ss_pred CCCCCChHHHHHHHHHhhhcccCCChhH---HhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecC
Q psy8194 14 SQNDLGPWGVYLQQIDRVTPYLGSLSRW---IEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHP 90 (428)
Q Consensus 14 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p 90 (428)
.+.+.+|+|++.++|++++++|+++|++ +++|++|+|+++|+|||+||||++++|+|||||||+++||+||||||||
T Consensus 27 ~~~~~ef~qa~~e~~~~~~~~~~~~p~~~~~~~~l~~P~r~i~~~vp~~~D~G~~~v~~GyRvqhn~a~GPakGGiR~~p 106 (456)
T 3r3j_A 27 NKNEPEFLQAFEEVLSCLKPVFKKDNVYIGVLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQYNSVLGPYKGGLRFHP 106 (456)
T ss_dssp TTTCHHHHHHHHHHHHHTHHHHHHCTHHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhhChHhhHHHHhccCCceEEEEEEEEEeCCCcEEEEEEEEEEECCcCCCccCceEecC
Confidence 4556789999999999999999999985 9999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHH
Q psy8194 91 DVTLSEIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWM 170 (428)
Q Consensus 91 ~vt~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~ 170 (428)
++|++|+++||+||||||||++||||||||||++||+++|+.|+||++|+|+++|.++|||+.|||||||||++++|+||
T Consensus 107 ~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~ 186 (456)
T 3r3j_A 107 AVNLSVIKFLGFEQIFKNSLTTLPMGGGKGGSDFDPKGKSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYL 186 (456)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTSSCCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCCcceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEE
Q psy8194 171 MDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKI 250 (428)
Q Consensus 171 ~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Gakv 250 (428)
+|+|+++.+. .++++||||..+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+||
T Consensus 187 ~~~y~~~~~~-~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~Gakv 265 (456)
T 3r3j_A 187 FGQYKKLKNS-FEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIV 265 (456)
T ss_dssp HHHHHHHHTS-CCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCB
T ss_pred HHHHHhhcCc-ccceecCCcccccCCCCCCcccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCEE
Confidence 9999999865 489999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCeeeCCCCCCHHHHHHH---HHhc-CCCcCC----CCceeccCCCcccccCceEEecccccccccccccccc-
Q psy8194 251 VAIQDDKTTIYNPNGFNIPKLQKY---VTFT-RSIKDF----NEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNV- 321 (428)
Q Consensus 251 VaVsD~~G~i~n~~GlD~~~l~~~---~~~~-g~l~~~----~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l- 321 (428)
|+|||++|+||||+|||+++|.++ ++++ +++.+| |+++.++ ++++|+++||||+|||++|+||.+||++|
T Consensus 266 VavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~-~~~i~~~~~DI~iPcA~~~~I~~~na~~l~ 344 (456)
T 3r3j_A 266 LTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFE-NQKPWNIPCDIAFPCATQNEINENDADLFI 344 (456)
T ss_dssp CCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEEC-SCCGGGSCCSEEEECSCTTCBCHHHHHHHH
T ss_pred EEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeC-CccccccCccEEEeCCCccchhhHHHHHHH
Confidence 999999999999999999999865 4443 456665 7888888 89999999999999999999999999999
Q ss_pred --cceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy8194 322 --TAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWEL 399 (428)
Q Consensus 322 --~akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~ 399 (428)
+||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||.++++|++|+|+++|+++|.++|++++++
T Consensus 345 ~~~ak~V~EgAN~p~T~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~L~~im~~~~~~~~~~ 424 (456)
T 3r3j_A 345 QNKCKMIVEGANMPTHIKALHKLKQNNIILCPSKAANAGGVAVSGLEMSQNSMRLQWTHQETDMKLQNIMKSIYEQCHNT 424 (456)
T ss_dssp HHTCCEEECCSSSCBCTTHHHHHHTTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEecCCCCCCHHHHHHHHHCCCEEeChHHhcCCceeeehHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCC--CHHHHHHHHHHHHHHHHHHHcCC
Q psy8194 400 ANTKKV--SLRTAAFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 400 a~~~~~--~~r~aA~~~a~~rv~~a~~~rG~ 428 (428)
|+++++ ++|+|||++|++||++||+.||+
T Consensus 425 a~~~~~~~~~r~aA~i~~~~rva~a~~~~G~ 455 (456)
T 3r3j_A 425 SKIYLNESDLVAGANIAGFLKVADSFLEQGG 455 (456)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhCCCCCHHHhccHHHHHHHHHHHHhcCC
Confidence 999998 99999999999999999999996
No 5
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=5.9e-125 Score=977.97 Aligned_cols=412 Identities=38% Similarity=0.624 Sum_probs=395.0
Q ss_pred CCCCChHHHHHHHHHhhhcccCCC------------------hhHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEec
Q psy8194 15 QNDLGPWGVYLQQIDRVTPYLGSL------------------SRWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHN 76 (428)
Q Consensus 15 ~~~~~~~~~~~~~~~~a~~~~~~~------------------~~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~ 76 (428)
..+.+|++++..+|++|+.+++.. +.++++|++|+|+++|+|||+||||++++|+|||||||
T Consensus 4 ~~~~~f~~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~vp~~~D~G~~~v~~GyRvqhn 83 (501)
T 3mw9_A 4 EDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHS 83 (501)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHCCCTTCSSHHHHHHHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhhhHHHHHHHhCCCeEEEEEEEEEeCCCCEEEeeeEEEEEC
Confidence 457799999999999999998842 77999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeecCCCCHHHHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHh--cccCCCCc
Q psy8194 77 ILRGPGKGGVRFHPDVTLSEIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEIS--SIIGLNKD 154 (428)
Q Consensus 77 ~~~GPakGGiR~~p~vt~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~--~~iG~~~d 154 (428)
+++||+||||||||++|++|+++||+||||||||++||||||||||++||+.+|+.|+||+||+|+++|. ++|||++|
T Consensus 84 ~a~GP~kGGiR~hp~v~l~ev~~La~~MT~KnAl~~LP~GGgKGgi~~DPk~~s~~El~r~~r~f~~eL~~~~~IGp~~d 163 (501)
T 3mw9_A 84 QHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVD 163 (501)
T ss_dssp CSSSSEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHTTSCBTTTE
T ss_pred CCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCccCCHHHHHHHHHHHHHHHhhccCCCCCee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 49999999
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhhcCCc---CCceeecccccCCCcCCCCChhHHHHHHHHHHHH------HHhCC--CCC
Q psy8194 155 IPAPDVGTDMQIMSWMMDTYSTKKNYT---IPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIA------SKINL--NII 223 (428)
Q Consensus 155 ipapDvgt~~~~ma~~~d~y~~~~g~~---~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~------~~~g~--~l~ 223 (428)
||||||||++++|+||+|+|+++.|.. +++++||||+.+|||++|.++|||||++++++++ +++|+ +++
T Consensus 164 ipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~ 243 (501)
T 3mw9_A 164 VPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFG 243 (501)
T ss_dssp ECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSST
T ss_pred EecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcC
Confidence 999999999999999999999999975 4789999999999999999999999999999754 56786 589
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
|+||+||||||||+++|++|++.|+|||+|||++|+||||+|||+++|.++++++|++.+||+++.++ . ++|+.+|||
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~-~il~~~~DI 321 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-G-SILEVDCDI 321 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-S-CGGGSCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-c-ccccccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999998886 4 799999999
Q ss_pred EecccccccccccccccccceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCC--------
Q psy8194 304 LIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLL-------- 375 (428)
Q Consensus 304 liPaA~~~~It~~na~~l~akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~-------- 375 (428)
|+|||++|+||.+||++|+||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++
T Consensus 322 liPcA~~n~I~~~na~~l~akiV~EgAN~p~T~eA~~iL~~rGIl~~PD~~aNAGGV~vSy~E~~qn~~~~~~grl~~~~ 401 (501)
T 3mw9_A 322 LIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKY 401 (501)
T ss_dssp EEECSSSCCBCTTTGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCSCTTTTTHHH
T ss_pred EeeccccCccCHhHHHHcCceEEEeCCCCcCCHHHHHHHHHCCCEEEChHHhcCchHHhhHHHHHhccccccccccchhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred ------CCHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHhcC--CCHHHHH
Q psy8194 376 ------WTEQEINLRLNNI------------------------------------ICNAFDAIWELANTKK--VSLRTAA 411 (428)
Q Consensus 376 ------w~~e~v~~~l~~~------------------------------------m~~~~~~v~~~a~~~~--~~~r~aA 411 (428)
|++++|+++|+.+ |.+++++|+++|++++ +++|+||
T Consensus 402 e~~~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~ga~e~d~v~sgL~~~m~~a~~~v~~~a~~~~~~~~lRtAA 481 (501)
T 3mw9_A 402 ERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAA 481 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTCCCCCCCCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred hcccccccHHHHHHHHHhhhcccccccccCchHHHHHHHcCCcHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 9999988888775 9999999999999998 6999999
Q ss_pred HHHHHHHHHHHHHHcCC
Q psy8194 412 FIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 412 ~~~a~~rv~~a~~~rG~ 428 (428)
|++|++||+++|+.||+
T Consensus 482 y~~ai~rv~~a~~~~G~ 498 (501)
T 3mw9_A 482 YVNAIEKVFRVYNEAGV 498 (501)
T ss_dssp HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCc
Confidence 99999999999999996
No 6
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=100.00 E-value=2.4e-125 Score=973.05 Aligned_cols=412 Identities=39% Similarity=0.709 Sum_probs=384.5
Q ss_pred CCCChHHHHHHHHHhhhcccCCChhHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecCCCCHH
Q psy8194 16 NDLGPWGVYLQQIDRVTPYLGSLSRWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHPDVTLS 95 (428)
Q Consensus 16 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p~vt~~ 95 (428)
...+||++++++|++|+++++++|+++++|++|+|+++|++||+||||++++|+|||||||+++||+||||||||++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~~p~~~d~G~~~~~~g~rv~hn~~~GP~kGGiR~~p~v~~~ 82 (421)
T 2yfq_A 3 DTLNPLVAAQEKVRIACEKLGCDPAVYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMD 82 (421)
T ss_dssp ---CHHHHHHHHHHHHHHHHTCCHHHHHHHSSCSEEEEEEEEEEETTTEEEEEEEEEEECCCSSSSEEEEEEEESSCCHH
T ss_pred CccCHHHHHHHHHHHHHHHhCCCHHHHhhccCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCCHH
Confidence 44579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhh
Q psy8194 96 EIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYS 175 (428)
Q Consensus 96 ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~ 175 (428)
|+++||++|||||||++||||||||||++||+.+|+.|+||++|+|+++|.+++||++||||||+||++++|+||+|+|+
T Consensus 83 ev~~La~~mt~KnAl~~lP~GGgKggi~~dP~~~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~ 162 (421)
T 2yfq_A 83 EVKALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYV 162 (421)
T ss_dssp HHHHHHHHHHHHHHHHTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCc-CCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 176 TKKNYT-IPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 176 ~~~g~~-~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 254 (428)
++.|++ +++++||||..+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||+|+
T Consensus 163 ~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavs 242 (421)
T 2yfq_A 163 KLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIA 242 (421)
T ss_dssp HHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECC
T ss_pred HhhCCCCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 999987 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC-----CeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEEecccccccccccccccccceEEEec
Q psy8194 255 DDK-----TTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEG 329 (428)
Q Consensus 255 D~~-----G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIveg 329 (428)
|++ |++|||+|||+++|.+++++++++.+|++++.++ ++++|+++||||+|||++|+||.+||++++||+|+||
T Consensus 243 D~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~-~~~~~~~~~DIliP~A~~n~i~~~~A~~l~ak~VvEg 321 (421)
T 2yfq_A 243 EWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERIT-DEEFWTKEYDIIVPAALENVITGERAKTINAKLVCEA 321 (421)
T ss_dssp BCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC----------------------CEEECSCSSCSCHHHHTTCCCSEEECC
T ss_pred ecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeC-ccchhcCCccEEEEcCCcCcCCcccHHHcCCeEEEeC
Confidence 999 9999999999999999999999999999888887 8899999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Q psy8194 330 ANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVSLRT 409 (428)
Q Consensus 330 AN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~ 409 (428)
||+|+||+|+++|++|||+|+||+++|+|||++|||||+||.++.+|++|+|.++|+++|.++|+++++.|+++++++|+
T Consensus 322 AN~P~t~ea~~il~~~GI~~~Pd~~aNaGGV~vS~~E~~qN~~~~~w~~e~V~~~l~~~m~~~~~~v~~~A~~~g~~~~~ 401 (421)
T 2yfq_A 322 ANGPTTPEGDKVLTERGINLTPDILTNSGGVLVSYYEWVQNQYGYYWTEAEVEEKQEADMMKAIKGVFAVADEYNVTLRE 401 (421)
T ss_dssp SSSCSCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CccccCHHHHHHHHHCCCEEEChHHHhCCCeEEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q psy8194 410 AAFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 410 aA~~~a~~rv~~a~~~rG~ 428 (428)
|||++|++||+++|+.|||
T Consensus 402 aA~~~a~~rv~~a~~~~G~ 420 (421)
T 2yfq_A 402 AVYMYAIKSIDVAMKLRGW 420 (421)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999996
No 7
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=100.00 E-value=5.7e-123 Score=953.21 Aligned_cols=411 Identities=45% Similarity=0.824 Sum_probs=402.7
Q ss_pred CCChHHHHHHHHHhhhcccCCChhHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecCCCCHHH
Q psy8194 17 DLGPWGVYLQQIDRVTPYLGSLSRWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHPDVTLSE 96 (428)
Q Consensus 17 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p~vt~~e 96 (428)
+.+||++++++|++|+++++++|++++.|++|+|++.|++||+||||++++|+|||||||+++||+||||||||+++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~~~~~~GpakGGiR~~p~v~~~e 81 (415)
T 2tmg_A 2 EKSLYEMAVEQFNRAASLMDLESDLAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDE 81 (415)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCHHHHHHHHSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEEESSCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHHHHHhcCCCCeEEEEEEEEEecCCcEEEEEEEEEEECCCCCCCCCcEEeeCCCCHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhh
Q psy8194 97 IIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYST 176 (428)
Q Consensus 97 v~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~ 176 (428)
+++||++|||||||++||||||||||++||+.+|+.|+||++|+|+++|.+++||++||||||+||++++|+||+|+|++
T Consensus 82 v~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~ 161 (415)
T 2tmg_A 82 VKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEM 161 (415)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHH-CCCEEEEEEc
Q psy8194 177 KKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQD 255 (428)
Q Consensus 177 ~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD 255 (428)
++|+.+++++||||..+|||.+|.++|||||+++++++++++|.+++|+||+||||||||++++++|++ +|+|||+|+|
T Consensus 162 ~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD 241 (415)
T 2tmg_A 162 NVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSD 241 (415)
T ss_dssp HHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEe
Confidence 999988999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEEecccccccccccccccccceEEEecCCCCCC
Q psy8194 256 DKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 335 (428)
Q Consensus 256 ~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIvegAN~p~t 335 (428)
++|++|||+|||+++|++++++++++.+|++++.++ ++++|+.+||||+|||++|+||++||++++||+|+||||+|+|
T Consensus 242 ~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~-~~eil~~~~DIliP~A~~n~i~~~~a~~l~ak~V~EgAN~p~t 320 (415)
T 2tmg_A 242 SRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERIT-NEELLELDVDILVPAALEGAIHAGNAERIKAKAVVEGANGPTT 320 (415)
T ss_dssp SSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEEC-HHHHTTCSCSEEEECSSTTSBCHHHHTTCCCSEEECCSSSCBC
T ss_pred CCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcC-chhhhcCCCcEEEecCCcCccCcccHHHcCCeEEEeCCCcccC
Confidence 999999999999999999999999999999888887 8889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy8194 336 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVSLRTAAFIIG 415 (428)
Q Consensus 336 ~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~a 415 (428)
|+|+++|++|||+|+||+++|+|||++|||||+||+++.+|++|+|+++|+++|.++|++++++|+++++++|+|||++|
T Consensus 321 ~~a~~~l~~~Gi~~~PD~~aNaGGV~~s~~E~vqN~~~~~w~~e~v~~~l~~~m~~~~~~v~~~A~~~g~~~~~aA~~~a 400 (415)
T 2tmg_A 321 PEADEILSRRGILVVPDILANAGGVTVSYFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKYNVDMRTAAYILA 400 (415)
T ss_dssp HHHHHHHHHTTCEEECHHHHTCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC
Q psy8194 416 CTRVLQAHKTRGL 428 (428)
Q Consensus 416 ~~rv~~a~~~rG~ 428 (428)
++||+++|+.|||
T Consensus 401 ~~rv~~a~~~~G~ 413 (415)
T 2tmg_A 401 IDRVAYATKKRGI 413 (415)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999996
No 8
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-123 Score=965.56 Aligned_cols=412 Identities=29% Similarity=0.461 Sum_probs=399.1
Q ss_pred CCCCChHHHHHHHHHhhhcccCCCh---hHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecCC
Q psy8194 15 QNDLGPWGVYLQQIDRVTPYLGSLS---RWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHPD 91 (428)
Q Consensus 15 ~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p~ 91 (428)
+.+..|+|+++++|++++++++++| +++++|++|+|+++|+|||+||+|++++|+|||||||+++||+||||||||+
T Consensus 41 ~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~le~l~~Per~i~~~vp~~~D~G~v~v~~Gyrvqhn~a~GPakGGiR~hp~ 120 (470)
T 2bma_A 41 PNQVEFLQAFHEILYSLKPLFMEEPKYLPIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQYNSALGPYKGGLRFHPS 120 (470)
T ss_dssp TTCHHHHHHHHHHHHHTHHHHHHCTTHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECTT
T ss_pred CCCchHHHHHHHHHHHHHHHhccChhhhHHHHHhcCCceEEEEEEEEEeCCCCEEEEEEEEEEECCCCCCCCCCeEeeCC
Confidence 5577899999999999999999999 7999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHH
Q psy8194 92 VTLSEIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMM 171 (428)
Q Consensus 92 vt~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~ 171 (428)
++++|+++||++|||||||++||||||||||++||+.+|+.|+||++|+|+++|.++|||+.||||||+||++++|+||+
T Consensus 121 v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~ 200 (470)
T 2bma_A 121 VNLSIVKFLGFEQIFKNSLTGLSMGGGKGGSDFDPKGKSDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLY 200 (470)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCcCCHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEE
Q psy8194 172 DTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIV 251 (428)
Q Consensus 172 d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvV 251 (428)
++|+++.++. .+++||||..+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|||
T Consensus 201 ~~y~~~~~~~-~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvV 279 (470)
T 2bma_A 201 GQYKKIVNSF-NGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVL 279 (470)
T ss_dssp HHHHHHHCCC-SCSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHhcCCc-ccEEeCCCccCCCCCCccccchHHHHHHHHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEE
Confidence 9999999986 499999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCeeeCCCCC---CHHHHHHHHHhc-CCCcCCC----CceeccCCCcccccCceEEecccccccccccccccc--
Q psy8194 252 AIQDDKTTIYNPNGF---NIPKLQKYVTFT-RSIKDFN----EGEKINDSKEFWSIPCDILIPAAIEDQITINNANNV-- 321 (428)
Q Consensus 252 aVsD~~G~i~n~~Gl---D~~~l~~~~~~~-g~l~~~~----~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l-- 321 (428)
+|||++|+||||+|| |+++|+++++++ +++.+|+ +++.++ ++++|+++||||+|||++|+||.+||++|
T Consensus 280 avsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~-~~~~~~~~~DI~iPcA~~~~I~~~na~~l~~ 358 (470)
T 2bma_A 280 TLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFP-NEKPWGVPCTLAFPCATQNDVDLDQAKLLQK 358 (470)
T ss_dssp EEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECS-SCCTTSSCCSEEEECSSTTCBCSHHHHHHHH
T ss_pred EEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEec-CcCeeecCccEEEeccccCcCCHHHHHHHHh
Confidence 999999999999999 566677777765 7888884 678887 78899999999999999999999999999
Q ss_pred -cceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy8194 322 -TAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELA 400 (428)
Q Consensus 322 -~akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a 400 (428)
+||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++.+|++|+|+++|+++|.++|+++++.|
T Consensus 359 ~~ak~V~EgAN~p~T~eA~~~L~~rGIl~~PD~~aNAGGV~~S~~E~~qn~~~~~w~~eev~~~L~~im~~~~~~~~~~a 438 (470)
T 2bma_A 359 NGCILVGEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLEMSQNFQFSHWTRETVDEKLKEIMRNIFIACSENA 438 (470)
T ss_dssp TTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEeCCCCCCCHHHHHHHHHCCcEEEChHHhhCCCceeeHHHhhccccccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCC---CHHHHHHHHHHHHHHHHHHHcCC
Q psy8194 401 NTKKV---SLRTAAFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 401 ~~~~~---~~r~aA~~~a~~rv~~a~~~rG~ 428 (428)
+++++ ++|+|||++|+.||++||..|||
T Consensus 439 ~~~~~~~~~~r~~A~i~~~~rva~am~~~G~ 469 (470)
T 2bma_A 439 LKYTKNKYDLQAGANIAGFLKVAESYIEQGC 469 (470)
T ss_dssp HHHHSCSSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999 99999999999999999999996
No 9
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=6.4e-124 Score=961.09 Aligned_cols=411 Identities=42% Similarity=0.708 Sum_probs=403.0
Q ss_pred CCChHHHHHHHHHhhhcccCCChhHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecCCCCHHH
Q psy8194 17 DLGPWGVYLQQIDRVTPYLGSLSRWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHPDVTLSE 96 (428)
Q Consensus 17 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p~vt~~e 96 (428)
..|||+++++++++++++|+++|++++.|++|+|++.|++||+||||++++|+|||||||+++||+||||||||+++++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~r~i~v~~p~~~D~G~~~~~~G~rv~~~~~~GpakGG~R~~p~v~~~e 82 (421)
T 1v9l_A 3 RTGFLEYVLNYVKKGVELGGFPEDFYKILSRPRRVLIVNIPVRLDGGGFEVFEGYRVQHCDVLGPYKGGVRFHPEVTLAD 82 (421)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHSCSEEEEEEEEEECSSSCEEEEEEEEEEEECSSSSEEEEEECCTTCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHHHHHhccCCceEEEEEEEEEecCCcEEEEEEEEeecCCcCCCccccEEecCCCCHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhh
Q psy8194 97 IIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYST 176 (428)
Q Consensus 97 v~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~ 176 (428)
+++||++|||||||++||||||||||++||+.+|+.|+||++|+|+++|.+++||++||||||+||++++|+||+++|++
T Consensus 83 v~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~~~~m~~~~~~y~~ 162 (421)
T 1v9l_A 83 DVALAILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWMVDEYSK 162 (421)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEEECSCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 177 KKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 177 ~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+.|+.+++++||||..+|||.+|.++|||||+++++++++++|.+++|+||+||||||||++++++|++.|+|||+|+|+
T Consensus 163 ~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 163 IKGYNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp HHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HhCCCCCCeEeccchhhCCCCCcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 99998899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeCCCCCCHHHHHHHHHhcCC--CcCCCCc---eec-cCCCcccccCceEEecccccccccccccccccceEEEecC
Q psy8194 257 KTTIYNPNGFNIPKLQKYVTFTRS--IKDFNEG---EKI-NDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGA 330 (428)
Q Consensus 257 ~G~i~n~~GlD~~~l~~~~~~~g~--l~~~~~~---~~i-~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIvegA 330 (428)
+|++|||+|||+++|.++++++++ +.+|+++ +.+ + ++++|+.+||||+|||++|+||.+||++|+||+|+|||
T Consensus 243 ~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~-~~~~~~~~~Dil~P~A~~~~I~~~~a~~l~ak~V~EgA 321 (421)
T 1v9l_A 243 NGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKN-PDAIFKLDVDIFVPAAIENVIRGDNAGLVKARLVVEGA 321 (421)
T ss_dssp SCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSS-TTGGGGCCCSEEEECSCSSCBCTTTTTTCCCSEEECCS
T ss_pred CcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCC-chhhhcCCccEEEecCcCCccchhhHHHcCceEEEecC
Confidence 999999999999999999998888 8888766 677 6 88999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHH
Q psy8194 331 NGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELAN-TKKVSLRT 409 (428)
Q Consensus 331 N~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~-~~~~~~r~ 409 (428)
|+|+||+|+++|++|||+|+||+++|||||++|||||+||+++.+|++|+|+++|+++|.+++++|+++|+ ++++++|+
T Consensus 322 N~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~e~v~~~l~~im~~~~~~v~~~a~~~~~~~~~~ 401 (421)
T 1v9l_A 322 NGPTTPEAERILYERGVVVVPDILANAGGVIMSYLEWVENLQWYIWDEEETRKRLENIMVNNVERVYKRWQREKGWTMRD 401 (421)
T ss_dssp SSCBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCHHH
T ss_pred CCcCCHHHHHHHHHCCCEEeChHHhhCCCeeeeHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q psy8194 410 AAFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 410 aA~~~a~~rv~~a~~~rG~ 428 (428)
|||++|++||+++|+.|||
T Consensus 402 aA~~~a~~rv~~a~~~~G~ 420 (421)
T 1v9l_A 402 AAIVTALERIYNAMKIRGW 420 (421)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999996
No 10
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=100.00 E-value=2.2e-122 Score=952.42 Aligned_cols=412 Identities=29% Similarity=0.489 Sum_probs=393.4
Q ss_pred CCCCChHHHHHHHHHhhhcccCCChh-----HHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeec
Q psy8194 15 QNDLGPWGVYLQQIDRVTPYLGSLSR-----WIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFH 89 (428)
Q Consensus 15 ~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~ 89 (428)
+.+..|+|.+.+.++...++++.+|+ ++|+|.+|+|+|+|+|||+||||++++|+|||||||+++||+|||||||
T Consensus 22 ~~~~ef~qa~~e~~~~l~~~~~~~p~y~~~~~~e~l~~PeR~i~~~vp~~~D~G~~~v~~GyRvqhn~alGP~kGG~Rfh 101 (450)
T 4fcc_A 22 PNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFH 101 (450)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCGGGTSTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEEC
T ss_pred cCChHHHHHHHHHHHHHHHHHHhChhhhhhhHHHHHhCCceEEEEEEEEEECCCcEEEEEEEEEEECCCCCCCCCceEec
Confidence 34556999999999999999998886 6899999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHH
Q psy8194 90 PDVTLSEIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSW 169 (428)
Q Consensus 90 p~vt~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~ 169 (428)
|++|++|+++||++|||||||++||||||||||++||+.+|+.|+||++|+|+++|.++|||+.|||+||+||++++|+|
T Consensus 102 p~v~l~ev~~La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~ 181 (450)
T 4fcc_A 102 PSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGF 181 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCE
Q psy8194 170 MMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAK 249 (428)
Q Consensus 170 ~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Gak 249 (428)
|+++|+++.+.. ++++||||+.+|||.+|.++|||||++++++++++++.+++|+||+||||||||+++|++|++.|+|
T Consensus 182 ~~~~y~~~~~~~-~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~Gak 260 (450)
T 4fcc_A 182 MAGMMKKLSNNT-ACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGAR 260 (450)
T ss_dssp HHHHHHHHHTCC-SCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred hhhhhhhccCCC-ceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCe
Confidence 999999998764 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCeeeCCCCCCHHHHHHHHHhc----CCCcCCC---CceeccCCCcccccCceEEeccccccccccccccccc
Q psy8194 250 IVAIQDDKTTIYNPNGFNIPKLQKYVTFT----RSIKDFN---EGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVT 322 (428)
Q Consensus 250 vVaVsD~~G~i~n~~GlD~~~l~~~~~~~----g~l~~~~---~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~ 322 (428)
||+|+|++|+||||+|||+++|.++++.+ +++.+|+ +++.++ ++++|+.+||||+|||++|+||.+||++|+
T Consensus 261 vVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~-~~~i~~~~~DI~iPcAl~~~I~~~~a~~L~ 339 (450)
T 4fcc_A 261 VITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE-GQQPWSVPVDIALPCATQNELDVDAAHQLI 339 (450)
T ss_dssp EEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE-TCCGGGSCCSEEEECSCTTCBCHHHHHHHH
T ss_pred EEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec-CcccccCCccEEeeccccccccHHHHHHHH
Confidence 99999999999999999999999887633 4444443 567788 899999999999999999999999999997
Q ss_pred ---ceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy8194 323 ---AKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWEL 399 (428)
Q Consensus 323 ---akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~ 399 (428)
||+|+||||+|+||||+++|++|||+|+||+++||||||+|||||+||+++++|++|+|+++|+++|.++|++++++
T Consensus 340 a~g~k~IaEgAN~p~t~eA~~iL~~rGIl~~PD~~aNAGGVi~S~~E~~qn~~~~~w~~eeV~~kL~~im~~~~~~~~~~ 419 (450)
T 4fcc_A 340 ANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHACVEH 419 (450)
T ss_dssp HTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCceEEecCCCCCCCHHHHHHHHHCCCEEEChHHhcCccHhhhHHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh-cCCCHHHHHHHHHHHHHHHHHHHcCC
Q psy8194 400 ANT-KKVSLRTAAFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 400 a~~-~~~~~r~aA~~~a~~rv~~a~~~rG~ 428 (428)
+++ +.+++|+|||++|++||++||+.|||
T Consensus 420 ~~e~~~~~~~~aA~i~a~~rVa~Am~~~G~ 449 (450)
T 4fcc_A 420 GGEGEQTNYVQGANIAGFVKVADAMLAQGV 449 (450)
T ss_dssp SCSSSSCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 876 56899999999999999999999996
No 11
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=100.00 E-value=3.9e-120 Score=938.01 Aligned_cols=413 Identities=30% Similarity=0.495 Sum_probs=402.1
Q ss_pred CCCCChHHHHHHHHHhhhcccCCChh-----HHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeec
Q psy8194 15 QNDLGPWGVYLQQIDRVTPYLGSLSR-----WIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFH 89 (428)
Q Consensus 15 ~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~ 89 (428)
+.+.+|+|+++++|++++++++++|+ ++++|++|+|+++|++||+||+|++++|+|||||||+++||+|||||||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Per~i~~~vp~~~d~G~~~v~~G~rv~hn~~~GPakGGlR~~ 95 (449)
T 1bgv_A 16 ADEPEFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYKGGLRFA 95 (449)
T ss_dssp TTCHHHHHHHHHHHHTTHHHHHTCHHHHHTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEEC
T ss_pred CCCccHHHHHHHHHHHHHHHhccChhhhhhhHHHHhcCCceEEEEEEEEEeCCCCEEEEeEEEEEEcCCcCCCCCCeeec
Confidence 45678999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHH
Q psy8194 90 PDVTLSEIIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSW 169 (428)
Q Consensus 90 p~vt~~ev~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~ 169 (428)
|++|++|+++||++|||||||++||||||||||++||+.+|+.|++|++|+|+++|.++|||+.||||||+||++++|+|
T Consensus 96 p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGGi~~dP~~~s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~ 175 (449)
T 1bgv_A 96 PSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGY 175 (449)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhhCCCCCCccEEEECCCccCCHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCE
Q psy8194 170 MMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAK 249 (428)
Q Consensus 170 ~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Gak 249 (428)
|+|+|+++.++..++++||||..+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.|+|
T Consensus 176 ~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~Gak 255 (449)
T 1bgv_A 176 MYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAK 255 (449)
T ss_dssp HHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHCCCE
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCeeeCCCCC----CHHHHHHHHHhc-CCCcCCCC---ceeccCCCcccccCceEEecccccccccccccccc
Q psy8194 250 IVAIQDDKTTIYNPNGF----NIPKLQKYVTFT-RSIKDFNE---GEKINDSKEFWSIPCDILIPAAIEDQITINNANNV 321 (428)
Q Consensus 250 vVaVsD~~G~i~n~~Gl----D~~~l~~~~~~~-g~l~~~~~---~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l 321 (428)
||+|+|++|++|||+|| |+++|+++++++ +++.+|+. ++.++ ++++|+++||||+|||++|+||.+||++|
T Consensus 256 vVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~-~~e~~~~~~Dil~P~A~~~~I~~~na~~l 334 (449)
T 1bgv_A 256 AVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFP-GEKPWGQKVDIIMPCATQNDVDLEQAKKI 334 (449)
T ss_dssp EEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEE-TCCGGGSCCSEEECCSCTTCBCHHHHHHH
T ss_pred EEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeC-chhhhcCCcceeeccccccccchhhHHHH
Confidence 99999999999999999 778899998876 78988864 67787 78899999999999999999999999999
Q ss_pred cc---eEEEecCCCCCCHHHHHHHHHC-CCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHH
Q psy8194 322 TA---KIILEGANGPTTTEADDILRDK-GIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIW 397 (428)
Q Consensus 322 ~a---kiIvegAN~p~t~ea~~iL~~r-GI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~ 397 (428)
+| |+|+||||+|+||+|+++|++| ||+|+||+++|||||++|||||+||+++..|++|+|+++|+++|.++|+.++
T Consensus 335 ~a~g~kiV~EgAN~p~T~eA~~~l~~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~L~~~m~~~~~~v~ 414 (449)
T 1bgv_A 335 VANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFEMSQNSERLSWTAEEVDSKLHQVMTDIHDGSA 414 (449)
T ss_dssp HHTTCCEEECCSSSCBCHHHHHHHHHCTTCEEECHHHHTTHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEeCCCCcCCHHHHHHHHHcCCEEEEChHHhcCCCceeehhhhhcccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 87 9999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCC--CHHHHHHHHHHHHHHHHHHHcCC
Q psy8194 398 ELANTKKV--SLRTAAFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 398 ~~a~~~~~--~~r~aA~~~a~~rv~~a~~~rG~ 428 (428)
+.|+++++ ++|+|||+.|+.||+++|+.|||
T Consensus 415 ~~a~~~~~~~~~~~~A~i~~~~rv~~a~~~~G~ 447 (449)
T 1bgv_A 415 AAAERYGLGYNLVAGANIVGFQKIADAMMAQGI 447 (449)
T ss_dssp HHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHhCCCCCHHHHhhHHHHHHHHHHHHhcCc
Confidence 99999999 89999999999999999999995
No 12
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=100.00 E-value=2.1e-109 Score=856.24 Aligned_cols=411 Identities=45% Similarity=0.786 Sum_probs=401.3
Q ss_pred CCChHHHHHHHHHhhhcccCCChhHHhhcCCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecCCCCHHH
Q psy8194 17 DLGPWGVYLQQIDRVTPYLGSLSRWIEILKHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHPDVTLSE 96 (428)
Q Consensus 17 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~L~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p~vt~~e 96 (428)
+.+||++++++|++|+++++++|++++.|++|+|++.|++||+||||++++|+|||||||+++||+||||||||+++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~~~~~~p~~~d~G~~~~~~g~rv~~~~~~Gp~kGG~R~~~~~~~~e 81 (419)
T 1gtm_A 2 EADPYEIVIKQLERAAQYMEISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPEETLST 81 (419)
T ss_dssp -CTHHHHHHHHHHHHGGGSCCCHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTTCCHHH
T ss_pred CccHHHHHHHHHHHHHHHhCCChhhhhcCCCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCCHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhhhhccccCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhh
Q psy8194 97 IIALSGWMTIKNAAVNIPYGGAKGGIRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYST 176 (428)
Q Consensus 97 v~~LA~~Mt~K~Al~~lp~GGaKggI~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~ 176 (428)
+++||++|||||||++||||||||||++||+.+|+.|+||++|+|+++|.+++||++||||||+||++++|+||+++|++
T Consensus 82 v~~La~~mt~Knal~~lp~GG~Kggi~~dP~~~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~~~~m~~~~~~y~~ 161 (419)
T 1gtm_A 82 VKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYET 161 (419)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcCC--ceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCC-CCCceEEEEeccHHHHHHHHHHHH-CCCEEEE
Q psy8194 177 KKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLN-IINSKISIQGFGNVGSVAANLFFK-AGAKIVA 252 (428)
Q Consensus 177 ~~g~~~~--~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~-l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVa 252 (428)
+.|+.++ +++||||..+|||.+|.++|||||+++++++++++|.+ ++|+||.||||||||+.+|++|.+ .|++|++
T Consensus 162 ~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~ 241 (419)
T 1gtm_A 162 ISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVA 241 (419)
T ss_dssp HHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred hhCCCCCccceEecCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEE
Confidence 9999777 89999999999999999999999999999999999998 999999999999999999999999 9999999
Q ss_pred EEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEEecccccccccccccccccceEEEecCCC
Q psy8194 253 IQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANG 332 (428)
Q Consensus 253 VsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIvegAN~ 332 (428)
++|++|.+|+++|+|+++|+++++..+++..||..+.++ .++++..+||||||||.+++||+++++.|+|+.|+||||.
T Consensus 242 ~sD~~g~~~~~~gvdl~~L~~~~d~~~~l~~l~~t~~i~-~~~l~~mk~dilIn~ArG~~Vde~a~~aL~~~~I~~aAne 320 (419)
T 1gtm_A 242 VSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNIT-NEELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANG 320 (419)
T ss_dssp EECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEEC-HHHHHHSCCSEEEECSCSCCBCTTGGGGCCCSEEECCSSS
T ss_pred EeCCCccccCccCCCHHHHHHHHHhcCEeecCccCeeeC-HHHHHhCCCCEEEECCCcccCCHHHHHHhcCCEEEEeeCC
Confidence 999999999999999999999998878888888777776 7788889999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHCCCceeccccccccchhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Q psy8194 333 PTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVSLRTAAF 412 (428)
Q Consensus 333 p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~ 412 (428)
|+|+++..+|..+||++.||+++|+|||++||+||+||+++.+|+.+++.++|+++|.+++.+++++|+++++++|+|||
T Consensus 321 P~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~~a~~~~~~~~~aA~ 400 (419)
T 1gtm_A 321 PVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYNIAKEKNIHMRDAAY 400 (419)
T ss_dssp CBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCcchHHHHhcCCEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCC
Q psy8194 413 IIGCTRVLQAHKTRGL 428 (428)
Q Consensus 413 ~~a~~rv~~a~~~rG~ 428 (428)
++|++||+++|+.|||
T Consensus 401 ~~a~~rv~~a~~~~g~ 416 (419)
T 1gtm_A 401 VVAVQRVYQAMLDRGW 416 (419)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999999999996
No 13
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=100.00 E-value=4.3e-90 Score=697.83 Aligned_cols=336 Identities=26% Similarity=0.367 Sum_probs=311.5
Q ss_pred CCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecCCCCHH----HHHHHHhHhhhhhccccCCCCCceeE
Q psy8194 46 KHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHPDVTLS----EIIALSGWMTIKNAAVNIPYGGAKGG 121 (428)
Q Consensus 46 ~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p~vt~~----ev~~LA~~Mt~K~Al~~lp~GGaKgg 121 (428)
..||+++.++-|. +.|+|||||||+++||+||||||||++|.+ |+++||++|||||||++|||||||||
T Consensus 8 ~~~e~v~~~~d~~-------~~~~~~~~~h~~~~GP~kGG~R~~p~v~~~~~~~ev~~La~~mt~K~al~~lp~GG~Kgg 80 (355)
T 1c1d_A 8 WDGEMTVTRFDAM-------TGAHFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSV 80 (355)
T ss_dssp CCSSEEEEEEETT-------TTEEEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCccEEEEEEccc-------cceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhhCCCCCCceee
Confidence 4789988877663 579999999999999999999999999866 89999999999999999999999999
Q ss_pred Eec-CCCC-CCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhhhcCCcCCceeecccccCCCcCCC
Q psy8194 122 IRV-NPKN-LSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGR 199 (428)
Q Consensus 122 I~~-dP~~-~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r 199 (428)
|++ ||+. +|..|+|+++|+|.+++.+++|+ |||||||||+++||+||+++|+ ++||||..+|||.+|
T Consensus 81 i~~~dP~~~~s~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~---------~~tGk~~~~GGs~~~ 149 (355)
T 1c1d_A 81 IALPAPRHSIDPSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTE---------FVFGRSLERGGAGSS 149 (355)
T ss_dssp EECSSCGGGCCHHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCS---------CBCCCCGGGTSCCCC
T ss_pred EeccCcccccChhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcC---------eeeccchhhCCCCCc
Confidence 999 9999 99999999999999999999985 8999999999999999999974 689999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhCC-CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhc
Q psy8194 200 QKATGRGVFIIGSKIASKINL-NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFT 278 (428)
Q Consensus 200 ~~aTg~Gv~~~~~~~~~~~g~-~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~ 278 (428)
.++|||||+++++++++++|. +++|+||+||||||||+++|++|++.|++|| ++|. |.++ .++.++.
T Consensus 150 ~~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~----------~~~~-~~~a~~~ 217 (355)
T 1c1d_A 150 AFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLL-VADT----------DTER-VAHAVAL 217 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHH-HHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEeC----------CccH-HHHHHhc
Confidence 999999999999999999998 8999999999999999999999999999999 9994 4544 4444442
Q ss_pred CCCcCCCCceeccCCCcccccCceEEecccccccccccccccccceEEEecCCCCCCH-HHHHHHHHCCCceeccccccc
Q psy8194 279 RSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTT-EADDILRDKGIILAPDVITNA 357 (428)
Q Consensus 279 g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIvegAN~p~t~-ea~~iL~~rGI~viPD~laNa 357 (428)
+++.++ .+++|..+||||+||+.+++||.+|++.++|++|+|+||+|+|+ +|.++|+++||+++||+++|+
T Consensus 218 -------ga~~v~-~~ell~~~~DIliP~A~~~~I~~~~~~~lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~~aNa 289 (355)
T 1c1d_A 218 -------GHTAVA-LEDVLSTPCDVFAPCAMGGVITTEVARTLDCSVVAGAANNVIADEAASDILHARGILYAPDFVANA 289 (355)
T ss_dssp -------TCEECC-GGGGGGCCCSEEEECSCSCCBCHHHHHHCCCSEECCSCTTCBCSHHHHHHHHHTTCEECCHHHHTT
T ss_pred -------CCEEeC-hHHhhcCccceecHhHHHhhcCHHHHhhCCCCEEEECCCCCCCCHHHHHHHHhCCEEEECCeEEcC
Confidence 356666 78899999999999999999999999999999999999999985 999999999999999999999
Q ss_pred cchhhhH-HHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHc
Q psy8194 358 GGVIVSY-FEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVSLRTAAFIIGCTRVLQAHKTR 426 (428)
Q Consensus 358 GGVi~s~-~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~a~~rv~~a~~~r 426 (428)
|||++|| ||| +.|++|+|+++|+++| +++++|++.|+++++++|+|||++|++||+++|..+
T Consensus 290 GGV~~s~~~E~------~~w~~e~v~~~l~~i~-~~~~~i~~~~~~~~~~~~~aA~~~a~~rv~~a~~~~ 352 (355)
T 1c1d_A 290 GGAIHLVGREV------LGWSESVVHERAVAIG-DTLNQVFEISDNDGVTPDEAARTLAGRRAREASTTT 352 (355)
T ss_dssp HHHHHHHHHHT------TCCCHHHHHHHHHTHH-HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTC---
T ss_pred CCeeeeeeehh------cCCCHHHHHHHHHHHH-HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhhc
Confidence 9999999 999 6899999999999999 789999999999999999999999999999998654
No 14
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=3.3e-86 Score=672.49 Aligned_cols=336 Identities=24% Similarity=0.322 Sum_probs=311.6
Q ss_pred CCCceEEEEEEEEEeCCCeeeeeEEEEEEecCCCCCCCCCeeecCCCCHH----HHHHHHhHhhhhhccccCCCCCceeE
Q psy8194 46 KHPKKILIVDVPIEHDNGEVFHYEGYRVQHNILRGPGKGGVRFHPDVTLS----EIIALSGWMTIKNAAVNIPYGGAKGG 121 (428)
Q Consensus 46 ~~p~r~~~v~~pv~~d~G~~~~~~G~rv~h~~~~GPakGGiR~~p~vt~~----ev~~LA~~Mt~K~Al~~lp~GGaKgg 121 (428)
..||+++.++-|. ..|+|||||||+++||+||||||||++|.+ |+++||++|||||||++|||||||||
T Consensus 10 ~~~e~v~~~~d~~-------~~~~~~~~~h~~~~Gp~kGG~R~~p~v~~~~~~~e~~~La~~mt~K~al~~lp~GG~Kgg 82 (364)
T 1leh_A 10 YDYEQLVFCQDEA-------SGLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTV 82 (364)
T ss_dssp HTCCEEEEEEETT-------TTEEEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred cCCeEEEEEEccC-------cceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhcCCCCcCcceE
Confidence 3588888777543 579999999999999999999999999876 89999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhhhcCCcCCceeecccccCCCcCCCCC
Q psy8194 122 IRVNPKNLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQK 201 (428)
Q Consensus 122 I~~dP~~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~ 201 (428)
|++||+.+|. |+++|+|.+++.+++|+ ||||||+||++++|+||+++|+ ++||||+.+|||.+|.+
T Consensus 83 i~~dP~~~~~---~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~~m~~l~~~~~---------~~tGK~~~~ggs~~~~~ 148 (364)
T 1leh_A 83 IIGDPFADKN---EDMFRALGRFIQGLNGR--YITAEDVGTTVDDMDLIHQETD---------YVTGISPAFGSSGNPSP 148 (364)
T ss_dssp EESCTTTTCC---HHHHHHHHHHHHTTTTS--EEBCBCTTCCHHHHHHHHTTCS---------CBCSCCHHHHHHCCHHH
T ss_pred EeCCCCCCCH---HHHHHHHHHHHHHhcCc--eEEcccCCCCHHHHHHHHHhcc---------hhcccccccCCCCCccc
Confidence 9999999874 55788888899999885 8999999999999999999974 68999999999999999
Q ss_pred hhHHHHHHHHHHHHHH-hCC-CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcC
Q psy8194 202 ATGRGVFIIGSKIASK-INL-NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR 279 (428)
Q Consensus 202 aTg~Gv~~~~~~~~~~-~g~-~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g 279 (428)
+||+||++++++++++ +|. +++|++|+|||+||||+.+|+.|.+.|++|+ |+| +|.+++.++.++.+
T Consensus 149 aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVv-v~D----------~~~~~l~~~a~~~g 217 (364)
T 1leh_A 149 VTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLV-VTD----------VNKAAVSAAVAEEG 217 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCEEE-EEc----------CCHHHHHHHHHHcC
Confidence 9999999999999998 487 8999999999999999999999999999998 999 68888888877642
Q ss_pred CCcCCCCceeccCCCcccccCceEEecccccccccccccccccceEEEecCCCCCC-HHHHHHHHHCCCceecccccccc
Q psy8194 280 SIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT-TEADDILRDKGIILAPDVITNAG 358 (428)
Q Consensus 280 ~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~akiIvegAN~p~t-~ea~~iL~~rGI~viPD~laNaG 358 (428)
++.++ .++++..+|||++||+.+++||.++++.++|++|+|+||+|+| +++.++|+++||.++||+++|+|
T Consensus 218 -------a~~v~-~~~ll~~~~DIvip~a~~~~I~~~~~~~lg~~iV~e~An~p~t~~ea~~~L~~~Gi~~~Pd~~~NaG 289 (364)
T 1leh_A 218 -------ADAVA-PNAIYGVTCDIFAPCALGAVLNDFTIPQLKAKVIAGSADNQLKDPRHGKYLHELGIVYAPDYVINAG 289 (364)
T ss_dssp -------CEECC-GGGTTTCCCSEEEECSCSCCBSTTHHHHCCCSEECCSCSCCBSSHHHHHHHHHHTCEECCHHHHTTH
T ss_pred -------CEEEC-hHHHhccCCcEeeccchHHHhCHHHHHhCCCcEEEeCCCCCcccHHHHHHHHhCCCEEecceeecCC
Confidence 45566 7788999999999999999999999999999999999999987 59999999999999999999999
Q ss_pred chhhhHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHcCC
Q psy8194 359 GVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVSLRTAAFIIGCTRVLQAHKTRGL 428 (428)
Q Consensus 359 GVi~s~~E~~qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~a~~rv~~a~~~rG~ 428 (428)
||++||||| +.|++|+|+++|+++| +++++|++.|+++++++|+|||.+|++||+++++.|||
T Consensus 290 Gv~~s~~E~------~~~~~e~v~~~l~~i~-~~~~~i~~~~~~~~~~~~~aA~~~a~~ri~~a~~~~~~ 352 (364)
T 1leh_A 290 GVINVADEL------YGYNRTRAMKRVDGIY-DSIEKIFAISKRDGVPSYVAADRMAEERIAKVAKARSQ 352 (364)
T ss_dssp HHHHHHHGG------GCCCHHHHHHHHTHHH-HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ceEEEEEee------cCCCHHHHHHHHHHHH-HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999 5799999999999998 78999999999999999999999999999999999995
No 15
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.35 E-value=1.2e-06 Score=87.45 Aligned_cols=169 Identities=14% Similarity=0.094 Sum_probs=107.0
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC-------CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA-------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKE 295 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~-------GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~ 295 (428)
+..+|+|.|+|+||+.+++.|.+. +.+|++|+|++...++++ +|+++..+.+++.+.+..+ .++ .++
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~-idl~~~~~~~~~~g~~~~~----~~d-~~e 76 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN-LDISSIISNKEKTGRISDR----AFS-GPE 76 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS-CCHHHHHHHHHHHSCSCSS----BCC-SGG
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc-cCHHHHHHHhhhcCCCCcc----cCC-HHH
Confidence 457899999999999999999773 679999999999999999 9999888777666644332 123 555
Q ss_pred cc-ccCceEEeccccccccc---cccccc-c--cceEEEecCCCCCCHHH---HHHHHHCCCceeccccccccch---hh
Q psy8194 296 FW-SIPCDILIPAAIEDQIT---INNANN-V--TAKIILEGANGPTTTEA---DDILRDKGIILAPDVITNAGGV---IV 362 (428)
Q Consensus 296 il-~~~~DIliPaA~~~~It---~~na~~-l--~akiIvegAN~p~t~ea---~~iL~~rGI~viPD~laNaGGV---i~ 362 (428)
++ +.++||++.|+..+... .+.+.. + +..+|++ --.+++.+. .+.-+++|+.+. |=++.||- +.
T Consensus 77 ~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta-NK~~la~~~~eL~~lA~~~g~~~~--~Ea~vg~giPii~ 153 (325)
T 3ing_A 77 DLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA-NKSGLANKWHDIMDSANQNSKYIR--YEATVAGGVPLFS 153 (325)
T ss_dssp GGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC-CCHHHHHHHHHHHHHHHHHTCCEE--CGGGSSTTSCCHH
T ss_pred HhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEc-CchhHHHHHHHHHHHHHHcCCeEE--EEeeecccCHHHH
Confidence 55 56899999999765221 122222 2 3334432 122343333 344567888665 34444433 33
Q ss_pred hHHHHHhhcccCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy8194 363 SYFEWVQNLSNLL---------WTEQEINLRLNNIICNAFDAIWELANTKKV 405 (428)
Q Consensus 363 s~~E~~qn~~~~~---------w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~ 405 (428)
.-.+++ .+.. =+-.-+..++++ ...|.+++..|++.|.
T Consensus 154 ~l~~~l---~g~~I~~i~Gi~nGT~nyil~~m~~--g~~f~~~l~~Aq~~Gy 200 (325)
T 3ing_A 154 VLDYSI---LPSKVKRFRGIVSSTINYVIRNMAN--GRSLRDVVDDAIKKGI 200 (325)
T ss_dssp HHHHTC---TTCCEEEEEEECCHHHHHHHHHHHT--TCCHHHHHHHHHHHTC
T ss_pred HHHHHh---hCCCeeEEEEEEEeeeeEEeecccC--CCCHHHHHHHHHHcCC
Confidence 333333 2111 023445556633 3489999999999886
No 16
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.20 E-value=1.1e-05 Score=81.96 Aligned_cols=158 Identities=11% Similarity=0.149 Sum_probs=108.6
Q ss_pred CcccCCCCCCCHHHHHHHHHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEec
Q psy8194 153 KDIPAPDVGTDMQIMSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGF 232 (428)
Q Consensus 153 ~dipapDvgt~~~~ma~~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGf 232 (428)
+.|-....|++.-+++++.+. | =.|+.-|- ....+++-.++..+..+.++++.++.|++|.|+|+
T Consensus 60 k~I~~~~~G~D~iD~~~~~~~-----g----I~v~n~pg------~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGl 124 (380)
T 2o4c_A 60 RFVGTCTIGTDHLDLDYFAEA-----G----IAWSSAPG------CNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGA 124 (380)
T ss_dssp CEEEECSSCSTTBCHHHHHHH-----T----CEEECCTT------TTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECC
T ss_pred eEEEEcCcccchhhHHHHHhC-----C----CEEEeCCC------cChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeC
Confidence 456677888887778877543 2 12333331 23467777888888888888999999999999999
Q ss_pred cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEEecccc---
Q psy8194 233 GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI--- 309 (428)
Q Consensus 233 GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~--- 309 (428)
|++|+.+|+.|...|.+|+ +.|.. .+. ... +....+ .++++. +|||++.|..
T Consensus 125 G~IG~~vA~~l~~~G~~V~-~~d~~----------~~~-----~~~-------g~~~~~-l~ell~-~aDvV~l~~Plt~ 179 (380)
T 2o4c_A 125 GQVGGRLVEVLRGLGWKVL-VCDPP----------RQA-----REP-------DGEFVS-LERLLA-EADVISLHTPLNR 179 (380)
T ss_dssp SHHHHHHHHHHHHTTCEEE-EECHH----------HHH-----HST-------TSCCCC-HHHHHH-HCSEEEECCCCCS
T ss_pred CHHHHHHHHHHHHCCCEEE-EEcCC----------hhh-----hcc-------CcccCC-HHHHHH-hCCEEEEeccCcc
Confidence 9999999999999999986 45521 111 111 111122 445554 8999999873
Q ss_pred ------ccccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCcee
Q psy8194 310 ------EDQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGIILA 350 (428)
Q Consensus 310 ------~~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~vi 350 (428)
.+.|+++....++ -.+++..+.+++ ..+ ..+.|++++|.-.
T Consensus 180 ~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A 229 (380)
T 2o4c_A 180 DGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEV 229 (380)
T ss_dssp SSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEE
T ss_pred ccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceE
Confidence 4556666666665 458888888885 443 4578888877644
No 17
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.02 E-value=0.00015 Score=69.10 Aligned_cols=135 Identities=11% Similarity=0.037 Sum_probs=89.5
Q ss_pred HHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceecc
Q psy8194 212 SKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN 291 (428)
Q Consensus 212 ~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~ 291 (428)
..++++.+.+++| ++.|+|.|++|+.+++.|.+.|++| .|+|+ +.++..++.++.+. . .+
T Consensus 105 ~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v-~v~~r----------~~~~~~~l~~~~~~-------~-~~ 164 (263)
T 2d5c_A 105 LEALKAGGIPLKG-PALVLGAGGAGRAVAFALREAGLEV-WVWNR----------TPQRALALAEEFGL-------R-AV 164 (263)
T ss_dssp HHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SHHHHHHHHHHHTC-------E-EC
T ss_pred HHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEE-EEEEC----------CHHHHHHHHHHhcc-------c-hh
Confidence 3335566788999 9999999999999999999999965 58883 45566665554331 1 22
Q ss_pred CCCcccccCceEEeccccccccc--ccc--ccccc-ceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhhhHHH
Q psy8194 292 DSKEFWSIPCDILIPAAIEDQIT--INN--ANNVT-AKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFE 366 (428)
Q Consensus 292 ~~~~il~~~~DIliPaA~~~~It--~~n--a~~l~-akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~E 366 (428)
+.+++ .++||+|-|+..+... ... ...++ -++|++-+.+|...+..+.++++|+.++|..-.-.+..+.++..
T Consensus 165 ~~~~~--~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~~v~g~~mlv~q~~~a~~~ 242 (263)
T 2d5c_A 165 PLEKA--REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRL 242 (263)
T ss_dssp CGGGG--GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHHHHHHHHHHH
T ss_pred hHhhc--cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCEEECcHHHHHHHHHHHHHH
Confidence 13444 6899999999765321 011 23343 35888988777622456677889999887654444444455555
Q ss_pred HH
Q psy8194 367 WV 368 (428)
Q Consensus 367 ~~ 368 (428)
|.
T Consensus 243 w~ 244 (263)
T 2d5c_A 243 WT 244 (263)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 18
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.96 E-value=2.1e-05 Score=78.38 Aligned_cols=168 Identities=21% Similarity=0.262 Sum_probs=99.6
Q ss_pred ceEEEEeccHHHHHHHHHHHHC---------CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA---------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKE 295 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~---------GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~ 295 (428)
.+|+|.|+|+||+.+++.|.+. +.+|++|+|++....++ +|+.+..+.+...+.+.. . .|.++
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~--id~~~~~~~~~~~~~~~~-----~-~d~~~ 74 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD--FSLVEALRMKRETGMLRD-----D-AKAIE 74 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS--CCHHHHHHHHHHHSSCSB-----C-CCHHH
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc--cCHHHHHhhhccCccccC-----C-CCHHH
Confidence 5899999999999999999774 78999999999999887 888776554433222110 1 12456
Q ss_pred ccc-cCceEEecccccccccccccccc-------cceEEEecCCCCCCH---HHHHHHHHCCCceeccccccccch---h
Q psy8194 296 FWS-IPCDILIPAAIEDQITINNANNV-------TAKIILEGANGPTTT---EADDILRDKGIILAPDVITNAGGV---I 361 (428)
Q Consensus 296 il~-~~~DIliPaA~~~~It~~na~~l-------~akiIvegAN~p~t~---ea~~iL~~rGI~viPD~laNaGGV---i 361 (428)
++. .++|+++.|+..+.-+.+ +..+ +..+|+| .-.|++. +..+..+++|+.+. |-++.|+- +
T Consensus 75 ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~-NKkpla~~~~eL~~~A~~~g~~~~--~ea~v~~g~Pii 150 (327)
T 3do5_A 75 VVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTS-NKGPLVAEFHGLMSLAERNGVRLM--YEATVGGAMPVV 150 (327)
T ss_dssp HHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEEC-CSHHHHHHHHHHHHHHHHTTCCEE--CGGGSSTTSCCH
T ss_pred HhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEec-CchhhHHHHHHHHHHHHhhCCcEE--EEEEeeecCHHH
Confidence 664 579999999975543222 2221 3455555 2234443 33455677898765 44554443 2
Q ss_pred hhHHHHHhhc-----ccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy8194 362 VSYFEWVQNL-----SNL-LWTEQEINLRLNNIICNAFDAIWELANTKKV 405 (428)
Q Consensus 362 ~s~~E~~qn~-----~~~-~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~ 405 (428)
....|++..- .+. .=+-.-+..++.+. ...|.+++..|++.|.
T Consensus 151 ~~l~~~l~~~~I~~I~GIlnGT~nyilt~m~~~-g~~f~~~l~~Aq~~Gy 199 (327)
T 3do5_A 151 KLAKRYLALCEIESVKGIFNGTCNYILSRMEEE-RLPYEHILKEAQELGY 199 (327)
T ss_dssp HHHHTTTTTSCEEEEEEECCHHHHHHHHHHHHH-CCCHHHHHHHHHHTTS
T ss_pred HHHHHHhhCCCccEEEEEECCCcCcchhhcCcC-CcCHHHHHHHHHHcCC
Confidence 2222222110 000 00123344555322 3579999999999875
No 19
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.93 E-value=3e-05 Score=80.23 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=75.3
Q ss_pred HHHHHHHHHHH-HHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 205 RGVFIIGSKIA-SKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 205 ~Gv~~~~~~~~-~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
||+..++-..+ +..+..+.|++|.|+|+|+||+.+|+.|...|++|+ ++| .|+....+....
T Consensus 227 yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Vi-v~d----------~dp~~a~~A~~~------ 289 (464)
T 3n58_A 227 YGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVK-VTE----------VDPICALQAAMD------ 289 (464)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHT------
T ss_pred hcchHHHHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEe----------CCcchhhHHHhc------
Confidence 34433333333 345889999999999999999999999999999986 777 565544333221
Q ss_pred CCCceeccCCCcccccCceEEecccc-ccccccccccccc-ceEEEecCCCCC
Q psy8194 284 FNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANGPT 334 (428)
Q Consensus 284 ~~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~-akiIvegAN~p~ 334 (428)
+.+.++ .++++. .+||++.|+. .+.|+.+....++ --+|+..+.+..
T Consensus 290 --G~~vv~-LeElL~-~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 290 --GFEVVT-LDDAAS-TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp --TCEECC-HHHHGG-GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred --Cceecc-HHHHHh-hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence 223333 455554 7999999875 5688888777774 456777776654
No 20
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.88 E-value=8.2e-05 Score=76.75 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=73.0
Q ss_pred HHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCc
Q psy8194 216 SKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKE 295 (428)
Q Consensus 216 ~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~ 295 (428)
+..+..+.|++|+|+|+|++|+.+|+.|...|++|+ ++| .|.......... +.+..+ .++
T Consensus 203 ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Vi-v~D----------~~p~~a~~A~~~--------G~~~~s-L~e 262 (436)
T 3h9u_A 203 RATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVV-VTE----------VDPINALQAAME--------GYQVLL-VED 262 (436)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT--------TCEECC-HHH
T ss_pred HhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEC----------CChhhhHHHHHh--------CCeecC-HHH
Confidence 445888999999999999999999999999999985 777 455444443332 123333 455
Q ss_pred ccccCceEEecccc-ccccccccccccc-ceEEEecCCCCC
Q psy8194 296 FWSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANGPT 334 (428)
Q Consensus 296 il~~~~DIliPaA~-~~~It~~na~~l~-akiIvegAN~p~ 334 (428)
++. .+||++.+.. .+.|+.+....++ -.+|+.-++++.
T Consensus 263 al~-~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 263 VVE-EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDT 302 (436)
T ss_dssp HTT-TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSGG
T ss_pred HHh-hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCCC
Confidence 554 7999998775 5789988888874 457888888874
No 21
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.87 E-value=0.00066 Score=65.21 Aligned_cols=128 Identities=10% Similarity=0.050 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCc
Q psy8194 203 TGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 282 (428)
Q Consensus 203 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~ 282 (428)
.+.|+..+++. .+.++++++++|.|.|.+|+.+++.|.+.|++|+ |+| -+.+++.+..++.+..
T Consensus 102 D~~G~~~~L~~----~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~-v~~----------R~~~~~~~la~~~~~~- 165 (271)
T 1nyt_A 102 DGVGLLSDLER----LSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVT-ITN----------RTVSRAEELAKLFAHT- 165 (271)
T ss_dssp HHHHHHHHHHH----HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHHTGGG-
T ss_pred CHHHHHHHHHh----cCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEE-EEE----------CCHHHHHHHHHHhhcc-
Confidence 47887777654 5778899999999999999999999999998874 777 4566666665543211
Q ss_pred CCCCceeccCCCcccccCceEEecccccccccc-ccc--ccc-cceEEEecCCCCC-CHHHHHHHHHCCCc-ee
Q psy8194 283 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITI-NNA--NNV-TAKIILEGANGPT-TTEADDILRDKGII-LA 350 (428)
Q Consensus 283 ~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~-~na--~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~-vi 350 (428)
......+ .+++.+.++||+|-|+.-..-.. ..+ ..+ ...+|++-.-+|. |+. .+..+++|.. ++
T Consensus 166 --~~~~~~~-~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~t~~-~~~a~~~G~~~~~ 235 (271)
T 1nyt_A 166 --GSIQALS-MDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPF-LAWCEQRGSKRNA 235 (271)
T ss_dssp --SSEEECC-SGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHH-HHHHHHTTCCEEE
T ss_pred --CCeeEec-HHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccCCcCCHH-HHHHHHcCCCeec
Confidence 0111112 22221147999999986443210 001 112 3468899888885 654 4567889987 54
No 22
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.86 E-value=0.0003 Score=67.75 Aligned_cols=143 Identities=13% Similarity=0.078 Sum_probs=93.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCC
Q psy8194 202 ATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSI 281 (428)
Q Consensus 202 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l 281 (428)
.++.|+..+++ ..+.++++++|.|+|.|.+|+.+++.|.+.|++| .|+| -+.++..++.++.+
T Consensus 111 Td~~G~~~~l~----~~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V-~v~~----------r~~~~~~~l~~~~g-- 173 (275)
T 2hk9_A 111 TDWIGFLKSLK----SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKV-FLWN----------RTKEKAIKLAQKFP-- 173 (275)
T ss_dssp CHHHHHHHHHH----HHCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEE-EEEC----------SSHHHHHHHTTTSC--
T ss_pred CCHHHHHHHHH----HhCCCcCCCEEEEECchHHHHHHHHHHHHcCCEE-EEEE----------CCHHHHHHHHHHcC--
Confidence 35777777765 4577889999999999999999999999999965 5787 35566655544322
Q ss_pred cCCCCceeccCCCcccccCceEEecccccccccc--ccc--cccc-ceEEEecCCCCCCHHHHHHHHHCCCceecccccc
Q psy8194 282 KDFNEGEKINDSKEFWSIPCDILIPAAIEDQITI--NNA--NNVT-AKIILEGANGPTTTEADDILRDKGIILAPDVITN 356 (428)
Q Consensus 282 ~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~--~na--~~l~-akiIvegAN~p~t~ea~~iL~~rGI~viPD~laN 356 (428)
.+..++..+.+ .++||+|-|...+.... ... ..++ -++|++-+. ..|+- .+..+++|+.++|-.-.-
T Consensus 174 -----~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~-~~t~l-l~~a~~~g~~~v~g~~ml 245 (275)
T 2hk9_A 174 -----LEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY-KETKL-LKKAKEKGAKLLDGLPML 245 (275)
T ss_dssp -----EEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS-SCCHH-HHHHHHTTCEEECSHHHH
T ss_pred -----CeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC-ChHHH-HHHHHHCcCEEECCHHHH
Confidence 22222133444 48999999987654311 111 2232 468888888 44543 345567899998875555
Q ss_pred ccchhhhHHHHHh
Q psy8194 357 AGGVIVSYFEWVQ 369 (428)
Q Consensus 357 aGGVi~s~~E~~q 369 (428)
.+.-+.++..|..
T Consensus 246 v~q~~~a~~~w~g 258 (275)
T 2hk9_A 246 LWQGIEAFKIWNG 258 (275)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHC
Confidence 5555555555643
No 23
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.85 E-value=7.6e-05 Score=76.88 Aligned_cols=108 Identities=11% Similarity=0.129 Sum_probs=75.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCc
Q psy8194 203 TGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 282 (428)
Q Consensus 203 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~ 282 (428)
|+.+++.+++ +..+..+.|++|+|.|+|++|+.+|+.|...|++|+ ++| .|+....+....
T Consensus 202 t~~s~~~gi~---rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Vi-v~D----------~dp~ra~~A~~~----- 262 (435)
T 3gvp_A 202 CRESILDGLK---RTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVY-VTE----------IDPICALQACMD----- 262 (435)
T ss_dssp HHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT-----
T ss_pred hHHHHHHHHH---HhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEe----------CChhhhHHHHHc-----
Confidence 4444444443 335778999999999999999999999999999975 778 555444333322
Q ss_pred CCCCceeccCCCcccccCceEEecccc-ccccccccccccc-ceEEEecCCCCC
Q psy8194 283 DFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANGPT 334 (428)
Q Consensus 283 ~~~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~-akiIvegAN~p~ 334 (428)
+.+..+ .++++. .+||++.|+. .+.|+.+....++ -.+|+.-++++.
T Consensus 263 ---G~~v~~-Leeal~-~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 263 ---GFRLVK-LNEVIR-QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp ---TCEECC-HHHHTT-TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred ---CCEecc-HHHHHh-cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 122333 344443 7999999865 6788888777774 457888888875
No 24
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.84 E-value=9e-05 Score=72.08 Aligned_cols=116 Identities=18% Similarity=0.230 Sum_probs=78.2
Q ss_pred HHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceec--c
Q psy8194 214 IASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI--N 291 (428)
Q Consensus 214 ~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i--~ 291 (428)
+++..+.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|. +.+++.... +.| .+.+ +
T Consensus 145 ~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~dr----------~~~~~~~~~-~~g-------~~~~~~~ 205 (293)
T 3d4o_A 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVK-VGAR----------ESDLLARIA-EMG-------MEPFHIS 205 (293)
T ss_dssp HHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES----------SHHHHHHHH-HTT-------SEEEEGG
T ss_pred HHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEEC----------CHHHHHHHH-HCC-------CeecChh
Confidence 44556778999999999999999999999999999885 6663 333433322 222 2222 1
Q ss_pred CCCcccccCceEEeccccccccccccccccc-ceEEEecCCCCCCHHHHHHHHHCCCcee
Q psy8194 292 DSKEFWSIPCDILIPAAIEDQITINNANNVT-AKIILEGANGPTTTEADDILRDKGIILA 350 (428)
Q Consensus 292 ~~~~il~~~~DIliPaA~~~~It~~na~~l~-akiIvegAN~p~t~ea~~iL~~rGI~vi 350 (428)
+.++++ .++||++-|...+.++.+....++ -.+++.-+-+|..-+. +..+++|+.++
T Consensus 206 ~l~~~l-~~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 206 KAAQEL-RDVDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF-RYAEKRGIKAL 263 (293)
T ss_dssp GHHHHT-TTCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH-HHHHHHTCEEE
T ss_pred hHHHHh-cCCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH-HHHHHCCCEEE
Confidence 122333 479999999988888876665553 3577777766642222 55567788764
No 25
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.80 E-value=0.00023 Score=69.29 Aligned_cols=117 Identities=21% Similarity=0.275 Sum_probs=80.2
Q ss_pred HHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceec--cCC
Q psy8194 216 SKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI--NDS 293 (428)
Q Consensus 216 ~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i--~~~ 293 (428)
+..+.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|. +.+++.+..+ .| .+.+ .+.
T Consensus 149 ~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~d~----------~~~~~~~~~~-~g-------~~~~~~~~l 209 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVK-VGAR----------SSAHLARITE-MG-------LVPFHTDEL 209 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEE-EEES----------SHHHHHHHHH-TT-------CEEEEGGGH
T ss_pred HhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEE-EEEC----------CHHHHHHHHH-CC-------CeEEchhhH
Confidence 445778999999999999999999999999999885 6663 3344433322 11 2221 112
Q ss_pred CcccccCceEEeccccccccccccccccc-ceEEEecCCCCCCHHHHHHHHHCCCcee--ccc
Q psy8194 294 KEFWSIPCDILIPAAIEDQITINNANNVT-AKIILEGANGPTTTEADDILRDKGIILA--PDV 353 (428)
Q Consensus 294 ~~il~~~~DIliPaA~~~~It~~na~~l~-akiIvegAN~p~t~ea~~iL~~rGI~vi--PD~ 353 (428)
++++ .+||+++-|...+.++.+....++ -.+++.-+-+|..-+. +...++|+.++ |..
T Consensus 210 ~~~l-~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~ 270 (300)
T 2rir_A 210 KEHV-KDIDICINTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF-KYAEKQGIKALLAPGL 270 (300)
T ss_dssp HHHS-TTCSEEEECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCH
T ss_pred HHHh-hCCCEEEECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH-HHHHHCCCEEEECCCC
Confidence 3333 479999999998888877666663 4578887777753223 55667898765 544
No 26
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.75 E-value=0.00013 Score=74.05 Aligned_cols=124 Identities=16% Similarity=0.136 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCC---CCHHHHHHHHHhc
Q psy8194 202 ATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNG---FNIPKLQKYVTFT 278 (428)
Q Consensus 202 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~G---lD~~~l~~~~~~~ 278 (428)
-|+-=+..++..+++-.|.++++.||+|.|.|.+|..+|++|...|++=|-++|++|-++.... |+. ..+...+.
T Consensus 170 GTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~--~k~~~A~~ 247 (388)
T 1vl6_A 170 GTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNE--YHLEIARI 247 (388)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSH--HHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCH--HHHHHHHh
Confidence 3444445566777777788999999999999999999999999999954469999999997653 543 33332221
Q ss_pred CCCcCCCCceeccCCCcccccCceEEecccccccccccccccccc-eEEEecCCCCC
Q psy8194 279 RSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTA-KIILEGANGPT 334 (428)
Q Consensus 279 g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l~a-kiIvegAN~p~ 334 (428)
-. .+. . ..+..+.+ ..+||||=++-++.+|++-+.+.+- .+|.+-|| |+
T Consensus 248 ~~--~~~--~-~~~L~eav-~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN-Pt 297 (388)
T 1vl6_A 248 TN--PER--L-SGDLETAL-EGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN-PV 297 (388)
T ss_dssp SC--TTC--C-CSCHHHHH-TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS-SS
T ss_pred hh--ccC--c-hhhHHHHH-ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC-CC
Confidence 11 110 0 01022333 2589999999999999999988743 39999999 65
No 27
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.64 E-value=0.00038 Score=70.20 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=74.0
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCE-EEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAK-IVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW 297 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~Gak-vVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il 297 (428)
+.++.|++|.|+|+|++|+.+|+.|...|++ |+ +.|. .....+.. .+.| ....++.++++
T Consensus 159 ~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~-~~d~-------~~~~~~~~----~~~g-------~~~~~~l~ell 219 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRIGYRVLERLVPFNPKELL-YYDY-------QALPKDAE----EKVG-------ARRVENIEELV 219 (364)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEE-EECS-------SCCCHHHH----HHTT-------EEECSSHHHHH
T ss_pred cccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEE-EECC-------CccchhHH----HhcC-------cEecCCHHHHH
Confidence 4579999999999999999999999999997 85 4553 22233221 1211 22222144555
Q ss_pred ccCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc
Q psy8194 298 SIPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 348 (428)
Q Consensus 298 ~~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~ 348 (428)
. +|||++.|... +.|+++....++ -.+++.-+.+++ ..+ ..+.|++.+|.
T Consensus 220 ~-~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 220 A-QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLR 277 (364)
T ss_dssp H-TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred h-cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCc
Confidence 3 89999998865 456665556664 357788888875 444 46788888765
No 28
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.61 E-value=0.0017 Score=63.15 Aligned_cols=126 Identities=11% Similarity=0.105 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCc
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 282 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~ 282 (428)
+.|...++ +..+.++++++++|.|.|.+|+.++..|.+.|+ +| .|.++ +.++..++.++.+..
T Consensus 110 ~~G~~~~L----~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v-~v~~R----------~~~~a~~la~~~~~~- 173 (281)
T 3o8q_A 110 GEGLVQDL----LAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASI-TVTNR----------TFAKAEQLAELVAAY- 173 (281)
T ss_dssp HHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEE-EEEES----------SHHHHHHHHHHHGGG-
T ss_pred HHHHHHHH----HHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeE-EEEEC----------CHHHHHHHHHHhhcc-
Confidence 67776665 456788999999999999999999999999997 65 57773 556666655543211
Q ss_pred CCCCceeccCCCcccccCceEEeccccccccccc---ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCc-ee
Q psy8194 283 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITIN---NANNV-TAKIILEGANGPT-TTEADDILRDKGII-LA 350 (428)
Q Consensus 283 ~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~---na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~-vi 350 (428)
......+ .+++. .++||+|-|+.-+..... ....+ ...+|++-.-+|. |+-. +..+++|+. ++
T Consensus 174 --~~~~~~~-~~~l~-~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~ll-~~A~~~G~~~~~ 242 (281)
T 3o8q_A 174 --GEVKAQA-FEQLK-QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFN-QWARQHGCAQAI 242 (281)
T ss_dssp --SCEEEEE-GGGCC-SCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCCHHH-HHHHHTTCSEEE
T ss_pred --CCeeEee-HHHhc-CCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCHHH-HHHHHCCCCEEE
Confidence 0122223 33333 689999988865432211 11223 3468899988885 6644 567889986 54
No 29
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.59 E-value=0.00053 Score=69.68 Aligned_cols=174 Identities=20% Similarity=0.188 Sum_probs=104.7
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcC
Q psy8194 200 QKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR 279 (428)
Q Consensus 200 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g 279 (428)
..+++--++..+-.+.++.|.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|. .. +..+
T Consensus 95 ~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~-~~d~------------~~-----~~~~ 156 (381)
T 3oet_A 95 AIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTL-LCDP------------PR-----AARG 156 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEE-EECH------------HH-----HHTT
T ss_pred cchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EECC------------Ch-----HHhc
Confidence 3455656666666777888999999999999999999999999999999986 4452 10 1111
Q ss_pred CCcCCCCceeccCCCcccccCceEEecccc---------ccccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCC
Q psy8194 280 SIKDFNEGEKINDSKEFWSIPCDILIPAAI---------EDQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGI 347 (428)
Q Consensus 280 ~l~~~~~~~~i~~~~~il~~~~DIliPaA~---------~~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI 347 (428)
.+....+ .++++ .+|||++-|.. .+.|+.+....++ -.+++..+-+++ ..+ ..+.|++++|
T Consensus 157 -----~~~~~~s-l~ell-~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i 229 (381)
T 3oet_A 157 -----DEGDFRT-LDELV-QEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQP 229 (381)
T ss_dssp -----CCSCBCC-HHHHH-HHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCC
T ss_pred -----cCcccCC-HHHHH-hhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCC
Confidence 0111222 44554 37899987764 3456666555553 468889998885 444 3578888777
Q ss_pred c-eeccccccccchhhhHHHHH-hhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy8194 348 I-LAPDVITNAGGVIVSYFEWV-QNLSNLLWTEQEINLRLNNIICNAFDAIWE 398 (428)
Q Consensus 348 ~-viPD~laNaGGVi~s~~E~~-qn~~~~~w~~e~v~~~l~~~m~~~~~~v~~ 398 (428)
. ..=|+..+=--.-.+.++.. --..|..|.-.+...++...+.+++.+.++
T Consensus 230 ~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~ 282 (381)
T 3oet_A 230 LSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIG 282 (381)
T ss_dssp EEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEeeccccCCCCcchhhhCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHc
Confidence 4 34455444332222222210 012455554445555555544455554443
No 30
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.59 E-value=0.001 Score=66.87 Aligned_cols=116 Identities=15% Similarity=0.213 Sum_probs=78.1
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.| +...+.+...+. +.+..++.++++
T Consensus 159 ~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~-~~d-------r~~~~~~~~~~~-----------g~~~~~~l~ell- 218 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLL-YHD-------RLQMAPELEKET-----------GAKFVEDLNEML- 218 (351)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEE-EEC-------SSCCCHHHHHHH-----------CCEECSCHHHHG-
T ss_pred cccccCCEEeEEEeCHHHHHHHHHHHHCCCEEE-EeC-------CCccCHHHHHhC-----------CCeEcCCHHHHH-
Confidence 457999999999999999999999999999985 444 333444333221 123333244555
Q ss_pred cCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc-eecccc
Q psy8194 299 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII-LAPDVI 354 (428)
Q Consensus 299 ~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~-viPD~l 354 (428)
.+|||++-|..- +.|+.+....++ -.+++.-|.+++ ..+ ..+.|++..|. ..=|++
T Consensus 219 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~ 283 (351)
T 3jtm_A 219 PKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVW 283 (351)
T ss_dssp GGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred hcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCC
Confidence 479999988753 356666555553 468999999886 444 45788887765 333443
No 31
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.58 E-value=0.0015 Score=63.74 Aligned_cols=130 Identities=13% Similarity=0.105 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHhC-CCCCCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCC
Q psy8194 203 TGRGVFIIGSKIASKIN-LNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS 280 (428)
Q Consensus 203 Tg~Gv~~~~~~~~~~~g-~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~ 280 (428)
.+.|+..+++ ..+ .++++++++|.|.|.+|+.++..|.+.|+ +| .|.+ -+.+++.++.++.+.
T Consensus 123 d~~G~~~~l~----~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V-~v~n----------R~~~ka~~la~~~~~ 187 (297)
T 2egg_A 123 DGLGYVQALE----EEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERI-DMAN----------RTVEKAERLVREGDE 187 (297)
T ss_dssp HHHHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEE-EEEC----------SSHHHHHHHHHHSCS
T ss_pred CHHHHHHHHH----HhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEE-EEEe----------CCHHHHHHHHHHhhh
Confidence 3566666654 456 78899999999999999999999999998 65 5888 456677666655432
Q ss_pred CcCCCCceecc--CCCcccccCceEEeccccccccccc-----ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCceec
Q psy8194 281 IKDFNEGEKIN--DSKEFWSIPCDILIPAAIEDQITIN-----NANNV-TAKIILEGANGPT-TTEADDILRDKGIILAP 351 (428)
Q Consensus 281 l~~~~~~~~i~--~~~~il~~~~DIliPaA~~~~It~~-----na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~viP 351 (428)
. +. ..++ +..+.+ .++||+|-|+..+..... ....+ ...+|++-.-+|. |+ -.+..+++|+.+++
T Consensus 188 ~--~~--~~~~~~~~~~~~-~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T~-ll~~A~~~G~~~v~ 261 (297)
T 2egg_A 188 R--RS--AYFSLAEAETRL-AEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETK-WLKEAKARGARVQN 261 (297)
T ss_dssp S--SC--CEECHHHHHHTG-GGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSCH-HHHHHHHTTCEEEC
T ss_pred c--cC--ceeeHHHHHhhh-ccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCCH-HHHHHHHCcCEEEC
Confidence 1 00 1211 011222 479999999875442110 11223 3468899888885 65 55667889998876
Q ss_pred cc
Q psy8194 352 DV 353 (428)
Q Consensus 352 D~ 353 (428)
-.
T Consensus 262 Gl 263 (297)
T 2egg_A 262 GV 263 (297)
T ss_dssp SH
T ss_pred CH
Confidence 53
No 32
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.54 E-value=0.00091 Score=65.67 Aligned_cols=171 Identities=14% Similarity=0.139 Sum_probs=103.9
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 301 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~ 301 (428)
.+.++|.|+|+|++|+.+|+.|.+.|.+|+ +.| .+.+++.+..+. +....++.++.+ .+|
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~-~~d----------r~~~~~~~l~~~--------g~~~~~~~~e~~-~~a 88 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQ-VWN----------RTPARAASLAAL--------GATIHEQARAAA-RDA 88 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHTT--------TCEEESSHHHHH-TTC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEE-EEc----------CCHHHHHHHHHC--------CCEeeCCHHHHH-hcC
Confidence 466899999999999999999999999975 677 567777666543 233333233433 479
Q ss_pred eEEeccccccccccccc------ccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchhh----------
Q psy8194 302 DILIPAAIEDQITINNA------NNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVIV---------- 362 (428)
Q Consensus 302 DIliPaA~~~~It~~na------~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi~---------- 362 (428)
|+++-|........+.. +.+ +-++|+...+.+. +.+..+.+.++|+.++.-.+. ||...
T Consensus 89 DvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~--g~~~~a~~g~l~i~~ 166 (320)
T 4dll_A 89 DIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVS--GGTVGAEQGTLVIMA 166 (320)
T ss_dssp SEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CHHHHHHHTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCc--CCHhHHhcCCeeEEe
Confidence 99999887543222222 122 3467887777653 345567788999988743222 33211
Q ss_pred ----hHHHHH----hhcccCCC----CHH----HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 363 ----SYFEWV----QNLSNLLW----TEQ----EINLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 363 ----s~~E~~----qn~~~~~w----~~e----~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
..++.+ +.+....+ ..- -+..-+...+...+.+.+..+++.|+++.+....+
T Consensus 167 gg~~~~~~~~~~ll~~~~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~ 234 (320)
T 4dll_A 167 GGKPADFERSLPLLKVFGRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAI 234 (320)
T ss_dssp ESCHHHHHHHHHHHHHHEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 112222 22100111 111 22233334444567888899999999988876655
No 33
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.54 E-value=0.00077 Score=65.82 Aligned_cols=168 Identities=11% Similarity=0.148 Sum_probs=102.0
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
+||.++|+|++|+.+|+.|.+.|++|+ +.| .+.+++.++.+. +++..+++.++. .+|||+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~-v~d----------r~~~~~~~l~~~--------G~~~~~s~~e~~-~~~dvv 65 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELV-VWN----------RTASKAEPLTKL--------GATVVENAIDAI-TPGGIV 65 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EC-----------------CTTTTT--------TCEECSSGGGGC-CTTCEE
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHHc--------CCeEeCCHHHHH-hcCCce
Confidence 589999999999999999999999985 667 334443333221 344444344444 479999
Q ss_pred eccccccccccc-----ccccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh--------------h
Q psy8194 305 IPAAIEDQITIN-----NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI--------------V 362 (428)
Q Consensus 305 iPaA~~~~It~~-----na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi--------------~ 362 (428)
+-|-.......+ -+..+ +-++|++..+... +.+..+.+.++|+.|+=-.+. ||.. -
T Consensus 66 i~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVs--Gg~~~a~~g~l~im~gG~~ 143 (297)
T 4gbj_A 66 FSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIF--ARPEAVRAKVGNICLSGNA 143 (297)
T ss_dssp EECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CCHHHHHHTCCEEEEEECH
T ss_pred eeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcC--CCccccccccceeecccch
Confidence 987664433222 12222 3457887777652 556678899999999854443 4431 1
Q ss_pred hHHHHHhh----ccc--CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 363 SYFEWVQN----LSN--LLWT--------EQEINLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 363 s~~E~~qn----~~~--~~w~--------~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
..||-++. ... +++- ..-++.-+...+...+.+.+..+++.|+++.+...++
T Consensus 144 ~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l 209 (297)
T 4gbj_A 144 GAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEML 209 (297)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 22332221 110 1111 1345556666667788899999999999998776554
No 34
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.53 E-value=0.001 Score=63.97 Aligned_cols=128 Identities=13% Similarity=0.110 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
+.|+..+++ +.+.++++++++|.|.|.+|+.++..|.+.|++|+ |++ -+.+++.++.++.+.
T Consensus 103 ~~G~~~~L~----~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~-v~~----------R~~~~a~~l~~~~~~--- 164 (272)
T 1p77_A 103 GIGLVTDLQ----RLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIV-LAN----------RTFSKTKELAERFQP--- 164 (272)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEE-EEE----------SSHHHHHHHHHHHGG---
T ss_pred HHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHHccc---
Confidence 777776664 46778999999999999999999999999998874 777 456666666544321
Q ss_pred CCCceeccCCCcccccCceEEecccccccccc-cccc--cc-cceEEEecCCCCC--CHHHHHHHHHCCCc-eec
Q psy8194 284 FNEGEKINDSKEFWSIPCDILIPAAIEDQITI-NNAN--NV-TAKIILEGANGPT--TTEADDILRDKGII-LAP 351 (428)
Q Consensus 284 ~~~~~~i~~~~~il~~~~DIliPaA~~~~It~-~na~--~l-~akiIvegAN~p~--t~ea~~iL~~rGI~-viP 351 (428)
+......+ .+++...++||+|-|+.-+.... ..++ .+ ...+|++-.-+|. |+- .+..+++|+. +++
T Consensus 165 ~~~~~~~~-~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~~t~l-l~~a~~~G~~~~v~ 237 (272)
T 1p77_A 165 YGNIQAVS-MDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPF-IALCKSLGLTNVSD 237 (272)
T ss_dssp GSCEEEEE-GGGCCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHH-HHHHHHTTCCCEEC
T ss_pred cCCeEEee-HHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCcCCHH-HHHHHHcCCCEeeC
Confidence 10111222 22221137999999987443210 0011 12 2467888888884 554 4567788987 664
No 35
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.52 E-value=0.0022 Score=62.54 Aligned_cols=175 Identities=12% Similarity=0.141 Sum_probs=105.3
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
++..++|.|+|+|++|+.+|+.|.+.|.+|+ +.| .+.+++.+..+. | ....++..+++ .+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~-~~d----------r~~~~~~~~~~~-g-------~~~~~~~~e~~-~~ 65 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVA-IWN----------RSPGKAAALVAA-G-------AHLCESVKAAL-SA 65 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSHHHHHHHHHH-T-------CEECSSHHHHH-HH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHC-C-------CeecCCHHHHH-hc
Confidence 4567899999999999999999999999885 667 566777666554 2 22323233333 36
Q ss_pred ceEEeccccccccccccc-----cc-ccceEEEecCCCCCC--HHHHHHHHHCCCceeccccc------cccchh-----
Q psy8194 301 CDILIPAAIEDQITINNA-----NN-VTAKIILEGANGPTT--TEADDILRDKGIILAPDVIT------NAGGVI----- 361 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na-----~~-l~akiIvegAN~p~t--~ea~~iL~~rGI~viPD~la------NaGGVi----- 361 (428)
||++|-|........+.+ .. ..-++|+.-.+.... .+..+.+.++|+.++.-.+. ..++.+
T Consensus 66 aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg 145 (306)
T 3l6d_A 66 SPATIFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTG 145 (306)
T ss_dssp SSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEE
T ss_pred CCEEEEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcC
Confidence 899999876543222211 11 245678877776643 35557788999998864332 122210
Q ss_pred -hhHHHHH----hhc-ccCCCC--HHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy8194 362 -VSYFEWV----QNL-SNLLWT--EQE-----INLRLNNIICNAFDAIWELANTKKVSLRTAAFIIG 415 (428)
Q Consensus 362 -~s~~E~~----qn~-~~~~w~--~e~-----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~a 415 (428)
-..+|.+ +.+ ....|- -+. ..+.+...+...+.+.+..+++.|+++.+...++.
T Consensus 146 ~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~ 212 (306)
T 3l6d_A 146 DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLLL 212 (306)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 1123333 222 112232 221 11122233346777888889999999988766553
No 36
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.50 E-value=0.0014 Score=64.13 Aligned_cols=168 Identities=15% Similarity=0.222 Sum_probs=108.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.++|+|++|+..|+.|.+.|+.|+ |.| .+.+++.++.+. +++..+++.++ ...|||+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~-v~d----------r~~~~~~~l~~~--------Ga~~a~s~~e~-~~~~dvv 63 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLN-VFD----------LVQSAVDGLVAA--------GASAARSARDA-VQGADVV 63 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHT--------TCEECSSHHHH-HTTCSEE
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEE-EEc----------CCHHHHHHHHHc--------CCEEcCCHHHH-HhcCCce
Confidence 489999999999999999999999984 777 677888777664 24444323333 3579999
Q ss_pred ecccccc-----ccccc--ccccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchhh------------
Q psy8194 305 IPAAIED-----QITIN--NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVIV------------ 362 (428)
Q Consensus 305 iPaA~~~-----~It~~--na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi~------------ 362 (428)
+-|-... ++... -++.+ +-++|++..+... +.+..+.++++|+.|+=-.+. ||+..
T Consensus 64 ~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVs--Gg~~~A~~G~L~imvGG 141 (300)
T 3obb_A 64 ISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVS--GGTAGAAAGTLTFMVGG 141 (300)
T ss_dssp EECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEE--SCHHHHHHTCEEEEEES
T ss_pred eecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCC--CCHHHHHhCCEEEEEeC
Confidence 9886533 33222 22333 3478888887753 567778899999999844443 55421
Q ss_pred --hHHHHHhhc----cc-CCC--------CHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 363 --SYFEWVQNL----SN-LLW--------TEQEINLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 363 --s~~E~~qn~----~~-~~w--------~~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
..||.++.+ .. ..+ ...-++.-+...+..++.+.+..+++.|+++.+...++
T Consensus 142 ~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl 208 (300)
T 3obb_A 142 DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIM 208 (300)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 122322211 00 000 02345555666666788899999999999998776554
No 37
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.49 E-value=0.0014 Score=63.68 Aligned_cols=170 Identities=15% Similarity=0.167 Sum_probs=102.2
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCcee-ccCCCcccccCc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEK-INDSKEFWSIPC 301 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~-i~~~~~il~~~~ 301 (428)
+.++|.|+|+|++|+.+|+.|.+.|.+|+ +.| .+.+++.+..+. | ... .++.++.+ .+|
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~-~~d----------r~~~~~~~~~~~-g-------~~~~~~~~~e~~-~~a 65 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTW-GAD----------LNPQACANLLAE-G-------ACGAAASAREFA-GVV 65 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT-T-------CSEEESSSTTTT-TTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEE-EEE----------CCHHHHHHHHHc-C-------CccccCCHHHHH-hcC
Confidence 44789999999999999999999999885 667 566777666554 2 222 23244444 479
Q ss_pred eEEeccccccccccc-------ccccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh----------
Q psy8194 302 DILIPAAIEDQITIN-------NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI---------- 361 (428)
Q Consensus 302 DIliPaA~~~~It~~-------na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi---------- 361 (428)
|+++-|........+ -.+.+ .-++|+...+.+. +.+..+.+.++|+.++.-.+. |+..
T Consensus 66 Dvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~--g~~~~a~~g~l~~~ 143 (303)
T 3g0o_A 66 DALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVS--GGAVKAAQGEMTVM 143 (303)
T ss_dssp SEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEE--SCHHHHHTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCC--CChhhhhcCCeEEE
Confidence 999998876432222 22333 3467787776553 234456788899987643222 3331
Q ss_pred ----hhHHHHHhhccc--------CC--CCHHH----HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 362 ----VSYFEWVQNLSN--------LL--WTEQE----INLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 362 ----~s~~E~~qn~~~--------~~--w~~e~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
-..+|.++.+-. .. ....+ ++..+...+...+.+.+..+++.++++.+...++
T Consensus 144 ~gg~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~ 214 (303)
T 3g0o_A 144 ASGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVV 214 (303)
T ss_dssp EECCHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 112333322210 00 11111 2233333344567888889999999988877655
No 38
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.47 E-value=0.00056 Score=68.04 Aligned_cols=109 Identities=13% Similarity=0.206 Sum_probs=74.4
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
|.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|. ...+.+...+. | .+..+ .++++
T Consensus 140 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~-~~d~-------~~~~~~~~~~~----g-------~~~~~-l~ell- 198 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAIGLAMADRLQGWGATLQ-YHEA-------KALDTQTEQRL----G-------LRQVA-CSELF- 198 (330)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEE-EECS-------SCCCHHHHHHH----T-------EEECC-HHHHH-
T ss_pred CCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECC-------CCCcHhHHHhc----C-------ceeCC-HHHHH-
Confidence 346899999999999999999999999999986 4453 22233322221 1 22223 44555
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~ 348 (428)
..|||++-|.. .+.|+.+....++ -.+++..+.+++ .. +..+.|++++|.
T Consensus 199 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 199 ASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp HHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCcc
Confidence 37899998865 3466666666664 468889888885 43 445788888765
No 39
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.46 E-value=0.0019 Score=62.56 Aligned_cols=127 Identities=20% Similarity=0.185 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCc
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 282 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~ 282 (428)
+.|...+ +++..+.++++++++|.|.|.+|+.++..|.+.|+ +| .|.++ +.++..++.++.+.
T Consensus 103 ~~G~~~~---lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v-~i~~R----------~~~~a~~la~~~~~-- 166 (272)
T 3pwz_A 103 GIGLLRD---IEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSEL-VIANR----------DMAKALALRNELDH-- 166 (272)
T ss_dssp HHHHHHH---HHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEE-EEECS----------CHHHHHHHHHHHCC--
T ss_pred HHHHHHH---HHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEE-EEEeC----------CHHHHHHHHHHhcc--
Confidence 6676665 13456788999999999999999999999999997 55 57774 56666666665432
Q ss_pred CCCCceeccCCCcccccCceEEeccccccccccc---ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCc-ee
Q psy8194 283 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITIN---NANNV-TAKIILEGANGPT-TTEADDILRDKGII-LA 350 (428)
Q Consensus 283 ~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~---na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~-vi 350 (428)
. ....++ .+++-..++||+|-|+.-+.-... ....+ +..+|++-.-+|. |+ -.+.-+++|+. ++
T Consensus 167 -~-~~~~~~-~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~-ll~~A~~~G~~~~~ 236 (272)
T 3pwz_A 167 -S-RLRISR-YEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTP-FLRLAREQGQARLA 236 (272)
T ss_dssp -T-TEEEEC-SGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCH-HHHHHHHHSCCEEE
T ss_pred -C-CeeEee-HHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCH-HHHHHHHCCCCEEE
Confidence 1 122333 334333689999988864432111 11223 4568899988895 66 34455788986 53
No 40
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.39 E-value=0.001 Score=66.46 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=73.4
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHH-HCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFF-KAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW 297 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~-~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il 297 (428)
+.++.|++|.|+|+|++|+.+|+.|. ..|.+|+ +.|.+ .-..+... +.+ ....++.++++
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~-~~d~~-------~~~~~~~~----~~g-------~~~~~~l~ell 218 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLV-YYDVA-------PADAETEK----ALG-------AERVDSLEELA 218 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECSS-------CCCHHHHH----HHT-------CEECSSHHHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEE-EECCC-------CcchhhHh----hcC-------cEEeCCHHHHh
Confidence 56799999999999999999999999 9999986 55532 22222221 111 22222133444
Q ss_pred ccCceEEecccccc-----ccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc-eeccccc
Q psy8194 298 SIPCDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII-LAPDVIT 355 (428)
Q Consensus 298 ~~~~DIliPaA~~~-----~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~-viPD~la 355 (428)
.+||+++.|...+ .|+.+....++ -.+++.-+.+++ +.+ ..+.|.+..|. ..-|+..
T Consensus 219 -~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 284 (348)
T 2w2k_A 219 -RRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHE 284 (348)
T ss_dssp -HHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCT
T ss_pred -ccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCC
Confidence 3799999997654 44444444454 357778888875 443 45678775543 3344443
No 41
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.39 E-value=0.0028 Score=62.37 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=69.9
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+ . +.. . ..+.| .+..+ .++++.
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~-------~-~~~---~-~~~~g-------~~~~~-l~ell~ 195 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRIGTKVGIIANAMGMKVL-AYDIL-------D-IRE---K-AEKIN-------AKAVS-LEELLK 195 (313)
T ss_dssp CCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEE-EECSS-------C-CHH---H-HHHTT-------CEECC-HHHHHH
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECCC-------c-chh---H-HHhcC-------ceecC-HHHHHh
Confidence 347899999999999999999999999999986 55532 1 211 1 12222 22223 445553
Q ss_pred cCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCC
Q psy8194 299 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGI 347 (428)
Q Consensus 299 ~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI 347 (428)
+||+++-|... +.|+++....++ -.+++.-+-+++ +.+ ..+.|++.+|
T Consensus 196 -~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i 251 (313)
T 2ekl_A 196 -NSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKV 251 (313)
T ss_dssp -HCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCE
T ss_pred -hCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCC
Confidence 79999988753 445555445553 457777777764 444 3577877765
No 42
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.37 E-value=0.00079 Score=67.63 Aligned_cols=109 Identities=11% Similarity=0.142 Sum_probs=74.1
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|.+ ... ... .+. +.+..++.++++
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~d~~----------~~~-~~~-~~~-------g~~~~~~l~ell- 213 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVL-VWGRE----------NSK-ERA-RAD-------GFAVAESKDALF- 213 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSH----------HHH-HHH-HHT-------TCEECSSHHHHH-
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEE-EECCC----------CCH-HHH-Hhc-------CceEeCCHHHHH-
Confidence 457899999999999999999999999999986 44421 111 111 121 233342244555
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC--CHHHHHHHHHCCCc
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT--TTEADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~--t~ea~~iL~~rGI~ 348 (428)
.+|||++-|.. .+.|+.+....++ -.+++..+.+++ +....+.|++..|.
T Consensus 214 ~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 271 (352)
T 3gg9_A 214 EQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPG 271 (352)
T ss_dssp HHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSS
T ss_pred hhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCcc
Confidence 47899988764 3456666666664 468888888885 44556889998874
No 43
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.36 E-value=0.0026 Score=66.25 Aligned_cols=177 Identities=14% Similarity=0.107 Sum_probs=108.6
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc-
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI- 299 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~- 299 (428)
-+..++|.|+|.|++|+.+|+.|.+.|..|+ +.| .+.+++.+..++.+ + .+....++.+++...
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~-v~~----------r~~~~~~~l~~~~~---~-~gi~~~~s~~e~v~~l 76 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVS-IFN----------RSREKTEEVIAENP---G-KKLVPYYTVKEFVESL 76 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEE-EEC----------SSHHHHHHHHHHST---T-SCEEECSSHHHHHHTB
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEE-EEe----------CCHHHHHHHHhhCC---C-CCeEEeCCHHHHHhCC
Confidence 4567899999999999999999999999874 667 46677766665432 0 122322223444432
Q ss_pred -CceEEeccccccccccccc----cccc-ceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh----------
Q psy8194 300 -PCDILIPAAIEDQITINNA----NNVT-AKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI---------- 361 (428)
Q Consensus 300 -~~DIliPaA~~~~It~~na----~~l~-akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi---------- 361 (428)
+||+++-|-..+....+.+ +.++ -++|+..+|+.. |.+..+.|.++|+.++.- .++||..
T Consensus 77 ~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~--pv~gg~~~a~~g~~i~~ 154 (480)
T 2zyd_A 77 ETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGT--GVSGGEEGALKGPSIMP 154 (480)
T ss_dssp CSSCEEEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE--EEESHHHHHHHCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCC--ccccCHhHHhcCCeEEe
Confidence 4999998876643333322 3333 469999999874 445567888899988743 2334332
Q ss_pred ---hhHHHHHhh----ccc--------CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHH
Q psy8194 362 ---VSYFEWVQN----LSN--------LLWT--------EQEINLRLNNIICNAFDAIWELANT-KKVSLRTAAFII 414 (428)
Q Consensus 362 ---~s~~E~~qn----~~~--------~~w~--------~e~v~~~l~~~m~~~~~~v~~~a~~-~~~~~r~aA~~~ 414 (428)
-..++.++. ... ..|- ..-+...+...+...+.+.+..+++ .|+++.+...++
T Consensus 155 gg~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~ 231 (480)
T 2zyd_A 155 GGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTF 231 (480)
T ss_dssp ESCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 112333322 111 1121 1223445555666788888889999 699988776554
No 44
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.36 E-value=0.0022 Score=61.60 Aligned_cols=170 Identities=12% Similarity=0.145 Sum_probs=99.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+|+.|.+.|.+|+ +.| .+.+++.+..+. +....++.++.+ .+||++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~-~~d----------r~~~~~~~~~~~--------g~~~~~~~~~~~-~~aDvv 61 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVT-IWN----------RSPEKAEELAAL--------GAERAATPCEVV-ESCPVT 61 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSGGGGHHHHHT--------TCEECSSHHHHH-HHCSEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEE-EEc----------CCHHHHHHHHHC--------CCeecCCHHHHH-hcCCEE
Confidence 689999999999999999999999885 667 344445444443 223333233333 368999
Q ss_pred eccccccccccccc-------ccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh-------------
Q psy8194 305 IPAAIEDQITINNA-------NNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------- 361 (428)
Q Consensus 305 iPaA~~~~It~~na-------~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi------------- 361 (428)
+-|........+.+ +.+ +-++|+...+.+. +.+..+.+.++|+.++.-.+. ||..
T Consensus 62 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~--g~~~~a~~g~l~~~~gg 139 (287)
T 3pef_A 62 FAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVS--GSKKPAEDGTLIILAAG 139 (287)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CCHHHHHHTCEEEEEEE
T ss_pred EEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCc--CCHHHHhcCCEEEEEeC
Confidence 99887433222222 222 3457777766543 344557788899988632222 3321
Q ss_pred -hhHHHHHhhc----cc-CC----CCHHH----HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q psy8194 362 -VSYFEWVQNL----SN-LL----WTEQE----INLRLNNIICNAFDAIWELANTKKVSLRTAAFIIGC 416 (428)
Q Consensus 362 -~s~~E~~qn~----~~-~~----w~~e~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~a~ 416 (428)
-..++.++.+ .. .. ....+ ++.-+...+...+.+.+..+++.|+++.+..-.+..
T Consensus 140 ~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~ 208 (287)
T 3pef_A 140 DRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGA 208 (287)
T ss_dssp CHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 1122333221 10 00 11122 222333333457788899999999999887776653
No 45
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.36 E-value=0.0028 Score=64.63 Aligned_cols=109 Identities=10% Similarity=0.100 Sum_probs=71.8
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+ ....+.. .+.| .+...+.++++
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~-~~d~~-------~~~~~~~----~~~G-------~~~~~~l~ell- 245 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLH-YTDRH-------RLPESVE----KELN-------LTWHATREDMY- 245 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECSS-------CCCHHHH----HHHT-------CEECSSHHHHG-
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEE-EEcCC-------ccchhhH----hhcC-------ceecCCHHHHH-
Confidence 457899999999999999999999999999986 44532 2222211 1111 22222134555
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCC
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGI 347 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI 347 (428)
..|||++-|.. .+.|+++....++ -.+++.-+-+++ .. +..+.|++..|
T Consensus 246 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i 302 (393)
T 2nac_A 246 PVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRL 302 (393)
T ss_dssp GGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSE
T ss_pred hcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCe
Confidence 47999998865 3556666666664 467888888875 44 34577877654
No 46
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=97.34 E-value=0.0033 Score=60.58 Aligned_cols=168 Identities=15% Similarity=0.210 Sum_probs=99.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+|+.|.+.|.+|+ +.| .+.+++.++.+. +....++.++.+ .+||++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~-~~d----------~~~~~~~~~~~~--------g~~~~~~~~~~~-~~aDvv 63 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLN-VFD----------LVQSAVDGLVAA--------GASAARSARDAV-QGADVV 63 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHT--------TCEECSSHHHHH-TTCSEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEE-EEc----------CCHHHHHHHHHC--------CCeEcCCHHHHH-hCCCeE
Confidence 589999999999999999999999875 667 566676666554 123333233333 479999
Q ss_pred ecccccccccc-------cccccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchhh------------
Q psy8194 305 IPAAIEDQITI-------NNANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVIV------------ 362 (428)
Q Consensus 305 iPaA~~~~It~-------~na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi~------------ 362 (428)
|-|........ +-.+.+ +-++|+.-.+.+. +.+..+.+.++|+.++.- -+.|+...
T Consensus 64 i~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~--pv~~~~~~~~~g~l~~~~~g 141 (302)
T 2h78_A 64 ISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA--PVSGGTAGAAAGTLTFMVGG 141 (302)
T ss_dssp EECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC--CEESCHHHHHHTCEEEEEES
T ss_pred EEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE--EccCChhhHhcCCceEEeCC
Confidence 99886443222 222233 3457777666653 245567788889988743 33444321
Q ss_pred --hHHHHHhhc----cc-CC----CCHHH----HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 363 --SYFEWVQNL----SN-LL----WTEQE----INLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 363 --s~~E~~qn~----~~-~~----w~~e~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
..++.++.+ .. .. ....+ ++.-+...+...+.+.+..+++.++++.+....+
T Consensus 142 ~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 208 (302)
T 2h78_A 142 DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIM 208 (302)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 112222111 00 00 01111 2222333334467888888999999987765544
No 47
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.34 E-value=0.00057 Score=66.31 Aligned_cols=167 Identities=14% Similarity=0.149 Sum_probs=98.4
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
.++|.|+|+|++|..+|+.|.+.|.+|+ +.|. +.+++.+..+. +.+..++.+++.. ||+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~-~~dr----------~~~~~~~~~~~--------g~~~~~~~~~~~~--aDv 73 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVT-VYDI----------RIEAMTPLAEA--------GATLADSVADVAA--ADL 73 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEE-EECS----------STTTSHHHHHT--------TCEECSSHHHHTT--SSE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHHHHC--------CCEEcCCHHHHHh--CCE
Confidence 3689999999999999999999999875 6673 33333344332 2333333556665 999
Q ss_pred Eeccccccccccc----ccccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh--------------h
Q psy8194 304 LIPAAIEDQITIN----NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI--------------V 362 (428)
Q Consensus 304 liPaA~~~~It~~----na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi--------------~ 362 (428)
++-|........+ -.+.+ .-++|+...+.+. +.+..+.+.++|+.++.-.+. |+.. -
T Consensus 74 vi~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~--g~~~~a~~g~l~~~~gg~~ 151 (296)
T 3qha_A 74 IHITVLDDAQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVS--GGAAAAARGELATMVGADR 151 (296)
T ss_dssp EEECCSSHHHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEE--SCHHHHHHTCEEEEEECCH
T ss_pred EEEECCChHHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCc--CCHHHHhcCCccEEecCCH
Confidence 9998875432222 22223 3467777776653 345566788889987732221 2221 1
Q ss_pred hHHHHHhhcc----c-CC----CCHH----HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Q psy8194 363 SYFEWVQNLS----N-LL----WTEQ----EINLRLNNIICNAFDAIWELANTKKVSLRTAAFI 413 (428)
Q Consensus 363 s~~E~~qn~~----~-~~----w~~e----~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~ 413 (428)
..++.++.+- . .. ...- -++..+...+...+.+.+..+++.++++.+.+-+
T Consensus 152 ~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~ 215 (296)
T 3qha_A 152 EVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRV 215 (296)
T ss_dssp HHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhh
Confidence 1223322210 0 00 0111 2333344444556788999999999999988443
No 48
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.34 E-value=0.00035 Score=70.27 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=75.8
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 301 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~ 301 (428)
++.++|.|+|+|++|+.+|+.|.+.|..|+ +.| .+.+++.++.+. | ....++.+++. .+|
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~-v~d----------r~~~~~~~l~~~-g-------~~~~~s~~e~~-~~a 79 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECV-VYD----------LNVNAVQALERE-G-------IAGARSIEEFC-AKL 79 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHTT-T-------CBCCSSHHHHH-HHS
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHHC-C-------CEEeCCHHHHH-hcC
Confidence 467899999999999999999999999875 777 566777666543 1 22222233433 234
Q ss_pred ---eEEecccccccccccccc----cc-cceEEEecCCCCC--CHHHHHHHHHCCCceecccc
Q psy8194 302 ---DILIPAAIEDQITINNAN----NV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVI 354 (428)
Q Consensus 302 ---DIliPaA~~~~It~~na~----~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~l 354 (428)
|+++-|.... ...+.+. .+ .-.+|+...|.+. +.+..+.|.++|+.+++-.+
T Consensus 80 ~~~DvVi~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapV 141 (358)
T 4e21_A 80 VKPRVVWLMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGT 141 (358)
T ss_dssp CSSCEEEECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCCEEEEeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCC
Confidence 9999887665 3232222 23 3468999988874 45566788999999886444
No 49
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.33 E-value=0.0013 Score=68.68 Aligned_cols=106 Identities=14% Similarity=0.178 Sum_probs=70.9
Q ss_pred HHHHHHHHHH-HHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCC
Q psy8194 206 GVFIIGSKIA-SKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF 284 (428)
Q Consensus 206 Gv~~~~~~~~-~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~ 284 (428)
|...++...+ +..+..+.|++++|.|+|.+|+.+|+.|...|++|+ ++| .|...+.+.....
T Consensus 246 Gt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Vi-v~D----------~~~~~a~~Aa~~g------ 308 (488)
T 3ond_A 246 GCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVI-VTE----------IDPICALQATMEG------ 308 (488)
T ss_dssp HHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHTT------
T ss_pred cccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEc----------CCHHHHHHHHHhC------
Confidence 4444333333 446778999999999999999999999999999985 778 5666665554431
Q ss_pred CCceeccCCCcccccCceEEecccc-ccccccccccccc-ceEEEecCCC
Q psy8194 285 NEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANG 332 (428)
Q Consensus 285 ~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~-akiIvegAN~ 332 (428)
....+ .++++ ..+|+++.|.. .++|+.+....++ --+|+..++.
T Consensus 309 --~dv~~-lee~~-~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 309 --LQVLT-LEDVV-SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp --CEECC-GGGTT-TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred --CccCC-HHHHH-HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 22222 33443 36899998775 5677766555553 2355556554
No 50
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.32 E-value=0.0042 Score=60.50 Aligned_cols=122 Identities=15% Similarity=0.074 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
++|+..+++ +.+.++++++++|.|.|.+|+.++..|.+.|++-|.|+++ +.++..++.++..
T Consensus 106 ~~G~~~~L~----~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR----------t~~ka~~La~~~~---- 167 (282)
T 3fbt_A 106 YIGFGKMLS----KFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR----------NPEKTSEIYGEFK---- 167 (282)
T ss_dssp HHHHHHHHH----HTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES----------CHHHHHHHCTTSE----
T ss_pred HHHHHHHHH----HcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC----------CHHHHHHHHHhcC----
Confidence 667666654 4578899999999999999999999999999843457774 4555555543211
Q ss_pred CCCceeccCCCcccccCceEEeccccccccccc-----ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCcee
Q psy8194 284 FNEGEKINDSKEFWSIPCDILIPAAIEDQITIN-----NANNV-TAKIILEGANGPT-TTEADDILRDKGIILA 350 (428)
Q Consensus 284 ~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~-----na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~vi 350 (428)
...+++.++ + ++||+|-|+.-+.-... ....+ +..+|++-.-+|. |+= .+.-+++|..++
T Consensus 168 ---~~~~~~l~~-l--~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~l-l~~A~~~G~~~~ 234 (282)
T 3fbt_A 168 ---VISYDELSN-L--KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLF-LKYARESGVKAV 234 (282)
T ss_dssp ---EEEHHHHTT-C--CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCHH-HHHHHHTTCEEE
T ss_pred ---cccHHHHHh-c--cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCHH-HHHHHHCcCeEe
Confidence 111221223 3 89999988864432211 11112 3568999999996 553 344567898764
No 51
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.30 E-value=0.0017 Score=63.29 Aligned_cols=172 Identities=16% Similarity=0.170 Sum_probs=101.1
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCce
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 302 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~D 302 (428)
+-++|.|+|+|++|..+|+.|.+.|..|+ +.|. +.+++.++.+. +....++.++.+ .+||
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~-~~dr----------~~~~~~~l~~~--------g~~~~~~~~~~~-~~aD 79 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVT-VWNR----------TLSKCDELVEH--------GASVCESPAEVI-KKCK 79 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------SGGGGHHHHHT--------TCEECSSHHHHH-HHCS
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHHHHC--------CCeEcCCHHHHH-HhCC
Confidence 44789999999999999999999999875 6673 44444444432 233333233433 3689
Q ss_pred EEecccccccccccc-------cccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchhh----------
Q psy8194 303 ILIPAAIEDQITINN-------ANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVIV---------- 362 (428)
Q Consensus 303 IliPaA~~~~It~~n-------a~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi~---------- 362 (428)
++|-|........+. .+.+ .-++|+.-.+.+. +.+..+.+.++|+.++.-.+. |+...
T Consensus 80 vvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~--g~~~~a~~g~l~i~~ 157 (310)
T 3doj_A 80 YTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVS--GSKKPAEDGQLIILA 157 (310)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CCHHHHHHTCEEEEE
T ss_pred EEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCC--CChhHHhcCCeEEEE
Confidence 999887643222222 2233 3467887776553 345567788999988743332 33221
Q ss_pred ----hHHHHHhhc----cc----C-CCCHH----HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q psy8194 363 ----SYFEWVQNL----SN----L-LWTEQ----EINLRLNNIICNAFDAIWELANTKKVSLRTAAFIIGC 416 (428)
Q Consensus 363 ----s~~E~~qn~----~~----~-~w~~e----~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~a~ 416 (428)
..++.++.+ .. . ....- -+...+...+...+.+.+..+++.|+++.+...++..
T Consensus 158 gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~ 228 (310)
T 3doj_A 158 AGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDL 228 (310)
T ss_dssp EECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 122332221 00 0 01111 2223333344456788899999999999887766543
No 52
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.30 E-value=0.0016 Score=65.32 Aligned_cols=108 Identities=14% Similarity=0.158 Sum_probs=72.8
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+- -. ... ...| .+...+.++++.
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~-~~d~~~-------~~--~~~---~~~g-------~~~~~~l~ell~- 222 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVL-FYDPYL-------SD--GVE---RALG-------LQRVSTLQDLLF- 222 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECTTS-------CT--THH---HHHT-------CEECSSHHHHHH-
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EECCCc-------ch--hhH---hhcC-------CeecCCHHHHHh-
Confidence 36899999999999999999999999999986 455321 11 111 1111 222221445554
Q ss_pred CceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc
Q psy8194 300 PCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~ 348 (428)
.|||++.|.. .+.|+.+....++ -.+++.-+.+++ +.+ ..+.|++++|.
T Consensus 223 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 279 (347)
T 1mx3_A 223 HSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIR 279 (347)
T ss_dssp HCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred cCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCc
Confidence 7999988764 3456666666664 358888888885 444 46788888765
No 53
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.21 E-value=0.0044 Score=64.31 Aligned_cols=174 Identities=14% Similarity=0.129 Sum_probs=106.5
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc--Cc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI--PC 301 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~--~~ 301 (428)
.++|.|+|+|++|+.+|+.|.+.|.+| .+.| .+.+++.+..++.+. .+....++.+++... +|
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V-~v~d----------r~~~~~~~l~~~~~~----~gi~~~~s~~e~v~~l~~a 69 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTV-AIYN----------RTTSKTEEVFKEHQD----KNLVFTKTLEEFVGSLEKP 69 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCE-EEEC----------SSHHHHHHHHHHTTT----SCEEECSSHHHHHHTBCSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEE-EEEc----------CCHHHHHHHHHhCcC----CCeEEeCCHHHHHhhccCC
Confidence 368999999999999999999999987 4777 466677666654320 122222324444432 59
Q ss_pred eEEeccccccccccccc----cccc-ceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh-------------
Q psy8194 302 DILIPAAIEDQITINNA----NNVT-AKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------- 361 (428)
Q Consensus 302 DIliPaA~~~~It~~na----~~l~-akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi------------- 361 (428)
|+++-|...+....+.+ +.++ -++|+..+|+.. +.+..+.+.++|+.++.- .++||..
T Consensus 70 DvVilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~--pv~gg~~~a~~g~~i~~gg~ 147 (474)
T 2iz1_A 70 RRIMLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGT--GVSGGEKGALLGPSMMPGGQ 147 (474)
T ss_dssp CEEEECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEE--EECSHHHHHHHCCCEEEEEC
T ss_pred CEEEEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECC--CCCCChhhhccCCeEEecCC
Confidence 99999887653322222 3332 468999998863 344456677789887743 2233321
Q ss_pred hhHHHHHh----hccc---------CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHH
Q psy8194 362 VSYFEWVQ----NLSN---------LLWT--------EQEINLRLNNIICNAFDAIWELANT-KKVSLRTAAFII 414 (428)
Q Consensus 362 ~s~~E~~q----n~~~---------~~w~--------~e~v~~~l~~~m~~~~~~v~~~a~~-~~~~~r~aA~~~ 414 (428)
-..++.++ .... ..|- ..-++..+...+...+.+.+..+++ .|+++.++..++
T Consensus 148 ~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~ 222 (474)
T 2iz1_A 148 KEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIF 222 (474)
T ss_dssp HHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 11233332 2111 1221 1234445566666788888889999 799987766554
No 54
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.20 E-value=0.0012 Score=65.39 Aligned_cols=108 Identities=13% Similarity=0.178 Sum_probs=69.1
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+. -..+.. .+. +....+ .++++ .
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~-------~~~~~~----~~~-------g~~~~~-l~e~l-~ 209 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRF-LYTGRQ-------PRPEEA----AEF-------QAEFVS-TPELA-A 209 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEE-EEESSS-------CCHHHH----HTT-------TCEECC-HHHHH-H
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCC-------cchhHH----Hhc-------CceeCC-HHHHH-h
Confidence 46889999999999999999999999999986 455321 112221 111 122222 34444 4
Q ss_pred CceEEecccccc-----ccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc
Q psy8194 300 PCDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~~~-----~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~ 348 (428)
+||+++.|...+ .|+.+....++ -.+++.-+.+++ +. +..+.|.+.+|.
T Consensus 210 ~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 210 QSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCcc
Confidence 899999988654 34433334443 357778888774 43 446778886653
No 55
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.20 E-value=0.0044 Score=64.74 Aligned_cols=176 Identities=15% Similarity=0.159 Sum_probs=112.6
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc--C
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI--P 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~--~ 300 (428)
..++|.|+|+|++|..+|+.|.+.|.+|+ +.| .+.+++.++.++... +. .....++.+++... +
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~-v~d----------r~~~~~~~l~~~g~~--g~-~i~~~~s~~e~v~~l~~ 68 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVC-AFN----------RTVSKVDDFLANEAK--GT-KVVGAQSLKEMVSKLKK 68 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSTHHHHHHHHTTTT--TS-SCEECSSHHHHHHTBCS
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHhcccC--CC-ceeccCCHHHHHhhccC
Confidence 34689999999999999999999999885 677 456666666554210 00 01111224445432 6
Q ss_pred ceEEecccccccccccc----cccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh------------
Q psy8194 301 CDILIPAAIEDQITINN----ANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------ 361 (428)
Q Consensus 301 ~DIliPaA~~~~It~~n----a~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi------------ 361 (428)
||+++-|-..+....+. ++.+ +-++|+...|... |.+..+.|.++|+.++.-.++ ||..
T Consensus 69 aDvVil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVs--Gg~~gA~~G~~im~GG 146 (484)
T 4gwg_A 69 PRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVS--GGEEGARYGPSLMPGG 146 (484)
T ss_dssp SCEEEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE--SHHHHHHHCCEEEEEE
T ss_pred CCEEEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCcc--CCHHHHhcCCeeecCC
Confidence 99999887765333332 3333 4579999999884 455567789999988754332 3331
Q ss_pred -hhHHHHHhhc----cc-C-------CCC--------HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHH
Q psy8194 362 -VSYFEWVQNL----SN-L-------LWT--------EQEINLRLNNIICNAFDAIWELANT-KKVSLRTAAFII 414 (428)
Q Consensus 362 -~s~~E~~qn~----~~-~-------~w~--------~e~v~~~l~~~m~~~~~~v~~~a~~-~~~~~r~aA~~~ 414 (428)
-..+|.++.+ .. . .|- ..-++.-++..+...+.+.+..+++ .|+++.+.+.++
T Consensus 147 ~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~ 221 (484)
T 4gwg_A 147 NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAF 221 (484)
T ss_dssp CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 1223333221 11 1 121 2346667777788899999999999 999998877665
No 56
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.19 E-value=0.0018 Score=65.29 Aligned_cols=114 Identities=18% Similarity=0.192 Sum_probs=74.4
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.| +. .+.+... +. +.+..+ .++++
T Consensus 171 ~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~-~~d-------~~-~~~~~~~----~~-------g~~~~~-l~ell- 228 (365)
T 4hy3_A 171 ARLIAGSEIGIVGFGDLGKALRRVLSGFRARIR-VFD-------PW-LPRSMLE----EN-------GVEPAS-LEDVL- 228 (365)
T ss_dssp CCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEE-EEC-------SS-SCHHHHH----HT-------TCEECC-HHHHH-
T ss_pred ccccCCCEEEEecCCcccHHHHHhhhhCCCEEE-EEC-------CC-CCHHHHh----hc-------CeeeCC-HHHHH-
Confidence 457899999999999999999999999999986 444 33 2322211 11 122223 44555
Q ss_pred cCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCceecccc
Q psy8194 299 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGIILAPDVI 354 (428)
Q Consensus 299 ~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~viPD~l 354 (428)
..|||++-|... +.|+.+....++ -.+++.-+-+++ ..+ ..+.|++..|...=|++
T Consensus 229 ~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~ 292 (365)
T 4hy3_A 229 TKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVY 292 (365)
T ss_dssp HSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCC
T ss_pred hcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCC
Confidence 479999977653 456666666553 458888888885 443 45788877665433443
No 57
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.19 E-value=0.0015 Score=65.45 Aligned_cols=108 Identities=15% Similarity=0.207 Sum_probs=73.5
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
|.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|. ...+.+.. . +.+..++.++++
T Consensus 168 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~~dr-------~~~~~~~~-----~--------g~~~~~~l~ell- 225 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRIGRAIATRARGFGLAIH-YHNR-------TRLSHALE-----E--------GAIYHDTLDSLL- 225 (345)
T ss_dssp BCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEE-EECS-------SCCCHHHH-----T--------TCEECSSHHHHH-
T ss_pred ccccCCCEEEEEEeChhHHHHHHHHHHCCCEEE-EECC-------CCcchhhh-----c--------CCeEeCCHHHHH-
Confidence 457899999999999999999999999999986 4443 33332211 1 123332244555
Q ss_pred cCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHHH-HHHHHHCCCc
Q psy8194 299 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTEA-DDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~ea-~~iL~~rGI~ 348 (428)
.+|||++-|..- +.|+.+....++ -.+++.-+-+++ ..+| .+.|++..|.
T Consensus 226 ~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 283 (345)
T 4g2n_A 226 GASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLF 283 (345)
T ss_dssp HTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCce
Confidence 379999987753 556666555553 468999999996 4443 5778776654
No 58
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.18 E-value=0.00059 Score=67.86 Aligned_cols=107 Identities=16% Similarity=0.239 Sum_probs=70.0
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+. +.+.. .+.| ....+ .++++ .
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~d~~~--------~~~~~----~~~g-------~~~~~-l~e~l-~ 199 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLY-YWSRHR--------KVNVE----KELK-------ARYMD-IDELL-E 199 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECSSC--------CHHHH----HHHT-------EEECC-HHHHH-H
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCCc--------chhhh----hhcC-------ceecC-HHHHH-h
Confidence 57899999999999999999999999999985 556431 11111 1111 22222 34444 3
Q ss_pred CceEEecccccc-----cccccccccccceEEEecCCCCC-CHHH-HHHHHHCCCc
Q psy8194 300 PCDILIPAAIED-----QITINNANNVTAKIILEGANGPT-TTEA-DDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~~~-----~It~~na~~l~akiIvegAN~p~-t~ea-~~iL~~rGI~ 348 (428)
+||+++.|...+ .|+.+....++..+++.-+.+++ +.++ .+.|.++.|.
T Consensus 200 ~aDiVil~vp~~~~t~~~i~~~~~~~mk~gilin~srg~~vd~~aL~~aL~~~~i~ 255 (333)
T 2d0i_A 200 KSDIVILALPLTRDTYHIINEERVKKLEGKYLVNIGRGALVDEKAVTEAIKQGKLK 255 (333)
T ss_dssp HCSEEEECCCCCTTTTTSBCHHHHHHTBTCEEEECSCGGGBCHHHHHHHHHTTCBC
T ss_pred hCCEEEEcCCCChHHHHHhCHHHHhhCCCCEEEECCCCcccCHHHHHHHHHcCCce
Confidence 899999998765 44443344443228888888886 4433 4778776554
No 59
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.17 E-value=0.00072 Score=68.85 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCC--CCCHHHHHHHHHhcCC
Q psy8194 203 TGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPN--GFNIPKLQKYVTFTRS 280 (428)
Q Consensus 203 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~--GlD~~~l~~~~~~~g~ 280 (428)
|+-=+..++-.+++-.|.++++.||+|.|.|.+|.++|++|...|++=|-++|++|-++... .|+. +.+...+...
T Consensus 167 Ta~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~--~k~~fa~~~~ 244 (398)
T 2a9f_A 167 TAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAP--HHLDIAKVTN 244 (398)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC-----CHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchH--HHHHHhhccC
Confidence 44444456666777678899999999999999999999999999994446999999998754 3543 2222211100
Q ss_pred CcCCCCceeccCCCcccccCceEEecccccccccccccccc-cceEEEecCCCCC
Q psy8194 281 IKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNV-TAKIILEGANGPT 334 (428)
Q Consensus 281 l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na~~l-~akiIvegAN~p~ 334 (428)
.+ ....+ .++.+. .+||||=++.++.+|++-+.+. +=.||..-+| |+
T Consensus 245 --~~--~~~~~-L~eav~-~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsN-Pt 292 (398)
T 2a9f_A 245 --RE--FKSGT-LEDALE-GADIFIGVSAPGVLKAEWISKMAARPVIFAMAN-PI 292 (398)
T ss_dssp --CT--TCCCS-CSHHHH-TTCSEEECCSTTCCCHHHHHTSCSSCEEEECCS-SS
T ss_pred --cc--cchhh-HHHHhc-cCCEEEecCCCCCCCHHHHHhhCCCCEEEECCC-CC
Confidence 01 01111 233333 4799999999999999988888 4468888888 54
No 60
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=97.16 E-value=0.0015 Score=64.79 Aligned_cols=115 Identities=14% Similarity=0.213 Sum_probs=74.8
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+||.|+|+|++|+.+|+.|...|.+|++ .|.+..- .+++ .......+.++++
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~-~dr~~~~--~~~~------------------~~~~~~~~l~ell- 189 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIG-VNTTGHP--ADHF------------------HETVAFTATADAL- 189 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-EESSCCC--CTTC------------------SEEEEGGGCHHHH-
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCCEEEE-ECCCcch--hHhH------------------hhccccCCHHHHH-
Confidence 4578999999999999999999999999999974 4432110 0111 0011112144555
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc-eeccccc
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII-LAPDVIT 355 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~-viPD~la 355 (428)
.+|||++-|.. .+.|+.+....++ -.+++.-+-+++ ..+ ..+.|++..|. ..=|+..
T Consensus 190 ~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~ 255 (324)
T 3evt_A 190 ATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTE 255 (324)
T ss_dssp HHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCS
T ss_pred hhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCC
Confidence 37999998765 4556666666664 358888888885 444 35788887764 3344443
No 61
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.14 E-value=0.0034 Score=61.02 Aligned_cols=129 Identities=12% Similarity=0.042 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
+.|...+++. .+.++++++++|.|.|.+|+.++..|.+.|++-|.|.++ +.++..++.++.+..
T Consensus 111 ~~G~~~~l~~----~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R----------~~~~a~~la~~~~~~-- 174 (283)
T 3jyo_A 111 VSGFGRGMEE----GLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADL----------DTSRAQALADVINNA-- 174 (283)
T ss_dssp HHHHHHHHHH----HCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------SHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHH----hCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEEC----------CHHHHHHHHHHHHhh--
Confidence 6777666653 466899999999999999999999999999953457874 455555544322100
Q ss_pred CCC--ceeccCCCcccc--cCceEEeccccccccccc----ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCcee
Q psy8194 284 FNE--GEKINDSKEFWS--IPCDILIPAAIEDQITIN----NANNV-TAKIILEGANGPT-TTEADDILRDKGIILA 350 (428)
Q Consensus 284 ~~~--~~~i~~~~~il~--~~~DIliPaA~~~~It~~----na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~vi 350 (428)
+++ ....+ .+++-+ .++||+|-|+.-+.-... ....+ +..+|.+-.-+|. |+=. +.-+++|..++
T Consensus 175 ~~~~~i~~~~-~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll-~~A~~~G~~~~ 249 (283)
T 3jyo_A 175 VGREAVVGVD-ARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELL-KAARALGCETL 249 (283)
T ss_dssp HTSCCEEEEC-STTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSCHHH-HHHHHHTCCEE
T ss_pred cCCceEEEcC-HHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCCHHH-HHHHHCcCeEe
Confidence 111 11222 223322 378999988864322111 11223 3568999999996 6643 33457787664
No 62
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.13 E-value=0.0018 Score=62.12 Aligned_cols=170 Identities=13% Similarity=0.132 Sum_probs=99.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+|+.|.+.|.+|+ +.|. +.+++.+..+. +....++.++.+ .+||++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~-~~dr----------~~~~~~~~~~~--------g~~~~~~~~~~~-~~advv 61 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVT-VWNR----------NPAKCAPLVAL--------GARQASSPAEVC-AACDIT 61 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEE-EECS----------SGGGGHHHHHH--------TCEECSCHHHHH-HHCSEE
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEE-EEcC----------CHHHHHHHHHC--------CCeecCCHHHHH-HcCCEE
Confidence 479999999999999999999999875 6673 44444444433 123333233333 478999
Q ss_pred eccccccccccc-------ccccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh-------------
Q psy8194 305 IPAAIEDQITIN-------NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------- 361 (428)
Q Consensus 305 iPaA~~~~It~~-------na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi------------- 361 (428)
+-|........+ -.+.+ +-++|+...+.+. +.+..+.+.++|+.++.-.+. |+..
T Consensus 62 i~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~--g~~~~a~~g~l~~~~gg 139 (287)
T 3pdu_A 62 IAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVS--GTKKPAEDGTLIILAAG 139 (287)
T ss_dssp EECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CCHHHHHHTCEEEEEEE
T ss_pred EEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCcc--CCHHHHhcCCEEEEEeC
Confidence 998876522222 22333 3467777776543 234556788899987633222 3321
Q ss_pred -hhHHHHHhhcc----c-CC----CCHH----HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q psy8194 362 -VSYFEWVQNLS----N-LL----WTEQ----EINLRLNNIICNAFDAIWELANTKKVSLRTAAFIIGC 416 (428)
Q Consensus 362 -~s~~E~~qn~~----~-~~----w~~e----~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~a~ 416 (428)
-..+|.++.+- . .. ...- -+...+...+...+.+.+..+++.|+++.+...++..
T Consensus 140 ~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 140 DQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 11223322210 0 00 0111 2233334444566788889999999999888776554
No 63
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.12 E-value=0.0061 Score=63.40 Aligned_cols=178 Identities=12% Similarity=0.124 Sum_probs=105.6
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc--Cce
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI--PCD 302 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~--~~D 302 (428)
++|.|+|.|++|+.+|+.|.+.|..| .+.| .+.+++.+..++.|....-.+....++.+++... +||
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V-~v~d----------r~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aD 70 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKV-AVFN----------RTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPR 70 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEEC----------SSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEE-EEEe----------CCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCC
Confidence 47999999999999999999999987 4777 4666776666543311000011222223444432 699
Q ss_pred EEeccccccccccccccc----c-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh-------------h
Q psy8194 303 ILIPAAIEDQITINNANN----V-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI-------------V 362 (428)
Q Consensus 303 IliPaA~~~~It~~na~~----l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi-------------~ 362 (428)
+++-|.....-..+.+.. + .-++|+...|+.. +.+..+.+.++|+.++.-. ..||.. -
T Consensus 71 vVilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~p--v~gg~~~a~~g~~i~~gg~~ 148 (478)
T 1pgj_A 71 KALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMG--ISGGEEGARKGPAFFPGGTL 148 (478)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEE--EESHHHHHHHCCEEEEEECH
T ss_pred EEEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEee--ccCCHHHHhcCCeEeccCCH
Confidence 999988765332333322 3 2468999999874 3445567888898776422 223221 1
Q ss_pred hHHHHHhh----ccc--------CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q psy8194 363 SYFEWVQN----LSN--------LLWT--------EQEINLRLNNIICNAFDAIWELANTKKVSLRTAAFIIG 415 (428)
Q Consensus 363 s~~E~~qn----~~~--------~~w~--------~e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~a 415 (428)
..++.++. ... ..|- ..-+...+...+...+.+.+..+++.|+++.+...++.
T Consensus 149 ~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 149 SVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp HHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 12333322 111 1121 11233445555567788888999999999887665553
No 64
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.11 E-value=0.0069 Score=58.43 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=80.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCC
Q psy8194 202 ATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSI 281 (428)
Q Consensus 202 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l 281 (428)
-++.|+..+++. .+.++++++++|.|.|.+|+.+|+.|.+.| +|+ |+|+ +.+++.+..++.+..
T Consensus 110 Td~~G~~~~L~~----~~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~-v~~r----------~~~~~~~l~~~~~~~ 173 (287)
T 1nvt_A 110 TDGIGARMALEE----EIGRVKDKNIVIYGAGGAARAVAFELAKDN-NII-IANR----------TVEKAEALAKEIAEK 173 (287)
T ss_dssp CHHHHHHHHHHH----HHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEE-EECS----------SHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH----hCCCcCCCEEEEECchHHHHHHHHHHHHCC-CEE-EEEC----------CHHHHHHHHHHHhhh
Confidence 378888877764 466889999999999999999999999999 874 7774 445544443321100
Q ss_pred cCCC---CceeccCCCcccccCceEEecccccccccc---c---ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCcee
Q psy8194 282 KDFN---EGEKINDSKEFWSIPCDILIPAAIEDQITI---N---NANNV-TAKIILEGANGPT-TTEADDILRDKGIILA 350 (428)
Q Consensus 282 ~~~~---~~~~i~~~~~il~~~~DIliPaA~~~~It~---~---na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~vi 350 (428)
.... ... +.+..+.+ .++||+|-|+.-..... . ....+ ...+|++-.-+|. |+ ..+..+++|+.++
T Consensus 174 ~~~~~~~~~d-~~~~~~~~-~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~t~-ll~~a~~~G~~~~ 250 (287)
T 1nvt_A 174 LNKKFGEEVK-FSGLDVDL-DGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETV-LLKEAKKVNAKTI 250 (287)
T ss_dssp HTCCHHHHEE-EECTTCCC-TTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSCH-HHHHHHTTTCEEE
T ss_pred cccccceeEE-EeeHHHhh-CCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCccCH-HHHHHHHCCCEEe
Confidence 0000 001 11112222 37899999986443210 0 12234 3467888877775 55 3345677898754
Q ss_pred c
Q psy8194 351 P 351 (428)
Q Consensus 351 P 351 (428)
+
T Consensus 251 ~ 251 (287)
T 1nvt_A 251 N 251 (287)
T ss_dssp C
T ss_pred C
Confidence 3
No 65
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.10 E-value=0.0014 Score=65.40 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=72.5
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|.+ . + .... +. +.+..+ .++++
T Consensus 136 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~-~~d~~-------~-~--~~~~---~~-------g~~~~~-l~ell- 192 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVL-CYDVV-------K-R--EDLK---EK-------GCVYTS-LDELL- 192 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS-------C-C--HHHH---HT-------TCEECC-HHHHH-
T ss_pred ceeccCceEEEECcCHHHHHHHHHHHHCcCEEE-EECCC-------c-c--hhhH---hc-------CceecC-HHHHH-
Confidence 346899999999999999999999999999986 45532 1 1 1111 11 123333 44555
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~ 348 (428)
.+|||++-|.. .+.|+.+....++ -.+++.-+-+++ ..+ ..+.|++..|.
T Consensus 193 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 193 KESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred hhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 37999998764 3466666666664 468888888885 444 45778777664
No 66
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.08 E-value=0.002 Score=63.23 Aligned_cols=113 Identities=19% Similarity=0.179 Sum_probs=73.6
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
....++|.|+|.|++|+..++.|.+. |.+-|.|.| .+.++..++.++.+. .....++.++.+ .
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~d----------r~~~~~~~l~~~~~~-----~~~~~~~~~e~v-~ 195 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWN----------RTKENAEKFADTVQG-----EVRVCSSVQEAV-A 195 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEEC----------SSHHHHHHHHHHSSS-----CCEECSSHHHHH-T
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEc----------CCHHHHHHHHHHhhC-----CeEEeCCHHHHH-h
Confidence 45678999999999999999998775 874556888 567777777665331 122223233444 3
Q ss_pred CceEEeccccc--cccccccccccc-ceEEEe-cCCCCCCHHHHHHHHHCCCceecc
Q psy8194 300 PCDILIPAAIE--DQITINNANNVT-AKIILE-GANGPTTTEADDILRDKGIILAPD 352 (428)
Q Consensus 300 ~~DIliPaA~~--~~It~~na~~l~-akiIve-gAN~p~t~ea~~iL~~rGI~viPD 352 (428)
+|||++-|... .++.. +.++ -++|+. +.+.|-..+..+.+.++|+.++-+
T Consensus 196 ~aDiVi~atp~~~~v~~~---~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~ 249 (312)
T 2i99_A 196 GADVIITVTLATEPILFG---EWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDS 249 (312)
T ss_dssp TCSEEEECCCCSSCCBCG---GGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEESC
T ss_pred cCCEEEEEeCCCCcccCH---HHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEECC
Confidence 68999988752 22322 2232 234544 788886666666777889866643
No 67
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.07 E-value=0.00084 Score=63.54 Aligned_cols=95 Identities=15% Similarity=0.215 Sum_probs=66.3
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
++.+++|.|+|+|++|+.+++.|.+.|..+|.+.| .+.+.+.+..++.+ ....++.++.+. +
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~----------~~~~~~~~~~~~~g-------~~~~~~~~~~~~-~ 68 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYS----------RTEESARELAQKVE-------AEYTTDLAEVNP-Y 68 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEEC----------SSHHHHHHHHHHTT-------CEEESCGGGSCS-C
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEe----------CCHHHHHHHHHHcC-------CceeCCHHHHhc-C
Confidence 45568999999999999999999999998677888 46666666655432 222332444443 7
Q ss_pred ceEEecccccccccccccccc-----cceEEEecCCCCC
Q psy8194 301 CDILIPAAIEDQITINNANNV-----TAKIILEGANGPT 334 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l-----~akiIvegAN~p~ 334 (428)
||+++-|.....+ .+.+..+ .-++|+..+|+..
T Consensus 69 ~Dvvi~av~~~~~-~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 69 AKLYIVSLKDSAF-AELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CSEEEECCCHHHH-HHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred CCEEEEecCHHHH-HHHHHHHHhhcCCCcEEEECCCCCc
Confidence 9999999887654 3333332 3468888888754
No 68
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.07 E-value=0.0046 Score=61.15 Aligned_cols=133 Identities=19% Similarity=0.170 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
+.|...+++ ..+.++++++++|.|.|.+|+.++..|.+.|++-|.|.+++. -+.++..++.++.+...+
T Consensus 138 ~~Gf~~~L~----~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~-------~~~~~a~~la~~~~~~~~ 206 (315)
T 3tnl_A 138 GTGYMRALK----EAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD-------DFYANAEKTVEKINSKTD 206 (315)
T ss_dssp HHHHHHHHH----HTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS-------TTHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHH----HcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC-------chHHHHHHHHHHhhhhcC
Confidence 677766664 467899999999999999999999999999994335777431 125565555443211000
Q ss_pred CCCceeccCCCc---ccc--cCceEEecccccccccc---c---ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCcee
Q psy8194 284 FNEGEKINDSKE---FWS--IPCDILIPAAIEDQITI---N---NANNV-TAKIILEGANGPT-TTEADDILRDKGIILA 350 (428)
Q Consensus 284 ~~~~~~i~~~~~---il~--~~~DIliPaA~~~~It~---~---na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~vi 350 (428)
. ....++ .++ +-+ .++||+|-|+.-+.-.. . ....+ +..+|++-.-+|. |+= .+.-+++|..++
T Consensus 207 ~-~~~~~~-~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~l-l~~A~~~G~~~~ 283 (315)
T 3tnl_A 207 C-KAQLFD-IEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRL-LEIAEEQGCQTL 283 (315)
T ss_dssp C-EEEEEE-TTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCHH-HHHHHHTTCEEE
T ss_pred C-ceEEec-cchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCHH-HHHHHHCCCeEe
Confidence 0 011222 111 211 37999998876433211 1 12223 3468899999996 653 344467898664
No 69
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.06 E-value=0.0005 Score=68.34 Aligned_cols=172 Identities=18% Similarity=0.172 Sum_probs=99.0
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC--------CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA--------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK 294 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~--------GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~ 294 (428)
+-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++.....+. +|.+...+.... +.+..+.. ... |.+
T Consensus 5 ~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~-~~~-d~~ 80 (331)
T 3c8m_A 5 KTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER-IDIGKVISYKEK-GSLDSLEY-ESI-SAS 80 (331)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT-CCHHHHHHHHHT-TCGGGCCS-EEC-CHH
T ss_pred cEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc-cChHHHhhhhcc-CCcccccC-CCC-CHH
Confidence 347899999999999999998764 479999999988777765 777665544332 22211110 001 255
Q ss_pred cccccCceEEecccccc---ccccccccc-c--cceEEEecCCC-CCCHHHH---HHHHHCCCceeccccccccc---hh
Q psy8194 295 EFWSIPCDILIPAAIED---QITINNANN-V--TAKIILEGANG-PTTTEAD---DILRDKGIILAPDVITNAGG---VI 361 (428)
Q Consensus 295 ~il~~~~DIliPaA~~~---~It~~na~~-l--~akiIvegAN~-p~t~ea~---~iL~~rGI~viPD~laNaGG---Vi 361 (428)
++++.+.||++.|+..+ ....+.+.+ + ...+|++ |- |+..++. +.-+++|+.+.-+ ++.|| ++
T Consensus 81 ~ll~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvta--nK~pla~~~~eL~~~A~~~gv~~~~e--a~vg~giPii 156 (331)
T 3c8m_A 81 EALARDFDIVVDATPASADGKKELAFYKETFENGKDVVTA--NKSGLANFWPEIMEYARSNNRRIRYE--ATVAGGVPLF 156 (331)
T ss_dssp HHHHSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEECG--GGSSTTSCCH
T ss_pred HHhCCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEec--CchhhHHHHHHHHHHHHHcCCEEEEE--eecccccHHH
Confidence 66666899999999875 122222222 2 2334442 32 4443443 4456789876533 33333 34
Q ss_pred hhHHHHHhhcccCC-----C--CHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy8194 362 VSYFEWVQNLSNLL-----W--TEQEINLRLNNIICNAFDAIWELANTKKV 405 (428)
Q Consensus 362 ~s~~E~~qn~~~~~-----w--~~e~v~~~l~~~m~~~~~~v~~~a~~~~~ 405 (428)
...-+++... ... + +..-+..++++ ...|.+++..|++.|.
T Consensus 157 ~~l~~~l~g~-~I~~I~GI~nGT~nyil~~m~~--g~~f~~~l~eAq~~Gy 204 (331)
T 3c8m_A 157 SFIDYSVLPS-RIKKFRGIVSLTINYFIRELAN--KREFDDVLSEATKLGI 204 (331)
T ss_dssp HHHHHHSTTC-CCCEEEEECCHHHHHHHHHHHT--TCCHHHHHHHHHHHTS
T ss_pred HHHHHHhhcC-cccEEEEEEeccceeEecchhc--CCCHHHHHHHHHHcCC
Confidence 4444554310 010 1 12334445532 2478889999998764
No 70
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.04 E-value=0.0018 Score=64.57 Aligned_cols=108 Identities=15% Similarity=0.172 Sum_probs=71.3
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+ .+.. . ..+.| .+..+ .++++
T Consensus 160 ~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~-~~d~~--------~~~~---~-~~~~g-------~~~~~-l~ell- 217 (335)
T 2g76_A 160 GTELNGKTLGILGLGRIGREVATRMQSFGMKTI-GYDPI--------ISPE---V-SASFG-------VQQLP-LEEIW- 217 (335)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSS--------SCHH---H-HHHTT-------CEECC-HHHHG-
T ss_pred CcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEE-EECCC--------cchh---h-hhhcC-------ceeCC-HHHHH-
Confidence 347899999999999999999999999999986 44532 1221 1 11221 22223 44555
Q ss_pred cCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc
Q psy8194 299 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~ 348 (428)
.+||+++-|... +.|+.+....++ -.+++.-+-+++ .. +..+.|++..|.
T Consensus 218 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 218 PLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp GGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred hcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 379999988653 445555556664 457788777775 43 346778887653
No 71
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.04 E-value=0.0022 Score=64.09 Aligned_cols=105 Identities=13% Similarity=0.143 Sum_probs=60.3
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|.+.. . .. +.....+.++++
T Consensus 166 ~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~-~~dr~~~-------~---------~~-------~~~~~~sl~ell- 220 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQIGRALASRAEAFGMSVR-YWNRSTL-------S---------GV-------DWIAHQSPVDLA- 220 (340)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSSCC-------T---------TS-------CCEECSSHHHHH-
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcCCcc-------c---------cc-------CceecCCHHHHH-
Confidence 457899999999999999999999999999986 5564210 0 00 112222134444
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-C-HHHHHHHHHCCCc
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t-~ea~~iL~~rGI~ 348 (428)
.+||+++-|.. .+.|+.+....++ -.+++..+.+++ . .+..+.|++..|.
T Consensus 221 ~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~ 278 (340)
T 4dgs_A 221 RDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIA 278 (340)
T ss_dssp HTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSS
T ss_pred hcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCce
Confidence 47899988875 3455555555553 458888888886 3 3345678777664
No 72
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=97.03 E-value=0.0026 Score=67.05 Aligned_cols=107 Identities=17% Similarity=0.215 Sum_probs=70.2
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
|.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+ . +.+.. .+.| ....+ .++++
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~-~~d~~-------~-~~~~a----~~~g-------~~~~~-l~e~~- 194 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVV-AYDPY-------V-SPARA----AQLG-------IELLS-LDDLL- 194 (529)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECTT-------S-CHHHH----HHHT-------CEECC-HHHHH-
T ss_pred ccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EECCC-------C-ChhHH----HhcC-------cEEcC-HHHHH-
Confidence 346899999999999999999999999999986 44532 1 32221 1222 22223 44444
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CHHH-HHHHHHCCC
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TTEA-DDILRDKGI 347 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~ea-~~iL~~rGI 347 (428)
.+||+++-|.. .+.|+.+..+.++ -.+|+.-+-+++ +.++ .+.|.+..|
T Consensus 195 ~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i 251 (529)
T 1ygy_A 195 ARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV 251 (529)
T ss_dssp HHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSE
T ss_pred hcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCc
Confidence 37999999865 3456554555553 468888887776 4333 367777544
No 73
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.02 E-value=0.0012 Score=64.89 Aligned_cols=107 Identities=19% Similarity=0.269 Sum_probs=70.1
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+ .+.+ ...+.| .+..+ .++++.
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~--------~~~~----~~~~~g-------~~~~~-l~ell~- 195 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNIL-LYDPY--------PNEE----RAKEVN-------GKFVD-LETLLK- 195 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS--------CCHH----HHHHTT-------CEECC-HHHHHH-
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEE-EECCC--------CChh----hHhhcC-------ccccC-HHHHHh-
Confidence 46899999999999999999999999999986 55542 1221 111222 22223 445553
Q ss_pred CceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc
Q psy8194 300 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~ 348 (428)
+||+++.|... +.|+++....++ -.+++.-+-+++ ..+ ..+.|++..|.
T Consensus 196 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 196 ESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 79999988753 445555555553 357777777765 443 36788887653
No 74
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=97.01 E-value=0.0014 Score=65.01 Aligned_cols=108 Identities=14% Similarity=0.197 Sum_probs=71.5
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|.+.. ...+ +.......+.++++
T Consensus 135 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~dr~~~--~~~~------------------~~~~~~~~~l~ell- 192 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVL-GVSRSGR--ERAG------------------FDQVYQLPALNKML- 192 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC--CCTT------------------CSEEECGGGHHHHH-
T ss_pred CcccccceEEEEEECHHHHHHHHHHHhCCCEEE-EEcCChH--Hhhh------------------hhcccccCCHHHHH-
Confidence 347899999999999999999999999999986 4453320 0000 10011111133444
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~ 348 (428)
.+|||++-|.. .+.|+.+....++ -.+++.-+-+++ .. +..+.|+++.|.
T Consensus 193 ~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 250 (324)
T 3hg7_A 193 AQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLG 250 (324)
T ss_dssp HTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSS
T ss_pred hhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCce
Confidence 47999988765 4566666666664 468888888885 44 345788887763
No 75
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.99 E-value=0.002 Score=67.59 Aligned_cols=107 Identities=12% Similarity=0.087 Sum_probs=73.0
Q ss_pred HhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcc
Q psy8194 217 KINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 296 (428)
Q Consensus 217 ~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~i 296 (428)
..+.++.|++|.|+|+|.||+.+|+.|...|++|+ +.| .++....+.... +.+..+ .+++
T Consensus 270 ~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~-v~d----------~~~~~~~~a~~~--------G~~~~~-l~el 329 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVW-VTE----------IDPICALQAAME--------GYRVVT-MEYA 329 (494)
T ss_dssp HHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC----------SCHHHHHHHHTT--------TCEECC-HHHH
T ss_pred ccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEe----------CChHhHHHHHHc--------CCEeCC-HHHH
Confidence 35778999999999999999999999999999986 666 344443222211 223323 4455
Q ss_pred cccCceEEeccc-cccccccccccccc-ceEEEecCCCCC--CHHHHHHHHH
Q psy8194 297 WSIPCDILIPAA-IEDQITINNANNVT-AKIILEGANGPT--TTEADDILRD 344 (428)
Q Consensus 297 l~~~~DIliPaA-~~~~It~~na~~l~-akiIvegAN~p~--t~ea~~iL~~ 344 (428)
+ .+|||++-|. ..+.|+.+....++ -.+|+.-+-+++ ..++-+.|++
T Consensus 330 l-~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL~AL~~ 380 (494)
T 3d64_A 330 A-DKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQW 380 (494)
T ss_dssp T-TTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGGTTSEE
T ss_pred H-hcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCcchhchHHHHhhhc
Confidence 5 3799999985 36678877766664 357787777775 4443344443
No 76
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.99 E-value=0.0046 Score=61.02 Aligned_cols=108 Identities=14% Similarity=0.118 Sum_probs=70.1
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC-CCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD-KTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~-~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|. + -+... . .+.| .+..++.++++
T Consensus 142 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~~--------~~~~~---~-~~~g-------~~~~~~l~ell- 200 (320)
T 1gdh_A 142 EKLDNKTLGIYGFGSIGQALAKRAQGFDMDID-YFDTHR--------ASSSD---E-ASYQ-------ATFHDSLDSLL- 200 (320)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSSC--------CCHHH---H-HHHT-------CEECSSHHHHH-
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCC--------cChhh---h-hhcC-------cEEcCCHHHHH-
Confidence 36899999999999999999999999999986 5553 2 12211 1 1112 22332134454
Q ss_pred cCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc
Q psy8194 299 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~ 348 (428)
.+||+++-|... +.|+++....++ -.+++.-+-+++ +.+ ..+.|++..|.
T Consensus 201 ~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 201 SVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp HHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 379999988753 445555555553 357777777764 444 36778877654
No 77
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.99 E-value=0.0032 Score=65.70 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=69.2
Q ss_pred HhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcc
Q psy8194 217 KINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 296 (428)
Q Consensus 217 ~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~i 296 (428)
..+..+.|++|.|+|+|+||+.+|+.|...|++|+ +.| .++....+.... +.+..+ .+++
T Consensus 250 ~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Vi-v~d----------~~~~~~~~a~~~--------g~~~~~-l~el 309 (479)
T 1v8b_A 250 ATDFLISGKIVVICGYGDVGKGCASSMKGLGARVY-ITE----------IDPICAIQAVME--------GFNVVT-LDEI 309 (479)
T ss_dssp HHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEE-EEC----------SCHHHHHHHHTT--------TCEECC-HHHH
T ss_pred ccccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEE-EEe----------CChhhHHHHHHc--------CCEecC-HHHH
Confidence 35678999999999999999999999999999986 666 445443333221 122223 4455
Q ss_pred cccCceEEeccc-cccccccccccccc-ceEEEecCCCCC
Q psy8194 297 WSIPCDILIPAA-IEDQITINNANNVT-AKIILEGANGPT 334 (428)
Q Consensus 297 l~~~~DIliPaA-~~~~It~~na~~l~-akiIvegAN~p~ 334 (428)
+ ..|||++-|+ ..+.|+.+....++ -.+|+.-+-+++
T Consensus 310 l-~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 310 V-DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp T-TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred H-hcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCCc
Confidence 5 3799999985 46778877777764 357787777765
No 78
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.0083 Score=62.80 Aligned_cols=174 Identities=11% Similarity=0.145 Sum_probs=106.4
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHH-hcCCCcCCCCceeccCCCccccc--C
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT-FTRSIKDFNEGEKINDSKEFWSI--P 300 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~-~~g~l~~~~~~~~i~~~~~il~~--~ 300 (428)
..+|.|+|.|++|+.+|+.|.+.|.+|+ +.| .+.+++.+..+ +.+ + .+....++.+++... +
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~-v~d----------r~~~~~~~l~~~~~~---~-~gi~~~~s~~e~v~~l~~ 74 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVC-AYN----------RTQSKVDHFLANEAK---G-KSIIGATSIEDFISKLKR 74 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSSHHHHHHHHTTTT---T-SSEECCSSHHHHHHTSCS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHccccc---C-CCeEEeCCHHHHHhcCCC
Confidence 3589999999999999999999999874 777 45566666655 211 0 122222223344432 4
Q ss_pred ceEEecccccccccccc----ccccc-ceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh------------
Q psy8194 301 CDILIPAAIEDQITINN----ANNVT-AKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------ 361 (428)
Q Consensus 301 ~DIliPaA~~~~It~~n----a~~l~-akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi------------ 361 (428)
||+++-|...+....+. .+.++ -++|+...|+.. +.+..+.|.++|+.++.-.+. ||..
T Consensus 75 aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVs--gg~~~a~~G~~im~gg 152 (497)
T 2p4q_A 75 PRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVS--GGEEGARYGPSLMPGG 152 (497)
T ss_dssp SCEEEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE--SHHHHHHHCCEEEEEE
T ss_pred CCEEEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcc--cChhHhhcCCeEEecC
Confidence 99999888765333332 23343 479999999874 344556788899987743322 3221
Q ss_pred -hhHHHHHhh----ccc-------CCCC--------HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHH
Q psy8194 362 -VSYFEWVQN----LSN-------LLWT--------EQEINLRLNNIICNAFDAIWELANT-KKVSLRTAAFII 414 (428)
Q Consensus 362 -~s~~E~~qn----~~~-------~~w~--------~e~v~~~l~~~m~~~~~~v~~~a~~-~~~~~r~aA~~~ 414 (428)
-..++.++. ... ..|- ..-+...+...+...+.+.+..+++ .|+++.+...++
T Consensus 153 ~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 153 SEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVF 226 (497)
T ss_dssp CGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 122333322 211 1121 1234455666666888899999999 699988877665
No 79
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.96 E-value=0.00065 Score=68.35 Aligned_cols=170 Identities=12% Similarity=0.126 Sum_probs=93.5
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC----CCEEEEEEcCCCeeeCCC--CCCH-HHHHHHHHhc-CCCcCCCCceeccCCC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA----GAKIVAIQDDKTTIYNPN--GFNI-PKLQKYVTFT-RSIKDFNEGEKINDSK 294 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~----GakvVaVsD~~G~i~n~~--GlD~-~~l~~~~~~~-g~l~~~~~~~~i~~~~ 294 (428)
+-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++...++++ |++. ....+..+.. + ...+ .+
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~~--------~~~d-id 73 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT--------KTLP-LD 73 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC--------BCCC-HH
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhcccC--------CCCC-HH
Confidence 346899999999999999999886 379999999988778777 8864 3333333321 1 0001 22
Q ss_pred cccc-----cCceEEecccccccccccccccccc-eEEEecCCCCCC---HHHHHHH--HHCCCceeccccccccc---h
Q psy8194 295 EFWS-----IPCDILIPAAIEDQITINNANNVTA-KIILEGANGPTT---TEADDIL--RDKGIILAPDVITNAGG---V 360 (428)
Q Consensus 295 ~il~-----~~~DIliPaA~~~~It~~na~~l~a-kiIvegAN~p~t---~ea~~iL--~~rGI~viPD~laNaGG---V 360 (428)
.+++ ...||++.|+.....-.....-+++ |-|+-+--.|++ .++.++. +++|+.+. |-++.|| +
T Consensus 74 ~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~~A~~~gv~~~--~Ea~vg~giPi 151 (358)
T 1ebf_A 74 DLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVY--HEATVGAGLPI 151 (358)
T ss_dssp HHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEE--CGGGTTTTSSC
T ss_pred HHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHHHHHHcCCEEE--EccccccCCcH
Confidence 2331 1339999999755432222223322 334432224654 5555543 34687765 3333333 3
Q ss_pred hhhHHHHHhhcccC-----CC--CHHHHHHHH----HHHHHHHHHHHHHHHHhcCC
Q psy8194 361 IVSYFEWVQNLSNL-----LW--TEQEINLRL----NNIICNAFDAIWELANTKKV 405 (428)
Q Consensus 361 i~s~~E~~qn~~~~-----~w--~~e~v~~~l----~~~m~~~~~~v~~~a~~~~~ 405 (428)
+...-+.+..-... -+ +..-+..++ ++ ...|.+++..|++.|.
T Consensus 152 i~~l~~~l~~G~~I~~I~GIlnGT~nyil~~m~~~~~~--g~~f~~~l~eAq~~Gy 205 (358)
T 1ebf_A 152 ISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQAN--DVKFSDVVKVAKKLGY 205 (358)
T ss_dssp HHHHHHHHHHTCCEEEEEEECCHHHHHHHHHHSCSSCC--CCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCeEEEEEEEeecceeeeccccccccc--CCCHHHHHHHHHHcCC
Confidence 44444444210000 01 122233333 11 1479999999999885
No 80
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=96.95 E-value=0.0016 Score=68.68 Aligned_cols=181 Identities=17% Similarity=0.120 Sum_probs=127.4
Q ss_pred CCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHH
Q psy8194 128 NLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGV 207 (428)
Q Consensus 128 ~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv 207 (428)
..+-.|.+.+...|++.+....||...|==+|++. ..---+.+.|+.- -.++. +-..-||-=+
T Consensus 205 Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~--~~af~il~ryr~~-----ipvFn----------DDiqGTa~V~ 267 (564)
T 1pj3_A 205 RDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGN--HNAFRFLRKYREK-----YCTFN----------DDIQGTAAVA 267 (564)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT-----SSEEE----------HHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCC--ccHHHHHHHhccC-----CCEeC----------CCCchHHHHH
Confidence 34667888999999999999888877777789864 3444567788641 22332 2234677777
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHH----CCC------EEEEEEcCCCeeeCCC--CCCHHHHHHHH
Q psy8194 208 FIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK----AGA------KIVAIQDDKTTIYNPN--GFNIPKLQKYV 275 (428)
Q Consensus 208 ~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~----~Ga------kvVaVsD~~G~i~n~~--GlD~~~l~~~~ 275 (428)
..++..+++-.|.++++.||++.|.|..|.++|++|.. .|. +=+-++|++|-|+... +++..+ ..+.
T Consensus 268 lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k-~~~A 346 (564)
T 1pj3_A 268 LAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQ-EPFT 346 (564)
T ss_dssp HHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTT-GGGC
T ss_pred HHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHH-HHHH
Confidence 78889999999999999999999999999999999986 784 2235999999999854 454322 0111
Q ss_pred HhcCCCcCCCCceeccCCCccc-ccCceEEecccc-ccccccccccccc----ceEEEecCCCCC
Q psy8194 276 TFTRSIKDFNEGEKINDSKEFW-SIPCDILIPAAI-EDQITINNANNVT----AKIILEGANGPT 334 (428)
Q Consensus 276 ~~~g~l~~~~~~~~i~~~~~il-~~~~DIliPaA~-~~~It~~na~~l~----akiIvegAN~p~ 334 (428)
+.+. ... ..+..+.+ .+++||||=++. ++++|++-+.... -.||---+| |+
T Consensus 347 ~~~~------~~~-~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN-Pt 403 (564)
T 1pj3_A 347 HSAP------ESI-PDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN-PT 403 (564)
T ss_dssp BCCC------SSC-CSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS-SG
T ss_pred HhcC------ccc-cCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC-CC
Confidence 1100 000 01122333 348999999995 8999999888774 578888888 54
No 81
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.93 E-value=0.0011 Score=62.61 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=59.3
Q ss_pred hCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHH--------------HHHHHHhcCCCcC
Q psy8194 218 INLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPK--------------LQKYVTFTRSIKD 283 (428)
Q Consensus 218 ~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~--------------l~~~~~~~g~l~~ 283 (428)
...++.+++|.|+|+|++|+.+|+.|.+.|..|+ +.|. +.+. +.++.++.+
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~-~~~r----------~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 77 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVT-IGTR----------DPKATLARAEPDAMGAPPFSQWLPEHP---- 77 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES----------CHHHHHTCC-------CCHHHHGGGST----
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEE-EEeC----------ChhhhhhhhhhhhhcchhhhHHHhhcC----
Confidence 3457889999999999999999999999999985 6673 4443 333332221
Q ss_pred CCCceeccCCCcccccCceEEeccccccccccc---c-cccccceEEEecCCC
Q psy8194 284 FNEGEKINDSKEFWSIPCDILIPAAIEDQITIN---N-ANNVTAKIILEGANG 332 (428)
Q Consensus 284 ~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~---n-a~~l~akiIvegAN~ 332 (428)
.....+ ..+.+ .+||++|-|.....+.+. . .+.+.-++|+..+|+
T Consensus 78 --~~~~~~-~~e~~-~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~ 126 (245)
T 3dtt_A 78 --HVHLAA-FADVA-AGAELVVNATEGASSIAALTAAGAENLAGKILVDIANP 126 (245)
T ss_dssp --TCEEEE-HHHHH-HHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCC
T ss_pred --ceeccC-HHHHH-hcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCC
Confidence 111112 33333 479999998876554321 1 223356799999985
No 82
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=96.93 E-value=0.011 Score=61.36 Aligned_cols=174 Identities=14% Similarity=0.158 Sum_probs=105.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHH-hcCCCcCCCCceeccCCCcccc--cCc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT-FTRSIKDFNEGEKINDSKEFWS--IPC 301 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~-~~g~l~~~~~~~~i~~~~~il~--~~~ 301 (428)
++|.|+|.|++|+.+|..|.+.|.+| .+.| .+.+++.++.+ +.. + .+....++.+++.. .+|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V-~v~d----------r~~~~~~~l~~~~~~---g-~gi~~~~~~~e~v~~l~~a 67 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVV-CAFN----------RTVSKVDDFLANEAK---G-TKVLGAHSLEEMVSKLKKP 67 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEEC----------SSTHHHHHHHHTTTT---T-SSCEECSSHHHHHHHBCSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeE-EEEe----------CCHHHHHHHHhcccc---C-CCeEEeCCHHHHHhhccCC
Confidence 57999999999999999999999987 4667 34556665554 210 1 12222232445543 389
Q ss_pred eEEecccccccccccccc----ccc-ceEEEecCCCCC--CHHHHHHHHHCCCceeccccccccchh-------------
Q psy8194 302 DILIPAAIEDQITINNAN----NVT-AKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------- 361 (428)
Q Consensus 302 DIliPaA~~~~It~~na~----~l~-akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laNaGGVi------------- 361 (428)
|+++-|.....-..+.+. .++ -++|+...|+.. +.+..+.|.++|+.++.- .++||..
T Consensus 68 DvVilaVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~--pv~g~~~~a~~g~~i~~gg~ 145 (482)
T 2pgd_A 68 RRIILLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGS--GVSGGEDGARYGPSLMPGGN 145 (482)
T ss_dssp CEEEECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE--EEESHHHHHHHCCEEEEEEC
T ss_pred CEEEEeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCC--CCCCChhhhccCCeEEeCCC
Confidence 999998876533333333 232 468999999874 334556788889887632 2233322
Q ss_pred hhHHHHHh----hcccC--------CCC--------HHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHH
Q psy8194 362 VSYFEWVQ----NLSNL--------LWT--------EQEINLRLNNIICNAFDAIWELANTK-KVSLRTAAFIIG 415 (428)
Q Consensus 362 ~s~~E~~q----n~~~~--------~w~--------~e~v~~~l~~~m~~~~~~v~~~a~~~-~~~~r~aA~~~a 415 (428)
-..++.++ ..... .|- ..-+...+...+...+.+.+..+++. |+++.+...++.
T Consensus 146 ~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~ 220 (482)
T 2pgd_A 146 KEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFE 220 (482)
T ss_dssp TTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 11223332 22111 121 12234445555567888899999998 999887666553
No 83
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.92 E-value=0.0033 Score=65.89 Aligned_cols=94 Identities=18% Similarity=0.198 Sum_probs=63.2
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+..+.|++|+|+|+|.||+.+|+.+...|++|+ +.| .+...+....+. | .+.++ .++++
T Consensus 269 ~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Vi-v~d----------~~~~~~~~A~~~-G-------a~~~~-l~e~l- 327 (494)
T 3ce6_A 269 DALIGGKKVLICGYGDVGKGCAEAMKGQGARVS-VTE----------IDPINALQAMME-G-------FDVVT-VEEAI- 327 (494)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT-T-------CEECC-HHHHG-
T ss_pred CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHc-C-------CEEec-HHHHH-
Confidence 456899999999999999999999999999986 677 566665544432 2 22233 34444
Q ss_pred cCceEEecccc-ccccccccccccc-ceEEEecCCCC
Q psy8194 299 IPCDILIPAAI-EDQITINNANNVT-AKIILEGANGP 333 (428)
Q Consensus 299 ~~~DIliPaA~-~~~It~~na~~l~-akiIvegAN~p 333 (428)
..+||++.|+. .+.|+.+....++ --+|+.-+..+
T Consensus 328 ~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 328 GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 47999999975 4456645555553 23444444444
No 84
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.90 E-value=0.0052 Score=61.11 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=68.7
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+.. -. . +....++.++++
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~dr~~~-----~~---------------~---g~~~~~~l~ell- 213 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEAFDCPIS-YFSRSKK-----PN---------------T---NYTYYGSVVELA- 213 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEE-EECSSCC-----TT---------------C---CSEEESCHHHHH-
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECCCch-----hc---------------c---CceecCCHHHHH-
Confidence 347899999999999999999999999999985 5564311 00 0 112222133444
Q ss_pred cCceEEecccccc-----ccccccccccc-ceEEEecCCCCC-C-HHHHHHHHHCCCc
Q psy8194 299 IPCDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~~~-----~It~~na~~l~-akiIvegAN~p~-t-~ea~~iL~~rGI~ 348 (428)
.+||+++-|...+ .|+.+....++ -.+++.-+.+++ + .+..+.|.+.++.
T Consensus 214 ~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ 271 (333)
T 3ba1_A 214 SNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLG 271 (333)
T ss_dssp HTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSC
T ss_pred hcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCe
Confidence 3799999887644 34433333343 357788888875 3 4456778877664
No 85
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.89 E-value=0.0018 Score=57.66 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=65.6
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc--
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-- 297 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il-- 297 (428)
++.+.+|+|.|+|.+|+.+++.|.+. |.+|+ +.| .|.+.+.++.+..-.+. +.+. + ..+.+
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~-vid----------~~~~~~~~~~~~g~~~~-~gd~---~-~~~~l~~ 99 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISL-GIE----------IREEAAQQHRSEGRNVI-SGDA---T-DPDFWER 99 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEE-EEE----------SCHHHHHHHHHTTCCEE-ECCT---T-CHHHHHT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEE-EEE----------CCHHHHHHHHHCCCCEE-EcCC---C-CHHHHHh
Confidence 56788999999999999999999999 99987 556 46666666554321110 0000 1 11111
Q ss_pred ---ccCceEEeccccccccccc---ccccc--cceEEEecCCCCCCHHHHHHHHHCCCce
Q psy8194 298 ---SIPCDILIPAAIEDQITIN---NANNV--TAKIILEGANGPTTTEADDILRDKGIIL 349 (428)
Q Consensus 298 ---~~~~DIliPaA~~~~It~~---na~~l--~akiIvegAN~p~t~ea~~iL~~rGI~v 349 (428)
-.++|++|-|......+.. .+..+ ..++|+-. | +++..+.|++.|+-+
T Consensus 100 ~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~---~~~~~~~l~~~G~~~ 155 (183)
T 3c85_A 100 ILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIA-E---YPDQLEGLLESGVDA 155 (183)
T ss_dssp BCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEE-S---SHHHHHHHHHHTCSE
T ss_pred ccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEE-C---CHHHHHHHHHcCCCE
Confidence 1368999987754333222 22222 34566643 2 355566788888754
No 86
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.89 E-value=0.0047 Score=60.73 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=70.1
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccH-HHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 199 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 199 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
-.+.|..|+. +++++++.+++|++++|+|.|+ ||+.+|++|...|++| .|++++- -|
T Consensus 144 ~~PcTp~gi~----~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtV-tv~hs~t-------~~---------- 201 (301)
T 1a4i_A 144 FIPCTPKGCL----ELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATV-TTCHSKT-------AH---------- 201 (301)
T ss_dssp CCCHHHHHHH----HHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEE-EEECTTC-------SS----------
T ss_pred ccCchHHHHH----HHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeE-EEEECCc-------cc----------
Confidence 3578988855 4556678999999999999996 8999999999999997 5887420 00
Q ss_pred cCCCcCCCCceeccCCCcccccCceEEecccc-cccccccccccccceEEEecCCCCC
Q psy8194 278 TRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGPT 334 (428)
Q Consensus 278 ~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~akiIvegAN~p~ 334 (428)
..+ ...++||+|-|.. .+.|+.+-+. .--+|++-+-+++
T Consensus 202 ---------------L~~-~~~~ADIVI~Avg~p~~I~~~~vk--~GavVIDVgi~~~ 241 (301)
T 1a4i_A 202 ---------------LDE-EVNKGDILVVATGQPEMVKGEWIK--PGAIVIDCGINYV 241 (301)
T ss_dssp ---------------HHH-HHTTCSEEEECCCCTTCBCGGGSC--TTCEEEECCCBC-
T ss_pred ---------------HHH-HhccCCEEEECCCCcccCCHHHcC--CCcEEEEccCCCc
Confidence 011 1247899999887 6688887654 2347777777665
No 87
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.88 E-value=0.0098 Score=56.93 Aligned_cols=170 Identities=17% Similarity=0.250 Sum_probs=97.1
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+++.|.+.|.+| .+.| .+.+.+.++.+. | ....++.++.+ .+||++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~----------~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D~v 65 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSL-VVSD----------RNPEAIADVIAA-G-------AETASTAKAIA-EQCDVI 65 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEEC----------SCHHHHHHHHHT-T-------CEECSSHHHHH-HHCSEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEE-EEEe----------CCHHHHHHHHHC-C-------CeecCCHHHHH-hCCCEE
Confidence 58999999999999999999999987 5777 456666655543 2 22222233444 369999
Q ss_pred eccccccccccccc-------ccc-cceEEEecCCCCC--CHHHHHHHHHCCCceeccccc-c-----ccch------hh
Q psy8194 305 IPAAIEDQITINNA-------NNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVIT-N-----AGGV------IV 362 (428)
Q Consensus 305 iPaA~~~~It~~na-------~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~la-N-----aGGV------i~ 362 (428)
+-|........... +.+ .-++|+.-+|+.. +.+..+.+.++|+.++.-.+. + .|++ --
T Consensus 66 i~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~ 145 (299)
T 1vpd_A 66 ITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDK 145 (299)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCH
T ss_pred EEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCH
Confidence 99886332222111 223 2458888888764 234556777888877632211 1 1111 11
Q ss_pred hHHHHHhhcc---c--CCC----CHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 363 SYFEWVQNLS---N--LLW----TEQEI----NLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 363 s~~E~~qn~~---~--~~w----~~e~v----~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
..++.++.+- + ..+ ..... ..-+...+...+.+.+..+++.|+++.++...+
T Consensus 146 ~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 210 (299)
T 1vpd_A 146 AIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI 210 (299)
T ss_dssp HHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 1233333211 0 011 11111 222334444677888888999999987655443
No 88
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=96.88 E-value=0.0023 Score=67.40 Aligned_cols=178 Identities=17% Similarity=0.170 Sum_probs=128.2
Q ss_pred CCCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHH
Q psy8194 128 NLSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGV 207 (428)
Q Consensus 128 ~~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv 207 (428)
..+-.|-+.+...|++++.+..||...|==+|++. ..---+.+.|+.- -.++. +-..-||-=+
T Consensus 203 Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~--~~af~il~ryr~~-----ipvFn----------DDiqGTa~V~ 265 (555)
T 1gq2_A 203 RIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFAN--ANAFRLLHKYRNK-----YCTFN----------DDIQGTASVA 265 (555)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT-----SEEEE----------TTTHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCC--ccHHHHHHHHhcc-----CCEec----------CccchHHHHH
Confidence 34667888899999999999889877777789863 3444567788641 22222 3345677778
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHH----CCC-------EEEEEEcCCCeeeCCC-CCCHHHHHHHH
Q psy8194 208 FIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK----AGA-------KIVAIQDDKTTIYNPN-GFNIPKLQKYV 275 (428)
Q Consensus 208 ~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~----~Ga-------kvVaVsD~~G~i~n~~-GlD~~~l~~~~ 275 (428)
..++..+++-.|.++++.||++.|.|..|.++|++|.. .|. +| -++|++|-|+... +++..+
T Consensus 266 lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i-~~~D~~Gli~~~r~~l~~~k----- 339 (555)
T 1gq2_A 266 VAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRI-WMVDSKGLIVKGRASLTPEK----- 339 (555)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTE-EEEETTEECBTTCSSCCTTG-----
T ss_pred HHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcE-EEEECCCeeeCCCCCchHHH-----
Confidence 88899999999999999999999999999999999987 684 45 5999999999753 344322
Q ss_pred HhcCCCcCCCCceeccCCCccc-ccCceEEecccc-ccccccccccccc----ceEEEecCCCCC
Q psy8194 276 TFTRSIKDFNEGEKINDSKEFW-SIPCDILIPAAI-EDQITINNANNVT----AKIILEGANGPT 334 (428)
Q Consensus 276 ~~~g~l~~~~~~~~i~~~~~il-~~~~DIliPaA~-~~~It~~na~~l~----akiIvegAN~p~ 334 (428)
+..-.- . ....+..+.+ .+++||||=++. ++++|++-+.... -.||---+| |+
T Consensus 340 ~~~A~~---~--~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN-Pt 398 (555)
T 1gq2_A 340 EHFAHE---H--CEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSN-PT 398 (555)
T ss_dssp GGGCBS---C--CCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCS-SG
T ss_pred HHHHhh---c--CCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC-CC
Confidence 111000 0 0011122333 357999999995 8999999888873 578888888 54
No 89
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.88 E-value=0.0049 Score=61.11 Aligned_cols=108 Identities=16% Similarity=0.158 Sum_probs=68.7
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+. +.+.. .+.| ....+ .++++
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~--------~~~~~----~~~g-------~~~~~-l~~~l- 202 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRIL-YYSRTR--------KEEVE----RELN-------AEFKP-LEDLL- 202 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSC--------CHHHH----HHHC-------CEECC-HHHHH-
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEE-EECCCc--------chhhH----hhcC-------cccCC-HHHHH-
Confidence 347899999999999999999999999999986 555431 22111 1112 12212 33444
Q ss_pred cCceEEeccccccc-----cccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc
Q psy8194 299 IPCDILIPAAIEDQ-----ITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~~~~-----It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~ 348 (428)
.+||+++-|...+. ++.+....++ -.+++.-+.+++ +.+ ..+.|.+..|.
T Consensus 203 ~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ 260 (334)
T 2dbq_A 203 RESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIA 260 (334)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCee
Confidence 37999999886544 3333333443 357778888875 433 35678776553
No 90
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.87 E-value=0.00096 Score=56.85 Aligned_cols=106 Identities=11% Similarity=0.125 Sum_probs=62.3
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc----c
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW----S 298 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il----~ 298 (428)
+.++|+|.|+|.+|+.+++.|.+.|.+|+ +.| .|.+.+.+..+..-.+ +. +. .+ ..+.+ -
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~-~id----------~~~~~~~~~~~~~~~~--~~-gd-~~-~~~~l~~~~~ 68 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVL-AVD----------KSKEKIELLEDEGFDA--VI-AD-PT-DESFYRSLDL 68 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEE-EEE----------SCHHHHHHHHHTTCEE--EE-CC-TT-CHHHHHHSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEE-EEE----------CCHHHHHHHHHCCCcE--EE-CC-CC-CHHHHHhCCc
Confidence 45689999999999999999999999987 556 4667766665432100 00 00 11 11222 1
Q ss_pred cCceEEeccccccccc---ccccccc-cceEEEecCCCCCCHHHHHHHHHCCCc
Q psy8194 299 IPCDILIPAAIEDQIT---INNANNV-TAKIILEGANGPTTTEADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~~~~It---~~na~~l-~akiIvegAN~p~t~ea~~iL~~rGI~ 348 (428)
.++|++|-|......+ ...+.++ ..++|+-.. +++..+.|++.|+-
T Consensus 69 ~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~~----~~~~~~~l~~~G~~ 118 (141)
T 3llv_A 69 EGVSAVLITGSDDEFNLKILKALRSVSDVYAIVRVS----SPKKKEEFEEAGAN 118 (141)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEEEES----CGGGHHHHHHTTCS
T ss_pred ccCCEEEEecCCHHHHHHHHHHHHHhCCceEEEEEc----ChhHHHHHHHcCCC
Confidence 3789998877633222 2233333 234555432 23445677788873
No 91
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=96.83 E-value=0.0023 Score=67.87 Aligned_cols=178 Identities=13% Similarity=0.095 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHHHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHH
Q psy8194 129 LSNNELMRLTRRYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVF 208 (428)
Q Consensus 129 ~s~~ele~~~r~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~ 208 (428)
.+-.|.+.+...|++++.+..||...|==+|++. ..---|.+.|+.- -.++. +-..-||-=+.
T Consensus 242 v~g~~Yd~fvdefv~av~~~fGp~~~I~~EDf~~--p~af~il~ryr~~-----ipvFn----------DDiqGTA~V~l 304 (605)
T 1o0s_A 242 VRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFAN--PNAFRLLDKYQDK-----YTMFN----------DDIQGTASVIV 304 (605)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT-----SEEEE----------HHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhCCCcEeeHhhcCC--ccHHHHHHHhccC-----CCeeC----------cccchHHHHHH
Confidence 4567888899999999999889877777789863 3344567788641 22222 22346777777
Q ss_pred HHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHH----CCC------EEEEEEcCCCeeeCCC-CCCHHHHHHHHHh
Q psy8194 209 IIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK----AGA------KIVAIQDDKTTIYNPN-GFNIPKLQKYVTF 277 (428)
Q Consensus 209 ~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~----~Ga------kvVaVsD~~G~i~n~~-GlD~~~l~~~~~~ 277 (428)
.++..+++-.|.++++.||++.|.|..|.++|++|.. .|. +=+-++|++|-|+... +++..+ +.
T Consensus 305 AgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k-----~~ 379 (605)
T 1o0s_A 305 AGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRH-----VQ 379 (605)
T ss_dssp HHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGG-----TT
T ss_pred HHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHH-----HH
Confidence 8889999999999999999999999999999999988 785 2335999999999753 344322 11
Q ss_pred cCCCcCCCCceeccCCCccc-ccCceEEecccc-cccccccccccc----cceEEEecCCCCC
Q psy8194 278 TRSIKDFNEGEKINDSKEFW-SIPCDILIPAAI-EDQITINNANNV----TAKIILEGANGPT 334 (428)
Q Consensus 278 ~g~l~~~~~~~~i~~~~~il-~~~~DIliPaA~-~~~It~~na~~l----~akiIvegAN~p~ 334 (428)
. ..-. ....+..+.+ .+++||||=++. ++++|++-+... .-.||---+| |+
T Consensus 380 ~---A~~~--~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN-Pt 436 (605)
T 1o0s_A 380 F---AKDM--PETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSN-PT 436 (605)
T ss_dssp T---CBSS--CCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCS-SG
T ss_pred H---Hhhc--CCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC-CC
Confidence 1 0000 0111122333 357999999995 899999988887 3578888888 54
No 92
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.82 E-value=0.0075 Score=61.89 Aligned_cols=112 Identities=19% Similarity=0.305 Sum_probs=73.9
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+++.|+|+|++|+.+|+.|...|.+|+ +.|.+... . ..+.....+.++++
T Consensus 151 ~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~yd~~~~~-------------------~---~~~~~~~~sl~ell- 206 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNIGSQVGNLAESLGMTVR-YYDTSDKL-------------------Q---YGNVKPAASLDELL- 206 (416)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECTTCCC-------------------C---BTTBEECSSHHHHH-
T ss_pred CccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECCcchh-------------------c---ccCcEecCCHHHHH-
Confidence 347899999999999999999999999999986 55542100 0 00122222244554
Q ss_pred cCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc-eecccc
Q psy8194 299 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII-LAPDVI 354 (428)
Q Consensus 299 ~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~-viPD~l 354 (428)
..||+++-|... +.|+.+....++ -.+++.-+-+++ ..+ ..+.|++..|. ..=|++
T Consensus 207 ~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf 271 (416)
T 3k5p_A 207 KTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVF 271 (416)
T ss_dssp HHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCC
T ss_pred hhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCC
Confidence 478999887753 566666555553 468889888886 443 45778777654 334433
No 93
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.81 E-value=0.0017 Score=63.99 Aligned_cols=127 Identities=15% Similarity=0.161 Sum_probs=79.9
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCce
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCD 302 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~D 302 (428)
.||+|+|+|++|+..++.|.+. +.++++|+| .|.+.+.+..++.+. ...++|.++++. .++|
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~~~D 66 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISD----------VREDRLREMKEKLGV------EKAYKDPHELIEDPNVD 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEEC----------SCHHHHHHHHHHHTC------SEEESSHHHHHHCTTCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEEC----------CCHHHHHHHHHHhCC------CceeCCHHHHhcCCCCC
Confidence 5899999999999999988774 789999999 677777777666542 123343566775 4899
Q ss_pred EEecccccccccccccccc---cceEEEecCCCCCCHHHH---HHHHHCCCceeccccccccchhhhHHHHH
Q psy8194 303 ILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWV 368 (428)
Q Consensus 303 IliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~---~iL~~rGI~viPD~laNaGGVi~s~~E~~ 368 (428)
+++-|+... .+.+.+... ...+++|=.=.....++. +..+++|+.+...+.----..+....+++
T Consensus 67 ~V~i~tp~~-~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 137 (344)
T 3ezy_A 67 AVLVCSSTN-THSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAV 137 (344)
T ss_dssp EEEECSCGG-GHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHH
T ss_pred EEEEcCCCc-chHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHH
Confidence 999988543 333333322 446888852111123443 44567788776555443333333333443
No 94
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=96.81 E-value=0.0026 Score=63.59 Aligned_cols=113 Identities=20% Similarity=0.235 Sum_probs=74.5
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+||.|+|+|++|+.+|+.|...|.+|+ +.|.+.. . . . +. ..+..+ .++++
T Consensus 143 ~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~-~~d~~~~--------~-~----~-~~-------~~~~~~-l~ell- 198 (343)
T 2yq5_A 143 SNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVI-AYDVAYN--------P-E----F-EP-------FLTYTD-FDTVL- 198 (343)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC--------G-G----G-TT-------TCEECC-HHHHH-
T ss_pred ccccCCCeEEEEecCHHHHHHHHHHhhCCCEEE-EECCChh--------h-h----h-hc-------cccccC-HHHHH-
Confidence 447899999999999999999999999999986 4554311 0 0 0 00 112223 44555
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc-eeccccc
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII-LAPDVIT 355 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~-viPD~la 355 (428)
.+|||++-|.. .+.|+.+....++ -.+++.-+-+++ .. ...+.|++..|. ..=|++.
T Consensus 199 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~ 264 (343)
T 2yq5_A 199 KEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLA 264 (343)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCT
T ss_pred hcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccc
Confidence 47899998776 4556666555553 458888888885 43 445788887763 3334433
No 95
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=96.81 E-value=0.011 Score=56.07 Aligned_cols=164 Identities=15% Similarity=0.115 Sum_probs=93.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+++.|.+ |.+|+ +.| .+.+.+.+..+.. ....+ .++.+ .+||++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~-~~~----------~~~~~~~~~~~~g--------~~~~~-~~~~~-~~~D~v 59 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTL-VWN----------RTFEKALRHQEEF--------GSEAV-PLERV-AEARVI 59 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEE-EEC----------SSTHHHHHHHHHH--------CCEEC-CGGGG-GGCSEE
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEE-EEe----------CCHHHHHHHHHCC--------CcccC-HHHHH-hCCCEE
Confidence 479999999999999999999 99874 677 3445555544431 11122 33334 379999
Q ss_pred ecccccccccccc----ccccc-ceEEEecCCCCC-C-HHHHHHHHHCCCceeccccccccchh--------------hh
Q psy8194 305 IPAAIEDQITINN----ANNVT-AKIILEGANGPT-T-TEADDILRDKGIILAPDVITNAGGVI--------------VS 363 (428)
Q Consensus 305 iPaA~~~~It~~n----a~~l~-akiIvegAN~p~-t-~ea~~iL~~rGI~viPD~laNaGGVi--------------~s 363 (428)
+-|.....-..+. .+.++ -++|+.-.|... + .+..+.+.++|+.+++-.+ .||.. -.
T Consensus 60 i~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~--~~~~~~~~~g~~~~~~~~~~~ 137 (289)
T 2cvz_A 60 FTCLPTTREVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPV--SGGTSGAEAGTLTVMLGGPEE 137 (289)
T ss_dssp EECCSSHHHHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCE--ESHHHHHHHTCEEEEEESCHH
T ss_pred EEeCCChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecC--CCChhHHhhCCeEEEECCCHH
Confidence 9998755422221 22332 357777667542 2 3445667777887764322 22221 11
Q ss_pred HHHHHhhcccC----CCC----HHH----HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Q psy8194 364 YFEWVQNLSNL----LWT----EQE----INLRLNNIICNAFDAIWELANTKKVSLRTAAF 412 (428)
Q Consensus 364 ~~E~~qn~~~~----~w~----~e~----v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~ 412 (428)
.++.++.+-.. .|. ... +...+...+...+.+.+..+++.|+++.++..
T Consensus 138 ~~~~~~~ll~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~ 198 (289)
T 2cvz_A 138 AVERVRPFLAYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALE 198 (289)
T ss_dssp HHHHHGGGCTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHH
Confidence 23444432210 111 111 12233444567788888889999999865543
No 96
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.76 E-value=0.0027 Score=54.40 Aligned_cols=101 Identities=13% Similarity=0.182 Sum_probs=66.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceec-cC--CCcccc---
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI-ND--SKEFWS--- 298 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i-~~--~~~il~--- 298 (428)
.+|+|.|+|.+|+.+++.|.+.|..|+ +.| .|.+.+.++.+. | ...+ .| ..+.|.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~-vid----------~~~~~~~~~~~~-g-------~~~i~gd~~~~~~l~~a~ 68 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLV-VIE----------TSRTRVDELRER-G-------VRAVLGNAANEEIMQLAH 68 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEE-EEE----------SCHHHHHHHHHT-T-------CEEEESCTTSHHHHHHTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEE-EEE----------CCHHHHHHHHHc-C-------CCEEECCCCCHHHHHhcC
Confidence 479999999999999999999999987 556 477777666543 2 1111 10 222332
Q ss_pred -cCceEEecccccccccc---cccccc--cceEEEecCCCCCCHHHHHHHHHCCCc
Q psy8194 299 -IPCDILIPAAIEDQITI---NNANNV--TAKIILEGANGPTTTEADDILRDKGII 348 (428)
Q Consensus 299 -~~~DIliPaA~~~~It~---~na~~l--~akiIvegAN~p~t~ea~~iL~~rGI~ 348 (428)
.++|++|-|......+. ..+.++ ..++|+-.. +++..+.|++-|+-
T Consensus 69 i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~----~~~~~~~l~~~G~d 120 (140)
T 3fwz_A 69 LECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAH----YDDEVAYITERGAN 120 (140)
T ss_dssp GGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEES----SHHHHHHHHHTTCS
T ss_pred cccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEEC----CHHHHHHHHHCCCC
Confidence 37899998876554333 234333 457777543 45666788888884
No 97
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.75 E-value=0.0013 Score=63.71 Aligned_cols=113 Identities=13% Similarity=0.194 Sum_probs=73.4
Q ss_pred CCCceEEEEeccHHHHH-HHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 222 IINSKISIQGFGNVGSV-AANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~-~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
++-.||+|+|+|++|+. .++.|.+ .++++++|+| .|.+.+.+..++.+.- ..++.++++.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~~~~-------~~~~~~~ll~- 65 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFT----------PNKVKREKICSDYRIM-------PFDSIESLAK- 65 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEEC----------SCHHHHHHHHHHHTCC-------BCSCHHHHHT-
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEEC----------CCHHHHHHHHHHcCCC-------CcCCHHHHHh-
Confidence 34579999999999995 8888877 5799999999 6788887777765421 1333567777
Q ss_pred CceEEecccccccccccccccc---cceEEEecCCCCCCHHHH---HHHHHCCCceeccc
Q psy8194 300 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDV 353 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~---~iL~~rGI~viPD~ 353 (428)
++|+++-|+... .+.+.+... ...+++|=.=.....++. +..+++|+.+...+
T Consensus 66 ~~D~V~i~tp~~-~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~ 124 (308)
T 3uuw_A 66 KCDCIFLHSSTE-THYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGF 124 (308)
T ss_dssp TCSEEEECCCGG-GHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred cCCEEEEeCCcH-hHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEee
Confidence 999999887544 333333322 345788741111123443 34566787665443
No 98
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.75 E-value=0.002 Score=61.85 Aligned_cols=108 Identities=17% Similarity=0.233 Sum_probs=70.7
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
.++|.|+|+|++|+.+++.|.+.|.+|+ +.| .+.+.+.++.++ | ....++.++.+ .+||+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~----------~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D~ 63 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVY-AFD----------LMEANVAAVVAQ-G-------AQACENNQKVA-AASDI 63 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHTT-T-------CEECSSHHHHH-HHCSE
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHHC-C-------CeecCCHHHHH-hCCCE
Confidence 3689999999999999999999999874 777 455666555433 1 22222233444 36999
Q ss_pred Eeccccccccccc-------ccccc-cceEEEecCCCCC--CHHHHHHHHHCCCceec
Q psy8194 304 LIPAAIEDQITIN-------NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAP 351 (428)
Q Consensus 304 liPaA~~~~It~~-------na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viP 351 (428)
++-|.....-... -.+.+ .-++|+.-+|+.. ..+..+.+.++|+.++.
T Consensus 64 vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~ 121 (301)
T 3cky_A 64 IFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD 121 (301)
T ss_dssp EEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 9999854332222 12233 2468888888762 34556677888988763
No 99
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.74 E-value=0.0029 Score=61.78 Aligned_cols=111 Identities=13% Similarity=0.155 Sum_probs=72.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
.||+|+|+|++|+..++.|.+. +.++++|+| .|.++..+..++.+. ....++.+++++.++|+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d----------~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~D~ 65 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYS----------RKLETAATFASRYQN------IQLFDQLEVFFKSSFDL 65 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEEC----------SSHHHHHHHGGGSSS------CEEESCHHHHHTSSCSE
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEe----------CCHHHHHHHHHHcCC------CeEeCCHHHHhCCCCCE
Confidence 4899999999999999998875 689999999 567777766655432 22334355666568999
Q ss_pred Eecccccccccccccccc---cceEEEecCCCCCC-HHHH---HHHHHCCCceeccc
Q psy8194 304 LIPAAIEDQITINNANNV---TAKIILEGANGPTT-TEAD---DILRDKGIILAPDV 353 (428)
Q Consensus 304 liPaA~~~~It~~na~~l---~akiIvegAN~p~t-~ea~---~iL~~rGI~viPD~ 353 (428)
++-|+.... +.+.+... ...+++|-. ..+| .++. +..+++|+.+...+
T Consensus 66 V~i~tp~~~-h~~~~~~al~~gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~~~~ 120 (325)
T 2ho3_A 66 VYIASPNSL-HFAQAKAALSAGKHVILEKP-AVSQPQEWFDLIQTAEKNNCFIFEAA 120 (325)
T ss_dssp EEECSCGGG-HHHHHHHHHHTTCEEEEESS-CCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEeCChHH-HHHHHHHHHHcCCcEEEecC-CcCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 999886443 33333332 335888842 1123 3444 34567888776433
No 100
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=96.74 E-value=0.014 Score=55.83 Aligned_cols=167 Identities=17% Similarity=0.188 Sum_probs=90.3
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+++.|.+.|.+|+ +.| .+.+.+.++.+. | ....++.++.+ .+||++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~-~~~----------~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~Dvv 60 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLI-IYD----------VFPDACKEFQDA-G-------EQVVSSPADVA-EKADRI 60 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEE-EEC----------SSTHHHHHHHTT-T-------CEECSSHHHHH-HHCSEE
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHc-C-------CeecCCHHHHH-hcCCEE
Confidence 479999999999999999999999874 667 344555554432 1 22222233444 378999
Q ss_pred eccccccccccccc-------ccc-cceEEEecCCCCCCH---HHHHHHHHCCCceeccccccccch----------h--
Q psy8194 305 IPAAIEDQITINNA-------NNV-TAKIILEGANGPTTT---EADDILRDKGIILAPDVITNAGGV----------I-- 361 (428)
Q Consensus 305 iPaA~~~~It~~na-------~~l-~akiIvegAN~p~t~---ea~~iL~~rGI~viPD~laNaGGV----------i-- 361 (428)
+-|........+.+ +.+ .-++|+. .++-... +..+.+.++|+.+ |+.-. .+|. .
T Consensus 61 i~~vp~~~~~~~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~g~~~-~~~p~-~~g~~~a~~~~~~~~~~ 137 (296)
T 2gf2_A 61 ITMLPTSINAIEAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKMGAVF-MDAPV-SGGVGAARSGNLTFMVG 137 (296)
T ss_dssp EECCSSHHHHHHHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHTTCEE-EECCE-ESHHHHHHHTCEEEEEE
T ss_pred EEeCCCHHHHHHHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHcCCEE-EEcCC-CCChhHHhcCcEEEEeC
Confidence 99874332222211 223 2458888 4433222 2234566777654 44322 2331 1
Q ss_pred --hhHHHHHhhccc----CCC-----CH----HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 362 --VSYFEWVQNLSN----LLW-----TE----QEINLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 362 --~s~~E~~qn~~~----~~w-----~~----e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
-..++.++.+-. ..| .. .-++..+...+...+.+.+..+++.|+++.++..++
T Consensus 138 ~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~ 205 (296)
T 2gf2_A 138 GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKIL 205 (296)
T ss_dssp SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 112333332211 011 01 111222333334578888889999999987655443
No 101
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.73 E-value=0.0029 Score=61.67 Aligned_cols=107 Identities=13% Similarity=0.224 Sum_probs=69.2
Q ss_pred ceEEEEeccHHHHHH-HHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCce
Q psy8194 225 SKISIQGFGNVGSVA-ANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCD 302 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~-a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~D 302 (428)
.||+|+|+|++|+.. ++.|.+.+.++++|+| .|.+...+..++.+.. ..+++.++++. .++|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d----------~~~~~~~~~~~~~g~~------~~~~~~~~~l~~~~~D 64 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMS----------TSAERGAAYATENGIG------KSVTSVEELVGDPDVD 64 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEEC----------SCHHHHHHHHHHTTCS------CCBSCHHHHHTCTTCC
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEEC----------CCHHHHHHHHHHcCCC------cccCCHHHHhcCCCCC
Confidence 479999999999987 7777778899999999 5777777766654421 12332456665 4799
Q ss_pred EEeccccccccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHHCCCceec
Q psy8194 303 ILIPAAIEDQITINNANN-V--TAKIILEGANGPT--T-TEADD---ILRDKGIILAP 351 (428)
Q Consensus 303 IliPaA~~~~It~~na~~-l--~akiIvegAN~p~--t-~ea~~---iL~~rGI~viP 351 (428)
+++-|+.... +.+.+.. + ...+++|- |+ + .++.+ ..+++|+.+..
T Consensus 65 ~V~i~tp~~~-h~~~~~~al~~Gk~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~ 118 (332)
T 2glx_A 65 AVYVSTTNEL-HREQTLAAIRAGKHVLCEK---PLAMTLEDAREMVVAAREAGVVLGT 118 (332)
T ss_dssp EEEECSCGGG-HHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEeCChhH-hHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999886443 3333322 2 33477763 53 3 34433 34567877654
No 102
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.72 E-value=0.0048 Score=52.95 Aligned_cols=89 Identities=22% Similarity=0.235 Sum_probs=57.6
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
+++|.|+|.|++|+.+++.|.+.|++ |.|.| .+.+++.++.++.+. .....++..+.+ .++|+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~----------r~~~~~~~~a~~~~~-----~~~~~~~~~~~~-~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAG----------RNIDHVRAFAEKYEY-----EYVLINDIDSLI-KNNDV 83 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEE----------SCHHHHHHHHHHHTC-----EEEECSCHHHHH-HTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc----------CCHHHHHHHHHHhCC-----ceEeecCHHHHh-cCCCE
Confidence 88999999999999999999999999 67888 567777776665431 011112112222 47999
Q ss_pred Eecccccc--cccccccccccceEEEecCC
Q psy8194 304 LIPAAIED--QITINNANNVTAKIILEGAN 331 (428)
Q Consensus 304 liPaA~~~--~It~~na~~l~akiIvegAN 331 (428)
+|.|+... .++.+... +-++|+.-++
T Consensus 84 vi~at~~~~~~~~~~~l~--~g~~vid~~~ 111 (144)
T 3oj0_A 84 IITATSSKTPIVEERSLM--PGKLFIDLGN 111 (144)
T ss_dssp EEECSCCSSCSBCGGGCC--TTCEEEECCS
T ss_pred EEEeCCCCCcEeeHHHcC--CCCEEEEccC
Confidence 99998643 22222111 2346666655
No 103
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.69 E-value=0.019 Score=55.56 Aligned_cols=116 Identities=15% Similarity=0.118 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
+.|...+++. .+ +++++|.|.|.+|+.++..|.+.|.+| .|.+++ .++..++. +.+
T Consensus 106 ~~Gf~~~L~~----~~----~k~vlvlGaGGaaraia~~L~~~G~~v-~V~nRt----------~~ka~~la-~~~---- 161 (269)
T 3phh_A 106 ALGFYLSLKQ----KN----YQNALILGAGGSAKALACELKKQGLQV-SVLNRS----------SRGLDFFQ-RLG---- 161 (269)
T ss_dssp HHHHHHHCC-----------CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECSS----------CTTHHHHH-HHT----
T ss_pred HHHHHHHHHH----cC----CCEEEEECCCHHHHHHHHHHHHCCCEE-EEEeCC----------HHHHHHHH-HCC----
Confidence 7787777654 23 899999999999999999999999776 577753 22333333 222
Q ss_pred CCCceeccCCCcccccCceEEeccccccc-----ccccccc-cc-cceEEEecCCCCCCHHHHHHHHHCCCcee
Q psy8194 284 FNEGEKINDSKEFWSIPCDILIPAAIEDQ-----ITINNAN-NV-TAKIILEGANGPTTTEADDILRDKGIILA 350 (428)
Q Consensus 284 ~~~~~~i~~~~~il~~~~DIliPaA~~~~-----It~~na~-~l-~akiIvegAN~p~t~ea~~iL~~rGI~vi 350 (428)
.+..+ .+++ . ++||+|-|+.-+. +..+-.. .+ ...+|++-.-+|-|+ -.+..+++|+.++
T Consensus 162 ---~~~~~-~~~l-~-~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P~T~-ll~~A~~~G~~~~ 228 (269)
T 3phh_A 162 ---CDCFM-EPPK-S-AFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGFLTP-FLSLAKELKTPFQ 228 (269)
T ss_dssp ---CEEES-SCCS-S-CCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSSCCH-HHHHHHHTTCCEE
T ss_pred ---CeEec-HHHh-c-cCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCCchH-HHHHHHHCcCEEE
Confidence 22233 3333 2 8999998876442 2222000 22 356899999889444 5566778998764
No 104
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.69 E-value=0.0043 Score=60.85 Aligned_cols=102 Identities=12% Similarity=0.134 Sum_probs=69.8
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+.. +. + .....+.++++ .+
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~dr~~~---~~--------------~-------~~~~~~l~ell-~~ 174 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVR-GFSRTPK---EG--------------P-------WRFTNSLEEAL-RE 174 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEE-EECSSCC---CS--------------S-------SCCBSCSHHHH-TT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCCcc---cc--------------C-------cccCCCHHHHH-hh
Confidence 6899999999999999999999999999986 5564321 00 1 01111144444 37
Q ss_pred ceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc
Q psy8194 301 CDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 348 (428)
Q Consensus 301 ~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~ 348 (428)
|||++-|... +.|+++....++ -.+++.-+.+++ .. +..+.|++..|.
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~ 230 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQF 230 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCce
Confidence 9999988643 455555555664 468888888886 43 345788887653
No 105
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.67 E-value=0.013 Score=57.85 Aligned_cols=132 Identities=11% Similarity=0.070 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
+.|...+++. .+.++++++++|.|.|.+|+.++..|.+.|++-|.|++++. =+.++..++.++.+. .
T Consensus 132 ~~Gf~~~L~~----~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~-------~~~~~a~~la~~~~~--~ 198 (312)
T 3t4e_A 132 GTGHIRAIKE----SGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD-------DFFEKAVAFAKRVNE--N 198 (312)
T ss_dssp HHHHHHHHHH----TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS-------THHHHHHHHHHHHHH--H
T ss_pred HHHHHHHHHh----cCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC-------chHHHHHHHHHHhhh--c
Confidence 6777766653 47889999999999999999999999999994445777420 015555555432211 0
Q ss_pred CCC-ceeccCCCcc---c--ccCceEEecccccccc--ccc----ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCce
Q psy8194 284 FNE-GEKINDSKEF---W--SIPCDILIPAAIEDQI--TIN----NANNV-TAKIILEGANGPT-TTEADDILRDKGIIL 349 (428)
Q Consensus 284 ~~~-~~~i~~~~~i---l--~~~~DIliPaA~~~~I--t~~----na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~v 349 (428)
++. ...++ .+++ - -.++||+|-|+.-+.- +.. ....+ +..+|.+-.-+|. |+= -+.-+++|..+
T Consensus 199 ~~~~v~~~~-~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~l-l~~A~~~G~~~ 276 (312)
T 3t4e_A 199 TDCVVTVTD-LADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKL-LQQAQQAGCKT 276 (312)
T ss_dssp SSCEEEEEE-TTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHH-HHHHHHTTCEE
T ss_pred cCcceEEec-hHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHH-HHHHHHCCCeE
Confidence 110 11222 2221 1 1378999988764431 111 11233 4568999999996 653 34446788766
Q ss_pred e
Q psy8194 350 A 350 (428)
Q Consensus 350 i 350 (428)
+
T Consensus 277 ~ 277 (312)
T 3t4e_A 277 I 277 (312)
T ss_dssp E
T ss_pred E
Confidence 4
No 106
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.66 E-value=0.0026 Score=53.29 Aligned_cols=107 Identities=21% Similarity=0.234 Sum_probs=60.3
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc---cc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW---SI 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il---~~ 299 (428)
++++|+|.|+|.+|+.+++.|.+.|.+|+ +.| .+.+.+.+..++.+. .-+. .. ..+.+.+. -.
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~-~~d----------~~~~~~~~~~~~~~~-~~~~-~d-~~~~~~l~~~~~~ 68 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIV-LID----------IDKDICKKASAEIDA-LVIN-GD-CTKIKTLEDAGIE 68 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHCSS-EEEE-SC-TTSHHHHHHTTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEE-EEE----------CCHHHHHHHHHhcCc-EEEE-cC-CCCHHHHHHcCcc
Confidence 35789999999999999999999999986 556 355555555443221 0000 00 01011111 23
Q ss_pred CceEEecccccccccc---ccccccc-ceEEEecCCCCCCHHHHHHHHHCCC
Q psy8194 300 PCDILIPAAIEDQITI---NNANNVT-AKIILEGANGPTTTEADDILRDKGI 347 (428)
Q Consensus 300 ~~DIliPaA~~~~It~---~na~~l~-akiIvegAN~p~t~ea~~iL~~rGI 347 (428)
++|+++-|+.....+. ..+..++ .++|+. .|++. ..+.|++.|+
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~~-~~~~~---~~~~l~~~g~ 116 (140)
T 1lss_A 69 DADMYIAVTGKEEVNLMSSLLAKSYGINKTIAR-ISEIE---YKDVFERLGV 116 (140)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEE-CSSTT---HHHHHHHTTC
T ss_pred cCCEEEEeeCCchHHHHHHHHHHHcCCCEEEEE-ecCHh---HHHHHHHcCC
Confidence 7899999875443322 2223333 255553 45443 3456777776
No 107
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.65 E-value=0.0034 Score=64.90 Aligned_cols=159 Identities=13% Similarity=0.106 Sum_probs=91.4
Q ss_pred CCceEEEEeccHHHHHHHHHHHH----------CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFK----------AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIND 292 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~----------~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~ 292 (428)
+..+|+|.|+|+||+.+++.|.+ .+.+|++|+|+ |.++..... ++....+|
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~----------~~~~~~~~~---------~~~~~~~d 69 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR----------NLDKAEALA---------GGLPLTTN 69 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS----------CHHHHHHHH---------TTCCEESC
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC----------CHHHhhhhc---------ccCcccCC
Confidence 56799999999999999988864 46899999995 444433331 12233444
Q ss_pred CCcccc-cCceEEeccccccccccccccc-c--cceEEEecCCCCCC-HHH---HHHHHHCCCceeccccccccch---h
Q psy8194 293 SKEFWS-IPCDILIPAAIEDQITINNANN-V--TAKIILEGANGPTT-TEA---DDILRDKGIILAPDVITNAGGV---I 361 (428)
Q Consensus 293 ~~~il~-~~~DIliPaA~~~~It~~na~~-l--~akiIvegAN~p~t-~ea---~~iL~~rGI~viPD~laNaGGV---i 361 (428)
.+++++ .++|+++.|+.+...+.+.+.. + ...+|+| |-..+ .++ .+..+++|+.+. |-++.||- +
T Consensus 70 ~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvte--nkal~a~~~~eL~~~A~~~gv~l~--~Ea~V~~giPii 145 (444)
T 3mtj_A 70 PFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTA--NKHLVAKYGNEIFAAAQAKGVMVT--FEAAVAGGIPII 145 (444)
T ss_dssp THHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEE--CGGGSSTTSCHH
T ss_pred HHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEEC--CcccCHHHHHHHHHHHHHhCCeEE--EEEeeeCChHHH
Confidence 667775 5799999998764455444322 2 3345554 32322 223 345667898775 33433332 2
Q ss_pred hhHHHHHhhc-----cc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy8194 362 VSYFEWVQNL-----SN-LLWTEQEINLRLNNIICNAFDAIWELANTKKV 405 (428)
Q Consensus 362 ~s~~E~~qn~-----~~-~~w~~e~v~~~l~~~m~~~~~~v~~~a~~~~~ 405 (428)
...-|++..- .+ ..-+..-+..++.+. ...|.+++..|++.|.
T Consensus 146 ~~LrelL~~~~Ig~I~GIlnGT~nyilt~m~~~-g~~f~~~l~eAq~lGy 194 (444)
T 3mtj_A 146 KALREGLTANRIEWLAGIINGTSNFILSEMRDK-GAAFDDVLKEAQRLGY 194 (444)
T ss_dssp HHHHTTTTTSCEEEEEEECCHHHHHHHHHHHHH-CCCHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCCCceEEEEEcCCcccccccCCCC-CCCHHHHHHHHHHcCC
Confidence 2222222110 00 011233444444322 2479999999999774
No 108
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.65 E-value=0.013 Score=59.82 Aligned_cols=150 Identities=17% Similarity=0.240 Sum_probs=87.3
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc----cc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW----SI 299 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il----~~ 299 (428)
+.+|+|.|+|.+|+.+++.|.+.|..|+ |.| .|.+.+.++.+. |.-.-|-++ + ..++| -.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vv-vId----------~d~~~v~~~~~~-g~~vi~GDa---t-~~~~L~~agi~ 67 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMV-VLD----------HDPDHIETLRKF-GMKVFYGDA---T-RMDLLESAGAA 67 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEE-EEE----------CCHHHHHHHHHT-TCCCEESCT---T-CHHHHHHTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEE-EEE----------CCHHHHHHHHhC-CCeEEEcCC---C-CHHHHHhcCCC
Confidence 4679999999999999999999999987 667 678887776543 211001011 1 22333 13
Q ss_pred CceEEecccccccccc---cccccc--cceEEEecCCCCCCHHHHHHHHHCCCc-eeccccccccchhhhHHHHHhhccc
Q psy8194 300 PCDILIPAAIEDQITI---NNANNV--TAKIILEGANGPTTTEADDILRDKGII-LAPDVITNAGGVIVSYFEWVQNLSN 373 (428)
Q Consensus 300 ~~DIliPaA~~~~It~---~na~~l--~akiIvegAN~p~t~ea~~iL~~rGI~-viPD~laNaGGVi~s~~E~~qn~~~ 373 (428)
+||++|-|.-....|. ..+.++ +.++|+-+-| ++..+.|.+.|+- ++|.....+--+....++ .
T Consensus 68 ~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~----~~~~~~L~~~Gad~Vi~~~~~~a~~la~~~L~---~--- 137 (413)
T 3l9w_A 68 KAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARD----VDHYIRLRQAGVEKPERETFEGALKTGRLALE---S--- 137 (413)
T ss_dssp TCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEEESS----HHHHHHHHHTTCSSCEETTHHHHHHHHHHHHH---H---
T ss_pred ccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEEECC----HHHHHHHHHCCCCEEECccHHHHHHHHHHHHH---H---
Confidence 7899998886544333 333443 3478776544 5666788899983 333333322222222222 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy8194 374 LLWTEQEINLRLNNIICNAFDAIWEL 399 (428)
Q Consensus 374 ~~w~~e~v~~~l~~~m~~~~~~v~~~ 399 (428)
...+++++.+.++..-...++.+.+.
T Consensus 138 lg~~~~~~~~~~~~~r~~~~~~~~~~ 163 (413)
T 3l9w_A 138 LGLGPYEARERADVFRRFNIQMVEEM 163 (413)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhHHHHHHHH
Confidence 23467777776665544444444343
No 109
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.64 E-value=0.0053 Score=58.49 Aligned_cols=102 Identities=13% Similarity=0.172 Sum_probs=65.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
+||+|.|+|++|+.+++.+.+.+..+|++.|.++.- .. +....++.++++ ++|++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~~-------gv~v~~dl~~l~--~~DVv 58 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------TT-------PYQQYQHIADVK--GADVA 58 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------------------C-------CSCBCSCTTTCT--TCSEE
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------cC-------CCceeCCHHHHh--CCCEE
Confidence 689999999999999999988756999999975420 11 222333345665 89999
Q ss_pred ecccccccccccccccc--cceEEEecCCCCCCHHHHHHHH----HCCCceeccccc
Q psy8194 305 IPAAIEDQITINNANNV--TAKIILEGANGPTTTEADDILR----DKGIILAPDVIT 355 (428)
Q Consensus 305 iPaA~~~~It~~na~~l--~akiIvegAN~p~t~ea~~iL~----~rGI~viPD~la 355 (428)
|.++..+... +|+. + +..+|++-. .++++-.+.|+ +.+|++.|.+..
T Consensus 59 IDft~p~a~~-~~~~-l~~g~~vVigTT--G~s~e~~~~l~~aa~~~~v~~a~N~S~ 111 (243)
T 3qy9_A 59 IDFSNPNLLF-PLLD-EDFHLPLVVATT--GEKEKLLNKLDELSQNMPVFFSANMSY 111 (243)
T ss_dssp EECSCHHHHH-HHHT-SCCCCCEEECCC--SSHHHHHHHHHHHTTTSEEEECSSCCH
T ss_pred EEeCChHHHH-HHHH-HhcCCceEeCCC--CCCHHHHHHHHHHHhcCCEEEECCccH
Confidence 9988766654 3444 4 456676533 35554333333 345666665543
No 110
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.63 E-value=0.0043 Score=60.58 Aligned_cols=95 Identities=19% Similarity=0.277 Sum_probs=67.8
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccH-HHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 199 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 199 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
-.+.|.+|+.. ++++.+.+++|++++|+|.|+ ||+.+|++|...|+.| .|++++- -|+
T Consensus 140 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtV-tv~hs~t-------~~L--------- 198 (285)
T 3l07_A 140 LESCTPKGIMT----MLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATV-TTCHRFT-------TDL--------- 198 (285)
T ss_dssp CCCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEE-EEECTTC-------SSH---------
T ss_pred CCCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeE-EEEeCCc-------hhH---------
Confidence 35789999874 566778999999999999988 8999999999999997 5887530 011
Q ss_pred cCCCcCCCCceeccCCCcccccCceEEecccc-cccccccccccccceEEEecCCCC
Q psy8194 278 TRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGP 333 (428)
Q Consensus 278 ~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~akiIvegAN~p 333 (428)
.+ ...++||+|-|.. .+.|+.+.+.. --+|++-+-+|
T Consensus 199 ----------------~~-~~~~ADIVI~Avg~p~~I~~~~vk~--GavVIDvgi~~ 236 (285)
T 3l07_A 199 ----------------KS-HTTKADILIVAVGKPNFITADMVKE--GAVVIDVGINH 236 (285)
T ss_dssp ----------------HH-HHTTCSEEEECCCCTTCBCGGGSCT--TCEEEECCCEE
T ss_pred ----------------HH-hcccCCEEEECCCCCCCCCHHHcCC--CcEEEEecccC
Confidence 11 1237788888875 55677765532 23666665555
No 111
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.62 E-value=0.0032 Score=62.16 Aligned_cols=107 Identities=14% Similarity=0.117 Sum_probs=70.5
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++.|+||.|+|+|++|+.+|+.|...|.+|++... +.. ..++++ .+.+. .+ .++++ .
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr-~~~--~~~~~~---------------~~~~~--~~-l~ell-~ 192 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSR-SRK--SWPGVE---------------SYVGR--EE-LRAFL-N 192 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCC--CCTTCE---------------EEESH--HH-HHHHH-H
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcC-Cch--hhhhhh---------------hhccc--CC-HHHHH-h
Confidence 468999999999999999999999999999975433 211 011110 00000 11 33444 3
Q ss_pred CceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc
Q psy8194 300 PCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~ 348 (428)
+|||++-|.. .+.|+.+....++ -.+++..+-+++ .. ...+.|++..|.
T Consensus 193 ~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 249 (315)
T 3pp8_A 193 QTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLK 249 (315)
T ss_dssp TCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCcc
Confidence 7899887754 4466666666664 468899998886 43 345788877664
No 112
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.60 E-value=0.0097 Score=60.43 Aligned_cols=110 Identities=14% Similarity=0.309 Sum_probs=68.6
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceecc--CCCccc
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN--DSKEFW 297 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~--~~~~il 297 (428)
++.|++|.|+|+|.+|+.+++.|...|+ +|+ ++|. +.+++.+..++.| +..++ +..+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~-v~~r----------~~~ra~~la~~~g-------~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVL-VANR----------TYERAVELARDLG-------GEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEE-EECS----------SHHHHHHHHHHHT-------CEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEE-EEeC----------CHHHHHHHHHHcC-------CceecHHhHHHHh
Confidence 5789999999999999999999999998 664 7773 4455545544433 12221 012233
Q ss_pred ccCceEEeccccc--cccccccccc-c------cceEEEecCCCCC--CHHHHHHHHHCCCce--eccc
Q psy8194 298 SIPCDILIPAAIE--DQITINNANN-V------TAKIILEGANGPT--TTEADDILRDKGIIL--APDV 353 (428)
Q Consensus 298 ~~~~DIliPaA~~--~~It~~na~~-l------~akiIvegAN~p~--t~ea~~iL~~rGI~v--iPD~ 353 (428)
..+||+|.|+.. ..++.+.... + +-.++++.+. |. +|+. ..-.||.+ +||+
T Consensus 226 -~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~~~l---~~l~~v~l~d~d~l 289 (404)
T 1gpj_A 226 -ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN-PRDVEEGV---ENIEDVEVRTIDDL 289 (404)
T ss_dssp -HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTTG---GGSTTEEEEEHHHH
T ss_pred -cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC-CCCCCccc---cccCCeEEEeHhhH
Confidence 479999999853 2344444443 2 3357788877 53 5432 22346655 5555
No 113
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=96.60 E-value=0.0072 Score=56.76 Aligned_cols=103 Identities=19% Similarity=0.188 Sum_probs=64.6
Q ss_pred ceEEEEeccHHHHHHHHHHHHCC-CEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAG-AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~G-akvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
++|.|+|.|++|+.+++.|.+.| ..| .+.| .+.+.+.++.++.| ....++.++.+ +||+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~----------r~~~~~~~~~~~~g-------~~~~~~~~~~~--~~D~ 60 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRI-YIAN----------RGAEKRERLEKELG-------VETSATLPELH--SDDV 60 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEE-EEEC----------SSHHHHHHHHHHTC-------CEEESSCCCCC--TTSE
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeE-EEEC----------CCHHHHHHHHHhcC-------CEEeCCHHHHh--cCCE
Confidence 47999999999999999999999 776 4777 45666666655432 23333355555 8999
Q ss_pred Eeccccccccccccccccc--ceEEEecCCCCCCHHHHHHHHHCCCce
Q psy8194 304 LIPAAIEDQITINNANNVT--AKIILEGANGPTTTEADDILRDKGIIL 349 (428)
Q Consensus 304 liPaA~~~~It~~na~~l~--akiIvegAN~p~t~ea~~iL~~rGI~v 349 (428)
++-|.....+ .+.+..+. -++|+.-+|+-......+.+. +++.+
T Consensus 61 vi~~v~~~~~-~~v~~~l~~~~~ivv~~~~g~~~~~l~~~~~-~~~~~ 106 (263)
T 1yqg_A 61 LILAVKPQDM-EAACKNIRTNGALVLSVAAGLSVGTLSRYLG-GTRRI 106 (263)
T ss_dssp EEECSCHHHH-HHHHTTCCCTTCEEEECCTTCCHHHHHHHTT-SCCCE
T ss_pred EEEEeCchhH-HHHHHHhccCCCEEEEecCCCCHHHHHHHcC-CCCcE
Confidence 9998863322 33333332 467888766543333334443 35333
No 114
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.60 E-value=0.007 Score=58.73 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
+.|...+++ ..+.++++++++|.|.|.+|+.++..|.+.|++-|.|.+++. ++..++.+ .
T Consensus 101 ~~G~~~~L~----~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~----------~~a~~la~------~ 160 (277)
T 3don_A 101 GIGYVNGLK----QIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTM----------SRFNNWSL------N 160 (277)
T ss_dssp HHHHHHHHH----HHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG----------GGGTTCCS------C
T ss_pred HHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH----------HHHHHHHH------h
Confidence 677776664 457789999999999999999999999999983335777531 11111110 0
Q ss_pred CCCceeccCCCcccccCceEEecccccccccc--c--ccccc-cceEEEecCCCCC-CHHHHHHHHHCCCcee
Q psy8194 284 FNEGEKINDSKEFWSIPCDILIPAAIEDQITI--N--NANNV-TAKIILEGANGPT-TTEADDILRDKGIILA 350 (428)
Q Consensus 284 ~~~~~~i~~~~~il~~~~DIliPaA~~~~It~--~--na~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~vi 350 (428)
+ ....+++..+. -.++||+|-|+.-+.-.. . ....+ ...+|++-.-+|. |+ -.+..+++|+.++
T Consensus 161 ~-~~~~~~~~~~~-~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T~-ll~~A~~~G~~~~ 230 (277)
T 3don_A 161 I-NKINLSHAESH-LDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTP-ILIEAEQRGNPIY 230 (277)
T ss_dssp C-EEECHHHHHHT-GGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSCH-HHHHHHHTTCCEE
T ss_pred c-ccccHhhHHHH-hcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCCH-HHHHHHHCcCEEe
Confidence 0 01111101112 247899998875432111 0 12223 3568999987785 65 4556678998764
No 115
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.60 E-value=0.0034 Score=64.87 Aligned_cols=135 Identities=13% Similarity=0.134 Sum_probs=83.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCC---EEEEEEc----CCCeeeCCCCCCHHHHHHHHHhcCCC
Q psy8194 209 IIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA---KIVAIQD----DKTTIYNPNGFNIPKLQKYVTFTRSI 281 (428)
Q Consensus 209 ~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga---kvVaVsD----~~G~i~n~~GlD~~~l~~~~~~~g~l 281 (428)
.++..+++..|.++++++|+|.|.|..|+.+++.|.+.|+ +| .|+| ++|.++..+ +.+++.++++.....
T Consensus 171 aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I-~vvd~~~~R~G~~~~a~--~~~~L~~~~~~~a~~ 247 (439)
T 2dvm_A 171 AGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENV-RVVELVNGKPRILTSDL--DLEKLFPYRGWLLKK 247 (439)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGE-EEEEEETTEEEECCTTS--CHHHHSTTCHHHHTT
T ss_pred HHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeE-EEEEccCCCcCcccccc--chhHHHHHHHHHhhc
Confidence 4555666677889999999999999999999999999998 55 5888 888766542 212232221111100
Q ss_pred cCCCCceeccCCCcccccCceEEeccccc--cccccccccccc-ceEEEecCCCCCCHHHHHHHHHCCCcee
Q psy8194 282 KDFNEGEKINDSKEFWSIPCDILIPAAIE--DQITINNANNVT-AKIILEGANGPTTTEADDILRDKGIILA 350 (428)
Q Consensus 282 ~~~~~~~~i~~~~~il~~~~DIliPaA~~--~~It~~na~~l~-akiIvegAN~p~t~ea~~iL~~rGI~vi 350 (428)
... .....+..+.+ .++||+|-|+.. +.++++....+. -.+|.+-+|-.-|+-.++.. ++|..++
T Consensus 248 ~~~--~~~~~~L~e~l-~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A~-~~G~~iv 315 (439)
T 2dvm_A 248 TNG--ENIEGGPQEAL-KDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEAK-KAGARIV 315 (439)
T ss_dssp SCT--TCCCSSHHHHH-TTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHHH-HHTCSEE
T ss_pred ccc--ccccccHHHHh-ccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHHH-HcCCeEE
Confidence 000 00001011222 368999999987 888876555553 45888996643344333333 3466554
No 116
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.59 E-value=0.003 Score=62.64 Aligned_cols=105 Identities=20% Similarity=0.294 Sum_probs=69.6
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+.. +. + ++ + ....+ .++++.
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~~~---~~-~---------~~------~--~~~~~-l~ell~- 197 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGATVI-GEDVFEI---KG-I---------ED------Y--CTQVS-LDEVLE- 197 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC---CS-C---------TT------T--CEECC-HHHHHH-
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCcc---HH-H---------Hh------c--cccCC-HHHHHh-
Confidence 46899999999999999999999999999986 5554310 00 0 00 0 11122 344553
Q ss_pred CceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc
Q psy8194 300 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~ 348 (428)
+|||++.|... +.|+.+....++ -.+++.-+-+++ ..+ ..+.|++.+|.
T Consensus 198 ~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~ 254 (331)
T 1xdw_A 198 KSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLG 254 (331)
T ss_dssp HCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCce
Confidence 78999987543 556655555664 357777777774 443 45788887765
No 117
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.58 E-value=0.014 Score=59.66 Aligned_cols=105 Identities=13% Similarity=0.246 Sum_probs=69.8
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+++.|+|+|++|+.+|+.|...|.+|+ +.|.+... ..+ +.+..++.++++
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~-~~d~~~~~----------------~~~------~~~~~~~l~ell- 195 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVY-FYDIENKL----------------PLG------NATQVQHLSDLL- 195 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCCC----------------CCT------TCEECSCHHHHH-
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EEcCCchh----------------ccC------CceecCCHHHHH-
Confidence 457999999999999999999999999999986 55642110 001 122232244555
Q ss_pred cCceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCC
Q psy8194 299 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGI 347 (428)
Q Consensus 299 ~~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI 347 (428)
..||+++-|... +.|+++....++ -.+++..+-+++ ..+ ..+.|++..|
T Consensus 196 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i 252 (404)
T 1sc6_A 196 NMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHL 252 (404)
T ss_dssp HHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSE
T ss_pred hcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCc
Confidence 378999887654 456555555553 457888888875 443 3567877655
No 118
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.58 E-value=0.0026 Score=59.44 Aligned_cols=98 Identities=18% Similarity=0.301 Sum_probs=65.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
+||.|+|+|++|+..++.|.+.|..+++|+|++.. .+ + ..++.++++..++|++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~---~~------------~-----------~~~~~~~l~~~~~DvV 54 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE---HE------------K-----------MVRGIDEFLQREMDVA 54 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC---CT------------T-----------EESSHHHHTTSCCSEE
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc---hh------------h-----------hcCCHHHHhcCCCCEE
Confidence 47999999999999999998899999999996421 00 0 1222455555689999
Q ss_pred ecccccccccccccccc---cceEEEecCCCCCCHHH----HHHHHHCCCce
Q psy8194 305 IPAAIEDQITINNANNV---TAKIILEGANGPTTTEA----DDILRDKGIIL 349 (428)
Q Consensus 305 iPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea----~~iL~~rGI~v 349 (428)
+-|+... .+.+.+... ...+|+|..-.+..+++ .+..+++|+.+
T Consensus 55 v~~~~~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~ 105 (236)
T 2dc1_A 55 VEAASQQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRV 105 (236)
T ss_dssp EECSCHH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCE
T ss_pred EECCCHH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeE
Confidence 9998654 444444332 45677776443334543 34466778874
No 119
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.57 E-value=0.0085 Score=58.55 Aligned_cols=112 Identities=14% Similarity=0.131 Sum_probs=74.0
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCce
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCD 302 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~D 302 (428)
.||+|+|+|++|+..++.|.+. +.++++|+| .|.+.+.+..++.+ .. .++.++++. .++|
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~~~~~~-------~~-~~~~~~~l~~~~~D 65 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVAD----------AFPAAAEAIAGAYG-------CE-VRTIDAIEAAADID 65 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC----------SSHHHHHHHHHHTT-------CE-ECCHHHHHHCTTCC
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEEC----------CCHHHHHHHHHHhC-------CC-cCCHHHHhcCCCCC
Confidence 6899999999999999999885 899999999 67777777766643 22 333566664 4799
Q ss_pred EEecccccccccccccccc---cceEEEecCCCCCCHHHH---HHHHHCCCceeccccc
Q psy8194 303 ILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVIT 355 (428)
Q Consensus 303 IliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~---~iL~~rGI~viPD~la 355 (428)
+++-|+... .+.+.+... ...+++|-.=.....++. +..+++|+.+...+.-
T Consensus 66 ~V~i~tp~~-~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~ 123 (331)
T 4hkt_A 66 AVVICTPTD-THADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNR 123 (331)
T ss_dssp EEEECSCGG-GHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred EEEEeCCch-hHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccc
Confidence 999888543 333333322 446888852111123444 3456788877654433
No 120
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.56 E-value=0.0086 Score=58.66 Aligned_cols=110 Identities=17% Similarity=0.216 Sum_probs=71.5
Q ss_pred CCceEEEEeccHHHHHHHHHHH-H-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-c
Q psy8194 223 INSKISIQGFGNVGSVAANLFF-K-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~-~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~ 299 (428)
+-.+|+|+|+|++|...++.|. + .++++|+|+| .|.+++.+..++.+. ...+++.++++. .
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d----------~~~~~~~~~a~~~g~------~~~~~~~~~~l~~~ 70 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACA----------LDSNQLEWAKNELGV------ETTYTNYKDMIDTE 70 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEEC----------SCHHHHHHHHHTTCC------SEEESCHHHHHTTS
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEec----------CCHHHHHHHHHHhCC------CcccCCHHHHhcCC
Confidence 4579999999999999999887 4 4789999999 677777776665431 123343456665 4
Q ss_pred CceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHHH---HHHC-CCceecc
Q psy8194 300 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADDI---LRDK-GIILAPD 352 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~i---L~~r-GI~viPD 352 (428)
++|+++-|+... .+.+.+... ...+++|- |+ + .++.++ .+++ |+.+...
T Consensus 71 ~~D~V~i~tp~~-~h~~~~~~al~~G~~v~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~~~ 129 (346)
T 3cea_A 71 NIDAIFIVAPTP-FHPEMTIYAMNAGLNVFCEK---PLGLDFNEVDEMAKVIKSHPNQIFQSG 129 (346)
T ss_dssp CCSEEEECSCGG-GHHHHHHHHHHTTCEEEECS---CCCSCHHHHHHHHHHHHTCTTSCEECC
T ss_pred CCCEEEEeCChH-hHHHHHHHHHHCCCEEEEcC---CCCCCHHHHHHHHHHHHhCCCCeEEEe
Confidence 799999987543 333333322 33467753 54 3 344443 3567 8776543
No 121
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.56 E-value=0.0069 Score=59.86 Aligned_cols=113 Identities=13% Similarity=0.131 Sum_probs=74.5
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc-ccC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-SIP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il-~~~ 300 (428)
+..||+|+|+|++|+..++.|.+. ++++++|+| .|.+.+.+..++.+ + ..+++.++++ ..+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d----------~~~~~~~~~~~~~g-~------~~~~~~~~~l~~~~ 66 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYS----------RTEDKREKFGKRYN-C------AGDATMEALLARED 66 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEC----------SSHHHHHHHHHHHT-C------CCCSSHHHHHHCSS
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEEC----------CCHHHHHHHHHHcC-C------CCcCCHHHHhcCCC
Confidence 346899999999999999999886 899999999 67778777766653 1 1223355676 457
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCceeccc
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAPDV 353 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~viPD~ 353 (428)
+|+++-|+... .+.+.+... ...+++|=.=.....++++ ..+++|+.+...+
T Consensus 67 ~D~V~i~tp~~-~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~ 124 (354)
T 3db2_A 67 VEMVIITVPND-KHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGH 124 (354)
T ss_dssp CCEEEECSCTT-SHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CCEEEEeCChH-HHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEee
Confidence 99999887543 334433322 4468888521112234443 4566788765444
No 122
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.54 E-value=0.0085 Score=59.36 Aligned_cols=114 Identities=11% Similarity=0.167 Sum_probs=75.3
Q ss_pred CCCceEEEEeccHHHH-HHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-
Q psy8194 222 IINSKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS- 298 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~- 298 (428)
++-.||+|+|+|++|+ ..++.|.+. ++++++|+| .|.+...+..++.+ ...+++.++++.
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~g-------~~~~~~~~~ll~~ 87 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIAS----------RRWDRAKRFTERFG-------GEPVEGYPALLER 87 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEE----------SSHHHHHHHHHHHC-------SEEEESHHHHHTC
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEc----------CCHHHHHHHHHHcC-------CCCcCCHHHHhcC
Confidence 4568999999999998 688888776 899999999 57777777766653 222343567774
Q ss_pred cCceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCceeccc
Q psy8194 299 IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAPDV 353 (428)
Q Consensus 299 ~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~viPD~ 353 (428)
.++|+++-|+.. ..+.+.+... ...++||=.=.....++++ ..+++|+.+...+
T Consensus 88 ~~~D~V~i~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 147 (350)
T 3rc1_A 88 DDVDAVYVPLPA-VLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENF 147 (350)
T ss_dssp TTCSEEEECCCG-GGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCEEEECCCc-HHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 479999988753 3444443332 4468888522222244543 4567888776444
No 123
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.51 E-value=0.0042 Score=60.73 Aligned_cols=103 Identities=15% Similarity=0.220 Sum_probs=69.8
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
++.|+||.|+|+|++|+.+|+.|...|.+|++ .|.+..- .+ ..+..++.++++ .+
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~-~dr~~~~-----~~------------------~~~~~~~l~ell-~~ 173 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVIA-YTRSSVD-----QN------------------VDVISESPADLF-RQ 173 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCEEEE-ECSSCCC-----TT------------------CSEECSSHHHHH-HH
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcEEEE-Eeccccc-----cc------------------cccccCChHHHh-hc
Confidence 58999999999999999999999999999974 4532110 00 012222134444 37
Q ss_pred ceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc
Q psy8194 301 CDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 348 (428)
Q Consensus 301 ~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~ 348 (428)
|||++-|.. .+.|+.+....++ -.+++.-+-+++ .. +..+.|++++|.
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccce
Confidence 899988765 3456666666663 458888887775 44 446788887764
No 124
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.50 E-value=0.01 Score=58.32 Aligned_cols=100 Identities=18% Similarity=0.306 Sum_probs=65.6
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|.+.. -.. + .+ .+ .++++ .
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~~~-----~~~-------------~-~~-----~~-l~ell-~ 192 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGMRVV-YHARTPK-----PLP-------------Y-PF-----LS-LEELL-K 192 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC-----SSS-------------S-CB-----CC-HHHHH-H
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCCEEE-EECCCCc-----ccc-------------c-cc-----CC-HHHHH-h
Confidence 46899999999999999999999999999986 5554310 000 0 01 11 33444 3
Q ss_pred CceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCC
Q psy8194 300 PCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGI 347 (428)
Q Consensus 300 ~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI 347 (428)
+|||++-|.. .+.|+.+....++ -.+++.-+.+++ ..+ ..+.|+ ..|
T Consensus 193 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i 247 (311)
T 2cuk_A 193 EADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHL 247 (311)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTS
T ss_pred hCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcC
Confidence 7899988853 4556555555553 357777777775 443 456776 544
No 125
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.49 E-value=0.0059 Score=59.57 Aligned_cols=96 Identities=21% Similarity=0.283 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccH-HHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 199 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 199 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
-.+.|.+|+. +++++.+.+++|++++|+|.|+ ||+.+|.+|...|++| .|++++- -|+
T Consensus 139 ~~PcTp~gv~----~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtV-tv~h~~t-------~~L--------- 197 (285)
T 3p2o_A 139 FLPCTPLGVM----KLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATV-SVCHIKT-------KDL--------- 197 (285)
T ss_dssp CCCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEE-EEECTTC-------SCH---------
T ss_pred CCCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeE-EEEeCCc-------hhH---------
Confidence 3578999986 4566678999999999999988 8999999999999996 5887531 010
Q ss_pred cCCCcCCCCceeccCCCcccccCceEEecccc-cccccccccccccceEEEecCCCCC
Q psy8194 278 TRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGPT 334 (428)
Q Consensus 278 ~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~akiIvegAN~p~ 334 (428)
.+ ...++||+|-|+. .+.|+.+-+.. --+|++-+-+++
T Consensus 198 ----------------~~-~~~~ADIVI~Avg~p~~I~~~~vk~--GavVIDVgi~~~ 236 (285)
T 3p2o_A 198 ----------------SL-YTRQADLIIVAAGCVNLLRSDMVKE--GVIVVDVGINRL 236 (285)
T ss_dssp ----------------HH-HHTTCSEEEECSSCTTCBCGGGSCT--TEEEEECCCEEC
T ss_pred ----------------HH-HhhcCCEEEECCCCCCcCCHHHcCC--CeEEEEeccCcc
Confidence 11 1247899988875 55777765532 236666665553
No 126
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.48 E-value=0.005 Score=57.91 Aligned_cols=105 Identities=12% Similarity=0.127 Sum_probs=67.3
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+++.|.+.|..| .+.| .+.+.+.++.++.| ....++.++.+. +||++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v-~~~~----------~~~~~~~~~~~~~g-------~~~~~~~~~~~~-~~D~V 64 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHEL-IISG----------SSLERSKEIAEQLA-------LPYAMSHQDLID-QVDLV 64 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEE-EEEC----------SSHHHHHHHHHHHT-------CCBCSSHHHHHH-TCSEE
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeE-EEEC----------CCHHHHHHHHHHcC-------CEeeCCHHHHHh-cCCEE
Confidence 58999999999999999999999765 6788 46666666655433 112222334443 89999
Q ss_pred ecccccccccccccccc-cceEEEecCCCCCCHHHHHHHHHCCCcee
Q psy8194 305 IPAAIEDQITINNANNV-TAKIILEGANGPTTTEADDILRDKGIILA 350 (428)
Q Consensus 305 iPaA~~~~It~~na~~l-~akiIvegAN~p~t~ea~~iL~~rGI~vi 350 (428)
+-|.... ...+.+..+ .-++|++-+++-...+..+.+ .++..++
T Consensus 65 i~~v~~~-~~~~v~~~l~~~~~vv~~~~~~~~~~l~~~~-~~~~~~v 109 (259)
T 2ahr_A 65 ILGIKPQ-LFETVLKPLHFKQPIISMAAGISLQRLATFV-GQDLPLL 109 (259)
T ss_dssp EECSCGG-GHHHHHTTSCCCSCEEECCTTCCHHHHHHHH-CTTSCEE
T ss_pred EEEeCcH-hHHHHHHHhccCCEEEEeCCCCCHHHHHHhc-CCCCCEE
Confidence 9998743 333444444 345888887755433444444 3454333
No 127
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.48 E-value=0.058 Score=51.96 Aligned_cols=126 Identities=18% Similarity=0.159 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCC
Q psy8194 202 ATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSI 281 (428)
Q Consensus 202 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l 281 (428)
--+.|...+++. .+.+ .+++++|.|.|.+|+.++..|.+.|++-|.|.++ +.++..++.++.+.
T Consensus 102 TD~~G~~~~l~~----~~~~-~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nR----------t~~ka~~la~~~~~- 165 (271)
T 1npy_A 102 TDYIAIVKLIEK----YHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYAR----------NVKTGQYLAALYGY- 165 (271)
T ss_dssp HHHHHHHHHHHH----TTCC-TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECS----------CHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHH----hCCC-CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHHHHcCC-
Confidence 346777776643 4554 6789999999999999999999999854468874 45666666554331
Q ss_pred cCCCCceeccCCCcccccCceEEecccccccccc---cc--c--ccc-cceEEEecCCCCCCHHHHHHHHHCCCceecc
Q psy8194 282 KDFNEGEKINDSKEFWSIPCDILIPAAIEDQITI---NN--A--NNV-TAKIILEGANGPTTTEADDILRDKGIILAPD 352 (428)
Q Consensus 282 ~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~---~n--a--~~l-~akiIvegAN~p~t~ea~~iL~~rGI~viPD 352 (428)
...+ ... ..++||+|-|+.-+.... +. . ..+ ..++|++-.-+|....-.+.-+++|..+++.
T Consensus 166 ------~~~~-~~~--~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G~~~i~G 235 (271)
T 1npy_A 166 ------AYIN-SLE--NQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPFIRYAQARGKQTISG 235 (271)
T ss_dssp ------EEES-CCT--TCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCHHHHHHHHTTCEEECH
T ss_pred ------ccch-hhh--cccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCCCEEECC
Confidence 1111 111 247999999997554321 11 1 123 3578999999996324455667899877543
No 128
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.39 E-value=0.056 Score=52.08 Aligned_cols=128 Identities=16% Similarity=0.160 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
+.|...++ ++.|.++++++++|.|.|-.++.++..|.+.|++-|.|+++ +.++..++.+..+. .
T Consensus 109 ~~Gf~~~L----~~~g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nR----------t~~ra~~la~~~~~--~ 172 (269)
T 3tum_A 109 GAGFLGAA----HKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDP----------STARMGAVCELLGN--G 172 (269)
T ss_dssp HHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------CHHHHHHHHHHHHH--H
T ss_pred hHHHHHHH----HHhCCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC----------CHHHHHHHHHHHhc--c
Confidence 66665554 45688999999999999999999999999999866678884 45555555443211 1
Q ss_pred CCCceeccCCCcccccCceEEecccccccccccc-------cccc-cceEEEecCCCCC-CHHHHHHHHHCCCcee
Q psy8194 284 FNEGEKINDSKEFWSIPCDILIPAAIEDQITINN-------ANNV-TAKIILEGANGPT-TTEADDILRDKGIILA 350 (428)
Q Consensus 284 ~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~n-------a~~l-~akiIvegAN~p~-t~ea~~iL~~rGI~vi 350 (428)
++...... ..+. -.++|++|-|+.-+.-+... ...+ ...+|.+-.-+|. ||=. +.-+++|..++
T Consensus 173 ~~~~~~~~-~~~~-~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~P~~T~ll-~~A~~~G~~~~ 245 (269)
T 3tum_A 173 FPGLTVST-QFSG-LEDFDLVANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSPEITPLL-NRARQVGCRIQ 245 (269)
T ss_dssp CTTCEEES-CCSC-STTCSEEEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCSSSSCHHH-HHHHHHTCEEE
T ss_pred CCcceehh-hhhh-hhcccccccCCccccCCCCCCCCChHHHhccCCCcEEEEEccCCCCCHHH-HHHHHCcCEEE
Confidence 22222111 1111 24789999998644322211 1223 2458889999996 6533 34467787665
No 129
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.39 E-value=0.0078 Score=59.14 Aligned_cols=54 Identities=22% Similarity=0.414 Sum_probs=46.1
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccH-HHHHHHHHHHHCCCEEEEEEcC
Q psy8194 198 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 198 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~ 256 (428)
+-.+.|.+|+.. ++++.+.+++|++++|+|.|+ ||+.+|++|...|+.| .|+++
T Consensus 143 ~~~PcTp~gv~~----lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtV-tv~~~ 197 (300)
T 4a26_A 143 PFTPCTAKGVIV----LLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATV-TIVHS 197 (300)
T ss_dssp SCCCHHHHHHHH----HHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEE-EEECT
T ss_pred CCCCCCHHHHHH----HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeE-EEEeC
Confidence 345789999765 456678999999999999987 8999999999999996 58885
No 130
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=96.34 E-value=0.0061 Score=58.27 Aligned_cols=109 Identities=20% Similarity=0.168 Sum_probs=68.0
Q ss_pred CceEEEEeccHHHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 301 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~ 301 (428)
-++|.|+|+|++|+.+++.|.+. |.+| .+.| .+.+.+.+..+ .|.. ....++.++.+ .+|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V-~~~d----------~~~~~~~~~~~-~g~~-----~~~~~~~~~~~-~~a 67 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKI-VGYN----------RSDRSRDIALE-RGIV-----DEATADFKVFA-ALA 67 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEE-EEEC----------SSHHHHHHHHH-TTSC-----SEEESCTTTTG-GGC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEE-EEEc----------CCHHHHHHHHH-cCCc-----ccccCCHHHhh-cCC
Confidence 36899999999999999999887 5676 4667 45566655443 2211 02222244444 489
Q ss_pred eEEeccccccccccccc----cc-c-cceEEEecCCCCC--CHHHHHHHHHCCCceec
Q psy8194 302 DILIPAAIEDQITINNA----NN-V-TAKIILEGANGPT--TTEADDILRDKGIILAP 351 (428)
Q Consensus 302 DIliPaA~~~~It~~na----~~-l-~akiIvegAN~p~--t~ea~~iL~~rGI~viP 351 (428)
|+++-|.....+ .+.+ +. + .-.+|+..+|.+. +....+.|.++++.++|
T Consensus 68 DvVilavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~ 124 (290)
T 3b1f_A 68 DVIILAVPIKKT-IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVG 124 (290)
T ss_dssp SEEEECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred CEEEEcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEE
Confidence 999999876554 2222 22 3 2357887777654 23334455444787877
No 131
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.32 E-value=0.0082 Score=58.59 Aligned_cols=96 Identities=14% Similarity=0.210 Sum_probs=68.1
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccH-HHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 199 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 199 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
-.+.|.+|+.. ++++.+.+++|++++|.|.|+ ||+.+|.+|...|++| .|+.++- -|++
T Consensus 140 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtV-tv~hs~T-------~~L~-------- 199 (286)
T 4a5o_A 140 LRPCTPKGIMT----LLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTV-TVTHRFT-------RDLA-------- 199 (286)
T ss_dssp SCCHHHHHHHH----HHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEE-EEECTTC-------SCHH--------
T ss_pred CCCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeE-EEEeCCC-------cCHH--------
Confidence 35789999755 566678999999999999987 9999999999999997 4776421 0111
Q ss_pred cCCCcCCCCceeccCCCcccccCceEEecccc-cccccccccccccceEEEecCCCCC
Q psy8194 278 TRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGPT 334 (428)
Q Consensus 278 ~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~akiIvegAN~p~ 334 (428)
+ ...++||+|-|.. .+.|+.+.+.. --+|++-+-+|+
T Consensus 200 -----------------~-~~~~ADIVI~Avg~p~~I~~~~vk~--GavVIDvgi~~~ 237 (286)
T 4a5o_A 200 -----------------D-HVSRADLVVVAAGKPGLVKGEWIKE--GAIVIDVGINRQ 237 (286)
T ss_dssp -----------------H-HHHTCSEEEECCCCTTCBCGGGSCT--TCEEEECCSCSS
T ss_pred -----------------H-HhccCCEEEECCCCCCCCCHHHcCC--CeEEEEeccccc
Confidence 1 1237788888775 55777765522 236677665553
No 132
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.31 E-value=0.091 Score=54.07 Aligned_cols=184 Identities=17% Similarity=0.174 Sum_probs=100.6
Q ss_pred hCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC----------CCCc
Q psy8194 218 INLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD----------FNEG 287 (428)
Q Consensus 218 ~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~----------~~~~ 287 (428)
++...+-++|+|+|.|.||..+|..|.+ |..|+ +.| +|.+++.++.+..-.+.. ..+.
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~-~~D----------~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l 97 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVV-ALD----------IVQAKVDMLNQKISPIVDKEIQEYLAEKPLNF 97 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEE-EEC----------SCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCE
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEE-EEe----------cCHHHhhHHhccCCccccccHHHHHhhccCCe
Confidence 3445566799999999999999999988 99986 667 666666665432111100 0011
Q ss_pred eeccCCCcccccCceEEecccccccccc--------------cccccc--cceEEEecCCCC-CCHHHHHHHHHCCCcee
Q psy8194 288 EKINDSKEFWSIPCDILIPAAIEDQITI--------------NNANNV--TAKIILEGANGP-TTTEADDILRDKGIILA 350 (428)
Q Consensus 288 ~~i~~~~~il~~~~DIliPaA~~~~It~--------------~na~~l--~akiIvegAN~p-~t~ea~~iL~~rGI~vi 350 (428)
+..+|.++.+ .+||++|-|..++.-.. .-++ + .+-+|.+..-.| +|.+..+.|.+.++.+.
T Consensus 98 ~~ttd~~ea~-~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v~~s 175 (432)
T 3pid_A 98 RATTDKHDAY-RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNVIFS 175 (432)
T ss_dssp EEESCHHHHH-TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCEEEC
T ss_pred EEEcCHHHHH-hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccEeec
Confidence 2222122222 47999999876553111 1111 2 233444444444 35666778888999999
Q ss_pred ccccccccchhhh--------------HHHHHhhc-c------c--CCC-CH--HH----HHHHHHHHHHHHHHHHHHHH
Q psy8194 351 PDVITNAGGVIVS--------------YFEWVQNL-S------N--LLW-TE--QE----INLRLNNIICNAFDAIWELA 400 (428)
Q Consensus 351 PD~laNaGGVi~s--------------~~E~~qn~-~------~--~~w-~~--e~----v~~~l~~~m~~~~~~v~~~a 400 (428)
|.++. -|..+.. .++-+..+ . + ... +. .+ +..-+.......++++...|
T Consensus 176 Pe~~~-~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 176 PEFLR-EGRALYDNLHPSRIVIGERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CCCCC-TTSHHHHHHSCSCEEESSCSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCC-cchhhhcccCCceEEecCCHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98863 3332111 11111110 0 0 001 11 11 12223333345678999999
Q ss_pred HhcCCCHHHHHHHHHH
Q psy8194 401 NTKKVSLRTAAFIIGC 416 (428)
Q Consensus 401 ~~~~~~~r~aA~~~a~ 416 (428)
++.|+++.+....++.
T Consensus 255 e~~GiD~~~v~~~~~~ 270 (432)
T 3pid_A 255 ESQGLNSKQIIEGVCL 270 (432)
T ss_dssp HHTTCCHHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHcc
Confidence 9999999988776653
No 133
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.30 E-value=0.008 Score=58.71 Aligned_cols=96 Identities=19% Similarity=0.218 Sum_probs=67.4
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccH-HHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 199 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 199 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
-.+.|..|+.. ++++++.+++|++++|+|.|+ ||+.+|++|...|++| .|++++- -|+.
T Consensus 138 ~~PcTp~gi~~----ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtV-tv~hs~t-------~~L~-------- 197 (288)
T 1b0a_A 138 LRPCTPRGIVT----LLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTT-TVTHRFT-------KNLR-------- 197 (288)
T ss_dssp SCCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEE-EEECSSC-------SCHH--------
T ss_pred CCCCcHHHHHH----HHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeE-EEEeCCc-------hhHH--------
Confidence 35789888654 455678999999999999997 7999999999999997 4777421 0111
Q ss_pred cCCCcCCCCceeccCCCcccccCceEEecccc-cccccccccccccceEEEecCCCCC
Q psy8194 278 TRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGPT 334 (428)
Q Consensus 278 ~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~akiIvegAN~p~ 334 (428)
+ ...++||+|-|.. .+.|+.+-+.. --+|++-+-+++
T Consensus 198 -----------------~-~~~~ADIVI~Avg~p~lI~~~~vk~--GavVIDVgi~r~ 235 (288)
T 1b0a_A 198 -----------------H-HVENADLLIVAVGKPGFIPGDWIKE--GAIVIDVGINRL 235 (288)
T ss_dssp -----------------H-HHHHCSEEEECSCCTTCBCTTTSCT--TCEEEECCCEEC
T ss_pred -----------------H-HhccCCEEEECCCCcCcCCHHHcCC--CcEEEEccCCcc
Confidence 1 1136788888876 55777766531 236666665554
No 134
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=96.29 E-value=0.013 Score=57.75 Aligned_cols=113 Identities=18% Similarity=0.230 Sum_probs=73.0
Q ss_pred CCCceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
...+++.|+|.|..|+..++.|.+ .+.+.|.|.| .+.++..++.++.+.. .. ... .++.++.+ +
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~----------r~~~~a~~la~~~~~~-~~-~~~-~~~~~e~v--~ 187 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYD----------VREKAAKKFVSYCEDR-GI-SAS-VQPAEEAS--R 187 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEEC----------SSHHHHHHHHHHHHHT-TC-CEE-ECCHHHHT--S
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEEC----------CCHHHHHHHHHHHHhc-Cc-eEE-ECCHHHHh--C
Confidence 367899999999999999998877 4666678888 5677777766542210 01 122 33244555 7
Q ss_pred ceEEecccccc--cccccccccccceEEEecCCCCCCHHHHHHHHHCCCcee
Q psy8194 301 CDILIPAAIED--QITINNANNVTAKIILEGANGPTTTEADDILRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~--~It~~na~~l~akiIvegAN~p~t~ea~~iL~~rGI~vi 350 (428)
+||++-|+... +++.+.. +=.+-+++.|+..|-..|.+..+.+++..|+
T Consensus 188 aDvVi~aTp~~~pv~~~~~l-~~G~~V~~ig~~~p~~~el~~~~~~~a~v~v 238 (322)
T 1omo_A 188 CDVLVTTTPSRKPVVKAEWV-EEGTHINAIGADGPGKQELDVEILKKAKIVV 238 (322)
T ss_dssp SSEEEECCCCSSCCBCGGGC-CTTCEEEECSCCSTTCCCBCHHHHHTEEEEE
T ss_pred CCEEEEeeCCCCceecHHHc-CCCeEEEECCCCCCCccccCHHHHhcCeEEE
Confidence 99999998743 2222111 1145678888998876665544556665444
No 135
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.28 E-value=0.0079 Score=59.40 Aligned_cols=108 Identities=13% Similarity=0.153 Sum_probs=73.8
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-c
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~ 299 (428)
+-.||+|+|+|++|+..++.|.+. +.++++|+| .|.+.+.+..++.+ ...++|.++++. .
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d----------~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCD----------IDPAALKAAVERTG-------ARGHASLTDMLAQT 74 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEEC----------SSHHHHHHHHHHHC-------CEEESCHHHHHHHC
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEc----------CCHHHHHHHHHHcC-------CceeCCHHHHhcCC
Confidence 457899999999999999999886 799999999 67788877776654 233443567775 5
Q ss_pred CceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHHCCCceec
Q psy8194 300 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILAP 351 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~---iL~~rGI~viP 351 (428)
++|+++-|+... .+.+.+... ...+++|= |+ | .++.+ ..+++|+.+..
T Consensus 75 ~~D~V~i~tp~~-~h~~~~~~al~~gk~v~~EK---P~a~~~~~~~~l~~~a~~~g~~~~v 131 (354)
T 3q2i_A 75 DADIVILTTPSG-LHPTQSIECSEAGFHVMTEK---PMATRWEDGLEMVKAADKAKKHLFV 131 (354)
T ss_dssp CCSEEEECSCGG-GHHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCEEEECCCcH-HHHHHHHHHHHCCCCEEEeC---CCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 899999887544 333333322 44677875 43 3 34443 45567776653
No 136
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.26 E-value=0.0094 Score=58.54 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=71.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCce
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCD 302 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~D 302 (428)
.||+|+|+|++|+..++.|.+. +.++++|+| .|.+.+.+..++.+ ...+++.+++++ .++|
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~g-------~~~~~~~~~~l~~~~~D 67 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIAD----------PFIEGAQRLAEANG-------AEAVASPDEVFARDDID 67 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC----------SSHHHHHHHHHTTT-------CEEESSHHHHTTCSCCC
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEEC----------CCHHHHHHHHHHcC-------CceeCCHHHHhcCCCCC
Confidence 6899999999999999999885 789999999 67777777766543 233343566664 5799
Q ss_pred EEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCceecc
Q psy8194 303 ILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAPD 352 (428)
Q Consensus 303 IliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~viPD 352 (428)
+++-|+... .+.+.+... +..+++|-.=.....++.+ ..+++|+.+...
T Consensus 68 ~V~i~tp~~-~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 68 GIVIGSPTS-THVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp EEEECSCGG-GHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred EEEEeCCch-hhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 999887543 333333322 3457887521111234443 345567665543
No 137
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.25 E-value=0.0076 Score=59.20 Aligned_cols=111 Identities=9% Similarity=0.092 Sum_probs=68.8
Q ss_pred ceEEEEeccHHHH-HHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCc
Q psy8194 225 SKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPC 301 (428)
Q Consensus 225 ~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~ 301 (428)
.||.|+|+|++|+ +.+..|.+. +++|+||+| .|.++..+..++.+- ...++|.+++|+ .++
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d----------~~~~~a~~~a~~~g~------~~~y~d~~ell~~~~i 87 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIAS----------RDLTRAREMADRFSV------PHAFGSYEEMLASDVI 87 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEEC----------SSHHHHHHHHHHHTC------SEEESSHHHHHHCSSC
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEEC----------CCHHHHHHHHHHcCC------CeeeCCHHHHhcCCCC
Confidence 6999999999997 467777764 799999999 688888888777652 123343556664 467
Q ss_pred eEEecccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHHCCCceecc
Q psy8194 302 DILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILAPD 352 (428)
Q Consensus 302 DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~i---L~~rGI~viPD 352 (428)
|+++=|+.. ..+.+.+... ..-++||=.=.....|++++ .+++|+.+...
T Consensus 88 DaV~I~tP~-~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~ 143 (350)
T 4had_A 88 DAVYIPLPT-SQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEA 143 (350)
T ss_dssp SEEEECSCG-GGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEEC
T ss_pred CEEEEeCCC-chhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEe
Confidence 888777643 3333333222 34566764222223444443 34456655443
No 138
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.25 E-value=0.0069 Score=60.13 Aligned_cols=106 Identities=17% Similarity=0.181 Sum_probs=68.2
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+.. +. + + .+ ....+ .++++
T Consensus 140 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~~~---~~-~---------~------~~--~~~~~-l~ell- 195 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVI-AYDPYPM---KG-D---------H------PD--FDYVS-LEDLF- 195 (333)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC---SS-C---------C------TT--CEECC-HHHHH-
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCcc---hh-h---------H------hc--cccCC-HHHHH-
Confidence 357899999999999999999999999999986 5554310 00 0 0 00 11222 44455
Q ss_pred cCceEEecccccc-----ccccccccccc-ceEEEecCCCCC-CHH-HHHHHHHCCCc
Q psy8194 299 IPCDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 348 (428)
Q Consensus 299 ~~~DIliPaA~~~-----~It~~na~~l~-akiIvegAN~p~-t~e-a~~iL~~rGI~ 348 (428)
..|||++-|...+ .|+.+....++ -.+++.-+-+++ ..+ ..+.|++.+|.
T Consensus 196 ~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 196 KQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp HHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCcc
Confidence 3789999887543 34444444453 356677666664 444 45778877664
No 139
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=96.20 E-value=0.016 Score=57.94 Aligned_cols=117 Identities=15% Similarity=0.148 Sum_probs=76.0
Q ss_pred CCCceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC--ceeccCCCcccc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE--GEKINDSKEFWS 298 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~--~~~i~~~~~il~ 298 (428)
...++++|+|.|..|+..++.|.. .+.+-|.|.| .+.++..++.++... +++ ....++.++.+
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~----------r~~~~a~~la~~~~~---~~g~~~~~~~~~~eav- 192 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYD----------TDPLATAKLIANLKE---YSGLTIRRASSVAEAV- 192 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEEC----------SSHHHHHHHHHHHTT---CTTCEEEECSSHHHHH-
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEc----------CCHHHHHHHHHHHHh---ccCceEEEeCCHHHHH-
Confidence 467899999999999999887654 5666667888 577777777665322 112 22233233444
Q ss_pred cCceEEecccccc----cccccccccccceEEEecCCCCCCHHHHHHHHHCCCceecccc
Q psy8194 299 IPCDILIPAAIED----QITINNANNVTAKIILEGANGPTTTEADDILRDKGIILAPDVI 354 (428)
Q Consensus 299 ~~~DIliPaA~~~----~It~~na~~l~akiIvegAN~p~t~ea~~iL~~rGI~viPD~l 354 (428)
.+|||++-|+... ++..+... =.+-+++.|+..|-..|.+..+.+++..|+ |..
T Consensus 193 ~~aDiVi~aTps~~~~pvl~~~~l~-~G~~V~~vgs~~p~~~El~~~~~~~a~v~v-D~~ 250 (350)
T 1x7d_A 193 KGVDIITTVTADKAYATIITPDMLE-PGMHLNAVGGDCPGKTELHADVLRNARVFV-EYE 250 (350)
T ss_dssp TTCSEEEECCCCSSEEEEECGGGCC-TTCEEEECSCCBTTBEEECHHHHHTSEEEE-SSH
T ss_pred hcCCEEEEeccCCCCCceecHHHcC-CCCEEEECCCCCCCceeeCHHHHhcCcEEE-CCH
Confidence 3799999999754 33332221 245688889998876666555667776444 543
No 140
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=96.20 E-value=0.047 Score=54.27 Aligned_cols=43 Identities=23% Similarity=0.459 Sum_probs=35.2
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 276 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~ 276 (428)
.||+|.|||-+|+.+++.|.++...|++|.|. .|++.+..+.+
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~evvaind~---------~~~~~~a~ll~ 43 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGVEVALINDL---------TDNKTLAHLLK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECS---------SCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCEEEEEecC---------CCHHHHhHhhh
Confidence 47999999999999999988778999999993 37766655544
No 141
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.19 E-value=0.14 Score=52.78 Aligned_cols=179 Identities=15% Similarity=0.117 Sum_probs=100.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC-------------ceecc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE-------------GEKIN 291 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~-------------~~~i~ 291 (428)
++|+|+|.|.||..+|..|.+.|..|+ +.| .|.+++.++.+..-.+ ..|+ .+..+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~-~~D----------~~~~~v~~l~~g~~~i-~e~gl~~~l~~~~~~~~l~~t~ 70 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVR-CID----------TDRNKIEQLNSGTIPI-YEPGLEKMIARNVKAGRLRFGT 70 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHTCSCC-CSTTHHHHHHHHHHTTSEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEE-EEE----------CCHHHHHHHHcCCCcc-cCCCHHHHHHhhcccCcEEEEC
Confidence 689999999999999999999999986 677 6777766665421111 0111 11112
Q ss_pred CCCcccccCceEEeccccccc----------cc---ccccccc-cceEEEecCCCCC--CHHHHHHHHHC----------
Q psy8194 292 DSKEFWSIPCDILIPAAIEDQ----------IT---INNANNV-TAKIILEGANGPT--TTEADDILRDK---------- 345 (428)
Q Consensus 292 ~~~~il~~~~DIliPaA~~~~----------It---~~na~~l-~akiIvegAN~p~--t~ea~~iL~~r---------- 345 (428)
+.++.+ .+||++|-|..... +. .+-++.+ .-++|+.-.-.|. +.+..+++.++
T Consensus 71 d~~ea~-~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~ 149 (450)
T 3gg2_A 71 EIEQAV-PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDF 149 (450)
T ss_dssp CHHHHG-GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CHHHHH-hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcce
Confidence 122222 47999998876542 11 1111222 2345555555443 34455566553
Q ss_pred CCceecccccc--------------ccchhhhHHHHHhhcccCCC---------CHH------HHHHHHHHHHHHHHHHH
Q psy8194 346 GIILAPDVITN--------------AGGVIVSYFEWVQNLSNLLW---------TEQ------EINLRLNNIICNAFDAI 396 (428)
Q Consensus 346 GI~viPD~laN--------------aGGVi~s~~E~~qn~~~~~w---------~~e------~v~~~l~~~m~~~~~~v 396 (428)
.+..-|.++.. .||---..+|.++.+..... +.. -+..-+.......++++
T Consensus 150 ~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~ 229 (450)
T 3gg2_A 150 DIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDV 229 (450)
T ss_dssp EEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23455665432 12221234555554432111 111 12233444556778899
Q ss_pred HHHHHhcCCCHHHHHHHHHH
Q psy8194 397 WELANTKKVSLRTAAFIIGC 416 (428)
Q Consensus 397 ~~~a~~~~~~~r~aA~~~a~ 416 (428)
...+++.|+++.+....++.
T Consensus 230 ~~l~~~~Gid~~~v~~~~~~ 249 (450)
T 3gg2_A 230 ANLCERVGADVSMVRLGIGS 249 (450)
T ss_dssp HHHHHHHTCCHHHHHHHHHT
T ss_pred HHHHHHhCCCHHHHHHHHcC
Confidence 99999999999888776653
No 142
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.16 E-value=0.0069 Score=59.40 Aligned_cols=115 Identities=15% Similarity=0.098 Sum_probs=74.0
Q ss_pred CCceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
+-.||+|+|+|++|...++.|.+ .+.++++|+| .|.+...+..++.+.. ...++.++++. .+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~~ 67 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIAS----------RRLENAQKMAKELAIP------VAYGSYEELCKDET 67 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBC----------SSSHHHHHHHHHTTCC------CCBSSHHHHHHCTT
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEe----------CCHHHHHHHHHHcCCC------ceeCCHHHHhcCCC
Confidence 45799999999999999999988 4789999999 4566777766665421 22333556664 57
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCCCHHHH---HHHHHCCCceecccc
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVI 354 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~---~iL~~rGI~viPD~l 354 (428)
+|+++-|+... .+.+.+... ...+++|-.=.....++. +..+++|+.+...+.
T Consensus 68 ~D~V~i~tp~~-~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~ 126 (330)
T 3e9m_A 68 IDIIYIPTYNQ-GHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQK 126 (330)
T ss_dssp CSEEEECCCGG-GHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred CCEEEEcCCCH-HHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEh
Confidence 99999887544 333333322 345888852111123444 345677887765443
No 143
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.10 E-value=0.0029 Score=65.48 Aligned_cols=134 Identities=13% Similarity=0.183 Sum_probs=83.4
Q ss_pred CCceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhc-CC---Cc------CC------C
Q psy8194 223 INSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFT-RS---IK------DF------N 285 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~-g~---l~------~~------~ 285 (428)
+-.||.|+|+|.+|+..++.+.+ .+.+|++|+| .|.+...+..++. |. +. .. .
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D----------~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g 91 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSA----------RRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAG 91 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEEC----------SSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTT
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEe----------CCHHHHHHHHHHhcCCccccccccchhhhhhhhccC
Confidence 55899999999999999988765 4789999999 6777777665543 31 00 00 0
Q ss_pred CceeccCCCccccc-CceEEeccccccccccccccc-c--cceEEEecCCCCCCH----HHHHHHHHCCCceeccccccc
Q psy8194 286 EGEKINDSKEFWSI-PCDILIPAAIEDQITINNANN-V--TAKIILEGANGPTTT----EADDILRDKGIILAPDVITNA 357 (428)
Q Consensus 286 ~~~~i~~~~~il~~-~~DIliPaA~~~~It~~na~~-l--~akiIvegAN~p~t~----ea~~iL~~rGI~viPD~laNa 357 (428)
.....+|.+++++. ++|+++.|+.....+.+.+.. + +..++++ |-+++. +..+.-+++|+.+.+-+-.+
T Consensus 92 ~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~--nk~l~~~eg~eL~~~A~e~Gvvl~~~~gdq- 168 (446)
T 3upl_A 92 KIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM--NVEADVTIGPYLKAQADKQGVIYSLGAGDE- 168 (446)
T ss_dssp CEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEEECTTSH-
T ss_pred CceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec--CcccCHHHHHHHHHHHHHhCCeeeecCCcc-
Confidence 12234435677754 799999998643333333222 2 2334443 555532 23345567899887654222
Q ss_pred cchhhhHHHHHh
Q psy8194 358 GGVIVSYFEWVQ 369 (428)
Q Consensus 358 GGVi~s~~E~~q 369 (428)
-+.+.-.++|.+
T Consensus 169 p~~~~eLv~~a~ 180 (446)
T 3upl_A 169 PSSCMELIEFVS 180 (446)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 355677788887
No 144
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.09 E-value=0.0091 Score=55.19 Aligned_cols=91 Identities=18% Similarity=0.187 Sum_probs=59.8
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
-++|.|+|.|++|+.+|+.|.+.|..|+.+.|. +.+.+.++.++.+. ....+..+. -.++|+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r----------~~~~~~~l~~~~g~-------~~~~~~~~~-~~~aDv 84 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSR----------GPASLSSVTDRFGA-------SVKAVELKD-ALQADV 84 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTT----------CGGGGHHHHHHHTT-------TEEECCHHH-HTTSSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC----------CHHHHHHHHHHhCC-------CcccChHHH-HhcCCE
Confidence 368999999999999999999999998765773 44455555444331 111112223 247899
Q ss_pred Eeccccccccccccccc---ccceEEEecCCCC
Q psy8194 304 LIPAAIEDQITINNANN---VTAKIILEGANGP 333 (428)
Q Consensus 304 liPaA~~~~It~~na~~---l~akiIvegAN~p 333 (428)
++-|.....+. +.+.. ++-++|+..+|+-
T Consensus 85 Vilavp~~~~~-~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 85 VILAVPYDSIA-DIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp EEEESCGGGHH-HHHTTCSCCTTCEEEECCCCB
T ss_pred EEEeCChHHHH-HHHHHhhccCCCEEEEcCCCC
Confidence 99887644332 22222 4557999999875
No 145
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.07 E-value=0.0099 Score=57.04 Aligned_cols=88 Identities=14% Similarity=0.083 Sum_probs=57.9
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCce
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 302 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~D 302 (428)
.-+||++.|+|+||+.+++. . +..+++|.| +..| .+ +....+|.++++. ++|
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~------~k~g--------------el----gv~a~~d~d~lla-~pD 62 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD------RISK--------------DI----PGVVRLDEFQVPS-DVS 62 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC------SSCC--------------CC----SSSEECSSCCCCT-TCC
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe------cccc--------------cc----CceeeCCHHHHhh-CCC
Confidence 45899999999999999998 4 899999888 2222 11 2333444778886 999
Q ss_pred EEecccccccccccccccccc-eEEEecCCCCC-CHHH
Q psy8194 303 ILIPAAIEDQITINNANNVTA-KIILEGANGPT-TTEA 338 (428)
Q Consensus 303 IliPaA~~~~It~~na~~l~a-kiIvegAN~p~-t~ea 338 (428)
+++.||....+.+.-..-|++ +=|+-.+-+.+ .++.
T Consensus 63 ~VVe~A~~~av~e~~~~iL~aG~dvv~~S~gaLad~~l 100 (253)
T 1j5p_A 63 TVVECASPEAVKEYSLQILKNPVNYIIISTSAFADEVF 100 (253)
T ss_dssp EEEECSCHHHHHHHHHHHTTSSSEEEECCGGGGGSHHH
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEcChhhhcCHHH
Confidence 999999777665533333433 33333333443 4443
No 146
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.04 E-value=0.016 Score=56.80 Aligned_cols=169 Identities=13% Similarity=0.030 Sum_probs=93.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCC-CEEEEEEcCCCeeeCCCCCC-HHHHHHHHHhcCCCcCCCCceeccCCCcccccCce
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAG-AKIVAIQDDKTTIYNPNGFN-IPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 302 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~G-akvVaVsD~~G~i~n~~GlD-~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~D 302 (428)
++|.|+|+|++|..+|+.|.+.| .+|+ +.|.+- +-.+ .++..+...+.| . .-++..+.+ .+||
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~-~~dr~~-----~~~~~~~~~~~~~~~~g-------~-~~~s~~e~~-~~aD 89 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLA-AYDLRF-----NDPAASGALRARAAELG-------V-EPLDDVAGI-ACAD 89 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEE-EECGGG-----GCTTTHHHHHHHHHHTT-------C-EEESSGGGG-GGCS
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEE-EEeCCC-----ccccchHHHHHHHHHCC-------C-CCCCHHHHH-hcCC
Confidence 68999999999999999999999 8875 667321 0011 112322222322 1 220244544 4799
Q ss_pred EEecccccccccc---cccccc-cceEEEecCCCCC--CHHHHHHHHHCCCceecccccc-----ccch--hhhH--HHH
Q psy8194 303 ILIPAAIEDQITI---NNANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITN-----AGGV--IVSY--FEW 367 (428)
Q Consensus 303 IliPaA~~~~It~---~na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laN-----aGGV--i~s~--~E~ 367 (428)
|+|-|-....... +-.+.+ .-++|+...+.+. +.+..+.+.++|+.++...+.. .|.. +++. -|.
T Consensus 90 vVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~vgg~~~~~ 169 (317)
T 4ezb_A 90 VVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVAGRRAVE 169 (317)
T ss_dssp EEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEEESTTHHH
T ss_pred EEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEEeCChHHH
Confidence 9999876654432 122223 2457777766542 3455677889999877544432 1110 0000 022
Q ss_pred Hhhc----cc-CC-----CCH----HHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Q psy8194 368 VQNL----SN-LL-----WTE----QEINLRLNNIICNAFDAIWELANTKKVSLR 408 (428)
Q Consensus 368 ~qn~----~~-~~-----w~~----e~v~~~l~~~m~~~~~~v~~~a~~~~~~~r 408 (428)
++.+ .. .. ... .-++.-+...+...+.+.+..+++.|+++.
T Consensus 170 ~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~ 224 (317)
T 4ezb_A 170 VAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTER 224 (317)
T ss_dssp HHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 2211 00 00 111 123344555556778889999999999884
No 147
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.02 E-value=0.023 Score=56.09 Aligned_cols=108 Identities=15% Similarity=0.328 Sum_probs=68.7
Q ss_pred CceEEEEeccHHHHH-HHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 224 NSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 224 g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
-.||+|+|+|.+|+. .++.|.+. +++|++|+| .|.++.. + .+++...++|.+++++ .+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d----------~~~~~~~---~------~~~~~~~~~~~~~ll~~~~ 67 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSS----------SDASKVH---A------DWPAIPVVSDPQMLFNDPS 67 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC----------SCHHHHH---T------TCSSCCEESCHHHHHHCSS
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEEC----------CCHHHHH---h------hCCCCceECCHHHHhcCCC
Confidence 479999999999986 77777665 799999999 4555443 1 2334445554677775 47
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCceec
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAP 351 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~viP 351 (428)
+|+++-|+ .+..+.+.+... ...+++|=.=.....++++ ..+++|+.+..
T Consensus 68 vD~V~i~t-p~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v 123 (352)
T 3kux_A 68 IDLIVIPT-PNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSV 123 (352)
T ss_dssp CCEEEECS-CTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEeC-ChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 99999888 444444443332 3458887421111234443 45567876653
No 148
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.01 E-value=0.018 Score=56.72 Aligned_cols=115 Identities=11% Similarity=0.085 Sum_probs=74.8
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHC--------CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKA--------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDS 293 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~--------GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~ 293 (428)
++..||.|+|+|.+|+.-++.+.+. +++|++|+| .|.+.+.+..++.+- ...++|.
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d----------~~~~~a~~~a~~~g~------~~~~~d~ 67 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCG----------RDAEAVRAAAGKLGW------STTETDW 67 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEEC----------SSHHHHHHHHHHHTC------SEEESCH
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEc----------CCHHHHHHHHHHcCC------CcccCCH
Confidence 4567999999999998877766542 458999999 688888888777642 2334435
Q ss_pred Ccccc-cCceEEecccccccccccccccc---cceEEEecCCCCCCHHHHHH---HH---HCCCceeccc
Q psy8194 294 KEFWS-IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LR---DKGIILAPDV 353 (428)
Q Consensus 294 ~~il~-~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~i---L~---~rGI~viPD~ 353 (428)
+++|+ .++|+++=|+. +..+.+-+... ..-++||=.=.....||+++ .+ ++|+.+...+
T Consensus 68 ~~ll~~~~iDaV~I~tP-~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~ 136 (390)
T 4h3v_A 68 RTLLERDDVQLVDVCTP-GDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGF 136 (390)
T ss_dssp HHHTTCTTCSEEEECSC-GGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHhcCCCCCEEEEeCC-hHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEe
Confidence 66774 47898888774 33444433332 44688885333334577666 33 3677665444
No 149
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=96.01 E-value=0.068 Score=53.26 Aligned_cols=43 Identities=21% Similarity=0.383 Sum_probs=34.7
Q ss_pred ceEEEEeccHHHHHHHHHHHHC---CCEEEEEEcCCCeeeCCCCCCHHHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 276 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~~G~i~n~~GlD~~~l~~~~~ 276 (428)
.||+|.|||-+|+.++|.|.++ ...||+|.|. .|++.+..+.+
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~---------~~~~~~a~ll~ 47 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT---------GGVKQASHLLK 47 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT---------TCHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CCHHHHHHHhc
Confidence 4899999999999999999886 4789999983 47766655544
No 150
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.00 E-value=0.003 Score=53.06 Aligned_cols=33 Identities=21% Similarity=0.483 Sum_probs=28.0
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++++|+|.|+|.+|+.+++.|.+.|.+|+ +.|
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~-~~d 36 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVL-AVD 36 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCE-EEE
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 466789999999999999999999999886 455
No 151
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=95.98 E-value=0.013 Score=57.60 Aligned_cols=109 Identities=20% Similarity=0.200 Sum_probs=70.5
Q ss_pred ceEEEEeccHHHHHHHHHHH-H-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCc
Q psy8194 225 SKISIQGFGNVGSVAANLFF-K-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPC 301 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~-~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~ 301 (428)
.||+|+|+|++|+..++.|. + .+.++++|+| .|.+.+.+..++.+- ....+++.+++++ .++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d----------~~~~~~~~~~~~~g~-----~~~~~~~~~~ll~~~~~ 67 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTD----------VNQEAAQKVVEQYQL-----NATVYPNDDSLLADENV 67 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEEC----------SSHHHHHHHHHHTTC-----CCEEESSHHHHHHCTTC
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEc----------CCHHHHHHHHHHhCC-----CCeeeCCHHHHhcCCCC
Confidence 58999999999999999888 4 5899999999 677887777766541 1233443566765 478
Q ss_pred eEEecccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHHCCCce
Q psy8194 302 DILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIIL 349 (428)
Q Consensus 302 DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~i---L~~rGI~v 349 (428)
|+++-|+. +..+.+.+... ...+++|=.=.....+++++ .+++|+.+
T Consensus 68 D~V~i~tp-~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 68 DAVLVTSW-GPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp CEEEECSC-GGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred CEEEECCC-chhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 99998884 33444433332 34577765222222344433 45567644
No 152
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=95.97 E-value=0.012 Score=57.49 Aligned_cols=109 Identities=11% Similarity=0.156 Sum_probs=73.9
Q ss_pred ceEEEEeccHHHHHHHHHHHHCC---CEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAG---AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~G---akvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
.||+|+|+|++|+..++.|.+.. +++++|+| .|.+...+..++.+.- +.++|.+++++ .+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d----------~~~~~a~~~a~~~~~~------~~~~~~~~ll~~~~ 66 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAA----------RDLSRAKEFAQKHDIP------KAYGSYEELAKDPN 66 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEEC----------SSHHHHHHHHHHHTCS------CEESSHHHHHHCTT
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEc----------CCHHHHHHHHHHcCCC------cccCCHHHHhcCCC
Confidence 58999999999999999887653 58999999 5778887777765421 22333567774 57
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHHCCCceeccc
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILAPDV 353 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~---iL~~rGI~viPD~ 353 (428)
+|+++-|+. +..+.+.+... ...++||= |+ | .|+++ ..+++|+.+...+
T Consensus 67 vD~V~i~tp-~~~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v~~ 124 (334)
T 3ohs_X 67 VEVAYVGTQ-HPQHKAAVMLCLAAGKAVLCEK---PMGVNAAEVREMVTEARSRGLFLMEAI 124 (334)
T ss_dssp CCEEEECCC-GGGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEECCC-cHHHHHHHHHHHhcCCEEEEEC---CCCCCHHHHHHHHHHHHHhCCEEEEEE
Confidence 999998874 44455544332 45688885 54 2 34444 4566788665433
No 153
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.95 E-value=0.014 Score=59.80 Aligned_cols=114 Identities=11% Similarity=0.003 Sum_probs=72.4
Q ss_pred CCCceEEEEeccHHHH-HHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-
Q psy8194 222 IINSKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS- 298 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~- 298 (428)
.+-.+|+|+|+|++|+ ..++.|.+. ++++++|+| .|.+...+..++.+.-. .+...++|.+++++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d----------~~~~~~~~~a~~~g~~~--~~~~~~~~~~~ll~~ 148 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVS----------GNAEKAKIVAAEYGVDP--RKIYDYSNFDKIAKD 148 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEEC----------SCHHHHHHHHHHTTCCG--GGEECSSSGGGGGGC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEc----------CCHHHHHHHHHHhCCCc--ccccccCCHHHHhcC
Confidence 3457999999999997 788888764 689999999 57777777766654210 00112333567775
Q ss_pred cCceEEeccccccccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHHCCCceec
Q psy8194 299 IPCDILIPAAIEDQITINNANN-V--TAKIILEGANGPT--T-TEADD---ILRDKGIILAP 351 (428)
Q Consensus 299 ~~~DIliPaA~~~~It~~na~~-l--~akiIvegAN~p~--t-~ea~~---iL~~rGI~viP 351 (428)
.++|+++-|+... .+.+.+.. + ...+++|= |+ + .++++ ..+++|+.+..
T Consensus 149 ~~vD~V~iatp~~-~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v 206 (433)
T 1h6d_A 149 PKIDAVYIILPNS-LHAEFAIRAFKAGKHVMCEK---PMATSVADCQRMIDAAKAANKKLMI 206 (433)
T ss_dssp TTCCEEEECSCGG-GHHHHHHHHHHTTCEEEECS---SCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEEEcCCch-hHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 4799999988543 33443333 2 33578873 54 3 34443 34567887654
No 154
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.93 E-value=0.016 Score=56.30 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=43.2
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccH-HHHHHHHHHHHCCCEEEEEEcC
Q psy8194 199 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 199 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~ 256 (428)
-.+.|.+|+...++. ++ ++|++++|+|.|+ ||+.+|++|...|++| .|+++
T Consensus 131 ~~PcTp~gv~~lL~~----~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtV-tv~~~ 182 (276)
T 3ngx_A 131 LVPATPRAVIDIMDY----YG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTV-SVCHS 182 (276)
T ss_dssp SCCHHHHHHHHHHHH----HT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEE-EEECT
T ss_pred CCCCcHHHHHHHHHH----hC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeE-EEEeC
Confidence 357899998866554 45 9999999999986 8999999999999997 48875
No 155
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.93 E-value=0.0042 Score=60.44 Aligned_cols=108 Identities=11% Similarity=0.186 Sum_probs=66.1
Q ss_pred CCceEEEEeccHHHHH-HHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 223 INSKISIQGFGNVGSV-AANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~-~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
+-.||+|+|+|++|+. .++.|.+ .+.++++|+|. +.++..+..++.+ + ...++.+++ ..+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~----------~~~~~~~~~~~~g-~------~~~~~~~~l-~~~ 65 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP----------TRAKALPICESWR-I------PYADSLSSL-AAS 65 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS----------SCTTHHHHHHHHT-C------CBCSSHHHH-HTT
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC----------CHHHHHHHHHHcC-C------CccCcHHHh-hcC
Confidence 4579999999999986 8887766 57899999994 3344444444433 1 122323344 668
Q ss_pred ceEEeccccccccccccccc-c--cceEEEecCCCCC--C-HHHH---HHHHHCCCceecc
Q psy8194 301 CDILIPAAIEDQITINNANN-V--TAKIILEGANGPT--T-TEAD---DILRDKGIILAPD 352 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~-l--~akiIvegAN~p~--t-~ea~---~iL~~rGI~viPD 352 (428)
+|+++-|+... .+.+.+.. + ...+++|- |+ + .++. +..+++|+.+...
T Consensus 66 ~D~V~i~tp~~-~h~~~~~~al~~G~~v~~eK---P~~~~~~~~~~l~~~a~~~g~~~~~~ 122 (319)
T 1tlt_A 66 CDAVFVHSSTA-SHFDVVSTLLNAGVHVCVDK---PLAENLRDAERLVELAARKKLTLMVG 122 (319)
T ss_dssp CSEEEECSCTT-HHHHHHHHHHHTTCEEEEES---SSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEeCCch-hHHHHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 99999887543 33333333 2 33578874 43 3 3443 3456678877543
No 156
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=95.92 E-value=0.018 Score=57.01 Aligned_cols=110 Identities=16% Similarity=0.228 Sum_probs=72.9
Q ss_pred CceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPC 301 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~ 301 (428)
-.+|+|+|+|++|+..++.|.+. +.++++|+| .+.++..+..++.+- . +....+++.++++. .++
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d----------~~~~~~~~~a~~~~~-~--~~~~~~~~~~~ll~~~~~ 72 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVAS----------RSLEKAKAFATANNY-P--ESTKIHGSYESLLEDPEI 72 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEEC----------SSHHHHHHHHHHTTC-C--TTCEEESSHHHHHHCTTC
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEc----------CCHHHHHHHHHHhCC-C--CCCeeeCCHHHHhcCCCC
Confidence 46899999999999999988875 789999999 567777777666541 0 11233443566774 479
Q ss_pred eEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHHCCCcee
Q psy8194 302 DILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILA 350 (428)
Q Consensus 302 DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~---iL~~rGI~vi 350 (428)
|+++-|+. +..+.+.+... +..+++|= |+ | .++++ ..+++|+.+.
T Consensus 73 D~V~i~tp-~~~h~~~~~~al~aGk~V~~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 73 DALYVPLP-TSLHVEWAIKAAEKGKHILLEK---PVAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp CEEEECCC-GGGHHHHHHHHHTTTCEEEECS---SCSSSHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEcCC-hHHHHHHHHHHHHCCCeEEEec---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 99999885 44444444332 34578864 54 3 34444 3456788765
No 157
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.86 E-value=0.0089 Score=57.94 Aligned_cols=171 Identities=15% Similarity=0.190 Sum_probs=92.6
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
-++|.|+|+|++|+.+++.|.+.|.+| .+.|. +.+.+.+..+. | ....++.++.+ .+||+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V-~~~~~----------~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~Dv 89 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTV-TVWNR----------TAEKCDLFIQE-G-------ARLGRTPAEVV-STCDI 89 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SGGGGHHHHHT-T-------CEECSCHHHHH-HHCSE
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHHHHHHc-C-------CEEcCCHHHHH-hcCCE
Confidence 368999999999999999999999987 46663 23333333331 1 22222133333 37999
Q ss_pred Eeccccccccccccc-------ccc-cceEEEecCCCCC--CHHHHHHHHHCCCceecccccc------ccc--hh----
Q psy8194 304 LIPAAIEDQITINNA-------NNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITN------AGG--VI---- 361 (428)
Q Consensus 304 liPaA~~~~It~~na-------~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~viPD~laN------aGG--Vi---- 361 (428)
++-|........+.+ +.+ .-++|+...|... ..+..+.+.++|+.++.-.+.+ .|- ++
T Consensus 90 Vi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~ 169 (316)
T 2uyy_A 90 TFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGD 169 (316)
T ss_dssp EEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEEC
T ss_pred EEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCCC
Confidence 999887332222211 223 3468888888542 2233456667788776332221 111 11
Q ss_pred hhHHHHHhhc----cc-CCCCHH--------HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q psy8194 362 VSYFEWVQNL----SN-LLWTEQ--------EINLRLNNIICNAFDAIWELANTKKVSLRTAAFII 414 (428)
Q Consensus 362 ~s~~E~~qn~----~~-~~w~~e--------~v~~~l~~~m~~~~~~v~~~a~~~~~~~r~aA~~~ 414 (428)
-..+++++.+ .. ..+..+ .+...+...+...+.+.+..+++.|+++.++...+
T Consensus 170 ~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~ 235 (316)
T 2uyy_A 170 RGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDIL 235 (316)
T ss_dssp HHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 0112222211 10 111101 12223333345677888888999999886654433
No 158
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.85 E-value=0.03 Score=53.33 Aligned_cols=82 Identities=16% Similarity=0.189 Sum_probs=56.9
Q ss_pred ceEEEEec-cHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCce
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 302 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~D 302 (428)
+||+|.|+ |.+|+.+++.+.+. +..++++.|.. ++.++++..++|
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------------------------~dl~~~~~~~~D 47 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------------------------DPLSLLTDGNTE 47 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------------------------CCTHHHHHTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------------------------CCHHHHhccCCc
Confidence 47999996 99999999998865 89999999853 012234444789
Q ss_pred EEecccccccccccccccc---cceEEEecCCCCCCHHHHHHH
Q psy8194 303 ILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDIL 342 (428)
Q Consensus 303 IliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~iL 342 (428)
++|.++..... .+|+... +..+|++-. + ++++..+.|
T Consensus 48 vvIDfT~p~a~-~~~~~~a~~~g~~~VigTT-G-~~~e~~~~l 87 (245)
T 1p9l_A 48 VVIDFTHPDVV-MGNLEFLIDNGIHAVVGTT-G-FTAERFQQV 87 (245)
T ss_dssp EEEECSCTTTH-HHHHHHHHHTTCEEEECCC-C-CCHHHHHHH
T ss_pred EEEEccChHHH-HHHHHHHHHcCCCEEEcCC-C-CCHHHHHHH
Confidence 99999966554 4444332 567888765 2 666544333
No 159
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=95.84 E-value=0.003 Score=61.42 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=67.8
Q ss_pred CceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPC 301 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~ 301 (428)
-.+|+|+|+|++|+..++.|.+. +.++++|+| .|.+.+.+..++ ....++.+++++ .++
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d----------~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~ 70 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLAS----------SNPDNLALVPPG---------CVIESDWRSVVSAPEV 70 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEE----------SCHHHHTTCCTT---------CEEESSTHHHHTCTTC
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEe----------CCHHHHHHHHhh---------CcccCCHHHHhhCCCC
Confidence 46899999999999999999885 789999999 455544332221 123343567774 589
Q ss_pred eEEeccccccccccccccc-c--cceEEEecCCCCC--CH-HHH---HHHHHCCCceecc
Q psy8194 302 DILIPAAIEDQITINNANN-V--TAKIILEGANGPT--TT-EAD---DILRDKGIILAPD 352 (428)
Q Consensus 302 DIliPaA~~~~It~~na~~-l--~akiIvegAN~p~--t~-ea~---~iL~~rGI~viPD 352 (428)
|+++-|+... .+.+.+.. + ...+++|- |+ +. ++. +..+++|+.+...
T Consensus 71 D~V~i~tp~~-~h~~~~~~al~~Gk~v~~eK---P~~~~~~~~~~l~~~a~~~g~~~~~~ 126 (315)
T 3c1a_A 71 EAVIIATPPA-THAEITLAAIASGKAVLVEK---PLTLDLAEAEAVAAAAKATGVMVWVE 126 (315)
T ss_dssp CEEEEESCGG-GHHHHHHHHHHTTCEEEEES---SSCSCHHHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEEeCChH-HHHHHHHHHHHCCCcEEEcC---CCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 9999988543 33443333 2 23577874 43 33 333 3455678766543
No 160
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.83 E-value=0.011 Score=57.06 Aligned_cols=111 Identities=19% Similarity=0.223 Sum_probs=67.7
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC---EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA---KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga---kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
+.++|.|+|.|++|+.+++.|.+.|. .| .++| .+.+.+.+..++.| ....+++.+.+ .
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V-~v~d----------r~~~~~~~l~~~~g-------i~~~~~~~~~~-~ 62 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRI-CVTN----------RSLDKLDFFKEKCG-------VHTTQDNRQGA-L 62 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGE-EEEC----------SSSHHHHHHHHTTC-------CEEESCHHHHH-S
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeE-EEEe----------CCHHHHHHHHHHcC-------CEEeCChHHHH-h
Confidence 35789999999999999999999997 66 4777 45566666665432 23333233333 4
Q ss_pred CceEEeccccccccccccccc-----ccce-EEEecCCCCCCHHHHHHHHH--CCCceeccc
Q psy8194 300 PCDILIPAAIEDQITINNANN-----VTAK-IILEGANGPTTTEADDILRD--KGIILAPDV 353 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~-----l~ak-iIvegAN~p~t~ea~~iL~~--rGI~viPD~ 353 (428)
+||++|.|.....+. +.+.. ++.+ +|+.-+++-......+.|.. +=|.+.|..
T Consensus 63 ~aDvVilav~p~~~~-~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~ 123 (280)
T 3tri_A 63 NADVVVLAVKPHQIK-MVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNT 123 (280)
T ss_dssp SCSEEEECSCGGGHH-HHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCG
T ss_pred cCCeEEEEeCHHHHH-HHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCC
Confidence 799999998654432 22222 3344 77766655443344444532 224454543
No 161
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.81 E-value=0.022 Score=57.70 Aligned_cols=117 Identities=21% Similarity=0.221 Sum_probs=66.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC---------CCCc-eeccCCC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD---------FNEG-EKINDSK 294 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~---------~~~~-~~i~~~~ 294 (428)
++|+|+|.|.||..+|..|.+ |..|+ +.| .|.+++.++.+....+.+ .++. ...++..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~-~~d----------~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~ 68 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVT-IVD----------ILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSK 68 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEE-EEC----------SCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEE-EEE----------CCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHH
Confidence 479999999999999999998 99875 557 455555555432211100 0000 1112111
Q ss_pred cccccCceEEeccccccc----------cccccccc---cc-ceEEE-ecCCCCCC-HHHHHHHHHCCCceecccc
Q psy8194 295 EFWSIPCDILIPAAIEDQ----------ITINNANN---VT-AKIIL-EGANGPTT-TEADDILRDKGIILAPDVI 354 (428)
Q Consensus 295 ~il~~~~DIliPaA~~~~----------It~~na~~---l~-akiIv-egAN~p~t-~ea~~iL~~rGI~viPD~l 354 (428)
+.+ .+||+++-|..... ...+-+.. ++ -++|+ +..|.|-| .+..+.+.++.|.+.|.++
T Consensus 69 ~~~-~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~~~Pe~~ 143 (402)
T 1dlj_A 69 AAY-KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTDRIIFSPEFL 143 (402)
T ss_dssp HHH-HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCSCEEECCCCC
T ss_pred HHh-cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCCeEEECCccc
Confidence 222 37899998876542 01111111 21 23444 58888854 4445566556777778765
No 162
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.79 E-value=0.11 Score=51.86 Aligned_cols=32 Identities=28% Similarity=0.601 Sum_probs=28.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHC---CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~ 256 (428)
.||+|.|||.+|+.+++.|.+. ...||+|.|.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~ 37 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT 37 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC
Confidence 5899999999999999999886 3899999983
No 163
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.78 E-value=0.15 Score=51.03 Aligned_cols=43 Identities=23% Similarity=0.457 Sum_probs=35.4
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHH
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKY 274 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~ 274 (428)
-.||.|-|||.+|+.++|.+.+.|.+||+|-|.. +|++.+.-+
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~veivainDp~--------~d~~~~a~l 49 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKGVKVVAVNDPF--------IDPEYMVYM 49 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECTT--------CCHHHHHHH
T ss_pred eeEEEEECCChHHHHHHHHHHhCCCEEEEEeCCC--------CChhHhccc
Confidence 4689999999999999999988899999998843 477665433
No 164
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=95.77 E-value=0.021 Score=55.64 Aligned_cols=105 Identities=13% Similarity=0.081 Sum_probs=61.0
Q ss_pred CCceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
+-.||+|+|+|++|+..++.|.+ .+.++++|+|. |.+.+.+ .| +. | .. .+++++ .+
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~----------~~~~~~~----~g-~~-~---~~---~~~l~~~~~ 65 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR----------NPAEVPF----EL-QP-F---RV---VSDIEQLES 65 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CC-TT-S---CE---ESSGGGSSS
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC----------CHHHHHH----cC-CC-c---CC---HHHHHhCCC
Confidence 45799999999999999999987 57899999994 3333322 11 11 1 11 223332 58
Q ss_pred ceEEecccccccccccccccc---cceEEEecCC-CCCCHHH---HHHHHHCCCcee
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGAN-GPTTTEA---DDILRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN-~p~t~ea---~~iL~~rGI~vi 350 (428)
+|+++-|+... .+.+.+... +..+|+|-.- .+...++ .+..++.|+.+.
T Consensus 66 ~DvViiatp~~-~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~ 121 (304)
T 3bio_A 66 VDVALVCSPSR-EVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAV 121 (304)
T ss_dssp CCEEEECSCHH-HHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred CCEEEECCCch-hhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 99999988533 334444332 5567877321 2222233 345566786543
No 165
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.77 E-value=0.032 Score=54.86 Aligned_cols=110 Identities=9% Similarity=0.102 Sum_probs=75.0
Q ss_pred CCCceEEEEecc-HHHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 222 IINSKISIQGFG-NVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 222 l~g~~vaIqGfG-nVG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
-+-.||+|+|+| .+|...++.|.+. ++++++|+| .|.+...+..++.+. ...++|.+++++
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d----------~~~~~~~~~a~~~~~------~~~~~~~~~ll~ 79 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTS----------RTRSHAEEFAKMVGN------PAVFDSYEELLE 79 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEEC----------SSHHHHHHHHHHHSS------CEEESCHHHHHH
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEc----------CCHHHHHHHHHHhCC------CcccCCHHHHhc
Confidence 356899999999 7999888888775 689999999 678888877776542 133343566775
Q ss_pred -cCceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHHH---HHHCCCceec
Q psy8194 299 -IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADDI---LRDKGIILAP 351 (428)
Q Consensus 299 -~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~i---L~~rGI~viP 351 (428)
.++|+++-|+.. ..+.+.+... ...+++|= |+ | .|++++ .+++|+.+..
T Consensus 80 ~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~v 138 (340)
T 1zh8_A 80 SGLVDAVDLTLPV-ELNLPFIEKALRKGVHVICEK---PISTDVETGKKVVELSEKSEKTVYI 138 (340)
T ss_dssp SSCCSEEEECCCG-GGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCCEEEEeCCc-hHHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 479999998853 3344433332 44688884 54 3 455443 4567876653
No 166
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.77 E-value=0.017 Score=56.92 Aligned_cols=49 Identities=14% Similarity=0.123 Sum_probs=35.1
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHH--------CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFK--------AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR 279 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~--------~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g 279 (428)
+++..||+|+|+|.+|+.-++.+.. .+++||||+| .|.+...+..++.+
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d----------~~~~~a~~~a~~~g 78 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAE----------ANAGLAEARAGEFG 78 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC----------C--TTHHHHHHHHT
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC----------CCHHHHHHHHHHhC
Confidence 4677899999999999876655533 3789999999 56666666666654
No 167
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.76 E-value=0.024 Score=57.98 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=30.8
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+.+.+|+|+|+|.+|..+++.+...|++|+ +.|.
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~-v~D~ 221 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVS-ATDV 221 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEcC
Confidence 578999999999999999999999999875 7884
No 168
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.76 E-value=0.094 Score=53.08 Aligned_cols=32 Identities=28% Similarity=0.601 Sum_probs=28.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHC---CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~ 256 (428)
.||+|.|||.+|+.++|.|.+. +..||+|.|.
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~ 37 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT 37 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC
Confidence 5899999999999999999886 3899999983
No 169
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.76 E-value=0.019 Score=56.88 Aligned_cols=111 Identities=18% Similarity=0.259 Sum_probs=70.2
Q ss_pred CCceEEEEeccHHHHH-HHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-c
Q psy8194 223 INSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~ 299 (428)
+-.||+|+|+|++|+. .+..|.+. +++|++|+|. |.+++ .++ |++...++|.++++. .
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~---~~~------~~~~~~~~~~~~ll~~~ 64 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS----------RTEEV---KRD------FPDAEVVHELEEITNDP 64 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS----------CHHHH---HHH------CTTSEEESSTHHHHTCT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC----------CHHHH---Hhh------CCCCceECCHHHHhcCC
Confidence 4479999999999986 67777664 8999999994 55442 222 234455554677775 5
Q ss_pred CceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCceeccc
Q psy8194 300 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAPDV 353 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~viPD~ 353 (428)
++|+++-|+.. ..+.+.+... ...++||=.=.....++++ ..+++|+.+...+
T Consensus 65 ~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~ 123 (358)
T 3gdo_A 65 AIELVIVTTPS-GLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYH 123 (358)
T ss_dssp TCCEEEECSCT-TTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCCEEEEcCCc-HHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEee
Confidence 79999998854 4444443332 4568888422222244543 4556787765433
No 170
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=95.75 E-value=0.014 Score=57.85 Aligned_cols=113 Identities=18% Similarity=0.219 Sum_probs=70.4
Q ss_pred CCCCceEEEEeccHHHHHHHHHHH-H-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFF-K-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~-~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+++-.||+|+|+|++|+..++.|. + .++++++|+| .|.+.+.+..++.+- ....+++.++++.
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d----------~~~~~~~~~a~~~g~-----~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCD----------IVAGRAQAALDKYAI-----EAKDYNDYHDLIN 84 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEEC----------SSTTHHHHHHHHHTC-----CCEEESSHHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEe----------CCHHHHHHHHHHhCC-----CCeeeCCHHHHhc
Confidence 345679999999999999999888 4 5899999999 566666666666541 1233443566765
Q ss_pred -cCceEEecccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHHCCCce
Q psy8194 299 -IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIIL 349 (428)
Q Consensus 299 -~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~i---L~~rGI~v 349 (428)
.++|+++-|+.. ..+.+.+... ...++||=.=.....+++++ .+++|+.+
T Consensus 85 ~~~~D~V~i~tp~-~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 85 DKDVEVVIITASN-EAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp CTTCCEEEECSCG-GGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred CCCCCEEEEcCCc-HHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 478999987743 3344433332 44677775211112344443 35567644
No 171
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.71 E-value=0.0097 Score=56.86 Aligned_cols=123 Identities=10% Similarity=0.060 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 283 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~ 283 (428)
+.|...+++.. ++++ +++|.|.|.+|+.++..|.+.|++-|.|+++ +.++..++.++.+
T Consensus 95 ~~G~~~~l~~~------~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR----------~~~ka~~la~~~~---- 153 (253)
T 3u62_A 95 WVGVVKSLEGV------EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNR----------TIERAKALDFPVK---- 153 (253)
T ss_dssp HHHHHHHTTTC------CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEES----------CHHHHHTCCSSCE----
T ss_pred HHHHHHHHHhc------CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeC----------CHHHHHHHHHHcc----
Confidence 56766666432 4688 9999999999999999999999833457774 4444443332211
Q ss_pred CCCceeccCCCcccccCceEEeccccccccc-cccc--ccc-cceEEEecCCCCCCHHHHHHHHHCCCc-eeccc
Q psy8194 284 FNEGEKINDSKEFWSIPCDILIPAAIEDQIT-INNA--NNV-TAKIILEGANGPTTTEADDILRDKGII-LAPDV 353 (428)
Q Consensus 284 ~~~~~~i~~~~~il~~~~DIliPaA~~~~It-~~na--~~l-~akiIvegAN~p~t~ea~~iL~~rGI~-viPD~ 353 (428)
....++..+. -.++||+|-|+.-+.-. .... ..+ ...+|++-+.+ .|+-..+ .+++|+. ++|..
T Consensus 154 ---~~~~~~~~~~-~~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~Divy~-~T~ll~~-A~~~G~~~~~~Gl 222 (253)
T 3u62_A 154 ---IFSLDQLDEV-VKKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF-DTPLVVK-ARKLGVKHIIKGN 222 (253)
T ss_dssp ---EEEGGGHHHH-HHTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS-CCHHHHH-HHHHTCSEEECTH
T ss_pred ---cCCHHHHHhh-hcCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC-CcHHHHH-HHHCCCcEEECCH
Confidence 1112211122 23799999877532211 0111 112 34688888777 5665443 4467887 76544
No 172
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.70 E-value=0.069 Score=53.55 Aligned_cols=97 Identities=22% Similarity=0.370 Sum_probs=59.3
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHH---HHHHHhcCCCcCCC---------Cce---
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKL---QKYVTFTRSIKDFN---------EGE--- 288 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l---~~~~~~~g~l~~~~---------~~~--- 288 (428)
.+|+|.|||.+|+.++|+|.+. ...||+|.|.. .|++.+ +++...+|.+.+.- +++
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~--------~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~ 89 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPF--------MDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVK 89 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTT--------SCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCC--------CChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEE
Confidence 5999999999999999999886 78999999821 355533 33333334332210 011
Q ss_pred ecc--CCCcc-c-ccCceEEecccccccccccccccc---cce-EEEecC
Q psy8194 289 KIN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 330 (428)
Q Consensus 289 ~i~--~~~~i-l-~~~~DIliPaA~~~~It~~na~~l---~ak-iIvegA 330 (428)
... +++++ | +.+|||++.|+. ...+.+.++.. .|| +|+.+.
T Consensus 90 v~~~~dp~~i~w~~~~vDvV~eatg-~~~s~e~a~~~l~~GakkvVId~p 138 (354)
T 3cps_A 90 VFQAKDPAEIPWGASGAQIVCESTG-VFTTEEKASLHLKGGAKKVIISAP 138 (354)
T ss_dssp EECCSCGGGCCHHHHTCCEEEECSS-SCCSHHHHGGGGTTTCSEEEESSC
T ss_pred EEecCChHHCCcccCCCCEEEECCC-chhhHHHHHHHHHcCCcEEEEeCC
Confidence 111 13333 2 367999999874 44555666555 343 666654
No 173
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.69 E-value=0.02 Score=53.56 Aligned_cols=109 Identities=21% Similarity=0.259 Sum_probs=66.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCC----EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGA----KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~Ga----kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
++|.|+|.|++|+.+++.|.+.|. +| .+.| .+.+++.++.++.| ....+++.+.+ .+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V-~~~~----------r~~~~~~~~~~~~g-------~~~~~~~~e~~-~~ 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQI-ICSD----------LNTANLKNASEKYG-------LTTTTDNNEVA-KN 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGE-EEEC----------SCHHHHHHHHHHHC-------CEECSCHHHHH-HH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeE-EEEe----------CCHHHHHHHHHHhC-------CEEeCChHHHH-Hh
Confidence 589999999999999999999997 76 4777 56677777665443 22223233333 36
Q ss_pred ceEEecccccccccccccc----ccc-ceEEEecCCCCCCHHHHHHHHH--CCCceeccc
Q psy8194 301 CDILIPAAIEDQITINNAN----NVT-AKIILEGANGPTTTEADDILRD--KGIILAPDV 353 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~----~l~-akiIvegAN~p~t~ea~~iL~~--rGI~viPD~ 353 (428)
||+++-|.....+ .+.+. .++ -++|+.-+++-......+.+.. +-+...|+.
T Consensus 64 aDvVilav~~~~~-~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~ 122 (247)
T 3gt0_A 64 ADILILSIKPDLY-ASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNT 122 (247)
T ss_dssp CSEEEECSCTTTH-HHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCG
T ss_pred CCEEEEEeCHHHH-HHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCCh
Confidence 9999998854433 22222 232 3477755554433334444432 234456654
No 174
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=95.69 E-value=0.045 Score=56.65 Aligned_cols=165 Identities=18% Similarity=0.197 Sum_probs=108.9
Q ss_pred HHHHHHhcccCCCCcccCCCCCCCHHHHHHHHHHhhhhcCCcCCceeecccccCCCcCCCCChhHHHHHHHHHHHHHHhC
Q psy8194 140 RYTNEISSIIGLNKDIPAPDVGTDMQIMSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKIN 219 (428)
Q Consensus 140 ~f~~~l~~~iG~~~dipapDvgt~~~~ma~~~d~y~~~~g~~~~~~vtGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g 219 (428)
.+++.+.+-.|. |==+|++... --.+.+.|+.... ..++. +-..-||-=+..++..+++-.|
T Consensus 153 e~v~~~~P~fG~---InlEDf~ap~--af~il~ryr~~~~---ipvFn----------DD~qGTA~V~lAgllnAlki~g 214 (487)
T 3nv9_A 153 EFVQRIQHTFGA---INLEDISQPN--CYKILDVLRESCD---IPVWH----------DDQQGTASVTLAGLLNALKLVK 214 (487)
T ss_dssp HHHHHHGGGCSE---EEECSCCTTH--HHHHHHHHHHHCS---SCEEE----------TTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCCe---ecHhhcCCch--HHHHHHHHHhhcc---CCccc----------cccchHHHHHHHHHHHHHHHhC
Confidence 477777776552 5567887542 2345566765321 11222 3345688888888999999999
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCC---EEEEEEcCCCeeeCCCCCCHHHH------HHHHHhcCCCcCCCCceec
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGA---KIVAIQDDKTTIYNPNGFNIPKL------QKYVTFTRSIKDFNEGEKI 290 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga---kvVaVsD~~G~i~n~~GlD~~~l------~~~~~~~g~l~~~~~~~~i 290 (428)
.++++.||++.|.|..|..+|++|.+.|. +| -++|++|-|+.... |+... .++.+.+. +. ..
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i-~l~D~~Gli~~~R~-~l~~~~~~~~k~~~A~~~n-----~~--~~ 285 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKI-VMFDSKGSLHNGRE-DIKKDTRFYRKWEICETTN-----PS--KF 285 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGE-EEEETTEECCTTCH-HHHHCGGGHHHHHHHHHSC-----TT--CC
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccE-EEEeccccccCCcc-hhhhhcccHHHHHHHHhcc-----cc--cC
Confidence 99999999999999999999999999998 55 59999999996542 22111 11111111 00 01
Q ss_pred cCCCcccccCceEEecccc--cccccccccccccc-eEEEecCCC
Q psy8194 291 NDSKEFWSIPCDILIPAAI--EDQITINNANNVTA-KIILEGANG 332 (428)
Q Consensus 291 ~~~~~il~~~~DIliPaA~--~~~It~~na~~l~a-kiIvegAN~ 332 (428)
.+..+.+. .+||||=++. .+.+|++-+....- .||---+|-
T Consensus 286 ~~L~eav~-~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNP 329 (487)
T 3nv9_A 286 GSIAEACV-GADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANP 329 (487)
T ss_dssp CSHHHHHT-TCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSS
T ss_pred CCHHHHHh-cCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCC
Confidence 11223333 3599999984 58999998888743 567777774
No 175
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.69 E-value=0.02 Score=55.78 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=66.7
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccH-HHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHH
Q psy8194 199 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYV 275 (428)
Q Consensus 199 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~ 275 (428)
-.+.|.+|++..+ ++++.+++|++++|+|.|+ ||+.+|++|.+. |++|. |++++- -|
T Consensus 137 ~~PcTp~gi~~ll----~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVt-v~h~~t-------~~-------- 196 (281)
T 2c2x_A 137 PLPCTPRGIVHLL----RRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVT-LCHTGT-------RD-------- 196 (281)
T ss_dssp CCCHHHHHHHHHH----HHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEE-EECTTC-------SC--------
T ss_pred CCCChHHHHHHHH----HHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEE-EEECch-------hH--------
Confidence 3578988866554 4568899999999999997 699999999999 89874 776421 00
Q ss_pred HhcCCCcCCCCceeccCCCcccccCceEEecccc-cccccccccccccceEEEecCCCC
Q psy8194 276 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGP 333 (428)
Q Consensus 276 ~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~-~~~It~~na~~l~akiIvegAN~p 333 (428)
..+ ...++||+|-|.. .+.|+.+-+.. --+|++-+-++
T Consensus 197 -----------------L~~-~~~~ADIVI~Avg~p~~I~~~~vk~--GavVIDVgi~r 235 (281)
T 2c2x_A 197 -----------------LPA-LTRQADIVVAAVGVAHLLTADMVRP--GAAVIDVGVSR 235 (281)
T ss_dssp -----------------HHH-HHTTCSEEEECSCCTTCBCGGGSCT--TCEEEECCEEE
T ss_pred -----------------HHH-HHhhCCEEEECCCCCcccCHHHcCC--CcEEEEccCCC
Confidence 011 1247899998886 55787776543 23666655544
No 176
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=95.66 E-value=0.031 Score=54.35 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=67.6
Q ss_pred ceEEEEeccHHHH-HHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCce
Q psy8194 225 SKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 302 (428)
Q Consensus 225 ~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~D 302 (428)
.||+|+|+|++|+ ..++.|.+. +.+++ |+| .|.+++.+..++.+. .. ...+ ..+.+..++|
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d----------~~~~~~~~~a~~~g~-~~----~~~~-~~~~l~~~~D 65 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCT----------RNPKVLGTLATRYRV-SA----TCTD-YRDVLQYGVD 65 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EEC----------SCHHHHHHHHHHTTC-CC----CCSS-TTGGGGGCCS
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEe----------CCHHHHHHHHHHcCC-Cc----cccC-HHHHhhcCCC
Confidence 5899999999998 488888764 78998 999 577777777666541 10 0122 3444466899
Q ss_pred EEecccccccccccccc-ccc--ceEEEecCCCCC--C-HHHH---HHHHHCCCceec
Q psy8194 303 ILIPAAIEDQITINNAN-NVT--AKIILEGANGPT--T-TEAD---DILRDKGIILAP 351 (428)
Q Consensus 303 IliPaA~~~~It~~na~-~l~--akiIvegAN~p~--t-~ea~---~iL~~rGI~viP 351 (428)
+++-|+... .+.+.+. -++ ..+++|- |+ + .++. +..+++|+.+..
T Consensus 66 ~V~i~tp~~-~h~~~~~~al~~Gk~V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v 119 (323)
T 1xea_A 66 AVMIHAATD-VHSTLAAFFLHLGIPTFVDK---PLAASAQECENLYELAEKHHQPLYV 119 (323)
T ss_dssp EEEECSCGG-GHHHHHHHHHHTTCCEEEES---CSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEECCch-hHHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHhcCCeEEE
Confidence 999988643 3344332 232 2477874 53 3 3343 345567876653
No 177
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.66 E-value=0.011 Score=54.30 Aligned_cols=105 Identities=15% Similarity=0.200 Sum_probs=63.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc----ccC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW----SIP 300 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il----~~~ 300 (428)
++|+|.|+|.+|+.+|+.|.+.|..|+ +.| -|.+.+.++.++.+...-+.++ + ..+.| -.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~-vid----------~~~~~~~~l~~~~~~~~i~gd~---~-~~~~l~~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVV-IIN----------KDRELCEEFAKKLKATIIHGDG---S-HKEILRDAEVSK 65 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEE-EEE----------SCHHHHHHHHHHSSSEEEESCT---T-SHHHHHHHTCCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEE----------CCHHHHHHHHHHcCCeEEEcCC---C-CHHHHHhcCccc
Confidence 479999999999999999999999987 556 4677776665443210000000 1 11222 237
Q ss_pred ceEEecccccccccc---cccccc-c-ceEEEecCCCCCCHHHHHHHHHCCCc
Q psy8194 301 CDILIPAAIEDQITI---NNANNV-T-AKIILEGANGPTTTEADDILRDKGII 348 (428)
Q Consensus 301 ~DIliPaA~~~~It~---~na~~l-~-akiIvegAN~p~t~ea~~iL~~rGI~ 348 (428)
||+++-|......|. ..+.++ . .++|+- +|.+ +-.+.|++-|+-
T Consensus 66 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~-~~~~---~~~~~l~~~G~d 114 (218)
T 3l4b_C 66 NDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSL-VNDP---GNMEIFKKMGIT 114 (218)
T ss_dssp TCEEEECCSCHHHHHHHHHHHHHTSCCCEEEEC-CCSG---GGHHHHHHHTCE
T ss_pred CCEEEEecCCcHHHHHHHHHHHHHcCCCeEEEE-EeCc---chHHHHHHCCCC
Confidence 999998876554432 334332 2 355553 4433 445667777874
No 178
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.65 E-value=0.016 Score=57.73 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=51.1
Q ss_pred CceEEEEeccHHHHHHHHHHHHC---------CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCC
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKA---------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK 294 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~---------GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~ 294 (428)
..+|+|.|+|+||+.+++.|.+. +.+|++|+|++ ...+.+++ ...+.+|.+
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~~~~~------------------~~~~~~d~~ 62 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKPRAIP------------------QELLRAEPF 62 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSCCSSC------------------GGGEESSCC
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHhhccC------------------cccccCCHH
Confidence 36899999999999999999875 57999999975 12222321 122334467
Q ss_pred cccccCceEEeccccccccccccc
Q psy8194 295 EFWSIPCDILIPAAIEDQITINNA 318 (428)
Q Consensus 295 ~il~~~~DIliPaA~~~~It~~na 318 (428)
+++ ++||++.|+.......+.+
T Consensus 63 ~ll--~iDvVve~t~~~~~a~~~~ 84 (332)
T 2ejw_A 63 DLL--EADLVVEAMGGVEAPLRLV 84 (332)
T ss_dssp CCT--TCSEEEECCCCSHHHHHHH
T ss_pred HHh--CCCEEEECCCCcHHHHHHH
Confidence 777 9999999986554434444
No 179
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.65 E-value=0.013 Score=58.71 Aligned_cols=106 Identities=21% Similarity=0.221 Sum_probs=71.0
Q ss_pred CceEEEEecc-HHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 224 NSKISIQGFG-NVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 224 g~~vaIqGfG-nVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
-.||+|+|+| .+|...+..|.+. ++++++|+| .|.++..+..++.+ ...++|.++++. .+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~g-------~~~~~~~~ell~~~~ 64 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACD----------PNEDVRERFGKEYG-------IPVFATLAEMMQHVQ 64 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEEC----------SCHHHHHHHHHHHT-------CCEESSHHHHHHHSC
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEe----------CCHHHHHHHHHHcC-------CCeECCHHHHHcCCC
Confidence 3689999999 9998888888774 789999999 67777777766653 223343567775 47
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHH---HHHHHCCCcee
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEAD---DILRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~---~iL~~rGI~vi 350 (428)
+|+++-|+... .+.+.+... ...+++|= |+ | .++. +..+++|+.+.
T Consensus 65 vD~V~i~tp~~-~H~~~~~~al~aGk~Vl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 119 (387)
T 3moi_A 65 MDAVYIASPHQ-FHCEHVVQASEQGLHIIVEK---PLTLSRDEADRMIEAVERAGVHLV 119 (387)
T ss_dssp CSEEEECSCGG-GHHHHHHHHHHTTCEEEECS---CCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred CCEEEEcCCcH-HHHHHHHHHHHCCCceeeeC---CccCCHHHHHHHHHHHHHhCCeEE
Confidence 99999887643 344433332 34577774 53 3 3444 34556787654
No 180
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.62 E-value=0.047 Score=53.46 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=60.0
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
+.-++|.|+|+|++|+.+|+.|.+.|. +|+ +.| .+.+.+.+..+ .|.+. ...++.+++.-.
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~-~~d----------r~~~~~~~a~~-~G~~~-----~~~~~~~~~~~~ 93 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYD----------INPESISKAVD-LGIID-----EGTTSIAKVEDF 93 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEE-EEC----------SCHHHHHHHHH-TTSCS-----EEESCTTGGGGG
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEE-EEE----------CCHHHHHHHHH-CCCcc-----hhcCCHHHHhhc
Confidence 445799999999999999999999998 774 677 45666655543 23211 222324441335
Q ss_pred CceEEeccccccccccccccc----c-cceEEEecCCCC
Q psy8194 300 PCDILIPAAIEDQITINNANN----V-TAKIILEGANGP 333 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~----l-~akiIvegAN~p 333 (428)
+||++|-|.....+. +.+.. + .-.+|+.-+...
T Consensus 94 ~aDvVilavp~~~~~-~vl~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 94 SPDFVMLSSPVRTFR-EIAKKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp CCSEEEECSCGGGHH-HHHHHHHHHSCTTCEEEECCSCC
T ss_pred cCCEEEEeCCHHHHH-HHHHHHhhccCCCcEEEECCCCc
Confidence 899999998766543 22222 2 234777755443
No 181
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.61 E-value=0.024 Score=56.16 Aligned_cols=141 Identities=15% Similarity=0.150 Sum_probs=83.0
Q ss_pred CCCChhHHHHHHHHHHH--HHH---hCCCCCCceEEEEeccH-HHHHHHHHHHHCCCEEEEEEcCCCe-eeCCCCCCHHH
Q psy8194 198 GRQKATGRGVFIIGSKI--ASK---INLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTT-IYNPNGFNIPK 270 (428)
Q Consensus 198 ~r~~aTg~Gv~~~~~~~--~~~---~g~~l~g~~vaIqGfGn-VG~~~a~~L~~~GakvVaVsD~~G~-i~n~~GlD~~~ 270 (428)
+-.+.|.+|++..++.. .+. +|.++.|++++|+|.|+ ||+.+|++|...|++| .|+|.+.. ++... -
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtV-tv~nR~~~~l~~ra-~---- 219 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATV-YSVDVNNIQKFTRG-E---- 219 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEE-EEECSSEEEEEESC-C----
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEE-EEEeCchHHHHhHH-H----
Confidence 34678998886555442 000 57799999999999997 6999999999999996 58886532 22111 0
Q ss_pred HHHHHHhcCCCcCCCC-ceec--cCCCccc--ccCceEEecccc-cc-cccccccccccceEEEecCCCC-CCHHHHHHH
Q psy8194 271 LQKYVTFTRSIKDFNE-GEKI--NDSKEFW--SIPCDILIPAAI-ED-QITINNANNVTAKIILEGANGP-TTTEADDIL 342 (428)
Q Consensus 271 l~~~~~~~g~l~~~~~-~~~i--~~~~~il--~~~~DIliPaA~-~~-~It~~na~~l~akiIvegAN~p-~t~ea~~iL 342 (428)
+ +..... .+.+ ++.+++- -.++||+|-|+. .+ +|+.+-+.. ..+|+.-+-.+ +.+++.
T Consensus 220 ------~---la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk~--GavVIDVgi~rD~d~~v~--- 285 (320)
T 1edz_A 220 ------S---LKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKE--GAVCINFACTKNFSDDVK--- 285 (320)
T ss_dssp ------C---SSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCT--TEEEEECSSSCCBCGGGG---
T ss_pred ------H---HhhhcccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHHcCC--CeEEEEcCCCcccchhHH---
Confidence 0 000000 1111 0002222 247999999887 34 488887643 35777777655 334332
Q ss_pred HHCCCceeccccccccchhhh
Q psy8194 343 RDKGIILAPDVITNAGGVIVS 363 (428)
Q Consensus 343 ~~rGI~viPD~laNaGGVi~s 363 (428)
++--.+-|- .|-++++
T Consensus 286 -~~a~~itPv----VGpmT~a 301 (320)
T 1edz_A 286 -EKASLYVPM----TGKVTIA 301 (320)
T ss_dssp -TTEEEEESC----CHHHHHH
T ss_pred -hhCCeeCCC----ccHHHHH
Confidence 233335563 4555553
No 182
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.61 E-value=0.35 Score=50.31 Aligned_cols=33 Identities=36% Similarity=0.356 Sum_probs=28.8
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC-CC-EEEEEEcC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA-GA-KIVAIQDD 256 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~-Ga-kvVaVsD~ 256 (428)
.-++|+|+|.|.||..+|..|.+. |. .|+ +.|.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~-~~D~ 51 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVL-GFQR 51 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEE-EECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEE-EEEC
Confidence 346899999999999999999999 99 986 5673
No 183
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.59 E-value=0.0057 Score=60.62 Aligned_cols=95 Identities=19% Similarity=0.228 Sum_probs=57.2
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcC-CCc-CCCCc---------eeccC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR-SIK-DFNEG---------EKIND 292 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g-~l~-~~~~~---------~~i~~ 292 (428)
.||+|.|||.+|+.+++.|.+. +.++++|+|.+ .+.+.+..+..| ++. .|++. ....+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~----------~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d 72 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK----------PDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGT 72 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS----------CSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCB
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC----------HHHHHHHHHhcCccccccccccceeccCCceEEcCc
Confidence 5899999999999999999875 68999999953 223333333222 110 01100 11112
Q ss_pred CCcccccCceEEecccccccccccccccc---cceEEEecCC
Q psy8194 293 SKEFWSIPCDILIPAAIEDQITINNANNV---TAKIILEGAN 331 (428)
Q Consensus 293 ~~~il~~~~DIliPaA~~~~It~~na~~l---~akiIvegAN 331 (428)
.++++. ++|+++.|+.. ..+.+.+... .+++|+|+..
T Consensus 73 ~~~l~~-~vDvV~~aTp~-~~h~~~a~~~l~aGk~Vi~sap~ 112 (334)
T 2czc_A 73 LNDLLE-KVDIIVDATPG-GIGAKNKPLYEKAGVKAIFQGGE 112 (334)
T ss_dssp HHHHHT-TCSEEEECCST-THHHHHHHHHHHHTCEEEECTTS
T ss_pred HHHhcc-CCCEEEECCCc-cccHHHHHHHHHcCCceEeeccc
Confidence 345554 89999999853 3333444332 5778887654
No 184
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.58 E-value=0.022 Score=55.59 Aligned_cols=115 Identities=14% Similarity=0.135 Sum_probs=68.9
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 301 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~ 301 (428)
.-++|.|+|+|++|..+|+.|.+.|. .| .+.|.+- +.+.+....+ .| ....++..+.+ .+|
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V-~~~dr~~--------~~~~~~~~~~-~g-------~~~~~~~~e~~-~~a 84 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDM-AAYDAAS--------AESWRPRAEE-LG-------VSCKASVAEVA-GEC 84 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEE-EEECSSC--------HHHHHHHHHH-TT-------CEECSCHHHHH-HHC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeE-EEEcCCC--------CHHHHHHHHH-CC-------CEEeCCHHHHH-hcC
Confidence 34789999999999999999999998 66 4777320 1334433333 22 23333233333 479
Q ss_pred eEEecccccccccc---cccccc-cceEEEecCCCCC--CHHHHHHHHHC--CCceeccccc
Q psy8194 302 DILIPAAIEDQITI---NNANNV-TAKIILEGANGPT--TTEADDILRDK--GIILAPDVIT 355 (428)
Q Consensus 302 DIliPaA~~~~It~---~na~~l-~akiIvegAN~p~--t~ea~~iL~~r--GI~viPD~la 355 (428)
||+|-|.......+ +-.+.+ .-++|+....... +.+..+.+.++ |+.++.-.+.
T Consensus 85 DvVi~~vp~~~~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~ 146 (312)
T 3qsg_A 85 DVIFSLVTAQAALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVM 146 (312)
T ss_dssp SEEEECSCTTTHHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred CEEEEecCchhHHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEecccc
Confidence 99999887655432 112223 2357777655442 33445677788 8887654343
No 185
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.57 E-value=0.29 Score=50.36 Aligned_cols=179 Identities=15% Similarity=0.162 Sum_probs=93.9
Q ss_pred ceEEEEeccHHHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC-----C------CCceecc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD-----F------NEGEKIN 291 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~-----~------~~~~~i~ 291 (428)
++|+|+|.|.||..+|..|.+. |.+|+ +.| .|.+++.++.+..-.+.. + .+....+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~-~~d----------~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~ 74 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVT-VVD----------VNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFST 74 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EEC----------SCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEES
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEE----------CCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEEC
Confidence 5899999999999999999998 78875 567 455555544221100000 0 0112212
Q ss_pred CCCcccccCceEEecccccccccc------------------ccccccc-ceEEEecCCCCC--CHHHHHHHHHCCC---
Q psy8194 292 DSKEFWSIPCDILIPAAIEDQITI------------------NNANNVT-AKIILEGANGPT--TTEADDILRDKGI--- 347 (428)
Q Consensus 292 ~~~~il~~~~DIliPaA~~~~It~------------------~na~~l~-akiIvegAN~p~--t~ea~~iL~~rGI--- 347 (428)
+.++.+ .+||+++-|.....-.. +-++.++ -++|+.-.+.|. +.+..++|.+.+.
T Consensus 75 ~~~e~~-~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~ 153 (467)
T 2q3e_A 75 NIDDAI-KEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNL 153 (467)
T ss_dssp CHHHHH-HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTC
T ss_pred CHHHHH-hcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCC
Confidence 122222 37999998864332110 1112232 246666545553 3445567877653
Q ss_pred ----ceecccccc--------------ccc----hhhhHHHHHhhcccC------CC--CH------HHHHHHHHHHHHH
Q psy8194 348 ----ILAPDVITN--------------AGG----VIVSYFEWVQNLSNL------LW--TE------QEINLRLNNIICN 391 (428)
Q Consensus 348 ----~viPD~laN--------------aGG----Vi~s~~E~~qn~~~~------~w--~~------e~v~~~l~~~m~~ 391 (428)
..-|..+.. .|| ..-..+|.++.+-.. .+ +. .-+...+...+..
T Consensus 154 d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia 233 (467)
T 2q3e_A 154 NLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRIS 233 (467)
T ss_dssp EEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHH
Confidence 233444321 233 111224444332211 01 11 1122233334456
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHH
Q psy8194 392 AFDAIWELANTKKVSLRTAAFIIG 415 (428)
Q Consensus 392 ~~~~v~~~a~~~~~~~r~aA~~~a 415 (428)
.++++...+++.|+++.+....+.
T Consensus 234 ~~nE~~~l~~~~Gid~~~v~~~~~ 257 (467)
T 2q3e_A 234 SINSISALCEATGADVEEVATAIG 257 (467)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHc
Confidence 778899999999999988766554
No 186
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.55 E-value=0.015 Score=56.82 Aligned_cols=108 Identities=14% Similarity=0.169 Sum_probs=67.8
Q ss_pred CCceEEEEeccHHHH-HHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGFGNVGS-VAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~-~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
+-.||+|+|+|++|. ..++.|...++++++|+|. |.++..+..++.+. ...++|.+++++ .+
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~----------~~~~~~~~a~~~~~------~~~~~~~~~ll~~~~ 66 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES----------DSDNRAKFTSLFPS------VPFAASAEQLITDAS 66 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS----------CTTSCHHHHHHSTT------CCBCSCHHHHHTCTT
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC----------CHHHHHHHHHhcCC------CcccCCHHHHhhCCC
Confidence 457999999999996 5677777789999999994 44445555555432 223333556775 47
Q ss_pred ceEEeccccccccccccccc-c--cceEEEecCCCCC--C-HHHHH---HHHHCCCcee
Q psy8194 301 CDILIPAAIEDQITINNANN-V--TAKIILEGANGPT--T-TEADD---ILRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~-l--~akiIvegAN~p~--t-~ea~~---iL~~rGI~vi 350 (428)
+|+++-|+... .+.+.+.. + ..-+++|= |+ | .++++ ..+++|+.+.
T Consensus 67 ~D~V~i~tp~~-~h~~~~~~al~aGkhVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 67 IDLIACAVIPC-DRAELALRTLDAGKDFFTAK---PPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp CCEEEECSCGG-GHHHHHHHHHHTTCEEEECS---SCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred CCEEEEeCChh-hHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 99999887543 33443332 2 33478873 54 3 34444 3456787665
No 187
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.53 E-value=0.0089 Score=61.22 Aligned_cols=111 Identities=11% Similarity=0.098 Sum_probs=74.1
Q ss_pred CCceEEEEec----cHHHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcc
Q psy8194 223 INSKISIQGF----GNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 296 (428)
Q Consensus 223 ~g~~vaIqGf----GnVG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~i 296 (428)
+-.||+|+|+ |.+|...++.|.+. +++||+|+| .|.+++.+..++.+. +.....+|.+++
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d----------~~~~~~~~~a~~~g~----~~~~~~~~~~~l 84 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYS----------PKIETSIATIQRLKL----SNATAFPTLESF 84 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEEC----------SSHHHHHHHHHHTTC----TTCEEESSHHHH
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEe----------CCHHHHHHHHHHcCC----CcceeeCCHHHH
Confidence 4579999999 99999889888886 789999999 677777777766541 222334435677
Q ss_pred cc-cCceEEeccccccccccccccc-c--c------ceEEEecCCCCC--C-HHHHH---HHHHCCCceec
Q psy8194 297 WS-IPCDILIPAAIEDQITINNANN-V--T------AKIILEGANGPT--T-TEADD---ILRDKGIILAP 351 (428)
Q Consensus 297 l~-~~~DIliPaA~~~~It~~na~~-l--~------akiIvegAN~p~--t-~ea~~---iL~~rGI~viP 351 (428)
++ .++|+++-|+... .+.+.+.. + . ..++||= |+ | .++.+ ..+++|+.+..
T Consensus 85 l~~~~vD~V~i~tp~~-~H~~~~~~al~aG~~~~~~khVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~v 151 (438)
T 3btv_A 85 ASSSTIDMIVIAIQVA-SHYEVVMPLLEFSKNNPNLKYLFVEW---ALACSLDQAESIYKAAAERGVQTII 151 (438)
T ss_dssp HHCSSCSEEEECSCHH-HHHHHHHHHHHHGGGCTTCCEEEEES---SCCSSHHHHHHHHHHHHTTTCEEEE
T ss_pred hcCCCCCEEEEeCCcH-HHHHHHHHHHHCCCCcccceeEEecC---cccCCHHHHHHHHHHHHHcCCeEEE
Confidence 75 4799999988543 33333332 2 3 3488883 54 3 34443 45667876653
No 188
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=95.52 E-value=0.024 Score=56.29 Aligned_cols=110 Identities=13% Similarity=0.105 Sum_probs=69.3
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-c
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 299 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~ 299 (428)
++..+|+|+|+|++|...++.|.+. ++++++|+| .|.+++.. .++.+ ...++|.++++. .
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~-a~~~g-------~~~~~~~~~ll~~~ 64 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFD----------ILAEKREA-AAQKG-------LKIYESYEAVLADE 64 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC----------SSHHHHHH-HHTTT-------CCBCSCHHHHHHCT
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEc----------CCHHHHHH-HHhcC-------CceeCCHHHHhcCC
Confidence 3557999999999999999988876 789999999 56666542 23322 223343566764 5
Q ss_pred CceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCcee
Q psy8194 300 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILA 350 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~vi 350 (428)
++|+++-|+.. ..+.+.+... ...++||=.=.....++++ ..+++|+.+.
T Consensus 65 ~~D~V~i~tp~-~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (359)
T 3e18_A 65 KVDAVLIATPN-DSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFM 120 (359)
T ss_dssp TCCEEEECSCG-GGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEcCCc-HHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 79999988754 3344433332 4458888521112234443 3456777654
No 189
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.52 E-value=0.022 Score=57.44 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=48.9
Q ss_pred CceEEEEeccHHHHHHHHHHHHC---------CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCC
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKA---------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK 294 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~---------GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~ 294 (428)
..||+|+|+|.+|+.-++.|.+. +++||||+| .|.+.+.+..++.+.- +.++|.+
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d----------~~~~~a~~~a~~~~~~------~~y~d~~ 89 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALAD----------QDQAMAERHAAKLGAE------KAYGDWR 89 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEEC----------SSHHHHHHHHHHHTCS------EEESSHH
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEc----------CCHHHHHHHHHHcCCC------eEECCHH
Confidence 37999999999999888777653 679999999 7888888887776532 2233244
Q ss_pred cccc-cCceEEeccc
Q psy8194 295 EFWS-IPCDILIPAA 308 (428)
Q Consensus 295 ~il~-~~~DIliPaA 308 (428)
++|+ .++|+++=|+
T Consensus 90 ~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 90 ELVNDPQVDVVDITS 104 (412)
T ss_dssp HHHHCTTCCEEEECS
T ss_pred HHhcCCCCCEEEECC
Confidence 5553 3566666554
No 190
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.51 E-value=0.13 Score=51.15 Aligned_cols=32 Identities=28% Similarity=0.698 Sum_probs=28.3
Q ss_pred ceEEEEeccHHHHHHHHHHHHC---CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~ 256 (428)
+||+|.|||-+|+.++|+|.++ ...||+|.|.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~ 35 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL 35 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC
Confidence 4799999999999999998775 5899999983
No 191
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.49 E-value=0.058 Score=50.99 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=57.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+++.|.+.|.+|+ +.| .+.+.+.+.. +.|.. ....++.+++ .+||++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~----------~~~~~~~~~~-~~g~~-----~~~~~~~~~~--~~~D~v 61 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLI-GVS----------RQQSTCEKAV-ERQLV-----DEAGQDLSLL--QTAKII 61 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHH-HTTSC-----SEEESCGGGG--TTCSEE
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHH-hCCCC-----ccccCCHHHh--CCCCEE
Confidence 479999999999999999999999875 557 4556665554 32211 0122324444 689999
Q ss_pred ecccccccccc---ccccccc-ceEEEecCCCC
Q psy8194 305 IPAAIEDQITI---NNANNVT-AKIILEGANGP 333 (428)
Q Consensus 305 iPaA~~~~It~---~na~~l~-akiIvegAN~p 333 (428)
+-|.....+.+ +-.+.++ -++|+..+|.+
T Consensus 62 i~av~~~~~~~~~~~l~~~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 62 FLCTPIQLILPTLEKLIPHLSPTAIVTDVASVK 94 (279)
T ss_dssp EECSCHHHHHHHHHHHGGGSCTTCEEEECCSCC
T ss_pred EEECCHHHHHHHHHHHHhhCCCCCEEEECCCCc
Confidence 99987553221 1122232 35778776643
No 192
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.49 E-value=0.011 Score=58.99 Aligned_cols=94 Identities=13% Similarity=0.228 Sum_probs=56.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC-----------ceeccC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE-----------GEKIND 292 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~-----------~~~i~~ 292 (428)
.||+|.|||.+|+.+++.|.+. +.++++|+|.+ .+.......+.+ +.-|.+ ....++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~----------~~~~~~~a~~~g-~~~~~~~~~~~~~~~~~v~v~~~ 70 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTS----------PNYEAFIAHRRG-IRIYVPQQSIKKFEESGIPVAGT 70 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSS----------CSHHHHHHHHTT-CCEECCGGGHHHHHTTTCCCCCC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCC----------hHHHHHHHHhcC-cceecCcCHHHHhcccccccccC
Confidence 4899999999999999999874 68999999942 222222222211 110100 000010
Q ss_pred CCcccccCceEEeccccccccccccccc---ccceEEEecCC
Q psy8194 293 SKEFWSIPCDILIPAAIEDQITINNANN---VTAKIILEGAN 331 (428)
Q Consensus 293 ~~~il~~~~DIliPaA~~~~It~~na~~---l~akiIvegAN 331 (428)
.++++ .++|+++.|+. ...+.++++. -.+|+|.-+++
T Consensus 71 ~e~l~-~~vDvV~~aTp-~~~s~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 71 VEDLI-KTSDIVVDTTP-NGVGAQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp HHHHH-HHCSEEEECCS-TTHHHHHHHHHHHTTCEEEECTTS
T ss_pred HhHhh-cCCCEEEECCC-CchhHHHHHHHHHcCCeEEEeCCC
Confidence 11222 27999999974 4555556653 36788888887
No 193
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.48 E-value=0.031 Score=54.59 Aligned_cols=109 Identities=16% Similarity=0.196 Sum_probs=63.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCC-CcC--CCC---c-eeccCCCccc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS-IKD--FNE---G-EKINDSKEFW 297 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~-l~~--~~~---~-~~i~~~~~il 297 (428)
++|+|+|.|++|+.+|..|.+.|..|+ +.| -+.+.+.++.++.+. +.+ ++. . ...++.++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~-~~~----------r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVL-AWD----------IDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH
Confidence 689999999999999999999999875 666 355566555554221 101 100 0 1122122333
Q ss_pred ccCceEEeccccccccccccccc----cc-ceEEEecCC-CCCCHHHHHHHHHCC
Q psy8194 298 SIPCDILIPAAIEDQITINNANN----VT-AKIILEGAN-GPTTTEADDILRDKG 346 (428)
Q Consensus 298 ~~~~DIliPaA~~~~It~~na~~----l~-akiIvegAN-~p~t~ea~~iL~~rG 346 (428)
.+||+++-|...... .+-+.. ++ -.+|+.-.| ++-+.+..+.|.++|
T Consensus 74 -~~~D~vi~~v~~~~~-~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~~~~l~~~~ 126 (359)
T 1bg6_A 74 -KDADVILIVVPAIHH-ASIAANIASYISEGQLIILNPGATGGALEFRKILRENG 126 (359)
T ss_dssp -TTCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEESSCCSSHHHHHHHHHHHTT
T ss_pred -hcCCEEEEeCCchHH-HHHHHHHHHhCCCCCEEEEcCCCchHHHHHHHHHHhcC
Confidence 379999998876554 333332 22 234444445 333445456677765
No 194
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.47 E-value=0.014 Score=58.18 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=68.4
Q ss_pred CCceEEEEeccHHHHH-HHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-c
Q psy8194 223 INSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~ 299 (428)
+-.||+|+|+|++|+. .+..|.+. +++|++|+| .|.+++. ++ +++...++|.++++. .
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~~---~~------~~~~~~~~~~~~ll~~~ 66 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVAS----------RDEEKVK---RD------LPDVTVIASPEAAVQHP 66 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC----------SCHHHHH---HH------CTTSEEESCHHHHHTCT
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc----------CCHHHHH---hh------CCCCcEECCHHHHhcCC
Confidence 3478999999999986 77777664 899999999 4555443 22 234455554567775 5
Q ss_pred CceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHH---HHHHHCCCceecc
Q psy8194 300 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEAD---DILRDKGIILAPD 352 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~---~iL~~rGI~viPD 352 (428)
++|+++-|+.. ..+.+.+... ...++||= |+ | .+++ +..+++|+.+...
T Consensus 67 ~~D~V~i~tp~-~~H~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v~ 124 (364)
T 3e82_A 67 DVDLVVIASPN-ATHAPLARLALNAGKHVVVDK---PFTLDMQEARELIALAEEKQRLLSVF 124 (364)
T ss_dssp TCSEEEECSCG-GGHHHHHHHHHHTTCEEEECS---CSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEEeCCh-HHHHHHHHHHHHCCCcEEEeC---CCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 79999998743 4444443332 44678874 43 2 3444 3456778776543
No 195
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.47 E-value=0.022 Score=45.99 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=28.1
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCC-CEEEEEEc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAG-AKIVAIQD 255 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~G-akvVaVsD 255 (428)
.+++|+|.|.|.+|+.+++.|.+.| .+|+ +.|
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~-~~~ 36 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVT-VAD 36 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEE-EEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEE-EEe
Confidence 4679999999999999999999999 7764 666
No 196
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=95.44 E-value=0.13 Score=51.15 Aligned_cols=32 Identities=28% Similarity=0.576 Sum_probs=28.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHC----CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA----GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~----GakvVaVsD~ 256 (428)
.||+|-|||.+|+.++|.|.+. ...||+|.|.
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~ 37 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL 37 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC
Confidence 4899999999999999999887 5799999993
No 197
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.44 E-value=0.011 Score=60.88 Aligned_cols=118 Identities=14% Similarity=0.182 Sum_probs=67.9
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCC---ccccc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK---EFWSI 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~---~il~~ 299 (428)
++++|+|.|.|.+|+.+++.|.+.|++| .++|. +.+++.+..++.+.+.... . .+.+.+ +++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V-~v~~R----------~~~~a~~la~~~~~~~~~~-~-Dv~d~~~l~~~l~- 67 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKV-TVACR----------TLESAKKLSAGVQHSTPIS-L-DVNDDAALDAEVA- 67 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEE-EEEES----------SHHHHHHTTTTCTTEEEEE-C-CTTCHHHHHHHHT-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEE-EEEEC----------CHHHHHHHHHhcCCceEEE-e-ecCCHHHHHHHHc-
Confidence 5689999999999999999999999986 57773 4555544433222110000 0 011111 2333
Q ss_pred CceEEeccccccccccccc-cccc--ceEEEecCCCCCCHHHHHHHHHCCCceeccccc
Q psy8194 300 PCDILIPAAIEDQITINNA-NNVT--AKIILEGANGPTTTEADDILRDKGIILAPDVIT 355 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na-~~l~--akiIvegAN~p~t~ea~~iL~~rGI~viPD~la 355 (428)
++|++|-|+.... +...+ ..++ ..++.+....|.+.+..+..+++|+.+++.+-.
T Consensus 68 ~~DvVIn~a~~~~-~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~ 125 (450)
T 1ff9_A 68 KHDLVISLIPYTF-HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGL 125 (450)
T ss_dssp TSSEEEECCC--C-HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBB
T ss_pred CCcEEEECCcccc-chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCC
Confidence 7999999996432 22111 1122 345666443444444456677899988766544
No 198
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.39 E-value=0.03 Score=57.22 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=73.1
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceecc----CCCcc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN----DSKEF 296 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~----~~~~i 296 (428)
++-.||+|+|+|.+|...++.|.+. +++|++|+| .|.+++.+..++... .+++....++ |.+++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d----------~~~~~~~~~a~~~~~-~g~~~~~~~~~~~~~~~~l 86 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFAD----------PDPYMVGRAQEILKK-NGKKPAKVFGNGNDDYKNM 86 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEC----------SCHHHHHHHHHHHHH-TTCCCCEEECSSTTTHHHH
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEe----------CCHHHHHHHHHHHHh-cCCCCCceeccCCCCHHHH
Confidence 3567999999999999988888774 789999999 677777665542100 0122233343 35677
Q ss_pred cc-cCceEEeccccccccccccccc-c--cceEEEecCCCCC--C-HHHHHH---HHHCCCcee
Q psy8194 297 WS-IPCDILIPAAIEDQITINNANN-V--TAKIILEGANGPT--T-TEADDI---LRDKGIILA 350 (428)
Q Consensus 297 l~-~~~DIliPaA~~~~It~~na~~-l--~akiIvegAN~p~--t-~ea~~i---L~~rGI~vi 350 (428)
++ .++|+++-|+... .+.+.+.. + ..-++|| -|+ | .++.++ .+++|+.+.
T Consensus 87 l~~~~vD~V~i~tp~~-~h~~~~~~al~aGkhV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 87 LKDKNIDAVFVSSPWE-WHHEHGVAAMKAGKIVGME---VSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp TTCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred hcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 75 4799999988643 44444433 2 4468888 454 3 344443 456787654
No 199
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.38 E-value=0.059 Score=51.05 Aligned_cols=102 Identities=18% Similarity=0.179 Sum_probs=61.7
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCce
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 302 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~D 302 (428)
++|.|+|+|++|+.+++.|.+.|. +|+ +.| .+.+.+.... +.|.. ....++.++.+..+||
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d----------~~~~~~~~~~-~~g~~-----~~~~~~~~~~~~~~aD 64 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYD----------INPESISKAV-DLGII-----DEGTTSIAKVEDFSPD 64 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEE-EEC----------SCHHHHHHHH-HTTSC-----SEEESCGGGGGGTCCS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEE-EEe----------CCHHHHHHHH-HCCCc-----ccccCCHHHHhcCCCC
Confidence 479999999999999999999997 764 667 4555555443 33311 0112223344322899
Q ss_pred EEeccccccccccccccc----c-cceEEEecCCCCCC--HHHHHHHHH
Q psy8194 303 ILIPAAIEDQITINNANN----V-TAKIILEGANGPTT--TEADDILRD 344 (428)
Q Consensus 303 IliPaA~~~~It~~na~~----l-~akiIvegAN~p~t--~ea~~iL~~ 344 (428)
+++-|.....+. +.+.. + .-.+|+..+|.+.. ....+.+.+
T Consensus 65 vVilavp~~~~~-~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~ 112 (281)
T 2g5c_A 65 FVMLSSPVRTFR-EIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK 112 (281)
T ss_dssp EEEECSCHHHHH-HHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred EEEEcCCHHHHH-HHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc
Confidence 999998755332 22222 2 23588888887652 223445544
No 200
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.38 E-value=0.019 Score=57.46 Aligned_cols=74 Identities=26% Similarity=0.268 Sum_probs=48.8
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCC---Cccc
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDS---KEFW 297 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~---~~il 297 (428)
.+++++|+|.|+|.+|+.+++.+...|++|+ +.| .+.+++....+..+.- + .....+. ++.+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~-~~d----------~~~~~~~~~~~~~g~~--~--~~~~~~~~~l~~~~ 227 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVT-ILD----------VNHKRLQYLDDVFGGR--V--ITLTATEANIKKSV 227 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHTTTS--E--EEEECCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEE----------CCHHHHHHHHHhcCce--E--EEecCCHHHHHHHH
Confidence 3789999999999999999999999999875 667 4556655544433210 0 0001101 1222
Q ss_pred ccCceEEeccccc
Q psy8194 298 SIPCDILIPAAIE 310 (428)
Q Consensus 298 ~~~~DIliPaA~~ 310 (428)
..+|++|.|+..
T Consensus 228 -~~~DvVi~~~g~ 239 (369)
T 2eez_A 228 -QHADLLIGAVLV 239 (369)
T ss_dssp -HHCSEEEECCC-
T ss_pred -hCCCEEEECCCC
Confidence 378999999863
No 201
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.34 E-value=0.026 Score=56.13 Aligned_cols=113 Identities=11% Similarity=0.182 Sum_probs=74.1
Q ss_pred CCceEEEEeccHHHH-HHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGFGNVGS-VAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~-~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
+-.||+|+|+|.++. ..+..|...++++++|+| .|.+...+..++.+. ...++|.+++++ .+
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d----------~~~~~a~~~a~~~~~------~~~~~~~~~ll~~~~ 88 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHE----------KDDALAAEFSAVYAD------ARRIATAEEILEDEN 88 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEEC----------SCHHHHHHHHHHSSS------CCEESCHHHHHTCTT
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEc----------CCHHHHHHHHHHcCC------CcccCCHHHHhcCCC
Confidence 457999999999985 567777778999999999 688888887776542 233443567775 46
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHHCCCceecc
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILAPD 352 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~i---L~~rGI~viPD 352 (428)
+|+++-|+. +..+.+.+... ...++||=.=.....+++++ .+++|+.+...
T Consensus 89 vD~V~I~tp-~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~ 145 (361)
T 3u3x_A 89 IGLIVSAAV-SSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSIL 145 (361)
T ss_dssp CCEEEECCC-HHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEeCC-hHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 999997774 33444443332 44688886322223455543 45678766543
No 202
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.32 E-value=0.0036 Score=60.55 Aligned_cols=115 Identities=13% Similarity=0.192 Sum_probs=67.8
Q ss_pred CCceEEEEec-cHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCC--CceeccCCCcccc
Q psy8194 223 INSKISIQGF-GNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN--EGEKINDSKEFWS 298 (428)
Q Consensus 223 ~g~~vaIqGf-GnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~--~~~~i~~~~~il~ 298 (428)
+.+||+|.|+ |.+|+.+++.+.+ .|.++++++|....-. .|-|..+ +.+.. +....++.++++.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~--~g~d~~~----------~~g~~~~~v~~~~dl~~~l~ 71 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LGSDAGE----------LAGAGKTGVTVQSSLDAVKD 71 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CSCCTTC----------SSSSSCCSCCEESCSTTTTT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhh--hhhhHHH----------HcCCCcCCceecCCHHHHhc
Confidence 4579999999 9999999998764 6899999999643110 0223211 11111 1222333456665
Q ss_pred cCceEEecccccccccccccccc---cceEEEecCCCCCCHHHHHHHHH----CCCceeccc
Q psy8194 299 IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDILRD----KGIILAPDV 353 (428)
Q Consensus 299 ~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~iL~~----rGI~viPD~ 353 (428)
++|++|.++.+... .+++... +..+|++-. .++++..+.|.+ .++++.|.+
T Consensus 72 -~~DvVIDft~p~~~-~~~~~~a~~~G~~vVigTt--G~~~e~~~~L~~~a~~~~vv~a~N~ 129 (273)
T 1dih_A 72 -DFDVFIDFTRPEGT-LNHLAFCRQHGKGMVIGTT--GFDEAGKQAIRDAAADIAIVFAANF 129 (273)
T ss_dssp -SCSEEEECSCHHHH-HHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHTTTSCEEECSCC
T ss_pred -CCCEEEEcCChHHH-HHHHHHHHhCCCCEEEECC--CCCHHHHHHHHHhcCCCCEEEEecC
Confidence 89999988864432 3333332 567888776 356654444443 355555443
No 203
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.32 E-value=0.049 Score=55.21 Aligned_cols=34 Identities=24% Similarity=0.167 Sum_probs=30.8
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+.+.+|+|+|+|.+|..+++.+...|++|+ +.|.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~-v~D~ 215 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTT-GYDV 215 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEE-EECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEE-EEeC
Confidence 578999999999999999999999999975 7884
No 204
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.30 E-value=0.006 Score=59.62 Aligned_cols=119 Identities=10% Similarity=0.067 Sum_probs=72.0
Q ss_pred CCceEEEEe-ccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 223 INSKISIQG-FGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 223 ~g~~vaIqG-fGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
+-.||+|.| +|++|+.+++.+.+ .+..+|++.|.++. +..|.|+.++... .. .+....+|.++++. +
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~--~~~G~d~gel~G~-------~~-~gv~v~~dl~~ll~-~ 88 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS--SFVDKDASILIGS-------DF-LGVRITDDPESAFS-N 88 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC--TTTTSBGGGGTTC-------SC-CSCBCBSCHHHHTT-S
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc--cccccchHHhhcc-------Cc-CCceeeCCHHHHhc-C
Confidence 447999999 89999999998875 58999999997642 1235555443211 00 12222333456665 8
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCCCHHHHHHH----HHCCCceeccccc
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDIL----RDKGIILAPDVIT 355 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~iL----~~rGI~viPD~la 355 (428)
+||+|.++..... .+|+... +..+|++-. .++++..+.| ++.++++.|.+..
T Consensus 89 aDVvIDFT~p~a~-~~~~~~~l~~Gv~vViGTT--G~~~e~~~~L~~aa~~~~~~~a~N~Si 147 (288)
T 3ijp_A 89 TEGILDFSQPQAS-VLYANYAAQKSLIHIIGTT--GFSKTEEAQIADFAKYTTIVKSGNMSL 147 (288)
T ss_dssp CSEEEECSCHHHH-HHHHHHHHHHTCEEEECCC--CCCHHHHHHHHHHHTTSEEEECSCCCH
T ss_pred CCEEEEcCCHHHH-HHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHHhCcCCEEEECCCcH
Confidence 9999999865443 3444433 556776543 2565433333 3346667666644
No 205
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.29 E-value=0.1 Score=51.79 Aligned_cols=97 Identities=19% Similarity=0.369 Sum_probs=58.7
Q ss_pred ceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHH---hcCCCcCCC---------Ccee--
Q psy8194 225 SKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDFN---------EGEK-- 289 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~---~~g~l~~~~---------~~~~-- 289 (428)
.||+|.|||.+|+.++|.|.+ .+..||+|.|.. .|.+.+..+.+ .+|.+.+.. +++.
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~--------~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~ 75 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPF--------IDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPIT 75 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSS--------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCC--------CCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEE
Confidence 589999999999999999876 579999999831 25555443332 222221100 0111
Q ss_pred -cc--CCCcc-c-ccCceEEecccccccccccccccc---cc-eEEEecC
Q psy8194 290 -IN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TA-KIILEGA 330 (428)
Q Consensus 290 -i~--~~~~i-l-~~~~DIliPaA~~~~It~~na~~l---~a-kiIvegA 330 (428)
+. +++++ | ..++|+++.|+. ...+.+.+... .| +++++++
T Consensus 76 v~~~~d~~~l~~~~~~vDvV~eatg-~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 76 IFQERDPSKIKWGDAGAEYVVESTG-VFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp EECCSSGGGCCTTTTTCCEEEECSS-SCCSHHHHGGGGGGTCSEEEESSC
T ss_pred EEecCCHHHCccccCCCCEEEECCC-chhhHHHHHHHHhCCCeEEEeccC
Confidence 11 24454 4 368999999985 34455555554 33 4556665
No 206
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.27 E-value=0.09 Score=51.37 Aligned_cols=96 Identities=19% Similarity=0.193 Sum_probs=61.9
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC----ceeccCCCcccc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE----GEKINDSKEFWS 298 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~----~~~i~~~~~il~ 298 (428)
...+|.|+|.|++|..++..|.+.|..|. +.| -+.+.+.++.++...+ ..|+ ....+++++ -
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~-~~~----------r~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~--~ 78 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVI-LWA----------RRKEIVDLINVSHTSP-YVEESKITVRATNDLEE--I 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHHSCBT-TBTTCCCCSEEESCGGG--C
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEE-EEe----------CCHHHHHHHHHhCCcc-cCCCCeeeEEEeCCHHH--h
Confidence 45789999999999999999999999874 666 3455666655543222 1121 233332444 3
Q ss_pred cCceEEecccccccccccccccc--cceEEEecCCCC
Q psy8194 299 IPCDILIPAAIEDQITINNANNV--TAKIILEGANGP 333 (428)
Q Consensus 299 ~~~DIliPaA~~~~It~~na~~l--~akiIvegAN~p 333 (428)
.++|+++-|... ....+.+..+ .-++|+.-.|+-
T Consensus 79 ~~aDvVil~vk~-~~~~~v~~~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 79 KKEDILVIAIPV-QYIREHLLRLPVKPSMVLNLSKGI 114 (335)
T ss_dssp CTTEEEEECSCG-GGHHHHHTTCSSCCSEEEECCCCC
T ss_pred cCCCEEEEECCH-HHHHHHHHHhCcCCCEEEEEeCCC
Confidence 489999988764 3333334334 356899999863
No 207
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.26 E-value=0.15 Score=50.84 Aligned_cols=32 Identities=25% Similarity=0.586 Sum_probs=28.7
Q ss_pred ceEEEEeccHHHHHHHHHHHH---C-CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFK---A-GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~---~-GakvVaVsD~ 256 (428)
.||+|.|||.+|+.+++.|.+ . ...||+|.|.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~ 38 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL 38 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC
Confidence 589999999999999999987 4 7899999983
No 208
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.26 E-value=0.34 Score=49.36 Aligned_cols=41 Identities=29% Similarity=0.410 Sum_probs=33.2
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 276 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~ 276 (428)
++|+|+|.|.||..+|..|.+.|.+|+ +.| .|.+++.++.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~-~~d----------~~~~~~~~l~~ 41 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVI-GVD----------VSSTKIDLINQ 41 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHhC
Confidence 479999999999999999999999975 567 56666655543
No 209
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.23 E-value=0.12 Score=51.31 Aligned_cols=32 Identities=31% Similarity=0.538 Sum_probs=28.7
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 256 (428)
.||+|.|||-+|+.++|+|.++ ...||+|.|.
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~ 34 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL 34 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 4899999999999999999876 6899999984
No 210
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.21 E-value=0.16 Score=52.75 Aligned_cols=178 Identities=15% Similarity=0.185 Sum_probs=94.7
Q ss_pred ceEEEEeccHHHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC------------ceec
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE------------GEKI 290 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~------------~~~i 290 (428)
++|+|+|.|.||..+|..|.+. |..|+ +.| .|.+++.++.+..-.+. -++ ....
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~-~~D----------~~~~~v~~l~~g~~~i~-e~gl~~~~~~~~~~~l~~t 77 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVT-VVD----------MNTAKIAEWNSDKLPIY-EPGLDEIVFAARGRNLFFS 77 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EEC----------SCHHHHHHHTSSSCSSC-CTTHHHHHHHHBTTTEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEE----------CCHHHHHHHHCCCCCcC-CCCHHHHHHHhhcCCEEEE
Confidence 5899999999999999999998 68876 567 55666555543110010 011 1111
Q ss_pred cCCCcccccCceEEecccccccc--------------ccc----cccccc-ceEEEe-cCCCCC-CHHHHHHHHH-CC--
Q psy8194 291 NDSKEFWSIPCDILIPAAIEDQI--------------TIN----NANNVT-AKIILE-GANGPT-TTEADDILRD-KG-- 346 (428)
Q Consensus 291 ~~~~~il~~~~DIliPaA~~~~I--------------t~~----na~~l~-akiIve-gAN~p~-t~ea~~iL~~-rG-- 346 (428)
++..+.+ .+||+++-|.....- ..+ -++.++ -++|+. ..+.|- +.+..++|.+ +|
T Consensus 78 ~~~~~~~-~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~ 156 (481)
T 2o3j_A 78 SDIPKAI-AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNN 156 (481)
T ss_dssp SCHHHHH-HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC--
T ss_pred CCHHHHh-hcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcC
Confidence 2112222 379999998643221 011 112222 245554 555554 4455677877 55
Q ss_pred ------Cceeccccccccc----------hhh---------hHHHHHhhccc------CCCC----HHH----HHHHHHH
Q psy8194 347 ------IILAPDVITNAGG----------VIV---------SYFEWVQNLSN------LLWT----EQE----INLRLNN 387 (428)
Q Consensus 347 ------I~viPD~laNaGG----------Vi~---------s~~E~~qn~~~------~~w~----~e~----v~~~l~~ 387 (428)
|..-|.++ ..|. +++ ..+|.++.+.. ..+. ..+ +......
T Consensus 157 ~~~d~~v~~~Pe~~-~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a 235 (481)
T 2o3j_A 157 ENLKFQVLSNPEFL-AEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLA 235 (481)
T ss_dssp --CCEEEEECCCCC-CTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEeCcccc-cccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHH
Confidence 34556544 2222 111 12333332211 1111 111 1222333
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q psy8194 388 IICNAFDAIWELANTKKVSLRTAAFIIGC 416 (428)
Q Consensus 388 ~m~~~~~~v~~~a~~~~~~~r~aA~~~a~ 416 (428)
.....++++...+++.|+++.+....+..
T Consensus 236 ~~ia~~nE~~~la~~~Gid~~~v~~~~~~ 264 (481)
T 2o3j_A 236 QRISSINSISAVCEATGAEISEVAHAVGY 264 (481)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHcc
Confidence 44567888899999999999888766543
No 211
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.18 E-value=0.016 Score=58.40 Aligned_cols=74 Identities=20% Similarity=0.250 Sum_probs=48.6
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCc--CCCCceeccCCCcccc
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK--DFNEGEKINDSKEFWS 298 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~--~~~~~~~i~~~~~il~ 298 (428)
++.+++|+|+|+|.+|+.+++.+...|++|+ +.| .+.+++....+..|.-. .+.. ..+ .++.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~-~~d----------~~~~~l~~~~~~~g~~~~~~~~~--~~~-l~~~l- 229 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVT-VLD----------INIDKLRQLDAEFCGRIHTRYSS--AYE-LEGAV- 229 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHTTTSSEEEECC--HHH-HHHHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHHhcCCeeEeccCC--HHH-HHHHH-
Confidence 4789999999999999999999999999875 667 45566555544333110 0000 001 12223
Q ss_pred cCceEEecccc
Q psy8194 299 IPCDILIPAAI 309 (428)
Q Consensus 299 ~~~DIliPaA~ 309 (428)
..+|++|.|+.
T Consensus 230 ~~aDvVi~~~~ 240 (377)
T 2vhw_A 230 KRADLVIGAVL 240 (377)
T ss_dssp HHCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 37899999874
No 212
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.15 E-value=0.045 Score=56.83 Aligned_cols=110 Identities=10% Similarity=0.127 Sum_probs=73.6
Q ss_pred CCceEEEEec----cHHHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcc
Q psy8194 223 INSKISIQGF----GNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 296 (428)
Q Consensus 223 ~g~~vaIqGf----GnVG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~i 296 (428)
+-.||+|+|+ |.+|...++.|.+. +++|++|+| .|.+...+..++.+ .+....++|.+++
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d----------~~~~~a~~~a~~~g----~~~~~~~~d~~el 103 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYN----------PTLKSSLQTIEQLQ----LKHATGFDSLESF 103 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEEC----------SCHHHHHHHHHHTT----CTTCEEESCHHHH
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEe----------CCHHHHHHHHHHcC----CCcceeeCCHHHH
Confidence 4479999999 99999999988885 789999999 67777777776654 1222344445677
Q ss_pred cc-cCceEEeccccccccccccccc-c--c------ceEEEecCCCCC--C-HHHHH---HHHHCC-Ccee
Q psy8194 297 WS-IPCDILIPAAIEDQITINNANN-V--T------AKIILEGANGPT--T-TEADD---ILRDKG-IILA 350 (428)
Q Consensus 297 l~-~~~DIliPaA~~~~It~~na~~-l--~------akiIvegAN~p~--t-~ea~~---iL~~rG-I~vi 350 (428)
++ .++|+++-|+... .+.+.+.. + . ..++||= |+ | .++++ ..+++| +.+.
T Consensus 104 l~~~~vD~V~I~tp~~-~H~~~~~~al~aG~~~~~~khVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~~ 170 (479)
T 2nvw_A 104 AQYKDIDMIVVSVKVP-EHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQTI 170 (479)
T ss_dssp HHCTTCSEEEECSCHH-HHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEEE
T ss_pred hcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCCcCCceeEEEeC---CCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 75 5799999988533 33433332 2 2 3388874 64 3 34444 345678 7654
No 213
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=95.15 E-value=0.02 Score=56.83 Aligned_cols=106 Identities=15% Similarity=0.147 Sum_probs=69.8
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++.|+++.|+|+|++|+.+|+.+...|.+|++ .|.. . . +.. .+ . +.+..+ .+++|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~-~d~~-------~-~-~~~---~~-~-------~~~~~~-l~ell- 192 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLC-YDVV-------K-R-EDL---KE-K-------GCVYTS-LDELL- 192 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSS-------C-C-HHH---HH-T-------TCEECC-HHHHH-
T ss_pred cceecCcEEEEECcchHHHHHHHhhcccCceeee-cCCc-------c-c-hhh---hh-c-------CceecC-HHHHH-
Confidence 3468999999999999999999999999999974 4432 1 1 111 11 1 122333 45666
Q ss_pred cCceEEecccc-----ccccccccccccc-ceEEEecCCCCC-CHHH-HHHHHHCCC
Q psy8194 299 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-TTEA-DDILRDKGI 347 (428)
Q Consensus 299 ~~~DIliPaA~-----~~~It~~na~~l~-akiIvegAN~p~-t~ea-~~iL~~rGI 347 (428)
..|||++-+.. .+.|+.+...+++ --+++--|=|++ ..+| .+.|++.-|
T Consensus 193 ~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i 249 (334)
T 3kb6_A 193 KESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKF 249 (334)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCE
T ss_pred hhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCc
Confidence 36888877654 3556666666664 457888888886 4444 567766543
No 214
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.09 E-value=0.025 Score=56.41 Aligned_cols=32 Identities=19% Similarity=0.492 Sum_probs=29.1
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 256 (428)
.||+|.|||.+|+.+++.|.+. +..||+|.|.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~ 35 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT 35 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 5899999999999999999876 6899999994
No 215
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.07 E-value=0.012 Score=57.95 Aligned_cols=89 Identities=12% Similarity=0.078 Sum_probs=57.7
Q ss_pred CceEEEEeccHHHHHHHHHHHH--CCCEEEEEEcCCCeeeCCCCCCHHH-HHHHHHhcCCCcCCCCceeccCCCcccc--
Q psy8194 224 NSKISIQGFGNVGSVAANLFFK--AGAKIVAIQDDKTTIYNPNGFNIPK-LQKYVTFTRSIKDFNEGEKINDSKEFWS-- 298 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~--~GakvVaVsD~~G~i~n~~GlD~~~-l~~~~~~~g~l~~~~~~~~i~~~~~il~-- 298 (428)
..||+|+|+|++|+.+++.|.+ .+.++++|+|. |.+. .++..++.+.. ...++.+++++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~----------~~~~~~~~~a~~~g~~------~~~~~~e~ll~~~ 67 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI----------DAASDGLARAQRMGVT------TTYAGVEGLIKLP 67 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECS----------CTTCHHHHHHHHTTCC------EESSHHHHHHHSG
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeC----------ChhhhHHHHHHHcCCC------cccCCHHHHHhcc
Confidence 4789999999999999999965 57899999994 4333 33444443311 11111345554
Q ss_pred --cCceEEecccccccccccccccc-----cceEEEec
Q psy8194 299 --IPCDILIPAAIEDQITINNANNV-----TAKIILEG 329 (428)
Q Consensus 299 --~~~DIliPaA~~~~It~~na~~l-----~akiIveg 329 (428)
.++|+++.|+. +..+.+.+... .+.+|+|-
T Consensus 68 ~~~~iDvV~~atp-~~~h~~~a~~al~a~~Gk~Vi~ek 104 (312)
T 1nvm_B 68 EFADIDFVFDATS-ASAHVQNEALLRQAKPGIRLIDLT 104 (312)
T ss_dssp GGGGEEEEEECSC-HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCCCcEEEECCC-hHHHHHHHHHHHHhCCCCEEEEcC
Confidence 36899999987 55666655553 34566644
No 216
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=95.06 E-value=0.027 Score=55.27 Aligned_cols=93 Identities=19% Similarity=0.202 Sum_probs=58.7
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 301 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~ 301 (428)
+-.||+|+|+|++|+..++.|.+. +.++++|+|.+..- .+ . + +....++.++++ .++
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~----~~---------------~-~-gv~~~~d~~~ll-~~~ 59 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL----DT---------------K-T-PVFDVADVDKHA-DDV 59 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC----SS---------------S-S-CEEEGGGGGGTT-TTC
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH----hh---------------c-C-CCceeCCHHHHh-cCC
Confidence 346899999999999999998876 68999999964211 01 0 1 222333355666 689
Q ss_pred eEEeccccccccccccccc-c--cceEEEecCCCCCCHHH
Q psy8194 302 DILIPAAIEDQITINNANN-V--TAKIILEGANGPTTTEA 338 (428)
Q Consensus 302 DIliPaA~~~~It~~na~~-l--~akiIvegAN~p~t~ea 338 (428)
|+++-|+.... +.+++.. + ...+|+|-.-....+++
T Consensus 60 DvViiatp~~~-h~~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 60 DVLFLCMGSAT-DIPEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp SEEEECSCTTT-HHHHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred CEEEEcCCcHH-HHHHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 99999986553 2333322 2 34677765433333444
No 217
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.03 E-value=0.024 Score=56.93 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=70.5
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
.++-.+++|+|.|.|.+|+.+++.|.+. .+| .|+| -+.+++.+..++.+.+. . +....++.++++
T Consensus 11 ~~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V-~V~~----------R~~~~a~~la~~~~~~~-~-d~~~~~~l~~ll- 75 (365)
T 2z2v_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKDE-FDV-YIGD----------VNNENLEKVKEFATPLK-V-DASNFDKLVEVM- 75 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTTT-SEE-EEEE----------SCHHHHHHHTTTSEEEE-C-CTTCHHHHHHHH-
T ss_pred cccCCCCeEEEEcCCHHHHHHHHHHHcC-CeE-EEEE----------CCHHHHHHHHhhCCeEE-E-ecCCHHHHHHHH-
Confidence 3455789999999999999999999888 665 6888 56777776654321000 0 000000011233
Q ss_pred cCceEEeccccccccccccccc-c-cceEEEecCCCCC-CHHHHHHHHHCCCceecccc
Q psy8194 299 IPCDILIPAAIEDQITINNANN-V-TAKIILEGANGPT-TTEADDILRDKGIILAPDVI 354 (428)
Q Consensus 299 ~~~DIliPaA~~~~It~~na~~-l-~akiIvegAN~p~-t~ea~~iL~~rGI~viPD~l 354 (428)
.++|++|-|+... .+..-+.. + .-+.++.-++.|- +.+-.+..+++|+.++|..=
T Consensus 76 ~~~DvVIn~~P~~-~~~~v~~a~l~~G~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~g~G 133 (365)
T 2z2v_A 76 KEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAG 133 (365)
T ss_dssp TTCSCEEECCCHH-HHHHHHHHHHHTTCCEEECCCCSSCGGGGHHHHHHTTCEEECSCB
T ss_pred hCCCEEEECCChh-hhHHHHHHHHHhCCeEEEccCCcHHHHHHHHHHHHcCCEEEECCC
Confidence 3799999996533 22221111 1 2244566666543 34557788899999987663
No 218
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=95.03 E-value=0.02 Score=56.81 Aligned_cols=110 Identities=15% Similarity=0.252 Sum_probs=71.5
Q ss_pred CCCceEEEEeccHHHHH-HHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-
Q psy8194 222 IINSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS- 298 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~- 298 (428)
++..||+|+|+|++|+. .++.|.+. ++++++|+| .|.+...+..++. ++...++|.+++++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~------~~~~~~~~~~~ll~~ 66 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACD----------SDLERARRVHRFI------SDIPVLDNVPAMLNQ 66 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEEC----------SSHHHHGGGGGTS------CSCCEESSHHHHHHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEc----------CCHHHHHHHHHhc------CCCcccCCHHHHhcC
Confidence 35579999999999984 78888775 799999999 5777766655443 23344444567775
Q ss_pred cCceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHHCCCceec
Q psy8194 299 IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILAP 351 (428)
Q Consensus 299 ~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~---iL~~rGI~viP 351 (428)
.++|+++-|+.. ..+.+.+... ...++||= |+ + .++++ ..+++|+.+.-
T Consensus 67 ~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v 124 (359)
T 3m2t_A 67 VPLDAVVMAGPP-QLHFEMGLLAMSKGVNVFVEK---PPCATLEELETLIDAARRSDVVSGV 124 (359)
T ss_dssp SCCSEEEECSCH-HHHHHHHHHHHHTTCEEEECS---CSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEEEcCCc-HHHHHHHHHHHHCCCeEEEEC---CCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 478999987753 3333333332 34578874 53 2 34443 45567876543
No 219
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.98 E-value=1.4 Score=45.07 Aligned_cols=177 Identities=15% Similarity=0.186 Sum_probs=97.3
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC------------ceec
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE------------GEKI 290 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~------------~~~i 290 (428)
.|.++.|+|.|.||..+|..|.+.|.+|+ +.| +|.+++.++.+..-.+ .-|+ .-..
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~-~~D----------~~~~kv~~L~~g~~pi-~epgl~~ll~~~~~~g~l~~ 77 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVL-GVD----------INQQTIDKLQNGQISI-EEPGLQEVYEEVLSSGKLKV 77 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHTTCCSS-CCTTHHHHHHHHHHTTCEEE
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHCCCCCc-CCCCHHHHHHhhcccCceEE
Confidence 56789999999999999999999999986 668 7788877775432111 1111 1111
Q ss_pred cCCCcccccCceEEecccccccccc---------------cccccc-cceEEEecCCCCC--CHHHH-HHHHHCCC----
Q psy8194 291 NDSKEFWSIPCDILIPAAIEDQITI---------------NNANNV-TAKIILEGANGPT--TTEAD-DILRDKGI---- 347 (428)
Q Consensus 291 ~~~~~il~~~~DIliPaA~~~~It~---------------~na~~l-~akiIvegAN~p~--t~ea~-~iL~~rGI---- 347 (428)
+ .+ + .+||++|-|-....-.. .-++.+ +-.+|+.-.-.|. |.+.. .+++++|.
T Consensus 78 t-td--~-~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~ 153 (431)
T 3ojo_A 78 S-TT--P-EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGE 153 (431)
T ss_dssp E-SS--C-CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTT
T ss_pred e-Cc--h-hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCC
Confidence 2 11 2 37999988765433111 112222 2235554444442 34433 35565763
Q ss_pred ----ceecccccc-------------ccchhhhHHHHHhhcccCC------CC---HHH----HHHHHHHHHHHHHHHHH
Q psy8194 348 ----ILAPDVITN-------------AGGVIVSYFEWVQNLSNLL------WT---EQE----INLRLNNIICNAFDAIW 397 (428)
Q Consensus 348 ----~viPD~laN-------------aGGVi~s~~E~~qn~~~~~------w~---~e~----v~~~l~~~m~~~~~~v~ 397 (428)
..-|.++.- .+|..-..+|.++.+.... .+ .-+ ++.-+...-...++++.
T Consensus 154 d~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~ 233 (431)
T 3ojo_A 154 DIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELT 233 (431)
T ss_dssp TEEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCcCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556654321 1222223455555443211 00 111 22222333345678899
Q ss_pred HHHHhcCCCHHHHHHHHH
Q psy8194 398 ELANTKKVSLRTAAFIIG 415 (428)
Q Consensus 398 ~~a~~~~~~~r~aA~~~a 415 (428)
..+++.|+++.+....++
T Consensus 234 ~l~e~~GiD~~~v~~~~~ 251 (431)
T 3ojo_A 234 KICNNLNINVLDVIEMAN 251 (431)
T ss_dssp HHHHHTTCCHHHHHHHHT
T ss_pred HHHHHcCCCHHHHHHHHc
Confidence 999999999988876654
No 220
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.97 E-value=0.043 Score=51.56 Aligned_cols=81 Identities=11% Similarity=0.263 Sum_probs=51.4
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
++++|++|+|+|.|.||...++.|.+.|++|+-| +. + ++ +++.++.++ +.+.-.. ..+. ++. + .
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVv-ap-------~-~~-~~l~~l~~~-~~i~~i~--~~~~-~~d-L-~ 90 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVV-AP-------T-VS-AEINEWEAK-GQLRVKR--KKVG-EED-L-L 90 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEE-CS-------S-CC-HHHHHHHHT-TSCEEEC--SCCC-GGG-S-S
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEE-CC-------C-CC-HHHHHHHHc-CCcEEEE--CCCC-HhH-h-C
Confidence 4789999999999999999999999999998644 32 1 33 345555543 2221000 0111 112 2 3
Q ss_pred CceEEeccccccccccc
Q psy8194 300 PCDILIPAAIEDQITIN 316 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~ 316 (428)
++|++|-|+-...+|..
T Consensus 91 ~adLVIaAT~d~~~N~~ 107 (223)
T 3dfz_A 91 NVFFIVVATNDQAVNKF 107 (223)
T ss_dssp SCSEEEECCCCTHHHHH
T ss_pred CCCEEEECCCCHHHHHH
Confidence 68888877755555544
No 221
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.97 E-value=0.17 Score=50.38 Aligned_cols=97 Identities=19% Similarity=0.323 Sum_probs=59.3
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHH---HHhcCCCc-CC----CC------cee
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKY---VTFTRSIK-DF----NE------GEK 289 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~---~~~~g~l~-~~----~~------~~~ 289 (428)
.||+|.|||.+|+.+++.|.+. +.+||+|.|.. .|++.+... ...+|.+. +. .+ ++.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~--------~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~ 75 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPF--------ITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKP 75 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS--------SCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCC--------CCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeE
Confidence 5899999999999999999876 78999999831 255543333 23334322 10 01 111
Q ss_pred ---cc--CCCcc-c-ccCceEEecccccccccccccccc---cc-eEEEecC
Q psy8194 290 ---IN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TA-KIILEGA 330 (428)
Q Consensus 290 ---i~--~~~~i-l-~~~~DIliPaA~~~~It~~na~~l---~a-kiIvegA 330 (428)
.. +++++ | ..++|+++.|+. ...+.+.+... .+ |+|++..
T Consensus 76 i~v~~~~dp~~l~w~~~~vDvV~eaTg-~~~~~e~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 76 VTVFGIRNPDEIPWAEAGAEYVVESTG-VFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp EEEECCSCGGGCCHHHHTCSEEEECSS-SCCSHHHHTHHHHTTCSEEEESSC
T ss_pred EEEEecCChHHccccccCCCEEEECCC-chhhHHHHHHHHHcCCCEEEEecC
Confidence 11 24444 3 357899999884 34455555554 45 3777765
No 222
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.96 E-value=0.014 Score=55.72 Aligned_cols=105 Identities=14% Similarity=0.155 Sum_probs=64.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+++.|.+.|.+|+ +.| +. +- .++ ..+. | ....++.++.+ .+||++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-~~-----~~--~~~---~~~~-g-------~~~~~~~~~~~-~~~D~v 62 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLH-VTT-IG-----PV--ADE---LLSL-G-------AVNVETARQVT-EFADII 62 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEE-ECC-SS-----CC--CHH---HHTT-T-------CBCCSSHHHHH-HTCSEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEE-EEc-CH-----HH--HHH---HHHc-C-------CcccCCHHHHH-hcCCEE
Confidence 589999999999999999999999875 555 31 11 122 2221 1 11122133444 379999
Q ss_pred ecccccccccc-------cccccc-cceEEEecCCCCC--CHHHHHHHHHCCCcee
Q psy8194 305 IPAAIEDQITI-------NNANNV-TAKIILEGANGPT--TTEADDILRDKGIILA 350 (428)
Q Consensus 305 iPaA~~~~It~-------~na~~l-~akiIvegAN~p~--t~ea~~iL~~rGI~vi 350 (428)
+-|........ +-.+.+ .-++|+.-.|+.. +.+..+.+.++|+.++
T Consensus 63 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 63 FIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp EECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred EEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 99885443222 222233 3468888888752 2344566777888776
No 223
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=94.95 E-value=0.44 Score=49.79 Aligned_cols=132 Identities=12% Similarity=0.139 Sum_probs=70.4
Q ss_pred hhHHHHHHHHHHHHHHhC---------CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHH
Q psy8194 202 ATGRGVFIIGSKIASKIN---------LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQ 272 (428)
Q Consensus 202 aTg~Gv~~~~~~~~~~~g---------~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~ 272 (428)
-.+.|...+++.+++..+ .++++++++|.|.|.+|+.+++.|.+.|++|+ |+++ +.+++.
T Consensus 333 TD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~-i~~R----------~~~~a~ 401 (523)
T 2o7s_A 333 TDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVV-IANR----------TYERAL 401 (523)
T ss_dssp CHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC-CE-EEES----------SHHHHH
T ss_pred CCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEEC----------CHHHHH
Confidence 345687888776643222 35789999999999999999999999999864 6663 456666
Q ss_pred HHHHhcCCCcCCCCceeccCCCcccccCceEEeccccccc---cccccccc--c-cceEEEecCCCC-CCHHHHHHHHHC
Q psy8194 273 KYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQ---ITINNANN--V-TAKIILEGANGP-TTTEADDILRDK 345 (428)
Q Consensus 273 ~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~---It~~na~~--l-~akiIvegAN~p-~t~ea~~iL~~r 345 (428)
+..++.+. ....+++.+++....+|++|.|+.-+. ++...... + ....+.+-.-.| .||-..+. +++
T Consensus 402 ~la~~~~~-----~~~~~~dl~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a-~~~ 475 (523)
T 2o7s_A 402 ELAEAIGG-----KALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREA-EES 475 (523)
T ss_dssp HHHHHTTC------CEETTTTTTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHH-HTT
T ss_pred HHHHHcCC-----ceeeHHHhhhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHH-HHC
Confidence 65554321 011122111211235899999986321 11111111 1 245677764445 46543332 456
Q ss_pred CCcee
Q psy8194 346 GIILA 350 (428)
Q Consensus 346 GI~vi 350 (428)
|..++
T Consensus 476 G~~~i 480 (523)
T 2o7s_A 476 GAITV 480 (523)
T ss_dssp TCEEE
T ss_pred CCEEE
Confidence 76543
No 224
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.85 E-value=0.044 Score=50.35 Aligned_cols=90 Identities=16% Similarity=0.228 Sum_probs=57.2
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCce
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 302 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~D 302 (428)
..++|.|+|+|++|+.+++.|.+.|.+|+ +.|. +.+.+.+..+. +.+..+ .++.+ .+||
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~-~~~r----------~~~~~~~~~~~--------g~~~~~-~~~~~-~~~D 85 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVV-VGSR----------NPKRTARLFPS--------AAQVTF-QEEAV-SSPE 85 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEE-EEES----------SHHHHHHHSBT--------TSEEEE-HHHHT-TSCS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeC----------CHHHHHHHHHc--------CCceec-HHHHH-hCCC
Confidence 44789999999999999999999999875 5663 44555444322 122222 33444 3799
Q ss_pred EEecccccccccccccc---cccceEEEecCCCCC
Q psy8194 303 ILIPAAIEDQITINNAN---NVTAKIILEGANGPT 334 (428)
Q Consensus 303 IliPaA~~~~It~~na~---~l~akiIvegAN~p~ 334 (428)
+++-|.....+ .+-.. .++-++|+.-+|+-.
T Consensus 86 vVi~av~~~~~-~~v~~l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 86 VIFVAVFREHY-SSLCSLSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp EEEECSCGGGS-GGGGGGHHHHTTCEEEECCCCCH
T ss_pred EEEECCChHHH-HHHHHHHHhcCCCEEEEeCCCcc
Confidence 99998875432 22211 124568888888763
No 225
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.83 E-value=0.085 Score=51.41 Aligned_cols=74 Identities=22% Similarity=0.250 Sum_probs=50.6
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCC-CCceeccCCCcccccCc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-NEGEKINDSKEFWSIPC 301 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~-~~~~~i~~~~~il~~~~ 301 (428)
.-++|+|+|.|.+|+..|..|. .|..|+ +.| .+.+++.+..+.. .... .+.+..++.++ -.+|
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~-v~d----------~~~~~~~~~~~~l--~~~~~~~i~~~~~~~~--~~~a 74 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVV-LQD----------VSEKALEAAREQI--PEELLSKIEFTTTLEK--VKDC 74 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEE-EEC----------SCHHHHHHHHHHS--CGGGGGGEEEESSCTT--GGGC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEE-EEE----------CCHHHHHHHHHHH--HHHHhCCeEEeCCHHH--HcCC
Confidence 4579999999999999999999 999985 777 6777777766550 0000 01222232443 2589
Q ss_pred eEEeccccccc
Q psy8194 302 DILIPAAIEDQ 312 (428)
Q Consensus 302 DIliPaA~~~~ 312 (428)
|++|.|..++.
T Consensus 75 DlVieavpe~~ 85 (293)
T 1zej_A 75 DIVMEAVFEDL 85 (293)
T ss_dssp SEEEECCCSCH
T ss_pred CEEEEcCcCCH
Confidence 99999887665
No 226
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.77 E-value=0.052 Score=51.82 Aligned_cols=87 Identities=13% Similarity=0.191 Sum_probs=56.9
Q ss_pred ceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
++|.|+|+ |++|+.+++.|.+.|.+|+ +.| .+.+.+.+..+ .| + ...+ ..+.+ .+||+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~----------r~~~~~~~~~~-~g-~------~~~~-~~~~~-~~aDv 70 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIE----------IAPEGRDRLQG-MG-I------PLTD-GDGWI-DEADV 70 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EEC----------CSHHHHHHHHH-TT-C------CCCC-SSGGG-GTCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEE----------CCHHHHHHHHh-cC-C------CcCC-HHHHh-cCCCE
Confidence 58999999 9999999999999999885 677 45555555544 22 1 1112 44444 37899
Q ss_pred Eecccccccccccccccc----c-ceEEEecCCCC
Q psy8194 304 LIPAAIEDQITINNANNV----T-AKIILEGANGP 333 (428)
Q Consensus 304 liPaA~~~~It~~na~~l----~-akiIvegAN~p 333 (428)
+|-|.....+ .+.+..+ + -++|+..+++.
T Consensus 71 Vi~av~~~~~-~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 71 VVLALPDNII-EKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp EEECSCHHHH-HHHHHHHGGGSCTTCEEEESCSHH
T ss_pred EEEcCCchHH-HHHHHHHHHhCCCCCEEEECCCCc
Confidence 9988875543 3322222 2 35777766664
No 227
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=94.71 E-value=0.017 Score=56.52 Aligned_cols=111 Identities=12% Similarity=0.140 Sum_probs=63.9
Q ss_pred CCceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
+-.||+|+|+|++|...++.|.+ .++++++|+|.+ .++..+..++.+ -...+++.++++. .+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~----------~~~~~~~a~~~~------~~~~~~~~~~ll~~~~ 67 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRT----------LESAQAFANKYH------LPKAYDKLEDMLADES 67 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSC----------SSTTCC---CCC------CSCEESCHHHHHTCTT
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCC----------HHHHHHHHHHcC------CCcccCCHHHHhcCCC
Confidence 45799999999999999888876 468999999953 222222222222 1123333566664 47
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCcee
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~vi 350 (428)
+|+++-|+.. ..+.+.+... ...++||=.=.....++++ ..+++|+.+.
T Consensus 68 ~D~V~i~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 122 (329)
T 3evn_A 68 IDVIYVATIN-QDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLM 122 (329)
T ss_dssp CCEEEECSCG-GGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEECCCc-HHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 8998887754 3334433332 3457787521111234443 3556777654
No 228
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=94.69 E-value=0.0084 Score=59.69 Aligned_cols=95 Identities=18% Similarity=0.288 Sum_probs=56.1
Q ss_pred ceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcC-CCc-CCCCc--------eecc-C
Q psy8194 225 SKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR-SIK-DFNEG--------EKIN-D 292 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g-~l~-~~~~~--------~~i~-~ 292 (428)
.||+|.|+|.+|+.+++.|.+ .+..+++|.|.+ +....+...+.+ ++- .+++. -.+. +
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~----------~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTR----------PDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGT 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESS----------CSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCC----------hhHHHHhcCCcchhhccccccceeeecCCceEEcCC
Confidence 489999999999999999987 578999999842 222222222211 110 01100 0011 1
Q ss_pred CCcccccCceEEecccccccccccccccc---cceEEEecCC
Q psy8194 293 SKEFWSIPCDILIPAAIEDQITINNANNV---TAKIILEGAN 331 (428)
Q Consensus 293 ~~~il~~~~DIliPaA~~~~It~~na~~l---~akiIvegAN 331 (428)
.++++ .++|+++.|+... .+.+.++.. .+++|.+++-
T Consensus 72 ~~~~~-~~vDvV~~atp~~-~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 72 VDDML-DEADIVIDCTPEG-IGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp HHHHH-HTCSEEEECCSTT-HHHHHHHHHHHHTCCEEECTTS
T ss_pred HHHHh-cCCCEEEECCCch-hhHHHHHHHHHcCCEEEEecCC
Confidence 22333 3799999987543 445555544 5778887764
No 229
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=94.53 E-value=0.15 Score=50.88 Aligned_cols=32 Identities=34% Similarity=0.490 Sum_probs=28.9
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 256 (428)
.||+|-|||.+|+.+++.|.+. ...||+|.|.
T Consensus 3 ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~ 35 (342)
T 2ep7_A 3 IKVGINGFGRIGRSFFRASWGREEIEIVAINDL 35 (342)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 5899999999999999999876 6899999993
No 230
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.46 E-value=0.069 Score=51.41 Aligned_cols=30 Identities=23% Similarity=0.397 Sum_probs=27.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
++|+|+|.|++|..+|..|.+.|..|+ +.|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~-~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVV-LVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEE
Confidence 589999999999999999999999885 777
No 231
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=94.44 E-value=0.041 Score=54.06 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=31.0
Q ss_pred CCCCceEEEEeccHHHH-HHHHHHHHC-CCEEEEEEcCC
Q psy8194 221 NIINSKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDK 257 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~ 257 (428)
+++..||+|+|+|++|+ ..++.|.+. +++|++|+|.+
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~ 60 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH 60 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence 35668999999999998 677777774 89999999975
No 232
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.41 E-value=0.074 Score=50.63 Aligned_cols=108 Identities=17% Similarity=0.129 Sum_probs=64.0
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC-----ceeccCCCcccc-
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE-----GEKINDSKEFWS- 298 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~-----~~~i~~~~~il~- 298 (428)
++|.|+|.|++|+.+|..|.+.|..|+ +.| .+.+.+.+..+..-.+...++ ....+ ++++..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~----------r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~ 71 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVT-LID----------QWPAHIEAIRKNGLIADFNGEEVVANLPIFS-PEEIDHQ 71 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHHCEEEEETTEEEEECCCEEC-GGGCCTT
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEE-EEE----------CCHHHHHHHHhCCEEEEeCCCeeEecceeec-chhhccc
Confidence 589999999999999999999999875 566 345555555443211111110 01112 233333
Q ss_pred -cCceEEeccccccccccccc----cccc-ceEEEecCCCCCC-HHHHHHHHHC
Q psy8194 299 -IPCDILIPAAIEDQITINNA----NNVT-AKIILEGANGPTT-TEADDILRDK 345 (428)
Q Consensus 299 -~~~DIliPaA~~~~It~~na----~~l~-akiIvegAN~p~t-~ea~~iL~~r 345 (428)
.+||+++-|.....+ .+-+ +.++ -++|+.-.|+.-+ ....+.|.+.
T Consensus 72 ~~~~d~vi~~v~~~~~-~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 72 NEQVDLIIALTKAQQL-DAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKE 124 (316)
T ss_dssp SCCCSEEEECSCHHHH-HHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCGG
T ss_pred CCCCCEEEEEeccccH-HHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCCc
Confidence 289999998875543 2222 2232 3588888887654 3333445443
No 233
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.39 E-value=0.046 Score=56.73 Aligned_cols=121 Identities=12% Similarity=0.136 Sum_probs=66.5
Q ss_pred hCCCCCCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceec--cCCC
Q psy8194 218 INLNIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI--NDSK 294 (428)
Q Consensus 218 ~g~~l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i--~~~~ 294 (428)
.+.++++++|+|.|.|.+|+.+++.|.+. |.+| .|+|+ +.+++.+..++.+ +. ...+ .+.+
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V-~v~~R----------~~~ka~~la~~~~-~~----~~~~D~~d~~ 80 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINV-TVACR----------TLANAQALAKPSG-SK----AISLDVTDDS 80 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEE-EEEES----------SHHHHHHHHGGGT-CE----EEECCTTCHH
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeE-EEEEC----------CHHHHHHHHHhcC-Cc----EEEEecCCHH
Confidence 45678899999999999999999999998 6775 57773 5566666554321 10 0011 1111
Q ss_pred c---ccccCceEEecccccccccccccc-cccc-eEEEec-CCCCCCHHHHHHHHHCCCceecccccc
Q psy8194 295 E---FWSIPCDILIPAAIEDQITINNAN-NVTA-KIILEG-ANGPTTTEADDILRDKGIILAPDVITN 356 (428)
Q Consensus 295 ~---il~~~~DIliPaA~~~~It~~na~-~l~a-kiIveg-AN~p~t~ea~~iL~~rGI~viPD~laN 356 (428)
+ .+ .++|++|-|+.... +..-+. .+++ +.++.- -..|.+.+..+..+++|+.+++..-.+
T Consensus 81 ~l~~~l-~~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~ 146 (467)
T 2axq_A 81 ALDKVL-ADNDVVISLIPYTF-HPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLD 146 (467)
T ss_dssp HHHHHH-HTSSEEEECSCGGG-HHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBT
T ss_pred HHHHHH-cCCCEEEECCchhh-hHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcC
Confidence 2 22 37999999986432 211111 1121 233332 223333344456678899887766543
No 234
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.39 E-value=0.84 Score=46.95 Aligned_cols=181 Identities=16% Similarity=0.142 Sum_probs=96.8
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCC------------C-ceec
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN------------E-GEKI 290 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~------------~-~~~i 290 (428)
..|++|+|.|.||..+|..|.+.|.+|+ +.| +|.+++.++.+.. .-...| + .+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~-~~D----------~~~~kv~~l~~g~-~~~~epgl~~~~~~~~~~g~l~~t 75 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVV-CVD----------KDARKIELLHQNV-MPIYEPGLDALVASNVKAGRLSFT 75 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCSTTHHHHTTTC-CSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHhcCC-CCccCCCHHHHHHhhcccCCEEEE
Confidence 4689999999999999999999999986 566 3333443333211 000001 1 1121
Q ss_pred cCCCcccccCceEEeccccccc-----------cc---ccccccc-cceEEEecCCCCC--CHHHHHHHHHCC------C
Q psy8194 291 NDSKEFWSIPCDILIPAAIEDQ-----------IT---INNANNV-TAKIILEGANGPT--TTEADDILRDKG------I 347 (428)
Q Consensus 291 ~~~~~il~~~~DIliPaA~~~~-----------It---~~na~~l-~akiIvegAN~p~--t~ea~~iL~~rG------I 347 (428)
+|..+.+ .+||++|-|-.... +. ..-++.+ +-++|+.-.-.|. |.+..+++.+++ +
T Consensus 76 td~~ea~-~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v 154 (446)
T 4a7p_A 76 TDLAEGV-KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKV 154 (446)
T ss_dssp SCHHHHH-TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEE
T ss_pred CCHHHHH-hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceE
Confidence 2122222 47999998843221 10 1112222 2245554444442 455566777654 4
Q ss_pred ceeccccccc-------------cchh-hhHHHHHhhcccCCC----------CHH--H----HHHHHHHHHHHHHHHHH
Q psy8194 348 ILAPDVITNA-------------GGVI-VSYFEWVQNLSNLLW----------TEQ--E----INLRLNNIICNAFDAIW 397 (428)
Q Consensus 348 ~viPD~laNa-------------GGVi-~s~~E~~qn~~~~~w----------~~e--~----v~~~l~~~m~~~~~~v~ 397 (428)
..-|.++... .|.. -..+|.++.+..... +.. + ++.-+.......++++.
T Consensus 155 ~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~ 234 (446)
T 4a7p_A 155 VSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIA 234 (446)
T ss_dssp EECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556654321 1111 234555554432111 111 1 12223344456778999
Q ss_pred HHHHhcCCCHHHHHHHHHHH
Q psy8194 398 ELANTKKVSLRTAAFIIGCT 417 (428)
Q Consensus 398 ~~a~~~~~~~r~aA~~~a~~ 417 (428)
..+++.|+++.+....++.+
T Consensus 235 ~l~~~~GiD~~~v~~~~~~~ 254 (446)
T 4a7p_A 235 DLCEQVGADVQEVSRGIGMD 254 (446)
T ss_dssp HHHHHTTCCHHHHHHHHHTS
T ss_pred HHHHHcCCCHHHHHHHHhcC
Confidence 99999999999888776543
No 235
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=94.39 E-value=0.15 Score=43.95 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=64.9
Q ss_pred CCC-CCCceEEEEec----cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCC
Q psy8194 219 NLN-IINSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDS 293 (428)
Q Consensus 219 g~~-l~g~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~ 293 (428)
|.. ++-++|+|+|. |++|+.+++.|.+.|.+|.. .| |++ + .+. +...+++.
T Consensus 8 ~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~-vn-------p~~---~----------~i~---G~~~~~s~ 63 (138)
T 1y81_A 8 GSNSKEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLP-VN-------PNY---D----------EIE---GLKCYRSV 63 (138)
T ss_dssp ------CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEE-EC-------TTC---S----------EET---TEECBSSG
T ss_pred cccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEE-eC-------CCC---C----------eEC---CeeecCCH
Confidence 444 36789999999 99999999999999998543 22 322 0 011 22233223
Q ss_pred CcccccCceEEecccccccccccccc---cccceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhhh
Q psy8194 294 KEFWSIPCDILIPAAIEDQITINNAN---NVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVS 363 (428)
Q Consensus 294 ~~il~~~~DIliPaA~~~~It~~na~---~l~akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s 363 (428)
+++.+ ++|+.+-|... ....+.+. ..+++.|+.-. +-.+.+..++.+++|+.++ =-|+-|++..
T Consensus 64 ~el~~-~vDlvii~vp~-~~v~~v~~~~~~~g~~~i~~~~-~~~~~~l~~~a~~~Gi~~i---gpnc~g~~~~ 130 (138)
T 1y81_A 64 RELPK-DVDVIVFVVPP-KVGLQVAKEAVEAGFKKLWFQP-GAESEEIRRFLEKAGVEYS---FGRCIMVETS 130 (138)
T ss_dssp GGSCT-TCCEEEECSCH-HHHHHHHHHHHHTTCCEEEECT-TSCCHHHHHHHHHHTCEEE---CSCCHHHHC-
T ss_pred HHhCC-CCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcC-ccHHHHHHHHHHHCCCEEE---cCCcceEEcc
Confidence 34433 57777766542 22222221 22334344322 1247888889999999885 2366777654
No 236
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.36 E-value=0.31 Score=48.30 Aligned_cols=32 Identities=38% Similarity=0.553 Sum_probs=28.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 256 (428)
.||+|.|||.+|+.++|+|.+. ...||+|.|.
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 4899999999999999999875 5799999984
No 237
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.36 E-value=0.045 Score=51.20 Aligned_cols=106 Identities=19% Similarity=0.263 Sum_probs=61.6
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCC----CEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAG----AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~G----akvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++|.|+|.|++|+.+++.|.+.| ..| .+.|.+-.- . +....+++.+.+
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v-~~~~~~~~~-----------------~-------g~~~~~~~~~~~- 56 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANANIIKKENL-FYYGPSKKN-----------------T-------TLNYMSSNEELA- 56 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHHTSSCGGGE-EEECSSCCS-----------------S-------SSEECSCHHHHH-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCCCCCeE-EEEeCCccc-----------------C-------ceEEeCCHHHHH-
Confidence 3468999999999999999999988 466 467753111 0 122222122333
Q ss_pred cCceEEecccccccccc---cccccccceEEEecCCCCCCHHHHHHHHH--CCCceecccc
Q psy8194 299 IPCDILIPAAIEDQITI---NNANNVTAKIILEGANGPTTTEADDILRD--KGIILAPDVI 354 (428)
Q Consensus 299 ~~~DIliPaA~~~~It~---~na~~l~akiIvegAN~p~t~ea~~iL~~--rGI~viPD~l 354 (428)
.+||+++-|.....+.+ +-.+.++-++|+--.|+-......+.+.+ +.+.++|..-
T Consensus 57 ~~~D~vi~~v~~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p 117 (262)
T 2rcy_A 57 RHCDIIVCAVKPDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTP 117 (262)
T ss_dssp HHCSEEEECSCTTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGG
T ss_pred hcCCEEEEEeCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChH
Confidence 37899999887554321 12222334566666665333334445533 2356677653
No 238
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.34 E-value=0.045 Score=54.37 Aligned_cols=123 Identities=17% Similarity=0.161 Sum_probs=72.4
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc--cC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS--IP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~--~~ 300 (428)
+.+||+|.|.|.||+.+++.|.+ ...| .++| ++.+.+.+.++....+ . .. ++|.+++.+ .+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v-~~~~----------~~~~~~~~~~~~~~~~-~---~d-~~d~~~l~~~~~~ 77 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDV-YIGD----------VNNENLEKVKEFATPL-K---VD-ASNFDKLVEVMKE 77 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEE-EEEE----------SCHHHHHHHTTTSEEE-E---CC-TTCHHHHHHHHTT
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCe-EEEE----------cCHHHHHHHhccCCcE-E---Ee-cCCHHHHHHHHhC
Confidence 45689999999999999999976 4565 4777 5667766654321100 0 00 111222222 48
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCC-CCHHHHHHHHHCCCceeccccccccchhhhHH
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGP-TTTEADDILRDKGIILAPDVITNAGGVIVSYF 365 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p-~t~ea~~iL~~rGI~viPD~laNaGGVi~s~~ 365 (428)
+|++|-|+... .+..-+... ++ -++.-+-.+ ...+.++..+++|+.++|+.=. +-|++..+.
T Consensus 78 ~DvVi~~~p~~-~~~~v~~~~~~~g~-~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~-~PG~~~~~a 143 (365)
T 3abi_A 78 FELVIGALPGF-LGFKSIKAAIKSKV-DMVDVSFMPENPLELRDEAEKAQVTIVFDAGF-APGLSNILM 143 (365)
T ss_dssp CSEEEECCCGG-GHHHHHHHHHHHTC-EEEECCCCSSCGGGGHHHHHHTTCEEECCCBT-TTBHHHHHH
T ss_pred CCEEEEecCCc-ccchHHHHHHhcCc-ceEeeeccchhhhhhhhhhccCCceeeecCCC-CCchHHHHH
Confidence 99999988654 333322221 33 344544433 3445677788999999997633 445554443
No 239
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.23 E-value=0.026 Score=55.86 Aligned_cols=34 Identities=24% Similarity=0.408 Sum_probs=29.9
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+++++|+|+|+|++|+.+|+.|.+.|.+|+ +.|.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~-~~~~ 47 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVT-VGLR 47 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEE-EECC
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEE-EEEC
Confidence 567899999999999999999999999875 6664
No 240
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.21 E-value=0.061 Score=46.49 Aligned_cols=36 Identities=33% Similarity=0.447 Sum_probs=29.9
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
-..+.+.+|+|.|+|.+|+.+++.|.+.|.+|+ +.|
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~-vid 49 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVV-VVD 49 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEE-EEE
Confidence 345788999999999999999999999999987 445
No 241
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=94.19 E-value=0.087 Score=51.85 Aligned_cols=107 Identities=17% Similarity=0.222 Sum_probs=66.6
Q ss_pred ceEEEEeccHHHH-HHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc-Cc
Q psy8194 225 SKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI-PC 301 (428)
Q Consensus 225 ~~vaIqGfGnVG~-~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~-~~ 301 (428)
.||+|+|+|.+|+ ..+..|.+. +++|++|+|.+ ..+ ++.++.+ .++...++|.++++.. ++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~---------~~~---~~a~~~~----~~~~~~~~~~~~ll~~~~~ 66 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH---------VNE---KAAAPFK----EKGVNFTADLNELLTDPEI 66 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT---------CCH---HHHHHHH----TTTCEEESCTHHHHSCTTC
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC---------HHH---HHHHhhC----CCCCeEECCHHHHhcCCCC
Confidence 5899999999998 567777654 89999999964 112 2222211 1234455546778764 69
Q ss_pred eEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHHCCCceec
Q psy8194 302 DILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILAP 351 (428)
Q Consensus 302 DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~---iL~~rGI~viP 351 (428)
|+++-|+.. ..+.+.+... ...+++| -|+ | .++++ ..+++|+.+..
T Consensus 67 D~V~i~tp~-~~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v 121 (349)
T 3i23_A 67 ELITICTPA-HTHYDLAKQAILAGKSVIVE---KPFCDTLEHAEELFALGQEKGVVVMP 121 (349)
T ss_dssp CEEEECSCG-GGHHHHHHHHHHTTCEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEeCCc-HHHHHHHHHHHHcCCEEEEE---CCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 999998854 4444443332 4467776 453 2 34443 45567876653
No 242
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.16 E-value=0.02 Score=55.37 Aligned_cols=117 Identities=15% Similarity=0.216 Sum_probs=70.9
Q ss_pred CCceEEEEe-ccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCC-CceeccCCCccccc
Q psy8194 223 INSKISIQG-FGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN-EGEKINDSKEFWSI 299 (428)
Q Consensus 223 ~g~~vaIqG-fGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~-~~~~i~~~~~il~~ 299 (428)
+-.||+|.| +|.+|+.+++.+.+ .+.++|++.|.++.- ..|.|+.++. +.+ +....+|.++++.
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~--~~G~d~gel~----------g~~~gv~v~~dl~~ll~- 72 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP--QLGQDAGAFL----------GKQTGVALTDDIERVCA- 72 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT--TTTSBTTTTT----------TCCCSCBCBCCHHHHHH-
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc--cccccHHHHh----------CCCCCceecCCHHHHhc-
Confidence 347999999 89999999998876 578999999976431 1355544332 111 2222232345555
Q ss_pred CceEEecccccccccccccccc---cceEEEecCCCCCCHHHHHHHHH----CCCceeccccc
Q psy8194 300 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDILRD----KGIILAPDVIT 355 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~iL~~----rGI~viPD~la 355 (428)
++||+|.++..... .+|+... +.++|++- -.++++..+.|++ .++++.|.+..
T Consensus 73 ~~DVVIDfT~p~a~-~~~~~~al~~G~~vVigT--TG~s~~~~~~L~~aa~~~~vv~a~N~s~ 132 (272)
T 4f3y_A 73 EADYLIDFTLPEGT-LVHLDAALRHDVKLVIGT--TGFSEPQKAQLRAAGEKIALVFSANMSV 132 (272)
T ss_dssp HCSEEEECSCHHHH-HHHHHHHHHHTCEEEECC--CCCCHHHHHHHHHHTTTSEEEECSCCCH
T ss_pred CCCEEEEcCCHHHH-HHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHhccCCEEEECCCCH
Confidence 79999999965433 3344333 55677743 2356654444433 35566665543
No 243
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.15 E-value=0.094 Score=50.16 Aligned_cols=40 Identities=23% Similarity=0.231 Sum_probs=33.0
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 275 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~ 275 (428)
++|+|+|.|++|+.+|+.|.+.|.+|+ +.| .+.+.+.+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~-l~d----------~~~~~~~~~~ 44 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVT-AYD----------INTDALDAAK 44 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEe----------CCHHHHHHHH
Confidence 689999999999999999999999985 677 5566555443
No 244
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.12 E-value=0.069 Score=53.33 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=61.6
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCc------eeccCCCc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEG------EKINDSKE 295 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~------~~i~~~~~ 295 (428)
...++|+|+|.|++|..+|..|.+.|..|. +.| .|.+.+.+..+.+.....+|+. ...+|.++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~-l~~----------r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~e 95 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVR-LWS----------YESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKA 95 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEE-EEC----------SCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHH
Confidence 345789999999999999999999999875 666 4666666665543222212222 11121222
Q ss_pred ccccCceEEecccccccccc---ccccccc-ceEEEecCCCCC
Q psy8194 296 FWSIPCDILIPAAIEDQITI---NNANNVT-AKIILEGANGPT 334 (428)
Q Consensus 296 il~~~~DIliPaA~~~~It~---~na~~l~-akiIvegAN~p~ 334 (428)
.+ .+||++|-|.....+.+ +-.+.++ -.+|+...|+-.
T Consensus 96 a~-~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 96 SL-EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HH-TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HH-hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 22 47999998876543321 1222232 357888888653
No 245
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=94.11 E-value=0.045 Score=54.23 Aligned_cols=111 Identities=15% Similarity=0.212 Sum_probs=69.9
Q ss_pred CCceEEEEeccHHHHH-HHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc-
Q psy8194 223 INSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI- 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~-~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~- 299 (428)
+-.||+|+|+|++|+. .+..|.+. +++|++|+|.+ .++ ..+ .|++...++|.++++..
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------~~~---~~~------~~~~~~~~~~~~~ll~~~ 64 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS----------KEL---SKE------RYPQASIVRSFKELTEDP 64 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS----------CCG---GGT------TCTTSEEESCSHHHHTCT
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC----------HHH---HHH------hCCCCceECCHHHHhcCC
Confidence 4579999999999986 67777665 89999999964 111 111 23445555556777764
Q ss_pred CceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCceeccc
Q psy8194 300 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAPDV 353 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~viPD~ 353 (428)
++|+++-|+.. ..+.+.+... ...++||=.=.....|+++ ..+++|+.+...+
T Consensus 65 ~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 123 (362)
T 3fhl_A 65 EIDLIVVNTPD-NTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQ 123 (362)
T ss_dssp TCCEEEECSCG-GGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCCEEEEeCCh-HHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 69999998754 3444433332 4568888532222345554 3456787665433
No 246
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.04 E-value=0.022 Score=58.99 Aligned_cols=70 Identities=23% Similarity=0.264 Sum_probs=50.5
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceecc-C--CCccc---
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN-D--SKEFW--- 297 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~-~--~~~il--- 297 (428)
.++|+|.|+|.||+++|+.|.+.|..|+ |-| -|.+.+.++.++.+ ...+. | ..++|
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~-vId----------~d~~~~~~~~~~~~-------~~~i~Gd~~~~~~L~~A 64 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDIT-IVD----------KDGDRLRELQDKYD-------LRVVNGHASHPDVLHEA 64 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEE-EEE----------SCHHHHHHHHHHSS-------CEEEESCTTCHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEE-EEE----------CCHHHHHHHHHhcC-------cEEEEEcCCCHHHHHhc
Confidence 5789999999999999999999999986 778 57888877766542 11111 0 12233
Q ss_pred -ccCceEEecccccc
Q psy8194 298 -SIPCDILIPAAIED 311 (428)
Q Consensus 298 -~~~~DIliPaA~~~ 311 (428)
-.+||+||-++-..
T Consensus 65 gi~~ad~~ia~t~~D 79 (461)
T 4g65_A 65 GAQDADMLVAVTNTD 79 (461)
T ss_dssp TTTTCSEEEECCSCH
T ss_pred CCCcCCEEEEEcCCh
Confidence 24799999877653
No 247
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.01 E-value=0.1 Score=51.38 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=33.4
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHH
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 275 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~ 275 (428)
-++|+|+|.|++|...|..|.+.|..|+ +.| .+.+.+.+..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~-l~d----------~~~~~~~~~~ 46 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVK-LYD----------IEPRQITGAL 46 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SCHHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHH
Confidence 4689999999999999999999999985 677 5666665543
No 248
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=94.01 E-value=0.19 Score=43.50 Aligned_cols=109 Identities=13% Similarity=0.121 Sum_probs=63.6
Q ss_pred CceEEEEec----cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 224 NSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 224 g~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++|+|+|. |++|..+++.|.+.|.+|..| ||++ ..+. +...+.+.+++- .
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--------np~~-------------~~i~---G~~~y~sl~~l~-~ 76 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--------NPKY-------------EEVL---GRKCYPSVLDIP-D 76 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTC-------------SEET---TEECBSSGGGCS-S
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--------CCCC-------------CeEC---CeeccCCHHHcC-C
Confidence 578999999 799999999999999986544 2332 0111 222222133333 2
Q ss_pred CceEEeccccccccccccc---ccccceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhh
Q psy8194 300 PCDILIPAAIEDQITINNA---NNVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIV 362 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na---~~l~akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~ 362 (428)
++|+.+-|.... ...+.+ -...+|.|+--.. -...+..++.++.|+.++ --|+-|+..
T Consensus 77 ~vDlvvi~vp~~-~~~~vv~~~~~~gi~~i~~~~g-~~~~~l~~~a~~~Gi~vv---Gpnc~gv~~ 137 (144)
T 2d59_A 77 KIEVVDLFVKPK-LTMEYVEQAIKKGAKVVWFQYN-TYNREASKKADEAGLIIV---ANRCMMREH 137 (144)
T ss_dssp CCSEEEECSCHH-HHHHHHHHHHHHTCSEEEECTT-CCCHHHHHHHHHTTCEEE---ESCCHHHHH
T ss_pred CCCEEEEEeCHH-HHHHHHHHHHHcCCCEEEECCC-chHHHHHHHHHHcCCEEE---cCCchhhcc
Confidence 567666654332 112222 1224455554332 247888899999999886 235555544
No 249
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.00 E-value=0.053 Score=53.98 Aligned_cols=107 Identities=12% Similarity=0.061 Sum_probs=63.7
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc---c
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS---I 299 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~---~ 299 (428)
.-++|.|+|+|++|..+|+.|.+.|.+|+ +.| .+.+.+....+ .| ....++.++.+. .
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~-~~d----------r~~~~~~~a~~-~G-------~~~~~~~~e~~~~a~~ 67 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVF-GYN----------RSRSGAKSAVD-EG-------FDVSADLEATLQRAAA 67 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SCHHHHHHHHH-TT-------CCEESCHHHHHHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHH-cC-------CeeeCCHHHHHHhccc
Confidence 34689999999999999999999999875 667 45666655443 22 122222344443 2
Q ss_pred CceEEecccccccccccccccc----cceEEEecCCCCCCHHHHHHHHHC--CCceec
Q psy8194 300 PCDILIPAAIEDQITINNANNV----TAKIILEGANGPTTTEADDILRDK--GIILAP 351 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~l----~akiIvegAN~p~t~ea~~iL~~r--GI~viP 351 (428)
+||+++-|.....+ .+.+..+ .-.+|+..+. +..+..+.+.+. ++.++|
T Consensus 68 ~aDlVilavP~~~~-~~vl~~l~~~~~~~iv~Dv~S--vk~~i~~~~~~~~~~~~~v~ 122 (341)
T 3ktd_A 68 EDALIVLAVPMTAI-DSLLDAVHTHAPNNGFTDVVS--VKTAVYDAVKARNMQHRYVG 122 (341)
T ss_dssp TTCEEEECSCHHHH-HHHHHHHHHHCTTCCEEECCS--CSHHHHHHHHHTTCGGGEEC
T ss_pred CCCEEEEeCCHHHH-HHHHHHHHccCCCCEEEEcCC--CChHHHHHHHHhCCCCcEec
Confidence 68999998875433 2333322 2235665533 223322333332 467777
No 250
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=93.99 E-value=0.04 Score=55.41 Aligned_cols=116 Identities=10% Similarity=0.060 Sum_probs=72.7
Q ss_pred CCCceEEEEeccH---HHHHHHHHHHHCC-CEEEE-EEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcc
Q psy8194 222 IINSKISIQGFGN---VGSVAANLFFKAG-AKIVA-IQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 296 (428)
Q Consensus 222 l~g~~vaIqGfGn---VG~~~a~~L~~~G-akvVa-VsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~i 296 (428)
++-.||+|+|+|. +|+.-+..+...+ +++|+ |+| .|.+...+..++.|. +....++|.+++
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d----------~~~~~a~~~a~~~g~----~~~~~~~~~~~l 75 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFD----------IDPIRGSAFGEQLGV----DSERCYADYLSM 75 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECC----------SSHHHHHHHHHHTTC----CGGGBCSSHHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeC----------CCHHHHHHHHHHhCC----CcceeeCCHHHH
Confidence 4668999999999 9988887776654 88998 889 678888877776542 111233335567
Q ss_pred ccc------CceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCceecc
Q psy8194 297 WSI------PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAPD 352 (428)
Q Consensus 297 l~~------~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~viPD 352 (428)
++. ++|+++-|+.. ..+.+.+... ...++||=.=.....++++ ..+++|+.+.-.
T Consensus 76 l~~~~~~~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~ 142 (398)
T 3dty_A 76 FEQEARRADGIQAVSIATPN-GTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGVT 142 (398)
T ss_dssp HHHHTTCTTCCSEEEEESCG-GGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred HhcccccCCCCCEEEECCCc-HHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 653 58999877643 3444433332 4467787422222234543 456678766533
No 251
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=93.95 E-value=0.083 Score=49.17 Aligned_cols=46 Identities=15% Similarity=0.263 Sum_probs=37.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 49 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVI-VSD----------INAEGAKAAAAS 49 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999998 8899999999999999986 566 455666665544
No 252
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.94 E-value=0.17 Score=48.31 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCceEEEEe-ccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 202 ATGRGVFIIGSKIASKINLNIINSKISIQG-FGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 202 aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
-++.|....++..+ +.++++++++|.| .|.+|+.+++.|.+.|++| .+.++
T Consensus 100 Td~~g~~~~l~~~~---~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V-~i~~R 151 (287)
T 1lu9_A 100 TTAAAGVALVVKAA---GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEV-VLCGR 151 (287)
T ss_dssp HHHHHHHHHHHHHT---TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEE-EEEES
T ss_pred chHHHHHHHHHHhh---ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEE-EEEEC
Confidence 45777777765432 6678999999999 8999999999999999995 57774
No 253
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.92 E-value=0.9 Score=47.02 Aligned_cols=42 Identities=21% Similarity=0.345 Sum_probs=34.6
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHH
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 276 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~ 276 (428)
.++|+|+|.|.||..+|..|.+.|.+|+ +.| .|.+++.++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~-~~d----------~~~~~v~~l~~ 49 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVF-CLD----------VDQAKIDILNN 49 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHT
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEE-EEE----------CCHHHHHHHHC
Confidence 4789999999999999999999999986 557 56666666544
No 254
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=93.87 E-value=0.07 Score=51.97 Aligned_cols=108 Identities=17% Similarity=0.127 Sum_probs=65.9
Q ss_pred ceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc------
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW------ 297 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il------ 297 (428)
+||+|+|+ |.+|...++.|.+.+.++++|+|.+- +. .... ..|++.+.+++.++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~----------~~-~~~~------~~~~~~~~~~~~~~ll~~~~~l 66 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPAT----------NV-GLVD------SFFPEAEFFTEPEAFEAYLEDL 66 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSC----------CC-GGGG------GTCTTCEEESCHHHHHHHHHHH
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCH----------HH-HHHH------hhCCCCceeCCHHHHHHHhhhh
Confidence 68999999 78999999999999999999999541 11 0111 1234445454345565
Q ss_pred ---ccCceEEecccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHHCCCcee
Q psy8194 298 ---SIPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILA 350 (428)
Q Consensus 298 ---~~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~i---L~~rGI~vi 350 (428)
..++|+++-|+.. ..+.+.+... ...++||=.=.....|++++ .+++|+.+.
T Consensus 67 ~~~~~~vD~V~I~tP~-~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 127 (312)
T 3o9z_A 67 RDRGEGVDYLSIASPN-HLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVY 127 (312)
T ss_dssp HHTTCCCSEEEECSCG-GGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEE
T ss_pred cccCCCCcEEEECCCc-hhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3578888877743 3444443332 45677774222223455543 446677553
No 255
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=93.73 E-value=0.04 Score=52.57 Aligned_cols=68 Identities=9% Similarity=0.007 Sum_probs=40.1
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|.|++|+.+++.|.+. .+|+.+.| .+.+.+.+..++.+. ..++.++++ .+||++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~----------~~~~~~~~~~~~~g~--------~~~~~~~~~-~~~DvV 62 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILS----------RSIDRARNLAEVYGG--------KAATLEKHP-ELNGVV 62 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEEC----------SSHHHHHHHHHHTCC--------CCCSSCCCC-C---CE
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEe----------CCHHHHHHHHHHcCC--------ccCCHHHHH-hcCCEE
Confidence 4799999999999999999877 66655777 456666666554432 112133433 257888
Q ss_pred eccccccc
Q psy8194 305 IPAAIEDQ 312 (428)
Q Consensus 305 iPaA~~~~ 312 (428)
|-|.....
T Consensus 63 ilav~~~~ 70 (276)
T 2i76_A 63 FVIVPDRY 70 (276)
T ss_dssp EECSCTTT
T ss_pred EEeCChHH
Confidence 87776554
No 256
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=93.73 E-value=0.087 Score=51.07 Aligned_cols=109 Identities=19% Similarity=0.194 Sum_probs=64.8
Q ss_pred CCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
+..||+|||+ |+.|+..++.|.+.|.++|+..|.... | ++ +. +...+++.+++.. .+
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~-----g----------~~---~~---G~~vy~sl~el~~~~~ 64 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG-----G----------TT---HL---GLPVFNTVREAVAATG 64 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----T----------CE---ET---TEEEESSHHHHHHHHC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc-----c----------ce---eC---CeeccCCHHHHhhcCC
Confidence 4679999999 999999999999889998776664310 1 00 11 1222332344443 36
Q ss_pred ceEEeccccccccccccccc---ccceEEEecCCCCCC-H--HHHHHHHHCCCcee-ccc
Q psy8194 301 CDILIPAAIEDQITINNANN---VTAKIILEGANGPTT-T--EADDILRDKGIILA-PDV 353 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~---l~akiIvegAN~p~t-~--ea~~iL~~rGI~vi-PD~ 353 (428)
+|+.+-|..... ..+.+.. -+.+.+++.+-+... . +..++.+++|+.++ |..
T Consensus 65 ~D~viI~tP~~~-~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc 123 (288)
T 2nu8_A 65 ATASVIYVPAPF-CKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNT 123 (288)
T ss_dssp CCEEEECCCGGG-HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSC
T ss_pred CCEEEEecCHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 888887765432 2333222 356776664443322 2 44566778899665 554
No 257
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=93.71 E-value=0.02 Score=56.35 Aligned_cols=105 Identities=12% Similarity=0.197 Sum_probs=66.1
Q ss_pred ceEEEEeccHHHHH-HHH-HHHH-CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc-C
Q psy8194 225 SKISIQGFGNVGSV-AAN-LFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI-P 300 (428)
Q Consensus 225 ~~vaIqGfGnVG~~-~a~-~L~~-~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~-~ 300 (428)
.||+|+|+|++|+. .+. .|.. .++++++|+|.+ .+.. +. ...+++...++|.+++++. +
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~----------~~~~-~~------~~~~~~~~~~~~~~~ll~~~~ 65 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRH----------AKPE-EQ------APIYSHIHFTSDLDEVLNDPD 65 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSS----------CCGG-GG------SGGGTTCEEESCTHHHHTCTT
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCC----------HhHH-HH------HHhcCCCceECCHHHHhcCCC
Confidence 68999999999985 566 4333 589999999953 2222 11 1223445555557778764 7
Q ss_pred ceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHHCCCcee
Q psy8194 301 CDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~---iL~~rGI~vi 350 (428)
+|+++-|+. +..+.+.+... ...+++| -|+ + .++++ ..+++|+.+.
T Consensus 66 ~D~V~i~tp-~~~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~ 120 (345)
T 3f4l_A 66 VKLVVVCTH-ADSHFEYAKRALEAGKNVLVE---KPFTPTLAQAKELFALAKSKGLTVT 120 (345)
T ss_dssp EEEEEECSC-GGGHHHHHHHHHHTTCEEEEC---SSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCEEEEcCC-hHHHHHHHHHHHHcCCcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 999998884 33444444333 4578888 454 2 34443 4566787665
No 258
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.70 E-value=0.076 Score=52.91 Aligned_cols=73 Identities=32% Similarity=0.373 Sum_probs=48.0
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceec-cCCCcccc--
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI-NDSKEFWS-- 298 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i-~~~~~il~-- 298 (428)
+++++|+|.|.|.+|+.+++.+...|++|+ +.| .+.+++....+..+.- ...+ .+.+++.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~-v~d----------r~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 228 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQ-IFD----------INVERLSYLETLFGSR-----VELLYSNSAEIETAV 228 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHHGGG-----SEEEECCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHHhhCce-----eEeeeCCHHHHHHHH
Confidence 677999999999999999999999999765 777 4556665554432210 0011 10111111
Q ss_pred cCceEEeccccc
Q psy8194 299 IPCDILIPAAIE 310 (428)
Q Consensus 299 ~~~DIliPaA~~ 310 (428)
..+|++|.|+..
T Consensus 229 ~~~DvVI~~~~~ 240 (361)
T 1pjc_A 229 AEADLLIGAVLV 240 (361)
T ss_dssp HTCSEEEECCCC
T ss_pred cCCCEEEECCCc
Confidence 278999998853
No 259
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.67 E-value=0.061 Score=52.53 Aligned_cols=49 Identities=27% Similarity=0.410 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCC-----CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 209 IIGSKIASKINL-----NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 209 ~~~~~~~~~~g~-----~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
|+=.-+++.+|. .|+..+|+|+|.|-+|+.+++.|...|..-+.|.|.+
T Consensus 16 y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 16 PRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp ----------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred chHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 333444555443 4789999999999999999999999997555688743
No 260
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=93.67 E-value=0.096 Score=53.17 Aligned_cols=117 Identities=20% Similarity=0.216 Sum_probs=68.3
Q ss_pred ceEEEEec-cHHHHHHHHHHHHC-C-CEEEEE-EcCCCeeeCCCCCCHHHHHHHHHhcCC----CcC----------CC-
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKA-G-AKIVAI-QDDKTTIYNPNGFNIPKLQKYVTFTRS----IKD----------FN- 285 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~-G-akvVaV-sD~~G~i~n~~GlD~~~l~~~~~~~g~----l~~----------~~- 285 (428)
++|+|.|+ |.||+.+++.+.+. + .+++++ ++ .+++.+.+..++.+- +.+ ++
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag----------~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~ 74 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN----------RNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG 74 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES----------SCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTT
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcC----------CCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhcc
Confidence 78999999 99999999999885 3 788888 56 567766666554331 000 00
Q ss_pred -Cceecc---CCCcccccCceEEecccccccccccccccccc-eEEEecCCCCCC----HHHHHHHHHCCCceecc
Q psy8194 286 -EGEKIN---DSKEFWSIPCDILIPAAIEDQITINNANNVTA-KIILEGANGPTT----TEADDILRDKGIILAPD 352 (428)
Q Consensus 286 -~~~~i~---~~~~il~~~~DIliPaA~~~~It~~na~~l~a-kiIvegAN~p~t----~ea~~iL~~rGI~viPD 352 (428)
+.+.+. +..++++.++|+++.|..+..=-.-....+++ |-|+ -||-.+. ++..+..+++|+.++|-
T Consensus 75 ~~~~v~~g~~~~~el~~~~iDvVV~ai~G~aGl~ptlaAi~aGK~Vv-lANKE~lv~~G~~l~~~A~~~gv~liPV 149 (388)
T 1r0k_A 75 SSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVA-LANKESLVSAGGLMIDAVREHGTTLLPV 149 (388)
T ss_dssp CSSEEEESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEE-ECCSHHHHTTHHHHHHHHHHHTCEEEEC
T ss_pred CCcEEEeCccHHHHHHcCCCCEEEEeCCCHHHHHHHHHHHHCCCEEE-EeCcHHHHhhHHHHHHHHHHcCCEEEEe
Confidence 001110 01134555589999997552100111222333 3333 3577653 23345566789999986
No 261
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.58 E-value=0.16 Score=49.56 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=61.5
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCC----CEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAG----AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~G----akvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+.++|.|+|.|++|..+++.|.+.| ..|+ +.|.+ -+.+.+.++.+ .| ....+++.+..
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~-v~~r~--------~~~~~~~~l~~-~G-------~~~~~~~~e~~- 82 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIM-ASSPD--------MDLATVSALRK-MG-------VKLTPHNKETV- 82 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEE-EECSC--------TTSHHHHHHHH-HT-------CEEESCHHHHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEE-EECCC--------ccHHHHHHHHH-cC-------CEEeCChHHHh-
Confidence 4568999999999999999999999 5664 66642 11013333332 22 22222122332
Q ss_pred cCceEEecccccccccc---ccccccc-ceEEEecCCCCCCHHHHHHHHH
Q psy8194 299 IPCDILIPAAIEDQITI---NNANNVT-AKIILEGANGPTTTEADDILRD 344 (428)
Q Consensus 299 ~~~DIliPaA~~~~It~---~na~~l~-akiIvegAN~p~t~ea~~iL~~ 344 (428)
.+|||+|-|.....+.+ +-.+.++ -++|+.-+|+-...+..+.|.+
T Consensus 83 ~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~ 132 (322)
T 2izz_A 83 QHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSA 132 (322)
T ss_dssp HHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHT
T ss_pred ccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhh
Confidence 37999999887543322 1222332 4688988886544444566665
No 262
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=93.50 E-value=0.14 Score=47.85 Aligned_cols=101 Identities=19% Similarity=0.245 Sum_probs=59.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceEE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 304 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DIl 304 (428)
++|.|+|+|++|+.+++.|.+.|.+|+. .|.. -+.+.+.++.+. | .. ++.++.+ .+||++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~-~~~~--------~~~~~~~~~~~~-g-------~~--~~~~~~~-~~aDvv 60 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVT-SLEG--------RSPSTIERARTV-G-------VT--ETSEEDV-YSCPVV 60 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEE-CCTT--------CCHHHHHHHHHH-T-------CE--ECCHHHH-HTSSEE
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEE-eCCc--------cCHHHHHHHHHC-C-------Cc--CCHHHHH-hcCCEE
Confidence 4799999999999999999999998863 4531 134444444332 2 12 2244443 379999
Q ss_pred eccccccccccc---ccccccceEEEecCCCCC-C-HHHHHHHHHCC
Q psy8194 305 IPAAIEDQITIN---NANNVTAKIILEGANGPT-T-TEADDILRDKG 346 (428)
Q Consensus 305 iPaA~~~~It~~---na~~l~akiIvegAN~p~-t-~ea~~iL~~rG 346 (428)
+-|......... -.+.++. +|+.-++... + .+..+.+.++|
T Consensus 61 i~~v~~~~~~~~~~~~~~~~~~-~vi~~s~~~~~~~~~l~~~~~~~g 106 (264)
T 1i36_A 61 ISAVTPGVALGAARRAGRHVRG-IYVDINNISPETVRMASSLIEKGG 106 (264)
T ss_dssp EECSCGGGHHHHHHHHHTTCCS-EEEECSCCCHHHHHHHHHHCSSSE
T ss_pred EEECCCHHHHHHHHHHHHhcCc-EEEEccCCCHHHHHHHHHHHhhCC
Confidence 998876543222 1223333 8887754432 1 23334455555
No 263
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=93.45 E-value=0.077 Score=49.61 Aligned_cols=46 Identities=20% Similarity=0.358 Sum_probs=37.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
++++++++|.|. |-+|+++|+.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 51 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVA-IAD----------IDIERARQAAAE 51 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999997 8999999999999999986 555 355666665544
No 264
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.42 E-value=0.085 Score=45.37 Aligned_cols=106 Identities=9% Similarity=0.093 Sum_probs=60.8
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCC-HHHHHHHHHhcCCCcCCCCceecc-C--CCccc-
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFN-IPKLQKYVTFTRSIKDFNEGEKIN-D--SKEFW- 297 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD-~~~l~~~~~~~g~l~~~~~~~~i~-~--~~~il- 297 (428)
...+|+|.|+|.+|+.+++.|.+.|..|+.|.. | .+.+.+..+... .+...+. | ..+.|
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~-----------~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~ 65 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISN-----------LPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLK 65 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEEC-----------CCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEC-----------CChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHH
Confidence 456899999999999999999999999875543 2 233333322110 0111110 0 11222
Q ss_pred ---ccCceEEecccccccccc---cccccc--cceEEEecCCCCCCHHHHHHHHHCCCc
Q psy8194 298 ---SIPCDILIPAAIEDQITI---NNANNV--TAKIILEGANGPTTTEADDILRDKGII 348 (428)
Q Consensus 298 ---~~~~DIliPaA~~~~It~---~na~~l--~akiIvegAN~p~t~ea~~iL~~rGI~ 348 (428)
-.++|+++-|+.....|. ..+.++ ..++|+-. |.| +..+.|++-|+-
T Consensus 66 ~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~-~~~---~~~~~l~~~G~~ 120 (153)
T 1id1_A 66 KAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAV-SDS---KNLNKIKMVHPD 120 (153)
T ss_dssp HHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEEC-SSG---GGHHHHHTTCCS
T ss_pred HcChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEE-CCH---HHHHHHHHcCCC
Confidence 137899998876543332 334444 23666644 433 344667777874
No 265
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=93.34 E-value=0.068 Score=52.86 Aligned_cols=106 Identities=17% Similarity=0.242 Sum_probs=68.1
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|.+ . +.. + ++ . . +..++.++++ .
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~-------~-~~~-~----~~-~--~-----~~~~~l~ell-~ 198 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVI-TYDIF-------R-NPE-L----EK-K--G-----YYVDSLDDLY-K 198 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS-------C-CHH-H----HH-T--T-----CBCSCHHHHH-H
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCC-------c-chh-H----Hh-h--C-----eecCCHHHHH-h
Confidence 46899999999999999999999999999986 45532 1 111 1 11 1 1 1121134445 3
Q ss_pred CceEEeccccc-----cccccccccccc-ceEEEecCCCCC-CH-HHHHHHHHCCCc
Q psy8194 300 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~~-----~~It~~na~~l~-akiIvegAN~p~-t~-ea~~iL~~rGI~ 348 (428)
.||+++-|... +.|+++....++ -.+++.-+-+++ .. +..+.|++..|.
T Consensus 199 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ 255 (333)
T 1j4a_A 199 QADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIF 255 (333)
T ss_dssp HCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 79999988753 334444444443 356777776764 44 445788887665
No 266
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.31 E-value=0.078 Score=51.30 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 254 (428)
++++|++|+|+|.|.||...++.|.+.|++|+-|+
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtVia 43 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVS 43 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEc
Confidence 36899999999999999999999999999987554
No 267
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.08 E-value=0.089 Score=49.50 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=31.2
Q ss_pred CCCCCceEEEEecc---HHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 220 LNIINSKISIQGFG---NVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 220 ~~l~g~~vaIqGfG---nVG~~~a~~L~~~GakvVaVsD~ 256 (428)
.+|+||+++|.|.+ -+|+.+|+.|.+.|++|+ ++|.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vv-i~~r 40 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLV-FTYR 40 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEE-EEEC
Confidence 37899999999974 599999999999999986 6664
No 268
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=93.07 E-value=0.84 Score=45.52 Aligned_cols=36 Identities=31% Similarity=0.602 Sum_probs=29.4
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 256 (428)
-+.-.||+|=|||-+|+.+++.+.+. ...||+|.|.
T Consensus 8 ~~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~ 44 (345)
T 2b4r_O 8 HMAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDP 44 (345)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT
T ss_pred chhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCC
Confidence 45678999999999999999998775 4799999993
No 269
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=93.06 E-value=0.49 Score=46.38 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=44.0
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCceEEEEecc-HHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 199 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFG-NVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 199 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfG-nVG~~~a~~L~~~GakvVaVsD~ 256 (428)
-.+.|-+|+.. ++++++.+++|++++|+|-+ -||+-+|.+|.+.++.| .++.+
T Consensus 158 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATV-Ti~Hs 211 (303)
T 4b4u_A 158 YGSATPAGIMT----ILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATV-TICHS 211 (303)
T ss_dssp CCCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEE-EEECT
T ss_pred ccCccHHHHHH----HHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEE-EEecC
Confidence 34688887765 55678999999999999985 57999999999999998 48775
No 270
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.98 E-value=0.16 Score=51.04 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=32.0
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
++.+.+|+|+|+|.+|..+++.+...|++| .+.|.+
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V-~~~d~~ 204 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVV-MATDVR 204 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEE-EEECSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEE-EEEeCC
Confidence 568999999999999999999999999985 577853
No 271
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.96 E-value=0.097 Score=51.68 Aligned_cols=95 Identities=12% Similarity=0.080 Sum_probs=56.5
Q ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC------ceeccCCCccccc
Q psy8194 226 KISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE------GEKINDSKEFWSI 299 (428)
Q Consensus 226 ~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~------~~~i~~~~~il~~ 299 (428)
+|+|+|.|++|..+|..|.+.|..|+ +.| .+.+.+.++.+........++ ....++..+.+ .
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~-~~~----------r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 84 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVC-VWH----------MNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-N 84 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEE-EEC----------SCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-T
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEE-EEE----------CCHHHHHHHHHcCcccccccccccccceeeeCCHHHHH-c
Confidence 89999999999999999999998874 666 345555555544322211111 12222122222 3
Q ss_pred CceEEecccccccccccccc--------ccc--ceEEEecCCCC
Q psy8194 300 PCDILIPAAIEDQITINNAN--------NVT--AKIILEGANGP 333 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~--------~l~--akiIvegAN~p 333 (428)
+||++|-|.....+ .+-+. .++ -++|+.-.|+-
T Consensus 85 ~aDvVilav~~~~~-~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 85 GAEIILFVIPTQFL-RGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp TCSSEEECCCHHHH-HHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred CCCEEEECCChHHH-HHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 78999988765332 22222 232 35777777753
No 272
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=92.82 E-value=0.18 Score=51.09 Aligned_cols=116 Identities=12% Similarity=0.060 Sum_probs=72.6
Q ss_pred CCCceEEEEeccH---HHHHHHHHHHHCC-CEEEE-EEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcc
Q psy8194 222 IINSKISIQGFGN---VGSVAANLFFKAG-AKIVA-IQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 296 (428)
Q Consensus 222 l~g~~vaIqGfGn---VG~~~a~~L~~~G-akvVa-VsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~i 296 (428)
++..||+|+|+|+ +|..-+..+...+ +++|+ |+| .|.+...+..++.|- +....++|.+++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d----------~~~~~a~~~a~~~g~----~~~~~~~~~~~l 100 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALS----------STPEKAEASGRELGL----DPSRVYSDFKEM 100 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECC----------SSHHHHHHHHHHHTC----CGGGBCSCHHHH
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeC----------CCHHHHHHHHHHcCC----CcccccCCHHHH
Confidence 4568999999999 9988887776655 78886 899 678888877776542 111233435667
Q ss_pred ccc------CceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCceecc
Q psy8194 297 WSI------PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAPD 352 (428)
Q Consensus 297 l~~------~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~viPD 352 (428)
++. ++|+++-|+... .+.+.+... ..-++||=.=.....++.+ ..+++|+.+.-.
T Consensus 101 l~~~~~~~~~vD~V~I~tp~~-~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~ 167 (417)
T 3v5n_A 101 AIREAKLKNGIEAVAIVTPNH-VHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLT 167 (417)
T ss_dssp HHHHHHCTTCCSEEEECSCTT-SHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEE
T ss_pred HhcccccCCCCcEEEECCCcH-HHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 753 589999877543 444433332 4468888421112234544 356678766543
No 273
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=92.73 E-value=0.051 Score=50.73 Aligned_cols=52 Identities=19% Similarity=0.179 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHH--HHCCCEEEEEEcC
Q psy8194 204 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLF--FKAGAKIVAIQDD 256 (428)
Q Consensus 204 g~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L--~~~GakvVaVsD~ 256 (428)
||-|-.-.+..-+.+|.+ +..+|+|.|.|+.|+.+++.+ .+.|.++||+.|.
T Consensus 65 GY~V~~L~~~i~~~Lg~~-~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~ 118 (212)
T 3keo_A 65 GYDVKKLMNFFAEILNDH-STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL 118 (212)
T ss_dssp SEEHHHHHHHHHHHTTTT-SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC
T ss_pred CEEHHHHHHHHHHHhCCC-CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC
Confidence 566666666666667766 667999999999999999974 4568999999994
No 274
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=92.71 E-value=2.3 Score=42.14 Aligned_cols=43 Identities=19% Similarity=0.398 Sum_probs=33.9
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYV 275 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~ 275 (428)
.||.|-|||.+|+.+.|.+.+. ...||+|-|.. .|++.+.-+.
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~--------~d~~~~a~l~ 45 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPF--------ITNDYAAYMF 45 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTT--------CCHHHHHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCC--------CCHHHHHHHh
Confidence 4899999999999999988776 58999999842 4776654433
No 275
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.61 E-value=0.21 Score=51.92 Aligned_cols=42 Identities=17% Similarity=0.360 Sum_probs=34.6
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHH
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 276 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~ 276 (428)
-++|+|+|.|++|+.+|..|.+.|..|+ +.| .+.+++.+..+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~-l~D----------~~~e~l~~~~~ 46 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVL-LYD----------ISAEALTRAID 46 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SCHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEE-EEE----------CCHHHHHHHHH
Confidence 3589999999999999999999999985 777 66776666543
No 276
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.59 E-value=0.098 Score=49.00 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=36.7
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|. +.+.+.+..++
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~-~~~r----------~~~~~~~~~~~ 51 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVL-LTGR----------NESNIARIREE 51 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEES----------CHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC----------CHHHHHHHHHH
Confidence 578999999997 8899999999999999987 5552 45566555544
No 277
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.58 E-value=0.2 Score=50.78 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=31.1
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
+.+.+|+|+|+|.+|..+++.+...|++| .++|.+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V-~v~D~~ 204 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIV-RAFDTR 204 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEE-EEECSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEE-EEEcCC
Confidence 67899999999999999999999999986 477843
No 278
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=92.56 E-value=0.33 Score=41.99 Aligned_cols=111 Identities=12% Similarity=0.164 Sum_probs=65.5
Q ss_pred CceEEEEec----cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 224 NSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 224 g~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
-++|+|+|. |+.|..+++.|.+.|++|. ..| |+.. ...+. +...+++.+++- .
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~-~vn-------p~~~-----------g~~i~---G~~~~~sl~el~-~ 69 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVI-PVS-------PKVA-----------GKTLL---GQQGYATLADVP-E 69 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEE-EEC-------SSST-----------TSEET---TEECCSSTTTCS-S
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEE-EeC-------Cccc-----------ccccC---CeeccCCHHHcC-C
Confidence 578999999 8999999999999999854 333 2210 00111 223333233443 3
Q ss_pred CceEEeccccccccccccccc---ccce-EEEecCCCCCCHHHHHHHHHCCCceeccccccccchhhh
Q psy8194 300 PCDILIPAAIEDQITINNANN---VTAK-IILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVS 363 (428)
Q Consensus 300 ~~DIliPaA~~~~It~~na~~---l~ak-iIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s 363 (428)
++|+.+-|.... ...+.+.. ..+| +++.. +-.+.+..++++++|+.++ --|+-|++..
T Consensus 70 ~~Dlvii~vp~~-~v~~v~~~~~~~g~~~i~i~~--~~~~~~l~~~a~~~Gi~~i---gpnc~g~~~~ 131 (145)
T 2duw_A 70 KVDMVDVFRNSE-AAWGVAQEAIAIGAKTLWLQL--GVINEQAAVLAREAGLSVV---MDRCPAIELP 131 (145)
T ss_dssp CCSEEECCSCST-HHHHHHHHHHHHTCCEEECCT--TCCCHHHHHHHHTTTCEEE---CSCCHHHHST
T ss_pred CCCEEEEEeCHH-HHHHHHHHHHHcCCCEEEEcC--ChHHHHHHHHHHHcCCEEE---cCCeeeEEcc
Confidence 678877766532 22222221 2333 44442 2237788889999999986 2366676654
No 279
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.46 E-value=0.97 Score=44.03 Aligned_cols=109 Identities=15% Similarity=0.124 Sum_probs=60.9
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCce
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 302 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~D 302 (428)
.|.+|+|.|.|.||..+++++...|++|+++.-+ .+++... ++.|. ...+. ..+.+...+|
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~-----------~~~~~~~-~~lGa------~~v~~-~~~~~~~~~D 236 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARN-----------EHKKQDA-LSMGV------KHFYT-DPKQCKEELD 236 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSS-----------STTHHHH-HHTTC------SEEES-SGGGCCSCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCC-----------HHHHHHH-HhcCC------CeecC-CHHHHhcCCC
Confidence 6889999999999999999999999999865422 1222222 22331 11123 2223333889
Q ss_pred EEecccccccccccccccc--cceEEEecCCC--CCC-HHHHHHHHHCCCcee
Q psy8194 303 ILIPAAIEDQITINNANNV--TAKIILEGANG--PTT-TEADDILRDKGIILA 350 (428)
Q Consensus 303 IliPaA~~~~It~~na~~l--~akiIvegAN~--p~t-~ea~~iL~~rGI~vi 350 (428)
+++.|+.....-......+ ..++|.=|... +.+ .....++..+++.+.
T Consensus 237 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~ 289 (348)
T 3two_A 237 FIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVY 289 (348)
T ss_dssp EEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEE
T ss_pred EEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEE
Confidence 9998886542222222333 44555544322 233 222334435666554
No 280
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=92.43 E-value=0.13 Score=48.79 Aligned_cols=46 Identities=17% Similarity=0.304 Sum_probs=36.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
+++|++++|.|. |.+|+++|+.|.+.|++|+ +.| .+.+++.+..++
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~~ 48 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVA-VLD----------KSAERLRELEVA 48 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999997 8899999999999999997 455 355666665554
No 281
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.39 E-value=0.23 Score=47.84 Aligned_cols=109 Identities=16% Similarity=0.155 Sum_probs=62.6
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCc-C--CCCceecc--CCCccccc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK-D--FNEGEKIN--DSKEFWSI 299 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~-~--~~~~~~i~--~~~~il~~ 299 (428)
++|+|+|.|++|+.+|..|.+.|..|+ +.|.. .+.+.+.++.+....+. + ++.....+ +..+.+ .
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~-~~~r~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVR-IWGTE--------FDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-E 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEE-EECCG--------GGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-T
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEE-EEEcc--------CCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHH-h
Confidence 479999999999999999999999875 66630 04455555443321111 0 00011111 111222 4
Q ss_pred CceEEecccccccccc---ccccccc-ceEEEecCCCC------CCHHHHHHHHH
Q psy8194 300 PCDILIPAAIEDQITI---NNANNVT-AKIILEGANGP------TTTEADDILRD 344 (428)
Q Consensus 300 ~~DIliPaA~~~~It~---~na~~l~-akiIvegAN~p------~t~ea~~iL~~ 344 (428)
+||+++-|.....+.+ +-.+ ++ -++|+.-.|+- ......+.+.+
T Consensus 71 ~~D~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 71 NAEVVLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp TCSEEEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred cCCEEEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 7999999887654322 1223 43 35788888875 23444566655
No 282
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=92.37 E-value=0.14 Score=48.74 Aligned_cols=47 Identities=23% Similarity=0.342 Sum_probs=37.7
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
.++++++++|.|. |-+|+++|+.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 70 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVV-VAD----------VNEDAAVRVANE 70 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE----------SSHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 4689999999997 8999999999999999987 555 345666665554
No 283
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=92.25 E-value=1.4 Score=43.71 Aligned_cols=42 Identities=21% Similarity=0.396 Sum_probs=33.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHC---CCEEEEEEcCCCeeeCCCCCCHHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDDKTTIYNPNGFNIPKLQKYV 275 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~---GakvVaVsD~~G~i~n~~GlD~~~l~~~~ 275 (428)
.||.|-|||-+|+.+.|.+.+. ...||+|-|. .|++.+.-+.
T Consensus 3 ~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~---------~d~~~~a~l~ 47 (335)
T 3doc_A 3 VRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL---------GPVETNAHLL 47 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS---------SCHHHHHHHH
T ss_pred EEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC---------CCHHHHHHHh
Confidence 4899999999999999988876 4789999984 4766654333
No 284
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=92.18 E-value=0.13 Score=48.95 Aligned_cols=46 Identities=17% Similarity=0.262 Sum_probs=36.6
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.| .+.+++.+..++
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~-~~~----------r~~~~~~~~~~~ 59 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVI-MAV----------RDTRKGEAAART 59 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHH
Confidence 689999999998 8999999999999999987 445 345555555443
No 285
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=92.12 E-value=0.12 Score=48.86 Aligned_cols=46 Identities=22% Similarity=0.331 Sum_probs=37.0
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.| .+.+++.+..++
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~~ 70 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVG-LHG----------TREDKLKEIAAD 70 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 688999999997 8899999999999999986 555 345666665544
No 286
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=92.03 E-value=0.1 Score=50.99 Aligned_cols=108 Identities=15% Similarity=0.101 Sum_probs=66.0
Q ss_pred ceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc------
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW------ 297 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il------ 297 (428)
+||+|+|+ |.+|...++.|.+.+.++++|+|.+- +. .... ..|++.+.+++.++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~----------~~-~~~~------~~~~~~~~~~~~~~ll~~~~~l 66 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDIND----------SV-GIID------SISPQSEFFTEFEFFLDHASNL 66 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSC----------CC-GGGG------GTCTTCEEESSHHHHHHHHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCH----------HH-HHHH------hhCCCCcEECCHHHHHHhhhhh
Confidence 68999999 78999999999989999999999641 11 0111 1234455554345555
Q ss_pred ----ccCceEEecccccccccccccccc---cceEEEecCCCCCCHHHHH---HHHHCCCcee
Q psy8194 298 ----SIPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILA 350 (428)
Q Consensus 298 ----~~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~---iL~~rGI~vi 350 (428)
..++|+++-|+. +..+.+.+... ...++||=.=.....|+++ ..+++|+.+.
T Consensus 67 ~~~~~~~vD~V~I~tP-~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 128 (318)
T 3oa2_A 67 KRDSATALDYVSICSP-NYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLY 128 (318)
T ss_dssp TTSTTTSCCEEEECSC-GGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred hhccCCCCcEEEECCC-cHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEE
Confidence 467888887764 34444443332 4567787522222244443 3455676554
No 287
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=92.01 E-value=0.17 Score=47.02 Aligned_cols=47 Identities=26% Similarity=0.287 Sum_probs=37.3
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
.++++++++|.|. |.+|+++|+.|.+.|++|+ +.| -+.+.+.+..++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 52 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVV-IVD----------RDKAGAERVAGE 52 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEc----------CCHHHHHHHHHH
Confidence 4678999999997 7899999999999999987 455 345566665554
No 288
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.98 E-value=0.41 Score=40.56 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=62.3
Q ss_pred CceEEEEec----cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccccc
Q psy8194 224 NSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 299 (428)
Q Consensus 224 g~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~ 299 (428)
-++|+|+|. +.+|..+.+.|.+.|++|..|- |.+ ..+.+. +.+.+..++-+.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVn--------P~~-------------~~i~G~---~~y~sl~dlp~v 59 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVG--------RKK-------------GEVLGK---TIINERPVIEGV 59 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEES--------SSC-------------SEETTE---ECBCSCCCCTTC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEEC--------CCC-------------CcCCCe---eccCChHHCCCC
Confidence 368999998 7899999999999999886553 332 112111 111112222221
Q ss_pred C-ceEEecccc-cccccccccccccceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhh
Q psy8194 300 P-CDILIPAAI-EDQITINNANNVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIV 362 (428)
Q Consensus 300 ~-~DIliPaA~-~~~It~~na~~l~akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~ 362 (428)
| ++|++|+.. ..++.+ +.+.++|.|+= .-+...+|+.++.++.||.++| |+-||..
T Consensus 60 Dlavi~~p~~~v~~~v~e--~~~~g~k~v~~-~~G~~~~e~~~~a~~~Girvv~----nC~gv~l 117 (122)
T 3ff4_A 60 DTVTLYINPQNQLSEYNY--ILSLKPKRVIF-NPGTENEELEEILSENGIEPVI----GCTLVML 117 (122)
T ss_dssp CEEEECSCHHHHGGGHHH--HHHHCCSEEEE-CTTCCCHHHHHHHHHTTCEEEE----SCHHHHH
T ss_pred CEEEEEeCHHHHHHHHHH--HHhcCCCEEEE-CCCCChHHHHHHHHHcCCeEEC----CcCeEEe
Confidence 1 344444432 333332 22233343432 2234578999999999999984 6766654
No 289
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=91.93 E-value=0.13 Score=47.88 Aligned_cols=34 Identities=29% Similarity=0.455 Sum_probs=30.1
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 36 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVV-LAD 36 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 478999999998 8999999999999999987 445
No 290
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=91.82 E-value=2 Score=42.64 Aligned_cols=41 Identities=29% Similarity=0.483 Sum_probs=32.9
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKY 274 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~ 274 (428)
.||.|-|||.+|+.+.|.+.+. ...||+|-|. .|++.+.-+
T Consensus 5 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~---------~d~~~~a~l 46 (338)
T 3lvf_P 5 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL---------TDDDMLAHL 46 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS---------SCHHHHHHH
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCceEEEEecC---------CCHHHHHHH
Confidence 5899999999999999988776 4789999983 576665433
No 291
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.77 E-value=0.72 Score=43.82 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=30.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.+++++|+|.|. |-+|+++++.|.+.|++|+++..
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 367899999998 99999999999999999986553
No 292
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=91.66 E-value=0.12 Score=49.20 Aligned_cols=46 Identities=13% Similarity=0.199 Sum_probs=36.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~~ 72 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVL-CAD----------IDGDAADAAATK 72 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEE-EEE----------SSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 589999999997 7899999999999999987 555 355566555544
No 293
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=91.60 E-value=0.21 Score=46.57 Aligned_cols=34 Identities=29% Similarity=0.426 Sum_probs=30.3
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 43 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVA-IAD 43 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999997 8999999999999999987 445
No 294
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=91.57 E-value=2 Score=42.83 Aligned_cols=41 Identities=27% Similarity=0.518 Sum_probs=33.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKY 274 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~ 274 (428)
.||.|-|||-+|+.+.|.+.+. ...||+|-|. .|++.+.-+
T Consensus 5 ~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~---------~d~~~~a~l 46 (345)
T 4dib_A 5 TRVAINGFGRIGRMVFRQAIKESAFEIVAINAS---------YPSETLAHL 46 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS---------SCHHHHHHH
T ss_pred EEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC---------CCHHHHHHH
Confidence 5899999999999999988775 5899999984 576665433
No 295
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=91.53 E-value=0.56 Score=46.93 Aligned_cols=34 Identities=38% Similarity=0.616 Sum_probs=30.1
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
...+|+|-|||.||+.+.+.|.+....||+|-|.
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~~~~ivaIndl 53 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFERGIDIVAINDL 53 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCeEEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3579999999999999999999989999999984
No 296
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=91.53 E-value=0.16 Score=49.22 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=59.8
Q ss_pred CCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
+..||+|+|+ |+.|+.+++.|.+.|.++|+..+.+.. | ..+. +...+++.+++.. .+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~-----g-------------~~i~---G~~vy~sl~el~~~~~ 64 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKG-----G-------------MEVL---GVPVYDTVKEAVAHHE 64 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----T-------------CEET---TEEEESSHHHHHHHSC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCC-----C-------------ceEC---CEEeeCCHHHHhhcCC
Confidence 4679999999 999999999999999997755553210 0 0011 1222221233332 26
Q ss_pred ceEEecccccccccccccc---cccceEEEecC-CCCCC--HHHHHHHHHCCCcee
Q psy8194 301 CDILIPAAIEDQITINNAN---NVTAKIILEGA-NGPTT--TEADDILRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na~---~l~akiIvegA-N~p~t--~ea~~iL~~rGI~vi 350 (428)
+|+.+-+..... ..+.+. +.+.+.++..+ ..+.+ .+..++.++.|+.++
T Consensus 65 ~Dv~Ii~vp~~~-~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 65 VDASIIFVPAPA-AADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp CSEEEECCCHHH-HHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCEEEEecCHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 787776654322 222222 23566444333 33322 245567778899665
No 297
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=91.52 E-value=0.54 Score=44.62 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=32.0
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
+|+|++++|.|. +-+|+.+|+.|.+.|++|+ ++|.+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vv-i~~r~ 42 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVV-CAARR 42 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEESS
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEE-EEeCC
Confidence 789999999998 6899999999999999986 67753
No 298
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.46 E-value=0.33 Score=50.02 Aligned_cols=117 Identities=16% Similarity=0.141 Sum_probs=77.7
Q ss_pred HHHHHHHhCC-CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCcee
Q psy8194 211 GSKIASKINL-NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEK 289 (428)
Q Consensus 211 ~~~~~~~~g~-~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~ 289 (428)
++..++.+|. +-.-++|.|.|.|++|..+|+.|. .+..|. |.+ -|.+....+.++. ++...
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~-~~~~v~-iIE----------~d~~r~~~la~~l------~~~~V 282 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLE-QTYSVK-LIE----------RNLQRAEKLSEEL------ENTIV 282 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHT-TTSEEE-EEE----------SCHHHHHHHHHHC------TTSEE
T ss_pred HHHHHHhhccccccccEEEEEcchHHHHHHHHHhh-hcCceE-EEe----------cCHHHHHHHHHHC------CCceE
Confidence 4566666665 334579999999999999999985 456664 666 5777777776653 23332
Q ss_pred cc-C--CCcccc----cCceEEecccc---cccccccccccccceEEEecCCCCCCHHHHHHHHHCCCc
Q psy8194 290 IN-D--SKEFWS----IPCDILIPAAI---EDQITINNANNVTAKIILEGANGPTTTEADDILRDKGII 348 (428)
Q Consensus 290 i~-~--~~~il~----~~~DIliPaA~---~~~It~~na~~l~akiIvegAN~p~t~ea~~iL~~rGI~ 348 (428)
+- | ..++|. .++|+++.++- .|.+..--|.++.++-++--.|.| +-.+++++-||-
T Consensus 283 i~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~---~~~~l~~~~gid 348 (461)
T 4g65_A 283 FCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRG---AYVDLVQGGVID 348 (461)
T ss_dssp EESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCH---HHHHHHCSSSSC
T ss_pred EeccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCcccccccccc---chhhhhhccccc
Confidence 21 1 223442 47999999886 466667778888776666666654 444566666663
No 299
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.44 E-value=0.1 Score=47.99 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=60.6
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc----cc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW----SI 299 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il----~~ 299 (428)
..+|+|.|+|.+|+.+++.|.+.|. |+ +.| -|.+.+.+.. .+ +.-+. +.. + ..+.| -.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~-vid----------~~~~~~~~~~--~~-~~~i~-gd~-~-~~~~l~~a~i~ 70 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FV-LAE----------DENVRKKVLR--SG-ANFVH-GDP-T-RVSDLEKANVR 70 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EE-EES----------CGGGHHHHHH--TT-CEEEE-SCT-T-CHHHHHHTTCT
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EE-EEE----------CCHHHHHHHh--cC-CeEEE-cCC-C-CHHHHHhcCcc
Confidence 4589999999999999999999998 65 666 3444444433 22 10000 000 1 11222 13
Q ss_pred CceEEecccccccc---ccccccccc--ceEEEecCCCCCCHHHHHHHHHCCCc
Q psy8194 300 PCDILIPAAIEDQI---TINNANNVT--AKIILEGANGPTTTEADDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~~~~I---t~~na~~l~--akiIvegAN~p~t~ea~~iL~~rGI~ 348 (428)
++|.++-|+..... ....+.++. .++|+...| ++..+.|++.|+-
T Consensus 71 ~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~----~~~~~~l~~~G~~ 120 (234)
T 2aef_A 71 GARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER----YENIEQLRMAGAD 120 (234)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEECSS----GGGHHHHHHHTCS
T ss_pred hhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEEECC----HhHHHHHHHCCCC
Confidence 78999988765433 334455443 477776643 3344677777874
No 300
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.35 E-value=0.15 Score=49.85 Aligned_cols=104 Identities=18% Similarity=0.111 Sum_probs=56.6
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCC-------CEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCC------cee
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAG-------AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE------GEK 289 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~G-------akvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~------~~~ 289 (428)
..++|+|+|.|++|..+|..|.+.| ..| .+.|.+... .+- ..+..+.+........++ ...
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V-~~~~r~~~~---~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRV-TMWVFEEDI---GGK--KLTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEE-EEECCCCBS---SSS--BHHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeE-EEEEcChhh---hhh--HHHHHHHhcCcccccCCcccCccCeEE
Confidence 3468999999999999999999988 676 466643221 000 022233222211111111 121
Q ss_pred ccCCCcccccCceEEecccccccccc---ccccccc-ceEEEecCCCC
Q psy8194 290 INDSKEFWSIPCDILIPAAIEDQITI---NNANNVT-AKIILEGANGP 333 (428)
Q Consensus 290 i~~~~~il~~~~DIliPaA~~~~It~---~na~~l~-akiIvegAN~p 333 (428)
.++.++.+ .+||++|-|.....+.+ +-.+.++ -.+|+.-.|+-
T Consensus 81 ~~~~~~~~-~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi 127 (354)
T 1x0v_A 81 VPDVVQAA-EDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGV 127 (354)
T ss_dssp ESSHHHHH-TTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCB
T ss_pred EcCHHHHH-cCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCcc
Confidence 22122222 37999999987644321 1122232 35888888864
No 301
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.33 E-value=0.33 Score=46.15 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=37.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHH
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 276 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~ 276 (428)
+|+||+++|.|. +.+|+.+|+.|.+.|++|+ ++| .+.+++.+..+
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv-~~~----------~~~~~~~~~~~ 49 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVV-AVE----------LLEDRLNQIVQ 49 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEE----------CCHHHHHHHHH
Confidence 689999999998 6799999999999999986 677 56666665544
No 302
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.33 E-value=0.41 Score=46.49 Aligned_cols=99 Identities=16% Similarity=0.218 Sum_probs=58.6
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCce------eccCCC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGE------KINDSK 294 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~------~i~~~~ 294 (428)
+...++|+|+|.|++|..+|..|.+.|..|+.+. +.+.+.+..+++-.+. .++.. ..++.+
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~~------------~~~~~~~i~~~g~~~~-~~~~~~~~~~~~~~~~~ 82 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILIA------------RPQHVQAIEATGLRLE-TQSFDEQVKVSASSDPS 82 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEEC------------CHHHHHHHHHHCEEEE-CSSCEEEECCEEESCGG
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEEE------------cHhHHHHHHhCCeEEE-cCCCcEEEeeeeeCCHH
Confidence 4577899999999999999999999999886552 2234444444321221 12211 122122
Q ss_pred cccccCceEEecccccccccccccccc----c-ceEEEecCCCCCC
Q psy8194 295 EFWSIPCDILIPAAIEDQITINNANNV----T-AKIILEGANGPTT 335 (428)
Q Consensus 295 ~il~~~~DIliPaA~~~~It~~na~~l----~-akiIvegAN~p~t 335 (428)
+ . .+||++|-|.....+ .+.+..+ + -.+|+-..|+--.
T Consensus 83 ~-~-~~~D~vilavk~~~~-~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 83 A-V-QGADLVLFCVKSTDT-QSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp G-G-TTCSEEEECCCGGGH-HHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred H-c-CCCCEEEEEcccccH-HHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 2 2 589999998876643 3333333 2 3478888887654
No 303
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=91.30 E-value=0.15 Score=46.97 Aligned_cols=47 Identities=28% Similarity=0.410 Sum_probs=37.3
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
.++++++|+|.|. |.+|+++|+.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 57 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVI-ISG----------SNEEKLKSLGNA 57 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEc----------CCHHHHHHHHHH
Confidence 3679999999997 8999999999999999987 455 245566665544
No 304
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.26 E-value=0.23 Score=45.31 Aligned_cols=37 Identities=30% Similarity=0.401 Sum_probs=28.0
Q ss_pred CCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 219 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 219 g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+..+..++|.|+|.|++|+.+|+.|.+.|.+|+ +.|.
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~-~~~~ 50 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVT-YYGS 50 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEE-EECT
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 446788999999999999999999999999885 5564
No 305
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=91.13 E-value=0.19 Score=46.57 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=29.6
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 253 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIA 37 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 578999999997 899999999999999998744
No 306
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.09 E-value=0.23 Score=45.19 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=29.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++|+|.|. |.+|+++++.|.+.|++|++++-
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC
Confidence 578999999998 99999999999999999986653
No 307
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=91.08 E-value=0.21 Score=43.76 Aligned_cols=31 Identities=32% Similarity=0.402 Sum_probs=28.2
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
..|+|+|.|..|..+|..|.+.|.+|+ |.|.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~-v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVH-LFDK 33 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEE-EECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEE-EEEC
Confidence 359999999999999999999999985 8885
No 308
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=91.04 E-value=0.12 Score=48.21 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=25.9
Q ss_pred hCCCCCCceEEEEeccHHHHHHHHH--HHHCCCEEEEEEcC
Q psy8194 218 INLNIINSKISIQGFGNVGSVAANL--FFKAGAKIVAIQDD 256 (428)
Q Consensus 218 ~g~~l~g~~vaIqGfGnVG~~~a~~--L~~~GakvVaVsD~ 256 (428)
+|.+ +..+|+|.|.|++|+.+++. +...|.++|++.|.
T Consensus 80 lg~~-~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~ 119 (215)
T 2vt3_A 80 LDQD-EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI 119 (215)
T ss_dssp HHHC----CEEEECCSHHHHHHHHCC------CCEEEEEES
T ss_pred hCcC-CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC
Confidence 4443 44789999999999999994 44568999999994
No 309
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.95 E-value=0.75 Score=47.34 Aligned_cols=30 Identities=27% Similarity=0.498 Sum_probs=27.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
++|+|+|.|.+|..+|..|.+.|..|+ +.|
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~-l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVV-AVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEE-EEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEE-EEE
Confidence 589999999999999999999999885 667
No 310
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=90.91 E-value=0.097 Score=48.81 Aligned_cols=35 Identities=11% Similarity=0.414 Sum_probs=30.2
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.++++++++|.|. |-+|+++|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 38 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLD 38 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3678999999998 8999999999999999987443
No 311
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=90.91 E-value=0.14 Score=47.55 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=30.3
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~-~~~ 40 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVI-GTA 40 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999997 8899999999999999987 445
No 312
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=90.87 E-value=0.14 Score=48.38 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=31.5
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
.++++++++|.|. |-+|+++|+.|.+.|++|+ +.|.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~r 43 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVV-LADL 43 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEEC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEcC
Confidence 4689999999998 8999999999999999986 5553
No 313
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.81 E-value=0.31 Score=46.34 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=37.0
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHH
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 275 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~ 275 (428)
+|+|++++|.|. +.+|+.+|+.|.+.|++|+ ++| .+.+++.+..
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv-i~~----------~~~~~~~~~~ 50 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVI-LND----------IRATLLAESV 50 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-ECC----------SCHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHH
Confidence 789999999998 7799999999999999985 777 5666665544
No 314
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.73 E-value=0.52 Score=46.57 Aligned_cols=76 Identities=20% Similarity=0.127 Sum_probs=46.6
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCC-CCceeccCCCcccc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-NEGEKINDSKEFWS 298 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~-~~~~~i~~~~~il~ 298 (428)
-.+++|+|+|.|+||+.+|..|...|. .+ .+.| ++.+++......-.....| +..+..++..+- -
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el-~l~D----------~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a-~ 74 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEI-GIVD----------IFKDKTKGDAIDLEDALPFTSPKKIYSAEYSD-A 74 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEE-EEEC----------SCHHHHHHHHHHHHTTGGGSCCCEEEECCGGG-G
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeE-EEEe----------CChHHHHHHHhhHhhhhhhcCCcEEEECcHHH-h
Confidence 356899999999999999999988775 55 4778 5666555332211101112 222333312222 3
Q ss_pred cCceEEecccc
Q psy8194 299 IPCDILIPAAI 309 (428)
Q Consensus 299 ~~~DIliPaA~ 309 (428)
.+|||+|-++.
T Consensus 75 ~~aDiVvi~ag 85 (326)
T 3vku_A 75 KDADLVVITAG 85 (326)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 58999888775
No 315
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.68 E-value=0.33 Score=47.57 Aligned_cols=148 Identities=14% Similarity=0.123 Sum_probs=81.5
Q ss_pred ecccccCCCcCCCCChhHHHHHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHHHHH-CCCEEEEEEcCCCeeeCCCC
Q psy8194 187 TGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNG 265 (428)
Q Consensus 187 tGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD~~G~i~n~~G 265 (428)
||.|..+ .+-...|++=...+---+.+++-. ...+++.|+|.|..|+..++.|.+ .+.+-|.|.|.+
T Consensus 88 tG~p~a~---ld~~~lT~~RTaA~s~laa~~La~-~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------- 155 (313)
T 3hdj_A 88 DGRPLAT---CDAGTLTRKRTAACTVLAAGALAR-PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-------- 155 (313)
T ss_dssp TCCEEEE---ECSHHHHHHHHHHHHHHHHHHHSC-TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--------
T ss_pred CCCEEEE---EcCchhhhHHHHHHHHHHHHhhcc-CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--------
Confidence 5666532 222344554443333334455543 256899999999999999998877 455555677754
Q ss_pred CCHHHHHHHHH-hcCCCcCCCCceeccCCCcccccCceEEeccccc--ccccccccccccceEEEecCCCCCCHHHHHHH
Q psy8194 266 FNIPKLQKYVT-FTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIE--DQITINNANNVTAKIILEGANGPTTTEADDIL 342 (428)
Q Consensus 266 lD~~~l~~~~~-~~g~l~~~~~~~~i~~~~~il~~~~DIliPaA~~--~~It~~na~~l~akiIvegAN~p~t~ea~~iL 342 (428)
..+++.+... +.| . .....+ .++.+ .+|||++-|+.. .++..+-.. =.+-++.=|+..|-..|.+..+
T Consensus 156 -~a~~la~~l~~~~g----~-~~~~~~-~~eav-~~aDIVi~aT~s~~pvl~~~~l~-~G~~V~~vGs~~p~~~El~~~~ 226 (313)
T 3hdj_A 156 -ASPEILERIGRRCG----V-PARMAA-PADIA-AQADIVVTATRSTTPLFAGQALR-AGAFVGAIGSSLPHTRELDDEA 226 (313)
T ss_dssp -CCHHHHHHHHHHHT----S-CEEECC-HHHHH-HHCSEEEECCCCSSCSSCGGGCC-TTCEEEECCCSSTTCCCCCHHH
T ss_pred -HHHHHHHHHHHhcC----C-eEEEeC-HHHHH-hhCCEEEEccCCCCcccCHHHcC-CCcEEEECCCCCCchhhcCHHH
Confidence 2344433322 222 1 112222 34443 479999998863 233322111 1456677788888655554444
Q ss_pred HHCCCceeccccc
Q psy8194 343 RDKGIILAPDVIT 355 (428)
Q Consensus 343 ~~rGI~viPD~la 355 (428)
..|+-.++-|...
T Consensus 227 ~~~a~~v~vD~~~ 239 (313)
T 3hdj_A 227 LRRARAVVVEWRE 239 (313)
T ss_dssp HHHCSEEEESCHH
T ss_pred HhcCCEEEECCHH
Confidence 4555445556443
No 316
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=90.65 E-value=0.31 Score=45.89 Aligned_cols=35 Identities=23% Similarity=0.398 Sum_probs=30.7
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 40 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVV-ICD 40 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 3578999999997 8999999999999999987 445
No 317
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=90.65 E-value=0.24 Score=46.36 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=30.1
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++++.|.+.|++|+. .|
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~ 38 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVF-GD 38 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-Ee
Confidence 578999999997 89999999999999999874 44
No 318
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.60 E-value=0.13 Score=49.09 Aligned_cols=96 Identities=14% Similarity=0.122 Sum_probs=57.3
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-----C-CEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcC-CCcCCCCc------eecc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-----G-AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR-SIKDFNEG------EKIN 291 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-----G-akvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g-~l~~~~~~------~~i~ 291 (428)
++|.|+|.|++|..+|..|.+. | ..|+ +.|+ .+.+.++.++.| .+...++. ...+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r-----------~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 76 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVS-WIAR-----------GAHLEAIRAAGGLRVVTPSRDFLARPTCVTD 76 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEE-EECC-----------HHHHHHHHHHTSEEEECSSCEEEECCSEEES
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEE-EEEc-----------HHHHHHHHhcCCeEEEeCCCCeEEecceEec
Confidence 5899999999999999999998 8 7775 5552 234444444123 11111111 1112
Q ss_pred CCCcccccCceEEeccccccccccccccc----cc-ceEEEecCCCCCC
Q psy8194 292 DSKEFWSIPCDILIPAAIEDQITINNANN----VT-AKIILEGANGPTT 335 (428)
Q Consensus 292 ~~~~il~~~~DIliPaA~~~~It~~na~~----l~-akiIvegAN~p~t 335 (428)
+.+. ..+||++|-|.....+ .+.+.. ++ -++|+.-.|+.-+
T Consensus 77 -~~~~-~~~~D~vil~vk~~~~-~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 77 -NPAE-VGTVDYILFCTKDYDM-ERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp -CHHH-HCCEEEEEECCSSSCH-HHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred -Cccc-cCCCCEEEEecCcccH-HHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 2222 2479999998876554 333332 32 3578888888644
No 319
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=90.58 E-value=0.25 Score=45.87 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=30.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~ 37 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVA-FSD 37 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999998 8999999999999999986 555
No 320
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=90.56 E-value=0.26 Score=49.87 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=66.2
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCC---EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCcee--c--cCC---C
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGA---KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEK--I--NDS---K 294 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~Ga---kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~--i--~~~---~ 294 (428)
++|+|.|.|.+|+.+++.|.+.|. +| .++| -+.+++.+..++.+...+ +.... . ++. +
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V-~v~~----------r~~~~~~~la~~l~~~~~-~~~~~~~~D~~d~~~l~ 69 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHI-TLAS----------RTLSKCQEIAQSIKAKGY-GEIDITTVDADSIEELV 69 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEE-EEEE----------SCHHHHHHHHHHHHHTTC-CCCEEEECCTTCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEE-EEEE----------CCHHHHHHHHHHhhhhcC-CceEEEEecCCCHHHHH
Confidence 489999999999999999999884 55 6888 456666665543211000 01111 1 111 1
Q ss_pred cccc-cCceEEecccccccccccccc---cccceEEEecCCC--CC-C-------HHHHHHHHHCCCceecccccc
Q psy8194 295 EFWS-IPCDILIPAAIEDQITINNAN---NVTAKIILEGANG--PT-T-------TEADDILRDKGIILAPDVITN 356 (428)
Q Consensus 295 ~il~-~~~DIliPaA~~~~It~~na~---~l~akiIvegAN~--p~-t-------~ea~~iL~~rGI~viPD~laN 356 (428)
+++. .++|++|-|+.... +...+. +-++.+| .-++. |. + .+..+..+++|+.+++..=..
T Consensus 70 ~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vv-D~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~ 143 (405)
T 4ina_A 70 ALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYL-DTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFD 143 (405)
T ss_dssp HHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEE-ESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTT
T ss_pred HHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEE-EecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCC
Confidence 2332 25899999986432 211111 1144444 23332 21 1 144567788899888766443
No 321
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=90.47 E-value=0.19 Score=47.66 Aligned_cols=47 Identities=17% Similarity=0.146 Sum_probs=34.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFT 278 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~ 278 (428)
++++++++|.|. |-+|+.+|+.|.+.|++|+ +.| .+.+.+.+..++.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~~~ 72 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVA-LAG----------RRLDALQETAAEI 72 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHHh
Confidence 468899999997 8899999999999999986 555 3556666665543
No 322
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.36 E-value=0.55 Score=45.10 Aligned_cols=52 Identities=19% Similarity=0.237 Sum_probs=40.3
Q ss_pred HhCCCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcC
Q psy8194 217 KINLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR 279 (428)
Q Consensus 217 ~~g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g 279 (428)
.+-..|+||+++|.|. +-+|+.+|+.|.+.|++|+ ++| .+.+++.+..++.+
T Consensus 22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~-i~~----------r~~~~l~~~~~~~g 74 (273)
T 4fgs_A 22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVF-ITG----------RRKDVLDAAIAEIG 74 (273)
T ss_dssp ---CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHHC
T ss_pred hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHHcC
Confidence 3444699999999998 6799999999999999985 777 46677777666543
No 323
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=90.33 E-value=0.94 Score=38.88 Aligned_cols=113 Identities=15% Similarity=0.134 Sum_probs=62.8
Q ss_pred CCceEEEEec----cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 223 INSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 223 ~g~~vaIqGf----GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+-++|+|+|. |+.|+.+++.|.+.|.+|..|. |+ + ....+. +...+++.+++-
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vn--------p~-----~------~~~~i~---G~~~~~sl~el~- 68 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVN--------PR-----F------QGEELF---GEEAVASLLDLK- 68 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEEC--------GG-----G------TTSEET---TEECBSSGGGCC-
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeC--------CC-----c------ccCcCC---CEEecCCHHHCC-
Confidence 3578999999 8999999999999999854332 22 0 001111 122222122322
Q ss_pred cCceEEecccc----cccccccccccccceEEEecCCCCCCHHHHHHHHHCCCceeccccccccchhhhH
Q psy8194 299 IPCDILIPAAI----EDQITINNANNVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSY 364 (428)
Q Consensus 299 ~~~DIliPaA~----~~~It~~na~~l~akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGGVi~s~ 364 (428)
.++|+.+-|.. ..++.+--...+++ +++- +. ..+.++.++.+++|+.++ --|+-|++...
T Consensus 69 ~~vDlavi~vp~~~~~~v~~~~~~~gi~~-i~~~-~g-~~~~~~~~~a~~~Gir~v---gpnc~g~~~~~ 132 (140)
T 1iuk_A 69 EPVDILDVFRPPSALMDHLPEVLALRPGL-VWLQ-SG-IRHPEFEKALKEAGIPVV---ADRCLMVEHKR 132 (140)
T ss_dssp SCCSEEEECSCHHHHTTTHHHHHHHCCSC-EEEC-TT-CCCHHHHHHHHHTTCCEE---ESCCHHHHHHH
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHHcCCCE-EEEc-CC-cCHHHHHHHHHHcCCEEE---cCCccceEChh
Confidence 24565554443 33332211112232 3332 21 136888899999999885 34777776654
No 324
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=90.27 E-value=0.81 Score=47.36 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=28.2
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
++|+|+|.|.+|..+|..|.+.|..|+ +.|.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~-l~D~ 85 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETF-LVVR 85 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEE-EEEC
Confidence 689999999999999999999999985 7783
No 325
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=90.10 E-value=0.24 Score=49.24 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=27.9
Q ss_pred ceEEEEe-ccHHHHHHHHHHHHCC-CEEEEEEcC
Q psy8194 225 SKISIQG-FGNVGSVAANLFFKAG-AKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqG-fGnVG~~~a~~L~~~G-akvVaVsD~ 256 (428)
+||+|.| +|.+|+.+++.|.+.. ..++++++.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~ 38 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR 38 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence 6899999 8999999999998764 588888874
No 326
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.10 E-value=0.25 Score=49.07 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=27.2
Q ss_pred ceEEEEeccHHHHHHHHHHHHCC-------CEEEEEEcCC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAG-------AKIVAIQDDK 257 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~G-------akvVaVsD~~ 257 (428)
++|+|+|.|++|+.+|..|.+.| ..|+ +.|.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~-~~~r~ 60 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVR-MWIRD 60 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEE-EECCS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEE-EEECC
Confidence 47999999999999999999988 7774 66643
No 327
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.06 E-value=0.38 Score=47.94 Aligned_cols=36 Identities=22% Similarity=0.464 Sum_probs=31.5
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
+++.+|+|.|.|.+|+.+|+.|...|..-+.|.|.+
T Consensus 116 L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 116 LKNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 578899999999999999999999997666788853
No 328
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=89.93 E-value=0.13 Score=50.26 Aligned_cols=111 Identities=17% Similarity=0.119 Sum_probs=64.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cCceE
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCDI 303 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~~DI 303 (428)
.||+|+|+|.+|...++.| ..+++|++|+|.+ ++ -..+++.+..++.+- +...++|.+++++ .++|+
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~-----~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~~vD~ 70 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGV-----PE-EDLSKLEKAISEMNI-----KPKKYNNWWEMLEKEKPDI 70 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSS-----TT-CCCHHHHHHHHTTTC-----CCEECSSHHHHHHHHCCSE
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCC-----ch-hhHHHHHHHHHHcCC-----CCcccCCHHHHhcCCCCCE
Confidence 6899999999998777777 6789999999953 10 012344444433331 1233443567775 57899
Q ss_pred Eecccccccccccccccc---cceEEEecCCCCCCHHHHHH---HHHCCCc
Q psy8194 304 LIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGII 348 (428)
Q Consensus 304 liPaA~~~~It~~na~~l---~akiIvegAN~p~t~ea~~i---L~~rGI~ 348 (428)
++-|+. +..+.+.+... ...++||=.=.....|++++ .+++|+.
T Consensus 71 V~I~tp-~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 71 LVINTV-FSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp EEECSS-HHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred EEEeCC-cchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 888764 33333333222 44677875221122355443 4556765
No 329
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.86 E-value=0.3 Score=45.73 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=30.4
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
++++|+|.|.|-+|+++++.|.+.|.+|++++..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4679999999999999999999999999877653
No 330
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=89.66 E-value=0.56 Score=46.79 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=29.7
Q ss_pred CCceEEEEe-ccHHHHHHHHHHHHCC-CEEEEEEcC
Q psy8194 223 INSKISIQG-FGNVGSVAANLFFKAG-AKIVAIQDD 256 (428)
Q Consensus 223 ~g~~vaIqG-fGnVG~~~a~~L~~~G-akvVaVsD~ 256 (428)
+..||+|.| +|.+|+.+++.|.+.. ..+++|.|.
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~ 50 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD 50 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 457999999 9999999999998865 589999885
No 331
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=89.64 E-value=2.4 Score=42.04 Aligned_cols=43 Identities=26% Similarity=0.485 Sum_probs=33.7
Q ss_pred ceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYV 275 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~ 275 (428)
.||.|-|||.+|+.+.|.+.+. ...||+|-|.. .|++.+.-+.
T Consensus 4 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~--------~d~~~~a~l~ 47 (337)
T 3v1y_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPF--------ITTDYMTYMF 47 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTT--------SCHHHHHHHH
T ss_pred eEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCC--------CCHHHHHHHh
Confidence 5899999999999999988776 47899999842 3776654333
No 332
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=89.64 E-value=0.27 Score=46.50 Aligned_cols=36 Identities=22% Similarity=0.178 Sum_probs=31.3
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
.+++|++++|.|. |.+|+.+|+.|.+.|++|+. .|.
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~-~~~ 43 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIA-VDI 43 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EEC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEE-Eec
Confidence 4689999999998 78999999999999999974 443
No 333
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.57 E-value=0.79 Score=44.32 Aligned_cols=32 Identities=34% Similarity=0.515 Sum_probs=29.4
Q ss_pred CCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 223 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.|.+|+|+|. |.+|..+++++...|++|+++.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 181 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIA 181 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 7889999999 9999999999999999998654
No 334
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.45 E-value=1.5 Score=42.67 Aligned_cols=33 Identities=27% Similarity=0.216 Sum_probs=29.2
Q ss_pred CceEEEEeccHHHHH-HHHHHHHCCCEEEEEEcCC
Q psy8194 224 NSKISIQGFGNVGSV-AANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 224 g~~vaIqGfGnVG~~-~a~~L~~~GakvVaVsD~~ 257 (428)
.++|.++|.|..|.. +|++|.++|++| .++|.+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V-~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEV-SGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEE-EEEESS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEE-EEEcCC
Confidence 468999999999995 899999999998 589964
No 335
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.20 E-value=0.19 Score=47.44 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=31.0
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
+++++|+|.|.|.+|+.+|+.|.+.|..-+.|.|.+
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 467899999999999999999999998445688864
No 336
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.19 E-value=0.37 Score=45.63 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=30.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+++|++++|.|. |.+|+++|+.|.+.|++|+ +.|.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r 64 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVA-VAAR 64 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 689999999997 8999999999999999987 4443
No 337
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.15 E-value=0.39 Score=49.43 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=31.6
Q ss_pred CCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 254 (428)
++++|++|+|.|.|.||...+++|.+.|++|+-|+
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~ 42 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNA 42 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEE
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEc
Confidence 36899999999999999999999999999987444
No 338
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.11 E-value=1.2 Score=43.20 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=43.9
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCC-CCceeccCCCcccccCc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-NEGEKINDSKEFWSIPC 301 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~-~~~~~i~~~~~il~~~~ 301 (428)
++|+|+|.|.||+.+|..|...|. .| .+.| +|.+++............+ +..+...+..+-+ .+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV-~L~D----------~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~-~~a 68 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSEL-VLVD----------RDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSEL-ADA 68 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEE-EEEC----------SSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGG-TTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEE-EEEe----------CCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHh-CCC
Confidence 479999999999999999999997 66 4777 5655554322211111111 1222211122222 489
Q ss_pred eEEecccc
Q psy8194 302 DILIPAAI 309 (428)
Q Consensus 302 DIliPaA~ 309 (428)
|++|-|+.
T Consensus 69 DvVIi~~~ 76 (304)
T 2v6b_A 69 QVVILTAG 76 (304)
T ss_dssp SEEEECC-
T ss_pred CEEEEcCC
Confidence 99999984
No 339
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=89.08 E-value=0.35 Score=44.77 Aligned_cols=43 Identities=19% Similarity=0.308 Sum_probs=33.9
Q ss_pred CceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 224 NSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 224 g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
+++++|.|. |-+|+++|+.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 45 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVC-FID----------IDEKRSADFAKE 45 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHh
Confidence 678999997 8899999999999999986 555 355566655544
No 340
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.05 E-value=0.59 Score=44.57 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=30.6
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~-~~~ 80 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVA-INY 80 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 579999999998 8999999999999999986 555
No 341
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=88.92 E-value=0.68 Score=44.43 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=61.6
Q ss_pred CCceEEEEeccHHHHHHHHHHHH----CCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFK----AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 298 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~----~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~ 298 (428)
+-.||+|+|+|.+|+..++.|.+ .+.++++|+|.+- + .++. +.. ..+.+++++
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-------~--------a~~~-------g~~-~~~~~ell~ 62 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-------L--------GSLD-------EVR-QISLEDALR 62 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-------C--------CEET-------TEE-BCCHHHHHH
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-------H--------HHHc-------CCC-CCCHHHHhc
Confidence 45799999999999988887754 5789999999631 0 0111 111 122456664
Q ss_pred -cCceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHHCCCcee
Q psy8194 299 -IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILA 350 (428)
Q Consensus 299 -~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~---iL~~rGI~vi 350 (428)
.++|+++-|+. +..+.+.+... ...++|| -|+ | .++++ ..+++|+.+.
T Consensus 63 ~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~E---KPla~~~~ea~~l~~~a~~~g~~~~ 120 (294)
T 1lc0_A 63 SQEIDVAYICSE-SSSHEDYIRQFLQAGKHVLVE---YPMTLSFAAAQELWELAAQKGRVLH 120 (294)
T ss_dssp CSSEEEEEECSC-GGGHHHHHHHHHHTTCEEEEE---SCSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEeCC-cHhHHHHHHHHHHCCCcEEEe---CCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 47898888875 34444444332 3357887 364 3 34443 3456777654
No 342
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=88.91 E-value=0.19 Score=47.20 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=28.7
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |-+|+++|+.|.+.|++|+.+.
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 357889999997 8999999999999999997554
No 343
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=88.84 E-value=0.87 Score=41.84 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=31.1
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~-~~~ 40 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVV-VAD 40 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEc
Confidence 4678999999998 8999999999999999987 455
No 344
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=88.83 E-value=1.7 Score=42.91 Aligned_cols=39 Identities=23% Similarity=0.368 Sum_probs=31.3
Q ss_pred HHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEc
Q psy8194 215 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 255 (428)
Q Consensus 215 ~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD 255 (428)
++..+.. .|.+|+|+|.|.||..+++++...|+ +|+ ++|
T Consensus 175 l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi-~~~ 214 (370)
T 4ej6_A 175 VDLSGIK-AGSTVAILGGGVIGLLTVQLARLAGATTVI-LST 214 (370)
T ss_dssp HHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTTCSEEE-EEC
T ss_pred HHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEE-EEC
Confidence 3444443 68899999999999999999999999 665 555
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.82 E-value=0.99 Score=43.96 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=28.6
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC-EEEEE
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA-KIVAI 253 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaV 253 (428)
.|.+|+|.|.|.||..+++++...|+ +|+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~ 198 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVS 198 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 88999999999999999999999999 88754
No 346
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=88.69 E-value=1.1 Score=48.95 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=27.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
++|+|+|.|.+|+.+|..|.+.|..|+ +.|
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~-l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVI-LKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEE-EEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEE-EEE
Confidence 579999999999999999999999885 777
No 347
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.68 E-value=1.1 Score=44.19 Aligned_cols=42 Identities=26% Similarity=0.374 Sum_probs=34.1
Q ss_pred HHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 214 IASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 214 ~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++..+....|.+|+|+|.|.||..+++++...|++|+++..
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~ 219 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST 219 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 344455444789999999999999999999999999876553
No 348
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.62 E-value=0.76 Score=45.30 Aligned_cols=74 Identities=22% Similarity=0.107 Sum_probs=45.7
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHH--hcCCCcCC-CCceeccCCCccc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVT--FTRSIKDF-NEGEKINDSKEFW 297 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~--~~g~l~~~-~~~~~i~~~~~il 297 (428)
..++|+|+|.|+||+.+|..|...|. .| .+.| +|.+++..... +.+ ..-+ ...+..+++.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l-~l~D----------~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a- 70 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDEL-VVID----------VNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYED- 70 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEE-EEEC----------SCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGG-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceE-EEEe----------cchHHHHHHHHHHHhc-cccccCCeEEEeCcHHH-
Confidence 35789999999999999999988885 55 4777 66666554221 111 1111 122222212222
Q ss_pred ccCceEEecccc
Q psy8194 298 SIPCDILIPAAI 309 (428)
Q Consensus 298 ~~~~DIliPaA~ 309 (428)
-.+|||+|-|+.
T Consensus 71 ~~~aDvVvi~ag 82 (326)
T 3pqe_A 71 CKDADIVCICAG 82 (326)
T ss_dssp GTTCSEEEECCS
T ss_pred hCCCCEEEEecc
Confidence 248999888874
No 349
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=88.51 E-value=1.8 Score=39.20 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=30.9
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVT 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 3678999999998 9999999999999999987543
No 350
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=88.51 E-value=0.86 Score=42.88 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=30.8
Q ss_pred CCCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 219 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 219 g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
..++++++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 42 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVM-IVG 42 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 34689999999997 8999999999999999986 555
No 351
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=88.50 E-value=0.39 Score=49.13 Aligned_cols=36 Identities=33% Similarity=0.528 Sum_probs=32.8
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
++++++|.|.|.|..|..+|++|.++|++| .++|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V-~~~D~~ 41 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIV-TVNDGK 41 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEE-EEEESS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEE-EEEeCC
Confidence 578999999999999999999999999998 588864
No 352
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.45 E-value=0.61 Score=43.34 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=30.1
Q ss_pred CCCCceEEEEec-c-HHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-G-NVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-G-nVG~~~a~~L~~~GakvVaVsD 255 (428)
.+++++++|.|. | .+|+++|+.|.+.|++|+ +.|
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~-~~~ 54 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVV-ISD 54 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEE-Eec
Confidence 478999999998 8 599999999999999987 445
No 353
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=88.45 E-value=2.4 Score=41.18 Aligned_cols=32 Identities=25% Similarity=0.415 Sum_probs=28.8
Q ss_pred CCceEEEE-eccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 223 INSKISIQ-GFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIq-GfGnVG~~~a~~L~~~GakvVaVs 254 (428)
.|.+|+|+ |.|.||..+++++...|++|++++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~ 182 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTA 182 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 68999999 689999999999999999998554
No 354
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=88.38 E-value=1 Score=41.74 Aligned_cols=35 Identities=31% Similarity=0.370 Sum_probs=30.8
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |.+|+++++.|.+.|++|+. .|
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~ 38 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVL-VA 38 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-Ec
Confidence 4678999999997 89999999999999999874 44
No 355
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=88.33 E-value=1.1 Score=43.44 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=62.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcC-C-CCc-----eeccCCCccc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD-F-NEG-----EKINDSKEFW 297 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~-~-~~~-----~~i~~~~~il 297 (428)
++|+|+|.|++|..+|..|.+.|..|. +.+++ +.+++. ++.-.+.+ + ++. ...++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~-~~~r~---------~~~~i~---~~Gl~~~~~~~g~~~~~~~~~~~~~~~~- 68 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVS-VVSRS---------DYETVK---AKGIRIRSATLGDYTFRPAAVVRSAAEL- 68 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEE-EECST---------THHHHH---HHCEEEEETTTCCEEECCSCEESCGGGC-
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEE-EEeCC---------hHHHHH---hCCcEEeecCCCcEEEeeeeeECCHHHc-
Confidence 689999999999999999999999885 44432 122322 22111222 1 111 112212232
Q ss_pred ccCceEEecccccccccccccccc----c-ceEEEecCCCCCC-HHHHHHHHHCCCc
Q psy8194 298 SIPCDILIPAAIEDQITINNANNV----T-AKIILEGANGPTT-TEADDILRDKGII 348 (428)
Q Consensus 298 ~~~~DIliPaA~~~~It~~na~~l----~-akiIvegAN~p~t-~ea~~iL~~rGI~ 348 (428)
..++|+++-|.-...+. +.++.+ + -.+|+-..|+--. ....+.|-+..|+
T Consensus 69 ~~~~DlVilavK~~~~~-~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 69 ETKPDCTLLCIKVVEGA-DRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp SSCCSEEEECCCCCTTC-CHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCEE
T ss_pred CCCCCEEEEecCCCChH-HHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcEE
Confidence 24799999988655543 333333 2 2478888888653 3344555444343
No 356
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=88.25 E-value=0.6 Score=50.83 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=28.4
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
.=++|+|+|.|++|+.+|..|.+.|..|+ +.|
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~-l~D 344 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPIL-MKD 344 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEE-EEC
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEE-EEE
Confidence 34579999999999999999999999885 777
No 357
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=88.22 E-value=0.61 Score=44.11 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=30.8
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+++|++++|.|. |.+|+.+|+.|.+.|++|+ +.|.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~r 65 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVI-LHGV 65 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 689999999997 8999999999999999987 4553
No 358
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=88.18 E-value=0.4 Score=48.12 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=63.6
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC--CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 300 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~--GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~ 300 (428)
.-.||+|+|.| .|+.-++.+.+. ++++|||+| .|.++..++.++.| ...++|.+++++ +
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~----------~~~~~a~~~a~~~g-------v~~~~~~~~l~~-~ 66 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLA----------QGSARSRELAHAFG-------IPLYTSPEQITG-M 66 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEEC----------CSSHHHHHHHHHTT-------CCEESSGGGCCS-C
T ss_pred CCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEEC----------CCHHHHHHHHHHhC-------CCEECCHHHHhc-C
Confidence 45799999999 698877777664 689999999 56677778777764 223343566664 6
Q ss_pred ceEEeccccccccc----ccccccc---cceEEEecCCCCCCH-HHHHH---HHHCCCcee
Q psy8194 301 CDILIPAAIEDQIT----INNANNV---TAKIILEGANGPTTT-EADDI---LRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~~It----~~na~~l---~akiIvegAN~p~t~-ea~~i---L~~rGI~vi 350 (428)
+|+.+=|+... .+ .+-+... +.-++||= |+|. |++++ -+++|+.+.
T Consensus 67 ~D~v~i~~p~~-~h~~~~~~~a~~al~aGkhVl~EK---Pl~~~ea~~l~~~A~~~g~~~~ 123 (372)
T 4gmf_A 67 PDIACIVVRST-VAGGAGTQLARHFLARGVHVIQEH---PLHPDDISSLQTLAQEQGCCYW 123 (372)
T ss_dssp CSEEEECCC---CTTSHHHHHHHHHHHTTCEEEEES---CCCHHHHHHHHHHHHHHTCCEE
T ss_pred CCEEEEECCCc-ccchhHHHHHHHHHHcCCcEEEec---CCCHHHHHHHHHHHHHcCCEEE
Confidence 77766555322 22 1222221 44577774 4553 44433 345666553
No 359
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.05 E-value=1.2 Score=43.56 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=28.6
Q ss_pred CC--ceEEEEec-cHHHHHHHHHHHHCCC-EEEEEE
Q psy8194 223 IN--SKISIQGF-GNVGSVAANLFFKAGA-KIVAIQ 254 (428)
Q Consensus 223 ~g--~~vaIqGf-GnVG~~~a~~L~~~Ga-kvVaVs 254 (428)
.| .+|+|.|. |.+|..+++++...|+ +|+++.
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~ 193 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGIC 193 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 57 89999998 9999999999999999 887544
No 360
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=88.03 E-value=0.24 Score=45.93 Aligned_cols=48 Identities=23% Similarity=0.340 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEeccHHHHHHHHH--HHHCCCEEEEEEcC
Q psy8194 207 VFIIGSKIASKINLNIINSKISIQGFGNVGSVAANL--FFKAGAKIVAIQDD 256 (428)
Q Consensus 207 v~~~~~~~~~~~g~~l~g~~vaIqGfGnVG~~~a~~--L~~~GakvVaVsD~ 256 (428)
|..-.+..-+.+|.+ +..+|+|.|.|++|+.+++. ... |.++|++.|.
T Consensus 64 v~~L~~~~~~~lg~~-~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~ 113 (211)
T 2dt5_A 64 VPVLKRELRHILGLN-RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV 113 (211)
T ss_dssp HHHHHHHHHHHHTTT-SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES
T ss_pred hHHHHHHHHHHhCcC-CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC
Confidence 433334443445654 45799999999999999985 334 8999999993
No 361
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=88.01 E-value=0.46 Score=44.46 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=27.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 253 (428)
++++++++|.|. |-+|+++|+.|.+.|++|+.+
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVH 41 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 467899999987 899999999999999998744
No 362
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.92 E-value=0.34 Score=47.21 Aligned_cols=103 Identities=14% Similarity=0.104 Sum_probs=60.8
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCccc----cc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW----SI 299 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il----~~ 299 (428)
..+++|.|+|.+|+.+++.|.+.|. |+ +.| -|.+.+. ..+ .+. .-+. +.. + ..+.| -.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~-vid----------~~~~~~~-~~~-~~~-~~i~-gd~-~-~~~~L~~a~i~ 176 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FV-LAE----------DENVRKK-VLR-SGA-NFVH-GDP-T-RVSDLEKANVR 176 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EE-EES----------CGGGHHH-HHH-TTC-EEEE-SCT-T-SHHHHHHTCST
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EE-EEe----------CChhhhh-HHh-CCc-EEEE-eCC-C-CHHHHHhcChh
Confidence 4579999999999999999999998 65 557 3555554 333 211 0000 011 1 12222 23
Q ss_pred CceEEecccccc---cccccccccc--cceEEEecCCCCCCHHHHHHHHHCCCc
Q psy8194 300 PCDILIPAAIED---QITINNANNV--TAKIILEGANGPTTTEADDILRDKGII 348 (428)
Q Consensus 300 ~~DIliPaA~~~---~It~~na~~l--~akiIvegAN~p~t~ea~~iL~~rGI~ 348 (428)
+||.++-+...+ ......+.++ +.++|+..-| ++..+.|++.|+-
T Consensus 177 ~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~iiar~~~----~~~~~~l~~~G~d 226 (336)
T 1lnq_A 177 GARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER----YENIEQLRMAGAD 226 (336)
T ss_dssp TEEEEEECCSSHHHHHHHHHHHHTTCTTSEEEEECSS----GGGHHHHHHTTCS
T ss_pred hccEEEEcCCccHHHHHHHHHHHHHCCCCeEEEEECC----HHHHHHHHHcCCC
Confidence 789988877533 2233344454 3477876633 3445677888874
No 363
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=87.81 E-value=1.1 Score=41.52 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=30.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.+++++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 43 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVI-LLG 43 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 478999999998 8899999999999999986 555
No 364
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=87.76 E-value=0.98 Score=45.45 Aligned_cols=119 Identities=20% Similarity=0.138 Sum_probs=66.7
Q ss_pred ceEEEEec-cHHHHHHHHHHHHC-CCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCC----cCCCCce-e----ccCC
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSI----KDFNEGE-K----INDS 293 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~-GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l----~~~~~~~-~----i~~~ 293 (428)
++|+|.|+ |.+|...++.+.+. +++|++++- |-+++.|.+..++.+.- .+-.... . +...
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a---------~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~ 74 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISF---------HSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGS 74 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEE---------SSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEEST
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEc---------cCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCH
Confidence 78999996 99999999999886 689999943 26888888887765420 0000000 0 0000
Q ss_pred ---Ccccc-cCceEEecccccccccccccccccceEEEecCCCCCCHHHH----HHHHHCCCceecc
Q psy8194 294 ---KEFWS-IPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEAD----DILRDKGIILAPD 352 (428)
Q Consensus 294 ---~~il~-~~~DIliPaA~~~~It~~na~~l~akiIvegAN~p~t~ea~----~iL~~rGI~viPD 352 (428)
.++++ .++|+++-|..+..=-.-....+++.--+--||--+...+. +..+++|+.++|-
T Consensus 75 ~~l~el~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g~~llPV 141 (376)
T 3a06_A 75 HSIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELIPV 141 (376)
T ss_dssp THHHHHHHHHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHCCEEEEC
T ss_pred HHHHHHhcCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcCCEEEEE
Confidence 12333 35899998865433222222333333333345654333332 2334557777664
No 365
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=87.75 E-value=1 Score=44.47 Aligned_cols=110 Identities=14% Similarity=0.114 Sum_probs=66.7
Q ss_pred CCCceEEEEe-ccHHHHH-HH----HHHHHCC-CEEE---------EEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCC
Q psy8194 222 IINSKISIQG-FGNVGSV-AA----NLFFKAG-AKIV---------AIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN 285 (428)
Q Consensus 222 l~g~~vaIqG-fGnVG~~-~a----~~L~~~G-akvV---------aVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~ 285 (428)
.+..||+|+| +|.+|+. .+ +.+.+.+ ..++ +|+| .|.++..+..++.+.-
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~----------~~~~~a~~~a~~~~~~---- 69 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVG----------RSAEKVEALAKRFNIA---- 69 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEEC----------SSSHHHHHHHHHTTCC----
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEc----------CCHHHHHHHHHHhCCC----
Confidence 4557899999 9999996 55 5565543 2222 5888 5777777777665421
Q ss_pred CceeccCCCcccc-cCceEEecccccccccccccccc---cceEEEecCCCCC--C-HHHHH---HHHHCCCceec
Q psy8194 286 EGEKINDSKEFWS-IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILAP 351 (428)
Q Consensus 286 ~~~~i~~~~~il~-~~~DIliPaA~~~~It~~na~~l---~akiIvegAN~p~--t-~ea~~---iL~~rGI~viP 351 (428)
..++|.+++++ .++|+++-|+.. ..+.+.+... ...+++| -|+ | .++.+ ..+++|+.+..
T Consensus 70 --~~~~~~~~ll~~~~iD~V~i~tp~-~~h~~~~~~al~~Gk~V~~E---KP~a~~~~~~~~l~~~a~~~~~~~~v 139 (383)
T 3oqb_A 70 --RWTTDLDAALADKNDTMFFDAATT-QARPGLLTQAINAGKHVYCE---KPIATNFEEALEVVKLANSKGVKHGT 139 (383)
T ss_dssp --CEESCHHHHHHCSSCCEEEECSCS-SSSHHHHHHHHTTTCEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred --cccCCHHHHhcCCCCCEEEECCCc-hHHHHHHHHHHHCCCeEEEc---CCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 22343567774 468999977653 4444443332 3456666 454 3 34544 34567876543
No 366
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=87.68 E-value=0.56 Score=45.62 Aligned_cols=32 Identities=28% Similarity=0.361 Sum_probs=28.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
++|+|+|.|.+|..+|..|.+.|.+|+ |.|..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~-v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVT-IYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEE-EEecC
Confidence 689999999999999999999999985 77753
No 367
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=87.62 E-value=0.87 Score=42.69 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=37.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+ ++| .+.+.+.+..++
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi-~~~----------r~~~~~~~~~~~ 73 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVV-IAD----------LAAEKGKALADE 73 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEe----------CChHHHHHHHHH
Confidence 578999999998 8999999999999999987 555 355666665554
No 368
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.61 E-value=0.73 Score=40.32 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=29.0
Q ss_pred CCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 223 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 223 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++|+|.|. |.+|+++++.|.+.|.+|++++-
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 3478999998 99999999999999999986654
No 369
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=87.52 E-value=0.62 Score=42.25 Aligned_cols=32 Identities=19% Similarity=0.401 Sum_probs=27.6
Q ss_pred CCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 223 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.+++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 36 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMA 36 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 5678999987 8999999999999999987443
No 370
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.50 E-value=0.37 Score=45.55 Aligned_cols=36 Identities=31% Similarity=0.561 Sum_probs=32.0
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
|++.+|+|.|.|.+|+.+++.|...|..-+.|.|.+
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 577899999999999999999999998666788854
No 371
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=87.49 E-value=2.4 Score=41.16 Aligned_cols=31 Identities=35% Similarity=0.503 Sum_probs=29.2
Q ss_pred CCceEEEEe-ccHHHHHHHHHHHHCCCEEEEE
Q psy8194 223 INSKISIQG-FGNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 223 ~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaV 253 (428)
.|.+|+|+| .|.||..+++++...|++|+++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~ 181 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT 181 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence 688999999 7999999999999999999877
No 372
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.45 E-value=1.3 Score=44.06 Aligned_cols=32 Identities=31% Similarity=0.268 Sum_probs=28.6
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC-EEEEEE
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVs 254 (428)
.|.+|+|+|.|.||..+++++...|+ +|+++.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 217 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGD 217 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence 68899999999999999999998999 887554
No 373
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.41 E-value=1.4 Score=43.67 Aligned_cols=32 Identities=31% Similarity=0.346 Sum_probs=28.0
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 255 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD 255 (428)
.|.+|+|.|.|.||..+++++...|+ +|++ +|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~-~~ 217 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIV-GD 217 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEE-EE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEE-Ec
Confidence 68899999999999999999999999 5654 44
No 374
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=87.33 E-value=1.8 Score=40.96 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=32.2
Q ss_pred CCCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 219 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 219 g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
.++|+||+++|.|. +.+|+.+|+.|.+.|++|+ +.|.
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv-~~~r 39 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPV-VFAR 39 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEEC
Confidence 46799999999998 7799999999999999997 5553
No 375
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=87.23 E-value=0.81 Score=44.44 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=59.6
Q ss_pred CCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
...+++|||+ |+.|+.+++.|.+.|.++|+-.+.+.. |- .+. +...+++.+++.+ .+
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~-----g~-------------~i~---G~~vy~sl~el~~~~~ 70 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKG-----GS-------------EVH---GVPVYDSVKEALAEHP 70 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----TC-------------EET---TEEEESSHHHHHHHCT
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCC-----Cc-------------eEC---CEeeeCCHHHHhhcCC
Confidence 3567888999 999999999999999997655443200 10 011 2223332344444 23
Q ss_pred -ceEEecccccccccccccc---cccce-EEEecCCCCCC--HHHHHHHHHCCCcee
Q psy8194 301 -CDILIPAAIEDQITINNAN---NVTAK-IILEGANGPTT--TEADDILRDKGIILA 350 (428)
Q Consensus 301 -~DIliPaA~~~~It~~na~---~l~ak-iIvegAN~p~t--~ea~~iL~~rGI~vi 350 (428)
+|+.+-+...... .+.+. +.+.| +|+-....+.+ .+..++.++.|+.++
T Consensus 71 ~~DvaIi~vp~~~~-~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 71 EINTSIVFVPAPFA-PDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp TCCEEEECCCGGGH-HHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEecCHHHH-HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 8888866643322 23222 33667 44433333322 245567778899665
No 376
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.21 E-value=1.2 Score=43.42 Aligned_cols=76 Identities=22% Similarity=0.174 Sum_probs=45.7
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHHhc-CCCcCCCCceeccCCCcccccCc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFT-RSIKDFNEGEKINDSKEFWSIPC 301 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~-g~l~~~~~~~~i~~~~~il~~~~ 301 (428)
++|+|+|.|++|+.++..|.+.|. .|+ +.| ++.+.+....... ..+.-.+..+...+..+.+ .+|
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~-l~D----------~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~-~~a 68 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMV-LID----------VDKKRAEGDALDLIHGTPFTRRANIYAGDYADL-KGS 68 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC----------SSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGG-TTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEe----------CChHHHHHHHHHHHhhhhhcCCcEEEeCCHHHh-CCC
Confidence 479999999999999999999887 764 677 5555554433210 0010001122111122222 489
Q ss_pred eEEeccccccc
Q psy8194 302 DILIPAAIEDQ 312 (428)
Q Consensus 302 DIliPaA~~~~ 312 (428)
|++|-|+....
T Consensus 69 DvViiav~~~~ 79 (319)
T 1a5z_A 69 DVVIVAAGVPQ 79 (319)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEEccCCCC
Confidence 99999987543
No 377
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=87.20 E-value=1.2 Score=41.45 Aligned_cols=35 Identities=17% Similarity=0.363 Sum_probs=31.0
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~ 39 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVA-FCA 39 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 3689999999997 8899999999999999986 555
No 378
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=87.02 E-value=1 Score=41.21 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=30.5
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.+++++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~-~~~ 45 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVV-LLG 45 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 478999999998 8999999999999999986 455
No 379
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.02 E-value=1.7 Score=42.91 Aligned_cols=76 Identities=18% Similarity=0.190 Sum_probs=46.2
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCc-eec-cCCCccc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEG-EKI-NDSKEFW 297 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~-~~i-~~~~~il 297 (428)
...++|+|+|.|+||+.+|..|...|. .+ .+.| ++.+++......-.....|+.. ..+ ++..+-
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el-~L~D----------i~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~- 84 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADEL-ALVD----------VIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV- 84 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEE-EEEC----------SCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceE-EEEe----------CChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-
Confidence 467899999999999999999988885 45 4778 5665555432211101112221 222 211121
Q ss_pred ccCceEEecccc
Q psy8194 298 SIPCDILIPAAI 309 (428)
Q Consensus 298 ~~~~DIliPaA~ 309 (428)
-.+|||+|-|+.
T Consensus 85 ~~~aDiVvi~aG 96 (331)
T 4aj2_A 85 TANSKLVIITAG 96 (331)
T ss_dssp GTTEEEEEECCS
T ss_pred hCCCCEEEEccC
Confidence 358999987764
No 380
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=86.98 E-value=1.4 Score=40.91 Aligned_cols=35 Identities=17% Similarity=0.200 Sum_probs=30.6
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |.+|+++++.|.+.|++|+. .|
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~ 38 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLL-FS 38 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-Ee
Confidence 3578999999997 89999999999999999874 45
No 381
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=86.90 E-value=0.99 Score=43.54 Aligned_cols=75 Identities=25% Similarity=0.255 Sum_probs=46.0
Q ss_pred ceEEEEeccHHHHHHHHHHHHCC--CEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCC--Ccee-ccCCCccccc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAG--AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN--EGEK-INDSKEFWSI 299 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~G--akvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~--~~~~-i~~~~~il~~ 299 (428)
++|+|+|.|++|+.+|..|.+.| ..| .+.| .+.+.+.......+....+. ..+. .++. +.+ .
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V-~l~d----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~-~ 68 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDY-VFID----------ANEAKVKADQIDFQDAMANLEAHGNIVINDW-AAL-A 68 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEE-EEEC----------SSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGG-T
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEE-EEEc----------CCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHh-C
Confidence 48999999999999999999988 566 4777 55555554433211000011 1222 1212 222 4
Q ss_pred CceEEeccccccc
Q psy8194 300 PCDILIPAAIEDQ 312 (428)
Q Consensus 300 ~~DIliPaA~~~~ 312 (428)
+||++|-|+....
T Consensus 69 ~aDvViiav~~~~ 81 (309)
T 1hyh_A 69 DADVVISTLGNIK 81 (309)
T ss_dssp TCSEEEECCSCGG
T ss_pred CCCEEEEecCCcc
Confidence 8999999987543
No 382
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=86.85 E-value=0.72 Score=45.47 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=30.6
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
+++|++++|.|. |-+|+.+|+.|.+.|++|+.+.
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~ 76 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAA 76 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEE
Confidence 689999999998 8999999999999999987554
No 383
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.84 E-value=0.98 Score=42.19 Aligned_cols=36 Identities=17% Similarity=0.390 Sum_probs=31.6
Q ss_pred CCCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 219 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 219 g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
..++++++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~ 41 (267)
T 3t4x_A 5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVL-ING 41 (267)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 45789999999997 8899999999999999986 555
No 384
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=86.75 E-value=0.76 Score=41.86 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=31.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+.+.
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 467899999997 899999999999999999866453
No 385
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.65 E-value=1.3 Score=40.58 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=30.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTA 36 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 578999999997 8999999999999999997544
No 386
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=86.63 E-value=0.54 Score=42.75 Aligned_cols=32 Identities=19% Similarity=0.152 Sum_probs=27.7
Q ss_pred CceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 224 NSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 224 g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++++|.|. |.+|+++++.|.+.|++|+.+.+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~ 33 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYG 33 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 367889887 89999999999999999986645
No 387
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.63 E-value=1.3 Score=41.29 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=30.7
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
..+++++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 42 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLV-LAA 42 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEE-EEe
Confidence 3578999999998 7899999999999999987 555
No 388
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.55 E-value=1.8 Score=42.14 Aligned_cols=32 Identities=22% Similarity=0.459 Sum_probs=28.4
Q ss_pred CCceEEEEecc-HHHHHHHHHHHHC-CCEEEEEE
Q psy8194 223 INSKISIQGFG-NVGSVAANLFFKA-GAKIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIqGfG-nVG~~~a~~L~~~-GakvVaVs 254 (428)
.|.+|+|.|.| .+|..+++++... |++|+++.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~ 203 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 203 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEc
Confidence 68899999998 9999999999998 99987443
No 389
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=86.54 E-value=1.4 Score=43.11 Aligned_cols=41 Identities=22% Similarity=0.338 Sum_probs=33.0
Q ss_pred HHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 215 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 215 ~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++.+....|.+|+|+|.|.||..+++++...|++|+++..
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~ 212 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISS 212 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 34444443788999999999999999999999999876553
No 390
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=86.53 E-value=0.98 Score=41.93 Aligned_cols=46 Identities=26% Similarity=0.276 Sum_probs=36.3
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHh
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 277 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~ 277 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+ +.| .+.+++.+..++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 49 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVV-ITG----------RTKEKLEEAKLE 49 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999997 8899999999999999986 555 345555555443
No 391
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=86.49 E-value=1.2 Score=41.56 Aligned_cols=51 Identities=16% Similarity=0.183 Sum_probs=32.7
Q ss_pred HHHHHHHHHHH-HHhCCCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 205 RGVFIIGSKIA-SKINLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 205 ~Gv~~~~~~~~-~~~g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
-|+-.+.+.+. +....++++++++|.|. |.+|+++|+.|.+.|++|+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 9 SGVDLGTENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp ---------------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cccccCcceehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 33434444333 23345789999999997 89999999999999999975554
No 392
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=86.39 E-value=1.1 Score=41.52 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=29.7
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |.+|+.+|+.|.+.|++|+ +.|
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~ 38 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVV-LIA 38 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEE-EEE
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEE
Confidence 3578999999998 8999999999999999987 445
No 393
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=86.34 E-value=0.96 Score=42.60 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=30.8
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~-~~~ 57 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARIL-ING 57 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-ECC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 689999999998 8999999999999999986 566
No 394
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=86.31 E-value=0.67 Score=44.73 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=30.8
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
.++|++++|.|. |.+|+++|+.|.+.|++|+ +.|.
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv-~~~r 59 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVV-VNDI 59 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EECC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEeC
Confidence 578999999997 8999999999999999997 5554
No 395
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=86.27 E-value=1.5 Score=40.73 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=30.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 38 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIA-LLD 38 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999997 8999999999999999986 445
No 396
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=86.14 E-value=3.1 Score=40.11 Aligned_cols=41 Identities=27% Similarity=0.234 Sum_probs=32.9
Q ss_pred HHHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 214 IASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 214 ~~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++..+. ..|.+|+|+|.|.||..+++++...|++++.++|
T Consensus 152 ~~~~~~~-~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~ 192 (346)
T 4a2c_A 152 AFHLAQG-CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAID 192 (346)
T ss_dssp HHHHTTC-CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHhcc-CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEe
Confidence 3333333 4788999999999999999999999998766677
No 397
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.12 E-value=1.1 Score=41.91 Aligned_cols=34 Identities=21% Similarity=0.444 Sum_probs=30.5
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 41 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVA-VAG 41 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 688999999997 8999999999999999987 555
No 398
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=86.12 E-value=0.36 Score=46.94 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=27.8
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcC
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDD 256 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~ 256 (428)
.++|+|+|.|++|+.+|..|.+.|. .| .+.|.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V-~l~D~ 36 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADV-VLFDI 36 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEE-EEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceE-EEEeC
Confidence 4689999999999999999999997 74 57774
No 399
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=86.05 E-value=0.79 Score=42.37 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=28.7
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCC---CEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAG---AKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~G---akvVaVs 254 (428)
++++++++|.|. |.+|+++++.|.+.| ++|+.+.
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~ 55 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTC 55 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEe
Confidence 578899999987 999999999999999 8987554
No 400
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=86.04 E-value=1 Score=42.00 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=31.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+++|++++|.|. |.+|+++|+.|.+.|++|+.+.+.
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 578999999998 789999999999999999866553
No 401
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=86.00 E-value=1.6 Score=40.50 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=30.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+. .|
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~ 40 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYT-CS 40 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-Ee
Confidence 578999999997 89999999999999999874 44
No 402
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.98 E-value=0.67 Score=43.15 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=29.1
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++|+|.|.|.+|+++++.|.+.|.+|++++-
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEc
Confidence 47899999999999999999999999987764
No 403
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=85.97 E-value=1.6 Score=40.23 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=30.1
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+.+|+.|.+.|++|+ +.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~ 38 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVA-IAA 38 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEE
Confidence 478999999997 8999999999999999987 445
No 404
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=85.89 E-value=1.2 Score=41.38 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=30.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~-~~~ 60 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVV-LTA 60 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEE
Confidence 578999999997 8999999999999999987 445
No 405
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.83 E-value=1.2 Score=39.76 Aligned_cols=94 Identities=18% Similarity=0.193 Sum_probs=56.2
Q ss_pred ceEEEEe-ccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccccCceE
Q psy8194 225 SKISIQG-FGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 303 (428)
Q Consensus 225 ~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~~~~DI 303 (428)
++|+|.| .|++|+.+++.|.+.|.+|+ +.|. +.+.+.+..++.+....-..... ++.++.+ .+||+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~-~~~r----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~D~ 67 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIV-VGSR----------REEKAEAKAAEYRRIAGDASITG-MKNEDAA-EACDI 67 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEE-EEES----------SHHHHHHHHHHHHHHHSSCCEEE-EEHHHHH-HHCSE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEE-EEeC----------CHHHHHHHHHHhccccccCCCCh-hhHHHHH-hcCCE
Confidence 4799999 99999999999999999875 5563 44444444332110000000111 1122333 37999
Q ss_pred Eecccccccccccccccc----cceEEEecCCC
Q psy8194 304 LIPAAIEDQITINNANNV----TAKIILEGANG 332 (428)
Q Consensus 304 liPaA~~~~It~~na~~l----~akiIvegAN~ 332 (428)
++-|.....+. +.+..+ +-++|+..+|+
T Consensus 68 Vi~~~~~~~~~-~~~~~l~~~~~~~~vi~~~~g 99 (212)
T 1jay_A 68 AVLTIPWEHAI-DTARDLKNILREKIVVSPLVP 99 (212)
T ss_dssp EEECSCHHHHH-HHHHHTHHHHTTSEEEECCCC
T ss_pred EEEeCChhhHH-HHHHHHHHHcCCCEEEEcCCC
Confidence 99998755432 333222 34688888884
No 406
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=85.83 E-value=1.3 Score=40.67 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=25.6
Q ss_pred CceEEEEec-cHHHHHHHHHHHHCCCEEEEE
Q psy8194 224 NSKISIQGF-GNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 224 g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 253 (428)
+++++|.|. |-+|+++++.|.+.|++|+.+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEe
Confidence 468888887 889999999999999998744
No 407
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=85.81 E-value=0.74 Score=43.69 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=31.1
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+|+||+++|.|. +-+|+.+|+.|.+.|++|+ ++|.
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~-~~~r 43 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVL-TTAR 43 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEE-EEEC
Confidence 789999999998 6799999999999999997 5554
No 408
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=85.81 E-value=1.1 Score=41.86 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=30.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++|++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 51 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLV-LSG 51 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999997 8999999999999999986 555
No 409
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.76 E-value=1.5 Score=41.88 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=30.5
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++|++++|.|. |.+|+++|+.|.+.|++|+ ++|
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~-~~~ 62 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLV-LSD 62 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEE
Confidence 588999999998 8899999999999999987 455
No 410
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.64 E-value=0.88 Score=42.53 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=27.1
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
++|.|+|.|++|+.+|..|.+.|..|+ +.|.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQ-GWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEE-EEEc
Confidence 479999999999999999999999885 4554
No 411
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=85.63 E-value=1.6 Score=40.60 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=30.1
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+. .|
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~ 44 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSL-VD 44 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-Ee
Confidence 578999999997 89999999999999999874 45
No 412
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=85.61 E-value=0.76 Score=43.73 Aligned_cols=33 Identities=21% Similarity=0.431 Sum_probs=28.2
Q ss_pred CCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 222 IINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 222 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
+++++|+|.|. |-+|+++++.|.+.|++|+++.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~ 34 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGAD 34 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEE
Confidence 36789999998 9999999999999999997554
No 413
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=85.47 E-value=0.8 Score=43.91 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.5
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++|+|.|. |-+|+++++.|.+.|++|+++.-
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 578999999998 99999999999999999986653
No 414
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.47 E-value=1.7 Score=40.78 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=31.0
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|.
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~-~~~r 47 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADII-ACDI 47 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEEC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEec
Confidence 689999999997 8899999999999999997 4453
No 415
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=85.45 E-value=1.7 Score=40.87 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=30.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+.+|+.|.+.|++|+ +.|
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~-~~~ 60 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVF-ICA 60 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999997 8999999999999999986 555
No 416
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=85.44 E-value=1.6 Score=40.78 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=30.9
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |.+|+++|+.|.+.|++|+. .+
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~-~~ 52 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVV-AS 52 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-Ee
Confidence 4689999999997 89999999999999999874 44
No 417
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.43 E-value=0.98 Score=46.54 Aligned_cols=40 Identities=30% Similarity=0.439 Sum_probs=33.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHH
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 275 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~ 275 (428)
.+|+|+|.|-||..+|-.|.+.|.+|++ .| +|.+++.++.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g-~D----------id~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVG-YD----------VNPSIVERLR 61 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEE-EC----------SCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEE-EE----------CCHHHHHHHH
Confidence 5899999999999999999999999985 48 6666665554
No 418
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=85.36 E-value=1.5 Score=41.25 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=30.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++|++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~ 58 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTV-IAS 58 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEE-EEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEe
Confidence 478999999998 7899999999999999997 455
No 419
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=85.34 E-value=0.53 Score=47.88 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=32.3
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
++++++|.|.|.|..|..+|++|.++|++|+ ++|++
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~-~~D~~ 37 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPR-VMDTR 37 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCE-EEESS
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEE-EEECC
Confidence 3678999999999999999999999999985 78874
No 420
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=85.32 E-value=1.2 Score=40.49 Aligned_cols=35 Identities=20% Similarity=0.438 Sum_probs=30.7
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVS 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3578999999998 8999999999999999987543
No 421
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=85.32 E-value=1.2 Score=42.08 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=30.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~-~~~ 39 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVV-VTA 39 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-ECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEE
Confidence 578999999998 8899999999999999986 566
No 422
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=85.28 E-value=1.2 Score=41.42 Aligned_cols=35 Identities=29% Similarity=0.520 Sum_probs=31.0
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 43 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVV-VTD 43 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEE-EEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 3689999999998 8899999999999999986 555
No 423
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=85.25 E-value=1.2 Score=41.80 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=31.4
Q ss_pred CCCCceEEEEec-----------------cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-----------------GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-----------------GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++|++|+|.|- |.+|..+|+.|.+.|++|+.++.
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 578999999998 79999999999999999986654
No 424
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=85.20 E-value=0.86 Score=41.44 Aligned_cols=35 Identities=14% Similarity=0.283 Sum_probs=30.6
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~ 38 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITG 38 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 4678999999987 8999999999999999987443
No 425
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=85.19 E-value=1.9 Score=39.68 Aligned_cols=33 Identities=30% Similarity=0.528 Sum_probs=29.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 253 (428)
++++++++|.|. |.+|+.+++.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~ 35 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVAC 35 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 468899999997 899999999999999998744
No 426
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.19 E-value=0.45 Score=46.73 Aligned_cols=33 Identities=30% Similarity=0.437 Sum_probs=28.7
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEc
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 255 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD 255 (428)
++.++|+|+|.|.||+.+|..|...|. .|+ +.|
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~-l~D 39 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVV-LVD 39 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEE-EEe
Confidence 456799999999999999999999888 764 777
No 427
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=85.16 E-value=1.1 Score=41.61 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=30.4
Q ss_pred CCCCCceEEEEec-cH--HHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GN--VGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-Gn--VG~~~a~~L~~~GakvVaVs 254 (428)
.++++++++|.|. |. +|+.+|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~ 40 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTY 40 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEec
Confidence 4689999999998 56 99999999999999987443
No 428
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.16 E-value=0.52 Score=46.46 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=28.4
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDD 256 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~ 256 (428)
++.++|+|+|.|+||+.+|..|...|. .| .+.|.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v-~L~Di 39 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDV-VLFDI 39 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEE-EEECS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeE-EEEeC
Confidence 456799999999999999999999887 65 47774
No 429
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=85.08 E-value=1.1 Score=40.95 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=30.3
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILID 42 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 578999999987 9999999999999999987543
No 430
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=85.04 E-value=1.5 Score=42.37 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=30.3
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++|+|.|. |-+|+++|+.|.+.|++|+ +++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv-~~~ 39 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVA-IAD 39 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEE-EEE
Confidence 578999999998 8999999999999999987 445
No 431
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.04 E-value=1.2 Score=44.25 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=44.9
Q ss_pred CCCceEEEEec-cHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHH--hcCCCcCCCCcee-ccCC-C
Q psy8194 222 IINSKISIQGF-GNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVT--FTRSIKDFNEGEK-INDS-K 294 (428)
Q Consensus 222 l~g~~vaIqGf-GnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~--~~g~l~~~~~~~~-i~~~-~ 294 (428)
+..++|+|+|. |.||+.+|..|...|. .| .+.| +|.+++..... +.+. |+.... +++. .
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~ev-vLiD----------i~~~k~~g~a~DL~~~~---~~~~~i~~t~d~~ 71 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNL-CLYD----------PFAVGLEGVAEEIRHCG---FEGLNLTFTSDIK 71 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCE-EEEC----------SCHHHHHHHHHHHHHHC---CTTCCCEEESCHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEE-EEEe----------CCchhHHHHHHhhhhCc---CCCCceEEcCCHH
Confidence 46789999998 9999999999988884 55 4667 56555443211 1111 332211 1201 1
Q ss_pred cccccCceEEecccc
Q psy8194 295 EFWSIPCDILIPAAI 309 (428)
Q Consensus 295 ~il~~~~DIliPaA~ 309 (428)
+. -.+|||+|-|+.
T Consensus 72 ~a-l~dADvVvitaG 85 (343)
T 3fi9_A 72 EA-LTDAKYIVSSGG 85 (343)
T ss_dssp HH-HTTEEEEEECCC
T ss_pred HH-hCCCCEEEEccC
Confidence 22 248999998874
No 432
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.02 E-value=3 Score=39.88 Aligned_cols=31 Identities=35% Similarity=0.522 Sum_probs=27.3
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCC--EEEEEEc
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGA--KIVAIQD 255 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD 255 (428)
.++|+|+|.|+||..++..|.+.|. .|+ +.|
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~-l~d 39 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIV-LED 39 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEE-EEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEe
Confidence 4689999999999999999999997 774 667
No 433
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=85.00 E-value=1.1 Score=42.50 Aligned_cols=35 Identities=20% Similarity=0.096 Sum_probs=27.2
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.+++|++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~ 64 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVV-ITG 64 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEE
Confidence 4689999999997 8899999999999999987 555
No 434
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.99 E-value=1.1 Score=41.08 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=30.1
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~ 44 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIAD 44 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 578999999987 9999999999999999987543
No 435
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=84.98 E-value=0.76 Score=43.21 Aligned_cols=35 Identities=26% Similarity=0.484 Sum_probs=29.1
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++|+|.|. |.+|+++++.|.+.|++|+++..
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEec
Confidence 356789999999 99999999999999999986643
No 436
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=84.97 E-value=1.7 Score=39.82 Aligned_cols=33 Identities=12% Similarity=0.237 Sum_probs=27.7
Q ss_pred CCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 222 IINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 222 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~-~~~ 34 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVS-MMG 34 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEE
Confidence 35789999997 8999999999999999987 455
No 437
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=84.95 E-value=0.73 Score=44.69 Aligned_cols=106 Identities=18% Similarity=0.181 Sum_probs=58.8
Q ss_pred CCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCceeccCCCcccc-cC
Q psy8194 223 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 300 (428)
Q Consensus 223 ~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~i~~~~~il~-~~ 300 (428)
...+++|||+ |+.|+.+++.|.+.|.++|+-.+.... |- .+. +...+++.+++.. .+
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~-----g~-------------~i~---G~~vy~sl~el~~~~~ 70 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKG-----GQ-------------NVH---GVPVFDTVKEAVKETD 70 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCT-----TC-------------EET---TEEEESSHHHHHHHHC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCC-----Cc-------------eEC---CEeeeCCHHHHhhcCC
Confidence 3457899999 999999999999999987654443200 10 011 1222232233432 26
Q ss_pred ceEEeccccccccccccc---ccccceEEEec-CCCCCC--HHHHHHHHHCCCcee
Q psy8194 301 CDILIPAAIEDQITINNA---NNVTAKIILEG-ANGPTT--TEADDILRDKGIILA 350 (428)
Q Consensus 301 ~DIliPaA~~~~It~~na---~~l~akiIveg-AN~p~t--~ea~~iL~~rGI~vi 350 (428)
+|+.+-|...... .+.+ -+.+.+.++.. ...+.+ .+..++.++.|+.++
T Consensus 71 ~Dv~ii~vp~~~~-~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 71 ANASVIFVPAPFA-KDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp CCEEEECCCHHHH-HHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCEEEEccCHHHH-HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 7888776643322 2222 23366744443 333322 244566777899665
No 438
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=84.89 E-value=0.93 Score=42.68 Aligned_cols=31 Identities=16% Similarity=0.372 Sum_probs=28.5
Q ss_pred ceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+||+|.|. |-||+++++.|.+.|++|++++-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 58999998 99999999999999999998864
No 439
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=84.83 E-value=1.2 Score=41.26 Aligned_cols=35 Identities=14% Similarity=0.284 Sum_probs=31.0
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+. .|+
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~-~~r 51 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTI-CAR 51 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EcC
Confidence 689999999998 89999999999999999874 443
No 440
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=84.82 E-value=3.1 Score=40.75 Aligned_cols=222 Identities=13% Similarity=0.066 Sum_probs=114.9
Q ss_pred HHHHHHhcccCCCCcccCCCC----CCCHHHHHHHHHHhhhhc---CCc-----CCceeecccccCCCcCCCCChhHHHH
Q psy8194 140 RYTNEISSIIGLNKDIPAPDV----GTDMQIMSWMMDTYSTKK---NYT-----IPGIVTGKPISIGGSFGRQKATGRGV 207 (428)
Q Consensus 140 ~f~~~l~~~iG~~~dipapDv----gt~~~~ma~~~d~y~~~~---g~~-----~~~~vtGkp~~~GGs~~r~~aTg~Gv 207 (428)
+|-.+...+-|.-.++...+. |=+-.|-+.+...|...- ... .-.-..+.|+..||..+.-+.-+.-=
T Consensus 56 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaD 135 (307)
T 2i6u_A 56 SFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLAD 135 (307)
T ss_dssp HHHHHHHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHHEEEEEEECSSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHhhCCCCEEcCCCCCcCccHHHHH
Confidence 566666665554334433332 224567777766664321 100 00012356887777644444445554
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEecc--HHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHH-HHH----HHHhcCC
Q psy8194 208 FIIGSKIASKINLNIINSKISIQGFG--NVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPK-LQK----YVTFTRS 280 (428)
Q Consensus 208 ~~~~~~~~~~~g~~l~g~~vaIqGfG--nVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~-l~~----~~~~~g~ 280 (428)
.+.+++. .| +++|++|++.|=| ||..+.+..+...|++|+ ++- |.|+.++. +.+ ..++.|.
T Consensus 136 l~Ti~e~---~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~-~~~-------P~~~~~~~~~~~~~~~~a~~~G~ 203 (307)
T 2i6u_A 136 LQTIAER---KG-ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVT-VAA-------PEGFLPDPSVRAAAERRAQDTGA 203 (307)
T ss_dssp HHHHHHH---HS-CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEE-EEC-------CTTSCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHH---hC-CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEE-EEC-------CccccCCHHHHHHHHHHHHHcCC
Confidence 5555553 34 6899999999986 999999999999999986 433 55664432 332 2334431
Q ss_pred CcCCCCceeccCCCcccccCceEEeccccccccccccc-ccccceEEEecCCCCCCHHHHHHHHHCCCceeccccccccc
Q psy8194 281 IKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNA-NNVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGG 359 (428)
Q Consensus 281 l~~~~~~~~i~~~~~il~~~~DIliPaA~~~~It~~na-~~l~akiIvegAN~p~t~ea~~iL~~rGI~viPD~laNaGG 359 (428)
..+..+|+++.+ .++||+..-.....=.++.. .+.+. -.+-++|++--+.. +.+..+.+--=+|-|-
T Consensus 204 -----~~~~~~d~~eav-~~aDvvy~~~w~smg~~~~~~~~~~~-----~~~y~v~~~~l~~a-~~~ai~mH~lP~~Rg~ 271 (307)
T 2i6u_A 204 -----SVTVTADAHAAA-AGADVLVTDTWTSMGQENDGLDRVKP-----FRPFQLNSRLLALA-DSDAIVLHCLPAHRGD 271 (307)
T ss_dssp -----CEEEESCHHHHH-TTCSEEEECCSSCTTCTTSCCCSSGG-----GGGGCBCHHHHHHS-CTTCEEEECSCCCBTT
T ss_pred -----eEEEEECHHHHh-cCCCEEEecceecCCcccchHHHHHH-----HhhcCCCHHHHhhc-CCCcEEECCCCCCCCc
Confidence 112223234444 37888887554211001111 11110 01334677654433 4466666655566554
Q ss_pred hhhhHHHHHhhcccCCCCHHHHHHHHHHHH
Q psy8194 360 VIVSYFEWVQNLSNLLWTEQEINLRLNNII 389 (428)
Q Consensus 360 Vi~s~~E~~qn~~~~~w~~e~v~~~l~~~m 389 (428)
=|.+ |....-+... .+++..++.-.|
T Consensus 272 EI~~--eV~d~p~s~i--f~QaeN~l~~r~ 297 (307)
T 2i6u_A 272 EITD--AVMDGPASAV--WDEAENRLHAQK 297 (307)
T ss_dssp TBCH--HHHTSTTBCH--HHHHHHHHHHHH
T ss_pred ccCH--hHhCCcccHH--HHHHhcCHHHHH
Confidence 4432 3333222222 356666665554
No 441
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.81 E-value=1.1 Score=41.51 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=30.1
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
.++++++++|.|. |.+|+.+|+.|.+.|++|+ +.|+
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~r 39 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVF-AGRR 39 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEeC
Confidence 4678999999997 7899999999999999987 4553
No 442
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.80 E-value=0.8 Score=45.04 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=28.6
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 254 (428)
|.+|+|+|.|.||..+++++...|++|+++.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~ 211 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMAN 211 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 8999999999999999999999999987554
No 443
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=84.78 E-value=0.45 Score=46.71 Aligned_cols=31 Identities=32% Similarity=0.463 Sum_probs=27.4
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGA-KIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~ 256 (428)
++|+|+|.|.||..+|..|...|. . |.+.|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 589999999999999999999997 7 567783
No 444
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=84.78 E-value=1.5 Score=43.00 Aligned_cols=32 Identities=31% Similarity=0.254 Sum_probs=27.9
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC-EEEEEE
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVs 254 (428)
.|.+|+|+|.|.||..+++++...|+ +|+++.
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~ 222 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 222 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 67899999999999999999998999 576543
No 445
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=84.73 E-value=0.75 Score=44.12 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=27.7
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+.++++|+|.|. |.+|+++++.|.+.|++|+++.-
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r 51 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDL 51 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeC
Confidence 568899999998 99999999999999999987654
No 446
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=84.68 E-value=2.2 Score=40.02 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=31.5
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.+++|++++|.|. |-+|+.+|+.|.+.|++|+.+..
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999997 78999999999999999975544
No 447
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=84.60 E-value=1.5 Score=40.50 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=30.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+. .|
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~ 45 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVV-SS 45 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-EE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-Ee
Confidence 578999999997 89999999999999999874 44
No 448
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=84.50 E-value=1.1 Score=40.03 Aligned_cols=31 Identities=26% Similarity=0.399 Sum_probs=27.6
Q ss_pred ceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++|+|.|. |.+|+++++.|.+.|++|++++-
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 47999998 99999999999999999986653
No 449
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=84.49 E-value=2 Score=40.21 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=30.7
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 52 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVY-TCS 52 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEE-EEe
Confidence 3578999999997 8999999999999999987 445
No 450
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.47 E-value=1.1 Score=39.74 Aligned_cols=31 Identities=32% Similarity=0.343 Sum_probs=27.5
Q ss_pred ceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 225 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++|+|.|. |.+|+++++.|.+.|++|++++-
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEc
Confidence 47999995 99999999999999999986654
No 451
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=84.47 E-value=1.9 Score=40.20 Aligned_cols=34 Identities=32% Similarity=0.562 Sum_probs=30.0
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |-+|+.+++.|.+.|++|+. .|
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~-~~ 37 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVA-VD 37 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-Ee
Confidence 478899999997 89999999999999999874 44
No 452
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=84.44 E-value=1.2 Score=37.27 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=30.2
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC-CCEEEEEEcC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDD 256 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~-GakvVaVsD~ 256 (428)
+.++++|.|.|..|..+++.|.+. |.+++++.|.
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 457899999999999999999875 8999999984
No 453
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.42 E-value=1.9 Score=40.19 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=30.7
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.++++++++|.|. |-+|+++++.|.+.|++|+.+.
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~ 62 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWD 62 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 4689999999997 8999999999999999987443
No 454
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=84.41 E-value=1.3 Score=40.63 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=29.8
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 253 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~ 37 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAAC 37 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 578999999987 899999999999999998754
No 455
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=84.39 E-value=1.6 Score=40.48 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=29.7
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 36 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVY-ITG 36 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEe
Confidence 468899999987 8999999999999999987 445
No 456
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=84.38 E-value=2 Score=42.00 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=29.2
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 254 (428)
.|.+|+|+|.|.||..+++++...|++|+++.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~ 210 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVIS 210 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 68899999999999999999999999987665
No 457
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=84.23 E-value=0.82 Score=45.50 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=32.9
Q ss_pred CCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 221 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 221 ~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
.+++.+|+|.|.|-+|+.+|+.|...|..-+.+.|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 3688999999999999999999999998766788864
No 458
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=84.19 E-value=2 Score=40.36 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=29.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+.+|+.|.+.|++|+ +.|
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 53 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVF-VCA 53 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 468899999997 8999999999999999987 445
No 459
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=84.17 E-value=0.55 Score=46.16 Aligned_cols=33 Identities=36% Similarity=0.403 Sum_probs=28.3
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcC
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDD 256 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~ 256 (428)
..++|+|+|.|.+|..+|..|...|. . |.+.|.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 34689999999999999999999998 7 457783
No 460
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=84.10 E-value=1.2 Score=42.13 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=30.3
Q ss_pred CCCCCceEEEEec---cHHHHHHHHHHHHCCCEEEEE
Q psy8194 220 LNIINSKISIQGF---GNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 220 ~~l~g~~vaIqGf---GnVG~~~a~~L~~~GakvVaV 253 (428)
.++++++++|.|. |-+|+++|+.|.+.|++|+.+
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~ 40 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVG 40 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEe
Confidence 4678999999998 689999999999999998754
No 461
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=84.04 E-value=1.8 Score=40.89 Aligned_cols=45 Identities=18% Similarity=0.286 Sum_probs=36.6
Q ss_pred CceEEEEec-cHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcC
Q psy8194 224 NSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR 279 (428)
Q Consensus 224 g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g 279 (428)
.|+|+|.|. +.+|+.+|+.|.+.|++|+ ++| .|.+++.+..++.+
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~-~~~----------~~~~~~~~~~~~~~ 47 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVC-FID----------IDEKRSADFAKERP 47 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHTTCT
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHhcC
Confidence 478999987 7899999999999999985 777 56777777666543
No 462
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=84.02 E-value=1.8 Score=39.90 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=30.8
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+..
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 578999999997 89999999999999999975543
No 463
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=83.99 E-value=1.7 Score=41.79 Aligned_cols=96 Identities=17% Similarity=0.108 Sum_probs=54.8
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCCCcCCCCcee---ccCCCcccccCc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEK---INDSKEFWSIPC 301 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~l~~~~~~~~---i~~~~~il~~~~ 301 (428)
++|+|+|.|++|..++..|. .|..|. +.+. +.+.+.++.+..-.+.. ++... ++ .++-...++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~-~~~r----------~~~~~~~l~~~G~~~~~-~~~~~~~~~~-~~~~~~~~~ 68 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVT-VVTR----------RQEQAAAIQSEGIRLYK-GGEEFRADCS-ADTSINSDF 68 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEE-EECS----------CHHHHHHHHHHCEEEEE-TTEEEEECCE-EESSCCSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceE-EEEC----------CHHHHHHHHhCCceEec-CCCeeccccc-ccccccCCC
Confidence 68999999999999999999 998885 4553 23344444433212221 12111 11 111123478
Q ss_pred eEEecccccccccccccccc---cceEEEecCCCCCC
Q psy8194 302 DILIPAAIEDQITINNANNV---TAKIILEGANGPTT 335 (428)
Q Consensus 302 DIliPaA~~~~It~~na~~l---~akiIvegAN~p~t 335 (428)
|+++-|.-...+. +.++.+ ....|+--.||--.
T Consensus 69 D~vilavK~~~~~-~~l~~l~~~~~~~ivs~~nGi~~ 104 (307)
T 3ego_A 69 DLLVVTVKQHQLQ-SVFSSLERIGKTNILFLQNGMGH 104 (307)
T ss_dssp SEEEECCCGGGHH-HHHHHTTSSCCCEEEECCSSSHH
T ss_pred CEEEEEeCHHHHH-HHHHHhhcCCCCeEEEecCCccH
Confidence 9999887554432 222222 22337888887653
No 464
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=83.89 E-value=0.36 Score=45.51 Aligned_cols=32 Identities=13% Similarity=0.087 Sum_probs=28.2
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEE
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaV 253 (428)
..-++|.|+|.|++|..+|+.|.+.|.+|+++
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~ 35 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVL 35 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEEC
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEe
Confidence 34578999999999999999999999998753
No 465
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=83.82 E-value=3.6 Score=45.05 Aligned_cols=30 Identities=27% Similarity=0.498 Sum_probs=28.0
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD 255 (428)
++|+|+|.|-+|+.+|..+...|..|+ +.|
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~-l~D 346 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVV-AVE 346 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEE-EEC
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchh-ccc
Confidence 689999999999999999999999986 778
No 466
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=83.74 E-value=2.4 Score=41.89 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=27.2
Q ss_pred ceEEEEe-ccHHHHHHHHHHHHCC-CEEEEEEc
Q psy8194 225 SKISIQG-FGNVGSVAANLFFKAG-AKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqG-fGnVG~~~a~~L~~~G-akvVaVsD 255 (428)
.+|+|.| +|.+|+.+++.|.+.. ..|+++.+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~ 41 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAA 41 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 6899999 9999999999998764 68888875
No 467
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=83.73 E-value=2.5 Score=41.21 Aligned_cols=32 Identities=31% Similarity=0.348 Sum_probs=27.0
Q ss_pred CceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcC
Q psy8194 224 NSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDD 256 (428)
Q Consensus 224 g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~ 256 (428)
..+|+|+|.|+||..++..|...|. .| ...|.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev-~L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANEL-VLIDV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEE-EEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEE-EEEeC
Confidence 4689999999999999999998885 66 47783
No 468
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=83.68 E-value=1.6 Score=41.01 Aligned_cols=33 Identities=33% Similarity=0.467 Sum_probs=29.0
Q ss_pred CCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 222 IINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 222 l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++++++|.|. |.+|+.+|+.|.+.|++|+ +.|
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~ 35 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKIL-LGA 35 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEE-EEE
Confidence 46889999998 7899999999999999987 455
No 469
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=83.66 E-value=1.4 Score=40.58 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=30.9
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 43 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLD 43 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3678999999998 8999999999999999997553
No 470
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=83.65 E-value=1.7 Score=40.81 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=30.8
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
.++++++++|.|. |-+|+++|+.|.+.|++|+ +.|
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~ 59 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVI-GTA 59 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 4688999999998 8899999999999999987 444
No 471
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=83.60 E-value=1.7 Score=42.43 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=28.6
Q ss_pred CCceEEEE-eccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 223 INSKISIQ-GFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIq-GfGnVG~~~a~~L~~~GakvVaVs 254 (428)
.|.+|+|. |.|.||..+++++...|++|+++.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~ 199 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATA 199 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 68899999 679999999999999999987554
No 472
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=83.58 E-value=2 Score=40.56 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=28.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~ 59 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVG-ALG 59 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999997 8899999999999999987 455
No 473
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=83.55 E-value=1.9 Score=39.46 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=29.5
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |.+|+.+|+.|.+.|++|+.+.
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 35 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNY 35 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 367899999987 8999999999999999997543
No 474
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=83.53 E-value=0.97 Score=43.43 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=28.5
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~ 257 (428)
-.|+|+|.|.+|..+|..|++.|.+|+ |.|..
T Consensus 5 yDViIVGaGpaGl~~A~~La~~G~~V~-v~Er~ 36 (397)
T 3oz2_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTL-MIEKR 36 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEE-EECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEE-EEeCC
Confidence 359999999999999999999999985 88753
No 475
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=83.52 E-value=1.9 Score=42.70 Aligned_cols=72 Identities=21% Similarity=0.174 Sum_probs=45.1
Q ss_pred CCceEEEEeccHHHHHHHHHHHHCCC--EEEEEEcCCCeeeCCCCCCHHHHHHHHH--hcCCCcCCC-Cceec--cCCCc
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVT--FTRSIKDFN-EGEKI--NDSKE 295 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~Ga--kvVaVsD~~G~i~n~~GlD~~~l~~~~~--~~g~l~~~~-~~~~i--~~~~~ 295 (428)
..++|+|+|.|+||+.+|..|...|. .| .+.| ++.+++..... +... .|+ ..... +|.++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev-~L~D----------i~~~~~~g~a~DL~~~~--~~~~~~~i~~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEV-ALVD----------VMEDKLKGEMMDLEHGS--LFLHTAKIVSGKDYSV 86 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEE-EEEC----------SCHHHHHHHHHHHHHHG--GGSCCSEEEEESSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeE-EEEE----------CCHHHHHHHHHHhhhhh--hcccCCeEEEcCCHHH
Confidence 45799999999999999999988885 55 4778 56655544321 1110 121 12221 22333
Q ss_pred ccccCceEEecccc
Q psy8194 296 FWSIPCDILIPAAI 309 (428)
Q Consensus 296 il~~~~DIliPaA~ 309 (428)
-.+|||+|-++.
T Consensus 87 --~~daDiVIitaG 98 (330)
T 3ldh_A 87 --SAGSKLVVITAG 98 (330)
T ss_dssp --CSSCSEEEECCS
T ss_pred --hCCCCEEEEeCC
Confidence 368999987764
No 476
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=83.51 E-value=3.1 Score=41.15 Aligned_cols=54 Identities=20% Similarity=0.209 Sum_probs=39.5
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcCCC---------eeeCCCCCCHHHHHHHHH
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKT---------TIYNPNGFNIPKLQKYVT 276 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~~G---------~i~n~~GlD~~~l~~~~~ 276 (428)
+.+++|.|.|.|..|+.+++.+.+.|.+++.+ |.+. ..+..+-.|.+++.+..+
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~-d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~ 74 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVL-DPTKNSPCAQVADIEIVASYDDLKAIQHLAE 74 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEE-ESSTTCTTTTTCSEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEE-eCCCCCchHHhCCceEecCcCCHHHHHHHHH
Confidence 68899999999999999999999999999865 4321 122334456566555544
No 477
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=83.48 E-value=2.4 Score=39.72 Aligned_cols=51 Identities=18% Similarity=0.205 Sum_probs=37.5
Q ss_pred CCCCceEEEEec-cH--HHHHHHHHHHHCCCEEEEEEcCCCeeeCCCCCCHHHHHHHHHhcCC
Q psy8194 221 NIINSKISIQGF-GN--VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS 280 (428)
Q Consensus 221 ~l~g~~vaIqGf-Gn--VG~~~a~~L~~~GakvVaVsD~~G~i~n~~GlD~~~l~~~~~~~g~ 280 (428)
++++++++|.|. |+ +|+.+|+.|.+.|++|+ +.|.+- ..+.+.++.++.+.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~-~~~r~~--------~~~~~~~l~~~~~~ 76 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELA-FTYVGQ--------FKDRVEKLCAEFNP 76 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEE-EEECTT--------CHHHHHHHHGGGCC
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEE-EeeCch--------HHHHHHHHHHhcCC
Confidence 578999999996 56 99999999999999986 444321 33555565555443
No 478
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.43 E-value=1.3 Score=40.72 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=29.8
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCE-EEEEEcC
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAK-IVAIQDD 256 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~Gak-vVaVsD~ 256 (428)
++++++++|.|. |-+|+++|+.|.+.|++ |+ +.|.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~-~~~r 38 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFV-ILDR 38 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEE-EEES
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEE-EEec
Confidence 478999999997 89999999999999997 65 5554
No 479
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=83.43 E-value=2.2 Score=40.64 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=30.2
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVsD 255 (428)
++++++++|.|. |.+|+.+|+.|.+.|++|+ +.|
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~-~~~ 65 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIV-FND 65 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999997 8999999999999999987 444
No 480
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.42 E-value=2.8 Score=41.36 Aligned_cols=39 Identities=23% Similarity=0.415 Sum_probs=31.6
Q ss_pred HHHhCCCCCCceEEEEeccHHHHHHHHHHHHCCCEEEEEE
Q psy8194 215 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 215 ~~~~g~~l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVs 254 (428)
++..+.. .|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 187 l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~ 225 (369)
T 1uuf_A 187 LRHWQAG-PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT 225 (369)
T ss_dssp HHHTTCC-TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCCC-CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3333433 68899999999999999999999999987554
No 481
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=83.37 E-value=1.5 Score=40.69 Aligned_cols=33 Identities=33% Similarity=0.546 Sum_probs=29.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 253 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~ 46 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA 46 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 578999999997 899999999999999998754
No 482
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=83.93 E-value=0.23 Score=45.36 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=29.5
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCCEEEEEEcC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 256 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~GakvVaVsD~ 256 (428)
+++++|.|+|+|++|+.+++.|.+.|.+|+ +.|.
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~-~~~r 50 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVV-FGSR 50 (201)
Confidence 677899999999999999999999998875 5554
No 483
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=83.33 E-value=1.5 Score=41.32 Aligned_cols=35 Identities=20% Similarity=0.397 Sum_probs=31.1
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.+++|++++|.|. |-+|+++|+.|.+.|++|+.+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 3689999999998 8899999999999999997554
No 484
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=83.25 E-value=1.3 Score=43.35 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=28.3
Q ss_pred CCCceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcC
Q psy8194 222 IINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDD 256 (428)
Q Consensus 222 l~g~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~ 256 (428)
++.++|+|+|.|+||+.+|..|...|. .| .+.|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v-~l~Di 37 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDV-VLFDI 37 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEE-EEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceE-EEEeC
Confidence 356799999999999999999998876 65 47773
No 485
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=83.20 E-value=1.5 Score=41.15 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=30.8
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
+++++++++|.|. |.+|+.+|+.|.+.|++|+.+.
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 37 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAA 37 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 4688999999998 8999999999999999987443
No 486
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=83.20 E-value=3.4 Score=39.90 Aligned_cols=36 Identities=36% Similarity=0.365 Sum_probs=31.6
Q ss_pred CCCCCceEEEEec-cHHHHHHHHHHHH--CCCEEEEEEc
Q psy8194 220 LNIINSKISIQGF-GNVGSVAANLFFK--AGAKIVAIQD 255 (428)
Q Consensus 220 ~~l~g~~vaIqGf-GnVG~~~a~~L~~--~GakvVaVsD 255 (428)
.++++++|+|.|. |-+|+++++.|.+ .|++|+++..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 4678999999976 9999999999999 9999986654
No 487
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=83.19 E-value=1.1 Score=41.03 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=30.3
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 45 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIY 45 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence 578999999987 8999999999999999997554
No 488
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=83.19 E-value=1.2 Score=41.73 Aligned_cols=36 Identities=17% Similarity=0.331 Sum_probs=28.8
Q ss_pred CCCCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 219 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 219 g~~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
+.++++++++|.|. |-+|+++|+.|.+.|++|+.+.
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLA 47 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 45678999999998 8999999999999999997443
No 489
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=83.17 E-value=2 Score=41.61 Aligned_cols=32 Identities=16% Similarity=0.323 Sum_probs=28.9
Q ss_pred CCceEEEEeccHHHHHHHHHHHHC--CCEEEEEE
Q psy8194 223 INSKISIQGFGNVGSVAANLFFKA--GAKIVAIQ 254 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~~a~~L~~~--GakvVaVs 254 (428)
.|.+|+|+|.|.||..+++++... |++|+++.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~ 203 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGIS 203 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 889999999999999999999998 99987543
No 490
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=83.11 E-value=1.5 Score=40.36 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=30.3
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |.+|+.+++.|.+.|++|+.+.
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 38 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD 38 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 578999999997 8999999999999999997554
No 491
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=83.00 E-value=2.3 Score=39.74 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=30.4
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
+++|++++|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 49 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNY 49 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 689999999998 7899999999999999997443
No 492
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=82.87 E-value=1.5 Score=41.33 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=30.1
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~ 57 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIAS 57 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 578999999997 8999999999999999987543
No 493
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=82.72 E-value=1.4 Score=41.20 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=29.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 63 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCA 63 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 478999999987 9999999999999999987543
No 494
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=82.70 E-value=2.4 Score=41.04 Aligned_cols=31 Identities=35% Similarity=0.408 Sum_probs=27.3
Q ss_pred ceEEEEeccHHHHHHHHHHHHCCC-EEEEEEcC
Q psy8194 225 SKISIQGFGNVGSVAANLFFKAGA-KIVAIQDD 256 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~~Ga-kvVaVsD~ 256 (428)
++|+|+|.|+||+.++..|...|. . |.+.|.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 589999999999999999999996 7 567884
No 495
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.59 E-value=1.8 Score=40.51 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=29.3
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 253 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaV 253 (428)
++++++++|.|. |.+|+++|+.|.+.|++|+.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 36 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTIT 36 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 478899999987 899999999999999998744
No 496
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=82.58 E-value=1.7 Score=39.09 Aligned_cols=33 Identities=9% Similarity=0.106 Sum_probs=28.9
Q ss_pred CCCceEEEEec-cHHHHHHHHHHHHC--CCEEEEEE
Q psy8194 222 IINSKISIQGF-GNVGSVAANLFFKA--GAKIVAIQ 254 (428)
Q Consensus 222 l~g~~vaIqGf-GnVG~~~a~~L~~~--GakvVaVs 254 (428)
+++++|+|.|. |.+|+++++.|.+. |++|++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 46789999995 99999999999999 89997654
No 497
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=82.55 E-value=1.8 Score=40.54 Aligned_cols=34 Identities=12% Similarity=0.042 Sum_probs=27.9
Q ss_pred CCCCceEEEEec-cHHHHHHHHHHHHCCCEEEEEE
Q psy8194 221 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 254 (428)
Q Consensus 221 ~l~g~~vaIqGf-GnVG~~~a~~L~~~GakvVaVs 254 (428)
.+++++++|.|. |-+|+++|+.|.+.|++|+.++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~ 43 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTC 43 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 8999999999999999987443
No 498
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=82.53 E-value=3.5 Score=42.60 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=29.4
Q ss_pred CCceEEEEeccHHHHH-HHHHHHHCCCEEEEEEcCC
Q psy8194 223 INSKISIQGFGNVGSV-AANLFFKAGAKIVAIQDDK 257 (428)
Q Consensus 223 ~g~~vaIqGfGnVG~~-~a~~L~~~GakvVaVsD~~ 257 (428)
+.++|.|+|.|..|.+ +|++|.++|++| .++|.+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V-~~~D~~ 55 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQI-SGSDLA 55 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEE-EEECSS
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeE-EEEECC
Confidence 4579999999999996 899999999998 589954
No 499
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=82.52 E-value=1 Score=43.00 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=28.1
Q ss_pred CCCceEEEEe-ccHHHHHHHHHHHHCCCEEEEEEc
Q psy8194 222 IINSKISIQG-FGNVGSVAANLFFKAGAKIVAIQD 255 (428)
Q Consensus 222 l~g~~vaIqG-fGnVG~~~a~~L~~~GakvVaVsD 255 (428)
+++++|+|.| .|-+|+++++.|.+.|++|+++..
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 4678999999 699999999999999999986654
No 500
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=82.52 E-value=0.97 Score=45.07 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=25.7
Q ss_pred ceEEEEeccHHHHHHHHHHHH-CCCEEEEEEc
Q psy8194 225 SKISIQGFGNVGSVAANLFFK-AGAKIVAIQD 255 (428)
Q Consensus 225 ~~vaIqGfGnVG~~~a~~L~~-~GakvVaVsD 255 (428)
++|+|+|.|++|..+|..|.+ .|..|+ +.|
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~-~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVR-VLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEE-EEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEE-EEe
Confidence 589999999999999999988 498876 444
Done!