BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8195
(192 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|300312948|ref|YP_003777040.1| bifunctional diaminohydroxyphosphoribosyl aminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Herbaspirillum seropedicae SmR1]
gi|300075733|gb|ADJ65132.1| bifunctional enzyme: diaminohydroxyphosphoribosyl aminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase protein [Herbaspirillum seropedicae SmR1]
Length = 354
Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL QA ++++PNPRVGCVIVK++RII G+T+ PGGNHAEI A+ +AAA+G+DV
Sbjct: 1 MALALIQAGFGMLDTTPNPRVGCVIVKDQRIIGAGFTQPPGGNHAEIQAMADAAARGHDV 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +ALI++G+ +V+ AI DPNP+V+G+G+A+L +AGI V
Sbjct: 61 RGATVYVTLEPCSHFGRTPPCADALIRAGVARVVAAIADPNPMVAGQGLARLQAAGIEVS 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA +INIGF RM+ G PWVRMK A+SLD KT+L+N SQWIT + +R+D HIW
Sbjct: 121 CGLLEEEARDINIGFLHRMRTGRPWVRMKSAASLDGKTALHNGVSQWITGQAARDDGHIW 180
Query: 180 RARSCAILTG 189
RAR+CAI+ G
Sbjct: 181 RARACAIMAG 190
>gi|399018280|ref|ZP_10720461.1| riboflavin biosynthesis protein RibD [Herbaspirillum sp. CF444]
gi|398101680|gb|EJL91887.1| riboflavin biosynthesis protein RibD [Herbaspirillum sp. CF444]
Length = 372
Score = 261 bits (668), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
MTLAL QA+L + ++PNPRVGCVIVK++R+I G+T+ PG NHAEI A+ +A +G DV
Sbjct: 19 MTLALAQAELGMFTTTPNPRVGCVIVKDRRVIGAGFTQPPGDNHAEIQAMKDARERGNDV 78
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +AL+ +G+ KV+ A+ DPNPLV+GKG+ +L +AGI+V
Sbjct: 79 RGATAYVTLEPCSHYGRTPPCADALVNAGLGKVVSAMTDPNPLVAGKGLEKLQAAGIAVV 138
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLMQ A+E+NIGFF RMQ+G PW+RMK A+SLD KT+L+N SQWIT + +R+D H W
Sbjct: 139 SGLMQDAAHEMNIGFFKRMQQGTPWIRMKSAASLDGKTALHNGKSQWITGQAARDDGHFW 198
Query: 180 RARSCAILTG 189
RAR+CAI+TG
Sbjct: 199 RARACAIVTG 208
>gi|398832168|ref|ZP_10590332.1| riboflavin biosynthesis protein RibD [Herbaspirillum sp. YR522]
gi|398223705|gb|EJN10040.1| riboflavin biosynthesis protein RibD [Herbaspirillum sp. YR522]
Length = 373
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 151/190 (79%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL QA ++++PNPRVG VI +++R+I G+T+ PGGNHAEI AL +AA +G DV
Sbjct: 20 MALALIQAGFGMLSTNPNPRVGAVITRQQRVIGVGFTQPPGGNHAEIQALADAAMRGEDV 79
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPCS+FG TPPC +ALI++GI +V+ AI DPNPLV+G+G+A+L +AGI
Sbjct: 80 RGATIYVTLEPCSHFGRTPPCADALIRAGIGRVVAAITDPNPLVAGQGLAKLQAAGIETA 139
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++Q EA EINIGF RM+ G+PWVRMK A+SLD KT+L N SSQWITS+ +R+D HIW
Sbjct: 140 SGVLQDEAAEINIGFLKRMRTGLPWVRMKTAASLDGKTALNNGSSQWITSQAARDDGHIW 199
Query: 180 RARSCAILTG 189
RAR+CAI+ G
Sbjct: 200 RARACAIMAG 209
>gi|340788578|ref|YP_004754043.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Collimonas
fungivorans Ter331]
gi|340553845|gb|AEK63220.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Collimonas
fungivorans Ter331]
Length = 382
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ ALQ A+ + +S+PNP VGCVIVK+ ++I G+T+ PGGNHAEI AL +AAA+G+DV
Sbjct: 28 MSQALQLAENGLLSSAPNPAVGCVIVKDGQVIGSGFTQPPGGNHAEIQALQDAAAKGHDV 87
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +AL+ +G+ KV+ AI DPNPLV+G+G+A+L +AGI+V+
Sbjct: 88 RGATVYVTLEPCSHFGRTPPCADALVLAGVAKVVAAIGDPNPLVAGQGMARLQAAGIAVE 147
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +A E+NIGFF+RMQ G PWVR+K+A+SLD KT+L+N SQWITS+ +R+D H+W
Sbjct: 148 SGVLAAQARELNIGFFTRMQTGKPWVRLKVAASLDGKTALHNGQSQWITSQAARDDGHMW 207
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 208 RARAGAILTG 217
>gi|409407402|ref|ZP_11255853.1| bifuntional protein [Herbaspirillum sp. GW103]
gi|386433153|gb|EIJ45979.1| bifuntional protein [Herbaspirillum sp. GW103]
Length = 373
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL QA ++++PNPRVGCVIVKE+RII G+T+ PGG+HAEI A+ +AAA+G DV
Sbjct: 20 MALALLQAGFGMLDTTPNPRVGCVIVKERRIIGAGFTQPPGGHHAEIQAMADAAARGADV 79
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +ALI++G+ +V+ AI DPNPLV+G+G+A+L +AGI V
Sbjct: 80 RGATVYVTLEPCSHFGRTPPCADALIRAGVARVVAAIADPNPLVAGQGLARLQAAGIEVA 139
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA EINIGF RM+ G PWVRMK A+SLD KT+L+N SQWITS+ +R+D HIW
Sbjct: 140 CGLLEEEAREINIGFLHRMRTGRPWVRMKSAASLDGKTALHNGVSQWITSQAARDDGHIW 199
Query: 180 RARSCAILTG 189
RAR+CAIL G
Sbjct: 200 RARACAILAG 209
>gi|395761486|ref|ZP_10442155.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Janthinobacterium lividum PAMC 25724]
Length = 363
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 150/190 (78%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL+ A + +SPNPR+GCVIVK+ ++I G T++ G +HAE+ AL NAAA+G DV
Sbjct: 10 MRLALEWAARGLYTTSPNPRIGCVIVKDGQVIGAGVTQAAGHDHAEVQALANAAARGNDV 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC++AL+++G+ +V+ A+ DPNPLV+G+G+A+L +AGI+V
Sbjct: 70 RGATAYVTLEPCNHHGRTPPCSDALVRAGLGRVVAAMTDPNPLVAGQGLAKLEAAGIAVT 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ ++A+E+NIGFFSRMQRG PWVRMK A+SLD T+L+N SQWIT +R D H W
Sbjct: 130 TGVLAEQAHEMNIGFFSRMQRGKPWVRMKTAASLDGMTALHNGQSQWITGAAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 190 RARACAILTG 199
>gi|445495767|ref|ZP_21462811.1| bifunctional riboflavin biosynthesis protein RibD
[Janthinobacterium sp. HH01]
gi|444791928|gb|ELX13475.1| bifunctional riboflavin biosynthesis protein RibD
[Janthinobacterium sp. HH01]
Length = 356
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 149/190 (78%), Gaps = 1/190 (0%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL+ AK +SPNP +GCVIV++ ++I G T+ G +HAEI AL +A A+G+DV
Sbjct: 1 MALALEWAAKGLYTTSPNPHIGCVIVRDGQVIGAGVTQQAGSDHAEIQALKDAQARGHDV 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC++AL+++G+ +V+ A+ DPNPLV+G+G+A+L +AGI++
Sbjct: 61 RGATAYVTLEPCNHHGRTPPCSDALVRAGLGRVVAAMEDPNPLVAGQGMAKLAAAGIAIS 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ ++AYE+NIGFFSRM RG+PWVRMK A+SLD T+L+N SQWIT ++R D H W
Sbjct: 121 TGLLAEQAYELNIGFFSRMTRGLPWVRMKSAASLDGMTALHNGVSQWITGPQARADGHAW 180
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 181 RARACAILTG 190
>gi|421749984|ref|ZP_16187313.1| multifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Cupriavidus necator HPC(L)]
gi|409771052|gb|EKN53478.1| multifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Cupriavidus necator HPC(L)]
Length = 372
Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 142/176 (80%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNPRVGCV+ K ++I GYT+ G +HAEI AL NAAA+G+D +T Y+TLEPCS+
Sbjct: 24 TTPNPRVGCVLTKGGKVIGEGYTQPAGQDHAEIQALKNAAARGFDPVGATAYVTLEPCSH 83
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC +AL+++GIK+V+ A+ DPNP VSG+G+ +L AGI V+ GL++KEA ++NIG
Sbjct: 84 FGRTPPCADALVRAGIKRVVAAMEDPNPTVSGRGLQRLRDAGIDVRCGLLEKEARDLNIG 143
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F SRM RG+PWVR+K+A+SLD T+L++ +SQWIT + +R+D H WRAR+CAILTG
Sbjct: 144 FVSRMTRGLPWVRVKVAASLDGGTALHDGTSQWITGQAARDDGHAWRARACAILTG 199
>gi|393776208|ref|ZP_10364504.1| riboflavin biosynthesis protein RibD [Ralstonia sp. PBA]
gi|392716597|gb|EIZ04175.1| riboflavin biosynthesis protein RibD [Ralstonia sp. PBA]
Length = 380
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + + + ++PNPRVGCVIV++ ++ G+T+ GGNHAEI AL +AAA+G+ V +
Sbjct: 14 LALAERGMYL-TTPNPRVGCVIVRDGDVLGAGFTQPAGGNHAEIQALEDAAARGHGVAGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC +AL+K+GI +VI A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADALVKAGIVRVIAAMEDPNPKVSGRGLQRLREAGIEVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF +RM RG PWVR+KIA+SLD T+L N SQWIT + +R D H WRAR
Sbjct: 133 LEREARELNIGFVARMARGTPWVRLKIAASLDGTTALENGVSQWITGEAARADGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|83746190|ref|ZP_00943244.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ralstonia solanacearum UW551]
gi|207744096|ref|YP_002260488.1| riboflavin biosynthesis bifunctional protein ribd :
diaminohydroxyphosphoribosylaminopyrimidine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ralstonia solanacearum IPO1609]
gi|83727156|gb|EAP74280.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ralstonia solanacearum UW551]
gi|206595500|emb|CAQ62427.1| riboflavin biosynthesis bifunctional protein ribd :
diaminohydroxyphosphoribosylaminopyrimidine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ralstonia solanacearum IPO1609]
Length = 370
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCV+V++ II G+T+ PG +HAEI A+ +A A+G+DV +
Sbjct: 14 LALAENGL-FTTTPNPRVGCVLVRDDTIIGEGFTQPPGQDHAEIQAIKDAQARGHDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGLQKLREAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGVSQWITEAEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|386334308|ref|YP_006030479.1| riboflavin biosynthesis bifunctional protein ribd :
diaminohydroxyphosphoribosylaminopyrimidine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ralstonia solanacearum Po82]
gi|421900207|ref|ZP_16330570.1| riboflavin biosynthesis bifunctional protein ribd :
diaminohydroxyphosphoribosylaminopyrimidine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ralstonia solanacearum MolK2]
gi|206591413|emb|CAQ57025.1| riboflavin biosynthesis bifunctional protein ribd :
diaminohydroxyphosphoribosylaminopyrimidine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ralstonia solanacearum MolK2]
gi|334196758|gb|AEG69943.1| riboflavin biosynthesis bifunctional protein ribd :
diaminohydroxyphosphoribosylaminopyrimidine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ralstonia solanacearum Po82]
Length = 370
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCV+V++ II G+T+ PG +HAEI A+ +A A+G+DV +
Sbjct: 14 LALAENGL-FTTTPNPRVGCVLVRDDTIIGEGFTQPPGQDHAEIQAIKDAQARGHDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGLQKLREAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGVSQWITEAEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|300704870|ref|YP_003746473.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Ralstonia solanacearum CFBP2957]
gi|299072534|emb|CBJ43884.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Ralstonia solanacearum CFBP2957]
Length = 370
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCV+V++ II G+T+ PG +HAEI A+ +A A+G+DV +
Sbjct: 14 LALAENGL-FTTTPNPRVGCVLVRDDTIIGEGFTQPPGQDHAEIQAIKDAQARGHDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGLQKLREAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGVSQWITEAEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|421889101|ref|ZP_16320161.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Ralstonia solanacearum K60-1]
gi|378965521|emb|CCF96909.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Ralstonia solanacearum K60-1]
Length = 370
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 143/187 (76%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCV+V++ II G+T+ PG +HAEI A+ +A A G+DV +
Sbjct: 14 LALAENGL-FTTTPNPRVGCVLVRDDTIIGEGFTQPPGQDHAEIQAIKDAQAHGHDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGLQRLREAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGVSQWITETEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|152980375|ref|YP_001354124.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Janthinobacterium sp. Marseille]
gi|151280452|gb|ABR88862.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Janthinobacterium sp. Marseille]
Length = 363
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
+ LAL+ AK ++PNPRVGCVIVKE ++I GYT+ G HAE+ AL +AA +G+DV
Sbjct: 10 IRLALELAAKGMFTTTPNPRVGCVIVKENKVIGSGYTQPVGHAHAEVQALNDAADRGFDV 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
STVY+TLEPCS+ G TPPC +ALIK+ + +V+ AI DPNPLV+G+G+A+L +AGI V
Sbjct: 70 SGSTVYVTLEPCSHHGRTPPCADALIKARVARVVAAIADPNPLVAGQGLARLEAAGIQVS 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF SRMQ G PWVRMK A+SLD T+L+N SQWIT E+R D H W
Sbjct: 130 CGVLEAEAREMNIGFLSRMQHGKPWVRMKSAASLDGMTALHNGISQWITGDEARADGHYW 189
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 190 RARACAILTG 199
>gi|161525607|ref|YP_001580619.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans ATCC
17616]
gi|189349664|ref|YP_001945292.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia
multivorans ATCC 17616]
gi|160343036|gb|ABX16122.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans ATCC
17616]
gi|189333686|dbj|BAG42756.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia
multivorans ATCC 17616]
Length = 373
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 135/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK +I G+T+ PG +HAE+ AL +A A+G+DV STVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKHGEVIGEGHTQPPGQDHAEVQALKDARARGHDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI++ + KV+ A+ DPNPLVSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIEARVAKVVAAMEDPNPLVSGRGLGMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKAAASLDGRTALPSGESQWITGEAARADGHAWRARACAILTG 199
>gi|221201163|ref|ZP_03574203.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
CGD2M]
gi|221206384|ref|ZP_03579397.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
CGD2]
gi|221213661|ref|ZP_03586635.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
CGD1]
gi|221166450|gb|EED98922.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
CGD1]
gi|221173693|gb|EEE06127.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
CGD2]
gi|221179013|gb|EEE11420.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
CGD2M]
Length = 373
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 135/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK +I G+T+ PG +HAE+ AL +A A+G+DV STVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKHGEVIGEGHTQPPGQDHAEVQALKDARARGHDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI++ + KV+ A+ DPNPLVSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIEARVAKVVAAMEDPNPLVSGRGLGMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKAAASLDGRTALPSGESQWITGEAARADGHAWRARACAILTG 199
>gi|421473867|ref|ZP_15921943.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans CF2]
gi|400233328|gb|EJO62883.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans CF2]
Length = 373
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 135/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK +I G+T+ PG +HAE+ AL +A A+G+DV STVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKHGEVIGEGHTQPPGQDHAEVQALKDARARGHDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI++ + KV+ A+ DPNPLVSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIEARVAKVVAAMEDPNPLVSGRGLGMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKAAASLDGRTALPSGESQWITGEAARADGHAWRARACAILTG 199
>gi|344173915|emb|CCA89102.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Ralstonia syzygii R24]
Length = 370
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 143/187 (76%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCV+V++ II G+T+ G +HAEI A+ +A A+G+DV +
Sbjct: 14 LALAENGL-FTTTPNPRVGCVLVRDDTIIGEGFTQPAGQDHAEIQAIKDAQARGHDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++G+ +V+ A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGVARVVAAMEDPNPAVSGRGLQKLREAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGVSQWITETEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|300692257|ref|YP_003753252.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Ralstonia solanacearum PSI07]
gi|299079317|emb|CBJ51989.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Ralstonia solanacearum PSI07]
gi|344170031|emb|CCA82409.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[blood disease bacterium R229]
Length = 370
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 143/187 (76%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCV+V++ II G+T+ G +HAEI A+ +A A+G+DV +
Sbjct: 14 LALAENGL-FTTTPNPRVGCVLVRDDTIIGEGFTQPAGQDHAEIQAIKDAQARGHDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++G+ +V+ A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGVARVVAAMEDPNPAVSGRGLQKLREAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGVSQWITETEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|309780821|ref|ZP_07675562.1| riboflavin biosynthesis protein RibD [Ralstonia sp. 5_7_47FAA]
gi|404394273|ref|ZP_10986077.1| riboflavin biosynthesis protein RibD [Ralstonia sp. 5_2_56FAA]
gi|308920503|gb|EFP66159.1| riboflavin biosynthesis protein RibD [Ralstonia sp. 5_7_47FAA]
gi|348613371|gb|EGY62961.1| riboflavin biosynthesis protein RibD [Ralstonia sp. 5_2_56FAA]
Length = 370
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCVIV++ +I GYT+ G +HAEI A+ +A ++G DV +
Sbjct: 14 LALAEKGL-FTTTPNPRVGCVIVRDDTVIGEGYTQPAGQDHAEIQAIKDAQSRGQDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++GI +V+ A+ DPNP VSG+G+ +L AG+ V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGLQKLRDAGVDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGVSQWITEAEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|241662321|ref|YP_002980681.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12D]
gi|240864348|gb|ACS62009.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12D]
Length = 370
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCVIV++ +I GYT+ G +HAE+ A+ +A ++G DV +
Sbjct: 14 LALAEKGL-FTTTPNPRVGCVIVRDDTVIGEGYTQPAGQDHAEVQAIKDAQSRGQDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++GI +V+ A+ DPNP VSG+G+ +L AG+ V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGLQKLRDAGVDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGVSQWITEAEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|187927760|ref|YP_001898247.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12J]
gi|187724650|gb|ACD25815.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12J]
Length = 370
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCVIV++ +I GYT+ G +HAEI A+ +A ++G DV +
Sbjct: 14 LALAEKGL-FTTTPNPRVGCVIVRDDTVIGEGYTQPAGQDHAEIQAIKDAQSRGQDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++GI +V+ A+ DPNP VSG+G+ +L AG+ V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGITRVVAAMEDPNPAVSGRGLQKLRDAGVDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+RND H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGISQWITETEARNDGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|339326849|ref|YP_004686542.1| riboflavin biosynthesis protein RibD [Cupriavidus necator N-1]
gi|338167006|gb|AEI78061.1| riboflavin biosynthesis protein RibD [Cupriavidus necator N-1]
Length = 371
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 142/178 (79%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
N++PNPRVGCV+VK+ ++I G+T+ G +HAEI A+ +A A+G D +T Y+TLEPC
Sbjct: 22 FNTTPNPRVGCVLVKDGQVIGQGFTQPAGQDHAEIQAMKDALARGLDPAGATAYVTLEPC 81
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+FG TPPC +AL+++G+ +V+ A+ DPNP VSG+G+ +L AG+ V+ GL++KEA ++N
Sbjct: 82 SHFGRTPPCADALVRAGVARVVAAMEDPNPSVSGRGLQRLREAGVDVRCGLLEKEARDLN 141
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
IGF SRM RG+PWVR+K+A+S+D T+L++ +SQWIT + +R+D H WRAR+CAILTG
Sbjct: 142 IGFVSRMTRGLPWVRVKVAASMDGGTALHDGTSQWITGQAARDDGHAWRARACAILTG 199
>gi|430805374|ref|ZP_19432489.1| multifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Cupriavidus sp. HMR-1]
gi|429502411|gb|ELA00722.1| multifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Cupriavidus sp. HMR-1]
Length = 373
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 143/182 (78%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ ++PNPRVGCV++K+ +I GYT+ G +HAEI A+ +A ++G+D +T Y+T
Sbjct: 18 ARGMFTTTPNPRVGCVLMKDGMVIGEGYTQPAGQDHAEIQAMKDAISRGHDPAGATAYVT 77
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+FG TPPC +AL+++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL++KEA
Sbjct: 78 LEPCSHFGRTPPCADALVRAGIARVVAAMEDPNPTVSGRGLQRLRDAGIDVRCGLLEKEA 137
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
++NIGF SRM RG+PWVR+K+A+SLD T+L++ +SQWIT + +R+D H WRAR+CAIL
Sbjct: 138 RDLNIGFISRMTRGLPWVRVKVAASLDGGTALHDGTSQWITGQPARDDGHAWRARACAIL 197
Query: 188 TG 189
TG
Sbjct: 198 TG 199
>gi|299067739|emb|CBJ38948.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
deaminase (N-terminal);
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Ralstonia solanacearum CMR15]
Length = 370
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCV+V++ +I G+T+ G +HAEI A+ +A A+G+DV +
Sbjct: 14 LALAENGL-FTTTPNPRVGCVLVRDDTVIGEGFTQPAGHDHAEIQAIKDAQARGHDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + LI++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLIEAGIARVVTAMEDPNPTVSGRGLQRLRQAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+R D H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALNNGISQWITEAEARADGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|94311620|ref|YP_584830.1| multifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Cupriavidus metallidurans CH34]
gi|93355472|gb|ABF09561.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Cupriavidus metallidurans CH34]
Length = 373
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 143/182 (78%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ ++PNPRVGCV++K+ +I GYT+ G +HAEI A+ +A ++G+D +T Y+T
Sbjct: 18 ARGMFTTTPNPRVGCVLMKDGVVIGEGYTQPAGQDHAEIQAMKDAISRGHDPAGATAYVT 77
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+FG TPPC +AL+++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL++KEA
Sbjct: 78 LEPCSHFGRTPPCADALVRAGIARVVAAMEDPNPTVSGRGLQRLRDAGIDVRCGLLEKEA 137
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
++NIGF SRM RG+PWVR+K+A+SLD T+L++ +SQWIT + +R+D H WRAR+CAIL
Sbjct: 138 RDLNIGFISRMTRGLPWVRVKVAASLDGGTALHDGTSQWITGQPARDDGHAWRARACAIL 197
Query: 188 TG 189
TG
Sbjct: 198 TG 199
>gi|427405000|ref|ZP_18895456.1| riboflavin biosynthesis protein RibD [Massilia timonae CCUG 45783]
gi|425716709|gb|EKU79679.1| riboflavin biosynthesis protein RibD [Massilia timonae CCUG 45783]
Length = 378
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL A + ++PNPR+GCVIVK+ +I G+T+ G HAEI AL +AAA+G DV
Sbjct: 21 MALALDWAARGMYITAPNPRIGCVIVKDGVVIGAGHTQPAGQAHAEIQALRDAAARGNDV 80
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T Y+TLEPCS+ G TPPC+ AL+++G K+V+ A+ DPNPLV+G+G+AQL +AGI VK
Sbjct: 81 HGATAYVTLEPCSHHGRTPPCSNALVQAGFKRVVAAMVDPNPLVAGRGLAQLEAAGIEVK 140
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ + A E+N+GFFSRM RG+PWVR+K+A+SLD T+L SQWIT +++R D H W
Sbjct: 141 AGVLAEAAQELNVGFFSRMVRGLPWVRLKVAASLDGATALAGGESQWITGEQARADGHAW 200
Query: 180 RARSCAILTG 189
RAR+ AI+TG
Sbjct: 201 RARASAIVTG 210
>gi|17545434|ref|NP_518836.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Ralstonia solanacearum GMI1000]
gi|17427726|emb|CAD14245.1| probable riboflavin biosynthesis bifunctional ribd :
diaminohydroxyphosphoribosylaminopyrimidine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
oxidoreductase protein [Ralstonia solanacearum GMI1000]
Length = 370
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L ++PNPRVGCV+V++ +I G+T+ G +HAEI A+ +A A+G+DV +
Sbjct: 14 LALAENGL-FTTTPNPRVGCVLVRDDTVIGEGFTQPAGQDHAEIQAIKDAQARGHDVRGA 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+FG TPPC + L+++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL
Sbjct: 73 TAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPTVSGRGLQRLREAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+++EA E+NIGF SRM RG PWVR+K+ +SLD +T+L N SQWIT E+R D H WRAR
Sbjct: 133 LEREARELNIGFVSRMTRGTPWVRVKVGASLDGRTALDNGISQWITEAEARADGHRWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|113868804|ref|YP_727293.1| pyrimidine deaminase/reductase [Ralstonia eutropha H16]
gi|113527580|emb|CAJ93925.1| pyrimidine deaminase/reductase [Ralstonia eutropha H16]
Length = 371
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 141/176 (80%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNPRVGCV+VK+ ++I G+T+ G +HAEI A+ +A A+G D ST Y+TLEPCS+
Sbjct: 24 TTPNPRVGCVLVKDGQVIGQGFTQPAGQDHAEIQAMKDALARGLDPAGSTAYVTLEPCSH 83
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC +AL+++G+ +V+ A+ DPNP VSG+G+ +L AG+ V+ GL++KEA ++NIG
Sbjct: 84 FGRTPPCADALVRAGVARVVAAMEDPNPSVSGRGLQRLREAGVDVRCGLLEKEARDLNIG 143
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F SRM RG+PWVR+K+A+S+D T+L++ +SQWIT + +R+D H WRAR+CAILTG
Sbjct: 144 FVSRMTRGLPWVRIKVAASMDGGTALHDGTSQWITGQAARDDGHAWRARACAILTG 199
>gi|421470357|ref|ZP_15918739.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans ATCC
BAA-247]
gi|400227864|gb|EJO57839.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans ATCC
BAA-247]
Length = 628
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 106/176 (60%), Positives = 135/176 (76%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNPRVGCVIVK +I G+T+ PG +HAE+ AL +A A+G+DV STVY+TLEPCS+
Sbjct: 24 TTPNPRVGCVIVKHGEVIGEGHTQPPGQDHAEVQALKDARARGHDVAGSTVYVTLEPCSH 83
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC ALI++ + KV+ A+ DPNPLVSG+G+ L AGI V+ GL+ EA E+NIG
Sbjct: 84 FGRTPPCANALIEARVAKVVAAMEDPNPLVSGRGLGMLRDAGIDVRCGLLAHEAGELNIG 143
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 144 FVSRMTRGRPWVRMKAAASLDGRTALPSGESQWITGEAARADGHAWRARACAILTG 199
>gi|194290427|ref|YP_002006334.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
(n-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase [Cupriavidus taiwanensis LMG 19424]
gi|193224262|emb|CAQ70271.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase [Cupriavidus taiwanensis LMG 19424]
Length = 371
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 142/178 (79%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
N++PNPRVGCV++K+ ++I G+T+ G +HAEI A+ +A ++G D +T Y+TLEPC
Sbjct: 22 FNTTPNPRVGCVLIKDGQVIGQGFTQPAGQDHAEIQAMKDALSRGLDPAGATAYVTLEPC 81
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+FG TPPC +AL+++G+ +V+ A+ DPNP VSG+G+ +L AGI V+ GL++KEA ++N
Sbjct: 82 SHFGRTPPCADALVRAGVARVVAAMEDPNPSVSGRGLQRLRDAGIDVRCGLLEKEARDLN 141
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
IGF SRM RG+PWVR+K+A+S+D T+L++ +SQWIT + +R+D H WRAR+CAILTG
Sbjct: 142 IGFVSRMTRGLPWVRVKVAASMDGGTALHDGTSQWITGQAARDDGHAWRARACAILTG 199
>gi|78065536|ref|YP_368305.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia sp.
383]
gi|77966281|gb|ABB07661.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia sp.
383]
Length = 373
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 140/189 (74%), Gaps = 3/189 (1%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
+TLA A+ ++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+GYDV
Sbjct: 14 LTLA---ARGMYTTAPNPRVGCVIVKDGEVIGEGFTQPAGQDHAEVQALKDARARGYDVA 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
STVY+TLEPCS+FG TPPC ALI++ + KV+ A+ DPNP VSG+G+ L AGI V+
Sbjct: 71 GSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRC 130
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
GL+ EA E+NIGF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WR
Sbjct: 131 GLLAHEAGELNIGFVSRMTRGRPWVRMKTAASLDGRTALPSGESQWITGEAARLDGHAWR 190
Query: 181 ARSCAILTG 189
AR+CAILTG
Sbjct: 191 ARACAILTG 199
>gi|238026457|ref|YP_002910688.1| pyrimidine reductase, riboflavin biosynthesis [Burkholderia glumae
BGR1]
gi|237875651|gb|ACR27984.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia glumae
BGR1]
Length = 372
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 136/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I GYT+ G +HAE+ A+ +A ++G+D+ +TVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKDGVVIGEGYTQPAGQDHAEVQAMKDARSRGHDLRGATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC + LI + + +VI A+ DPNP VSG+G+A L AGI V+ GL+ +EA+E+NI
Sbjct: 83 HFGRTPPCAQGLIDARVARVIAAMEDPNPAVSGRGLAMLRDAGIEVRCGLLAQEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PW+RMKIA+SLD +T+L SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWLRMKIAASLDGRTALPTGESQWITGEAARRDGHAWRARACAILTG 199
>gi|374370770|ref|ZP_09628765.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Cupriavidus
basilensis OR16]
gi|373097631|gb|EHP38757.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Cupriavidus
basilensis OR16]
Length = 372
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 140/176 (79%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNPRVGCV+ K+ +II G+T+ G +HAEI AL +AAA+G D +T ++TLEPCS+
Sbjct: 24 TTPNPRVGCVLSKDGKIIGQGFTQPAGQDHAEIQALKDAAARGNDPKGATAFVTLEPCSH 83
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC +AL+++GI +V+ A+ DPNP VSG+G+ +L AG+ V+ GL++KEA E+NIG
Sbjct: 84 FGRTPPCADALVRAGIARVVAAMEDPNPTVSGRGLQRLREAGVDVRCGLLEKEARELNIG 143
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F +RM RG+PWVR+K+A+SLD T+L++ SSQWIT + +R+D H WRAR+ AILTG
Sbjct: 144 FVNRMTRGLPWVRVKVAASLDGGTALHDGSSQWITGQAARDDGHAWRARASAILTG 199
>gi|167580933|ref|ZP_02373807.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
TXDOH]
Length = 378
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 135/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 199
>gi|257138273|ref|ZP_05586535.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
E264]
Length = 369
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 135/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 14 TTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 73
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 74 HFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 133
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 134 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 190
>gi|83718892|ref|YP_442086.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
E264]
gi|83652717|gb|ABC36780.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
E264]
Length = 378
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 135/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 199
>gi|107022039|ref|YP_620366.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia AU
1054]
gi|116688983|ref|YP_834606.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia
HI2424]
gi|105892228|gb|ABF75393.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia
cenocepacia AU 1054]
gi|116647072|gb|ABK07713.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Burkholderia cenocepacia HI2424]
Length = 373
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 133/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A ++GYDV STVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARSRGYDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALPSGESQWITGEAARLDGHAWRARACAILTG 199
>gi|170732274|ref|YP_001764221.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia
MC0-3]
gi|169815516|gb|ACA90099.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia
MC0-3]
Length = 373
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 133/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A ++GYDV STVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARSRGYDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALPSGESQWITGEAARLDGHAWRARACAILTG 199
>gi|254246078|ref|ZP_04939399.1| Pyrimidine reductase [Burkholderia cenocepacia PC184]
gi|124870854|gb|EAY62570.1| Pyrimidine reductase [Burkholderia cenocepacia PC184]
Length = 373
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 133/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A ++GYDV STVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARSRGYDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLANEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALPSGESQWITGEAARLDGHAWRARACAILTG 199
>gi|206561395|ref|YP_002232160.1| multifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Burkholderia cenocepacia J2315]
gi|444358905|ref|ZP_21160275.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia BC7]
gi|444372253|ref|ZP_21171736.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia
K56-2Valvano]
gi|198037437|emb|CAR53372.1| multifunctional riboflavin biosynthetic protein [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase]
[Burkholderia cenocepacia J2315]
gi|443593882|gb|ELT62585.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia
K56-2Valvano]
gi|443603043|gb|ELT71073.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia BC7]
Length = 373
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 133/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A ++GYDV STVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARSRGYDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALPSGESQWITGEAARLDGHAWRARACAILTG 199
>gi|421867311|ref|ZP_16298970.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Burkholderia cenocepacia H111]
gi|358072725|emb|CCE49848.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Burkholderia cenocepacia H111]
Length = 373
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 133/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A ++GYDV STVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARSRGYDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALPSGESQWITGEAARLDGHAWRARACAILTG 199
>gi|167837547|ref|ZP_02464430.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
MSMB43]
gi|424903209|ref|ZP_18326722.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
MSMB43]
gi|390931082|gb|EIP88483.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
MSMB43]
Length = 374
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 135/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC+ ALI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCSHALIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R D H WRAR+CA+LTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAAREDGHKWRARACAVLTG 199
>gi|167619029|ref|ZP_02387660.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
Bt4]
Length = 306
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 135/176 (76%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS+
Sbjct: 24 TTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCSH 83
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC ALI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NIG
Sbjct: 84 FGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNIG 143
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 144 FVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 199
>gi|402567320|ref|YP_006616665.1| riboflavin biosynthesis protein RibD [Burkholderia cepacia GG4]
gi|402248517|gb|AFQ48971.1| riboflavin biosynthesis protein RibD [Burkholderia cepacia GG4]
Length = 373
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 140/189 (74%), Gaps = 3/189 (1%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
+TLA A+ ++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G+DV
Sbjct: 14 LTLA---ARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQDHAEVQALKDARARGHDVA 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
STVY+TLEPCS+FG TPPC ALI++ + KV+ A+ DPNP VSG+G+ L AGI V+
Sbjct: 71 GSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRC 130
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
GL+ EA E+NIGF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WR
Sbjct: 131 GLLANEAGELNIGFVSRMTRGRPWVRMKTAASLDARTALPSGESQWITGEAARLDGHAWR 190
Query: 181 ARSCAILTG 189
AR+CAILTG
Sbjct: 191 ARACAILTG 199
>gi|115350875|ref|YP_772714.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria AMMD]
gi|115280863|gb|ABI86380.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia
ambifaria AMMD]
Length = 373
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 139/189 (73%), Gaps = 3/189 (1%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
+TLA A+ ++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G+DV
Sbjct: 14 LTLA---ARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQDHAEVQALKDARARGHDVA 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
STVY+TLEPCS+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+
Sbjct: 71 GSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRC 130
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
GL+ EA E+NIGF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WR
Sbjct: 131 GLLANEAGELNIGFVSRMTRGRPWVRMKTAASLDARTALPSGESQWITGEAARLDGHAWR 190
Query: 181 ARSCAILTG 189
AR+CAILTG
Sbjct: 191 ARACAILTG 199
>gi|170703035|ref|ZP_02893863.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria
IOP40-10]
gi|170132059|gb|EDT00559.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria
IOP40-10]
Length = 373
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 139/189 (73%), Gaps = 3/189 (1%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
+TLA A+ ++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G+DV
Sbjct: 14 LTLA---ARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQDHAEVQALKDARARGHDVA 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
STVY+TLEPCS+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+
Sbjct: 71 GSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRC 130
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
GL+ EA E+NIGF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WR
Sbjct: 131 GLLANEAGELNIGFVSRMTRGRPWVRMKTAASLDARTALPSGESQWITGEAARLDGHAWR 190
Query: 181 ARSCAILTG 189
AR+CAILTG
Sbjct: 191 ARACAILTG 199
>gi|254253006|ref|ZP_04946324.1| Pyrimidine reductase [Burkholderia dolosa AUO158]
gi|124895615|gb|EAY69495.1| Pyrimidine reductase [Burkholderia dolosa AUO158]
Length = 373
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 133/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G+DV +TVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDGSVIGEGFTQPAGQDHAEVQALKDARARGHDVAGATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLTMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALPSGESQWITGEAARADGHAWRARACAILTG 199
>gi|329903444|ref|ZP_08273466.1| Diamino hydroxy phospho ribosyl amin opyrimidine deaminase
[Oxalobacteraceae bacterium IMCC9480]
gi|327548371|gb|EGF33053.1| Diamino hydroxy phospho ribosyl amin opyrimidine deaminase
[Oxalobacteraceae bacterium IMCC9480]
Length = 363
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 146/190 (76%), Gaps = 1/190 (0%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL+ AK ++PNPRVGCV+V++ ++ G+T++ G HAEI AL +A A+G V
Sbjct: 10 MALALEWAAKGMFITAPNPRVGCVVVRDGVVLGAGHTQAAGQAHAEIQALADAQARGNSV 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPCS+ G TPPC +A+I++G+ +V+ AI DPNPLV+G G+ +L +AGI+V
Sbjct: 70 TGATLYVTLEPCSHHGRTPPCADAIIRAGVVRVVSAIADPNPLVAGAGLERLRAAGIAVT 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+++ A E+NIGFFSRMQ G PWVRMK A+SLD KT+L+N +SQWIT+ +R+D H+W
Sbjct: 130 TEVLRDAALEMNIGFFSRMQSGKPWVRMKAAASLDGKTALHNGASQWITAAPARDDGHVW 189
Query: 180 RARSCAILTG 189
RAR+CA+LTG
Sbjct: 190 RARACAVLTG 199
>gi|73540480|ref|YP_295000.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Ralstonia
eutropha JMP134]
gi|72117893|gb|AAZ60156.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Ralstonia eutropha JMP134]
Length = 371
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 138/178 (77%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNPRVGCV+ K +II G+T+ G +HAEI AL +A +G D +T Y+TLEPC
Sbjct: 22 FTTTPNPRVGCVLSKNGQIIGQGFTQPAGQDHAEIQALKDAQTRGIDPAGATAYVTLEPC 81
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+FG TPPC +AL+++GI +V+ A+ DPNP VSG+G+ +L AGI V+ GL++KEA ++N
Sbjct: 82 SHFGRTPPCADALVRAGIARVVAAMEDPNPSVSGRGLQRLRDAGIDVRCGLLEKEARDLN 141
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
IGF SRM RG+PWVR+K+A+S+D T+L++ +SQWIT + +R+D H WRAR+CAILTG
Sbjct: 142 IGFVSRMTRGLPWVRVKVAASMDGGTALHDGTSQWITGQAARDDGHAWRARACAILTG 199
>gi|171315490|ref|ZP_02904726.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria MEX-5]
gi|171099327|gb|EDT44065.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria MEX-5]
Length = 373
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 138/189 (73%), Gaps = 3/189 (1%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
+TLA A+ ++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL NA +G+DV
Sbjct: 14 LTLA---ARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQDHAEVQALKNARTRGHDVA 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
STVY+TLEPCS+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+
Sbjct: 71 GSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRC 130
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
GL+ EA E+NIGF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WR
Sbjct: 131 GLLANEAGELNIGFVSRMTRGRPWVRMKTAASLDARTALPSGESQWITGEAARLDGHAWR 190
Query: 181 ARSCAILTG 189
AR+CAILTG
Sbjct: 191 ARACAILTG 199
>gi|167816999|ref|ZP_02448679.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 91]
Length = 369
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 134/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 14 TTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 73
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC LI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 74 HFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 133
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 134 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 190
>gi|167895478|ref|ZP_02482880.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
7894]
gi|167920101|ref|ZP_02507192.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
BCC215]
gi|237813427|ref|YP_002897878.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
MSHR346]
gi|237504754|gb|ACQ97072.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
MSHR346]
Length = 378
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 134/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC LI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 199
>gi|53720234|ref|YP_109220.1| multifunctional riboflavin biosynthetic protein [deaminase,
reductase [Burkholderia pseudomallei K96243]
gi|76810186|ref|YP_334473.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1710b]
gi|126453712|ref|YP_001067304.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1106a]
gi|134280288|ref|ZP_01766999.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
305]
gi|167720794|ref|ZP_02404030.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
DM98]
gi|167739778|ref|ZP_02412552.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 14]
gi|167825410|ref|ZP_02456881.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 9]
gi|167846901|ref|ZP_02472409.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
B7210]
gi|167903861|ref|ZP_02491066.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
NCTC 13177]
gi|226193754|ref|ZP_03789356.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
Pakistan 9]
gi|242314762|ref|ZP_04813778.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1106b]
gi|254196130|ref|ZP_04902555.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
S13]
gi|254259958|ref|ZP_04951012.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1710a]
gi|254298894|ref|ZP_04966344.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
406e]
gi|386860808|ref|YP_006273757.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1026b]
gi|403519730|ref|YP_006653864.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
BPC006]
gi|418533278|ref|ZP_13099145.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1026a]
gi|52210648|emb|CAH36632.1| multifunctional riboflavin biosynthetic protein [deaminase,
reductase [Burkholderia pseudomallei K96243]
gi|76579639|gb|ABA49114.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1710b]
gi|126227354|gb|ABN90894.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1106a]
gi|134248295|gb|EBA48378.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
305]
gi|157808908|gb|EDO86078.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
406e]
gi|169652874|gb|EDS85567.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
S13]
gi|225934059|gb|EEH30044.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
Pakistan 9]
gi|242138001|gb|EES24403.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1106b]
gi|254218647|gb|EET08031.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1710a]
gi|385361313|gb|EIF67198.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1026a]
gi|385657936|gb|AFI65359.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1026b]
gi|403075373|gb|AFR16953.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
BPC006]
Length = 378
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 134/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC LI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 199
>gi|126440570|ref|YP_001060025.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
668]
gi|167912128|ref|ZP_02499219.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
112]
gi|217420854|ref|ZP_03452359.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
576]
gi|254180983|ref|ZP_04887581.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1655]
gi|254191828|ref|ZP_04898331.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
Pasteur 52237]
gi|418380214|ref|ZP_12966205.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
354a]
gi|418540060|ref|ZP_13105627.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1258a]
gi|418546310|ref|ZP_13111534.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1258b]
gi|418557349|ref|ZP_13121944.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
354e]
gi|126220063|gb|ABN83569.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
668]
gi|157939499|gb|EDO95169.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
Pasteur 52237]
gi|184211522|gb|EDU08565.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1655]
gi|217396266|gb|EEC36283.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
576]
gi|385362897|gb|EIF68690.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1258a]
gi|385364903|gb|EIF70602.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
1258b]
gi|385364991|gb|EIF70688.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
354e]
gi|385377591|gb|EIF82155.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
354a]
Length = 380
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 134/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC LI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 199
>gi|330815804|ref|YP_004359509.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia
gladioli BSR3]
gi|327368197|gb|AEA59553.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia
gladioli BSR3]
Length = 372
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 134/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNPRVGCVIVK++ +I GYT+ G +HAE+ A+ +A ++G+D+ +TVY+TLEPCS
Sbjct: 23 TTSPNPRVGCVIVKDEVVIGEGYTQPAGQDHAEVQAMKDARSRGHDLRGATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC LI + + KV+ A+ DPNPLVSGKG+ L AGI V+ GL+ +EA E+NI
Sbjct: 83 HFGRTPPCALGLIDARVAKVVAAMEDPNPLVSGKGLGMLRDAGIEVRCGLLAQEAREMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGQPWVRMKSAISLDGRTALPDGQSQWITGEAARADGHAWRARACAILTG 199
>gi|53725938|ref|YP_103713.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC
23344]
gi|67643977|ref|ZP_00442720.1| riboflavin biosynthesis protein RibD [Burkholderia mallei GB8 horse
4]
gi|121598467|ref|YP_992112.1| riboflavin biosynthesis protein RibD [Burkholderia mallei SAVP1]
gi|124385806|ref|YP_001028557.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC
10229]
gi|126449378|ref|YP_001081545.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC
10247]
gi|166998345|ref|ZP_02264205.1| riboflavin biosynthesis protein RibD [Burkholderia mallei PRL-20]
gi|254175573|ref|ZP_04882233.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC
10399]
gi|254202412|ref|ZP_04908775.1| riboflavin biosynthesis protein RibD [Burkholderia mallei FMH]
gi|254207743|ref|ZP_04914093.1| riboflavin biosynthesis protein RibD [Burkholderia mallei JHU]
gi|254356356|ref|ZP_04972632.1| riboflavin biosynthesis protein RibD [Burkholderia mallei
2002721280]
gi|52429361|gb|AAU49954.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC
23344]
gi|121227277|gb|ABM49795.1| riboflavin biosynthesis protein RibD [Burkholderia mallei SAVP1]
gi|124293826|gb|ABN03095.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC
10229]
gi|126242248|gb|ABO05341.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC
10247]
gi|147746659|gb|EDK53736.1| riboflavin biosynthesis protein RibD [Burkholderia mallei FMH]
gi|147751637|gb|EDK58704.1| riboflavin biosynthesis protein RibD [Burkholderia mallei JHU]
gi|148025353|gb|EDK83507.1| riboflavin biosynthesis protein RibD [Burkholderia mallei
2002721280]
gi|160696617|gb|EDP86587.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC
10399]
gi|238525453|gb|EEP88881.1| riboflavin biosynthesis protein RibD [Burkholderia mallei GB8 horse
4]
gi|243065414|gb|EES47600.1| riboflavin biosynthesis protein RibD [Burkholderia mallei PRL-20]
Length = 380
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 134/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC LI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 199
>gi|167586436|ref|ZP_02378824.1| riboflavin biosynthesis protein RibD [Burkholderia ubonensis Bu]
Length = 257
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 133/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A ++G+DV STVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARSRGHDVAGSTVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAHEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT ++R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALPSGESQWITGDDARLDGHAWRARACAILTG 199
>gi|172059887|ref|YP_001807539.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria
MC40-6]
gi|171992404|gb|ACB63323.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria
MC40-6]
Length = 373
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 139/189 (73%), Gaps = 3/189 (1%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
+TLA A+ ++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G+DV
Sbjct: 14 LTLA---ARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQDHAEVQALKDARARGHDVA 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
STVY+TLEPCS+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L +GI V+
Sbjct: 71 GSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDSGIDVRC 130
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
GL+ EA E+NIGF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WR
Sbjct: 131 GLLANEAGELNIGFVSRMTRGRPWVRMKTAASLDARTALPSGESQWITGEAARLDGHAWR 190
Query: 181 ARSCAILTG 189
AR+CAILTG
Sbjct: 191 ARACAILTG 199
>gi|134095549|ref|YP_001100624.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal)/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Herminiimonas arsenicoxydans]
gi|133739452|emb|CAL62503.1| bifunctional riboflavin biosynthesis protein ribD [Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase)] [Herminiimonas arsenicoxydans]
Length = 363
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 146/190 (76%), Gaps = 1/190 (0%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
+ LAL+ A+ ++PNPRVGCVIVKE ++I GYT+ G HAE+ AL +AA +GYDV
Sbjct: 10 IRLALELAARGMFTTAPNPRVGCVIVKENQVIGSGYTQPAGHAHAEVQALNDAANKGYDV 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
STVY+TLEPCS+ G TPPC +ALI++ + +V+ AI DPNPLV+G+G+A+L +AGI V
Sbjct: 70 AGSTVYVTLEPCSHHGRTPPCADALIRARVARVVAAIADPNPLVAGQGLARLEAAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA EINIGF SRMQ G PWVRMK A+SLD T+L+N SQWIT E+R D H+W
Sbjct: 130 CGVLEAEAREINIGFLSRMQHGKPWVRMKSAASLDGMTALHNGISQWITGDEARADGHVW 189
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 190 RARACAILTG 199
>gi|423015554|ref|ZP_17006275.1| riboflavin biosynthesis protein RibD [Achromobacter xylosoxidans
AXX-A]
gi|338781453|gb|EGP45843.1| riboflavin biosynthesis protein RibD [Achromobacter xylosoxidans
AXX-A]
Length = 392
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL Q + +++PNPRVGCVIV++ R++ G T+ PGG HAE+ AL +A A+G V +
Sbjct: 24 LALAQTVM-YSTAPNPRVGCVIVRDGRVLGEGATQPPGGPHAEVCALRDAQARGESVAGA 82
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
TVY+TLEPCS+FG TPPC +AL+ + ++V++AI DPNPLV+GKG+A+L AGI+V G+
Sbjct: 83 TVYVTLEPCSHFGRTPPCVDALLAAAPERVVVAIGDPNPLVNGKGLARLREAGIAVTTGI 142
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
++EA +N GF SRM RG+PW +K+A+SLD +++L+N SQWIT E+R D H WRAR
Sbjct: 143 CREEALALNAGFISRMSRGLPWTWLKMAASLDGRSALHNGLSQWITGPEARADGHHWRAR 202
Query: 183 SCAILTG 189
SC +LTG
Sbjct: 203 SCVVLTG 209
>gi|167570902|ref|ZP_02363776.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis
C6786]
Length = 246
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 134/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIV+ +I G+T+ G +HAE+ AL +A A+G D+ ++TVY+TLEPCS
Sbjct: 23 TTTPNPRVGCVIVQNDVVIGEGFTQPAGQDHAEVQALKDARARGGDLRDATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLTHEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 199
>gi|416956593|ref|ZP_11935896.1| pyrimidine deaminase, partial [Burkholderia sp. TJI49]
gi|325522583|gb|EGD01124.1| pyrimidine deaminase [Burkholderia sp. TJI49]
Length = 221
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL A+ ++PNPRVGCVIVK +I GYT+ G +HAE+ AL +A A+G+DV S
Sbjct: 14 LALA-ARGMYTTTPNPRVGCVIVKGGDVIGEGYTQPAGHDHAEVQALKDARARGHDVAGS 72
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
TVY+TLEPCS+FG TPPC ALI++ + KV+ A+ DPNP VSG+G+ L AGI V+ GL
Sbjct: 73 TVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGL 132
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+ EA E+NIGF SRM RG PWVRMK A++LD +T+L + SQWIT +R D H WRAR
Sbjct: 133 LAHEAGELNIGFVSRMTRGRPWVRMKSAATLDGRTALPSGESQWITGDAARLDGHAWRAR 192
Query: 183 SCAILTG 189
+CAILTG
Sbjct: 193 ACAILTG 199
>gi|167563753|ref|ZP_02356669.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis
EO147]
Length = 369
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 133/177 (75%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIV+ +I G+T+ G +HAE+ AL +A +G D+ ++TVY+TLEPCS
Sbjct: 14 TTTPNPRVGCVIVQNDVVIGEGFTQPAGQDHAEVQALKDARTRGGDLRDATVYVTLEPCS 73
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+A L AGI V+ GL+ EA+E+NI
Sbjct: 74 HFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLTHEAHEMNI 133
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + S+WIT +R+D H WRAR+CAILTG
Sbjct: 134 GFVSRMTRGRPWVRMKTAASLDGRTALASGESKWITGDAARDDGHKWRARACAILTG 190
>gi|237747123|ref|ZP_04577603.1| riboflavin biosynthesis protein RibD [Oxalobacter formigenes
HOxBLS]
gi|229378474|gb|EEO28565.1| riboflavin biosynthesis protein RibD [Oxalobacter formigenes
HOxBLS]
Length = 374
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ S+ SPNP+VGCVIV+ I+ GYT+ G NHAEI+AL A ++G D
Sbjct: 20 MKRALELARNCSVLVSPNPKVGCVIVRNGHILGEGYTRPAGKNHAEIEALNEAVSRGEDC 79
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPC++FG TPPC +AL+++G+ +VI A+ DPNPLV+GKG+ +L +AGI V
Sbjct: 80 RGATVYVTLEPCAHFGRTPPCADALVRAGVSRVIAAMEDPNPLVAGKGLEKLKAAGIHVI 139
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ EA E+N GF SR++RG PWVRMK+A+SLD KT+L N SQWITS+++R D H W
Sbjct: 140 CGILADEAREMNRGFLSRVERGRPWVRMKVAASLDGKTALSNGESQWITSEKAREDGHRW 199
Query: 180 RARSCAILTG 189
R R+ AI+TG
Sbjct: 200 RMRADAIMTG 209
>gi|134294988|ref|YP_001118723.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Burkholderia vietnamiensis G4]
gi|134138145|gb|ABO53888.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Burkholderia vietnamiensis G4]
Length = 373
Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 132/177 (74%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G DV +TVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARARGCDVAGATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAYEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDARTALPSGESQWITGEAARLDGHAWRARACAILTG 199
>gi|387901607|ref|YP_006331946.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Burkholderia sp. KJ006]
gi|387576499|gb|AFJ85215.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Burkholderia sp. KJ006]
Length = 373
Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 132/177 (74%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIVK+ +I G+T+ G +HAE+ AL +A A+G DV +TVY+TLEPCS
Sbjct: 23 TTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARARGCDVAGATVYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + + KV+ A+ DPNP VSG+G+ L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAYEAGELNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVRMK A+SLD +T+L + SQWIT + +R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRGRPWVRMKTAASLDARTALPSGESQWITGEAARLDGHAWRARACAILTG 199
>gi|209517119|ref|ZP_03265966.1| riboflavin biosynthesis protein RibD [Burkholderia sp. H160]
gi|209502512|gb|EEA02521.1| riboflavin biosynthesis protein RibD [Burkholderia sp. H160]
Length = 383
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL AK + + PNPRVGCV+V+ +I GYT+ G +HAEI AL +A ++G+D+
Sbjct: 10 MERALALAKRGMYTTDPNPRVGCVLVRNGEVIGEGYTQPAGQDHAEIRALKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI++ I +VI A+ DPNP VSG+G+A L AGI V+
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCANALIEAQIGRVIAAMEDPNPQVSGRGLAMLREAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWITS +R D H W
Sbjct: 130 CGLLANEARELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGESQWITSAAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|187925073|ref|YP_001896715.1| riboflavin biosynthesis protein RibD [Burkholderia phytofirmans
PsJN]
gi|187716267|gb|ACD17491.1| riboflavin biosynthesis protein RibD [Burkholderia phytofirmans
PsJN]
Length = 383
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL AK + + PNPRVGCV+VK +I G+T+ G +HAEI AL +A ++G+D+
Sbjct: 10 MERALALAKRGMYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQDHAEIRALKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI++ + +V+ A+ DPNP VSG+G+A L AGI V+
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRGLAMLRDAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA+E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWIT + +R D H W
Sbjct: 130 CGLLAHEAHELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGDSQWITGEAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|295677354|ref|YP_003605878.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1002]
gi|295437197|gb|ADG16367.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1002]
Length = 383
Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL AK + + PNPRVGCV+V+ +I GYT+ G +HAEI AL +A ++G+D+
Sbjct: 10 MERALALAKRGMYTTDPNPRVGCVLVRNGEVIGEGYTQPAGQDHAEIRALKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI++ I +VI A+ DPNP VSG+G+A L AGI V+
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCANALIEAQIGRVIAAMEDPNPQVSGRGLAMLREAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWITS +R D H W
Sbjct: 130 CGLLANEARELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGESQWITSAAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|312797040|ref|YP_004029962.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Burkholderia rhizoxinica HKI 454]
gi|312168815|emb|CBW75818.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC
1.1.1.193) [Burkholderia rhizoxinica HKI 454]
Length = 382
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 132/177 (74%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNPRVGCV+VK+ +I G+T+ G +HAEI AL +A +G+ +T Y+TLEPCS
Sbjct: 23 TTSPNPRVGCVLVKDGEVIGEGFTQPAGQDHAEICALKDARLRGHTPAGATAYVTLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC LI++GI +VI A+ DPNP VSG+G+A L AG+ V+ GL+ EA E+N+
Sbjct: 83 HFGRTPPCANTLIEAGITRVIAAMEDPNPQVSGRGLASLRDAGVDVRCGLLAHEAQELNV 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG+PWVR+KIA++LD +T+L N SQWITS +R D H WRAR+CA LTG
Sbjct: 143 GFVSRMTRGVPWVRLKIAATLDGRTALPNGQSQWITSSAARTDGHAWRARACATLTG 199
>gi|264677184|ref|YP_003277090.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni CNB-2]
gi|262207696|gb|ACY31794.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni CNB-2]
Length = 369
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 140/191 (73%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M AL+QA ++ SSPNPRVGCVIV +RII G+T+ GG HAE+ AL +AAA+G D
Sbjct: 8 MNKALEQAAQALFLSSPNPRVGCVIVDASERIIGQGFTQQTGGPHAEVMALRDAAAKGND 67
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
V +T Y+TLEPCS+ G T PC +ALI +GI KV+ A+ DPNP V+G+G +L +AG+ V
Sbjct: 68 VRGATAYVTLEPCSHHGRTGPCCDALIAAGIGKVVGALTDPNPQVAGQGFERLRAAGVDV 127
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G E+ E+NIGFFSRM RGIPWVRMK ASSLD T+L+N SQWITS +R D H
Sbjct: 128 EIGPGGAESRELNIGFFSRMIRGIPWVRMKAASSLDGITALHNGQSQWITSAAARADGHA 187
Query: 179 WRARSCAILTG 189
WRAR+C ILTG
Sbjct: 188 WRARACTILTG 198
>gi|350545557|ref|ZP_08915029.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase uracil
reductase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526614|emb|CCD39889.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase uracil
reductase [Candidatus Burkholderia kirkii UZHbot1]
Length = 370
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 136/188 (72%), Gaps = 1/188 (0%)
Query: 2 TLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN 61
TLAL +K ++PNPRVGCV+VK +I G+T+ G +HAE+ AL +A ++G D
Sbjct: 13 TLALA-SKGMYTTTPNPRVGCVLVKNGEVIGMGFTQPAGQDHAEVRALKDARSRGKDPRG 71
Query: 62 STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQG 121
+T Y+TLEPCS+FG TPPC ALI + ++KVI A+ DPNP VSG+G+ L AGI V+ G
Sbjct: 72 ATAYVTLEPCSHFGRTPPCAHALIDARVEKVIAAMEDPNPAVSGRGLGMLRDAGIDVRCG 131
Query: 122 LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRA 181
L+ EA+E+NIGF SRM R PWVRMKIA++LD +T L SQWIT +++R D H WRA
Sbjct: 132 LLANEAHEMNIGFVSRMTRRRPWVRMKIAATLDGRTGLPTGESQWITGEDARADGHAWRA 191
Query: 182 RSCAILTG 189
R+CAILTG
Sbjct: 192 RACAILTG 199
>gi|186475387|ref|YP_001856857.1| riboflavin biosynthesis protein RibD [Burkholderia phymatum STM815]
gi|184191846|gb|ACC69811.1| riboflavin biosynthesis protein RibD [Burkholderia phymatum STM815]
Length = 373
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 133/176 (75%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
+ PNPRVGCV+VK +I G+T+ G +HAEI AL +A +G+D+ +T Y+TLEPCS+
Sbjct: 24 TDPNPRVGCVLVKNGEVIGEGFTQPAGRDHAEIQALKDARKRGHDLQGATAYVTLEPCSH 83
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC ALI++ + +V+ A+ DPNP VSG+G++ L AGI V+ GL++ +A E+NIG
Sbjct: 84 FGRTPPCANALIEAKLARVVAAMEDPNPRVSGRGLSMLREAGIEVRCGLLENDARELNIG 143
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F SRM RG PWVRMK+A+SLD +T L + SQWITS+ +RND H WRAR+ AILTG
Sbjct: 144 FVSRMTRGRPWVRMKVAASLDGRTGLPSGESQWITSEAARNDGHAWRARASAILTG 199
>gi|407714479|ref|YP_006835044.1| Riboflavin biosynthesis protein [Burkholderia phenoliruptrix
BR3459a]
gi|407236663|gb|AFT86862.1| Riboflavin biosynthesis protein [Burkholderia phenoliruptrix
BR3459a]
Length = 385
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL AK + + PNPRVGCVIV+ +I G+T+ G +HAEI A+ +A ++G+D+
Sbjct: 10 MERALALAKRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQDHAEIRAMKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC ALI++ + +V+ A+ DPNP VSG+G+A L AGI V+
Sbjct: 70 RGATVYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRGLAMLRDAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWIT + +R D H W
Sbjct: 130 CGLLANEAQELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGEAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|160900631|ref|YP_001566213.1| riboflavin biosynthesis protein RibD [Delftia acidovorans SPH-1]
gi|160366215|gb|ABX37828.1| riboflavin biosynthesis protein RibD [Delftia acidovorans SPH-1]
Length = 369
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 133/177 (75%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
SSPNPRVGCV+V + R++ G+T+ GG HAE+ AL +A A+G DV +T Y+TLEPCS
Sbjct: 22 SSPNPRVGCVLVAPDGRVVGQGFTQQAGGPHAEVMALRDAVARGEDVRGATAYVTLEPCS 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI +G+ KV+ A+ DPNP V+G+G A+L +AG+ V G E+ E+NI
Sbjct: 82 HQGRTGPCCDALIAAGVAKVVGALTDPNPQVAGQGFARLRAAGVDVVVGPGADESRELNI 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM RGIPWVRMK ASSLD T+L+N +SQWITS E+R D H WRAR+C +LTG
Sbjct: 142 GFFSRMLRGIPWVRMKAASSLDGATALHNGTSQWITSPEARADGHAWRARACTLLTG 198
>gi|332530146|ref|ZP_08406095.1| riboflavin biosynthesis protein RibD [Hylemonella gracilis ATCC
19624]
gi|332040416|gb|EGI76793.1| riboflavin biosynthesis protein RibD [Hylemonella gracilis ATCC
19624]
Length = 377
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 142/188 (75%), Gaps = 2/188 (1%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN 61
LAL + L + +SPNPRVGCVIV E +++ G+T+ GG HAE+ AL +A A+G+DV
Sbjct: 11 LALAEQGLYL-TSPNPRVGCVIVGVEGQLLGEGHTQRAGGPHAEVMALRDAQARGHDVRG 69
Query: 62 STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQG 121
+T Y+TLEPC++ G T PC EAL +GI KV+ ++ DPNP V+G+G A+L +AG+ V+ G
Sbjct: 70 ATAYVTLEPCAHQGRTGPCCEALAAAGIGKVVASLEDPNPKVAGQGFARLRAAGVVVEVG 129
Query: 122 LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRA 181
++ E+N+GFFSRMQRG+PWVRMKIA+SLD +T+L N SQWITS E+R D H WRA
Sbjct: 130 PGAAQSRELNLGFFSRMQRGLPWVRMKIAASLDGQTALQNGLSQWITSPEARADGHAWRA 189
Query: 182 RSCAILTG 189
R+CAILTG
Sbjct: 190 RACAILTG 197
>gi|377820157|ref|YP_004976528.1| Pyrimidine reductase [Burkholderia sp. YI23]
gi|357934992|gb|AET88551.1| Pyrimidine reductase [Burkholderia sp. YI23]
Length = 370
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 132/177 (74%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCV+VK +I G+T+ G +HAE+ AL +A ++G D +T Y++LEPCS
Sbjct: 23 TTTPNPRVGCVLVKNGEVIGMGFTQPAGQDHAEVQALKDARSRGKDPRGATAYVSLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPCT ALI + ++KVI A+ DPNP VSG+G+A L AGI V+ GL+ EA E+NI
Sbjct: 83 HFGRTPPCTHALIDARVEKVIAAMEDPNPAVSGRGLAMLRDAGIDVRCGLLANEAQEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM R PWVRMK+A++LD +T L + SQWIT +++R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRRRPWVRMKVAATLDGRTGLPSGESQWITGEDARADGHAWRARACAILTG 199
>gi|170693630|ref|ZP_02884788.1| riboflavin biosynthesis protein RibD [Burkholderia graminis C4D1M]
gi|170141412|gb|EDT09582.1| riboflavin biosynthesis protein RibD [Burkholderia graminis C4D1M]
Length = 385
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + + PNPRVGCVIVK +I G+T+ G +HAEI A+ +A ++G+D+
Sbjct: 10 MERALALARRGMYTTDPNPRVGCVIVKNGEVIGEGFTQPAGQDHAEIRAMKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI++ + +V+ A+ DPNP VSG+G+A L AGI V+
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRGLAILRDAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA+E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWIT + +R D H W
Sbjct: 130 CGLLANEAHELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGEAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|390573757|ref|ZP_10253920.1| riboflavin biosynthesis protein RibD [Burkholderia terrae BS001]
gi|389934270|gb|EIM96235.1| riboflavin biosynthesis protein RibD [Burkholderia terrae BS001]
Length = 373
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 130/176 (73%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
+ PNPRVGCV+VK +I GYT+ G +HAEI AL +A ++G D +T Y+TLEPCS+
Sbjct: 24 TDPNPRVGCVLVKNGEVIGEGYTQPAGHDHAEIQALKDARSRGNDTRGATAYVTLEPCSH 83
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC ALI++ + +V+ A+ DPNP VSG+G+ L AGI V+ GL++ EA E+NIG
Sbjct: 84 FGRTPPCANALIEAKVARVVAAMEDPNPRVSGRGLTMLRDAGIEVRCGLLETEARELNIG 143
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F SRM RG PWVRMK+A+SLD +T L + SQWIT + +RND H WRAR+ AILTG
Sbjct: 144 FVSRMMRGRPWVRMKVAASLDGRTGLPSGESQWITGEAARNDGHAWRARASAILTG 199
>gi|420256834|ref|ZP_14759651.1| riboflavin biosynthesis protein RibD [Burkholderia sp. BT03]
gi|398042472|gb|EJL35484.1| riboflavin biosynthesis protein RibD [Burkholderia sp. BT03]
Length = 373
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 130/176 (73%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
+ PNPRVGCV+VK +I GYT+ G +HAEI AL +A ++G D +T Y+TLEPCS+
Sbjct: 24 TDPNPRVGCVLVKNGEVIGEGYTQPAGHDHAEIQALKDARSRGNDTRGATAYVTLEPCSH 83
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC ALI++ + +V+ A+ DPNP VSG+G+ L AGI V+ GL++ EA E+NIG
Sbjct: 84 FGRTPPCANALIEAKVARVVAAMEDPNPRVSGRGLTMLRDAGIEVRCGLLETEARELNIG 143
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F SRM RG PWVRMK+A+SLD +T L + SQWIT + +RND H WRAR+ AILTG
Sbjct: 144 FVSRMMRGRPWVRMKVAASLDGRTGLPSGESQWITGEAARNDGHAWRARASAILTG 199
>gi|221068623|ref|ZP_03544728.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni KF-1]
gi|220713646|gb|EED69014.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni KF-1]
Length = 367
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 138/191 (72%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M AL+QA ++ SSPNPRVGCVIV RII G+T+ GG HAE+ AL +AAA+G D
Sbjct: 6 MNKALEQAAQALFLSSPNPRVGCVIVDASDRIIGQGFTQQAGGPHAEVMALRDAAAKGND 65
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
V +T Y+TLEPCS+ G T PC +ALI +GI KV+ A+ DPNP V+G+G +L +AG+ V
Sbjct: 66 VRGATAYVTLEPCSHHGRTGPCCDALIAAGIAKVVGALTDPNPQVAGQGFERLRAAGVDV 125
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G E+ E+NIGFFSRM RG PWVRMK ASSLD T+L+N SQWITS +R D H
Sbjct: 126 EIGPGAAESRELNIGFFSRMIRGTPWVRMKAASSLDGVTALHNGQSQWITSAAARADGHA 185
Query: 179 WRARSCAILTG 189
WRAR+C ILTG
Sbjct: 186 WRARACTILTG 196
>gi|385208456|ref|ZP_10035324.1| riboflavin biosynthesis protein RibD [Burkholderia sp. Ch1-1]
gi|385180794|gb|EIF30070.1| riboflavin biosynthesis protein RibD [Burkholderia sp. Ch1-1]
Length = 391
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + + PNPRVGCV+VK +I G+T+ G +HAEI AL +A ++G+D+
Sbjct: 10 MERALALARRGMYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQDHAEIRALKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI++ + V+ A+ DPNPLVSG+G+A L AGI V+
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCVNALIEAQVALVVAAMEDPNPLVSGRGLAILRDAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA+E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWIT + +R D H W
Sbjct: 130 CGLLANEAHELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGEAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|171463092|ref|YP_001797205.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192630|gb|ACB43591.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 372
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL +A+ ++ S+PNPRVGCVI KE +II G+T++ G HAE+ AL +A A+G D
Sbjct: 10 MSEALSEAQKALYLSNPNPRVGCVIAKEGKIIGRGFTQAAGKAHAEVQALADAKARGNDA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPCS+ G TPPC +ALI + KVI+A++DPNPLV+G+G+ +L AGI V+
Sbjct: 70 TGSTIYVTLEPCSHTGKTPPCVDALIAAKPSKVIVAMSDPNPLVAGQGLEKLKLAGIEVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ EA +N GF SRM RG+PWVRMKIA+SLD KT+L + SQWIT +R D H W
Sbjct: 130 YGLMESEAQLLNRGFVSRMTRGLPWVRMKIAASLDGKTALPDGRSQWITGPLARADGHHW 189
Query: 180 RARSCAILTG 189
RA++CAI+TG
Sbjct: 190 RAQACAIVTG 199
>gi|323527043|ref|YP_004229196.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1001]
gi|323384045|gb|ADX56136.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1001]
Length = 385
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL AK + + PNPRVGCVIV+ +I G+T+ G +HAEI A+ +A ++G+D+
Sbjct: 10 MERALALAKRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQDHAEIRAMKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC ALI++ + +V+ A+ DPNP VSG+G+A L AGI V+
Sbjct: 70 RGATVYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRGLAMLRDAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWIT + +R D H W
Sbjct: 130 CGLLANEAQELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGEAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|333913071|ref|YP_004486803.1| riboflavin biosynthesis protein RibD [Delftia sp. Cs1-4]
gi|333743271|gb|AEF88448.1| riboflavin biosynthesis protein RibD [Delftia sp. Cs1-4]
Length = 362
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVKE-KRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
SSPNPRVGCV+V R++ G+T+ GG HAE+ AL +A A+G DV +T Y+TLEPCS
Sbjct: 15 SSPNPRVGCVLVAPYGRVVGQGFTQQAGGPHAEVMALRDAVARGEDVRGATAYVTLEPCS 74
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI +G+ KV+ A+ DPNP V+G+G A+L +AG+ V G E+ E+NI
Sbjct: 75 HQGRTGPCCDALIAAGVAKVVGALTDPNPQVAGQGFARLRAAGVDVVVGPGADESRELNI 134
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM RGIPWVRMK ASSLD T+L+N +SQWITS E+R D H WRAR+C ILTG
Sbjct: 135 GFFSRMLRGIPWVRMKAASSLDGATALHNGTSQWITSPEARADGHAWRARACTILTG 191
>gi|307730708|ref|YP_003907932.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1003]
gi|307585243|gb|ADN58641.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1003]
Length = 384
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + + PNPRVGCVIV+ +I G+T+ G +HAEI A+ +A ++G+D+
Sbjct: 10 MERALALARRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQDHAEIRAMKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI++ + +V+ A+ DPNP VSG+G+A L AGI V+
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCASALIEAQVGRVVAAMEDPNPQVSGRGLAMLRDAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA+E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWIT + +R D H W
Sbjct: 130 CGLLANEAHELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGEAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|237749273|ref|ZP_04579753.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oxalobacter
formigenes OXCC13]
gi|229380635|gb|EEO30726.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oxalobacter
formigenes OXCC13]
Length = 363
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K S+ +SPNPRVGCVIV++ II G+T+ GGNHAE++AL + A +G D
Sbjct: 8 MRRALELARKCSVLTSPNPRVGCVIVRDGEIIGEGFTQPVGGNHAEVEALNDVAKRGQDC 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +ALI++ +K+V+ AI DPN V+GKG+A+L +AGI V
Sbjct: 68 RGATVYVTLEPCSHRGRTPPCADALIRANVKRVVAAIEDPNVQVAGKGLAKLKAAGIEVL 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ EA E+N GF SR + G PWVRMK+A+SLD KT+L N SQWITS+ +R D H W
Sbjct: 128 CGVLPDEARELNRGFLSRFEHGRPWVRMKVAASLDGKTALTNGESQWITSEAARRDGHEW 187
Query: 180 RARSCAILTG 189
R R+ AI+TG
Sbjct: 188 RMRADAIMTG 197
>gi|418530564|ref|ZP_13096487.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni ATCC
11996]
gi|371452283|gb|EHN65312.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni ATCC
11996]
Length = 369
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 139/191 (72%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M AL+QA ++ SSPNPRVGCVIV +RII G+T+ GG HAE+ AL +AAA+G D
Sbjct: 8 MNKALEQAAQALFLSSPNPRVGCVIVDASERIIGQGFTQQAGGPHAEVMALRDAAAKGND 67
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
V +T Y+TLEPCS+ G T PC +ALI +GI KV+ A+ DPNP V+G+G +L +AG++V
Sbjct: 68 VRGATAYVTLEPCSHHGRTGPCCDALIAAGIGKVVGALTDPNPQVAGQGFERLRAAGVNV 127
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G E+ E NIGFFSRM RG PWVRMK ASSLD T+L+N SQWITS +R D H
Sbjct: 128 EIGPGGTESREFNIGFFSRMIRGTPWVRMKAASSLDGVTALHNGQSQWITSAAARADGHA 187
Query: 179 WRARSCAILTG 189
WRAR+C ILTG
Sbjct: 188 WRARACTILTG 198
>gi|121605806|ref|YP_983135.1| riboflavin biosynthesis protein RibD [Polaromonas naphthalenivorans
CJ2]
gi|120594775|gb|ABM38214.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polaromonas
naphthalenivorans CJ2]
Length = 370
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
+AL A + I +SPNPRVGCV+ ++ G+T++ G HAEI AL +AAAQG+ V +
Sbjct: 15 VALALAAMRI-TSPNPRVGCVLTSSGDVLGQGHTQAAGHPHAEIMALRDAAAQGHSVVGA 73
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS+ G T PC +ALI +GIKK++ +I DPNPLVSG+G +L +AGI V+ G
Sbjct: 74 TAYVTLEPCSHHGRTGPCCDALIAAGIKKIVASIADPNPLVSGQGFERLRAAGIEVEVGP 133
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
E+ E+NIGFFSRM R PWVRMK+A+SLD T+L N SQWITS E+R D H WRAR
Sbjct: 134 GAAESRELNIGFFSRMIRKTPWVRMKMAASLDGTTALANGQSQWITSAEARADGHAWRAR 193
Query: 183 SCAILTG 189
+CA+LTG
Sbjct: 194 ACAVLTG 200
>gi|91784896|ref|YP_560102.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia
xenovorans LB400]
gi|91688850|gb|ABE32050.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Burkholderia xenovorans LB400]
Length = 389
Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + + PNPRVGCV+VK +I G+T+ G +HAEI AL +A ++G+D+
Sbjct: 10 MERALALARRGMYTTDPNPRVGCVLVKNGAVIGEGFTQPAGQDHAEIRALKDARSRGHDL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI++ + V+ A+ DPNPLVSG+G+A L AGI V+
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCVNALIEAQVALVVAAMEDPNPLVSGRGLAILRDAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA+E+NIGF SRM RG PWVRMK+A+SLD +T L + SQWIT + +R D H W
Sbjct: 130 CGLLANEAHELNIGFVSRMTRGRPWVRMKVAASLDGRTGLPSGVSQWITGEAARADGHAW 189
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 190 RARASAILTG 199
>gi|456062605|ref|YP_007501575.1| riboflavin biosynthesis protein RibD [beta proteobacterium CB]
gi|455439902|gb|AGG32840.1| riboflavin biosynthesis protein RibD [beta proteobacterium CB]
Length = 371
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL +A+ ++ S+PNPRVGCVIVK+ ++I G+T+ GG HAE+ AL + A+G D
Sbjct: 10 MSEALAEAQKALYLSNPNPRVGCVIVKDGQVIGRGHTQRVGGPHAEVQALADVKAKGLDP 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
STVY+TLEPC++ G TPPC +ALI++ VI+A++DPNPLV GKG+ +L +AGI V+
Sbjct: 70 AGSTVYVTLEPCNHTGRTPPCVDALIEARPAMVIVAMSDPNPLVGGKGLERLKAAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF SRM RG+PWVRMKIA+SLD KT+L N SQWIT +R D H W
Sbjct: 130 CGLLEAEAKVLNRGFISRMTRGLPWVRMKIAASLDGKTALPNGQSQWITGPLARADGHHW 189
Query: 180 RARSCAILTG 189
RA++CAILTG
Sbjct: 190 RAQACAILTG 199
>gi|359798000|ref|ZP_09300578.1| riboflavin biosynthesis protein RibD [Achromobacter arsenitoxydans
SY8]
gi|359364012|gb|EHK65731.1| riboflavin biosynthesis protein RibD [Achromobacter arsenitoxydans
SY8]
Length = 393
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL Q + ++PNPRVGCVIV++ R++ G T+ PGG HAE+ AL + A+G +
Sbjct: 27 LALAQTVMC-TTAPNPRVGCVIVRDGRVLGEGATQPPGGPHAEVCALRDVQARGESAAGA 85
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T+Y+TLEPCS+FG TPPC +A++ + +V++A+ DPNPLV+G+G+A+L +AGI+V G+
Sbjct: 86 TLYVTLEPCSHFGRTPPCVDAVLAARPARVVVAMGDPNPLVNGQGLARLRAAGIAVTTGV 145
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
++EA +N GF SRM RG+PWV MK+A+SLD +++L+N SQWIT E+R D H WRAR
Sbjct: 146 CREEALAVNAGFISRMSRGLPWVWMKMAASLDGRSALHNGMSQWITGPEARADGHRWRAR 205
Query: 183 SCAILTG 189
SC +LTG
Sbjct: 206 SCVVLTG 212
>gi|299530728|ref|ZP_07044143.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni S44]
gi|298721244|gb|EFI62186.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni S44]
Length = 362
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 138/191 (72%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M AL+QA ++ SSPNPRVGCVIV RII G+T+ GG HAE+ AL +A+A+G D
Sbjct: 1 MNKALEQAAQALFLSSPNPRVGCVIVDASDRIIGQGFTQQAGGPHAEVMALRDASAKGND 60
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
V +T Y+TLEPCS+ G T PC +ALI +GI KV+ A+ DPNP V+G+G +L +AG+ V
Sbjct: 61 VRGATAYVTLEPCSHHGRTGPCCDALIAAGIGKVVGALTDPNPQVAGQGFERLRAAGVDV 120
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G E+ E+NIGFFSRM RG PWVRMK ASSLD T+L+N SQWITS +R D H
Sbjct: 121 EIGPGGAESRELNIGFFSRMIRGTPWVRMKAASSLDGVTALHNGQSQWITSAAARADGHA 180
Query: 179 WRARSCAILTG 189
WRAR+C ILTG
Sbjct: 181 WRARACTILTG 191
>gi|330815405|ref|YP_004359110.1| deaminase [Burkholderia gladioli BSR3]
gi|327367798|gb|AEA59154.1| Putative deaminase [Burkholderia gladioli BSR3]
Length = 384
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + ++PNPRVGCVIVK +I GYT+ G +HAE+ A+ +A A+G+++
Sbjct: 24 MARALELAARGLYTTTPNPRVGCVIVKHGILIGEGYTQPAGHDHAEVRAMKDARARGHEL 83
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC + L+++GI V+ A+ DPNP VSG+G A L AGI V+
Sbjct: 84 RGATAYVTLEPCSHYGRTPPCAKGLVEAGIATVVAAMEDPNPQVSGRGYAMLREAGIEVR 143
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++EA E+NIGF SRM R PWVRMK+A+SLD +++L +SQWIT +R D H W
Sbjct: 144 GGVLEEEARELNIGFVSRMTRARPWVRMKMAASLDGRSALPGGASQWITGAAARADGHAW 203
Query: 180 RARSCAILTG 189
RAR+C+ILTG
Sbjct: 204 RARACSILTG 213
>gi|413963252|ref|ZP_11402479.1| Pyrimidine reductase [Burkholderia sp. SJ98]
gi|413929084|gb|EKS68372.1| Pyrimidine reductase [Burkholderia sp. SJ98]
Length = 370
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 130/177 (73%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCV+VK +I GYT+ G +HAE+ AL +A ++G D +T Y++LEPCS
Sbjct: 23 TTTPNPRVGCVLVKNGEVIGMGYTQPAGQDHAEVQALKDARSRGKDPRGATAYVSLEPCS 82
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC ALI + ++KVI A+ DPNP VSG+G+ L AGI V+ GL+ EA+E+NI
Sbjct: 83 HFGRTPPCAHALIDARVEKVIAAMEDPNPSVSGRGLTMLRDAGIDVRCGLLANEAHEMNI 142
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM R PWVRMK+A++LD +T L SQWIT +++R D H WRAR+CAILTG
Sbjct: 143 GFVSRMTRRRPWVRMKVAATLDGRTGLPTGESQWITGEDARADGHAWRARACAILTG 199
>gi|238024083|ref|YP_002908315.1| riboflavin biosynthesis protein RibD [Burkholderia glumae BGR1]
gi|55509025|gb|AAV52810.1| putative deaminase [Burkholderia glumae BGR1]
gi|148562469|gb|ABQ88346.1| putative deaminase [Burkholderia glumae]
gi|237878748|gb|ACR31080.1| riboflavin biosynthesis protein RibD [Burkholderia glumae BGR1]
Length = 384
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + ++PNPRVGCVIVK +I GYT+ G +HAE+ A+ +A ++G+++
Sbjct: 24 MAKALELAARGLYTTTPNPRVGCVIVKHGMLIGEGYTQPAGHDHAEVRAMKDARSRGHEL 83
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC + L+++GI V+ A+ DPNP VSG+G A L AGI V+
Sbjct: 84 RGATAYVTLEPCSHYGRTPPCAKGLVEAGIATVVAAMEDPNPQVSGRGYAMLREAGIEVR 143
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF SRM R PWVRMK+A+SLD +++L + +SQWIT +R D H W
Sbjct: 144 GGVLEDEARELNIGFVSRMTRARPWVRMKMAASLDGRSALPDGASQWITGSAARADGHAW 203
Query: 180 RARSCAILTG 189
RAR+C+ILTG
Sbjct: 204 RARACSILTG 213
>gi|293603326|ref|ZP_06685754.1| riboflavin biosynthesis protein RibD [Achromobacter piechaudii ATCC
43553]
gi|292818236|gb|EFF77289.1| riboflavin biosynthesis protein RibD [Achromobacter piechaudii ATCC
43553]
Length = 383
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 141/188 (75%), Gaps = 1/188 (0%)
Query: 2 TLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN 61
LAL ++ L ++PNPRVGCVIV++ R++ G T+ PGG HAEI AL +A ++ V
Sbjct: 16 ALALAESVL-YTTAPNPRVGCVIVRDGRMLGEGATQPPGGPHAEIRALRDAESRQEAVEG 74
Query: 62 STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQG 121
+T+Y+TLEPCS+FG TPPC +A++ + +V++AI DPNPLV+G+G+A+L +AGI V G
Sbjct: 75 ATLYVTLEPCSHFGRTPPCVDAVLAARPARVVVAIGDPNPLVNGQGLARLRAAGIQVTTG 134
Query: 122 LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRA 181
+ ++EA +N GF SRM RG+PWV MK+A+SLD +++L+N SQWIT E+R D H WRA
Sbjct: 135 VCEQEALALNAGFISRMSRGLPWVWMKMAASLDGRSALHNGMSQWITGPEARADGHHWRA 194
Query: 182 RSCAILTG 189
RSC +LTG
Sbjct: 195 RSCVVLTG 202
>gi|71906245|ref|YP_283832.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Dechloromonas
aromatica RCB]
gi|71845866|gb|AAZ45362.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dechloromonas aromatica RCB]
Length = 367
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 136/190 (71%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + +SPNPRVGCV+V++ I+ G+ + G HAE+ AL +A G
Sbjct: 11 MARALQLAERGLWTTSPNPRVGCVLVRDGEIVGEGWHEKAGEPHAEVHALRSA---GERA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+ +V+ A+ DPNPLVSGKG+A L +AGI
Sbjct: 68 KGTTAYVTLEPCSHHGRTPPCAEALIAAGVSRVVAAMTDPNPLVSGKGLALLRAAGIETA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+NIGF SRM RG PW+R+K+A+SLD KT+L N SQWIT ++R D H W
Sbjct: 128 SGLLENEARELNIGFVSRMTRGRPWLRLKVAASLDGKTALNNGVSQWITGPDARRDGHAW 187
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 188 RARACAILTG 197
>gi|145588458|ref|YP_001155055.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145046864|gb|ABP33491.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 371
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL +A+ ++ ++PNPRVGCVIVK+ ++I G+T+ GG HAEI A+ +A A G D+
Sbjct: 10 MGEALGEAQKALYLANPNPRVGCVIVKDGQVIGRGHTQRVGGAHAEIQAIADAKANGKDI 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPCS+ G TPPC AL+ + KVI+++ DPNPLVSG G+A+L AGI V+
Sbjct: 70 AGSTIYVTLEPCSHTGRTPPCVNALVVARPAKVIVSMLDPNPLVSGGGLARLTDAGIEVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA IN GF SRM RG+PWVRMKIA+SLD KT+L N SQWIT +R D H W
Sbjct: 130 CGLLESEAQAINRGFISRMTRGLPWVRMKIAASLDGKTALPNGQSQWITGPLARADGHHW 189
Query: 180 RARSCAILTG 189
RA++CAI+TG
Sbjct: 190 RAQACAIVTG 199
>gi|422322496|ref|ZP_16403537.1| riboflavin biosynthesis protein ribd [Achromobacter xylosoxidans
C54]
gi|317402603|gb|EFV83165.1| riboflavin biosynthesis protein ribd [Achromobacter xylosoxidans
C54]
Length = 386
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL Q + +++PNPRVGCVIV++ R++ G T+ PGG HAE+ AL +A A+G V +
Sbjct: 18 LALAQTVM-YSTAPNPRVGCVIVRDGRVLGEGATQPPGGPHAEVCALRDAQARGESVAGA 76
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
TVY+TLEPCS+FG TPPC +AL+ + +V++AI DPNPLV+GKG+A+L AGI+V G+
Sbjct: 77 TVYVTLEPCSHFGRTPPCVDALLAAAPARVVVAIGDPNPLVNGKGLARLRQAGIAVTTGI 136
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
++EA +N GF SRM RG+PW +K+A+SLD +++L+N SQWIT E+R D H+WRAR
Sbjct: 137 CREEALALNAGFISRMSRGLPWTWLKMATSLDGRSALHNGLSQWITGPEARADGHLWRAR 196
Query: 183 SCAILTG 189
SC +LTG
Sbjct: 197 SCVVLTG 203
>gi|120612202|ref|YP_971880.1| riboflavin biosynthesis protein RibD [Acidovorax citrulli AAC00-1]
gi|120590666|gb|ABM34106.1| riboflavin biosynthesis protein RibD [Acidovorax citrulli AAC00-1]
Length = 377
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 141/191 (73%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKE-KRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M LALQ A+ + +SPNPRVGCV+V ++II G T+ GG HAE+ AL +A A+G+
Sbjct: 14 MQLALQLAEDGLYRTSPNPRVGCVLVNAGQQIIGQGSTQRAGGPHAEVMALRDARARGHA 73
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+ +T Y+TLEPCS+ G T PC +AL+++GI +V+ ++ DPNPLV+G+G +L AG+ V
Sbjct: 74 THGATAYVTLEPCSHHGRTGPCCDALVEAGIARVVASLADPNPLVAGQGFERLRGAGVQV 133
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G + E+NIGFFSRMQRG+PWVRMK A+SLD T+L + +SQWITS E+R D H
Sbjct: 134 EVGPGAAASRELNIGFFSRMQRGLPWVRMKAATSLDGFTALPDGTSQWITSPEARADGHA 193
Query: 179 WRARSCAILTG 189
WRAR+CA+LTG
Sbjct: 194 WRARACAVLTG 204
>gi|421485764|ref|ZP_15933319.1| riboflavin biosynthesis protein RibD [Achromobacter piechaudii HLE]
gi|400196076|gb|EJO29057.1| riboflavin biosynthesis protein RibD [Achromobacter piechaudii HLE]
Length = 383
Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Query: 2 TLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN 61
LAL + ++ ++PNPRVGCVIV++ R++ G T+ PGG HAEI AL +A + V
Sbjct: 16 ALALAE-RVLFTTAPNPRVGCVIVRDGRVLGEGATQPPGGPHAEICALRDAQHRNEPVEG 74
Query: 62 STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQG 121
+T+Y+TLEPCS+FG TPPC +A++ + +V++AI DPNPLV+G+G+A+L AGI V G
Sbjct: 75 ATMYVTLEPCSHFGRTPPCVDAVLAARPARVVVAIGDPNPLVNGQGLARLREAGIEVVTG 134
Query: 122 LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRA 181
+ +EA +N GF SRM RG+PWV MK+A+SLD +++L+N SQWIT E+R D H WRA
Sbjct: 135 VCAEEALAVNAGFISRMSRGLPWVWMKMAASLDGRSALHNGMSQWITGPEARADGHHWRA 194
Query: 182 RSCAILTG 189
RSC +LTG
Sbjct: 195 RSCVVLTG 202
>gi|291613122|ref|YP_003523279.1| riboflavin biosynthesis protein RibD [Sideroxydans lithotrophicus
ES-1]
gi|291583234|gb|ADE10892.1| riboflavin biosynthesis protein RibD [Sideroxydans lithotrophicus
ES-1]
Length = 363
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 138/190 (72%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL+ A+ + +SPNPRVGCV+VK+ ++ G+ + G HAE+ AL A G
Sbjct: 9 MALALRLAEQGLYTTSPNPRVGCVLVKQHEVVGTGWHERAGEPHAEVHAL---RAAGKSA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +GIK+V+ A+ DPNP V+G+G+A+L +AGI V+
Sbjct: 66 KGATAYVTLEPCSHHGRTPPCADALVAAGIKRVVAAMQDPNPQVAGQGIARLRAAGIGVE 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ A E+NIGF SRM RGIPWVR K+A+SLD +T+L N SS+WIT + +R D W
Sbjct: 126 CGLMEVAARELNIGFVSRMTRGIPWVRSKVAASLDGRTALANGSSKWITGEAARCDVQHW 185
Query: 180 RARSCAILTG 189
RARSCA+LTG
Sbjct: 186 RARSCAVLTG 195
>gi|311103895|ref|YP_003976748.1| riboflavin biosynthesis protein RibD [Achromobacter xylosoxidans
A8]
gi|310758584|gb|ADP14033.1| riboflavin biosynthesis protein RibD [Achromobacter xylosoxidans
A8]
Length = 383
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Query: 2 TLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN 61
LAL Q + +++PNPRVGCVIV++ R++ G T+ PGG HAE+ AL + A+G V
Sbjct: 16 ALALAQTVM-YSTAPNPRVGCVIVRDGRVLGEGATQPPGGPHAEVCALRDVQARGESVEG 74
Query: 62 STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQG 121
+T+Y+TLEPCS+FG TPPC +A++ + +V++AI DPNPLV+G+G+A+L AGI V G
Sbjct: 75 ATLYVTLEPCSHFGRTPPCVDAVLAARPARVVVAIGDPNPLVNGQGLARLRLAGIEVTTG 134
Query: 122 LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRA 181
+ EA +N GF SRM RG+PWV +K+A+SLD +++L+N SQWIT E+R D H WRA
Sbjct: 135 VCGAEALAVNAGFISRMSRGLPWVWLKMAASLDGRSALHNGVSQWITGPEARADGHRWRA 194
Query: 182 RSCAILTG 189
R+C +LTG
Sbjct: 195 RACVVLTG 202
>gi|171059615|ref|YP_001791964.1| riboflavin biosynthesis protein RibD [Leptothrix cholodnii SP-6]
gi|170777060|gb|ACB35199.1| riboflavin biosynthesis protein RibD [Leptothrix cholodnii SP-6]
Length = 416
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNPRVGCVIV + R++ G+T+ GG HAE+ A+ A A G+ + +T Y+TLEPC+
Sbjct: 43 TEPNPRVGCVIVDAQGRLLGSGHTQQAGGPHAEVMAMRTARAAGHSLIGATAYVTLEPCA 102
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC +ALI++G+K+V+ AI DP PLV+G+G+A+L +AGI V+QGLM + A INI
Sbjct: 103 HHGRTPPCADALIEAGLKRVVAAITDPFPLVAGQGLARLAAAGIQVEQGLMAEAATAINI 162
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSR+ R PWVRMK+A+SLD +T+L N SQWIT +R D H WR R+ A+LTG
Sbjct: 163 GFFSRVLRQRPWVRMKVAASLDGRTALMNGQSQWITGAAARADGHAWRRRASAVLTG 219
>gi|241763274|ref|ZP_04761331.1| riboflavin biosynthesis protein RibD [Acidovorax delafieldii 2AN]
gi|241367549|gb|EER61836.1| riboflavin biosynthesis protein RibD [Acidovorax delafieldii 2AN]
Length = 368
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
Query: 4 ALQQAKLSIN-SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN 61
AL+QA ++ S+PNPRVGCV+V + I+ G+T+ GG HAE+ AL +AA G DV
Sbjct: 11 ALRQAARALFISNPNPRVGCVLVDSDGTILGKGFTQQAGGPHAEVMALRDAATGGRDVRG 70
Query: 62 STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQG 121
+T Y+TLEPC++ G T PC++ALI +GI +V+ +I DPNPLV+G+G A+L +AG++V+ G
Sbjct: 71 ATAYVTLEPCAHQGRTGPCSDALISAGIGRVVASIEDPNPLVAGQGFARLRAAGVAVEVG 130
Query: 122 LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRA 181
E+ E+NIGFFSRM RG+PWVR K A+SLD T+L N +SQWITS +R D H WRA
Sbjct: 131 PGACESRELNIGFFSRMVRGVPWVRAKTAASLDGATALSNGASQWITSPAARADGHAWRA 190
Query: 182 RSCAILTG 189
R+CA+LTG
Sbjct: 191 RACAVLTG 198
>gi|222111713|ref|YP_002553977.1| riboflavin biosynthesis protein ribd [Acidovorax ebreus TPSY]
gi|221731157|gb|ACM33977.1| riboflavin biosynthesis protein RibD [Acidovorax ebreus TPSY]
Length = 370
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 134/177 (75%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
S+PNPRVGCVI + ++ G+T+ GG HAE+ AL +AAA+G DV +T Y+TLEPC+
Sbjct: 22 SNPNPRVGCVITSDAGAVLGQGFTQQAGGPHAEVMALRDAAARGNDVRGATAYVTLEPCA 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI++GI +V+ ++ DPNPLV+G+G A+L +AG++V+ G E E+NI
Sbjct: 82 HQGRTGPCCDALIQAGIARVVASVADPNPLVAGQGFARLRAAGVAVEAGPGAAETRELNI 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM RG+PWVRMK A+SLD T+L N +SQWITS +R D H WRAR+CA+L+G
Sbjct: 142 GFFSRMVRGMPWVRMKAAASLDGVTALGNGASQWITSPAARADGHAWRARACAVLSG 198
>gi|337279161|ref|YP_004618633.1| riboflavin biosynthesis bifunctional protein ribD :
Diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase) [Ramlibacter tataouinensis TTB310]
gi|334730238|gb|AEG92614.1| candidate riboflavin biosynthesis bifunctional protein ribD :
Diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase) [Ramlibacter tataouinensis TTB310]
Length = 385
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 139/192 (72%), Gaps = 5/192 (2%)
Query: 3 LALQQAKLSIN----SSPNPRVGCVI-VKEKRIISCGYTKSPGGNHAEIDALLNAAAQGY 57
LA Q +L+ S+PNPRVGC++ RI+ G+T+ GG HAE+ AL +AAA+G+
Sbjct: 24 LAFQALELARQALWLSNPNPRVGCILCAPAGRILGQGHTQQAGGPHAEVMALRDAAARGH 83
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
DV +T Y+TLEPCS+ G T PC +ALI++GI +V+ +I DPNPLVSG+G +L +AG+
Sbjct: 84 DVRGATAYVTLEPCSHHGRTGPCCDALIQAGIARVVASIADPNPLVSGRGFERLRAAGVQ 143
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ G + E+NIGFFSRM R PWVR+K+A+SLD T+L N +SQWITS+ +R D H
Sbjct: 144 VEVGAGAAGSRELNIGFFSRMVRQTPWVRLKVAASLDGTTALDNGASQWITSEAARTDGH 203
Query: 178 IWRARSCAILTG 189
WRAR+CA+LTG
Sbjct: 204 AWRARACAVLTG 215
>gi|398805988|ref|ZP_10564942.1| riboflavin biosynthesis protein RibD [Polaromonas sp. CF318]
gi|398090057|gb|EJL80549.1| riboflavin biosynthesis protein RibD [Polaromonas sp. CF318]
Length = 374
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
Query: 12 INSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEP 70
++SPNPR+GCV++ + I GYT+ GG HAE+ AL +AAA G+ + +T Y+TLEP
Sbjct: 26 FSASPNPRIGCVLISAAGQTIGTGYTQQAGGPHAEVMALRDAAAHGHATHGATAYVTLEP 85
Query: 71 CSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEI 130
CS+ G T PC +AL+ +GI+KV+ ++ DPNPLVSG+G +L +AG+ V G EA E+
Sbjct: 86 CSHHGRTGPCCDALVAAGIRKVVASMADPNPLVSGQGFERLRAAGVEVDVGAGAAEAREL 145
Query: 131 NIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
NIGFFSRM R PWVRMKIA+SLD T+L N SQWITS E+R D H WRAR+ A+LTG
Sbjct: 146 NIGFFSRMVRKTPWVRMKIAASLDGATALANGQSQWITSPEARADGHAWRARAGAVLTG 204
>gi|91788744|ref|YP_549696.1| 5-amino-6-(5-phosphoribosylamino)uracil
reductase/diaminohydroxyphosphoribosylaminopyrimidine
deaminase [Polaromonas sp. JS666]
gi|91697969|gb|ABE44798.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polaromonas sp.
JS666]
Length = 373
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 139/189 (73%), Gaps = 3/189 (1%)
Query: 4 ALQQAKLSI-NSSPNPRVGCVIV--KEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
AL+ A+ ++ S PNPRVGCVI ++R++ G T++ GG HAEI AL +AAA+ + V
Sbjct: 11 ALELARHAVGRSEPNPRVGCVIASADDQRVLGTGDTQAVGGAHAEIMALRDAAARRHVVA 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
+T Y+TLEPCS+ G T PC +ALI +GIKKV+ +I DPNPLVSG+G ++ +AGI V
Sbjct: 71 GATAYVTLEPCSHHGRTGPCCDALIAAGIKKVVASIADPNPLVSGQGFERMRAAGIEVVV 130
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
G E+ E+NIGFFSRM R PWVRMKIA+SLD KT+L N +SQWITS+ +R D H WR
Sbjct: 131 GPGAAESRELNIGFFSRMIRKTPWVRMKIAASLDGKTALDNGASQWITSEAARTDGHAWR 190
Query: 181 ARSCAILTG 189
AR+ AILTG
Sbjct: 191 ARASAILTG 199
>gi|319763925|ref|YP_004127862.1| riboflavin biosynthesis protein ribd [Alicycliphilus denitrificans
BC]
gi|317118486|gb|ADV00975.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans
BC]
Length = 370
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
S+PNPRVGCVI ++ G+T+ GG HAE+ AL +AAA G DV +T Y+TLEPC+
Sbjct: 22 SNPNPRVGCVIASGAGAVLGQGFTQQAGGPHAEVVALRDAAASGNDVRGATAYVTLEPCA 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI++GI +V+ +I DPNPLV G+G A+L +AGI V+ G +++ E+NI
Sbjct: 82 HQGRTGPCCDALIQAGIGRVVASIEDPNPLVGGQGFARLRAAGIDVQVGPGAQQSRELNI 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM RG+PWVRMK A+SLD T+L N +SQWIT+ +R D H WRAR+CA+LTG
Sbjct: 142 GFFSRMVRGMPWVRMKAAASLDGVTALANGTSQWITAPAARADGHAWRARACAVLTG 198
>gi|330823811|ref|YP_004387114.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans
K601]
gi|329309183|gb|AEB83598.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans
K601]
Length = 370
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
S+PNPRVGCVI ++ G+T+ GG HAE+ AL +AAA G DV +T Y+TLEPC+
Sbjct: 22 SNPNPRVGCVIASGAGAVLGQGFTQQAGGPHAEVVALRDAAASGNDVRGATAYVTLEPCA 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI++GI +V+ +I DPNPLV G+G A+L +AGI V+ G +++ E+NI
Sbjct: 82 HQGRTGPCCDALIQAGIGRVVASIEDPNPLVGGQGFARLRAAGIDVQVGPGAQQSRELNI 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM RG+PWVRMK A+SLD T+L N +SQWIT+ +R D H WRAR+CA+LTG
Sbjct: 142 GFFSRMVRGMPWVRMKAAASLDGVTALANGTSQWITAPAARADGHAWRARACAVLTG 198
>gi|365093670|ref|ZP_09330731.1| riboflavin biosynthesis protein RibD [Acidovorax sp. NO-1]
gi|363414154|gb|EHL21308.1| riboflavin biosynthesis protein RibD [Acidovorax sp. NO-1]
Length = 370
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 131/178 (73%), Gaps = 2/178 (1%)
Query: 14 SSPNPRVGCVIVKEK--RIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
S+PNPRVGCVIV +++ G+T+ GG HAE+ AL +AAA+G+DV +T Y+TLEPC
Sbjct: 22 SNPNPRVGCVIVAGDGLKVLGTGFTQHAGGAHAEVMALRDAAARGHDVRGATAYVTLEPC 81
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
++ G T PC +AL+++GI +V+ +I DPNPLV+G G +L +AG+ V G E+ +N
Sbjct: 82 AHQGRTGPCCDALVQAGIGRVVASITDPNPLVAGHGFERLRAAGVEVVVGPGADESRALN 141
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
IGFFSRM RG PWVR+K A+SLD T+L N SQWITS+ +R D H WRAR+CA+LTG
Sbjct: 142 IGFFSRMVRGTPWVRLKAAASLDGATALSNGVSQWITSRTARADGHAWRARACAVLTG 199
>gi|56475984|ref|YP_157573.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase oxidoreductase [Aromatoleum aromaticum EbN1]
gi|56312027|emb|CAI06672.1| riboflavin biosynthesis bifunctional RIBD:
diaminohydroxyphosphoribosylaminopyrimid ine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
oxidoreductase protein [Aromatoleum aromaticum EbN1]
Length = 366
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 135/190 (71%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + ++ PNPRVGCV++KE I+ G+ + G HAE+ AL A G
Sbjct: 11 MARALQLAERGLETTTPNPRVGCVLMKEGSIVGEGWHRRAGEPHAEVIAL---RAAGDTA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC +ALI +G+ +V+ A+ DPNPLV+G GV +L +AG++V
Sbjct: 68 RGATAYVTLEPCTHHGRTPPCADALIAAGVTRVVAAMEDPNPLVAGTGVGRLRAAGLAVT 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ +A+E+NIGF SRM RG PWVR+K AS+LD KT+L N SQWIT+ +R D H W
Sbjct: 128 TGLLASDAHELNIGFVSRMTRGRPWVRLKTASTLDGKTALNNGVSQWITADAARRDGHRW 187
Query: 180 RARSCAILTG 189
RAR+CA+LTG
Sbjct: 188 RARACAVLTG 197
>gi|296136861|ref|YP_003644103.1| riboflavin biosynthesis protein RibD [Thiomonas intermedia K12]
gi|295796983|gb|ADG31773.1| riboflavin biosynthesis protein RibD [Thiomonas intermedia K12]
Length = 366
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 130/177 (73%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNPRVGCV+V++ +++ G T + G +HAE+ A+ A +G++V +T Y+TLEPC+
Sbjct: 29 RTSPNPRVGCVLVRDGQVLGEGATLAAGQDHAEVQAVKQAWERGHEVRGATTYVTLEPCA 88
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC + L G+ +V+ A+ DPNPLV+G+G+ +L AGI V GL EA EIN+
Sbjct: 89 HHGRTPPCADLLATQGVARVVAALVDPNPLVAGQGLQRLRDAGIQVDVGLFADEAREINL 148
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVR+K+A+SLD T+L N +SQWITS+ +R D H WRAR+CA+LTG
Sbjct: 149 GFISRMVRGTPWVRLKVAASLDGVTALPNGASQWITSEAARADGHHWRARACAVLTG 205
>gi|395003988|ref|ZP_10388077.1| riboflavin biosynthesis protein RibD [Acidovorax sp. CF316]
gi|394318088|gb|EJE54558.1| riboflavin biosynthesis protein RibD [Acidovorax sp. CF316]
Length = 375
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
S+PNPRVGCVI + +++ G+T+ GG HAE+ AL +AAA+G V +T Y+TLEPCS
Sbjct: 28 SNPNPRVGCVITTPDGQVLGQGFTQQAGGPHAEVMALRDAAARGNGVQGATAYVTLEPCS 87
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI +GI KV+ ++ DPNPLVSG+G A+L +AG+ V G E+ E+NI
Sbjct: 88 HQGRTGPCCDALIGAGIGKVVASLADPNPLVSGQGFARLRAAGVEVVAGPGATESRELNI 147
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM RG PWVR+K A+SLD T+L N SQWITS +R D H WRAR+CA+LTG
Sbjct: 148 GFFSRMVRGTPWVRLKTAASLDGTTALANGQSQWITSPAARADGHAWRARACAVLTG 204
>gi|410694605|ref|YP_003625227.1| Riboflavin biosynthesis protein ribD [Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase)] [Thiomonas sp. 3As]
gi|294341030|emb|CAZ89425.1| Riboflavin biosynthesis protein ribD [Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase)] [Thiomonas sp. 3As]
Length = 387
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 130/177 (73%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNPRVGCV+V++ +++ G T + G +HAE+ A+ A +G++V +T Y+TLEPC+
Sbjct: 29 RTSPNPRVGCVLVRDGQVLGEGATLAAGQDHAEVQAVKQAWERGHEVRGATAYVTLEPCA 88
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC + L G+ +V+ A+ DPNPLV+G+G+ +L AGI V GL EA EIN+
Sbjct: 89 HHGRTPPCADLLATQGVARVVAALVDPNPLVAGQGLQRLRDAGIQVDVGLFADEAREINL 148
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVR+K+A+SLD T+L N +SQWITS+ +R D H WRAR+CA+LTG
Sbjct: 149 GFISRMVRGTPWVRLKVAASLDGVTALPNGTSQWITSEAARADGHHWRARACAVLTG 205
>gi|319794177|ref|YP_004155817.1| riboflavin biosynthesis protein ribd [Variovorax paradoxus EPS]
gi|315596640|gb|ADU37706.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus EPS]
Length = 375
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNPRVGCV+ E R++ G+T+ GG HAE+ AL +AAAQG+ V +T Y+TLEPCS
Sbjct: 25 TDPNPRVGCVLCDAEGRVLGQGHTQKAGGPHAEVMALRDAAAQGHSVEGATAYVTLEPCS 84
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI +GI++V+ ++ DPNPLV+G+G +L +AG+ V+ G E+ E+NI
Sbjct: 85 HHGRTGPCCDALIAAGIERVVASLADPNPLVAGQGFERLRAAGVEVEVGPGADESRELNI 144
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM R PWVR+K+A+SLD KT L N SQWITS+ +R D H WRAR+ A+LTG
Sbjct: 145 GFFSRMVRKTPWVRLKVAASLDGKTGLENGMSQWITSEPARADGHAWRARASAVLTG 201
>gi|82701141|ref|YP_410707.1| riboflavin biosynthesis protein RibD [Nitrosospira multiformis ATCC
25196]
gi|82409206|gb|ABB73315.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrosospira
multiformis ATCC 25196]
Length = 366
Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 138/190 (72%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + ++SPNPRVGCV+V++ +++ G+ + G HAEI+AL A
Sbjct: 10 MAQALRLAEKGLYSTSPNPRVGCVLVRDGQVVGTGWHERAGEAHAEINALAAAGPA---A 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS++G TPPC +AL+++G+ KVI A+ DPNPLV+G+G A L AGI VK
Sbjct: 67 RGALAYLTLEPCSHYGRTPPCADALVQAGVAKVITAMQDPNPLVAGRGCALLEEAGIEVK 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ EA +NIGF SRM RG PWVR+KIA+SLD KT+L N SSQWITS +R D H W
Sbjct: 127 TGLMEAEAKALNIGFVSRMTRGRPWVRVKIAASLDGKTALNNGSSQWITSAAARRDGHRW 186
Query: 180 RARSCAILTG 189
RARSCA++TG
Sbjct: 187 RARSCAVMTG 196
>gi|394989253|ref|ZP_10382087.1| hypothetical protein SCD_01672 [Sulfuricella denitrificans skB26]
gi|393791672|dbj|GAB71726.1| hypothetical protein SCD_01672 [Sulfuricella denitrificans skB26]
Length = 362
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 139/192 (72%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A+ + ++PNPRVGCVIV++ +++ G+ G HAEI+AL+ A AQG
Sbjct: 10 MAQALRLAEKGLYTTTPNPRVGCVIVRDGKVVGSGWHARAGEPHAEINALMQAGDLAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+TVY+TLEPCS+ G TPPC ALI++G+ +V++A+ DPNP V G+G+ QL AGI
Sbjct: 69 ----ATVYVTLEPCSHHGRTPPCAGALIQAGVGRVVVAMVDPNPQVEGEGITQLQQAGIQ 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
GL++KEA+++NIGF SRM G PW+R+KIA+SLD KT+L N SQWIT ++R D+H
Sbjct: 125 TDIGLLEKEAHDLNIGFVSRMTSGRPWLRLKIAASLDGKTALNNGVSQWITGADARRDAH 184
Query: 178 IWRARSCAILTG 189
RARSCA+LTG
Sbjct: 185 RLRARSCAVLTG 196
>gi|121595493|ref|YP_987389.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Acidovorax sp. JS42]
gi|120607573|gb|ABM43313.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Acidovorax sp. JS42]
Length = 366
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 14 SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
S+PNPRVGCVI ++ G+T+ G +HAE+ AL +AAA+G DV +T Y+TLEPC+
Sbjct: 18 SNPNPRVGCVITDVNGNMLGQGFTQRAGASHAEVMALRDAAARGCDVRGATAYVTLEPCA 77
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI++GI V+ +I DPNPLV+G+G A+L +AG+ V+ G ++ E+NI
Sbjct: 78 HQGRTGPCCDALIQAGIAHVVASIADPNPLVAGQGFARLRAAGVQVEVGPGGTQSRELNI 137
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM RGIPWVRMK A+SLD T+L N +SQWITS +R D H WRAR+CA+LTG
Sbjct: 138 GFFSRMVRGIPWVRMKAAASLDGVTALANGTSQWITSPAARADGHAWRARACAVLTG 194
>gi|389871295|ref|YP_006378714.1| riboflavin-specific deaminase [Advenella kashmirensis WT001]
gi|388536544|gb|AFK61732.1| riboflavin-specific deaminase [Advenella kashmirensis WT001]
Length = 378
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + ++SPNPRVGCVIV + RI+ G T+ PGG HAE+ A+ +A A+G+ +
Sbjct: 7 MDRALALARSVMFSTSPNPRVGCVIVNQDRILGEGATQPPGGPHAEVCAIRDAQAKGHAL 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST Y+TLEPCS++G TPPC +AL+ +V++A DPNPLVSG G+ +L AGI+V+
Sbjct: 67 AGSTFYVTLEPCSHYGRTPPCVDALLAVKPARVVVAATDPNPLVSGAGIEKLQDAGITVE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL ++A EIN GF SRM PWVR+KIASSLD K +L N SQWIT ++R D H W
Sbjct: 127 IGLGLEQALEINPGFVSRMSIQRPWVRVKIASSLDGKVALNNGRSQWITGGQARADGHHW 186
Query: 180 RARSCAILTG 189
RAR+C ILTG
Sbjct: 187 RARACVILTG 196
>gi|119899093|ref|YP_934306.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Azoarcus sp. BH72]
gi|119671506|emb|CAL95419.1| AMP deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Azoarcus sp. BH72]
Length = 363
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 130/177 (73%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCV+V++ I+ G+ + G HAE+ AL A + +T Y+TLEPCS
Sbjct: 24 TTTPNPRVGCVLVRDGEIVGEGWHQRAGEAHAEVHALRAAGER---AAGATAYVTLEPCS 80
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC EAL+ +G+++V+ A+ DPNPLV+G G+A+L +AGI GL++ EA E+NI
Sbjct: 81 HFGRTPPCCEALVAAGVRRVVAAMEDPNPLVAGSGLARLRAAGIDTAHGLLESEARELNI 140
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM RG PWVR+K A++LD KT+L N SQWIT + +R+D H WRAR+CAILTG
Sbjct: 141 GFISRMTRGRPWVRLKAAATLDGKTALANGVSQWITGEAARSDGHRWRARACAILTG 197
>gi|121609770|ref|YP_997577.1| riboflavin biosynthesis protein RibD [Verminephrobacter eiseniae
EF01-2]
gi|121554410|gb|ABM58559.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Verminephrobacter eiseniae EF01-2]
Length = 371
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 13 NSSPNPRVGCVIVKEKRI-ISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNPRVGCVI + I G T GG HAEI AL NAAA G+ V +T Y+TLEPC
Sbjct: 22 RTSPNPRVGCVIADAAGVVIGRGSTGPAGGAHAEIMALRNAAAGGHSVRGATAYVTLEPC 81
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G T PC +AL+ +GI KV+ ++ DPNPLV+G+G A+L +AG++V+ G + A E+N
Sbjct: 82 SHHGRTGPCCDALVAAGIAKVVASLTDPNPLVAGQGFARLRAAGVAVQVGPGAQAARELN 141
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
+GFFSRM R PWVRMK+A+SLD T+L + SSQWIT +R D H WRAR+CA+LTG
Sbjct: 142 VGFFSRMLRHRPWVRMKLAASLDGVTALADGSSQWITGPAARADGHAWRARACALLTG 199
>gi|302879548|ref|YP_003848112.1| riboflavin biosynthesis protein RibD [Gallionella capsiferriformans
ES-2]
gi|302582337|gb|ADL56348.1| riboflavin biosynthesis protein RibD [Gallionella capsiferriformans
ES-2]
Length = 366
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 138/192 (71%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + ++SPNPRVGCV+V++ ++ G+ K G HAE+ ALL+A G
Sbjct: 10 MAQALQLAERGLYSTSPNPRVGCVLVRDGNLLGAGWHKKAGEPHAEVYALLDA---GDAA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T Y+TLEPCS++G TPPC +ALI +G+ +V++A+ DPNP V+G+G+A+L +AGISV
Sbjct: 67 HGATAYVTLEPCSHYGRTPPCCDALIHAGVARVVVAMQDPNPQVAGRGIAKLRAAGISVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ A E+N GF +RM RG+P VR K+ SLD +T+L N SQWIT ++R D W
Sbjct: 127 CGLMEAAARELNAGFCARMTRGLPQVRSKVGMSLDGRTALSNGVSQWITGADARLDVQHW 186
Query: 180 RARSCAILTGKN 191
RARSCA+LTG N
Sbjct: 187 RARSCAVLTGIN 198
>gi|163854921|ref|YP_001629219.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Bordetella petrii DSM 12804]
gi|163258649|emb|CAP40948.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Bordetella petrii]
Length = 380
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + ++PNPRVGCVIV++ R++ G T+ PGG HAEI AL +AAA+G V
Sbjct: 13 MRRALALARTVMYTTTPNPRVGCVIVRDGRVLGEGATQPPGGPHAEICALRDAAARGESV 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPCS++G TPPC +A+ +G +V++A+ DPNP V G+G+A+L +AGI+V
Sbjct: 73 QGATLYVTLEPCSHYGRTPPCADAVAAAGPARVVVAMGDPNPQVRGQGLARLRAAGIAVT 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+ EA EIN GF +RM RGIPW +K+A+SLD +++L+N SQWIT + +R D H W
Sbjct: 133 SNVCLDEALEINAGFVARMSRGIPWAWVKMAASLDGRSALHNGVSQWITGEAARADGHAW 192
Query: 180 RARSCAILTG 189
RARSC +LTG
Sbjct: 193 RARSCVVLTG 202
>gi|331001110|ref|ZP_08324741.1| riboflavin biosynthesis protein RibD [Parasutterella
excrementihominis YIT 11859]
gi|329569415|gb|EGG51193.1| riboflavin biosynthesis protein RibD [Parasutterella
excrementihominis YIT 11859]
Length = 355
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 133/190 (70%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AK + N PNP VGCVIVK++RII G+T+ G HAE+ AL +AA++G V
Sbjct: 1 MRRALELAKKARFNCPPNPAVGCVIVKDRRIIGEGFTQKTGEAHAEVMALRDAASRGESV 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS++G TPPC AL + + +V+ A+ DPNPLV+GKG+ L AG+ V+
Sbjct: 61 AGATVYVTLEPCSHYGRTPPCALALKNAKVARVVAALKDPNPLVAGKGLKMLEEAGVKVE 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL +EA EIN GF R + G+PWVR K+A S+D T+L N SQWITS+E+R D H W
Sbjct: 121 CGLEAEEAEEINRGFLKRQREGMPWVRTKMAMSVDGNTALANGKSQWITSEEARADGHFW 180
Query: 180 RARSCAILTG 189
R S A+LTG
Sbjct: 181 RGISGAVLTG 190
>gi|451936682|ref|YP_007460536.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777605|gb|AGF48580.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 383
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 1/190 (0%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K S N++PNP VGC+IVK+ + I G T++ GG HAE+ AL+++ ++V
Sbjct: 14 MREALKLADKASYNTAPNPSVGCIIVKDGKCIGMGATRAAGGFHAEVCALIDSKKNNHNV 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST YITLEPCS++G TPPC + +IKS +V++++ DPNPLVSG G+ +L S+GI V
Sbjct: 74 VGSTFYITLEPCSHYGKTPPCVDQIIKSSPIRVVLSMIDPNPLVSGNGIKKLRSSGIDVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ KEA +NIGFF RM PWVR+K ASS+D +T+LYN+ S+WIT ESR D H W
Sbjct: 134 IGVCHKEALLLNIGFFHRMIYSTPWVRLKTASSIDGRTALYNHKSKWITCDESRKDGHHW 193
Query: 180 RARSCAILTG 189
RARS ILTG
Sbjct: 194 RARSSVILTG 203
>gi|303258272|ref|ZP_07344279.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium
1_1_47]
gi|302859025|gb|EFL82109.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium
1_1_47]
Length = 363
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 133/190 (70%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AK + N PNP VGCVIVK++RII G+T+ G HAE+ AL +AA++G V
Sbjct: 9 MRRALELAKKARFNCPPNPAVGCVIVKDRRIIGEGFTQKTGEAHAEVMALRDAASRGESV 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS++G TPPC AL + + +V+ A+ DPNPLV+GKG+ L AG+ V+
Sbjct: 69 EGATVYVTLEPCSHYGRTPPCALALKNAKVARVVAALKDPNPLVAGKGLKMLEEAGVKVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL +EA EIN GF R + G+PWVR K+A S+D T+L N SQWITS+E+R D H W
Sbjct: 129 CGLEAEEAEEINRGFLKRQREGMPWVRTKMAMSVDGNTALANGKSQWITSEEARADGHFW 188
Query: 180 RARSCAILTG 189
R S A+LTG
Sbjct: 189 RGISGAVLTG 198
>gi|399114815|emb|CCG17611.1| riboflavin biosynthesis protein RibD [Taylorella equigenitalis
14/56]
Length = 387
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 133/192 (69%), Gaps = 3/192 (1%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYD- 58
M LA + + K PNP VGCVIV II G T+ G +HAEI AL +A +G++
Sbjct: 9 MRLAYEASLKTRFLPDPNPCVGCVIVHNDEIIGEGATQIAGSHHAEIMALKDARMRGHED 68
Query: 59 -VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+ ++ +Y+TLEPCS+FG TPPCT+ALI +GIK V+IA DPNP+V G G+ L S GI
Sbjct: 69 LIADAILYVTLEPCSHFGRTPPCTDALISNGIKHVVIASPDPNPIVGGNGIRILRSNGIK 128
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ G M +E E+N+GFFSRM RG PWVR KIASSLD + SL N S+WIT +ESRND H
Sbjct: 129 VEVGFMLEEVLELNLGFFSRMIRGTPWVRTKIASSLDGRISLTNGQSKWITCEESRNDGH 188
Query: 178 IWRARSCAILTG 189
WRARS +LTG
Sbjct: 189 YWRARSSIVLTG 200
>gi|319778563|ref|YP_004129476.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella
equigenitalis MCE9]
gi|317108587|gb|ADU91333.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella
equigenitalis MCE9]
Length = 379
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 133/192 (69%), Gaps = 3/192 (1%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYD- 58
M LA + + K PNP VGCVIV II G T+ G +HAEI AL +A +G++
Sbjct: 1 MRLAYEASLKTRFLPDPNPCVGCVIVHNDEIIGEGATQIAGSHHAEIMALKDARMRGHED 60
Query: 59 -VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+ ++ +Y+TLEPCS+FG TPPCT+ALI +GIK V+IA DPNP+V G G+ L S GI
Sbjct: 61 LIADAILYVTLEPCSHFGRTPPCTDALISNGIKHVVIASPDPNPIVGGNGIRILRSNGIK 120
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ G M +E E+N+GFFSRM RG PWVR KIASSLD + SL N S+WIT +ESRND H
Sbjct: 121 VEVGFMLEEVLELNLGFFSRMIRGTPWVRTKIASSLDGRISLTNGQSKWITCEESRNDGH 180
Query: 178 IWRARSCAILTG 189
WRARS +LTG
Sbjct: 181 YWRARSSIVLTG 192
>gi|397662335|ref|YP_006503035.1| riboflavin biosynthesis protein RibD [Taylorella equigenitalis ATCC
35865]
gi|394350514|gb|AFN36428.1| riboflavin biosynthesis protein RibD [Taylorella equigenitalis ATCC
35865]
Length = 387
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 133/192 (69%), Gaps = 3/192 (1%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYD- 58
M LA + + K PNP VGCVIV II G T+ G +HAEI AL +A +G++
Sbjct: 9 MRLAYEASLKTRFLPDPNPCVGCVIVHNDEIIGEGATQIAGSHHAEIMALKDARMRGHED 68
Query: 59 -VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+ ++ +Y+TLEPCS+FG TPPCT+ALI +GIK V+IA DPNP+V G G+ L S GI
Sbjct: 69 LIADAILYVTLEPCSHFGRTPPCTDALISNGIKHVVIASPDPNPIVGGNGIRILRSNGIK 128
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ G M +E E+N+GFFSRM RG PWVR KIASSLD + SL N S+WIT +ESRND H
Sbjct: 129 VEVGFMLEEVLELNLGFFSRMIRGTPWVRTKIASSLDGRISLTNGQSKWITCEESRNDGH 188
Query: 178 IWRARSCAILTG 189
WRARS +LTG
Sbjct: 189 YWRARSSIVLTG 200
>gi|398812226|ref|ZP_10570998.1| riboflavin biosynthesis protein RibD [Variovorax sp. CF313]
gi|398078590|gb|EJL69486.1| riboflavin biosynthesis protein RibD [Variovorax sp. CF313]
Length = 371
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 136/191 (71%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKR-IISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M AL A+ + + PNPRVGCV+V +I GYT+ GG+HAE+ AL +AAA+G+
Sbjct: 7 MAHALDLARQAGPETDPNPRVGCVLVDANGGVIGQGYTQRVGGSHAEVMALSDAAARGHS 66
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
V +T ++TLEPC++ G T PC +AL+ +GI +V+ ++ DPNPLV+G+G +L +AG+ V
Sbjct: 67 VAGATAWVTLEPCAHHGRTGPCCDALVAAGIGRVVASLADPNPLVAGQGFERLRAAGVEV 126
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G EA E+NIGFFSRM R PWVR+K A+SLD KT L+N SQWITS+ +R D H
Sbjct: 127 EVGPGAAEARELNIGFFSRMVRKTPWVRLKAAASLDGKTGLHNGVSQWITSEPARADGHA 186
Query: 179 WRARSCAILTG 189
WRAR+ A+LTG
Sbjct: 187 WRARASAVLTG 197
>gi|424778325|ref|ZP_18205275.1| riboflavin-specific deaminase [Alcaligenes sp. HPC1271]
gi|422886864|gb|EKU29276.1| riboflavin-specific deaminase [Alcaligenes sp. HPC1271]
Length = 382
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ S+ S+PNPRV C+IV++ ++++ G T+ GG HAE+ AL A +G V
Sbjct: 10 MRQALELAEKSLYISAPNPRVACLIVRDGQLLASGSTQQAGGPHAEVMALRQAKERGVSV 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALIK+G +V+ ++ DPNPLV+G GV++L AGI+V
Sbjct: 70 AGATFYVTLEPCSHHGRTPPCADALIKAGAGRVVFSMYDPNPLVAGNGVSRLRQAGITVD 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
L ++A IN GFF+RM RG PW+ MK+A+SLD +++L + SQWIT ++R+D H W
Sbjct: 130 GPLCVEQALAINAGFFARMTRGRPWLWMKMAASLDGRSALPDGRSQWITGPQARDDGHHW 189
Query: 180 RARSCAILTG 189
RARSC +LTG
Sbjct: 190 RARSCVVLTG 199
>gi|114331089|ref|YP_747311.1| riboflavin biosynthesis protein RibD [Nitrosomonas eutropha C91]
gi|114308103|gb|ABI59346.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Nitrosomonas eutropha C91]
Length = 367
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 136/192 (70%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ ALQ A+ + +SPNPRVGCVIV + +++ G+ + G +HAEI+AL A G
Sbjct: 14 MSHALQLAERGLFTTSPNPRVGCVIVNDGKVVGTGWHERVGESHAEINALREA---GDLA 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC EALI + + +VI+A++DPNP V+G+G +L AG+ V+
Sbjct: 71 RGATVYVTLEPCSHHGRTPPCVEALICAEVCRVIMAMDDPNPHVNGQGKEKLQKAGVEVQ 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA ++NIGF +RM PW+R KIA+SLD + +L N SQWIT + +R D H W
Sbjct: 131 TGLLEDEAQQLNIGFITRMHHSRPWIRTKIAASLDGRIALKNGKSQWITGEPARQDGHRW 190
Query: 180 RARSCAILTGKN 191
RARSCAILTG N
Sbjct: 191 RARSCAILTGVN 202
>gi|393758869|ref|ZP_10347688.1| riboflavin-specific deaminase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393162765|gb|EJC62820.1| riboflavin-specific deaminase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 382
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ S+ S+PNPRV C+IV++ ++++ G T+ GG HAE+ AL AA +G +V
Sbjct: 10 MRQALKLAEQSLYISAPNPRVACLIVRDGQLLASGSTQQAGGPHAEVMALRQAAERGVNV 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+K+G +V+ ++ DPNPLV+G GV++L AGISV
Sbjct: 70 AGATFYVTLEPCSHHGRTPPCADALVKAGAGRVVFSMYDPNPLVAGNGVSRLRQAGISVD 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+ ++A IN GFF+RM R PW+ MK+A+SLD +++L + SQWIT ++R+D H W
Sbjct: 130 GPVCVEQALAINAGFFARMTRARPWLWMKMAASLDGRSALPDGRSQWITGPQARDDGHHW 189
Query: 180 RARSCAILTG 189
RARSC +LTG
Sbjct: 190 RARSCVVLTG 199
>gi|325983451|ref|YP_004295853.1| riboflavin biosynthesis protein RibD [Nitrosomonas sp. AL212]
gi|325532970|gb|ADZ27691.1| riboflavin biosynthesis protein RibD [Nitrosomonas sp. AL212]
Length = 366
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 133/190 (70%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+ + +++PNPRVGCV+ + RII G+ + G HAEI+AL A+
Sbjct: 10 MSYALRLAEKGLYSTTPNPRVGCVLTLDDRIIGSGWHEKAGQPHAEINAL---ASTSEAA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T YITLEPCS++G TPPC ALI +GI KVIIA+ DPNP+VSG+G L AGI+V+
Sbjct: 67 CGATAYITLEPCSHYGRTPPCVYALIDAGITKVIIAMEDPNPMVSGRGCMLLEQAGITVQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q +A +NIGF RM PW+R+K A+SLD KT+L N SQWIT + +R D H W
Sbjct: 127 TGLLQVQAQALNIGFIMRMMHKKPWIRLKTAASLDGKTALNNGISQWITGEAARQDGHRW 186
Query: 180 RARSCAILTG 189
RARSCAI+TG
Sbjct: 187 RARSCAIMTG 196
>gi|383759753|ref|YP_005438739.1| riboflavin biosynthesis protein RibD [Rubrivivax gelatinosus IL144]
gi|381380423|dbj|BAL97240.1| riboflavin biosynthesis protein RibD [Rubrivivax gelatinosus IL144]
Length = 373
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 136/191 (71%), Gaps = 4/191 (2%)
Query: 2 TLALQQAKLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
LAL + + + + PNPRVGCV+ E R++ G T+ G HAE+ AL +AAA G+D+
Sbjct: 14 ALALAEGSIGL-TDPNPRVGCVVGHEDGRVLGRGATQRAGEAHAEVMALRDAAAAGHDLR 72
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
+T ++TLEPC++ G TPPC +AL+ +GI +V++A+ DP P V+G G+A+L +AG++V+
Sbjct: 73 GATAWVTLEPCAHHGRTPPCCDALVAAGIARVVVALGDPFPQVAGAGIARLRAAGVAVEM 132
Query: 121 GLMQ--KEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ + A E+NIGF SR+QRG PWVRMKIA+SLD +T+L N +SQWIT E+R D H
Sbjct: 133 ADAEVAEAARELNIGFLSRVQRGRPWVRMKIAASLDGRTALANGASQWITGPEARADGHA 192
Query: 179 WRARSCAILTG 189
WR R+ +LTG
Sbjct: 193 WRRRAGCVLTG 203
>gi|429462943|ref|YP_007184406.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811724|ref|YP_007448179.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338457|gb|AFZ82880.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776882|gb|AGF47881.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 385
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 136/190 (71%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL A+ SI + PNP VGCVIVK I G T+S GG+HAE+ AL +A + Y +
Sbjct: 13 MSQALDLARSSICVAWPNPSVGCVIVKNNFCIGKGSTQSFGGSHAEVCALHDAMGKHYVL 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPC ++G TPPC AL+K+ K V+IA+ DPNP+V+GK + L S GI+VK
Sbjct: 73 EGSTIYVTLEPCCHYGKTPPCVNALLKAKPKSVVIAVLDPNPVVNGKSIQILRSVGINVK 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ +EA +NIGFFSR+ +PWVR KIA+SLD ++SLYN SQWITS+ SR D H W
Sbjct: 133 IGICAEEAIWLNIGFFSRVITSLPWVRTKIATSLDGRSSLYNKKSQWITSESSRKDGHYW 192
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 193 RARSGAILTG 202
>gi|30248797|ref|NP_840867.1| riboflavin biosynthesis bifunctional RibD [Nitrosomonas europaea
ATCC 19718]
gi|30180392|emb|CAD84704.1| Riboflavin biosynthesis bifunctional RibD [Nitrosomonas europaea
ATCC 19718]
Length = 363
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 134/190 (70%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+ + +SPNPRVGCVIV +++ G+ + G HAEI AL A G
Sbjct: 10 MSHALRLAERGLFTTSPNPRVGCVIVNGGKVVGTGWHERAGEPHAEIHALRKA---GDLA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC EALI++G+ KV++A+NDPNP V+G+G L AGI+++
Sbjct: 67 KGATVYVTLEPCSHHGRTPPCVEALIQAGVCKVVMAMNDPNPHVNGQGKEWLQKAGIAIQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ +A +NIGF +RM+ PWVR KIA+S D +T+L N SQWITS+ +R D H W
Sbjct: 127 AGLLADQAERLNIGFVTRMRHDRPWVRTKIAASFDGRTALKNGKSQWITSEPARRDGHKW 186
Query: 180 RARSCAILTG 189
RARSCAILTG
Sbjct: 187 RARSCAILTG 196
>gi|239816083|ref|YP_002944993.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus S110]
gi|239802660|gb|ACS19727.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus S110]
Length = 375
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 134/191 (70%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M AL A+ + + PNPRVGCV+V +I G T+ GG HAE+ AL +AAA+G+
Sbjct: 11 MAQALDLARQAGPETDPNPRVGCVLVDANGAVIGQGRTQQVGGPHAEVMALRDAAARGHS 70
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
V +T ++TLEPC++ G T PC +AL +GI +V+ ++ DPNPLV+GKG +L +AG++V
Sbjct: 71 VAGATAFVTLEPCAHHGRTGPCCDALAAAGIGRVVASLADPNPLVAGKGFERLRAAGVAV 130
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G +EA E+NIGFFSRM R PWVR+K A+SLD KT L N SQWITS+ +R D H
Sbjct: 131 EVGPGAEEARELNIGFFSRMVRKTPWVRLKAAASLDGKTGLRNGVSQWITSEPARADGHA 190
Query: 179 WRARSCAILTG 189
WRAR+ A+LTG
Sbjct: 191 WRARASAVLTG 201
>gi|319941823|ref|ZP_08016145.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Sutterella wadsworthensis 3_1_45B]
gi|319804756|gb|EFW01623.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Sutterella wadsworthensis 3_1_45B]
Length = 415
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL QA+ + S PNP VG VIV+ R++ G+T+ GG HAE+ AL +A +G V
Sbjct: 59 MDLALAQARKAWRISPPNPSVGAVIVRNGRLVGAGHTQRTGGPHAEVMALRSAFERGLSV 118
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS++G TPPC ALI+S + +V+ A+ DPNP V G+G+ L+ AGI +
Sbjct: 119 EGATVYVTLEPCSHYGRTPPCALALIQSKVGRVVAAVGDPNPKVHGRGIRMLLEAGIPAE 178
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ + EA E+NI F +RM RG PWVRMK A +LD +T+ + SQWIT + +R D W
Sbjct: 179 LGVREAEAREVNIAFLTRMTRGTPWVRMKTAVTLDGRTAFPDGRSQWITGEAARADVQFW 238
Query: 180 RARSCAILTG 189
R R+ A+LTG
Sbjct: 239 RGRAGAVLTG 248
>gi|425073680|ref|ZP_18476786.1| riboflavin biosynthesis protein RibD [Proteus mirabilis WGLW4]
gi|404594951|gb|EKA95506.1| riboflavin biosynthesis protein RibD [Proteus mirabilis WGLW4]
Length = 385
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 137/189 (72%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A L +SPNP VGCVIVKE +II GY GG HAE++AL A G +
Sbjct: 22 MRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGGPHAEVNALNMA---GENA 78
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +ALI +G+K+V+ A+ DPNP V+G+G+ +L++AGI V
Sbjct: 79 KGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLVAAGIDVS 138
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA ++NIGFF RM+ G P++++K+A+SLD KT+L + SQWITS SR D +
Sbjct: 139 HGVLMQEAEKLNIGFFKRMRTGFPYIQLKLAASLDGKTALASGESQWITSNASRQDVQNF 198
Query: 180 RARSCAILT 188
RA++ AILT
Sbjct: 199 RAQASAILT 207
>gi|425066887|ref|ZP_18470003.1| riboflavin biosynthesis protein RibD [Proteus mirabilis WGLW6]
gi|404601558|gb|EKB01950.1| riboflavin biosynthesis protein RibD [Proteus mirabilis WGLW6]
Length = 385
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 137/189 (72%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A L +SPNP VGCVIVKE +II GY GG HAE++AL A G +
Sbjct: 22 MRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGGPHAEVNALNMA---GENA 78
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +ALI +G+K+V+ A+ DPNP V+G+G+ +L++AGI V
Sbjct: 79 KGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLVAAGIDVS 138
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA ++NIGFF RM+ G P++++K+A+SLD KT+L + SQWITS SR D +
Sbjct: 139 HGVLMQEAEKLNIGFFKRMRTGFPYIQLKLAASLDGKTALASGESQWITSNASRQDVQNF 198
Query: 180 RARSCAILT 188
RA++ AILT
Sbjct: 199 RAQASAILT 207
>gi|217969969|ref|YP_002355203.1| riboflavin biosynthesis protein RibD [Thauera sp. MZ1T]
gi|217507296|gb|ACK54307.1| riboflavin biosynthesis protein RibD [Thauera sp. MZ1T]
Length = 365
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 132/186 (70%), Gaps = 4/186 (2%)
Query: 5 LQQAKLSINS-SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNST 63
LQ A +++ SPNPRVGCVIV++ + G+ G HAE+ AL A A +T
Sbjct: 15 LQLAARGLDTTSPNPRVGCVIVRDGTTVGEGWHARAGEAHAEVHALRQAGAA---ARGAT 71
Query: 64 VYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLM 123
Y+TLEPCS+FG TPPC +ALI++G+ +VI A+ DPNPLV+G+G+A+L ++GI+ GL+
Sbjct: 72 AYVTLEPCSHFGRTPPCADALIEAGVARVIAAMEDPNPLVAGRGLARLRASGIAAAHGLL 131
Query: 124 QKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARS 183
+ A E+NIGF SRM RG PWVR+K+A +LD K++L N SQWIT +R D H WRAR+
Sbjct: 132 AEAAQELNIGFVSRMTRGRPWVRLKVAGTLDGKSALDNGVSQWITGPAARRDGHRWRARA 191
Query: 184 CAILTG 189
CAILTG
Sbjct: 192 CAILTG 197
>gi|197283994|ref|YP_002149866.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Proteus mirabilis HI4320]
gi|194681481|emb|CAR40325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Proteus mirabilis HI4320]
Length = 385
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 137/189 (72%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A L +SPNP VGCVIVKE +II GY GG HAE++AL A G +
Sbjct: 22 MRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGGPHAEVNALNMA---GENA 78
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +ALI +G+K+V+ A+ DPNP V+G+G+ +L++AGI V
Sbjct: 79 KGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLVAAGIDVS 138
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA ++NIGFF RM+ G P++++K+A+SLD KT+L + SQWITS SR D +
Sbjct: 139 HGVLMQEAEKLNIGFFKRMRTGFPYIQLKLAASLDGKTALASGESQWITSNASRQDVQNF 198
Query: 180 RARSCAILT 188
RA++ AILT
Sbjct: 199 RAQASAILT 207
>gi|227358137|ref|ZP_03842478.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Proteus mirabilis ATCC 29906]
gi|227161473|gb|EEI46510.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Proteus mirabilis ATCC 29906]
Length = 385
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 137/189 (72%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A L +SPNP VGCVIVKE +II GY GG HAE++AL A G +
Sbjct: 22 MRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGGPHAEVNALNMA---GENA 78
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +ALI +G+K+V+ A+ DPNP V+G+G+ +L++AGI V
Sbjct: 79 KGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLVAAGIDVS 138
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA ++NIGFF RM+ G P++++K+A+SLD KT+L + SQWITS SR D +
Sbjct: 139 HGVLMQEAEKLNIGFFKRMRTGFPYIQLKLAASLDGKTALASGESQWITSNASRQDVQNF 198
Query: 180 RARSCAILT 188
RA++ AILT
Sbjct: 199 RAQASAILT 207
>gi|332286796|ref|YP_004418707.1| riboflavin-specific deaminase [Pusillimonas sp. T7-7]
gi|330430749|gb|AEC22083.1| putative riboflavin-specific deaminase [Pusillimonas sp. T7-7]
Length = 374
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 132/187 (70%), Gaps = 1/187 (0%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
L L ++ L I ++PNPRV C+IV++ R+++ G T+ GG HAEI AL AA +G D +
Sbjct: 11 LHLAESVLYI-TAPNPRVACLIVRDGRLLAEGATRQAGGPHAEIVALRQAAERGIDTAGA 69
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
TVY+TLEPCS++G TPPC +ALI + +V+IA+ DPNPLV G+G+A+L + GI+V +
Sbjct: 70 TVYVTLEPCSHYGRTPPCVDALIAARPARVVIAMGDPNPLVHGQGIAKLRATGIAVTTDI 129
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+EA IN GF +RM R PW+ +K+ASSLD + +L N SQWIT +R D H WRAR
Sbjct: 130 CTEEALAINPGFVARMTRKTPWLWLKLASSLDGRIALANGQSQWITGTAARADGHHWRAR 189
Query: 183 SCAILTG 189
SC +L+G
Sbjct: 190 SCVVLSG 196
>gi|146329385|ref|YP_001209386.1| riboflavin biosynthesis protein RibD [Dichelobacter nodosus
VCS1703A]
gi|146232855|gb|ABQ13833.1| riboflavin biosynthesis protein RibD [Dichelobacter nodosus
VCS1703A]
Length = 368
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 137/190 (72%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ SI +++PNPRVGCVIVK II G+ + G HAEI+AL A Q D
Sbjct: 16 MHRALELARNSIFSAAPNPRVGCVIVKNHTIIGEGWHQRAGEAHAEINALNAAGTQARD- 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPC++FG TPPCT ALI +G+K+V+IA +DPNPLV+GKG+A L +AGISV+
Sbjct: 75 --ATVYVTLEPCAHFGRTPPCTHALIAAGVKRVVIACSDPNPLVAGKGIAALRAAGISVE 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QG+ +EA ++N FF RM+ G PWV +KIA+S+D +T+L N SQWIT + +R D H
Sbjct: 133 QGICAQEALQLNRPFFHRMRWGRPWVTLKIAASMDGRTALANGESQWITGELARKDVHFH 192
Query: 180 RARSCAILTG 189
R + A+L G
Sbjct: 193 RLAADAVLAG 202
>gi|350553611|ref|ZP_08922779.1| riboflavin biosynthesis protein RibD [Thiorhodospira sibirica ATCC
700588]
gi|349790141|gb|EGZ44061.1| riboflavin biosynthesis protein RibD [Thiorhodospira sibirica ATCC
700588]
Length = 373
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNPRVGCVI +II+ G GG HAEI AL A +Q +T Y+TLEPCS
Sbjct: 24 TTSPNPRVGCVIALGAQIIALGAHHQAGGPHAEIHALQQAGSQAQ---GATAYVTLEPCS 80
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC +ALI +GI +V++A+ DPNP VSG+G+ +L AG++V+ GL + EA +N
Sbjct: 81 HHGRTPPCADALIAAGITRVVVAMQDPNPQVSGQGITRLRQAGMTVQVGLREAEARALNP 140
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM++G PWVR+K+A SLD +T+L N SQWIT + +R+D WRAR+CA+L+G
Sbjct: 141 GFIQRMEQGRPWVRLKLAVSLDGRTALANGDSQWITGEAARHDVQYWRARACALLSG 197
>gi|451812450|ref|YP_007448904.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451778352|gb|AGF49300.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 380
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K S N++PNP VGC+IVK I G T++ GG HAE+ AL+++ + +V
Sbjct: 11 MLEALKLADKASYNTAPNPSVGCIIVKNGECIGMGATRAVGGFHAEVCALIDSEKRNQNV 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST Y+TLEPCS++G TPPC + +IK+ +V++++ DPNPLVSG G+ +L S+GI V
Sbjct: 71 TGSTFYVTLEPCSHYGRTPPCVDQIIKAAPARVVVSMIDPNPLVSGSGIKRLRSSGIEVL 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ KEA +NIGF +RM PWVR+K ASS+D +T+LYN+ S+WIT +ESR D H W
Sbjct: 131 IGVCHKEALLLNIGFINRMLYSTPWVRLKSASSIDGRTALYNHKSKWITCEESRKDVHHW 190
Query: 180 RARSCAILTG 189
RARS ILTG
Sbjct: 191 RARSSIILTG 200
>gi|167623139|ref|YP_001673433.1| riboflavin biosynthesis protein RibD [Shewanella halifaxensis
HAW-EB4]
gi|167353161|gb|ABZ75774.1| riboflavin biosynthesis protein RibD [Shewanella halifaxensis
HAW-EB4]
Length = 373
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 135/190 (71%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+LA++ A+ + + PNP VG VIVK+ I+ GY GG HAE+ AL N A G D
Sbjct: 10 MSLAIELAQKGMYTTRPNPSVGSVIVKDGEIVGEGYHIRAGGPHAEVYAL-NMA--GADA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +ALI+ G+ +V+IA+ DPNP VSG+G+A L AGI V
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAKALIEHGVSRVVIAVTDPNPEVSGRGIAMLRDAGIRVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA ++N+GF RM++G+PWV +K+A+SLD KT+L N S+WIT E+R+D
Sbjct: 127 VGLMTEEAKQVNLGFLKRMEKGLPWVTVKLAASLDGKTALSNGVSKWITGPEARSDVQRL 186
Query: 180 RARSCAILTG 189
RAR CA++TG
Sbjct: 187 RARHCALVTG 196
>gi|157960990|ref|YP_001501024.1| riboflavin biosynthesis protein RibD [Shewanella pealeana ATCC
700345]
gi|157845990|gb|ABV86489.1| riboflavin biosynthesis protein RibD [Shewanella pealeana ATCC
700345]
Length = 373
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+LA++ A+ + + PNP VG VIVK+ I+ GY GG HAE+ AL N A G D
Sbjct: 10 MSLAIELAQKGMYTTRPNPSVGSVIVKDGEIVGEGYHIRAGGPHAEVYAL-NMA--GSDA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +ALI+ G+ +V+IA+ DPNP VSG+G+A L AGI V
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAKALIEHGVSRVVIAVTDPNPEVSGRGIAMLRDAGIRVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA ++N+GF RM++G+PWV +K+A+SLD KT+L N S+WIT E+R D
Sbjct: 127 VGLMTEEAKQVNLGFLKRMEKGLPWVTVKLAASLDGKTALSNGVSKWITGPEARRDVQRL 186
Query: 180 RARSCAILTG 189
RAR CA++TG
Sbjct: 187 RARHCALVTG 196
>gi|46575874|dbj|BAB88916.2| deaminase [Burkholderia glumae]
Length = 360
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + ++PNPRVGCVIVK +I GYT+ G +HAE+ A+ +A ++G+++
Sbjct: 1 MAKALELAARGLYTTTPNPRVGCVIVKHGMLIGEGYTQPAGHDHAEVRAMKDARSRGHEL 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC + L+++GI P P VSG+G A L AGI V+
Sbjct: 61 RGATAYVTLEPCSHYGRTPPCAKGLVEAGIAP-WCGDGGPEPAVSGRGYAMLREAGIEVR 119
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF SRM R PWVRMK+A+SLD +++L + +S WIT +R D H W
Sbjct: 120 GGVLEDEARELNIGFVSRMTRARPWVRMKMAASLDGRSALPDGASSWITGSAARADGHAW 179
Query: 180 RARSCAILTG 189
RAR+C+ILTG
Sbjct: 180 RARACSILTG 189
>gi|254447932|ref|ZP_05061396.1| riboflavin biosynthesis protein RibD [gamma proteobacterium
HTCC5015]
gi|198262358|gb|EDY86639.1| riboflavin biosynthesis protein RibD [gamma proteobacterium
HTCC5015]
Length = 363
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 131/190 (68%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A + S+ NPRVGCVI + +R+++ GY + PG HAE+ AL D+
Sbjct: 1 MARALQLAAKGLYSTRSNPRVGCVIARGERVLAEGYHQRPGEGHAEVRALQALPESESDL 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G T PC+EALIK+GI +V+ A+ DPNP V+G G+A+L AG+ V
Sbjct: 61 STATAYVTLEPCSHYGKTGPCSEALIKAGIGRVVAAMVDPNPDVAGSGLARLQQAGVEVG 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF RM+ G PWVR+K+A+SLD +T+L + SQWIT +R D H W
Sbjct: 121 SGLLESEARSLNPGFIQRMESGFPWVRLKMAASLDGRTALASGESQWITEAPARLDGHRW 180
Query: 180 RARSCAILTG 189
RAR+ AI+TG
Sbjct: 181 RARADAIVTG 190
>gi|260221154|emb|CBA29435.1| Riboflavin biosynthesis protein ribD [Curvibacter putative symbiont
of Hydra magnipapillata]
Length = 363
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 129/185 (69%), Gaps = 4/185 (2%)
Query: 9 KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITL 68
+ S ++PNP V CV+ K++ + G+T+ GG HAE+ AL +AA +G V +T Y+TL
Sbjct: 3 RCSYEANPNPNVYCVVFKDEYCLGLGHTQKAGGPHAEVMALRDAAEKGLSVVGATAYVTL 62
Query: 69 EPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK----QGLMQ 124
EPCS+ G T PC +ALI++GIKKV+ DPNPLV+G G A+L +AG+ V+ + +
Sbjct: 63 EPCSHHGRTGPCCDALIQAGIKKVVATNLDPNPLVAGNGFAKLRAAGVEVEVLPSEHPLA 122
Query: 125 KEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSC 184
E+ E+NIGFFSRM R PWVRMK+A+SLD T+L N SQWIT +R D H WRARSC
Sbjct: 123 IESRELNIGFFSRMIRKTPWVRMKVAASLDGTTALDNGVSQWITGPAARADGHAWRARSC 182
Query: 185 AILTG 189
AILTG
Sbjct: 183 AILTG 187
>gi|226329108|ref|ZP_03804626.1| hypothetical protein PROPEN_03011 [Proteus penneri ATCC 35198]
gi|225202294|gb|EEG84648.1| riboflavin biosynthesis protein RibD [Proteus penneri ATCC 35198]
Length = 384
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 134/189 (70%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A L +SPNP VGCVIVKE I+ GY GG HAE++AL A G
Sbjct: 21 MRRAIELAALGRFTTSPNPNVGCVIVKEGEIVGEGYHHHAGGPHAEVNALKMA---GDKA 77
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +ALI +G+K+V+ A+ DPNP V+G+G+ +L+SAGI V
Sbjct: 78 KGATAYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLLSAGIDVS 137
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA ++N+GFF RM+ G P++++K+ +SLD KT+L + SQWITSK SR D +
Sbjct: 138 HGILMQEAEKLNVGFFKRMRTGFPYIQLKLGASLDGKTALASGESQWITSKASRRDVQNF 197
Query: 180 RARSCAILT 188
RA++ AILT
Sbjct: 198 RAQASAILT 206
>gi|427819834|ref|ZP_18986897.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica D445]
gi|410570834|emb|CCN19033.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica D445]
Length = 374
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + +++PNPRVGCVIV++ +++ G T+ GG HAE+ AL AAA+G +
Sbjct: 1 MRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPAGGPHAEVCALREAAARGASL 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++TVY+TLEPCS+FG TPPC +AL+ + +V++A+ DPNP V+G+G+A+L +AGI+V
Sbjct: 61 ADATVYVTLEPCSHFGRTPPCVDALVAAAPARVVVAMGDPNPRVNGQGLARLRAAGIAVT 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G+ + EA E+N GF +RM RG+PWV +K+A+SLD +++L+N SQWIT + +R D H W
Sbjct: 121 EGVCRDEALELNAGFAARMSRGLPWVWLKLAASLDGRSALHNGVSQWITGEAARADGHHW 180
Query: 180 RARSCAILTG 189
RARS +LTG
Sbjct: 181 RARSGVVLTG 190
>gi|427825169|ref|ZP_18992231.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica Bbr77]
gi|410590434|emb|CCN05521.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica Bbr77]
Length = 374
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 142/190 (74%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + +++PNPRVGCVIV++ +++ G T+ PGG HAE+ AL AAA+G +
Sbjct: 1 MRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGGPHAEVCALREAAARGASL 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +AL+ + +V++A+ DPNP V+G+G+A+L +AGI+V
Sbjct: 61 VGATVYVTLEPCSHFGRTPPCVDALVAAAPARVVVAMGDPNPRVNGQGLARLRAAGIAVT 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+ + + EA E+N GF +RM RG+PWV +K+A+SLD +++L+N SQWIT + +R D H W
Sbjct: 121 EDVCRDEALELNAGFAARMSRGLPWVWLKLAASLDGRSALHNGVSQWITGEAARADGHHW 180
Query: 180 RARSCAILTG 189
RARS +LTG
Sbjct: 181 RARSGVVLTG 190
>gi|225023912|ref|ZP_03713104.1| hypothetical protein EIKCOROL_00778 [Eikenella corrodens ATCC
23834]
gi|224943386|gb|EEG24595.1| hypothetical protein EIKCOROL_00778 [Eikenella corrodens ATCC
23834]
Length = 364
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 131/180 (72%), Gaps = 7/180 (3%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNA--AAQGYDVYNSTVYITLE 69
++SPNPRVGCVI + +I+ G+ G HAE+ AL A AAQG +T Y+TLE
Sbjct: 24 FSTSPNPRVGCVIAQGGQIVGQGFHLKAGEPHAEVHALRQAGSAAQG-----ATAYVTLE 78
Query: 70 PCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYE 129
PC++ G TPPC EALI++G+++V+ A+ DPNPLV GKG+A L +AGI V GLM++EA +
Sbjct: 79 PCAHHGRTPPCAEALIRAGVRRVVAAMQDPNPLVVGKGLAILEAAGIQVACGLMEREARQ 138
Query: 130 INIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
+N GF SR++RG P+V++K A+SLD KT+L N SQWIT + +R+D I RA SCA+LTG
Sbjct: 139 LNRGFLSRIERGRPFVKLKTAASLDGKTALANGQSQWITGEAARHDVQIQRAESCAVLTG 198
>gi|347819504|ref|ZP_08872938.1| riboflavin biosynthesis protein RibD [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 367
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 13 NSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNPRVGCVI ++ G T+ GG HAEI AL NAA G+ V +T Y+TLEPC
Sbjct: 20 RTSPNPRVGCVIADSGGLVLGRGSTQRAGGAHAEIMALRNAAECGHCVVGATAYVTLEPC 79
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
++ G T PC +AL+ +GI +V+ +I DPNPLV+G+G A+L +AG+ V+ G + A +N
Sbjct: 80 AHHGRTGPCCDALVDAGIARVVASIADPNPLVAGQGFARLRAAGVLVEVGSGAQAARALN 139
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
+GFFSRM R PWVRMK+A+SLD T+L++ SQW+T +R D H WRAR+CA+LTG
Sbjct: 140 MGFFSRMLRKTPWVRMKVAASLDGVTALHSGVSQWLTGPAARADGHAWRARACAVLTG 197
>gi|410421794|ref|YP_006902243.1| riboflavin biosynthesis protein
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica MO149]
gi|408449089|emb|CCJ60776.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica MO149]
Length = 374
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 142/190 (74%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + +++PNPRVGCVIV++ +++ G T+ PGG HAE+ AL AAA+G +
Sbjct: 1 MRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGGPHAEVCALREAAARGASL 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +AL+ + +V++A+ DPNP V+G+G+A+L +AGI+V
Sbjct: 61 AGATVYVTLEPCSHFGRTPPCVDALVAAAPARVVVAMGDPNPRVNGQGLARLRAAGIAVT 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+ + + EA E+N GF +RM RG+PWV +K+A+SLD +++L+N SQWIT + +R D H W
Sbjct: 121 EDVCRDEALELNAGFAARMSRGLPWVWLKLAASLDGRSALHNGVSQWITGEAARADGHHW 180
Query: 180 RARSCAILTG 189
RARS +LTG
Sbjct: 181 RARSGVVLTG 190
>gi|451823308|ref|YP_007459582.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451776108|gb|AGF47149.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 367
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 132/189 (69%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
M AL A+ S+ +PNP VGC+IVK+ I G T+S GGNHAE+ A+ +A ++GY +
Sbjct: 1 MGQALDLARDSVCCAPNPSVGCIIVKDTYCIGRGSTESYGGNHAEVVAIKDALSKGYVLA 60
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
ST+Y+TLEPC ++G TPPC ++++ +V+IA+ DPNP+VSGK V QL +GI V
Sbjct: 61 GSTIYVTLEPCCHYGKTPPCLKSILDIQPLRVVIAVLDPNPIVSGKSVNQLRLSGIIVDV 120
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
G+ + EA +NIGFFSRM WVR KIASSLD K+SLYN S+WIT SR D H WR
Sbjct: 121 GVCRDEALWLNIGFFSRMLISRSWVRTKIASSLDGKSSLYNKQSKWITCNNSRKDGHYWR 180
Query: 181 ARSCAILTG 189
ARS AILTG
Sbjct: 181 ARSGAILTG 189
>gi|332527289|ref|ZP_08403353.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Rubrivivax benzoatilyticus JA2]
gi|332111705|gb|EGJ11686.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Rubrivivax benzoatilyticus JA2]
Length = 370
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 134/191 (70%), Gaps = 4/191 (2%)
Query: 2 TLALQQAKLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
LAL + + + + PNPRVGCVI + R++ G T+ G HAE+ AL +AAA G+D
Sbjct: 14 ALALAEGSIGL-TDPNPRVGCVIGHDDGRVLGRGATQRAGQAHAEVMALRDAAAAGHDTR 72
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
+T ++TLEPC++ G TPPC +AL+ +GI +V++A+ DP P V+G G+ +L +AG+ V+
Sbjct: 73 GATAWVTLEPCAHHGRTPPCCDALVAAGIARVVVAVGDPFPQVAGAGITRLRAAGVQVEL 132
Query: 121 G--LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
G + A E+NIGFFSR++RG PW+RMKIA+SLD +T+L N +SQWIT + +R D H
Sbjct: 133 GDEDIAAAARELNIGFFSRVERGRPWLRMKIAASLDGRTALPNGASQWITGEAARTDGHA 192
Query: 179 WRARSCAILTG 189
WR R+ +LTG
Sbjct: 193 WRRRAGCVLTG 203
>gi|374622527|ref|ZP_09695051.1| riboflavin biosynthesis protein RibD [Ectothiorhodospira sp. PHS-1]
gi|373941652|gb|EHQ52197.1| riboflavin biosynthesis protein RibD [Ectothiorhodospira sp. PHS-1]
Length = 369
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 133/190 (70%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + + PNPRVGCV+V++ ++ G+ G HAE+ AL +A G
Sbjct: 1 MGRALQLARRGLYTTDPNPRVGCVVVRDGHVLGEGFHVRAGEPHAEVLALAHA---GEAA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+++G+ +V++A+ DPNPLV+G+G+ +L AG++V
Sbjct: 58 RGATAYVTLEPCSHHGRTPPCVDALLRAGVGRVVVAMTDPNPLVAGRGLERLREAGVAVA 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ EA +N GF SRM+RG PWVR+K+A+SLD +T++ + S+WIT + +R D
Sbjct: 118 VGLMESEARALNPGFVSRMERGRPWVRVKLAASLDGRTAMASGESRWITGEAARRDVQFL 177
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 178 RARASAILTG 187
>gi|33593884|ref|NP_881528.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella pertussis Tohama I]
gi|384205189|ref|YP_005590928.1| putative riboflavin-specific deaminase [Bordetella pertussis CS]
gi|408416658|ref|YP_006627365.1| riboflavin-specific deaminase [Bordetella pertussis 18323]
gi|33563958|emb|CAE43220.1| putative riboflavin-specific deaminase [Bordetella pertussis Tohama
I]
gi|332383303|gb|AEE68150.1| putative riboflavin-specific deaminase [Bordetella pertussis CS]
gi|401778828|emb|CCJ64284.1| putative riboflavin-specific deaminase [Bordetella pertussis 18323]
Length = 386
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 136/177 (76%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+++PNPRVGCVIV++ +++ G T+ PGG HAE+ AL AAA+G + +TVY+TLEPCS
Sbjct: 26 STAPNPRVGCVIVRDGQVLGEGATQPPGGPHAEVCALREAAARGASLAGATVYVTLEPCS 85
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC +AL+ + +V++A+ DPNP V+G+G+A+L +AGI+V + + + EA E+N
Sbjct: 86 HFGRTPPCVDALVAAAPARVVVAMGDPNPRVNGQGLARLRAAGIAVTEDVCRDEALELNA 145
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF +RM RG+PWV +K+A+SLD +++L+N SQWIT + +R D H WRARS +LTG
Sbjct: 146 GFAARMSRGLPWVWLKLATSLDGRSALHNGVSQWITGEAARADGHHWRARSGVVLTG 202
>gi|358636046|dbj|BAL23343.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase
protein [Azoarcus sp. KH32C]
Length = 354
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 133/190 (70%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINS-SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L +++ SPNPRVGCV++++ +++ G+ + G HAEI+AL A G
Sbjct: 1 MARALELAALGLDTTSPNPRVGCVLMRDGQVVGEGWHRRAGEAHAEIEALRMA---GEAA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC +ALI +G+ V+ A+ DPNPLV+G G+ +L +AGI
Sbjct: 58 RGATAYVTLEPCAHHGRTPPCADALIAAGVASVVAAMEDPNPLVAGGGLERLRAAGIPAT 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +A E+NIGF SRM RG PW+R+K A +LD KT+L N SQWIT + +R D H W
Sbjct: 118 AGLMADDARELNIGFVSRMTRGRPWLRLKAAGTLDGKTALNNGVSQWITGEAARRDGHRW 177
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 178 RARACAILTG 187
>gi|348590665|ref|YP_004875127.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella
asinigenitalis MCE3]
gi|347974569|gb|AEP37104.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella
asinigenitalis MCE3]
Length = 390
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
Query: 15 SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYD--VYNSTVYITLEPCS 72
PNP VGCVIV +II G T+ G NHAEI+AL + +G + +ST+Y+TLEPCS
Sbjct: 24 DPNPCVGCVIVHGDKIIGQGATQVAGSNHAEIEALQDVEKRGLGSLLKDSTLYVTLEPCS 83
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC +ALI+SGI++V +A+ DPNPLV G G++ L S GI V G + +E E+N+
Sbjct: 84 HHGRTPPCVDALIRSGIREVAVALPDPNPLVGGNGISSLRSHGIDVHVGYLMEEVLELNV 143
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM G PW+R KIASSLD + SL N S+WIT+++SR+D H WR+R+ I TG
Sbjct: 144 GFFSRMLLGRPWIRTKIASSLDGRISLANGKSKWITNEQSRHDGHKWRSRASIIFTG 200
>gi|399117000|emb|CCG19812.1| riboflavin biosynthesis protein RibD [Taylorella asinigenitalis
14/45]
Length = 390
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
Query: 15 SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYD--VYNSTVYITLEPCS 72
PNP VGCVIV +II G T+ G NHAEI+AL + +G + +ST+Y+TLEPCS
Sbjct: 24 DPNPCVGCVIVHGDKIIGQGATQVAGSNHAEIEALQDVEKRGLGALIKDSTLYVTLEPCS 83
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC +ALI+SGI++V +A+ DPNPLV G G++ L S GI V G + +E E+N+
Sbjct: 84 HHGRTPPCVDALIRSGIREVAVALPDPNPLVGGNGISSLRSHGIDVHVGYLMEEVLELNV 143
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM G PW+R KIASSLD + SL N S+WIT++++R+D H WR+R+ I TG
Sbjct: 144 GFFSRMLLGRPWIRTKIASSLDGRISLANGKSKWITNEQARHDGHKWRSRASMIFTG 200
>gi|74318186|ref|YP_315926.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thiobacillus
denitrificans ATCC 25259]
gi|74057681|gb|AAZ98121.1| Riboflavin biosynthesis protein RibD
diaminohydroxyphosphoribosylaminopyrimid ine deaminase +
5-amino-6-(5- phosphoribosylamino)uracil reductase
oxidoreductase protein [Thiobacillus denitrificans ATCC
25259]
Length = 359
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ ALQ A + +SPNPRVGCV+VK+ RI+ G+ + G HAEI AL A
Sbjct: 11 MSRALQLAARGLFTTSPNPRVGCVLVKDDRIVGEGWHERAGTPHAEIHALRAAGEA---A 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+ +V+ A+ DPNPLV+G G++ L AGI+ +
Sbjct: 68 RGATAYVTLEPCSHHGRTPPCAEALIDAGVSRVVAAMTDPNPLVAGGGISMLTLAGIAAE 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ EA +N GF SRM R PWVR+K AS+LD KT+L N +SQWIT + +R D
Sbjct: 128 VGLMEAEARALNPGFVSRMTRRRPWVRLKTASTLDGKTALANGASQWITGEAARADVQRL 187
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 188 RARACAILTG 197
>gi|83648598|ref|YP_437033.1| riboflavin biosynthesis protein RibD [Hahella chejuensis KCTC 2396]
gi|83636641|gb|ABC32608.1| riboflavin biosynthesis protein RibD [Hahella chejuensis KCTC 2396]
Length = 362
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCV+VKE I+ G+ + G HAE++AL A G
Sbjct: 1 MARALRLAERGLYTTDPNPRVGCVLVKEGVIVGEGWHERAGEGHAEVNAL---RAAGESA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS++G TPPC EAL+K+G+++VI A+ DPNP V+GKG+A L AG+ +
Sbjct: 58 RGADCYVTLEPCSHYGRTPPCAEALVKAGVRRVIAAMEDPNPSVAGKGLALLRGAGVESE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G M EAYE+N+GFF RM G PWVR+K+ASSLD +++L+N S+WIT +R D
Sbjct: 118 VGCMAAEAYELNLGFFKRMSDGRPWVRVKVASSLDGRSALHNGVSKWITGAAAREDVQKL 177
Query: 180 RARSCAILTG 189
RARS A++TG
Sbjct: 178 RARSSAVITG 187
>gi|91792502|ref|YP_562153.1| riboflavin biosynthesis protein RibD [Shewanella denitrificans
OS217]
gi|91714504|gb|ABE54430.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella denitrificans OS217]
Length = 378
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ ++ GY + G HAE++AL +
Sbjct: 12 MSRAIQLAERGRYTTRPNPCVGCVIVKDGIKLAEGYHQKAGFGHAEVNALAALKSANLSA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + L++SG+ KV++AI D NP V+GKG+A L AGI+V+
Sbjct: 72 IGATAYVTLEPCSHFGRTPPCAQTLVESGVAKVVVAITDANPQVAGKGIAMLREAGIAVE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q +A E+N+GF RM+ G+PWV +K+A+SLD KT+L N S+WIT SRND
Sbjct: 132 VGLLQAQALELNLGFMKRMRTGLPWVTVKLAASLDGKTALSNGVSKWITGDASRNDVQKL 191
Query: 180 RARSCAILTG 189
RARSCA++TG
Sbjct: 192 RARSCALITG 201
>gi|33603318|ref|NP_890878.1| riboflavin biosynthesis protein
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica RB50]
gi|410474414|ref|YP_006897695.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase RibD
[Bordetella parapertussis Bpp5]
gi|412341359|ref|YP_006970114.1| riboflavin biosynthesis protein
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica 253]
gi|427816328|ref|ZP_18983392.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica 1289]
gi|33577442|emb|CAE34707.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica RB50]
gi|408444524|emb|CCJ51278.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase]
[Bordetella parapertussis Bpp5]
gi|408771193|emb|CCJ55992.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica 253]
gi|410567328|emb|CCN24899.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella bronchiseptica 1289]
Length = 374
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + +++PNPRVGCVIV++ +++ G T+ PGG HAE+ AL AAA+G +
Sbjct: 1 MRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGGPHAEVCALREAAARGASL 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +AL + +V++A+ DPNP V+G+G+A+L +AGI+V
Sbjct: 61 AGATVYVTLEPCSHFGRTPPCVDALAAAAPARVVVAMGDPNPRVNGQGLARLRAAGIAVT 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+ + + EA E+N GF +RM RG+PWV +K+A+SLD +++L+N SQWIT + +R D H W
Sbjct: 121 EDVCRDEALELNAGFAARMSRGLPWVWLKLAASLDGRSALHNGVSQWITGEAARADGHHW 180
Query: 180 RARSCAILTG 189
RARS +LTG
Sbjct: 181 RARSGVVLTG 190
>gi|326318264|ref|YP_004235936.1| riboflavin biosynthesis protein RibD [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375100|gb|ADX47369.1| riboflavin biosynthesis protein RibD [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 377
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 135/191 (70%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKR-IISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M LAL+ A+ + +SPNPRVGCV+V ++ II G T+ GG HAE+ AL +A A+G+
Sbjct: 15 MQLALRLAEEGLYRTSPNPRVGCVLVDARQQIIGQGSTQRAGGPHAEVMALRDARARGHA 74
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+ Y+TLEPCS+ G T PC +AL+++GI +V+ ++ DPNP V+G+G +L +AG+ V
Sbjct: 75 TQGAIAYVTLEPCSHHGRTGPCCDALVEAGIARVVASLGDPNPRVAGQGFERLRAAGVEV 134
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G + + E+NIGF SRM R +PWVR+K A+SLD T+L + SQWITS +R D H
Sbjct: 135 EVGPGAEASRELNIGFLSRMVRRMPWVRLKSAASLDGITALPDGQSQWITSAAARADVHA 194
Query: 179 WRARSCAILTG 189
WRAR+CA+LTG
Sbjct: 195 WRARACAVLTG 205
>gi|417958586|ref|ZP_12601500.1| riboflavin biosynthesis protein RibD [Neisseria weaveri ATCC 51223]
gi|343966800|gb|EGV35053.1| riboflavin biosynthesis protein RibD [Neisseria weaveri ATCC 51223]
Length = 369
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 128/178 (71%), Gaps = 3/178 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++SPNPRVGCVI + +I+ G+ GG HAE+ AL A G +T Y+TLEPC
Sbjct: 22 FSTSPNPRVGCVIARGSQIVGQGFHIQAGGPHAEVHALRQA---GGLAEGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC EAL+ SG+K+V+ A+ DPNPLVSGKG+A L +AGI + GL++++A E+N
Sbjct: 79 SHYGRTPPCAEALVHSGVKRVVAAMTDPNPLVSGKGLAMLEAAGIQTESGLLEQQARELN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SR++R P+VR+K A+S+D KT+L + SQWIT +E+R D RA SCA++TG
Sbjct: 139 RGFLSRIERNRPFVRLKCAASMDGKTALSDGLSQWITGEEARLDVQTLRAESCAVITG 196
>gi|187479427|ref|YP_787452.1| riboflavin biosynthesis protein [includes
diaminohydroxyphosphoribosylaminopyrimidine deaminase
and 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Bordetella avium 197N]
gi|115424014|emb|CAJ50567.1| riboflavin biosynthesis protein [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
and 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Bordetella avium 197N]
Length = 371
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 132/177 (74%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNPRVGCVIV++ +I+ G T+ PGG HAE+ AL A A G+D+ +TVY+TLEPCS
Sbjct: 14 TTTPNPRVGCVIVRDGQILGEGATQPPGGGHAEVMALRAARAAGHDLAGATVYVTLEPCS 73
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC +AL+ + +V++A+ DPNP VSG+G A+L +AG+ V G+ ++EA +N
Sbjct: 74 HFGRTPPCVDALVAAAPARVVVALGDPNPRVSGQGFARLRAAGVEVSSGVCEEEALALNP 133
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF +RM RG PW+ +K+A+SLD +++L+N SQWIT + +R D H WRAR+ +LTG
Sbjct: 134 GFVARMSRGTPWLWLKLAASLDGRSALHNGLSQWITGEAARADGHAWRARADLVLTG 190
>gi|91776267|ref|YP_546023.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Methylobacillus flagellatus KT]
gi|91710254|gb|ABE50182.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Methylobacillus flagellatus KT]
Length = 377
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL++A + ++SPNPRVGCVIVK+ +++ G G HAE+ AL A Q
Sbjct: 20 MNLALREAARGLYSTSPNPRVGCVIVKDGKVVGRGAHLRAGEPHAEVHALRMAGGQ---A 76
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+FG TPPC +AL+K+G+++V+ A+ DPNPLVSG G+ +L + GI V
Sbjct: 77 AGADAYVTLEPCSHFGRTPPCADALVKAGVRRVVAAMQDPNPLVSGSGLKRLSTHGIEVA 136
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SRM R PWVR KIA+SLD KT L N S+WIT +R W
Sbjct: 137 YGLLEHEARELNAGFISRMTRQRPWVRSKIAASLDGKTGLNNGQSKWITGPSARQHVQQW 196
Query: 180 RARSCAILTG 189
RA+SCAILTG
Sbjct: 197 RAQSCAILTG 206
>gi|89901442|ref|YP_523913.1| riboflavin biosynthesis protein RibD [Rhodoferax ferrireducens
T118]
gi|89346179|gb|ABD70382.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Rhodoferax ferrireducens T118]
Length = 377
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 127/179 (70%), Gaps = 5/179 (2%)
Query: 16 PNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSYF 74
PNPRVGCV+ + + G+T+ GG HAEI AL +A A+G V +T Y+TLEPCS+
Sbjct: 25 PNPRVGCVMTDCRENTLGQGHTQRTGGAHAEIVALRDAKARGNSVVGATAYVTLEPCSHH 84
Query: 75 GYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK----QGLMQKEAYEI 130
G T PC +ALI +GIKKV+ +I DPNPLVSG+G +L +AG+ V+ + + E+
Sbjct: 85 GRTGPCCDALIAAGIKKVVASIADPNPLVSGQGFERLRAAGVEVEVMPADDPLAIASREL 144
Query: 131 NIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
NIGFFSRM R PWVR+K+A+SLD K++L N SQWITS+ +R D H WRAR+CA+LTG
Sbjct: 145 NIGFFSRMIRKTPWVRLKMAASLDGKSALENGVSQWITSEAARTDGHAWRARACAVLTG 203
>gi|357406246|ref|YP_004918170.1| riboflavin biosynthesis protein RibD [Methylomicrobium alcaliphilum
20Z]
gi|351718911|emb|CCE24585.1| bifunctional riboflavin biosynthesis protein ribD [Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase)] [Methylomicrobium alcaliphilum 20Z]
Length = 363
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 135/192 (70%), Gaps = 5/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A + + PNPRVGCV+VKE II+ G+ G HAE++AL A +
Sbjct: 12 MARAIQLAHNGMYTTQPNPRVGCVLVKEGAIIAEGWHARAGEGHAEVEALKRAQSP---- 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNPLVSG+G+ +L AGI V+
Sbjct: 68 EGATVYVTLEPCSHHGRTPPCCEALVKAGVVRVVAAMQDPNPLVSGRGLTRLNDAGIDVR 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++Q EA ++N GF RMQ G+P++R K+A SLD +T++ + S+WITS +SR D H +
Sbjct: 128 CGVLQNEAMKLNPGFIKRMQTGLPFIRGKLAMSLDGRTAMASGESKWITSDQSRADVHRY 187
Query: 180 RARSCAILTGKN 191
RARS AILTG N
Sbjct: 188 RARSSAILTGIN 199
>gi|33598380|ref|NP_886023.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bordetella parapertussis 12822]
gi|33574509|emb|CAE39154.1| putative riboflavin-specific deaminase [Bordetella parapertussis]
Length = 386
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + +++PNPRVGCVIV++ +++ G T+ PGG HAE+ AL AAA+G +
Sbjct: 13 MRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGGPHAEVCALREAAARGASL 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC +AL + +V++A+ DPNP V+G+G+A+L +AGI+V
Sbjct: 73 AGATVYVTLEPCSHFGRTPPCVDALAAAAPARVVVAMGDPNPRVNGQGLARLRAAGIAVT 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+ + + EA E+N GF +RM RG+PWV +K+A+SLD +++L+N SQW+T + +R D H W
Sbjct: 133 EDVCRDEALELNAGFAARMSRGLPWVWLKLAASLDGRSALHNGVSQWMTGEAARADGHHW 192
Query: 180 RARSCAILTG 189
RARS +LTG
Sbjct: 193 RARSGVVLTG 202
>gi|383315775|ref|YP_005376617.1| riboflavin biosynthesis protein RibD [Frateuria aurantia DSM 6220]
gi|379042879|gb|AFC84935.1| riboflavin biosynthesis protein RibD [Frateuria aurantia DSM 6220]
Length = 368
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 130/189 (68%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
MT AL A + + PNPRVGCVI + ++ G+ + G HAE+ AL A AQ +
Sbjct: 14 MTQALALAAKGLYTTDPNPRVGCVIATGEGVVGQGWHRRAGEPHAEVHALREAGAQAH-- 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC +ALI++G+ +V++A DP P V+G+G+ +L AGI V
Sbjct: 72 -GATAYVTLEPCAHHGRTPPCADALIEAGVARVVVACQDPFPAVAGQGIERLRQAGIQVD 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q EA +N GFFSR++RG PW+R+K+A SLD +T+L N S+WIT + +R D+H W
Sbjct: 131 IGLLQAEARALNAGFFSRIERGRPWLRLKMAMSLDGRTALVNGESRWITGEAARADAHRW 190
Query: 180 RARSCAILT 188
RARS AIL+
Sbjct: 191 RARSSAILS 199
>gi|442608547|ref|ZP_21023294.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441749943|emb|CCQ09356.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 371
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 139/194 (71%), Gaps = 8/194 (4%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNA--AAQGY 57
M +A++ AK ++PNP VGCV+VK+ +I+ G+ GG HAE+ AL A AA+G
Sbjct: 12 MQMAIELAKQGQFTTTPNPNVGCVLVKDGKIVGQGFHIQAGGPHAEVHALRQAGDAAKG- 70
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T Y+TLEPCS+FG TPPC + LI++G+ KVI A+ DPNP VSGKG+A L AGI
Sbjct: 71 ----ATAYVTLEPCSHFGRTPPCAKGLIEAGVAKVIAAMVDPNPKVSGKGLAMLEQAGIE 126
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +AY++N GFF RM+ G+P+V+ K+A+SLD KT+L + S+WITS +R+D
Sbjct: 127 IAFGLLESQAYQLNEGFFKRMKVGLPFVQCKLAASLDGKTALASGESKWITSPAARDDVQ 186
Query: 178 IWRARSCAILTGKN 191
+RA+SCAI++G +
Sbjct: 187 RFRAKSCAIISGAD 200
>gi|437999552|ref|YP_007183285.1| riboflavin biosynthesis protein RibD [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451813173|ref|YP_007449626.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429338786|gb|AFZ83208.1| riboflavin biosynthesis protein RibD [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451779142|gb|AGF50022.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 380
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 133/190 (70%), Gaps = 1/190 (0%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K S N++PNP VGC+IVK+ + I G T GG+HAE+ AL++A DV
Sbjct: 11 MREALKLADKASYNTAPNPSVGCIIVKDGKCIGMGATSFVGGDHAEVCALIDARKNNQDV 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
S YITLEPCS++G TPPC + +IK+ +V++++ DPNPLVSG G+ +L +GI V
Sbjct: 71 TGSIFYITLEPCSHYGKTPPCVDQIIKASPARVVLSMVDPNPLVSGNGIKKLRLSGIEVL 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ KEA +NIGF RM PWVR+K+ASSLD +T+L+N S+WIT +ESR ++H W
Sbjct: 131 VGVCHKEALWLNIGFAYRMLCSKPWVRLKVASSLDGRTALHNYKSKWITCEESRKNTHHW 190
Query: 180 RARSCAILTG 189
RARS ILTG
Sbjct: 191 RARSGIILTG 200
>gi|237809265|ref|YP_002893705.1| riboflavin biosynthesis protein RibD [Tolumonas auensis DSM 9187]
gi|237501526|gb|ACQ94119.1| riboflavin biosynthesis protein RibD [Tolumonas auensis DSM 9187]
Length = 370
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ ALQ A+ +SPNP VGCVIV + RI+ G+ G HAE+ AL A G
Sbjct: 10 MSRALQLAEQGRFTTSPNPNVGCVIVADGRIVGEGFHLRAGEPHAEVHALRMA---GDKA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP VSG+G+ +L AG++++
Sbjct: 67 RGATAYVTLEPCSHFGRTPPCADALVNAGVARVVAAMEDPNPQVSGRGMRRLADAGVTIQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q +A +N GF RM+ G+P+VR+K+A+SLD +T+L N SQWITS +R D W
Sbjct: 127 TGLLQAQAEALNPGFIKRMRHGLPYVRLKLAASLDGRTALANGQSQWITSPAARADVQRW 186
Query: 180 RARSCAILTGKN 191
RA+S AILTG +
Sbjct: 187 RAQSSAILTGAD 198
>gi|212555672|gb|ACJ28126.1| Riboflavin biosynthesis protein RibD [Shewanella piezotolerans WP3]
Length = 373
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 133/190 (70%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+LA++ A+ + + PNP VG VIVK+ I+ GY GG HAE+ AL N A G D
Sbjct: 10 MSLAIELAQKGLYTTRPNPCVGSVIVKDSVIVGEGYHIRAGGPHAEVYAL-NMA--GNDA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +ALI++G+ +V++A+ DPNP VSG+G+A L AGI V
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAKALIEAGVSRVVVAVTDPNPQVSGRGIAMLQDAGIQVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ A ++N+GF RMQ+G+PWV +K+A+SLD KT+L N S+WIT E+R D
Sbjct: 127 VGLLTDAAKQVNLGFLKRMQQGLPWVTVKLAASLDGKTALSNGESKWITGPEARRDVQRI 186
Query: 180 RARSCAILTG 189
RAR CA++TG
Sbjct: 187 RARHCALITG 196
>gi|319942892|ref|ZP_08017175.1| riboflavin biosynthesis protein RibD [Lautropia mirabilis ATCC
51599]
gi|319743434|gb|EFV95838.1| riboflavin biosynthesis protein RibD [Lautropia mirabilis ATCC
51599]
Length = 385
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ A +N++ PNPRVGCVIV++ ++ G+ + G HAE+ AL A G
Sbjct: 10 MQRAIDLAWQGVNTTMPNPRVGCVIVRDGEVVGEGWHRRAGEPHAEVLALQQA---GERA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC + L+++G+ +V+ A+ DPNPLV+G+G+ +L +AGI V+
Sbjct: 67 RGATAYVTLEPCSHHGRTGPCADRLVEAGVARVVAAMEDPNPLVNGQGLGRLRAAGIDVR 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA +N GF SRMQRG PWVR+K A+SLD +L + SQWIT + +R D H W
Sbjct: 127 CGLLEEEARALNEGFISRMQRGRPWVRLKAATSLDGFIALPDGESQWITGEAARTDGHAW 186
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 187 RARASAILTG 196
>gi|381401829|ref|ZP_09926721.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Kingella
kingae PYKK081]
gi|380833228|gb|EIC13104.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Kingella
kingae PYKK081]
Length = 360
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++SPNPRVGCVI +II G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FSTSPNPRVGCVIAHGSQIIGQGFHVQAGSPHAEVHAIRQA---GELARGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LI +G+ +V+ A+ DPNPLV+GKG+A L +AGI V+QGL++ EA ++N
Sbjct: 81 SHYGRTPPCAEGLIAAGVSRVVAAMTDPNPLVAGKGLAMLQAAGIVVEQGLLEHEARQLN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SR++R P+V +KIA+SLD KT+L N SQWIT +R D I RA+SCA+LTG
Sbjct: 141 RGFLSRIERNRPFVSLKIAASLDGKTALSNGQSQWITGAAARADVQIQRAQSCAVLTG 198
>gi|119474644|ref|ZP_01614997.1| riboflavin-specific deaminase/reductase [marine gamma
proteobacterium HTCC2143]
gi|119450847|gb|EAW32080.1| riboflavin-specific deaminase/reductase [marine gamma
proteobacterium HTCC2143]
Length = 370
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 137/192 (71%), Gaps = 5/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ A+ + +SPNPRVGC+IV+ +II GY G HAE++A+ +A +V
Sbjct: 7 MQLAIDLAEKGLYTASPNPRVGCIIVRNGQIIGRGYHVRTGQAHAEVNAIADAG----NV 62
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++TVY+TLEPCS+ G TPPC++ALI + + +V++A+ DPNPLV+G G+A+L AGI V+
Sbjct: 63 EDATVYVTLEPCSHTGRTPPCSDALITANVARVVVAMADPNPLVAGSGIAKLEQAGIVVE 122
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ +A ++N G+ RM+ G+PWVR+K+A SLD +T++ + SQWIT K +R+D
Sbjct: 123 LGLLASQARQLNPGYIKRMELGLPWVRVKLAMSLDGRTAMASGESQWITGKRARSDVQQL 182
Query: 180 RARSCAILTGKN 191
RARSC +++G N
Sbjct: 183 RARSCVVMSGVN 194
>gi|333376545|ref|ZP_08468319.1| riboflavin biosynthesis protein RibD [Kingella kingae ATCC 23330]
gi|332967791|gb|EGK06895.1| riboflavin biosynthesis protein RibD [Kingella kingae ATCC 23330]
Length = 360
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++SPNPRVGCVI +II G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FSTSPNPRVGCVIAHGSQIIGQGFHVQAGSPHAEVHAIRQA---GELARGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LI +G+ +V+ A+ DPNPLV+GKG+A L +AGI V+QGL++ EA ++N
Sbjct: 81 SHYGRTPPCAEGLIAAGVSRVVAAMTDPNPLVAGKGLAMLQAAGIMVEQGLLEHEARQLN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SR++R P+V +KIA+SLD KT+L N SQWIT +R D I RA+SCA+LTG
Sbjct: 141 RGFLSRIERNRPFVSLKIAASLDGKTALSNGQSQWITGAAARADVQIQRAQSCAVLTG 198
>gi|163750014|ref|ZP_02157258.1| riboflavin biosynthesis protein RibD [Shewanella benthica KT99]
gi|161330288|gb|EDQ01269.1| riboflavin biosynthesis protein RibD [Shewanella benthica KT99]
Length = 380
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 131/193 (67%), Gaps = 4/193 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M+ A++ A+ + + PNP VGCVI + +I+ G+ GG HAE+ AL A A G
Sbjct: 10 MSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFHIRAGGPHAEVHALAMATQRADGL 69
Query: 58 -DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGI 116
D+ +T Y+TLEPCS++G TPPC EALIK GI +V++A+ DPNP VSG+G+ L AGI
Sbjct: 70 ADLKGATAYVTLEPCSHYGRTPPCAEALIKHGISRVVVAVEDPNPRVSGRGINMLKDAGI 129
Query: 117 SVKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDS 176
V GL+ EA +IN GF RMQ +PWV +K+A+SLD KT+L N +S+WIT ESR D
Sbjct: 130 KVDVGLLGDEAAQINPGFMKRMQSALPWVTVKLAASLDGKTALSNGASKWITGPESRRDV 189
Query: 177 HIWRARSCAILTG 189
RARSCA++TG
Sbjct: 190 QRLRARSCALVTG 202
>gi|349608728|ref|ZP_08888151.1| riboflavin biosynthesis protein RibD [Neisseria sp. GT4A_CT1]
gi|348611585|gb|EGY61229.1| riboflavin biosynthesis protein RibD [Neisseria sp. GT4A_CT1]
Length = 357
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 2 MQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA---GEMA 58
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALI SG+ +V+ A+ DPNPLV+GKG+A L +AGI +
Sbjct: 59 RGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLAMLEAAGIRTE 118
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++RG P+VR+K A+SLD KT+L + S WIT + +R D
Sbjct: 119 SGLLETEARELNRGFLSRIERGRPFVRIKCAASLDGKTALADGRSYWITGEAARADVQTL 178
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 179 RAESCAVLTG 188
>gi|261365730|ref|ZP_05978613.1| riboflavin biosynthesis protein RibD [Neisseria mucosa ATCC 25996]
gi|288565756|gb|EFC87316.1| riboflavin biosynthesis protein RibD [Neisseria mucosa ATCC 25996]
Length = 365
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALI SG+ +V+ A+ DPNPLV+GKG+A L +AGI +
Sbjct: 67 RGATAYVTLEPCSHYGRTPPCAEALISSGVSRVVAAMTDPNPLVAGKGLAMLEAAGIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++RG P+VR+K A+SLD KT+L + S WIT + +R D
Sbjct: 127 SGLLEAEARELNRGFLSRIERGRPFVRIKCAASLDGKTALADGRSYWITGEAARADVQTL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|255067329|ref|ZP_05319184.1| riboflavin biosynthesis protein RibD [Neisseria sicca ATCC 29256]
gi|255048480|gb|EET43944.1| riboflavin biosynthesis protein RibD [Neisseria sicca ATCC 29256]
Length = 365
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALI SG+ +V+ A+ DPNPLV+GKG+A L +AGI +
Sbjct: 67 RGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLAMLEAAGIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++RG P+VR+K A+SLD KT+L + S WIT + +R D
Sbjct: 127 SGLLETEARELNRGFLSRIERGRPFVRIKCAASLDGKTALADGRSYWITGEAARADVQTL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|298369934|ref|ZP_06981250.1| riboflavin biosynthesis protein RibD [Neisseria sp. oral taxon 014
str. F0314]
gi|298281394|gb|EFI22883.1| riboflavin biosynthesis protein RibD [Neisseria sp. oral taxon 014
str. F0314]
Length = 367
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALI+SG+ +V+ A+ DPNPLV+GKG+A L +A I +
Sbjct: 67 RGATAYVTLEPCSHYGRTPPCAEALIRSGVARVVAAMTDPNPLVAGKGLAMLEAADIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++RG P+VR+K A+SLD KT+L + S+WIT + +R D I
Sbjct: 127 SGLLETEARELNRGFLSRIERGRPFVRIKCAASLDGKTALSDGLSKWITGEAAREDVQIL 186
Query: 180 RARSCAILTG 189
RA SCA++TG
Sbjct: 187 RAESCAVVTG 196
>gi|387128126|ref|YP_006296731.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Methylophaga
sp. JAM1]
gi|386275188|gb|AFI85086.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Methylophaga
sp. JAM1]
Length = 365
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A K + PNPRVGCVIVK +II G+ G HAEI+AL +A G+D
Sbjct: 8 MAQAIQLAWKGLYTADPNPRVGCVIVKNDQIIGQGWHHRAGEAHAEINALHDA---GHDA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+FG TPPC +ALI++GIK++ +A+ DPNP+VSG G+ ++ AGI V
Sbjct: 65 EGADCYVTLEPCSHFGRTPPCADALIRAGIKRLFVAMTDPNPVVSGTGIKRIEQAGIEVH 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QG++Q +A ++N GF RM+ G P+VR KIA SLD +T++ + S+WIT E+R D
Sbjct: 125 QGILQSQAEQLNPGFIQRMRLGRPFVRSKIAMSLDGRTAMASGESKWITGPEARADVQKL 184
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 185 RARSSAILTG 194
>gi|257093103|ref|YP_003166744.1| riboflavin biosynthesis protein RibD [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045627|gb|ACV34815.1| riboflavin biosynthesis protein RibD [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 365
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + ++PNPRVGCVIV + ++ G+ GG HAE+ AL A G
Sbjct: 10 MARALRLAERGLYTTTPNPRVGCVIVADGEVVGEGWHVRAGGRHAEVHAL---QAAGEKA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EAL+ +G+ +V+ A+ DPNP V+G G+A L +AG+ +
Sbjct: 67 AGATAYVTLEPCSHHGRTPPCVEALLAAGVARVVAAMQDPNPQVAGSGLASLQAAGVRAE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA EINIGF +RM R PW+R+K+A+SLD KT+L N +SQW+T +R D H W
Sbjct: 127 CGLLAAEAGEINIGFVARMTRCRPWLRLKLAASLDGKTALRNGASQWLTGPAARQDGHRW 186
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 187 RARACAILTG 196
>gi|389751940|ref|ZP_10191128.1| riboflavin biosynthesis protein RibD [Rhodanobacter sp. 115]
gi|388433623|gb|EIL90588.1| riboflavin biosynthesis protein RibD [Rhodanobacter sp. 115]
Length = 389
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVI + ++ G+ + G HAE+ AL A G
Sbjct: 11 MAHALRLAERGLFTTQPNPRVGCVIAQGAEVVGAGFHQRAGEPHAEVFALREA---GERA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC +AL+ +G+ +V+IA DP P V+G+G+ +L +AGI V+
Sbjct: 68 RGATAYVTLEPCAHHGRTPPCADALVAAGVARVVIAAEDPFPKVAGRGIEKLRAAGIVVE 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A E+NIGFFSR++RG P+VR+K+A SLD +T+L N S+WIT +R D W
Sbjct: 128 NGLLREQARELNIGFFSRIERGRPFVRVKLAMSLDGRTALANGESKWITGAAARADVQRW 187
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 188 RARSSAILTG 197
>gi|313669033|ref|YP_004049317.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/phosphoribosylaminouracil reductase [Neisseria
lactamica 020-06]
gi|313006495|emb|CBN87958.1| putative diaminohydroxyphosphoribosylaminopyrimidine
deaminase/phosphoribosylaminouracil reductase [Neisseria
lactamica 020-06]
Length = 369
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 133/190 (70%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI + +I+ G+ G HAE+ AL A G
Sbjct: 10 MQNALKLAALGRFSTSPNPRVGCVIAQGGQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL+++G+ +V++A+ DPNPLV+GKG+A L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVVAMRDPNPLVAGKGLALLEAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLESEARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|418288959|ref|ZP_12901366.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM233]
gi|372200654|gb|EHP14698.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM233]
Length = 369
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M +AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MEIALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLAMLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|418291209|ref|ZP_12903248.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM220]
gi|372200241|gb|EHP14348.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM220]
Length = 369
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MEIALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALHQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L SAGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLESAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D +
Sbjct: 127 CGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|289209046|ref|YP_003461112.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp. K90mix]
gi|288944677|gb|ADC72376.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp. K90mix]
Length = 396
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++ PNPRVGCV+V+E ++ G G +HAE++AL A
Sbjct: 16 MARALELADLGRFSADPNPRVGCVLVREGEVVGEGLHWRAGESHAEVNALRAAGEA---A 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPCTEALI++G+ +V+IA+ DPNP V G G+ L +AGI V+
Sbjct: 73 RGATVYVTLEPCSHHGRTPPCTEALIQAGVARVVIAMQDPNPQVCGGGMEALRAAGIEVE 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM++G PWVR+K+A+SLD +T++ + S+WIT + +R D +W
Sbjct: 133 TGVLEAEARALNPGFVQRMEQGRPWVRIKLAASLDGRTAMASGESRWITGEAARRDVQLW 192
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 193 RARAGAILTG 202
>gi|419798932|ref|ZP_14324318.1| riboflavin biosynthesis protein RibD [Neisseria sicca VK64]
gi|385693267|gb|EIG23918.1| riboflavin biosynthesis protein RibD [Neisseria sicca VK64]
Length = 365
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALI SG+ +V+ A+ DPNPLV+GKG+A L AGI +
Sbjct: 67 RGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLAMLEVAGIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++RG P+VR+K A+SLD KT+L + S WIT + +R D
Sbjct: 127 SGLLETEARELNRGFLSRIERGRPFVRVKCAASLDGKTALADGRSYWITGEAARADVQTL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|170725743|ref|YP_001759769.1| riboflavin biosynthesis protein RibD [Shewanella woodyi ATCC 51908]
gi|169811090|gb|ACA85674.1| riboflavin biosynthesis protein RibD [Shewanella woodyi ATCC 51908]
Length = 379
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQG-YD 58
M+ A++ A+ + + PNP VGCV+ K+ +I+ G+ GG HAE+ AL A +
Sbjct: 11 MSRAIKLARQGLYTTQPNPCVGCVVTKDGQILGEGFHIKAGGPHAEVHALAMANSDSNLG 70
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPCS++G TPPC EALI + + +V++A+ DPNP V G+G+A L AGI V
Sbjct: 71 AKGATAYVTLEPCSHYGRTPPCAEALIHNKLARVVVAVEDPNPQVCGRGIAMLRDAGIQV 130
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
GL+Q EAY+IN GF RM+ G+PWV +K+ASSLD KT+L N +S+WIT E+R D
Sbjct: 131 DVGLLQDEAYKINPGFMKRMETGLPWVTVKLASSLDGKTALANGASKWITGPEARRDVQR 190
Query: 179 WRARSCAILTG 189
RAR CA++TG
Sbjct: 191 LRARHCALVTG 201
>gi|261401666|ref|ZP_05987791.1| riboflavin biosynthesis protein RibD [Neisseria lactamica ATCC
23970]
gi|269208249|gb|EEZ74704.1| riboflavin biosynthesis protein RibD [Neisseria lactamica ATCC
23970]
Length = 369
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI + +++ G+ G HAE+ AL A G
Sbjct: 10 MQNALKLAALGRFSTSPNPRVGCVIAQGGQVVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLESEARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|340361225|ref|ZP_08683658.1| riboflavin biosynthesis protein RibD [Neisseria macacae ATCC 33926]
gi|339888853|gb|EGQ78278.1| riboflavin biosynthesis protein RibD [Neisseria macacae ATCC 33926]
Length = 365
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALI SG+ +V+ A+ DPNPLV+GKG+A L +AGI +
Sbjct: 67 RGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLAMLEAAGIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ E E+N GF SR++RG P+VR+K A+SLD KT+L + S WIT + +R D
Sbjct: 127 SGLLETEVRELNRGFLSRIERGRPFVRIKCAASLDGKTALADGRSYWITGEAARADVQTL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|119472108|ref|ZP_01614339.1| Riboflavin biosynthesis protein [Alteromonadales bacterium TW-7]
gi|119445128|gb|EAW26421.1| Riboflavin biosynthesis protein [Alteromonadales bacterium TW-7]
Length = 383
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK+ +II G+ + G HAE++AL A G
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKDNQIIGEGFHQLAGQGHAEVNAL---AVAGEKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +GIKKVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 QGATAYVTLEPCSHYGRTPPCAEGLKAAGIKKVIAAMVDTNPQVAGKGLKILSDAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA +N GFF RM++G+P+V K+A+S+D KT+L N S+WIT ++R D ++
Sbjct: 132 HGLLEQEARALNFGFFKRMEQGLPYVTCKLAASIDGKTALKNGKSKWITGPDARKDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|422110917|ref|ZP_16380772.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378405|emb|CBX22958.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 369
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI + +++ G+ G HAE+ AL A G
Sbjct: 10 MQNALKLAALGRFSTSPNPRVGCVIAQGGQVVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLESEARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|430762138|ref|YP_007217995.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430011762|gb|AGA34514.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 384
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A L + + PNPRVG V V++ II G G HAEI AL A G
Sbjct: 7 MARALQLAHLGLYTTDPNPRVGSVAVRDGAIIGEGVHWRAGEPHAEIHAL---RAAGERA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +ALI +G+ +V+IA+ DPNP V+G+GV +L +AGI V+
Sbjct: 64 RGATVYVTLEPCSHHGRTPPCADALIAAGVARVVIAMQDPNPHVAGRGVERLRAAGIEVR 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RMQ G PWVR+K+ASSLD +T++ + S+WIT +R D W
Sbjct: 124 SGMLEFEARRLNPGFVRRMQSGRPWVRVKLASSLDGRTAMASGDSRWITGPAARRDVQHW 183
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 184 RARAGAILTG 193
>gi|397688289|ref|YP_006525608.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
10701]
gi|395809845|gb|AFN79250.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
10701]
Length = 375
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + S+ PNPRVGCVIV++ + G+ G HAE+ AL A G
Sbjct: 9 MARALQLARKGLYSTHPNPRVGCVIVRDGERVGEGWHVRAGEPHAEVHALRQA---GDRA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNPLV+G+G+ +L S GI V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMRDPNPLVAGRGLERLRSVGIEVA 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P++R K+A SLD +T++ + SQWIT +R D
Sbjct: 126 SGVLEGEARELNIGFVKRMEHGLPYLRAKLAMSLDGRTAMASGESQWITGPAARADVQRL 185
Query: 180 RARSCAILTGKN 191
RARS A+LTG +
Sbjct: 186 RARSSAVLTGAD 197
>gi|372271364|ref|ZP_09507412.1| riboflavin biosynthesis protein RibD [Marinobacterium stanieri S30]
Length = 381
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + ++PNPRVGCVIVK+ +I G G HAE+ AL A G
Sbjct: 13 MARALQLAEQGLYTTNPNPRVGCVIVKDGELIGEGAHLKAGEPHAEVHALRMA---GEQA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNPLV+G+G+A+L GI
Sbjct: 70 RGGAAYVTLEPCSHHGKTPPCAEALVKAGVGRVVAAMQDPNPLVAGRGLARLQDVGIDTA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N GF SRM+RG P+VR+K+ASSLD +T++ + SQWIT +R+D
Sbjct: 130 HGLLESQARALNPGFISRMERGRPYVRLKLASSLDGRTAMQSGESQWITGAAARSDVQRL 189
Query: 180 RARSCAILTG 189
RARS A+LTG
Sbjct: 190 RARSSAVLTG 199
>gi|350562343|ref|ZP_08931178.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349779576|gb|EGZ33919.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 384
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A++ + + PNPRVG V+V+ II G G HAEI AL A G
Sbjct: 7 MARALQLARVGLYTTDPNPRVGSVVVRAGEIIGEGTHWRAGEPHAEIHAL---HAAGERA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +ALI +G+ +V+IA+ DPNP V+G+G+ +L +AGI V+
Sbjct: 64 RGATVYVTLEPCSHHGRTPPCADALIAAGVARVVIAMQDPNPRVAGRGIERLRNAGIEVR 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RMQ G PWVR+K+ASSLD +T++ + S+WIT +R D W
Sbjct: 124 PGVLEFEARQLNPGFVRRMQSGRPWVRVKLASSLDGRTAMASGESRWITGPAARRDVQHW 183
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 184 RARAGAILTG 193
>gi|113969440|ref|YP_733233.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella sp. MR-4]
gi|113884124|gb|ABI38176.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella sp. MR-4]
Length = 381
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 11 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GELA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V G+G+ L AGI V
Sbjct: 68 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIQVD 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+PWV +K+A+SLD KT+L N S+WIT E+R D
Sbjct: 128 VGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKTALSNGVSKWITGPEARRDVQRL 187
Query: 180 RARSCAILTG 189
R R+CA++TG
Sbjct: 188 RLRACALVTG 197
>gi|422349865|ref|ZP_16430753.1| riboflavin biosynthesis protein RibD [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657714|gb|EKB30596.1| riboflavin biosynthesis protein RibD [Sutterella wadsworthensis
2_1_59BFAA]
Length = 372
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL++A K S PNP VG VIV++ R+I G+T+ GG HAE+ AL +AAA+G V
Sbjct: 18 MGLALEEAAKARRLSPPNPAVGAVIVRDGRVIGRGFTQQTGGPHAEVMALRDAAARGESV 77
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPCS++G TPPC A+++ I +V+ ++ DPNP V+G+G+ + AGI V
Sbjct: 78 EGATIYVTLEPCSHWGRTPPCALAIVEHRIGRVVTSVADPNPQVAGRGLKMIRDAGIEVT 137
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G+ KE + N GF +RM G PWVRMK A++LD +T+ + SQWIT +R DS W
Sbjct: 138 EGVRSKEGWLSNRGFLTRMTTGRPWVRMKCAATLDGRTAFPDGRSQWITGPAAREDSQYW 197
Query: 180 RARSCAILTG 189
RA S A++TG
Sbjct: 198 RAVSGAVVTG 207
>gi|253998546|ref|YP_003050609.1| riboflavin biosynthesis protein RibD [Methylovorus glucosetrophus
SIP3-4]
gi|253985225|gb|ACT50082.1| riboflavin biosynthesis protein RibD [Methylovorus glucosetrophus
SIP3-4]
Length = 368
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A+ + ++PNPRVGCVIVK+ +I+ G G HAE+ AL A AQG
Sbjct: 10 MARALRLAEQGLYTTTPNPRVGCVIVKDGQIVGEGAHLKAGEPHAEVHALRQAGNLAQGA 69
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
D Y +TLEPCS+ G TPPC +ALIK+G+K+V+ A+ DPNP V+G G+ +L + GI+
Sbjct: 70 DAY-----VTLEPCSHHGRTPPCADALIKAGVKRVVAAMQDPNPQVAGSGLQRLQAQGIA 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ GL++ +A +N GF SRM R P+VR KIA+SLD T+L N SQWIT E+R D
Sbjct: 125 VQSGLLEAQARSLNAGFISRMTRRRPFVRSKIAASLDGATALQNGISQWITGPEARKDVQ 184
Query: 178 IWRARSCAILTG 189
WRA+SC +LTG
Sbjct: 185 HWRAQSCVMLTG 196
>gi|121634268|ref|YP_974513.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/phosphoribosylamino)uracil reductase
[Neisseria meningitidis FAM18]
gi|416179602|ref|ZP_11611038.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M6190]
gi|416193196|ref|ZP_11617073.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
ES14902]
gi|421561836|ref|ZP_16007673.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM2657]
gi|433493169|ref|ZP_20450255.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM586]
gi|433495245|ref|ZP_20452307.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM762]
gi|433497377|ref|ZP_20454406.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M7089]
gi|433497971|ref|ZP_20454987.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M7124]
gi|433501473|ref|ZP_20458454.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM174]
gi|433503567|ref|ZP_20460523.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM126]
gi|120865974|emb|CAM09711.1| putative diaminohydroxyphosphoribosylaminopyrimidine
deaminase/phosphoribosylamino)uracil reductase
[Neisseria meningitidis FAM18]
gi|254670038|emb|CBA04840.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Neisseria meningitidis alpha153]
gi|325131464|gb|EGC54171.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M6190]
gi|325137571|gb|EGC60152.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
ES14902]
gi|402336221|gb|EJU71482.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM2657]
gi|432226772|gb|ELK82495.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM586]
gi|432228569|gb|ELK84268.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM762]
gi|432232247|gb|ELK87895.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M7089]
gi|432233314|gb|ELK88942.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM174]
gi|432236738|gb|ELK92342.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M7124]
gi|432239037|gb|ELK94597.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM126]
Length = 369
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 METALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|452127315|ref|ZP_21939898.1| riboflavin biosynthesis protein [Bordetella holmesii F627]
gi|452130686|ref|ZP_21943258.1| riboflavin biosynthesis protein [Bordetella holmesii H558]
gi|451920611|gb|EMD70757.1| riboflavin biosynthesis protein [Bordetella holmesii H558]
gi|451922410|gb|EMD72555.1| riboflavin biosynthesis protein [Bordetella holmesii F627]
Length = 424
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ I +SPNPRVGCVIV++ +++ G T+ GG HAE+ AL A A G+D+
Sbjct: 54 MRRALELARGVIYTTSPNPRVGCVIVRDGQVLGEGATQPAGGPHAEVMALRAAQAGGHDL 113
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TV++TLEPCS++G TPPC +AL+ + +V++A+ DPNP V+G+G A+L +AGI+V
Sbjct: 114 AGATVFVTLEPCSHYGRTPPCVDALVAAAPARVVVALGDPNPRVAGQGFARLRAAGIAVT 173
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++EA +N GF +RM R PW+ +K+A+SLD +++L+N SQWIT + +R D H W
Sbjct: 174 SGICEQEALALNAGFVARMSRATPWLWLKLAASLDGRSALHNGVSQWITGEAARADGHAW 233
Query: 180 RARSCAILTG 189
RAR+ +LTG
Sbjct: 234 RARADVVLTG 243
>gi|339481683|ref|YP_004693469.1| riboflavin biosynthesis protein RibD [Nitrosomonas sp. Is79A3]
gi|338803828|gb|AEJ00070.1| riboflavin biosynthesis protein RibD [Nitrosomonas sp. Is79A3]
Length = 363
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 135/190 (71%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+ + +++PNPRVGCV+V+ ++I+ G+ + G HAEI+AL NA A
Sbjct: 10 MSHALRLAEKGLYSTAPNPRVGCVLVRNEQIVGSGWHEKAGRPHAEINALNNAKAA---A 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC +FG TPPC ALI +GI VIIA+ DPNP+VSG+G A L +GI+V+
Sbjct: 67 RGATAYVTLEPCGHFGRTPPCVSALIAAGIANVIIAMEDPNPIVSGRGKALLEQSGIAVQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N+GF +RM PWVR+K A SLD KT+L N SQWIT + +R D H W
Sbjct: 127 TGLLEAEARALNVGFIARMVDKKPWVRLKTAVSLDGKTALKNGVSQWITGEAARQDGHRW 186
Query: 180 RARSCAILTG 189
RARSCAI+TG
Sbjct: 187 RARSCAIMTG 196
>gi|117919545|ref|YP_868737.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella sp. ANA-3]
gi|117611877|gb|ABK47331.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella sp. ANA-3]
Length = 381
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 11 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GELA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V G+G+ L AGI V
Sbjct: 68 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVD 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+PWV +K+A+SLD KT+L N S+WIT E+R D
Sbjct: 128 VGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKTALSNGVSKWITGPEARRDVQRL 187
Query: 180 RARSCAILTG 189
R R+CA++TG
Sbjct: 188 RLRACALVTG 197
>gi|313200621|ref|YP_004039279.1| riboflavin biosynthesis protein ribd [Methylovorus sp. MP688]
gi|312439937|gb|ADQ84043.1| riboflavin biosynthesis protein RibD [Methylovorus sp. MP688]
Length = 368
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A+ + ++PNPRVGCVIVK+ +I+ G G HAE+ AL A AQG
Sbjct: 10 MARALRLAEQGLYTTTPNPRVGCVIVKDGQIVGEGAHLKAGEPHAEVHALRQAGDLAQGA 69
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
D Y +TLEPCS+ G TPPC +ALIK+G+K+V+ A+ DPNP V+G G+ +L + GI+
Sbjct: 70 DAY-----VTLEPCSHHGRTPPCADALIKAGVKRVVAAMQDPNPQVAGSGLQRLQAQGIA 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ GL++ +A +N GF SRM R P+VR KIA+SLD T+L N SQWIT E+R D
Sbjct: 125 VQSGLLEAQARSLNAGFISRMTRRRPFVRSKIAASLDGATALQNGISQWITGPEARKDVQ 184
Query: 178 IWRARSCAILTG 189
WRA+SC +LTG
Sbjct: 185 HWRAQSCVMLTG 196
>gi|345873177|ref|ZP_08825095.1| riboflavin biosynthesis protein RibD [Thiorhodococcus drewsii AZ1]
gi|343917480|gb|EGV28280.1| riboflavin biosynthesis protein RibD [Thiorhodococcus drewsii AZ1]
Length = 381
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+L + PNPRVGCV+V+E RI+ G+ + G HAE AL A G +
Sbjct: 15 MARAIRLARLGRFTTDPNPRVGCVLVREGRIVGEGWHRWAGEAHAERHALAQA---GAEA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPC + G TPPC +AL+++G+ +V+ A+ DPNPLVSGKG+A+L AGI
Sbjct: 72 CGATVYVTLEPCCHHGRTPPCADALVEAGVARVVCAMVDPNPLVSGKGLARLKDAGIETL 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF R++RG P+VR K+A+SLD +T++ + SQWI+S ESR D +
Sbjct: 132 NGVLEAEARALNPGFIKRLERGRPYVRCKMAASLDGRTAMADGESQWISSPESRRDVQLL 191
Query: 180 RARSCAILTG 189
RA S AILTG
Sbjct: 192 RAGSSAILTG 201
>gi|124268129|ref|YP_001022133.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Methylibium petroleiphilum PM1]
gi|124260904|gb|ABM95898.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Methylibium petroleiphilum PM1]
Length = 377
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 130/193 (67%), Gaps = 6/193 (3%)
Query: 3 LALQQAKLSIN-SSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
LAL+ A +I S PNPRVGCVI + R+++ G+T+ G HAE+ AL A A G+ V
Sbjct: 11 LALRNANEAIGLSDPNPRVGCVITAPDGRLLASGHTQRAGSAHAEVSALRAAQAAGHTVR 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK- 119
T ++TLEPCS+ G TPPC +AL+++G+ V++A+ DPNPLV+G G+ +L +AGI V
Sbjct: 71 GGTAWVTLEPCSHHGRTPPCCDALVEAGVAHVMVALQDPNPLVAGHGIGRLRAAGIDVTV 130
Query: 120 ---QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDS 176
+ A E+NIGF SRM R PWVR+KIA+SLD +T+L N SQWIT +R D
Sbjct: 131 LAPGDPVAIAARELNIGFLSRMLRQRPWVRLKIAASLDGRTALDNGLSQWITGDAARTDG 190
Query: 177 HIWRARSCAILTG 189
H +R R+ A+LTG
Sbjct: 191 HAYRKRAGAVLTG 203
>gi|416174169|ref|ZP_11609130.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
OX99.30304]
gi|433465800|ref|ZP_20423271.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM422]
gi|433491173|ref|ZP_20448286.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM418]
gi|325129557|gb|EGC52381.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
OX99.30304]
gi|432200896|gb|ELK56984.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM422]
gi|432225732|gb|ELK81472.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM418]
Length = 369
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L SAGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLESAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|77165491|ref|YP_344016.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani ATCC
19707]
gi|254433444|ref|ZP_05046952.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani AFC27]
gi|76883805|gb|ABA58486.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrosococcus
oceani ATCC 19707]
gi|207089777|gb|EDZ67048.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani AFC27]
Length = 365
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCV+V+ I+ G+ + G +HAEI+AL A G
Sbjct: 1 MARALKLAQRGLFTTDPNPRVGCVLVRGGEIVGEGWHQQAGDSHAEINALRQA---GIRA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST Y+TLEPC + G TPPCTEALI++G+ +V+ A+ DP+P V+ +G+AQL AG+ V+
Sbjct: 58 QGSTCYVTLEPCCHRGRTPPCTEALIEAGVVRVVAAMGDPHPKVASQGLAQLREAGLQVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q+EA +N+GF R+ +G PWVR K+A SLD T+L + S+WIT+ +R D W
Sbjct: 118 HGLLQEEAQALNVGFVQRLVQGRPWVRCKLAMSLDGATALASGESRWITASPARRDVQRW 177
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 178 RARSSAILTG 187
>gi|114046668|ref|YP_737218.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella sp. MR-7]
gi|113888110|gb|ABI42161.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella sp. MR-7]
Length = 381
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 11 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GELA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V G+G+ L AGI V
Sbjct: 68 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIQVD 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+PWV +K+A+SLD KT+L N S+WIT E+R D
Sbjct: 128 VGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKTALSNGVSKWITGPEARRDVQRL 187
Query: 180 RARSCAILTG 189
R R+CA++TG
Sbjct: 188 RIRACALVTG 197
>gi|433537306|ref|ZP_20493802.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 77221]
gi|432271729|gb|ELL26851.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 77221]
Length = 369
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLAMLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|421559796|ref|ZP_16005664.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 92045]
gi|402334562|gb|EJU69846.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 92045]
Length = 369
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M ALQ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALQLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|389795901|ref|ZP_10199009.1| riboflavin biosynthesis protein RibD [Rhodanobacter fulvus Jip2]
gi|388430084|gb|EIL87289.1| riboflavin biosynthesis protein RibD [Rhodanobacter fulvus Jip2]
Length = 400
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + ++PNPRVGCVI ++ G+ + G HAE+ AL A G
Sbjct: 13 MAHALRLAERGLYTTAPNPRVGCVIAHGDEVVGTGFHQRAGEPHAEVYALREA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC +ALI +G+ +V++A DP V G+GV++L +AGI+V+
Sbjct: 70 RGATAYVTLEPCAHHGRTPPCADALIAAGVGRVVVAAEDPFDQVDGRGVSRLRAAGIAVE 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM++ A E+NIGFFSR++RG P+VR+K+A SLD +T+L N S+WIT + +R D W
Sbjct: 130 TGLMREAARELNIGFFSRIERGRPFVRVKLAMSLDGRTALANGDSKWITGEAARADVQRW 189
Query: 180 RARSCAILTG 189
RARS AIL+G
Sbjct: 190 RARSSAILSG 199
>gi|410638137|ref|ZP_11348702.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
lipolytica E3]
gi|410142334|dbj|GAC15907.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
lipolytica E3]
Length = 373
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRII-SCGYTKSPGGNHAEIDALLNAAAQGYD 58
M++AL+ AK +SPNP VGCVI + +I G+ G HAE+ AL A G
Sbjct: 14 MSIALKLAKKGQYTTSPNPNVGCVIADDNGVILGQGWHHKAGTPHAEVHALAQA---GTL 70
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPCS+FG TPPC +ALI++G+K+V+ A+ DPNP VSG G+ +L GISV
Sbjct: 71 SSGATAYVTLEPCSHFGRTPPCADALIQAGVKRVVAAMVDPNPTVSGNGLKRLAEHGISV 130
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
GLM+++A ++N GF RM G+PWV +K+A+SLD KT+L N +SQWITS +R D I
Sbjct: 131 SHGLMREQAQQLNRGFIKRMTLGLPWVTVKLAASLDGKTALANGTSQWITSPAARTDVQI 190
Query: 179 WRARSCAILTG 189
RA+SCAIL+G
Sbjct: 191 QRAKSCAILSG 201
>gi|218767600|ref|YP_002342112.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/phosphoribosylamino)uracil reductase
[Neisseria meningitidis Z2491]
gi|433480405|ref|ZP_20437687.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 63041]
gi|433520485|ref|ZP_20477197.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 65014]
gi|433541725|ref|ZP_20498168.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 63006]
gi|121051608|emb|CAM07908.1| putative diaminohydroxyphosphoribosylaminopyrimidine
deaminase/phosphoribosylamino)uracil reductase
[Neisseria meningitidis Z2491]
gi|432214176|gb|ELK70082.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 63041]
gi|432252151|gb|ELL07509.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 65014]
gi|432275928|gb|ELL30993.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 63006]
Length = 369
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLAMLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|421563910|ref|ZP_16009722.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM2795]
gi|421906292|ref|ZP_16336192.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Neisseria meningitidis alpha704]
gi|393292593|emb|CCI72111.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Neisseria meningitidis alpha704]
gi|402339529|gb|EJU74743.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM2795]
Length = 369
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALHQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
ST ++TLEPCS++G TPPC EAL++SG+ +V++A+ DPNPLV+GKG+A L AGI
Sbjct: 69 ----STAFVTLEPCSHYGRTPPCAEALLRSGVTRVVVAMRDPNPLVAGKGLALLEVAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|375111196|ref|ZP_09757407.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella jeotgali KCTC 22429]
gi|374568738|gb|EHR39910.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella jeotgali KCTC 22429]
Length = 382
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VG ++VK+ +++ G+ + GG HAE+ AL A G +T Y+TLEPC
Sbjct: 23 FTTDPNPNVGALVVKDGQVLGEGFHQQAGGPHAEVFALQQA---GSAARGATCYVTLEPC 79
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
+++G TPPC EAL+K+G+ +V+IA+ DPNPLV+GKGVA L AGISV GL+ +EA +N
Sbjct: 80 AHYGRTPPCAEALVKAGVARVVIAMLDPNPLVAGKGVAILQQAGISVAHGLLTEEARALN 139
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF SRM+R P++ +K+A+SLD +T+L N SQW+TS +R D +WRA+ AIL+
Sbjct: 140 PGFLSRMERQRPYLYLKLAASLDGRTALANGQSQWLTSDAARADVQLWRAQVSAILS 196
>gi|359451174|ref|ZP_09240585.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20480]
gi|358043028|dbj|GAA76834.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20480]
Length = 383
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK+ +II G+ + G HAE++AL A G
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKDNQIIGEGFHQLAGQGHAEVNAL---AVAGEKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +GIKKVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 KGATAYVTLEPCSHYGRTPPCAEGLKAAGIKKVIAAMVDTNPQVAGKGLKILSDAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA +N GFF RM++G+P+V K+A+S+D KT+L N S+WIT +R D ++
Sbjct: 132 HGLLEQEARALNFGFFKRMEQGLPYVTCKLAASIDGKTALKNGKSKWITGPAARKDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|300113757|ref|YP_003760332.1| riboflavin biosynthesis protein RibD [Nitrosococcus watsonii C-113]
gi|299539694|gb|ADJ28011.1| riboflavin biosynthesis protein RibD [Nitrosococcus watsonii C-113]
Length = 371
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCV+V+ I+ G+ + G +HAEI+AL A G
Sbjct: 7 MVRALKLAQRGLFTTDPNPRVGCVLVRGGEIVGEGWHQQAGDSHAEINALRQA---GIRA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST Y+TLEPC + G TPPCTEALI++G+ +V+ A+ DP+P V+ +G+AQL AG+ V+
Sbjct: 64 QGSTCYVTLEPCCHRGRTPPCTEALIEAGVARVVAAMGDPHPKVASQGLAQLREAGLQVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q+EA +N+GF R+ +G PWVR K+A SLD T+L + S+WIT+ +R D W
Sbjct: 124 HGLLQEEAEALNVGFVQRLVQGRPWVRCKLAMSLDGATALASGESRWITASPARRDVQRW 183
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 184 RARSSAILTG 193
>gi|92114703|ref|YP_574631.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Chromohalobacter salexigens DSM 3043]
gi|91797793|gb|ABE59932.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Chromohalobacter salexigens DSM 3043]
Length = 380
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + PNPRVGCV+V RI+ GY GG HAE+ AL A G
Sbjct: 10 MARALQLARHGCYTTHPNPRVGCVVVNAGRIVGEGYHAYAGGPHAEVHALREA---GDAA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +ALI +G+++V++A+ DPNP V+G+GVA L AGI V
Sbjct: 67 AGATVYVTLEPCSHHGRTPPCAQALIDAGVRRVVVAMVDPNPQVAGRGVAMLREAGIEVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ +A +N+GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R +
Sbjct: 127 VGLLATDAEALNVGFVKRMRDGLPFVRLKMAMSLDGRTAMASGESQWITGASARTEVQRL 186
Query: 180 RARSCAILTGKN 191
RAR+ A++TG +
Sbjct: 187 RARASAVMTGVD 198
>gi|385341332|ref|YP_005895203.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M01-240149]
gi|325201538|gb|ADY96992.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M01-240149]
Length = 369
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI + +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|296314604|ref|ZP_06864545.1| riboflavin biosynthesis protein RibD [Neisseria polysaccharea ATCC
43768]
gi|296838643|gb|EFH22581.1| riboflavin biosynthesis protein RibD [Neisseria polysaccharea ATCC
43768]
Length = 369
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A L ++SPNPRVGCVI + +++ G+ G HAE+ AL A G
Sbjct: 10 MQNALDLAALGRFSTSPNPRVGCVIAQGGQVVGQGFHIKAGEPHAEVHALRQA---GKMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI ++
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIKME 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLESEAKELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|385329063|ref|YP_005883366.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
alpha710]
gi|385856630|ref|YP_005903142.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NZ-05/33]
gi|416189031|ref|ZP_11615047.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M0579]
gi|308389915|gb|ADO32235.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
alpha710]
gi|325135601|gb|EGC58218.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M0579]
gi|325207519|gb|ADZ02971.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NZ-05/33]
Length = 369
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI + +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|24374975|ref|NP_719018.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase RibD [Shewanella oneidensis MR-1]
gi|24349701|gb|AAN56462.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase RibD [Shewanella oneidensis MR-1]
Length = 381
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIV + +I+ GY + G HAE+ AL A G
Sbjct: 11 MSRAIQLARKGFYTTRPNPSVGCVIVNDNQIVGEGYHQKAGEPHAEVHALRMA---GELA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V G+G+ L AGI V
Sbjct: 68 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIQVD 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+PWV +K+A+SLD KT+L N S+WIT E+R D
Sbjct: 128 VGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKTALSNGVSKWITGPEARRDVQRL 187
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 188 RLRSCALITG 197
>gi|433522551|ref|ZP_20479234.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 61103]
gi|432257740|gb|ELL13034.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 61103]
Length = 369
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALHQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L SAGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLESAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D +
Sbjct: 127 CGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|416207536|ref|ZP_11620934.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
961-5945]
gi|416207613|ref|ZP_11620953.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
961-5945]
gi|416207665|ref|ZP_11620971.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
961-5945]
gi|325141619|gb|EGC64081.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
961-5945]
gi|325141652|gb|EGC64113.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
961-5945]
gi|325141685|gb|EGC64145.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
961-5945]
Length = 369
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALHQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLAMLEAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D +
Sbjct: 127 CGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|217972396|ref|YP_002357147.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS223]
gi|217497531|gb|ACK45724.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS223]
Length = 384
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GEHA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V+G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|373950496|ref|ZP_09610457.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS183]
gi|386323668|ref|YP_006019785.1| riboflavin biosynthesis protein RibD [Shewanella baltica BA175]
gi|333817813|gb|AEG10479.1| riboflavin biosynthesis protein RibD [Shewanella baltica BA175]
gi|373887096|gb|EHQ15988.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS183]
Length = 384
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GEHA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V+G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|126175361|ref|YP_001051510.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS155]
gi|386342107|ref|YP_006038473.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS117]
gi|125998566|gb|ABN62641.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella baltica OS155]
gi|334864508|gb|AEH14979.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS117]
Length = 384
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GEHA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V+G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|418025467|ref|ZP_12664445.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS625]
gi|353535079|gb|EHC04643.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS625]
Length = 384
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GEHA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V+G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|261381200|ref|ZP_05985773.1| riboflavin biosynthesis protein RibD [Neisseria subflava NJ9703]
gi|284795821|gb|EFC51168.1| riboflavin biosynthesis protein RibD [Neisseria subflava NJ9703]
Length = 372
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AKL ++SPNPRVGCVI +I+ G+ G HAE+ AL A A
Sbjct: 10 MQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFHVKAGEPHAEVHALRQAGAA---A 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+ SG+ +V+ A+ DPNPLVSGKG++ L +AGI +
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVSGKGLSMLEAAGIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++RG P+VR+K A+SLD KT+L + S WIT + +R D I
Sbjct: 127 SGLLEAQARELNRGFLSRIERGRPFVRLKCAASLDGKTALSDGRSFWITGEAAREDVQIL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|421541112|ref|ZP_15987242.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 93004]
gi|433467860|ref|ZP_20425309.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 87255]
gi|402315905|gb|EJU51459.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 93004]
gi|432201412|gb|ELK57493.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 87255]
Length = 369
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTTLSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|50083525|ref|YP_045035.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acinetobacter sp. ADP1]
gi|49529501|emb|CAG67213.1| bifunctional protein [Includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase) ] [Acinetobacter sp. ADP1]
Length = 362
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL AK + + PNP VGCVIVK++ I+ G T GG HAE+ AL A Q
Sbjct: 11 MSQALALAKTAQFRTRPNPAVGCVIVKDQHIVGRGSTAPVGGPHAEVFALREAGVQAQ-- 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+T Y+TLEPCS++G TPPC ALI++G+ +V+IA DPNPLV+GKG L AGI+ +
Sbjct: 69 -NATAYVTLEPCSHYGRTPPCANALIEAGVSRVVIATLDPNPLVAGKGQTMLNQAGITTQ 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++++A E+N GF M G+P+VR+K+ASSLD +T++ + S+WIT ++R D W
Sbjct: 128 VGVLEEQAQELNRGFLKVMAGGLPYVRLKVASSLDGRTAMASGESKWITGVDARLDVQYW 187
Query: 180 RARSCAILTGKN 191
RARS AI+TG +
Sbjct: 188 RARSGAIITGVD 199
>gi|393762569|ref|ZP_10351196.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella agri BL06]
gi|392606804|gb|EIW89688.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella agri BL06]
Length = 382
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VG ++VK+ +++ G+ + GG HAE+ AL A G +T Y+TLEPC
Sbjct: 23 FTTDPNPNVGALVVKDGQVLGEGFHQQAGGPHAEVFALQQA---GSAARGATCYVTLEPC 79
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
+++G TPPC EAL+K+G+ +V+IA+ DPNPLV+GKGVA L AGISV GL+ +EA +N
Sbjct: 80 AHYGRTPPCAEALVKAGVARVVIAMLDPNPLVAGKGVAILQQAGISVAHGLLTEEARALN 139
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF SRM+R P++ +K+A+SLD +T+L N SQW+TS +R D +WRA+ AIL+
Sbjct: 140 PGFLSRMERQRPYLYLKLAASLDGRTALANGQSQWLTSDVARADVQLWRAQVSAILS 196
>gi|392539651|ref|ZP_10286788.1| riboflavin biosynthesis protein [Pseudoalteromonas marina mano4]
Length = 383
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK+ +II G+ + G HAE++AL A G
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKDNQIIGEGFHQLAGQGHAEVNAL---AVAGEKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +GIKKVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 QGATAYVTLEPCSHYGRTPPCAEGLKAAGIKKVIAAMVDTNPQVAGKGLKILSDAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GFF RM++G+P+V K+A+S+D KT+L N S+WIT +R D ++
Sbjct: 132 HGLLEHEARALNFGFFKRMEQGLPYVTCKLAASIDGKTALKNGKSKWITGPAARKDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|153001671|ref|YP_001367352.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS185]
gi|151366289|gb|ABS09289.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS185]
Length = 384
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GEHA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V+G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCAFALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|433469946|ref|ZP_20427354.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 98080]
gi|432201539|gb|ELK57619.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 98080]
Length = 369
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTTLSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|421568305|ref|ZP_16014031.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM3001]
gi|402342033|gb|EJU77204.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM3001]
Length = 369
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +++ G+ G HAE+ AL A AQG
Sbjct: 10 METALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGEPHAEVHALHQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|416184651|ref|ZP_11613085.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M13399]
gi|421543058|ref|ZP_15989158.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM255]
gi|421557764|ref|ZP_16003662.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 80179]
gi|325133593|gb|EGC56254.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M13399]
gi|402315820|gb|EJU51376.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM255]
gi|402333639|gb|EJU68939.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 80179]
Length = 369
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +++ G+ G HAE+ AL A AQG
Sbjct: 10 METALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGEPHAEVHALHQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|385324768|ref|YP_005879207.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase)] [Neisseria meningitidis 8013]
gi|261393155|emb|CAX50767.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase)] [Neisseria meningitidis 8013]
Length = 369
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MQNALKLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|118595047|ref|ZP_01552394.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Methylophilales bacterium HTCC2181]
gi|118440825|gb|EAV47452.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Methylophilales bacterium HTCC2181]
Length = 363
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ AK + + PNP VG + VK+ +I G+ G +HAE+ AL A G
Sbjct: 10 MALAISLAKQGLGKTQPNPVVGAIAVKDSVVIGSGFHAKAGKDHAEVLALKEA---GAGA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+YITLEPC + G TPPC + ++ SG+ KV++A +DPNPLV+GKG+A L S GI V
Sbjct: 67 KGSTLYITLEPCGHVGKTPPCVDLILSSGVTKVVVASSDPNPLVNGKGLAVLRSHGIEVV 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+ +++ +A +N GFFSRM + +P+VR KIASS+D +T+L N SQWITS+ SR D W
Sbjct: 127 EDVLRLQAEALNTGFFSRMTKNLPYVRSKIASSIDGRTALANGDSQWITSEASRQDVQQW 186
Query: 180 RARSCAILTG 189
RAR+CAILTG
Sbjct: 187 RARACAILTG 196
>gi|120598057|ref|YP_962631.1| riboflavin biosynthesis protein RibD [Shewanella sp. W3-18-1]
gi|120558150|gb|ABM24077.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella sp. W3-18-1]
Length = 384
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +II GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGEPHAEVHALRMA---GERA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|146293872|ref|YP_001184296.1| riboflavin biosynthesis protein RibD [Shewanella putrefaciens
CN-32]
gi|145565562|gb|ABP76497.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella putrefaciens CN-32]
Length = 384
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +II GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGEPHAEVHALRMA---GERA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|350571008|ref|ZP_08939348.1| riboflavin biosynthesis protein RibD [Neisseria wadsworthii 9715]
gi|349793788|gb|EGZ47616.1| riboflavin biosynthesis protein RibD [Neisseria wadsworthii 9715]
Length = 368
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 126/180 (70%), Gaps = 7/180 (3%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGYDVYNSTVYITLE 69
++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG +T Y+TLE
Sbjct: 22 FSTSPNPRVGCVIAHGDQIVGQGFHIRAGSPHAEVYALQQAGKLAQG-----ATAYVTLE 76
Query: 70 PCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYE 129
PCS+ G TPPC EALIK+ +K+V+ A+ DPNPLVSGKG+ L +GI + GL++++A
Sbjct: 77 PCSHHGRTPPCAEALIKAKVKRVVAAMTDPNPLVSGKGLTLLTQSGIQTESGLLEQKARL 136
Query: 130 INIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
+N GF SR++RG P++R+K A+SLD KT+L N SQWIT + +R+D I RA SCA+LTG
Sbjct: 137 LNRGFLSRIERGRPFIRLKCAASLDGKTALSNGQSQWITGEAARSDVQILRAESCAVLTG 196
>gi|385855832|ref|YP_005902345.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M01-240355]
gi|325204773|gb|ADZ00227.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M01-240355]
Length = 361
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 60
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 61 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEAAGIK 116
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 117 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTTLSDGSSFWITGEDARADVQ 176
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 177 VLRAESCAVLTG 188
>gi|386314619|ref|YP_006010784.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase, RibD [Shewanella putrefaciens 200]
gi|319427244|gb|ADV55318.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase, RibD [Shewanella putrefaciens 200]
Length = 384
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +II GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGEPHAEVHALRMA---GERA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|294141969|ref|YP_003557947.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12]
gi|293328438|dbj|BAJ03169.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12]
Length = 379
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 129/192 (67%), Gaps = 3/192 (1%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYD- 58
M+ A++ A+ + + PNP VGCVI + +I+ G+ GG HAE+ AL A +
Sbjct: 10 MSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFHIQAGGPHAEVHALAMATKRASQA 69
Query: 59 -VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+ +T Y+TLEPCS++G TPPC EALIK GI +V++A+ DPNP VSG+G+ L AGI
Sbjct: 70 ALKGATAYVTLEPCSHYGRTPPCAEALIKHGISRVVVAVEDPNPQVSGRGIKMLRDAGIE 129
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V GL+ EA IN GF RM+RG+PWV +K+ASSLD KT+L N +S+WIT ESR D
Sbjct: 130 VDVGLLSDEAAGINPGFMKRMERGLPWVTVKLASSLDGKTALSNGASKWITGPESRRDVQ 189
Query: 178 IWRARSCAILTG 189
RAR+ A++TG
Sbjct: 190 RLRARNEALVTG 201
>gi|254804368|ref|YP_003082589.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
phosphoribosylamino uracil reductase [Neisseria
meningitidis alpha14]
gi|254667910|emb|CBA04065.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
phosphoribosylamino uracil reductase [Neisseria
meningitidis alpha14]
Length = 369
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +++ G+ G HAE+ AL A AQG
Sbjct: 10 METALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGEPHAEVHALHQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|296387387|ref|ZP_06876886.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAb1]
Length = 373
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|254242738|ref|ZP_04936060.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
2192]
gi|126196116|gb|EAZ60179.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
2192]
Length = 373
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|15599251|ref|NP_252745.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAO1]
gi|418584559|ref|ZP_13148620.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418593656|ref|ZP_13157492.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
MPAO1/P2]
gi|421518605|ref|ZP_15965279.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAO579]
gi|9950253|gb|AAG07443.1|AE004822_3 riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAO1]
gi|375045781|gb|EHS38356.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375046811|gb|EHS39366.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
MPAO1/P2]
gi|404348087|gb|EJZ74436.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAO579]
Length = 373
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|421178771|ref|ZP_15636374.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa E2]
gi|404547869|gb|EKA56849.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa E2]
Length = 373
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|397169883|ref|ZP_10493310.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella aestuarii B11]
gi|396088411|gb|EJI85994.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella aestuarii B11]
Length = 382
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 128/179 (71%), Gaps = 7/179 (3%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNA--AAQGYDVYNSTVYITLE 69
+ PNP VG ++VK+ +++ G+ + GG HAE+ AL A AA+G +T Y+TLE
Sbjct: 23 FTTDPNPNVGALVVKDGQVLGEGFHQQAGGPHAEVFALQQADSAARG-----ATCYVTLE 77
Query: 70 PCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYE 129
PC+++G TPPC EAL+K+G+ +V+IA+ DPNPLV+GKGVA L AGISV GL+ +EA
Sbjct: 78 PCAHYGRTPPCAEALVKAGVARVVIAMLDPNPLVAGKGVAILQQAGISVAHGLLTEEARA 137
Query: 130 INIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
+N GF SRM+R P++ +K+A+SLD +T+L N SQW+TS +R D +WRA+ AIL+
Sbjct: 138 LNPGFLSRMERQRPYLYLKLAASLDGRTALANGQSQWLTSDAARADVQLWRAQVSAILS 196
>gi|116052093|ref|YP_789063.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421172675|ref|ZP_15630440.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
CI27]
gi|115587314|gb|ABJ13329.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404537365|gb|EKA46968.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
CI27]
Length = 373
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|107103570|ref|ZP_01367488.1| hypothetical protein PaerPA_01004640 [Pseudomonas aeruginosa PACS2]
gi|218889663|ref|YP_002438527.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
LESB58]
gi|386056951|ref|YP_005973473.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
M18]
gi|392982217|ref|YP_006480804.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
DK2]
gi|416867151|ref|ZP_11916027.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
138244]
gi|420137628|ref|ZP_14645593.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
CIG1]
gi|421151999|ref|ZP_15611591.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
ATCC 14886]
gi|421158064|ref|ZP_15617362.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
ATCC 25324]
gi|424939065|ref|ZP_18354828.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
NCMG1179]
gi|451982967|ref|ZP_21931264.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas aeruginosa 18A]
gi|218769886|emb|CAW25647.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
LESB58]
gi|334833753|gb|EGM12796.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
138244]
gi|346055511|dbj|GAA15394.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
NCMG1179]
gi|347303257|gb|AEO73371.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
M18]
gi|392317722|gb|AFM63102.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
DK2]
gi|403249604|gb|EJY63095.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
CIG1]
gi|404526131|gb|EKA36363.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
ATCC 14886]
gi|404550000|gb|EKA58808.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
ATCC 25324]
gi|451759335|emb|CCQ83787.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas aeruginosa 18A]
gi|453043270|gb|EME91002.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PA21_ST175]
Length = 373
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|355639264|ref|ZP_09051066.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. 2_1_26]
gi|354832119|gb|EHF16120.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. 2_1_26]
Length = 373
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|238023203|ref|ZP_04603629.1| hypothetical protein GCWU000324_03130 [Kingella oralis ATCC 51147]
gi|237865586|gb|EEP66726.1| hypothetical protein GCWU000324_03130 [Kingella oralis ATCC 51147]
Length = 359
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL A + ++SPNPRVGCVI +I+ GY G HAE+ AL A G
Sbjct: 12 MQLALALAWQGRFSTSPNPRVGCVIAHGSQIVGQGYHVQAGAPHAEVHALAQA---GALA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L AG
Sbjct: 69 RGATAYVTLEPCAHHGRTPPCAEALVRAGVSRVVAAMQDPNPLVAGKGLAILRQAGTQTA 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EA +N GF SR++R P+V++KIA+SLD KT+L N +SQWIT + +R D I
Sbjct: 129 SGLCEAEARALNRGFLSRIERQRPFVKLKIAASLDGKTALANGASQWITGEAARADVQIQ 188
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 189 RAESCAVLTG 198
>gi|269213784|ref|ZP_05982845.2| riboflavin biosynthesis protein RibD [Neisseria cinerea ATCC 14685]
gi|269145361|gb|EEZ71779.1| riboflavin biosynthesis protein RibD [Neisseria cinerea ATCC 14685]
Length = 361
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 2 MHQALDLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 60
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC +ALI++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 61 ----ATAFVTLEPCSHYGRTPPCAKALIQAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 116
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WITS+E+R D
Sbjct: 117 TECGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITSEEARADVQ 176
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 177 VLRAESCAVLTG 188
>gi|385853875|ref|YP_005900389.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
H44/76]
gi|427827734|ref|ZP_18994758.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
H44/76]
gi|316984420|gb|EFV63393.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
H44/76]
gi|325200879|gb|ADY96334.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
H44/76]
Length = 361
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 60
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 61 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 116
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 117 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 176
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 177 VLRAESCAVLTG 188
>gi|15677653|ref|NP_274814.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis MC58]
gi|416198483|ref|ZP_11618959.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis CU385]
gi|433488984|ref|ZP_20446134.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M13255]
gi|433505607|ref|ZP_20462540.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 9506]
gi|433507806|ref|ZP_20464704.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 9757]
gi|433510023|ref|ZP_20466880.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 12888]
gi|433512011|ref|ZP_20468826.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 4119]
gi|7227070|gb|AAF42152.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis MC58]
gi|325139638|gb|EGC62177.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis CU385]
gi|432221313|gb|ELK77124.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M13255]
gi|432239360|gb|ELK94914.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 9757]
gi|432239494|gb|ELK95046.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 9506]
gi|432244961|gb|ELL00440.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 12888]
gi|432245557|gb|ELL01025.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 4119]
Length = 369
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|421538780|ref|ZP_15984952.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 93003]
gi|402315487|gb|EJU51050.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 93003]
Length = 369
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|241759512|ref|ZP_04757616.1| riboflavin biosynthesis protein RibD [Neisseria flavescens SK114]
gi|241320294|gb|EER56627.1| riboflavin biosynthesis protein RibD [Neisseria flavescens SK114]
Length = 367
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AKL ++SPNPRVGCVI +I+ G+ G HAE+ AL A A
Sbjct: 10 MQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFHVKAGEPHAEVHALRQAGAA---A 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+ SG+ +V+ A+ DPNPLV+GKG++ L +AGI +
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVAGKGLSMLEAAGIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++RG P+VR+K A+SLD KT+L + S WIT + +R D I
Sbjct: 127 SGLLEAQARELNRGFLSRIERGRPFVRLKCAASLDGKTALSDGRSFWITGEAAREDVQIL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|225077298|ref|ZP_03720497.1| hypothetical protein NEIFLAOT_02357 [Neisseria flavescens
NRL30031/H210]
gi|224951442|gb|EEG32651.1| hypothetical protein NEIFLAOT_02357 [Neisseria flavescens
NRL30031/H210]
Length = 370
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AKL ++SPNPRVGCVI +I+ G+ G HAE+ AL A A
Sbjct: 10 MQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFHVKAGEPHAEVHALRQAGAA---A 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+ SG+ +V+ A+ DPNPLV+GKG++ L +AGI +
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVAGKGLSMLEAAGIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++RG P+VR+K A+SLD KT+L + S WIT + +R D I
Sbjct: 127 SGLLEAQARELNRGFLSRIERGRPFVRLKCAASLDGKTALSDGRSFWITGEAARKDVQIL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|421566162|ref|ZP_16011920.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM3081]
gi|389606505|emb|CCA45418.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Neisseria meningitidis alpha522]
gi|402340918|gb|EJU76106.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM3081]
Length = 369
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|313109499|ref|ZP_07795455.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
39016]
gi|386068158|ref|YP_005983462.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
NCGM2.S1]
gi|310881957|gb|EFQ40551.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
39016]
gi|348036717|dbj|BAK92077.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
NCGM2.S1]
Length = 373
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 133/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVGGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|416164232|ref|ZP_11607164.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis N1568]
gi|433474132|ref|ZP_20431488.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 97021]
gi|433481507|ref|ZP_20438774.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2006087]
gi|433484569|ref|ZP_20441788.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2002038]
gi|433485548|ref|ZP_20442751.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 97014]
gi|325127564|gb|EGC50487.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis N1568]
gi|432208011|gb|ELK63993.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 97021]
gi|432218264|gb|ELK74127.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2006087]
gi|432219655|gb|ELK75491.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2002038]
gi|432224037|gb|ELK79810.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 97014]
Length = 369
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL+++G+ +V+ A+ DPNPLV+GKG+A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|359455293|ref|ZP_09244528.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20495]
gi|358047636|dbj|GAA80777.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20495]
Length = 601
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK +II G+ + G HAE++AL A G +
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNQIIGEGFHQLAGQGHAEVNAL---AIAGNNA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L K+G+ KVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 QGATAYVTLEPCSHYGRTPPCAEGLKKAGVVKVIAAMVDTNPQVAGKGLKILSDAGIDVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N+GFF RM++G+P+V K+A+S+D KT+L N S+WITS +R D ++
Sbjct: 132 YGLLESQARALNVGFFKRMEQGLPYVTCKMAASIDGKTALKNGQSKWITSPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAKSCAILTGAD 203
>gi|421856815|ref|ZP_16289174.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|403187717|dbj|GAB75375.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 362
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+L ++ PNP VGCVIVK+ +II GY G HAE+ AL A Q D
Sbjct: 12 MRRAIELARLGQYSTKPNPNVGCVIVKDGQIIGEGYHPRAGQPHAEVFALRQAGEQAQD- 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC EAL+K +KKV+IA DPNPLV+GKG+A L AGI V+
Sbjct: 71 --ATAYVTLEPCAHYGRTPPCAEALVKHQLKKVVIACPDPNPLVAGKGIAILKQAGIDVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ + EA ++N GF M G+P+VR+K+ASSLD +T++ + S+WIT K +R D W
Sbjct: 129 SGICENEAVQLNCGFLKAMAVGMPYVRLKVASSLDGRTAMASGESKWITGKAARQDVQHW 188
Query: 180 RARSCAILTG 189
RA S ++TG
Sbjct: 189 RAISGVVITG 198
>gi|160876409|ref|YP_001555725.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS195]
gi|378709610|ref|YP_005274504.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS678]
gi|160861931|gb|ABX50465.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS195]
gi|315268599|gb|ADT95452.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS678]
Length = 384
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q A+ + PNP VGCVIVK+ +I+ GY + G HAE+ AL A G
Sbjct: 15 MSRAIQLARKGFYTTRPNPCVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMA---GEHA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI G+K+V++A+ DPNP V G+G+ L AGI V
Sbjct: 72 RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EAY +N+GF RM+ G+P V +K+A+SLD KT+L N S+WIT ESR D
Sbjct: 132 VGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDGKTALSNGVSKWITGPESRRDVQRL 191
Query: 180 RARSCAILTG 189
R RSCA++TG
Sbjct: 192 RLRSCALVTG 201
>gi|416214548|ref|ZP_11622944.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M01-240013]
gi|325143820|gb|EGC66136.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M01-240013]
Length = 370
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 132/192 (68%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALHQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEVAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDTRADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|325266968|ref|ZP_08133639.1| riboflavin biosynthesis protein RibD [Kingella denitrificans ATCC
33394]
gi|324981709|gb|EGC17350.1| riboflavin biosynthesis protein RibD [Kingella denitrificans ATCC
33394]
Length = 369
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++SPNPRVGCVI +I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 28 FSTSPNPRVGCVIAHGGQIVGQGFHVQAGFPHAEVHALRQA---GDLARGATAYVTLEPC 84
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC E LI +G+ +V+IA+ DPNPLV+GKG+A L +AGISV+ GL+ EA +N
Sbjct: 85 SHHGRTPPCAEGLIAAGVARVVIAMGDPNPLVAGKGIALLQAAGISVQCGLLADEARALN 144
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SR++R P+V +KIA+SLD KT L + SQWIT +E+R D RA+SCA+LTG
Sbjct: 145 RGFLSRIERRRPFVSLKIAASLDGKTGLSDGRSQWITGEEARADVQRQRAQSCAVLTG 202
>gi|255320997|ref|ZP_05362170.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
SK82]
gi|262379913|ref|ZP_06073068.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
SH164]
gi|255301961|gb|EET81205.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
SK82]
gi|262298107|gb|EEY86021.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
SH164]
Length = 362
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+L ++ PNP VGCVIVK+ +II GY G HAE+ AL A Q D
Sbjct: 12 MRRAIELARLGQYSTKPNPNVGCVIVKDGQIIGEGYHPRAGQPHAEVFALRQAGEQAQD- 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC EAL+K +KKV+IA DPNPLV+GKG+A L AGI V+
Sbjct: 71 --ATAYVTLEPCAHYGRTPPCAEALVKHQLKKVVIACPDPNPLVAGKGIAILKQAGIEVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ + EA ++N GF M G+P+VR+K+ASSLD +T++ + S+WIT K +R D W
Sbjct: 129 SGICENEAAQLNCGFLKAMAVGMPYVRLKVASSLDGRTAMASGESKWITGKAARQDVQHW 188
Query: 180 RARSCAILTG 189
RA S ++TG
Sbjct: 189 RAISGVVITG 198
>gi|85058629|ref|YP_454331.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Sodalis glossinidius str. 'morsitans']
gi|84779149|dbj|BAE73926.1| riboflavin biosynthesis protein RibD [Sodalis glossinidius str.
'morsitans']
Length = 375
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCVIV++ RI+ GY + G HAE+ AL A G +T Y+TLEPC
Sbjct: 20 FTTAPNPNVGCVIVRDGRIVGEGYHQRAGYAHAEVHALRQA---GNAARCATAYVTLEPC 76
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G +L AGI V+ GLM EA +N
Sbjct: 77 SHHGRTPPCADALIDAGVARVVAAMPDPNPQVAGRGFYRLQQAGIEVRHGLMLPEAEAVN 136
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G PWVR+K+A+SLD +T++ + SQWITS E+R D WRA S AIL+
Sbjct: 137 PGFLKRMRTGFPWVRLKLAASLDGRTAMASGESQWITSTEARRDVQRWRAESDAILS 193
>gi|421555520|ref|ZP_16001450.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 98008]
gi|402329757|gb|EJU65111.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 98008]
Length = 369
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 131/192 (68%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 METALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGFAMLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|345877664|ref|ZP_08829405.1| hypothetical protein Rifp1Sym_bb00280 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225335|gb|EGV51697.1| hypothetical protein Rifp1Sym_bb00280 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 373
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + + PNPRVGCV+VK+ +++ G+ + G HAE +AL A G
Sbjct: 10 MARALQLAEKGLYTTHPNPRVGCVLVKDDQVVGEGWHRRAGEPHAERNALAQA---GERA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T YITLEPC + G TPPC++ALI++G+ +V+ A+ DPNPLV+GKG+AQL +AGI+ +
Sbjct: 67 RGATAYITLEPCCHQGRTPPCSDALIEAGVSRVVAAMRDPNPLVAGKGLAQLEAAGIATE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLMQ +A +N GF RM G P++R K+A SLD +T++ + SQWITS+ +R D
Sbjct: 127 YGLMQAQAEALNPGFTKRMAEGRPYIRCKLAMSLDGRTAMASGESQWITSEAARLDVQRL 186
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 187 RARSSAILTG 196
>gi|421464545|ref|ZP_15913235.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
WC-A-157]
gi|400205298|gb|EJO36279.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
WC-A-157]
Length = 351
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+L ++ PNP VGCVIVK+ +II GY G HAE+ AL A Q D
Sbjct: 1 MRRAIELARLGQYSTKPNPNVGCVIVKDGQIIGEGYHPRAGQPHAEVFALRQAGEQAQD- 59
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC EAL+K +KKV+IA DPNPLV+GKG+A L AGI V+
Sbjct: 60 --ATAYVTLEPCAHYGRTPPCAEALVKHQLKKVVIACPDPNPLVAGKGIAILKQAGIEVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ + EA +N GF M G+P+VR+K+ASSLD +T++ + S+WIT K +R D W
Sbjct: 118 SGICENEAVRLNCGFLKAMAVGMPYVRLKVASSLDGRTAMASGESKWITGKAARQDVQHW 177
Query: 180 RARSCAILTG 189
RA S ++TG
Sbjct: 178 RAISGVVITG 187
>gi|224824436|ref|ZP_03697543.1| riboflavin biosynthesis protein RibD [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602929|gb|EEG09105.1| riboflavin biosynthesis protein RibD [Pseudogulbenkiania
ferrooxidans 2002]
Length = 364
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + ++PNPRVGCV+V++ ++ G+ + G HAE+ AL A G
Sbjct: 11 MAQALRLAEQGLYTTTPNPRVGCVVVRDGEVVGEGWHIAAGTPHAEVHALRMA---GELA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC + LI++G+ +V+ A+ DP V+G+G+ L +AGI V
Sbjct: 68 RGATAYVTLEPCSHYGRTPPCAKGLIEAGVGRVVAAMQDPYHEVAGRGLDMLRAAGIEVA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF SR +RG PWV +K A+SLD KT+L N +SQWIT ++R D H
Sbjct: 128 VGLLEAEARRLNKGFLSRAERGRPWVTLKAAASLDGKTALLNGASQWITGPDARRDVHRL 187
Query: 180 RARSCAILTGKN 191
RARSCAILTG
Sbjct: 188 RARSCAILTGSG 199
>gi|421545125|ref|ZP_15991190.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM140]
gi|421547175|ref|ZP_15993213.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM183]
gi|421548145|ref|ZP_15994173.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM2781]
gi|421553380|ref|ZP_15999343.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM576]
gi|402321538|gb|EJU57011.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM183]
gi|402321808|gb|EJU57280.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM140]
gi|402326867|gb|EJU62265.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM2781]
gi|402328288|gb|EJU63665.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis NM576]
Length = 369
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 132/192 (68%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +++ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGEPHAEVHALHQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEVAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|297538271|ref|YP_003674040.1| riboflavin biosynthesis protein RibD [Methylotenera versatilis 301]
gi|297257618|gb|ADI29463.1| riboflavin biosynthesis protein RibD [Methylotenera versatilis 301]
Length = 370
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
MTLAL+ A+ + + PNPRVGCVIVK +I+ G G HAE+ AL A G +
Sbjct: 10 MTLALRLAERGLYTTQPNPRVGCVIVKNNQIVGQGAHLKAGEPHAEVFALREA---GANA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPC++ G TPPC +ALI + +K+V++A+ DPNPLV+G G+ +L + GI V+
Sbjct: 67 EGADAYVTLEPCNHHGRTPPCVDALINARVKRVVVAMQDPNPLVAGNGIKRLQAHGIEVE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ E+ +N+GF SRM +P+VR K+A+SLD +T+L N S WIT + +R D W
Sbjct: 127 VGLMEAESKSLNLGFISRMTSALPYVRCKVAASLDGRTALNNGKSLWITGEPARLDVQHW 186
Query: 180 RARSCAILTG 189
RA+SCAI+TG
Sbjct: 187 RAQSCAIVTG 196
>gi|319639397|ref|ZP_07994147.1| riboflavin biosynthesis protein RibD [Neisseria mucosa C102]
gi|317399292|gb|EFV79963.1| riboflavin biosynthesis protein RibD [Neisseria mucosa C102]
Length = 367
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AKL ++SPNPRVGCVI +I+ G+ G HAE+ AL A A
Sbjct: 10 MQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFHVKAGEPHAEVHALRQAQAA---A 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALI SG+ +V+ ++ DPNPLV+GKG++ L +AGI +
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAEALIHSGVARVVASMTDPNPLVAGKGLSMLEAAGIRTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++RG P++R+K A+SLD KT+L + S WIT + +R D I
Sbjct: 127 SGLLEAQARELNRGFLSRIERGRPFIRLKCAASLDGKTALSDGRSFWITGEAAREDVQIL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|452881560|ref|ZP_21958290.1| riboflavin-specific deaminase/reductase, partial [Pseudomonas
aeruginosa VRFPA01]
gi|452182250|gb|EME09268.1| riboflavin-specific deaminase/reductase, partial [Pseudomonas
aeruginosa VRFPA01]
Length = 237
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+V++ +++ G+ G HAE+ AL A G
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVRDGQVVGEGWHVRAGEPHAEVHALRQA---GEKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVH 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|152986432|ref|YP_001346431.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PA7]
gi|150961590|gb|ABR83615.1| riboflavin biosynthesis protein RibD [Pseudomonas aeruginosa PA7]
Length = 373
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+V++ +++ G+ G HAE+ AL A G
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVRDGQVVGEGWHVRAGEPHAEVHALRQA---GEKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVH 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|406040017|ref|ZP_11047372.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 366
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL +AK ++ + PNP VGCVIVK+ +II G T GG+HAE+ AL A G
Sbjct: 15 MAQALAEAKTALYRTRPNPAVGCVIVKDDQIIGRGATAPVGGSHAEVFALREA---GDRA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++FG TPPC EAL+++ + +V+IA DPNPLV+GKG L +AGI+ +
Sbjct: 72 EGATAYVTLEPCAHFGRTPPCAEALVRAKVTRVVIATLDPNPLVAGKGQKILNNAGITTQ 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++++A E+N GF M G+P+VR+K+ASSLD +T++ + S+WIT ++R D W
Sbjct: 132 VGVLEQDAIELNRGFLKVMAGGLPYVRLKVASSLDGRTAMASGESKWITGVDARLDVQYW 191
Query: 180 RARSCAILTG 189
RARS ++TG
Sbjct: 192 RARSAVVITG 201
>gi|359443746|ref|ZP_09233567.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20429]
gi|358034302|dbj|GAA69816.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20429]
Length = 374
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK +II G+ + G HAE++AL A G
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNQIIGEGFHQLAGQGHAEVNAL---AIAGSSA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L K+G+ KVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 QGATAYVTLEPCSHYGRTPPCAEGLKKAGVVKVIAAMVDTNPQVAGKGLKILSDAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N+GFF RM++G+P+V K+A+S+D KT+L N S+WITS +R D ++
Sbjct: 132 YGLLESQARALNVGFFKRMEQGLPYVTCKMAASIDGKTALKNGQSKWITSPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|347538920|ref|YP_004846344.1| riboflavin biosynthesis protein RibD [Pseudogulbenkiania sp. NH8B]
gi|345642097|dbj|BAK75930.1| riboflavin biosynthesis protein RibD [Pseudogulbenkiania sp. NH8B]
Length = 364
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + ++PNPRVGCV+V++ ++ G+ + G HAE+ AL A G
Sbjct: 11 MARALRLAEQGLYTTTPNPRVGCVVVRDGEVVGEGWHIAAGTPHAEVHALRMA---GELA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC + LI++G+ +V+ A+ DP V+G+G+ L +AGI V
Sbjct: 68 RGATAYVTLEPCSHYGRTPPCAKGLIEAGVGRVVAAMQDPYHEVAGRGLDMLRAAGIEVA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF SR +RG PWV +K A+SLD KT+L N +SQWIT ++R D H
Sbjct: 128 VGLLEAEARRLNKGFLSRAERGRPWVTLKAAASLDGKTALLNGASQWITGPDARRDVHRL 187
Query: 180 RARSCAILTGKN 191
RAR+CAILTG
Sbjct: 188 RARACAILTGSG 199
>gi|419756849|ref|ZP_14283194.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PADK2_CF510]
gi|384396604|gb|EIE43022.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PADK2_CF510]
Length = 373
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 133/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+ +
Sbjct: 186 RARSSVVLSAAD 197
>gi|149927761|ref|ZP_01916013.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Limnobacter sp. MED105]
gi|149823587|gb|EDM82817.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Limnobacter sp. MED105]
Length = 377
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 126/177 (71%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+++PNPRVGCV V++ I+ G+ G HAE+ A+ ++ A+G + ST Y+TLEPC+
Sbjct: 25 STTPNPRVGCVFVRDGVAIAEGFHAKAGEGHAEVQAIADSRARGVSLAGSTAYVTLEPCA 84
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC EAL+ +G+ +V+ A+ DPNPLVSGKG+A L +AGI G++ ++A IN
Sbjct: 85 HHGRTGPCAEALVATGVARVVAAVLDPNPLVSGKGMAILQAAGIETAHGVLIEQARWINR 144
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GFFSRM+R PWVR+K+ASS D ++L N +SQWIT + +R H RA++CA+L+G
Sbjct: 145 GFFSRMERQRPWVRLKVASSADGISALNNGASQWITGEAARLHGHHLRAQACAVLSG 201
>gi|220934731|ref|YP_002513630.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219996041|gb|ACL72643.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 369
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + + PNPRVGCV+V++ +++ G+ G HAEI AL A G
Sbjct: 10 MARALQLARRGLYTTDPNPRVGCVMVRDGQVLGEGFHVRAGEPHAEILALRQA---GEAA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPC++FG TPPC +ALI +G+ +V+ A+ DPNP V+G+G+A+L +AGI+
Sbjct: 67 RGATVYVTLEPCAHFGRTPPCADALIHAGVARVVAAMVDPNPRVAGQGLARLTAAGITTA 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF SRM++G P+VR+K+A SLD +T++ + S+WIT + +R D
Sbjct: 127 SGVLEAEARALNPGFISRMEQGRPYVRVKLAMSLDGRTAMASGESRWITGEAARRDVQRL 186
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 187 RARAGAILTG 196
>gi|359446256|ref|ZP_09235952.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20439]
gi|358039939|dbj|GAA72201.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20439]
Length = 375
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK ++I G+ + G HAE++AL A G +
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNKVIGEGFHQLAGQGHAEVNAL---AMAGENA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +G+KKVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 KGATAYVTLEPCSHYGRTPPCAEGLKAAGVKKVIAAMVDSNPQVAGKGLKILADAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N+GFF RM++G+P+V K+A+S+D KT+L N S+WIT +R D ++
Sbjct: 132 YGLLEAQARALNLGFFKRMEQGLPFVTCKMAASIDGKTALKNGQSKWITGPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|385851911|ref|YP_005898426.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M04-240196]
gi|325206734|gb|ADZ02187.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
M04-240196]
Length = 369
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 131/192 (68%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGFAMLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|350562967|ref|ZP_08931790.1| riboflavin biosynthesis protein RibD [Thioalkalimicrobium
aerophilum AL3]
gi|349779833|gb|EGZ34174.1| riboflavin biosynthesis protein RibD [Thioalkalimicrobium
aerophilum AL3]
Length = 386
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+L +++ PNP VGCVI+ +++ G+ + G HAE+ AL AA D
Sbjct: 15 MNRALDLAQLGRVSTRPNPAVGCVIINRGQVVGEGWHQQAGQPHAEVLALRQAAEHAKD- 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI +G+K+V+IA+ DPNPLVSG+G+A L AGI V
Sbjct: 74 --ATAYVTLEPCSHFGKTPPCCNALIAAGVKRVVIAMTDPNPLVSGRGIAALGEAGIEVT 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
Q + A +N GF RMQ G P V +K+A+SLD K +L N SQWIT++ +R+ H+
Sbjct: 132 QNVAMARAKALNAGFVMRMQTGRPLVSLKLATSLDAKVALANGESQWITNELARHQGHLL 191
Query: 180 RARSCAILTG 189
RA+ CAI+TG
Sbjct: 192 RAQHCAIVTG 201
>gi|254236945|ref|ZP_04930268.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
C3719]
gi|126168876|gb|EAZ54387.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
C3719]
Length = 373
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 132/189 (69%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRL 185
Query: 180 RARSCAILT 188
RARS +L+
Sbjct: 186 RARSSVVLS 194
>gi|392535112|ref|ZP_10282249.1| riboflavin biosynthesis protein [Pseudoalteromonas arctica A
37-1-2]
Length = 374
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK +II G+ + G HAE++AL A G
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNQIIGEGFHQLAGQGHAEVNAL---AIAGNSA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L K+G+ KVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 QGATAYVTLEPCSHYGRTPPCAEGLKKAGVVKVIAAMVDTNPQVAGKGLKILSDAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N+GFF RM++G+P+V K+A+S+D KT+L N S+WITS +R D ++
Sbjct: 132 YGLLESQARALNVGFFKRMEQGLPYVTCKMAASIDGKTALKNGQSKWITSPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|381150280|ref|ZP_09862149.1| riboflavin biosynthesis protein RibD [Methylomicrobium album BG8]
gi|380882252|gb|EIC28129.1| riboflavin biosynthesis protein RibD [Methylomicrobium album BG8]
Length = 362
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 133/190 (70%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCV+V++ +I G+ GG+HAEI AL +A +
Sbjct: 12 MASALRLARNGLYTTHPNPRVGCVLVRDDEVIGEGWHVRAGGDHAEIAALKSAD----NA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++GI++V+ A+ DPNPLV+G+G+A+L AGI
Sbjct: 68 SGATAYVTLEPCSHHGKTPPCADALIEAGIRRVVAAMPDPNPLVAGRGLAKLREAGIEAV 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++++A +N GF RM G P+VR K+A SLD +T+L + S+WITS+E+R D H
Sbjct: 128 CGVLEEDARRLNPGFIQRMTTGRPFVRSKLAMSLDGRTALESGESRWITSREARQDVHRL 187
Query: 180 RARSCAILTG 189
RA+S AILTG
Sbjct: 188 RAQSSAILTG 197
>gi|383937013|ref|ZP_09990428.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rheinheimera
nanhaiensis E407-8]
gi|383701923|dbj|GAB60519.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rheinheimera
nanhaiensis E407-8]
Length = 372
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 123/176 (69%), Gaps = 3/176 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNP VG V+V ++I GY + GG HAE+ AL A G D +T Y+TLEPCS
Sbjct: 23 TTSPNPNVGAVLVNNGQVIGKGYHQQAGGPHAEVFALREA---GSDAAQATCYVTLEPCS 79
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC EALI +G+ +V++A+ DPNP V+G+G+ L AGI V GL++ EA +N
Sbjct: 80 HHGRTPPCAEALIAAGVSRVVVAMQDPNPQVAGRGITMLREAGIQVDVGLLEAEARALNP 139
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF SRM+R P+V++K+A+SLD +T+L N S+W+TS+ +R D +RA+SCAIL+
Sbjct: 140 GFLSRMERKRPYVQLKLAASLDGRTALANGDSKWLTSEAARADVQHYRAQSCAILS 195
>gi|392556143|ref|ZP_10303280.1| riboflavin biosynthesis protein [Pseudoalteromonas undina NCIMB
2128]
Length = 375
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK ++I G+ + G HAE++AL A G +
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNKVIGEGFHQLAGQGHAEVNALTMA---GENA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +G+KKV+ A+ D NP V+GKG+ L AGI V
Sbjct: 72 KGATAYVTLEPCSHYGRTPPCAEGLKAAGVKKVVAAMVDSNPQVAGKGLKILADAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N+GFF RM++G+P+V K+A+S+D KT+L N S+WIT +R D ++
Sbjct: 132 YGLLEEQARALNLGFFKRMEQGLPFVTCKMAASIDGKTALKNGQSKWITGPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|416230569|ref|ZP_11628493.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
46P47B1]
gi|326560692|gb|EGE11060.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
46P47B1]
Length = 350
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ AK I + PNP VGCV+VK+ +I GY G HAEI AL +A AQG+D
Sbjct: 14 MQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYHPKAGQPHAEIFALADAKAQGFDT 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI + +K+V+IA DPNP V+G G+ +L +AGI V
Sbjct: 74 KGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGNGIKKLQNAGIEVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A +N+GF M+ G+P+VR+K ASSLD +T++ + S+WIT E+R D
Sbjct: 134 VGVCDQQAAALNLGFLKAMRMGLPYVRLKTASSLDGRTAMASGESKWITGTEAREDVQRL 193
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 194 RAQSAAIVTG 203
>gi|307546181|ref|YP_003898660.1| riboflavin biosynthesis protein RibD [Halomonas elongata DSM 2581]
gi|307218205|emb|CBV43475.1| riboflavin biosynthesis protein RibD [Halomonas elongata DSM 2581]
Length = 384
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + ++PNPRVGCV+VKE R+I G+ + G HAEI AL NA G
Sbjct: 11 MARALRLARHGLYTTAPNPRVGCVLVKEGRVIGEGWHERAGEPHAEIHALRNA---GEAA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC AL+++G+ +V++A+ DPNP V+G+G+ +L AGI V+
Sbjct: 68 RGATAYVTLEPCSHQGRTGPCAVALVEAGVARVVVAMRDPNPQVAGRGIERLRQAGIEVE 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G+++ EA+ +N GF +RM RG P+VRMK+A SLD +T++ + SQWIT +R +
Sbjct: 128 EGVLEAEAHALNSGFIARMARGRPFVRMKMAMSLDGRTAMRSGESQWITGPCARREVQRL 187
Query: 180 RARSCAILTG 189
RARS ++TG
Sbjct: 188 RARSSVVMTG 197
>gi|339779701|gb|AEK06390.1| putative riboflavin biosynthesis protein [uncultured bacterium
DY94]
Length = 378
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK+ I+ G+ + G HAE++ALL A +Q
Sbjct: 14 MARAIELAKQGRFTTTPNPNVGCVLVKDNIIVGEGFHQVAGQGHAEVNALLMAGSQAK-- 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC E L +G+ KVI A+ DPNP V+GKG+A L AGI V
Sbjct: 72 -GATAYVTLEPCSHFGRTPPCAEGLKAAGVVKVIAAMVDPNPQVAGKGLAILADAGIVVA 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N GF RM++G+P+V K+A+SLD KT+L N S+WIT +R D +
Sbjct: 131 SGLLEPQARLLNRGFLKRMEQGMPFVTCKMAASLDGKTALKNGQSKWITGTAARQDVQLQ 190
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 191 RAQSCAILTGAD 202
>gi|377555586|ref|ZP_09785314.1| bifunctional riboflavin biosynthesis protein RibD [endosymbiont of
Bathymodiolus sp.]
Length = 348
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 136/192 (70%), Gaps = 8/192 (4%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDAL--LNAAAQGY 57
M+LALQ A K + NP VGCVIVK+ +II+ GY ++ G HAEI+AL +N A+G
Sbjct: 12 MSLALQLARKGRYGVASNPMVGCVIVKDNKIIAKGYHQTFGKAHAEINALTQINHQAKG- 70
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T+Y+TLEPC++ G TPPCT+A+I + +K+V+IA DPNPLV GKGVA L AGI
Sbjct: 71 ----ATLYVTLEPCAHQGKTPPCTQAIIDASVKEVVIATLDPNPLVRGKGVAILAGAGIV 126
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
VK GL++ E+ ++N GF RM+ G+P+V KIA S+D KTS+ + S+WIT +E+R D
Sbjct: 127 VKTGLLKNESRQLNRGFIKRMETGLPFVTCKIAMSIDGKTSMASGQSKWITGQEARQDVQ 186
Query: 178 IWRARSCAILTG 189
RA++ AILTG
Sbjct: 187 KLRAKNQAILTG 198
>gi|334144130|ref|YP_004537286.1| riboflavin biosynthesis protein RibD [Thioalkalimicrobium cyclicum
ALM1]
gi|333965041|gb|AEG31807.1| riboflavin biosynthesis protein RibD [Thioalkalimicrobium cyclicum
ALM1]
Length = 386
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A L +++ PNP VGCV++KE ++I G+ + G HAE+ AL A G
Sbjct: 15 MNRALDLASLGRLSTRPNPAVGCVLIKEGQLIGEGWHQRAGEPHAEVLALRMA---GDRA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI +GIK+V+IA+ DPNP VSG+G+A L +GI V
Sbjct: 72 RGATAYVTLEPCSHFGKTPPCCNALITAGIKRVVIAMIDPNPRVSGRGIAALQESGIEVT 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QG+ K A ++N GF SRMQRG P V +K+A+S+D K +L N SQWIT+ +R H+
Sbjct: 132 QGVAMKRAQQLNKGFVSRMQRGRPNVSLKLATSVDAKVALANGQSQWITNALARAQGHLL 191
Query: 180 RARSCAILTG 189
RA+ CAI+TG
Sbjct: 192 RAQQCAIITG 201
>gi|385339438|ref|YP_005893310.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis G2136]
gi|325197682|gb|ADY93138.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis G2136]
Length = 369
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALHQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L SAGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLESAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF S ++R P+VR+K A SLD KT+L + SS WIT +++R D +
Sbjct: 127 CGLLENKARELNRGFLSSIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|49088842|gb|AAT51612.1| PA4056, partial [synthetic construct]
Length = 374
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 133/192 (69%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+VK+ +++ G+ G HAE+ AL A G +
Sbjct: 9 MARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQA---GENA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L+ AGI+V+
Sbjct: 66 RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 126 SGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRL 185
Query: 180 RARSCAILTGKN 191
ARS +L+G +
Sbjct: 186 SARSSVVLSGAD 197
>gi|421551452|ref|ZP_15997443.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 69166]
gi|433472076|ref|ZP_20429454.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 68094]
gi|433478364|ref|ZP_20435674.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 70012]
gi|433526890|ref|ZP_20483512.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 69096]
gi|433539548|ref|ZP_20496015.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 70030]
gi|402327329|gb|EJU62719.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 69166]
gi|432206702|gb|ELK62703.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 68094]
gi|432213360|gb|ELK69279.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 70012]
gi|432258943|gb|ELL14223.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 69096]
gi|432271568|gb|ELL26691.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 70030]
Length = 369
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MQNALKLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALHQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNPLV+GKG+A L SAGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLESAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF S ++R P+VR+K A SLD KT+L + SS WIT +++R D +
Sbjct: 127 CGLLENKARELNRGFLSSIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|315125800|ref|YP_004067803.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913]
gi|315014314|gb|ADT67652.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913]
Length = 375
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK +II G+ + G HAE++AL A G +
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNKIIGEGFHRLAGQGHAEVNALTMA---GENA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +G+KKVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 KGATAYVTLEPCSHYGRTPPCAEGLKAAGVKKVIAAMVDSNPQVAGKGLKILADAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N GFF RM++G+P+V K+A+S+D KT+L N S+WIT +R D ++
Sbjct: 132 YGLLEAQARALNFGFFKRMEQGLPFVTCKMAASIDGKTALKNGQSKWITGPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|146281221|ref|YP_001171374.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri A1501]
gi|145569426|gb|ABP78532.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri A1501]
Length = 359
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + S+ PNPRVGCVIV + ++ G+ G HAE+ AL A G
Sbjct: 1 MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQA---GERA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+K+G+ +V+ A+ DPNP V+G G+ +L SAGI V
Sbjct: 58 RGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLERLRSAGIEVA 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 118 SGVLEGEARELNAGFIKRMESGLPYVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 177
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 178 RARSSVVLTGAD 189
>gi|194097710|ref|YP_002000751.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
NCCP11945]
gi|240013403|ref|ZP_04720316.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI18]
gi|193933000|gb|ACF28824.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
NCCP11945]
Length = 361
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI ++I+ G+ G HAE+ AL A G
Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGEPHAEVHALRQA---GEMA 58
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 59 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 118
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 119 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 178
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 179 RAESCAVLTG 188
>gi|381161088|ref|ZP_09870319.1| riboflavin biosynthesis protein RibD [Thiorhodovibrio sp. 970]
gi|380877324|gb|EIC19417.1| riboflavin biosynthesis protein RibD [Thiorhodovibrio sp. 970]
Length = 401
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCV+V+ II+ + + G HAE AL A G
Sbjct: 15 MARALRLAERGLYSTDPNPRVGCVLVRAGEIIADAWHQRTGEPHAEPLALRQA---GEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC + G TPPCTEALI +G+ +V+ A+ DPNP V+G+G+ QL +AGI+V+
Sbjct: 72 RGATAYVTLEPCCHQGRTPPCTEALINAGVARVVAAMQDPNPRVAGQGLEQLRAAGIAVE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLMQ EA +N GF RM+ G+PWVR K+A SLD +T++ + S+WITS +R D
Sbjct: 132 AGLMQTEAEALNPGFIRRMRTGLPWVRCKLAMSLDGRTAMASGESRWITSDAARADVQRL 191
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 192 RARSSAILTG 201
>gi|268596126|ref|ZP_06130293.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae FA19]
gi|268549914|gb|EEZ44933.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae FA19]
Length = 369
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI ++I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|385337446|ref|YP_005891319.1| bifunctional riboflavin biosynthesis
diaminohydroxyphosphoribosylaminopyrimidine deaminase
/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Neisseria meningitidis WUE 2594]
gi|433476234|ref|ZP_20433569.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 88050]
gi|433514122|ref|ZP_20470906.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 63049]
gi|433516346|ref|ZP_20473109.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2004090]
gi|433518246|ref|ZP_20474986.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 96023]
gi|433523441|ref|ZP_20480109.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 97020]
gi|433527582|ref|ZP_20484194.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM3652]
gi|433529775|ref|ZP_20486370.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM3642]
gi|433531970|ref|ZP_20488537.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2007056]
gi|433535264|ref|ZP_20491796.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2001212]
gi|319409860|emb|CBY90173.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase) [Neisseria meningitidis WUE 2594]
gi|432208089|gb|ELK64068.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 88050]
gi|432246009|gb|ELL01471.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 63049]
gi|432251467|gb|ELL06834.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2004090]
gi|432251984|gb|ELL07344.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 96023]
gi|432261498|gb|ELL16746.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis 97020]
gi|432266482|gb|ELL21665.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM3652]
gi|432268615|gb|ELL23782.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2007056]
gi|432268867|gb|ELL24032.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
NM3642]
gi|432269896|gb|ELL25044.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
2001212]
Length = 369
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 131/192 (68%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +++ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGEPHAEVHALHQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGFAMLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|385334965|ref|YP_005888912.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Neisseria gonorrhoeae TCDC-NG08107]
gi|317163508|gb|ADV07049.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Neisseria gonorrhoeae TCDC-NG08107]
Length = 361
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI ++I+ G+ G HAE+ AL A G
Sbjct: 2 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGEPHAEVHALHQA---GEMA 58
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 59 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 118
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 119 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 178
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 179 RAESCAVLTG 188
>gi|304388339|ref|ZP_07370452.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis ATCC
13091]
gi|304337656|gb|EFM03812.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis ATCC
13091]
Length = 369
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 131/192 (68%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A L ++SPNPRVGCVI +++ G+ G HAE+ AL A AQG
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGEPHAEVHALHQAGEMAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG A L +AGI
Sbjct: 69 ----ATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGFAMLEAAGIK 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
+ GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +++R D
Sbjct: 125 TECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEDARADVQ 184
Query: 178 IWRARSCAILTG 189
+ RA SCA+LTG
Sbjct: 185 VLRAESCAVLTG 196
>gi|268594076|ref|ZP_06128243.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 35/02]
gi|268547465|gb|EEZ42883.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 35/02]
Length = 369
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI ++I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGEPHAEVHALHQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|268683551|ref|ZP_06150413.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
SK-92-679]
gi|268623835|gb|EEZ56235.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
SK-92-679]
Length = 369
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI ++I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|389784290|ref|ZP_10195444.1| riboflavin biosynthesis protein RibD [Rhodanobacter spathiphylli
B39]
gi|388433204|gb|EIL90171.1| riboflavin biosynthesis protein RibD [Rhodanobacter spathiphylli
B39]
Length = 353
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVI ++ G+ + G HAE+ AL A G
Sbjct: 1 MAHALRLAERGLFTTQPNPRVGCVIAHGDDVVGTGFHQRAGEPHAEVFALREA---GGSA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC EAL+ +G+++V+IA DP P V+G+G+ +L +AGI V+
Sbjct: 58 RGATAYVTLEPCAHHGRTPPCAEALVAAGVRRVVIASEDPFPQVNGRGIDRLRAAGIMVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
L ++ A E+N GFFSR++RG P+VR+K+A SLD +T+L N S+WIT + +R D W
Sbjct: 118 TSLQRETARELNAGFFSRIERGRPFVRVKLAMSLDGRTALANGESKWITGEAARADVQRW 177
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 178 RARSSAILTG 187
>gi|240015845|ref|ZP_04722385.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Neisseria gonorrhoeae FA6140]
gi|240120474|ref|ZP_04733436.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Neisseria gonorrhoeae PID24-1]
gi|254492997|ref|ZP_05106168.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 1291]
gi|268598251|ref|ZP_06132418.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae MS11]
gi|268602915|ref|ZP_06137082.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID1]
gi|268681384|ref|ZP_06148246.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID332]
gi|226512037|gb|EEH61382.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 1291]
gi|268582382|gb|EEZ47058.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae MS11]
gi|268587046|gb|EEZ51722.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID1]
gi|268621668|gb|EEZ54068.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID332]
Length = 369
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI ++I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|416256761|ref|ZP_11639838.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis O35E]
gi|326573500|gb|EGE23466.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis O35E]
Length = 350
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ AK I + PNP VGCV+VK+ +I GY G HAEI AL +A AQG+D
Sbjct: 14 MQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYHPKAGQPHAEIFALADAKAQGFDT 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI + +K+V+IA DPNP V+G G+ +L +AGI V
Sbjct: 74 KGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGNGIKKLQNAGIEVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A +N+GF M+ G+P+VR+K ASSLD +T++ + S+WIT E+R D
Sbjct: 134 VGVCDQQAAALNLGFLKAMRMGLPYVRLKTASSLDGRTAMASGESKWITGIEAREDVQRL 193
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 194 RAQSAAIITG 203
>gi|268685855|ref|ZP_06152717.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
SK-93-1035]
gi|268626139|gb|EEZ58539.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
SK-93-1035]
Length = 369
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI ++I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|89093485|ref|ZP_01166433.1| riboflavin biosynthesis protein RibD [Neptuniibacter caesariensis]
gi|89082175|gb|EAR61399.1| riboflavin biosynthesis protein RibD [Oceanospirillum sp. MED92]
Length = 379
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 125/178 (70%), Gaps = 5/178 (2%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN-STVYITLEPC 71
++PNPRVGCV+VK++ I+ G+ G HAE+ NA AQ D+ +T Y+TLEPC
Sbjct: 26 TTNPNPRVGCVLVKDEVIVGEGFHFRAGEGHAEV----NAMAQAGDLAKGATAYVTLEPC 81
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ +V+ A+ DPNP V+G+G+ L SAGIS + GL++ EA +N
Sbjct: 82 SHYGRTPPCAEGLIKAGVNRVVCAMVDPNPQVAGRGIQMLESAGISAESGLLEAEARALN 141
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM+ G+P+V +KIA+SLD +T++ + S+WIT +R+D RARS AILTG
Sbjct: 142 PGFIKRMETGLPFVSLKIATSLDGRTAMASGESKWITGAAARSDVQKLRARSSAILTG 199
>gi|414071242|ref|ZP_11407214.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. Bsw20308]
gi|410806316|gb|EKS12310.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. Bsw20308]
Length = 377
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK +II G+ + G HAE++AL A G +
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNQIIGEGFHQLAGQGHAEVNAL---AVAGKNA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +G+ KVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 QGATAYVTLEPCSHYGRTPPCAEGLKAAGVVKVIAAMVDTNPQVAGKGLKILSDAGIDVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N+GFF RM++G+P+V K+A+S+D KT+L N S+WITS +R D ++
Sbjct: 132 YGLLESQARALNVGFFKRMEQGLPYVICKMAASIDGKTALKNGQSKWITSPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAKSCAILTGAD 203
>gi|387890191|ref|YP_006320489.1| riboflavin biosynthesis protein RibD [Escherichia blattae DSM 4481]
gi|414595545|ref|ZP_11445164.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia blattae NBRC 105725]
gi|386925024|gb|AFJ47978.1| riboflavin biosynthesis protein RibD [Escherichia blattae DSM 4481]
gi|403193508|dbj|GAB82816.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia blattae NBRC 105725]
Length = 367
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A + ++PNP VGCVIV++ I+ G+ G HAE+ AL A G
Sbjct: 7 MARALQLAGRGCFTTAPNPNVGCVIVRDGEIVGEGFHYRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP V+G+G+ +L AG+ V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIEAGVSRVVAAMQDPNPQVAGRGLHRLKQAGVEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ EA +N GFF RM+ G PWV++K+ +SLD +T++ + SQWITS +SR D
Sbjct: 124 HGLMRHEAEALNRGFFKRMRTGFPWVQVKLGASLDGRTAMASGESQWITSPQSRRDVQRL 183
Query: 180 RARSCAILT 188
RARS AILT
Sbjct: 184 RARSAAILT 192
>gi|332534978|ref|ZP_08410796.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035596|gb|EGI72088.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 377
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK +II G+ + G HAE++AL A G +
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNQIIGEGFHQLAGQGHAEVNAL---AVAGKNA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +G+ KVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 QGATAYVTLEPCSHYGRTPPCAEGLKAAGVVKVIAAMVDTNPQVAGKGLKILSDAGIDVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N+GFF RM++G+P+V K+A+S+D KT+L N S+WITS +R D ++
Sbjct: 132 YGLLESQARALNVGFFKRMEQGLPYVICKMAASIDGKTALKNGQSKWITSPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAKSCAILTGAD 203
>gi|359436818|ref|ZP_09226900.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20311]
gi|358028514|dbj|GAA63149.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20311]
Length = 375
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK ++I G+ + G HAE++AL A G +
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNKVIGEGFHQLAGQGHAEVNAL---AMAGENA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +GIKKVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 KGATAYVTLEPCSHYGRTPPCAEGLKAAGIKKVIAAMVDSNPQVAGKGLKILADAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N+GFF RM++G+P+V K+A+S+D KT+L N S+WIT +R D ++
Sbjct: 132 YGLLEAQARALNLGFFKRMEQGLPFVTCKMAASIDGKTALKNGQSKWITGPAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA++CAILTG +
Sbjct: 192 RAQNCAILTGAD 203
>gi|416241661|ref|ZP_11632889.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC7]
gi|416245934|ref|ZP_11634827.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC8]
gi|416250515|ref|ZP_11637301.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis CO72]
gi|326571732|gb|EGE21745.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC8]
gi|326571813|gb|EGE21819.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC7]
gi|326574353|gb|EGE24296.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis CO72]
Length = 350
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ AK I + PNP VGCV+VK+ +I GY G HAEI AL +A AQG+D
Sbjct: 14 MQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYHPKAGQPHAEIFALADAKAQGFDT 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI + +K+V+IA DPNP V+G G+ +L +AGI V
Sbjct: 74 KGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGNGIKKLQNAGIEVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A +N+GF M+ G+P+VR+K ASSLD +T++ + S+WIT E+R D
Sbjct: 134 VGVCDQQAAALNLGFLKAMRMGLPYVRLKTASSLDGRTAMASGESKWITGIEAREDVQRL 193
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 194 RAQSAAIITG 203
>gi|127512119|ref|YP_001093316.1| riboflavin biosynthesis protein RibD [Shewanella loihica PV-4]
gi|126637414|gb|ABO23057.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella loihica PV-4]
Length = 386
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 122/177 (68%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNP VGCVIV+ + ++ G+ + GG HAE+ AL A G +T Y+TLEPCS
Sbjct: 28 TTSPNPNVGCVIVQGETLVGEGFHIAAGGPHAEVHALRMA---GDKAKGATAYVTLEPCS 84
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC EALIK+ + +V++A+ DPNP VSG+G+ L AGI V+ GL Q+EA +N
Sbjct: 85 HYGRTPPCAEALIKAEVSRVVVAVTDPNPQVSGRGIKMLQDAGILVEVGLHQEEAAALNP 144
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM+ G+PWV +K+A+SLD KT+L N S+WIT E+R D RAR A++TG
Sbjct: 145 GFMKRMRSGLPWVGIKLATSLDGKTALSNGVSKWITGPEARRDVQRMRARFDAVVTG 201
>gi|333982353|ref|YP_004511563.1| riboflavin biosynthesis protein RibD [Methylomonas methanica MC09]
gi|333806394|gb|AEF99063.1| riboflavin biosynthesis protein RibD [Methylomonas methanica MC09]
Length = 362
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 123/177 (69%), Gaps = 1/177 (0%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNPRVGCV+VK II+ G+ G HAEIDAL A Q +T Y+TLEPCS
Sbjct: 22 TTDPNPRVGCVLVKGGEIIAEGWHAQAGQAHAEIDALAKLADQSL-AQGATAYVTLEPCS 80
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G T PC +ALI++GI +V++A+ DPNPLV+G G+ ++ +AGI V GL+Q +A ++N
Sbjct: 81 HHGRTGPCCDALIQAGIGRVVVAMQDPNPLVAGNGLKKMRAAGIEVSCGLLQTDAEQLNR 140
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM G+P+VR K+A SLD +T+L N SQWITS ++R D ++RA S AI+TG
Sbjct: 141 GFIKRMVSGLPYVRSKLAMSLDGRTALANGESQWITSSQARQDVQMFRAESSAIVTG 197
>gi|392553134|ref|ZP_10300271.1| riboflavin biosynthesis protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 373
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK+ +II G+ GG HAE+ AL A G +
Sbjct: 14 MARAIELAKRGRFTTTPNPNVGCVLVKDNQIIGEGFHIQAGGPHAEVHALKMA---GDNA 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+G+ +V+ A+ DPNP V+G+G+ L AGI
Sbjct: 71 KGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVAAMVDPNPEVAGRGLKMLEDAGIETD 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA +N+GF RM+ +P+VR K+A+SLD KT+L N S+WITS ESR
Sbjct: 131 FGLLNDEAEALNLGFLKRMRTNLPFVRCKLAASLDGKTALENGESKWITSSESRRAVQDL 190
Query: 180 RARSCAILTGKN 191
RA SCA+L+G +
Sbjct: 191 RAESCAVLSGAD 202
>gi|374703969|ref|ZP_09710839.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. S9]
Length = 378
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ RI+ G+ G HAE+ AL A A+
Sbjct: 8 MARALELARKGLYSTHPNPRVGCVIVQDGRIVGEGWHARSGEPHAEVHALRQAGAR---A 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP VSG G+ +L+ AGI+V+
Sbjct: 65 KGATAYVTLEPCSHHGRTPPCADALIDAGVARVVAAMQDPNPQVSGSGLLRLMQAGIAVQ 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ +A E+N GF RM++G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 125 SGVLEAQARELNAGFIKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 184
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 185 RARSSVVLSGAD 196
>gi|416236284|ref|ZP_11630611.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
12P80B1]
gi|326563101|gb|EGE13374.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
12P80B1]
Length = 350
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ +AK I + PNP VGCV+VK+ +I GY G HAEI AL +A AQG+D
Sbjct: 14 MQLAIAEAKKGIYTTRPNPAVGCVLVKDSLVIGQGYHPKAGQPHAEIFALADAKAQGFDT 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI + +++V++A DPNP V+G G+ +L +AGI V
Sbjct: 74 KGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGNGIKKLQNAGIEVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A +N+GF M+ G+P+VR+K ASSLD +T++ + S+WIT E+R D
Sbjct: 134 VGVCDQQAAALNLGFLKAMRMGLPYVRLKTASSLDGRTAMASGESKWITGIEAREDVQRL 193
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 194 RAQSAAIITG 203
>gi|349575170|ref|ZP_08887091.1| riboflavin biosynthesis protein RibD [Neisseria shayeganii 871]
gi|348013178|gb|EGY52101.1| riboflavin biosynthesis protein RibD [Neisseria shayeganii 871]
Length = 370
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 126/188 (67%), Gaps = 6/188 (3%)
Query: 3 LAL-QQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN 61
LAL +Q + S +SPNPRVGCVI +II G+ G HAE+ AL A G
Sbjct: 18 LALAEQGRFS--TSPNPRVGCVIALGGQIIGQGFHLRAGEPHAEVHALRQA---GSAARG 72
Query: 62 STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQG 121
+T Y+TLEPC++ G TPPC ALI++G+ +V+ A+ DPNPLV+GKG+A L AGI V G
Sbjct: 73 ATAYVTLEPCAHHGRTPPCAAALIQAGVARVVAAMRDPNPLVAGKGLAMLREAGIQVACG 132
Query: 122 LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRA 181
L + EA E+N GF SR++RG P+V++K A+SLD KT+L + SQWIT +R + RA
Sbjct: 133 LYEAEARELNRGFLSRIERGRPFVKLKTAASLDGKTALADGRSQWITGPAARQNVQTLRA 192
Query: 182 RSCAILTG 189
SCA+LTG
Sbjct: 193 ESCAVLTG 200
>gi|386019403|ref|YP_005937427.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
4166]
gi|327479375|gb|AEA82685.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
4166]
Length = 366
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + S+ PNPRVGCVIV + ++ G+ G HAE+ AL A G
Sbjct: 8 MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQA---GERA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+K+G+ +V+ A+ DPNP V+G G+ +L SAGI V
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLERLRSAGIEVA 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 125 SGVLEGEARELNAGFTKRMESGLPYVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 184
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 185 RARSSVVLTGAD 196
>gi|431928637|ref|YP_007241671.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
stutzeri RCH2]
gi|431826924|gb|AGA88041.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
stutzeri RCH2]
Length = 366
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + S+ PNPRVGCVIV ++ G+ G HAE+ AL A G
Sbjct: 8 MARALQLARKGLYSTHPNPRVGCVIVAAGELVGEGWHVRAGEPHAEVHALRQA---GERA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ L SAGI V
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGRGLQLLRSAGIEVV 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA EIN GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 125 SGVLEAEAREINCGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 184
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 185 RARSSVVLTGAD 196
>gi|253996924|ref|YP_003048988.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8]
gi|253983603|gb|ACT48461.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8]
Length = 372
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 134/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAA--QGY 57
M LAL+ A + + PNPRVGCVIV++++I+ G G HAE+ AL A A +G
Sbjct: 12 MNLALRLAAQGLYTTQPNPRVGCVIVRDQQIVGQGAHHKAGEPHAEVFALRQAGALAEGA 71
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
DVY +TLEPCS+FG TPPC +A+I + K+V+IA+ DPNPLV+G+GV L + G+
Sbjct: 72 DVY-----VTLEPCSHFGRTPPCVQAVIAAKPKRVVIAMQDPNPLVAGRGVTALRAQGVE 126
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V G++++EA +N+GF +RM RG P+VR KIA+SLD +T+L N SQWIT + +R D
Sbjct: 127 VVVGVLEQEAVALNVGFIARMTRGFPYVRSKIAASLDGRTALSNGKSQWITGEAARQDVQ 186
Query: 178 IWRARSCAILTG 189
WRA+SCAILTG
Sbjct: 187 HWRAQSCAILTG 198
>gi|389807909|ref|ZP_10204393.1| riboflavin biosynthesis protein RibD [Rhodanobacter thiooxydans
LCS2]
gi|388443390|gb|EIL99541.1| riboflavin biosynthesis protein RibD [Rhodanobacter thiooxydans
LCS2]
Length = 353
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVI ++ G+ + G HAE+ AL A G
Sbjct: 1 MAHALRLAEHGLYTTQPNPRVGCVIAHGDEVVGTGFHRRAGEPHAEVFALREA---GERA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC + L+ +G+ +V+IA DP P V+G G+ +L +AGI+V+
Sbjct: 58 RGATAYVTLEPCAHHGRTPPCADVLVAAGVGRVVIAAEDPFPQVNGHGIGKLRAAGIAVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GLM++ A E+N GFFSR++RG P+VR+K+A SLD +T+L + S+WIT +R D W
Sbjct: 118 RGLMREAARELNCGFFSRIERGRPFVRVKLAMSLDGRTALASGESKWITGAAARADVQRW 177
Query: 180 RARSCAILTG 189
RARS AIL+G
Sbjct: 178 RARSSAILSG 187
>gi|59800550|ref|YP_207262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Neisseria
gonorrhoeae FA 1090]
gi|293397713|ref|ZP_06641919.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae F62]
gi|59717445|gb|AAW88850.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Neisseria gonorrhoeae FA 1090]
gi|291611659|gb|EFF40728.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae F62]
Length = 369
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|339492799|ref|YP_004713092.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|338800171|gb|AEJ04003.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 366
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + S+ PNPRVGCVIV + ++ G+ G HAE+ AL A G
Sbjct: 8 MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQA---GERA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+K+G+ +V+ A+ DPNP V+G G+ +L SAGI V
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLERLRSAGIEVA 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 125 SGVLEGEARELNAGFTKRMESGLPYVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 184
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 185 RARSSVVLTGAD 196
>gi|452750413|ref|ZP_21950162.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri NF13]
gi|452005670|gb|EMD97953.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri NF13]
Length = 367
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + S+ PNPRVGCVIV + ++ G+ G HAE+ AL A G
Sbjct: 8 MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQA---GERA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALIK+G+ +V+ A+ DPNP V+G+G+ L SAGI +
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCAEALIKAGVGRVVAAMQDPNPQVTGRGLELLRSAGIEIA 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 125 SGVLEAEARELNNGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 184
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 185 RARSSVVLTGAD 196
>gi|410087040|ref|ZP_11283745.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Morganella
morganii SC01]
gi|409766269|gb|EKN50363.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Morganella
morganii SC01]
Length = 370
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++PNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MARALELAALGRFTTAPNPNVGCVIVRDGEIVGEGYHQRAGEPHAEVHALRMA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCAEALINAGVSRVVAAMQDPNPQVAGRGLFKLREAGIEVS 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA +N GFF RM+ G P++++K+A+S+D KT+L N SQWITSK +R D +
Sbjct: 126 HGVLMQEAEALNKGFFKRMRTGFPYIQLKMAASIDGKTALANGESQWITSKAARQDVQQF 185
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 186 RAQAGAILS 194
>gi|268600600|ref|ZP_06134767.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID18]
gi|291044592|ref|ZP_06570301.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI2]
gi|268584731|gb|EEZ49407.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID18]
gi|291011486|gb|EFE03482.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI2]
Length = 369
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A L ++SPNPRVGCVI +I+ G+ G HAE+ AL A G
Sbjct: 10 MENALDLADLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA---GEMA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T ++TLEPCS++G TPPC EAL++SG+ +V+ A+ DPNP V+GKG+ L +AGI +
Sbjct: 67 KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKAAGIKTE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF SR++R P+VR+K A SLD KT+L + SS WIT +E+R D +
Sbjct: 127 CGLLENKARELNRGFLSRIERRRPFVRLKCAVSLDGKTALSDGSSFWITGEEARADVQVL 186
Query: 180 RARSCAILTG 189
RA SCA+LTG
Sbjct: 187 RAESCAVLTG 196
>gi|410626490|ref|ZP_11337251.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
mesophila KMM 241]
gi|410154029|dbj|GAC24020.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
mesophila KMM 241]
Length = 372
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M LA++ A K +SPNP VGCVI+ + I+ G+ + G HAEI A+ A G
Sbjct: 12 MALAIRLAEKGQYTTSPNPNVGCVIIDAQGNIVGQGWHQKAGTPHAEIHAIAQA---GER 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPC++ G T PC+EAL+K+G+K+V+ A+ DPNPLV+G G+ +L AG++V
Sbjct: 69 TKGATAYVTLEPCNHHGRTGPCSEALLKAGVKRVVAAMVDPNPLVAGSGLQKLCDAGVAV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
GL+++EA +N+GF RM+ G+PWV +K+ASSLD KT+L N SQWIT +R D
Sbjct: 129 SSGLLEREAMALNLGFIKRMKTGMPWVTVKLASSLDGKTALNNGESQWITGPLAREDVQR 188
Query: 179 WRARSCAILTG 189
RA+SCAIL+G
Sbjct: 189 HRAQSCAILSG 199
>gi|385787545|ref|YP_005818654.1| Riboflavin biosynthesis protein RibD [Erwinia sp. Ejp617]
gi|310766817|gb|ADP11767.1| Riboflavin biosynthesis protein RibD [Erwinia sp. Ejp617]
Length = 367
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCV+V++ +I+ GY G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMRAGEPHAEVHALRMA---GEKS 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +GIK+V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 LGATAYVTLEPCSHHGRTPPCCEALIAAGIKRVVTAMQDPNPQVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA +N GF RM+ G PWV++K+ +SLD +T++ + SQWITS E+R D
Sbjct: 124 HGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|418292847|ref|ZP_12904777.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379064260|gb|EHY77003.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 366
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + S+ PNPRVGCVIV + ++ G+ G HAE+ AL A G
Sbjct: 8 MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQA---GERA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+K+G+ +V+ A+ DPNP V+G G+ L SAGI V
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLKLLRSAGIEVA 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 125 SGVLEGEARELNAGFIKRMESGLPYVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 184
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 185 RARSSVVLTGAD 196
>gi|308048548|ref|YP_003912114.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Ferrimonas balearica DSM 9799]
gi|307630738|gb|ADN75040.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
;5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ferrimonas balearica DSM 9799]
Length = 373
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCV+V++ ++ G+ GG HAE+ AL A G
Sbjct: 10 MARALELARRGQLTTRPNPRVGCVLVRDGEVVGEGFHIRAGGPHAEVHAL---RAAGDKA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC++ALI +G+ +V+ A+ DPNP V+G+G+A L +AGI +
Sbjct: 67 RGATAYVTLEPCSHYGRTPPCSQALIDAGVARVVAAMVDPNPQVAGRGLAMLEAAGIETQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G P+VR+K+A+SLD +T+L N S+WIT E+R D
Sbjct: 127 HGLMANEAEAVNPGFMKRMRTGRPFVRVKLAASLDGRTALANGQSKWITGPEARADVQRL 186
Query: 180 RARSCAILTGKN 191
RA S A++TG +
Sbjct: 187 RAISDAVITGAD 198
>gi|410641971|ref|ZP_11352489.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
chathamensis S18K6]
gi|410138288|dbj|GAC10676.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
chathamensis S18K6]
Length = 372
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 129/191 (67%), Gaps = 5/191 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M LA++ A K +SPNP VGCVI K I+ G+ + G HAEI A+ A G
Sbjct: 12 MALAIRLAEKGQYTTSPNPNVGCVITDPKGNIVGQGWHQKAGTPHAEIHAIAQA---GER 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPC++ G T PC+EALIK+G+ +V+ A+ DPNPLV+G G+ +L AG++V
Sbjct: 69 TKGATAYVTLEPCNHHGRTGPCSEALIKAGVSRVVAAMVDPNPLVAGSGLQKLSDAGVAV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
GL+++EA +N+GF RM+ GIPWV +K+ASSLD KT+L N SQWIT +R D
Sbjct: 129 SSGLLEREAKALNLGFIKRMKTGIPWVTVKLASSLDGKTALNNGESQWITGPLAREDVQR 188
Query: 179 WRARSCAILTG 189
RA+SCAIL+G
Sbjct: 189 HRAKSCAILSG 199
>gi|421492875|ref|ZP_15940234.1| hypothetical protein MU9_1404 [Morganella morganii subsp. morganii
KT]
gi|455740416|ref|YP_007506682.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Morganella
morganii subsp. morganii KT]
gi|400192980|gb|EJO26117.1| hypothetical protein MU9_1404 [Morganella morganii subsp. morganii
KT]
gi|455421979|gb|AGG32309.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Morganella
morganii subsp. morganii KT]
Length = 370
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++PNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MARALELAALGRFTTAPNPNVGCVIVRDGEIVGEGYHQRAGEPHAEVHALRMA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCAEALINAGVSRVVAAMQDPNPQVAGRGLFKLREAGIEVS 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA +N GFF RM+ G P++++K+A+S+D KT+L N SQWITSK +R D +
Sbjct: 126 HGVLMQEAEALNKGFFKRMRTGFPYIQLKMAASIDGKTALANGESQWITSKAARQDVQQF 185
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 186 RAQAGAILS 194
>gi|319786233|ref|YP_004145708.1| riboflavin biosynthesis protein RibD [Pseudoxanthomonas suwonensis
11-1]
gi|317464745|gb|ADV26477.1| riboflavin biosynthesis protein RibD [Pseudoxanthomonas suwonensis
11-1]
Length = 365
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A + + PNP VGCV+ K+ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALQLAARGLYTARPNPVVGCVVAKDGAVVGEGWHPRAGEPHAEVFALREA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC EAL+++G+ +V+ A+ DP P V G G A+L +AGI+V
Sbjct: 70 RGATAYVTLEPCAHHGRTPPCAEALVQAGVARVVAAMRDPFPRVDGAGFARLQAAGIAVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ +A ++N GF SR RG PW+R+K+A+SLD +T++ + S+WIT + +R D W
Sbjct: 130 AGLMEGQARDLNRGFLSRFTRGRPWLRVKLAASLDGRTAMASGESKWITGEAARADVQRW 189
Query: 180 RARSCAILTGKN 191
RARS AILTG +
Sbjct: 190 RARSGAILTGAD 201
>gi|188534657|ref|YP_001908454.1| riboflavin biosynthesis protein RibD [Erwinia tasmaniensis Et1/99]
gi|188029699|emb|CAO97578.1| Riboflavin biosynthesis protein RibD [Erwinia tasmaniensis Et1/99]
Length = 367
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCV+V++ +I+ GY G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHLRAGEPHAEVHALRMA---GEKS 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +ALI +G+K+V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 RGATVYVTLEPCSHHGRTPPCCDALIAAGVKRVVTAMQDPNPQVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA +N GF RM+ G PWV++K+ +SLD +T++ + SQWITS E+R D
Sbjct: 124 HGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|408822364|ref|ZP_11207254.1| riboflavin biosynthesis protein RibD [Pseudomonas geniculata N1]
Length = 381
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + + + PNP VGCVI +R++ G+ + GG HAE+ AL A G D
Sbjct: 33 MANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQCAGGPHAEVFALREA---GSDA 89
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V G G L +AGI V
Sbjct: 90 RGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDLLRNAGIEVA 149
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GLM +A E+N GF SR++R PW+R+K+A+SLD +T++ + SS+WIT +R D W
Sbjct: 150 EGLMAAQARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGPAAREDVQHW 209
Query: 180 RARSCAILTGKN 191
RAR+ AILTG +
Sbjct: 210 RARAGAILTGAD 221
>gi|292492824|ref|YP_003528263.1| riboflavin biosynthesis protein RibD [Nitrosococcus halophilus Nc4]
gi|291581419|gb|ADE15876.1| riboflavin biosynthesis protein RibD [Nitrosococcus halophilus Nc4]
Length = 373
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCV+V+ I+ G+ + G HAE++AL A + +T Y+TLEPC
Sbjct: 22 FTTDPNPRVGCVLVRAGEIVGEGWHQWAGDAHAEVNALRQADVRAR---GATCYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
+ G TPPCTEALI++G+ +V+ A+ DPNP V+G+G+AQL AG+ V+ GL+Q+EA +N
Sbjct: 79 CHRGRTPPCTEALIEAGVVRVVAAMRDPNPKVAGQGLAQLREAGLQVEYGLLQEEAQALN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF R+ +G PWVR K+A SLD T+L + S+WIT+ +R D WRARS AILTG
Sbjct: 139 PGFVQRLVQGRPWVRCKLAMSLDGATALASGESRWITAPPARRDVQRWRARSSAILTG 196
>gi|372487943|ref|YP_005027508.1| riboflavin biosynthesis protein RibD [Dechlorosoma suillum PS]
gi|359354496|gb|AEV25667.1| riboflavin biosynthesis protein RibD [Dechlorosoma suillum PS]
Length = 365
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 2 TLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYN 61
LAL + L ++SPNPRVGCV+V++ ++ G+ G HAE+ AL A
Sbjct: 17 ALALAEQGL-FSTSPNPRVGCVLVRDGVVVGEGWHVRAGEPHAEVHALRAAGEA---ARG 72
Query: 62 STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQG 121
+T Y+TLEPCS+ G TPPC EAL+ +G+ +V+ A+ DPNPLV+G+G+A L AGI V G
Sbjct: 73 ATAYVTLEPCSHHGRTPPCAEALVAAGVARVVAAMEDPNPLVAGRGLAILRQAGIEVCAG 132
Query: 122 LMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRA 181
++ EA E+NIGF SRM RG PWVR+K ASSLD +T+L N SQWIT E+R D H WRA
Sbjct: 133 VLANEARELNIGFVSRMTRGRPWVRLKAASSLDGRTALANGQSQWITGAEARQDGHRWRA 192
Query: 182 RSCAILTG 189
R+CAIL+G
Sbjct: 193 RACAILSG 200
>gi|422666281|ref|ZP_16726150.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330976721|gb|EGH76762.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 378
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALEMARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|259909281|ref|YP_002649637.1| Riboflavin biosynthesis protein RibD [Erwinia pyrifoliae Ep1/96]
gi|387872242|ref|YP_005803623.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia pyrifoliae DSM 12163]
gi|224964903|emb|CAX56426.1| Riboflavin biosynthesis protein RibD [Erwinia pyrifoliae Ep1/96]
gi|283479336|emb|CAY75252.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia pyrifoliae DSM 12163]
Length = 367
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCV+V++ +I+ GY G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMLAGEPHAEVHALRMA---GEKS 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +GIK+V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 LGATAYVTLEPCSHHGRTPPCCEALIAAGIKRVVTAMQDPNPQVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA +N GF RM+ G PWV++K+ +SLD +T++ + SQWITS E+R D
Sbjct: 124 HGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|410614855|ref|ZP_11325892.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
psychrophila 170]
gi|410165561|dbj|GAC39781.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
psychrophila 170]
Length = 378
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 129/191 (67%), Gaps = 5/191 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIV-KEKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M A+Q AK +SPNP VGCVI ++ I+ G+ K G HAE+ AL A G
Sbjct: 12 MARAIQLAKCGEYTTSPNPNVGCVISDRQGVILGEGWHKKAGAPHAEVHALQQA---GEF 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPCS++G TPPC +ALI++G+ +V+ A+ DPNP+VSGKG+ +L AGI
Sbjct: 69 SKGATAYVTLEPCSHYGKTPPCADALIEAGVTRVVAAMVDPNPVVSGKGLIKLQEAGIKT 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ GL+Q A ++N GF RM+ G+PWV +K+A+SLD KT+L N SQWIT ++R D
Sbjct: 129 EHGLLQASAEQLNRGFIKRMRTGLPWVTVKLAASLDGKTALKNGISQWITGPQARQDVQR 188
Query: 179 WRARSCAILTG 189
RARSCAIL+G
Sbjct: 189 HRARSCAILSG 199
>gi|238897276|ref|YP_002922953.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase (C-terminal), partial [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229465031|gb|ACQ66805.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase (C-terminal) [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 392
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 130/189 (68%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A L ++PNP VGCV+V+ +++ GY G HAEI AL A G
Sbjct: 18 MSYALRLASLGRFTTTPNPNVGCVLVRHGQVVGEGYHLRLGEPHAEIHALQKA---GRLA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
S YITLEPC ++G TPPC EALIK+G+++V++AI DPNP ++G+G+ QL AGI V
Sbjct: 75 KGSVAYITLEPCCHYGKTPPCVEALIKAGVRRVVVAIEDPNPEIAGRGLYQLKQAGIEVT 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ EA ++N GF RM+ G+P++++K+A SLD +T++ + SQWITS++SR D +
Sbjct: 135 SGILSTEAQDLNPGFLKRMRTGLPYIQLKMACSLDGRTAMASGESQWITSEQSRQDVQFF 194
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 195 RAQSSAILS 203
>gi|440719582|ref|ZP_20900008.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae
BRIP34876]
gi|440727121|ref|ZP_20907362.1| riboflavin biosynthesis protein RibD:riboflavin-specific deaminase,
C-terminal [Pseudomonas syringae BRIP34881]
gi|440364695|gb|ELQ01818.1| riboflavin biosynthesis protein RibD:riboflavin-specific deaminase,
C-terminal [Pseudomonas syringae BRIP34881]
gi|440367718|gb|ELQ04775.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae
BRIP34876]
Length = 378
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|392308003|ref|ZP_10270537.1| riboflavin biosynthesis protein [Pseudoalteromonas citrea NCIMB
1889]
Length = 370
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNP VGCV+VK+ ++ G+ + G HAE+ AL A G +T Y+TLEPCS
Sbjct: 24 TTTPNPNVGCVVVKDGYVVGEGFHQRAGEPHAEVHAL---KAAGSRASGATAYVTLEPCS 80
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC E LIK+G+ +V+ A+ DPNP V+G+G+A L AGI GL++ +A +N
Sbjct: 81 HYGRTPPCAEGLIKAGVARVVAAMVDPNPQVAGRGLAMLKEAGIETASGLLEAQARALND 140
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF RM+ G+P+V K+A+S+D KT+L N S+WITS ++R D +RA+SCAILTG +
Sbjct: 141 GFLKRMETGLPFVTCKLAASVDGKTALNNGESKWITSSQARQDVQGFRAQSCAILTGAD 199
>gi|15837552|ref|NP_298240.1| riboflavin-specific deaminase [Xylella fastidiosa 9a5c]
gi|9105878|gb|AAF83760.1|AE003934_2 riboflavin-specific deaminase [Xylella fastidiosa 9a5c]
Length = 364
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV++ ++ G+ + G HAE+ AL A G +T Y+TLEPC+
Sbjct: 25 TTRPNPMVGCVIVRDGEVVGEGWHQRAGDPHAEVFAL---CAAGDRARGATAYVTLEPCA 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC ALI +G+++V+ A+ DP PLV+G GV L +AG++V+ GLM+ +A +N
Sbjct: 82 HLGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGVTLLRAAGVTVEHGLMEAQARALNR 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PWVR+K+ SSLD +T+L + S+WIT + +R D WRAR+ AILTG
Sbjct: 142 GFLSRVERGRPWVRIKLGSSLDGRTALASGESKWITGEAARADVQRWRARASAILTGAG 200
>gi|94500359|ref|ZP_01306891.1| riboflavin-specific deaminase/reductase [Bermanella marisrubri]
gi|94427394|gb|EAT12372.1| riboflavin-specific deaminase/reductase [Oceanobacter sp. RED65]
Length = 370
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q AK + S+ PNPRVGCV+VKE II GY G HAE++AL A +
Sbjct: 8 MARAIQLAKQGLYSTDPNPRVGCVLVKEGNIIGEGYHVRAGEGHAEVNALAQAGSA---A 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC++ LIK+GI+ ++ A+ DPNP VSG+G ++ +AGI +
Sbjct: 65 QGATAYVTLEPCSHFGRTPPCSDTLIKAGIRTLVCAMQDPNPEVSGRGFEKMRAAGIEII 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM G+P+VR+KIASSLD +T++ + SQWIT +R D
Sbjct: 125 SGVLESEAKKLNPGFIKRMSGGLPYVRVKIASSLDGRTAMASGESQWITGGNARADVQRL 184
Query: 180 RARSCAILTG 189
RARS AI++G
Sbjct: 185 RARSSAIISG 194
>gi|292487445|ref|YP_003530317.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Erwinia amylovora CFBP1430]
gi|292898687|ref|YP_003538056.1| riboflavin biosynthesis protein RibD [Erwinia amylovora ATCC 49946]
gi|428784379|ref|ZP_19001870.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia amylovora ACW56400]
gi|291198535|emb|CBJ45643.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase]
[Erwinia amylovora ATCC 49946]
gi|291552864|emb|CBA19909.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia amylovora CFBP1430]
gi|426275941|gb|EKV53668.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia amylovora ACW56400]
Length = 367
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCV+V++ +I+ GY G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHMRAGEPHAEVHALRMA---GEKS 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+K+V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCEALIAAGVKRVVTAMQDPNPQVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G PWV++K+ +SLD +T++ + SQWITS E+R D
Sbjct: 124 HGLMMPEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|334131577|ref|ZP_08505339.1| Bifunctional riboflavin biosynthesis protein ribD
[Methyloversatilis universalis FAM5]
gi|333443050|gb|EGK71015.1| Bifunctional riboflavin biosynthesis protein ribD
[Methyloversatilis universalis FAM5]
Length = 366
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + +SPNPRVGCV+VKE RI+ G+ + G HAE+ AL A
Sbjct: 12 MARALKLAARGLWTTSPNPRVGCVLVKEGRIVGEGWHERAGEPHAEVHALRAAGEA---A 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNPLV+G G+A+L +AGI+
Sbjct: 69 RGATAYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPLVAGNGLARLRAAGIATD 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+NIGF SRM RG PWVR+K AS+LD T+L N SQWIT +R D H W
Sbjct: 129 CGVLENEARELNIGFVSRMTRGKPWVRLKTASTLDGVTALENGVSQWITGPAARRDGHRW 188
Query: 180 RARSCAILTG 189
RAR+CA+L+G
Sbjct: 189 RARACAVLSG 198
>gi|359433668|ref|ZP_09223989.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20652]
gi|357919682|dbj|GAA60238.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20652]
Length = 378
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCV+VK +II G+ + G HAE++AL A G + +T Y+TLEPC
Sbjct: 27 FTTTPNPNVGCVLVKNNQIIGEGFHQLAGQGHAEVNAL---AIAGNNAQGATAYVTLEPC 83
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E L +G+ KVI A+ D NP V+GKG+ L AGI V GL++ +A +N
Sbjct: 84 SHYGRTPPCAEGLKAAGVVKVIAAMVDTNPQVAGKGLKILSDAGIEVAYGLLESQARALN 143
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
+GFF RM++G+P+V K+A+S+D KT+L N S+WIT +R D ++RA+SCAILTG +
Sbjct: 144 VGFFKRMEQGLPYVTCKMAASIDGKTALKNGQSKWITGSAARQDVQLYRAQSCAILTGAD 203
>gi|226942824|ref|YP_002797897.1| riboflavin biosynthesis protein RibD [Azotobacter vinelandii DJ]
gi|226717751|gb|ACO76922.1| riboflavin biosynthesis protein RibD [Azotobacter vinelandii DJ]
Length = 361
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV RI+ G+ G HAE+ AL A G
Sbjct: 1 MARALELARQGLYSTHPNPRVGCVIVAAGRIVGEGWHVRAGEPHAEVHALRQA---GETA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EAL+ +G+ +V+ A+ DPNP VSG+G+A+L AGI V+
Sbjct: 58 RGATAYVTLEPCSHHGRTPPCAEALVAAGVGRVVAAMQDPNPQVSGRGLARLRQAGIEVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P VR+K+A SLD +T++ + SQWIT +R
Sbjct: 118 VGVLEAEARALNAGFVKRMEHGLPLVRVKLAMSLDGRTAMASGESQWITGAPARAAVQRL 177
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 178 RARSSVVLTGAD 189
>gi|421779041|ref|ZP_16215536.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis RH4]
gi|407813819|gb|EKF84598.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis RH4]
Length = 350
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ AK I + PNP VGCV+VK+ +I GY G HAEI AL +A AQG+D
Sbjct: 14 MQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYHPKAGQPHAEIFALADAKAQGFDT 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI + +++V++A DPNP V+G G+ +L +AGI V
Sbjct: 74 KGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGNGIKKLQNAGIEVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A +N+GF M+ G+P+VR+K ASSLD +T+ + S+WIT E+R D
Sbjct: 134 VGVCDQQAAALNLGFLKAMRTGLPYVRLKTASSLDGRTATASGESKWITGIEAREDVQRL 193
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 194 RAKSAAIVTG 203
>gi|422672002|ref|ZP_16731367.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aceris str. M302273]
gi|424069602|ref|ZP_17807048.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|330969741|gb|EGH69807.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aceris str. M302273]
gi|407994358|gb|EKG34940.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 378
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|422633294|ref|ZP_16698440.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. pisi str. 1704B]
gi|330943560|gb|EGH45897.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 245
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|197335179|ref|YP_002155463.1| riboflavin biosynthesis protein RibD [Vibrio fischeri MJ11]
gi|197316669|gb|ACH66116.1| riboflavin biosynthesis protein RibD [Vibrio fischeri MJ11]
Length = 363
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 129/189 (68%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ AK I ++PNP VGCV+VK+ +I+ G G HAE+ AL A G +
Sbjct: 2 MQKAILLAKQGIYTTAPNPNVGCVLVKDGKIVGEGAHLKAGEPHAEVHALRQA---GKEA 58
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+G+KKVI A+ DPNP V+G+G+A L AGI
Sbjct: 59 QGATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLNEAGIETA 118
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F +RM+ G P+V++K+A+SLD KT+L N SQWITSKE+R D +
Sbjct: 119 SGLLEADARALNPHFLTRMETGKPFVQLKMAASLDGKTALKNGVSQWITSKEARQDVQRY 178
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 179 RAQSGAILS 187
>gi|190572771|ref|YP_001970616.1| deaminase [Stenotrophomonas maltophilia K279a]
gi|190010693|emb|CAQ44302.1| putative deaminase [Stenotrophomonas maltophilia K279a]
Length = 361
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + + + PNP VGCVI +R++ G+ + GG HAE+ AL A G +
Sbjct: 13 MANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVFALREA---GSEA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V G G L +AGI V
Sbjct: 70 RGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDLLRNAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GLM +A E+N GF SR++R PW+R+K+A+SLD +T++ + SS+WIT +R D W
Sbjct: 130 EGLMAAQARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGPAAREDVQHW 189
Query: 180 RARSCAILTGKN 191
RAR+ AILTG +
Sbjct: 190 RARAGAILTGAD 201
>gi|323497966|ref|ZP_08102975.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
[Vibrio sinaloensis DSM 21326]
gi|323317011|gb|EGA70013.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
[Vibrio sinaloensis DSM 21326]
Length = 368
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+ AK + ++PNP VGCVI + + ++ G+ G HAE+ AL A Q
Sbjct: 12 MSRAIDLAKGGVYTTAPNPNVGCVITRNEEVVGEGFHYRAGEPHAEVHALRMAGEQSV-- 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + KVI A DPNP V+G+G+ L AGI V+
Sbjct: 70 -GATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICASQDPNPQVAGRGIKMLRDAGIEVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA +N GF RM+ G+P+V++K+A+SLD +T+L N SQWITS ++R D W
Sbjct: 129 VGLLEQEALALNPGFIKRMKTGLPYVQLKMAASLDGQTALANGQSQWITSPQARQDVQQW 188
Query: 180 RARSCAILT 188
RARS AIL+
Sbjct: 189 RARSGAILS 197
>gi|296114110|ref|YP_003628048.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis RH4]
gi|295921804|gb|ADG62155.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BBH18]
Length = 350
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ AK I + PNP VGCV+VK+ +I GY G HAEI AL +A AQG+D
Sbjct: 14 MQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYHPKAGQPHAEIFALADAKAQGFDT 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI + +++V++A DPNP V+G G+ +L +AGI V
Sbjct: 74 KGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGNGIKKLQNAGIEVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A +N+GF M+ G+P+VR+K ASSLD +T+ + S+WIT E+R D
Sbjct: 134 VGVCDQQAAALNLGFLKAMRTGLPYVRLKTASSLDGRTATASGESKWITGIEAREDVQRL 193
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 194 RAKSAAIVTG 203
>gi|410620475|ref|ZP_11331346.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
polaris LMG 21857]
gi|410159960|dbj|GAC35484.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
polaris LMG 21857]
Length = 372
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M LA++ A K +SPNP VGCVI + II G+ K G HAEI AL A Q
Sbjct: 12 MALAIRLAEKGQYTTSPNPNVGCVITDSQGHIIGQGWHKKAGTAHAEIHALAEAGEQ--- 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPCS+ G T PC +AL+ +GIK+V+ A+ DPNPLV+G G+ +L +AG+ V
Sbjct: 69 ANGATAYVTLEPCSHHGRTGPCAQALLNAGIKRVVAAMVDPNPLVAGNGLKKLNAAGVEV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
GL++ EA +N GF RM G PWV +K+ASSLD KT+L+N SQWIT +R D
Sbjct: 129 SSGLLENEAKRLNRGFIKRMTTGQPWVTVKLASSLDGKTALHNGLSQWITGPLARQDVQR 188
Query: 179 WRARSCAILTG 189
RARSCAIL+G
Sbjct: 189 HRARSCAILSG 199
>gi|59711307|ref|YP_204083.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Vibrio fischeri ES114]
gi|59479408|gb|AAW85195.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Vibrio fischeri ES114]
Length = 372
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ AK I ++PNP VGCV+VK +II G G HAE+ AL A G +
Sbjct: 11 MQKAILLAKQGIYTTAPNPNVGCVLVKNGKIIGEGAHLKAGEPHAEVHALRQA---GKEA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+G+KKVI A+ DPNP V+G+G+A L AGI
Sbjct: 68 QGATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLDEAGIETA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F +RM+ G P+V++K+A+SLD KT+L N SQWITSKE+R D +
Sbjct: 128 SGLLEADARALNPHFLTRMETGKPFVQLKMAASLDGKTALKNGVSQWITSKEARQDVQRY 187
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 188 RAQSGAILS 196
>gi|260772212|ref|ZP_05881128.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio metschnikovii CIP 69.14]
gi|260611351|gb|EEX36554.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio metschnikovii CIP 69.14]
Length = 369
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 131/189 (69%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A+ ++PNP+VGCVI ++ RI+ G+ G HAE+ AL A+ Y
Sbjct: 13 MARAIQLAQRGRFTTAPNPKVGCVITQQGRIVGEGFHYRAGQPHAEVHAL--RMAKEY-A 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LI++G+ KVI A+ DPNP VSG+G+A L AGI V+
Sbjct: 70 RGATAYVTLEPCSHYGRTPPCAEGLIQAGVAKVICAMQDPNPQVSGRGIAMLREAGIEVE 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F RMQ G+P+V++K+A+SLD +T+L N SQWITS ++R D ++
Sbjct: 130 VGLLEADAKVLNPAFIKRMQTGMPYVQLKLAASLDGQTALANGESQWITSAQARQDVQVY 189
Query: 180 RARSCAILT 188
RA++ A+L+
Sbjct: 190 RAQAGAVLS 198
>gi|416216275|ref|ZP_11623599.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis 7169]
gi|416237955|ref|ZP_11631310.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC1]
gi|326561735|gb|EGE12070.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis 7169]
gi|326569043|gb|EGE19112.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC1]
Length = 350
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ AK I + PNP VGCV+VK+ +I GY G HAEI AL +A AQG+D
Sbjct: 14 MQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYHPKAGQPHAEIFALADAKAQGFDT 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI + +++V++A DPNP V+G G+ +L +AGI V
Sbjct: 74 KGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGNGIKKLQNAGIEVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A +N+GF M+ G+P+VR+K ASSLD +T+ + S+WIT E+R D
Sbjct: 134 VGVCDQQAAALNLGFLKAMRTGLPYVRLKTASSLDGRTATASGESKWITGIEAREDVQRL 193
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 194 RAKSAAIVTG 203
>gi|66047689|ref|YP_237530.1| riboflavin biosynthesis protein RibD:riboflavin-specific deaminase,
C-terminal, partial [Pseudomonas syringae pv. syringae
B728a]
gi|63258396|gb|AAY39492.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas syringae pv. syringae B728a]
Length = 366
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 1 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 58 RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 118 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 177
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 178 RAQSSVVLSGAD 189
>gi|456737924|gb|EMF62601.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Stenotrophomonas maltophilia EPM1]
Length = 372
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + + + PNP VGCVI +R++ G+ + GG HAE+ AL A G +
Sbjct: 24 MANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVFALREA---GSEA 80
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V G G L +AGI V
Sbjct: 81 RGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDLLRNAGIEVA 140
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GLM +A E+N GF SR++R PW+R+K+A+SLD +T++ + SS+WIT +R D W
Sbjct: 141 EGLMATQARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGPAAREDVQHW 200
Query: 180 RARSCAILTGKN 191
RAR+ AILTG +
Sbjct: 201 RARAGAILTGAD 212
>gi|424667036|ref|ZP_18104061.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia
Ab55555]
gi|401069705|gb|EJP78226.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia
Ab55555]
Length = 361
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + + + PNP VGCVI +R++ G+ + GG HAE+ AL A G +
Sbjct: 13 MANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVFALREA---GSEA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V G G L +AGI V
Sbjct: 70 RGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDLLRNAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GLM +A E+N GF SR++R PW+R+K+A+SLD +T++ + SS+WIT +R D W
Sbjct: 130 EGLMATQARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGPAAREDVQHW 189
Query: 180 RARSCAILTGKN 191
RAR+ AILTG +
Sbjct: 190 RARAGAILTGAD 201
>gi|403057497|ref|YP_006645714.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402804823|gb|AFR02461.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 378
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 17 MARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMA---GERA 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 74 RGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAVS 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 134 HGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 193
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 194 RAESAAILS 202
>gi|422640736|ref|ZP_16704162.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae Cit 7]
gi|440742672|ref|ZP_20921995.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae
BRIP39023]
gi|330953126|gb|EGH53386.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae Cit 7]
gi|440376976|gb|ELQ13633.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae
BRIP39023]
Length = 378
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGVTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|227113442|ref|ZP_03827098.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 378
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 17 MARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMA---GERA 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 74 RGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAVS 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 134 HGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 193
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 194 RAESAAILS 202
>gi|343497592|ref|ZP_08735655.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
nigripulchritudo ATCC 27043]
gi|342817784|gb|EGU52660.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
nigripulchritudo ATCC 27043]
Length = 365
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI K+ +I+ G G HAE+ AL A G + +T Y+TLEPC
Sbjct: 23 FTTSPNPNVGCVIAKDGKIVGEGLHFKAGEPHAEVHAL---RAAGENAKGATAYVTLEPC 79
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC+EALIK+G+ +V+ A+ DPNP+V+G+GV L AG+ V+ G+++ +A +N
Sbjct: 80 SHYGRTPPCSEALIKAGVARVVCAMQDPNPVVAGRGVKMLRDAGVEVEVGVLESDARALN 139
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P+V++K+A+SLD +T+L N S+WITS ++R D +RA+SCAI++
Sbjct: 140 KGFLKRMETGKPFVQLKLAASLDGQTALSNGESKWITSPQARQDVQAYRAQSCAIVS 196
>gi|238755138|ref|ZP_04616485.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri
ATCC 29473]
gi|238706698|gb|EEP99068.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri
ATCC 29473]
Length = 369
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 130/189 (68%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L +SPNP VGCVIV++ +I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTSPNPNVGCVIVRDGKIVGEGYHLRAGEPHAEVHALRMA---GDAA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +GI++V+ A+ DPNP V+G+G+ QL AGI+V+
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALVAAGIRRVVTAMQDPNPQVAGRGLYQLKQAGITVE 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P++++K+A+SLD +T++ + S+WITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYLQLKMATSLDGRTAMASGESKWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 185 RAQSSAILS 193
>gi|392422575|ref|YP_006459179.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri CCUG
29243]
gi|390984763|gb|AFM34756.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri CCUG
29243]
Length = 366
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A + S+ PNPRVGCVIV + ++ G+ G HAE+ AL A G
Sbjct: 8 MARALQLACRGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQA---GERA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EAL+K+G+ +V+ A+ DPNP V+G G+ L SAGI V
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLELLRSAGIEVA 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 125 SGVLEGEARELNAGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 184
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 185 RARSSVVLTGAD 196
>gi|424074097|ref|ZP_17811508.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407995044|gb|EKG35592.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 378
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPDVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|294648973|ref|ZP_06726421.1| riboflavin biosynthesis protein RibD [Acinetobacter haemolyticus
ATCC 19194]
gi|292825108|gb|EFF83863.1| riboflavin biosynthesis protein RibD [Acinetobacter haemolyticus
ATCC 19194]
Length = 366
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ A+L ++ PNP VGCVIVK+ +I+ G+ G HAE+ AL A G +
Sbjct: 16 MQRAIDLARLGQYSTKPNPNVGCVIVKDGQILGEGFHPKAGQPHAEVFALRQA---GENA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++TVY+TLEPC+++G TPPC EAL+K+ +KKV+IA +DPNPLV+GKGV L AGI V+
Sbjct: 73 KDATVYVTLEPCAHYGRTPPCAEALVKAQVKKVVIACSDPNPLVAGKGVKILQDAGIEVE 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ + A +N+GF M G+P+VR+KIASSLD +T++ + S+WIT +R D W
Sbjct: 133 TGVCTENAKGLNLGFLKAMSTGLPYVRLKIASSLDGRTAMASGESKWITGTLARQDVQHW 192
Query: 180 RARSCAILTG 189
RA S A++TG
Sbjct: 193 RAISGAVITG 202
>gi|227327505|ref|ZP_03831529.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 378
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 17 MARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMA---GERA 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 74 RGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAVS 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 134 HGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 193
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 194 RAESAAILS 202
>gi|352080161|ref|ZP_08951230.1| riboflavin biosynthesis protein RibD [Rhodanobacter sp. 2APBS1]
gi|351684870|gb|EHA67939.1| riboflavin biosynthesis protein RibD [Rhodanobacter sp. 2APBS1]
Length = 365
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVI ++ G+ + G HAE+ AL A G
Sbjct: 13 MAHALRLAERGLYTTQPNPRVGCVIAHGDAVVGTGFHRRAGEPHAEVFALREA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC +ALI + + +V++A D P V G+G+ +L AGI+V
Sbjct: 70 RGATAYVTLEPCAHHGRTPPCADALIAASVGRVVVAAEDTFPQVDGRGIGKLRDAGITVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM++ A +N+GFFSR++RG P+VR+K+A SLD +T+L + S+WIT + +R D W
Sbjct: 130 SGLMREAARALNVGFFSRIERGRPFVRLKLAMSLDGRTALASGESKWITGEAARADVQRW 189
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 190 RARSSAILTG 199
>gi|254281521|ref|ZP_04956489.1| riboflavin biosynthesis protein RibD [gamma proteobacterium
NOR51-B]
gi|219677724|gb|EED34073.1| riboflavin biosynthesis protein RibD [gamma proteobacterium
NOR51-B]
Length = 371
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 124/176 (70%), Gaps = 3/176 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNP VGCV+V E ++I G+T+ GGNHAEI+AL +A A D +T Y+TLEPC++
Sbjct: 24 ATPNPHVGCVLVHEGKVIGEGFTQPAGGNHAEIEALEHATA---DPSGATAYVTLEPCAH 80
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
G T PC +ALI +G+ +V++A+ DP P V G+G+ +L +AGI V G++ +A ++ G
Sbjct: 81 TGRTGPCADALIDAGLTRVVVAVGDPYPAVDGRGIDRLRAAGIEVSVGVLAVQASDLMAG 140
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F RMQRG VR+K+A+SLD +T++ + SQWIT E+R+D RA SCAI+TG
Sbjct: 141 FLMRMQRGWGRVRLKMAASLDGRTAMASGESQWITGVEARSDVQRLRAESCAIVTG 196
>gi|443642093|ref|ZP_21125943.1| Riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
syringae B64]
gi|443282110|gb|ELS41115.1| Riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
syringae B64]
Length = 378
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALVEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|332307440|ref|YP_004435291.1| riboflavin biosynthesis protein RibD [Glaciecola sp. 4H-3-7+YE-5]
gi|332174769|gb|AEE24023.1| riboflavin biosynthesis protein RibD [Glaciecola sp. 4H-3-7+YE-5]
Length = 372
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 129/191 (67%), Gaps = 5/191 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M LA++ A K +SPNP VGCV+ K I+ G+ + G HAEI A+ A G
Sbjct: 12 MALAIRLAEKGQYTTSPNPNVGCVLTDPKGNIVGQGWHQKAGTPHAEIHAIAQA---GER 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPC++ G T PC+EALIK+G+ +V+ A+ DPNPLV+G G+ +L AG++V
Sbjct: 69 TKGATAYVTLEPCNHHGRTGPCSEALIKAGVSRVVAAMVDPNPLVAGSGLQKLSDAGVAV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
GL+++EA +N+GF RM+ G+PWV +K+ASSLD KT+L N SQWIT +R D
Sbjct: 129 SSGLLEREAKALNLGFIKRMKTGMPWVTVKLASSLDGKTALNNGESQWITGPLAREDVQR 188
Query: 179 WRARSCAILTG 189
RA+SCAIL+G
Sbjct: 189 HRAKSCAILSG 199
>gi|312171548|emb|CBX79806.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia amylovora ATCC BAA-2158]
Length = 367
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCV+V++ +I+ GY G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHMRAGEPHAEVHALRMA---GEKS 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+K+V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCEALIAAGVKRVVTAMQDPNPQVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M EA +N GF RM+ G PWV++K+ +SLD +T++ + SQWITS E+R D
Sbjct: 124 HGMMMPEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|50120065|ref|YP_049232.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pectobacterium atrosepticum SCRI1043]
gi|49610591|emb|CAG74036.1| riboflavin biosynthesis protein [Pectobacterium atrosepticum
SCRI1043]
Length = 369
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 8 MARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMA---GERA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGITVS 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESAAILS 193
>gi|194364355|ref|YP_002026965.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia
R551-3]
gi|194347159|gb|ACF50282.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia
R551-3]
Length = 361
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + + + PNP VGCVI +R++ G+ + GG HAE+ AL A G +
Sbjct: 13 MANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVFALREA---GSEA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V G G L +AGI V
Sbjct: 70 RGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDLLRNAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GLM +A E+N GF SR++R PW+R+K+A+SLD +T++ + SS+WIT +R D W
Sbjct: 130 EGLMAAQARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGPAAREDVQHW 189
Query: 180 RARSCAILTGKN 191
RAR+ AILTG +
Sbjct: 190 RARAGAILTGAD 201
>gi|389796187|ref|ZP_10199243.1| riboflavin biosynthesis protein RibD [Rhodanobacter sp. 116-2]
gi|388448827|gb|EIM04807.1| riboflavin biosynthesis protein RibD [Rhodanobacter sp. 116-2]
Length = 353
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVI ++ G+ + G HAE+ AL A G
Sbjct: 1 MAHALRLAERGLYTTQPNPRVGCVIAHGDAVVGTGFHRRAGEPHAEVFALREA---GERA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC +ALI + + +V++A D P V G+G+ +L AGI+V
Sbjct: 58 RGATAYVTLEPCAHHGRTPPCADALIAASVGRVVVAAEDTFPQVDGRGIGKLRDAGITVA 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM++ A +N+GFFSR++RG P+VR+K+A SLD +T+L + S+WIT + +R D W
Sbjct: 118 SGLMREAARALNVGFFSRIERGRPFVRLKLAMSLDGRTALASGESKWITGEAARADVQRW 177
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 178 RARSSAILTG 187
>gi|416156365|ref|ZP_11604497.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
101P30B1]
gi|416224789|ref|ZP_11626693.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
103P14B1]
gi|326562323|gb|EGE12649.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
103P14B1]
gi|326575527|gb|EGE25452.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
101P30B1]
Length = 350
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ +AK I + PNP VGCV+VK+ +I GY G HAEI AL +A A+G+D
Sbjct: 14 MQLAIAEAKKGIYTTRPNPAVGCVLVKDSLVIGQGYHPKAGQPHAEIFALADAKARGFDT 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI + +++V++A DPNP V+G G+ +L +AGI V
Sbjct: 74 KGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGNGIKKLQNAGIEVL 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A +N+GF M+ G+P+VR+K ASSLD +T+ + S+WIT E+R D
Sbjct: 134 VGVCDQQAAALNLGFLKAMRTGLPYVRLKTASSLDGRTATASGESKWITGIEAREDVQRL 193
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 194 RAKSAAIVTG 203
>gi|28199619|ref|NP_779933.1| riboflavin-specific deaminase [Xylella fastidiosa Temecula1]
gi|182682363|ref|YP_001830523.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa M23]
gi|386083698|ref|YP_005999980.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558673|ref|ZP_12209635.1| Pyrimidine reductase, riboflavin biosynthesis RibD [Xylella
fastidiosa EB92.1]
gi|28057734|gb|AAO29582.1| riboflavin-specific deaminase [Xylella fastidiosa Temecula1]
gi|182632473|gb|ACB93249.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa M23]
gi|307578645|gb|ADN62614.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338178753|gb|EGO81736.1| Pyrimidine reductase, riboflavin biosynthesis RibD [Xylella
fastidiosa EB92.1]
Length = 364
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV++ ++ G+ + G HAE+ AL A G +T Y+TLEPC+
Sbjct: 25 TTRPNPMVGCVIVRDGEVVGEGWHQRAGDPHAEVFAL---CAAGDRARGATAYVTLEPCA 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC ALI +G+++V+ A+ DP PLV+G GV L +AG++V+ GLM+ +A +N
Sbjct: 82 HSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGVTLLRAAGVTVEHGLMEAQARALNR 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PWVR+K+ SSLD +T+L + S+WIT + +R D WRAR+ AILTG
Sbjct: 142 GFLSRVERGRPWVRIKLGSSLDGRTALASGESKWITGEAARADVQRWRARASAILTGAG 200
>gi|422619295|ref|ZP_16687986.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
japonica str. M301072]
gi|330899666|gb|EGH31085.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
japonica str. M301072]
Length = 301
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGLTGVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|403050685|ref|ZP_10905169.1| ribD [Acinetobacter bereziniae LMG 1003]
Length = 370
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AKL S+ PNP VGCVIVK+ +I G+ G HAE+ A+ A G
Sbjct: 21 MQKAIELAKLGQYSTRPNPNVGCVIVKDGVLIGEGFHPQAGQPHAEVFAMRQA---GASA 77
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC + L+++G+ KVI+A DPNPLV+GKGV L AGI V+
Sbjct: 78 KGATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVIVACADPNPLVAGKGVEILRQAGIVVE 137
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ +++A ++N+GF M G+P+VR+K+ASSLD +T++ + S+WIT ESR D W
Sbjct: 138 TGVCEQQATQLNLGFLKAMATGLPYVRLKVASSLDGRTAMASGESKWITGAESRQDVQHW 197
Query: 180 RARSCAILTG 189
RA S A++TG
Sbjct: 198 RAISGAVITG 207
>gi|423685431|ref|ZP_17660239.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Vibrio fischeri SR5]
gi|371495343|gb|EHN70939.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Vibrio fischeri SR5]
Length = 372
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ AK I ++PNP VGCV+VK +I+ G G HAE+ AL A G +
Sbjct: 11 MQKAILLAKQGIYTTAPNPNVGCVLVKNGKIVGEGAHLKAGEPHAEVHALRQA---GKEA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+G+KKVI A+ DPNP V+G+G+A L AGI
Sbjct: 68 QGATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLNEAGIETA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F +RM+ G P+V++K+A+SLD KT+L N SQWITSKE+R D +
Sbjct: 128 SGLLEADARALNPHFLTRMETGKPFVQLKMAASLDGKTALKNGVSQWITSKEARQDVQRY 187
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 188 RAQSGAILS 196
>gi|386717053|ref|YP_006183379.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Stenotrophomonas maltophilia D457]
gi|384076615|emb|CCH11198.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Stenotrophomonas maltophilia D457]
Length = 372
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + + + PNP VGCVI +R++ G+ + GG HAE+ AL A G +
Sbjct: 24 MANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVFALREA---GTEA 80
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V G G L +AGI V
Sbjct: 81 RGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDLLRNAGIDVA 140
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GLM +A E+N GF SR++R PW+R+K+A+SLD +T++ + SS+WIT +R D W
Sbjct: 141 EGLMAVQARELNKGFLSRVERNRPWLRVKLAASLDGRTAMADGSSKWITGPAAREDVQHW 200
Query: 180 RARSCAILTGKN 191
RAR+ AILTG +
Sbjct: 201 RARAGAILTGAD 212
>gi|244539054|dbj|BAH83097.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Candidatus Ishikawaella capsulata Mpkobe]
Length = 371
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 129/193 (66%), Gaps = 10/193 (5%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDAL----LNAAAQ 55
M+ AL+ AK +SPNP VGCVIVK II G+ + G +HAEI+AL +N A+
Sbjct: 7 MSRALELAKRGRFTTSPNPNVGCVIVKNNHIIGEGWHQRAGEDHAEINALKKITVNKQAE 66
Query: 56 GYDVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAG 115
G +TVY+TLEPCS+FG PPC ALI +GIK+V+ A+ DPNP V+G+G L AG
Sbjct: 67 G-----ATVYVTLEPCSHFGKVPPCCNALINAGIKRVVAAMTDPNPRVNGRGFHLLKQAG 121
Query: 116 ISVKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRND 175
I VKQGLM +A +N GF RM+ G+P++R+K+A S+D +T++ S+WITS SR D
Sbjct: 122 IEVKQGLMINQAKMLNRGFIKRMKTGLPFIRLKLAMSIDGRTAMQTGESKWITSVTSRRD 181
Query: 176 SHIWRARSCAILT 188
+ RA S A+L+
Sbjct: 182 VQVMRAESSALLS 194
>gi|85712650|ref|ZP_01043696.1| Riboflavin-specific deaminase/reductase [Idiomarina baltica OS145]
gi|85693500|gb|EAQ31452.1| Riboflavin-specific deaminase/reductase [Idiomarina baltica OS145]
Length = 373
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNP VGCVIVK+ I+ G+ + G HAE+ AL A Q
Sbjct: 14 MHRALELARKGRFTTGPNPAVGCVIVKDASIVGEGWHQKAGEPHAEVFALRQAGTQAK-- 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++T Y+TLEPCS+ G TPPC +ALI + + +V+IA+ DPNP+VSG+G+ +L A I V+
Sbjct: 72 -HATAYVTLEPCSHQGRTPPCVDALINAEVARVVIAMQDPNPVVSGRGIHKLHDADIEVR 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + A +N GF RMQ +P+VR+K+ASSLD +T+L N SQWIT +R D +W
Sbjct: 131 VGLFETAARALNPGFIHRMQTQLPYVRVKLASSLDGRTALSNGVSQWITGAAARADVQVW 190
Query: 180 RARSCAILTGKN 191
RA++ AILTG +
Sbjct: 191 RAQADAILTGAD 202
>gi|421083023|ref|ZP_15543902.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pectobacterium wasabiae CFBP 3304]
gi|401702249|gb|EJS92493.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pectobacterium wasabiae CFBP 3304]
Length = 388
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 27 MARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMA---GEHA 83
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 84 RGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGITVS 143
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M EA ++N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 144 HGVMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 203
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 204 RAESAAILS 212
>gi|445412737|ref|ZP_21433294.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. WC-743]
gi|444766787|gb|ELW91046.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. WC-743]
Length = 370
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AKL S+ PNP VGCVIVK+ +I G+ G HAE+ A+ A G
Sbjct: 21 MQKAIELAKLGQYSTRPNPNVGCVIVKDGVLIGEGFHPQAGQPHAEVFAMRQA---GASA 77
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC + L+++G+ KVI+A DPNPLV+GKGV L AGI V+
Sbjct: 78 KGATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVIVACADPNPLVAGKGVEILRQAGIVVE 137
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ +++A ++N+GF M G+P+VR+K+ASSLD +T++ + S+WIT ESR D W
Sbjct: 138 TGVCEQQATQLNLGFLKAMATGLPYVRLKVASSLDGRTAMASGESKWITGAESRQDVQHW 197
Query: 180 RARSCAILTG 189
RA S A++TG
Sbjct: 198 RAISGAVITG 207
>gi|410647318|ref|ZP_11357753.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
agarilytica NO2]
gi|410133173|dbj|GAC06152.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
agarilytica NO2]
Length = 372
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 128/191 (67%), Gaps = 5/191 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M LA++ A K +SPNP VGCVI K I+ G+ + G HAEI A+ A G
Sbjct: 12 MALAIRLAEKGQYTTSPNPNVGCVITDPKGNIVGQGWHQKAGTPHAEIHAIAQA---GER 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPC++ G T PC+EALIK+G+ +V+ A+ DPNPLV+G G+ +L AG++V
Sbjct: 69 TKGATAYVTLEPCNHHGRTGPCSEALIKAGVSRVVAAMVDPNPLVAGSGLQKLSDAGVAV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
GL++ EA +N+GF RM+ G+PWV +K+ASSLD KT+L N SQWIT +R D
Sbjct: 129 SSGLLEHEAKALNLGFIKRMKTGMPWVTVKLASSLDGKTALNNGESQWITGPLAREDVQR 188
Query: 179 WRARSCAILTG 189
RA+SCAIL+G
Sbjct: 189 HRAKSCAILSG 199
>gi|285019600|ref|YP_003377311.1| riboflavin biosynthesis protein RibD [Xanthomonas albilineans GPE
PC73]
gi|283474818|emb|CBA17317.1| probable riboflavin biosynthesis ribd oxidoreductase protein
[Xanthomonas albilineans GPE PC73]
Length = 369
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 12 MAQALRLAERGAYTTRPNPMVGCVIVRDDEQVGEGFHQRAGGPHAEVFAL---RAAGEYA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V++A+ DP P V+G G A L AGI+V+
Sbjct: 69 RGATAYVTLEPCAHYGRTPPCALALIEAGVARVVVAMADPFPQVNGGGFALLREAGIAVQ 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+++A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT +R D W
Sbjct: 129 SGLMEEQARALNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITGAAARQDVQRW 188
Query: 180 RARSCAILTGKN 191
RAR+ AIL+G
Sbjct: 189 RARAGAILSGAG 200
>gi|329118503|ref|ZP_08247207.1| riboflavin biosynthesis protein RibD [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465238|gb|EGF11519.1| riboflavin biosynthesis protein RibD [Neisseria bacilliformis ATCC
BAA-1200]
Length = 374
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNPRVGCVI + +I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 28 FTTSPNPRVGCVIARGGQIVGQGFHLRAGEPHAEVHALRQA---GELARGATAYVTLEPC 84
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
++ G TPPC +ALI +G+ +V+ A++DPNP V+GKG+A L +AGI+ + GL + EA E+N
Sbjct: 85 AHHGRTPPCAQALIAAGVSRVVAAVSDPNPQVAGKGLAMLAAAGIAAECGLFEAEARELN 144
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SR++RG P++R+K A+SLD KT+L + SQWIT + +R D HI RA SCA+LTG
Sbjct: 145 HGFLSRIERGRPFLRLKCAASLDGKTALSDGQSQWITDEATRADVHILRAESCAVLTG 202
>gi|26522770|dbj|BAC44857.1| pyrimidine deaminase/ pyrimidine reductase [Vibrio fischeri]
Length = 372
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ AK I ++PNP VGCV+VK+ +I+ G G HAE+ AL A G +
Sbjct: 11 MQKAILLAKQGIYTTAPNPNVGCVLVKDGKIVGEGAHLKAGEPHAEVHALRQA---GKEA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+G+KKVI A+ DPNP V+G+G+A L AGI
Sbjct: 68 QGATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLNEAGIETA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F +RM+ G P+V++K+A+SLD KT+L N SQWITSKE+R D +
Sbjct: 128 SGLLEADARALNPHFLTRMETGKPFVQLKMAASLDGKTALKNGVSQWITSKEARQDVQRY 187
Query: 180 RARSCAILT 188
RA+S AI +
Sbjct: 188 RAQSGAIFS 196
>gi|226939661|ref|YP_002794734.1| RibD [Laribacter hongkongensis HLHK9]
gi|226714587|gb|ACO73725.1| RibD [Laribacter hongkongensis HLHK9]
Length = 383
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 128/194 (65%), Gaps = 8/194 (4%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+L + S+ PNPRVGCV+V + ++ G+ G HAE AL A G
Sbjct: 10 MARALQLARLGMTSTAPNPRVGCVVVSDGQVAGEGWHVRAGTPHAERHAL---AMAGERA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +AL+++G+ +V+ A+ DPNPLV+G+G+ +L +AGI
Sbjct: 67 RGATAYVTLEPCSHFGRTPPCADALLQAGVGRVVAAMVDPNPLVAGQGMTRLAAAGIECA 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF SRM RG PW+ +K+ SLD KT+L + SQWIT ++R D +
Sbjct: 127 SGLLEAEACELNRGFVSRMTRGRPWLTVKLGISLDGKTALADGQSQWITGAQARAD--VM 184
Query: 180 RARSC--AILTGKN 191
R R+C ILTG
Sbjct: 185 RQRACHDVILTGSG 198
>gi|344206009|ref|YP_004791150.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia
JV3]
gi|343777371|gb|AEM49924.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia
JV3]
Length = 361
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + + + PNP VGCVI +R++ G+ + GG HAE+ AL A G +
Sbjct: 13 MANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVFALREA---GGEA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V G G L +AGI V
Sbjct: 70 RGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDLLRNAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GLM +A E+N GF SR++R PWVR+K+A+SLD +T++ + +S+WIT +R D W
Sbjct: 130 EGLMAVQARELNKGFLSRVERNRPWVRVKLAASLDGRTAMADGTSKWITGPAAREDVQHW 189
Query: 180 RARSCAILTGKN 191
RAR+ AILTG +
Sbjct: 190 RARAGAILTGAD 201
>gi|226951731|ref|ZP_03822195.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. ATCC 27244]
gi|226837521|gb|EEH69904.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. ATCC 27244]
Length = 366
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ A+L ++ PNP VGCVIVK+ +I+ G+ G HAE+ AL A G +
Sbjct: 16 MQRAIDLARLGQYSTKPNPNVGCVIVKDGKILGEGFHPKAGQPHAEVFALRQA---GENA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++T Y+TLEPC+++G TPPC EAL+K+ +KKV+IA +DPNPLV+GKGV L+ AGI V+
Sbjct: 73 KDATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVIACSDPNPLVAGKGVKILLDAGIEVE 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ + A +N+GF M G+P+VR+K+ASSLD +T++ + S+WIT +R D W
Sbjct: 133 TGVCTEIAKGLNLGFLKAMSAGLPYVRLKVASSLDGRTAMASGESKWITGAIARQDVQHW 192
Query: 180 RARSCAILTG 189
RA S A++TG
Sbjct: 193 RAISGAVITG 202
>gi|404400700|ref|ZP_10992284.1| riboflavin biosynthesis protein RibD [Pseudomonas fuscovaginae
UPB0736]
Length = 379
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K ++ PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGRYSTHPNPRVGCVIVRDGVVVGEGWHVRAGEPHAEVHALREA---GEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 72 RGATAYVTLEPCSHFGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGRGLKRLSDAGIAVH 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA IN GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARAINRGFLKRMEHGLPFVRIKLAMSLDGRTAMASGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA S +LTG +
Sbjct: 192 RAESSVVLTGAD 203
>gi|381173584|ref|ZP_09882668.1| riboflavin biosynthesis protein RibD [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|390989535|ref|ZP_10259832.1| riboflavin biosynthesis protein RibD [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372555804|emb|CCF66807.1| riboflavin biosynthesis protein RibD [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|380685964|emb|CCG39155.1| riboflavin biosynthesis protein RibD [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 369
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV++ + G+ + GG HAE+ AL A G +T Y+TLEPC+
Sbjct: 29 TTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELARGATAYVTLEPCA 85
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC ALI++G+++V+ A+ DP P V+G G A L AGI V G+MQ +A +N
Sbjct: 86 HYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIEVLSGVMQAQARTLNR 145
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PW+R+K+ +SLD +T+L + S+WITS ++R D WRAR+ AILTG
Sbjct: 146 GFLSRVERGRPWLRVKLGASLDGRTALASGESKWITSADARADVQRWRARAGAILTGAG 204
>gi|418521007|ref|ZP_13087053.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410702983|gb|EKQ61480.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 369
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV++ + G+ + GG HAE+ AL A G +T Y+TLEPC+
Sbjct: 29 TTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELARGATAYVTLEPCA 85
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC ALI++G+++V+ A+ DP P V+G G A L AGI V G+MQ +A +N
Sbjct: 86 HYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIEVLSGVMQAQARTLNR 145
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PW+R+K+ +SLD +T+L + S+WITS ++R D WRAR+ AILTG
Sbjct: 146 GFLSRVERGRPWLRVKLGASLDGRTALASGESKWITSADARADVQRWRARAGAILTGAG 204
>gi|409398019|ref|ZP_11248871.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. Chol1]
gi|409117525|gb|EKM93953.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. Chol1]
Length = 367
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + S+ PNPRVGCVIV + ++ G+ G HAE+ AL A G
Sbjct: 9 MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQA---GERA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ L SAGI V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGRGLQLLRSAGIEVA 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 126 SGVLEAEARELNCGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 185
Query: 180 RARSCAILTGKN 191
RA S +LTG +
Sbjct: 186 RAGSSVVLTGAD 197
>gi|77361290|ref|YP_340865.1| riboflavin biosynthesis protein [Pseudoalteromonas haloplanktis
TAC125]
gi|76876201|emb|CAI87423.1| Riboflavin biosynthesis protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 382
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCV+VK I+ G+ + G HAE++AL A G
Sbjct: 15 MARAIELAKKGRFTTTPNPNVGCVLVKNNEIVGEGFHQLAGQGHAEVNAL---AMAGSKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E L +G+ KVI A+ D NP V+GKG+ L AGI V
Sbjct: 72 KGATAYVTLEPCSHYGRTPPCAEGLKAAGVVKVIAAMVDSNPQVAGKGLKILSDAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N+GFF RM+ G+P+V K+A+S+D KT+L N S+WIT +R D ++
Sbjct: 132 YGLLEAQARALNLGFFKRMEHGLPYVTCKMAASIDGKTALNNGQSKWITGAAARQDVQLY 191
Query: 180 RARSCAILTGKN 191
RA+SCAILTG +
Sbjct: 192 RAQSCAILTGAD 203
>gi|386309522|ref|YP_006005578.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418243764|ref|ZP_12870219.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433550599|ref|ZP_20506643.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Yersinia
enterocolitica IP 10393]
gi|318604604|emb|CBY26102.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia enterocolitica subsp. palearctica Y11]
gi|351776734|gb|EHB19030.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431789734|emb|CCO69683.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Yersinia
enterocolitica IP 10393]
Length = 369
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L +SPNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+K+V+ A+ DPNP V+G+G+ +L AG+ V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P++++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 185 RAQSSAILS 193
>gi|229513912|ref|ZP_04403374.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae TMA 21]
gi|229349093|gb|EEO14050.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae TMA 21]
Length = 367
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++++A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEEDARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|238765182|ref|ZP_04626114.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
kristensenii ATCC 33638]
gi|238696616|gb|EEP89401.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
kristensenii ATCC 33638]
Length = 369
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L +SPNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTSPNPNVGCVVVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+K+V+ A+ DPNP V+G+G+ +L AG+ V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P++++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 185 RAQSSAILS 193
>gi|398798201|ref|ZP_10557502.1| riboflavin biosynthesis protein RibD [Pantoea sp. GM01]
gi|398100918|gb|EJL91146.1| riboflavin biosynthesis protein RibD [Pantoea sp. GM01]
Length = 367
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV+E I+ G+ + G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVIVREGEIVGEGWHQRAGEPHAEVHALRMA---GERA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G PW+++K+ +SLD +T++ N SQWITS +R D
Sbjct: 124 HGLMMSEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMANGESQWITSAAARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|71731320|gb|EAO33384.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Xylella fastidiosa subsp. sandyi Ann-1]
Length = 364
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV++ ++ G+ + G HAE+ AL A G +T Y+TLEPC+
Sbjct: 25 TTRPNPMVGCVIVRDGEVVGEGWHQRAGDPHAEVFAL---CAAGDLARGATAYVTLEPCA 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC ALI +G+++V+ A+ DP PLV+G GV L +AG++V+ GLM+ +A +N
Sbjct: 82 HSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGVTLLRAAGVTVEHGLMEAQARALNR 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PWVR+K+ SSLD +T+L + S+WIT + +R D WRAR+ AILTG
Sbjct: 142 GFLSRVERGRPWVRIKLGSSLDGRTALASGESKWITGEAARVDVQRWRARASAILTGAG 200
>gi|254523112|ref|ZP_05135167.1| riboflavin biosynthesis protein RibD [Stenotrophomonas sp. SKA14]
gi|219720703|gb|EED39228.1| riboflavin biosynthesis protein RibD [Stenotrophomonas sp. SKA14]
Length = 396
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVI +R++ G+ + GG HAE+ AL A G + +T Y+TLEPC+
Sbjct: 61 TTRPNPMVGCVIAHGERVVGQGWHQRAGGPHAEVFALREA---GSEARGATAYVTLEPCA 117
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC ALI++G+ +V+ A+ DP P V G G L AGI V +GLM +A E+N
Sbjct: 118 HYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFDLLREAGIDVSEGLMAAQARELNK 177
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++R PW+R+K+A+SLD +T++ + +S+WIT +R D WRAR+ AILTG +
Sbjct: 178 GFLSRVERNRPWLRVKLAASLDGRTAMADGTSKWITGAAAREDVQHWRARAGAILTGAD 236
>gi|94677040|ref|YP_589028.1| riboflavin biosynthesis protein RibD [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|94220190|gb|ABF14349.1| riboflavin biosynthesis protein RibD [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 378
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 130/189 (68%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
+ LA + A+ + ++PNP VGCVI+++ R++ GY G HAEI AL A A Y
Sbjct: 8 LALAFKLARRGKLTTAPNPNVGCVIIRDHRVVGEGYHVRAGEPHAEIHALRMAGAMAY-- 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T YITLEPC+++G+TPPCTEALI +GI +V+ A+ DPNP V+G+G+ +L A I V+
Sbjct: 66 -GATAYITLEPCNHYGHTPPCTEALIAAGISRVVAAMLDPNPKVNGRGLYRLQQANIEVR 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+M ++A IN GF RM+ G+PW+R+K+A+SLD +T++ + S WITS ++R D +
Sbjct: 125 HSIMLQDAEMINKGFLKRMRTGLPWIRVKLATSLDGRTAMASGESSWITSNQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESDAILS 193
>gi|400406356|ref|YP_006589104.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [secondary
endosymbiont of Heteropsylla cubana]
gi|400364609|gb|AFP85676.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [secondary
endosymbiont of Heteropsylla cubana]
Length = 375
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVIV+ I+ GY + G HAE+ AL A D +T Y+TLEPC
Sbjct: 20 FTTSPNPNVGCVIVRNGYIVGEGYHQCAGTEHAEVHALRQAKD---DSRGATAYVTLEPC 76
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
++ G TP CT ALI +G+K+VI I DPNP V+G G +L AG+ V+ GLMQ EA +N
Sbjct: 77 NHQGRTPSCTHALINAGVKEVISTIPDPNPQVAGSGFRRLQEAGVKVRYGLMQSEAEALN 136
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G PW+R+K+A+S+D +T++ + +SQWITS ESR D WRA S AIL+
Sbjct: 137 PGFLKRMRTGFPWIRLKLAASIDGRTAMESGASQWITSLESRQDVQCWRAESDAILS 193
>gi|123443368|ref|YP_001007342.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|420257480|ref|ZP_14760238.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|122090329|emb|CAL13195.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|404515129|gb|EKA28906.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 369
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L +SPNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+K+V+ A+ DPNP V+G+G+ +L AG+ V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P++++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 185 RAQSSAILS 193
>gi|419954681|ref|ZP_14470817.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri TS44]
gi|387968545|gb|EIK52834.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri TS44]
Length = 368
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A + S+ PNPRVGCVIV ++ G+ G HAE+ AL A G
Sbjct: 9 MARALQLAHKGLYSTHPNPRVGCVIVAAGELVGEGWHVRAGEPHAEVHALRQA---GERA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EAL+++G+ +V+ A+ DPNP V+G+G+ L SAGI V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCAEALVRAGVGRVVAAMQDPNPQVAGRGLQLLRSAGIDVA 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R +
Sbjct: 126 SGVLEAEARELNGGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +LTG +
Sbjct: 186 RARSSVVLTGAD 197
>gi|21241517|ref|NP_641099.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. citri str.
306]
gi|21106864|gb|AAM35635.1| riboflavin-specific deaminase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 369
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+++V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIEVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+MQ +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WITS ++R D W
Sbjct: 133 SGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITSADARADVQRW 192
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 193 RARAGAILTG 202
>gi|332160725|ref|YP_004297302.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325664955|gb|ADZ41599.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 369
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L +SPNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+K+V+ A+ DPNP V+G+G+ +L AG+ V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P++++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 185 RAQSSAILS 193
>gi|289671055|ref|ZP_06492130.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 369
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI +G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIDAGVTRVVAAMADPFPQVNGGGFALLRDAGIEVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M +A +N GF SR++RG PWVR+K+ +SLD +T+L + S+WIT ++R D W
Sbjct: 133 SGVMHAQARTLNRGFLSRVERGWPWVRIKLGASLDGRTALASGQSKWITGADARADVQRW 192
Query: 180 RARSCAILTGKN 191
RAR+CAILTG
Sbjct: 193 RARACAILTGAG 204
>gi|380510433|ref|ZP_09853840.1| riboflavin biosynthesis protein RibD [Xanthomonas sacchari NCPPB
4393]
Length = 369
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ ++ G+ + GG HAE+ AL A G
Sbjct: 17 MAQALRLAERGAYTTRPNPMVGCVIVRDGAVVGEGFHQRAGGPHAEVFAL---RAAGERA 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++ + +V+ A+ DP P V+G G A L AGI+V+
Sbjct: 74 RGATAYVTLEPCAHYGRTPPCALALIEAEVARVVAAMADPFPQVNGGGFALLREAGIAVQ 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLMQ +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT +R D W
Sbjct: 134 SGLMQAQARALNRGFLSRVERGRPWLRIKLGASLDGRTALASGESKWITGAAARQDVQHW 193
Query: 180 RARSCAILTGKN 191
RAR+ AILTG
Sbjct: 194 RARAGAILTGAG 205
>gi|390949429|ref|YP_006413188.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thiocystis
violascens DSM 198]
gi|390425998|gb|AFL73063.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thiocystis
violascens DSM 198]
Length = 403
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 123/177 (69%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++ PNP VGCV+V++ + G+ + G HAE +AL A G +T Y+TLEPC
Sbjct: 31 SADPNPCVGCVLVRDGLPVGQGWHRRAGEPHAERNALAQA---GESARGATAYVTLEPCC 87
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPCT+ALI +G+ +V+ A+ DPNPLV+GKG+A L AGI VK G+++++A +N
Sbjct: 88 HHGRTPPCTDALIAAGVTRVVCAMADPNPLVAGKGIAMLREAGIEVKTGVLEEQARALNP 147
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM++G P+VR K+A+SLD +T++ + SQWI+S SR + +WRA S AILTG
Sbjct: 148 GFIKRMEQGRPFVRCKLAASLDGRTAMASGESQWISSTASRREVQLWRAASSAILTG 204
>gi|422923573|ref|ZP_16956720.1| riboflavin biosynthesis protein RibD [Vibrio cholerae BJG-01]
gi|341643862|gb|EGS68124.1| riboflavin biosynthesis protein RibD [Vibrio cholerae BJG-01]
Length = 367
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ GIP+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGIPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|289663675|ref|ZP_06485256.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 369
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI +G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIDAGVTRVVAAMADPFPQVNGGGFALLRDAGIEVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M +A +N GF SR++RG PWVR+K+ +SLD +T+L + S+WIT ++R D W
Sbjct: 133 SGVMHAQARTLNRGFLSRVERGWPWVRIKLGASLDGRTALASGQSKWITGADARADVQRW 192
Query: 180 RARSCAILTGKN 191
RAR+CAILTG
Sbjct: 193 RARACAILTGAG 204
>gi|300715569|ref|YP_003740372.1| riboflavin biosynthesis protein RibD [Erwinia billingiae Eb661]
gi|299061405|emb|CAX58515.1| Riboflavin biosynthesis protein RibD [Erwinia billingiae Eb661]
Length = 368
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ ++ GY G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVIVRDGVMVGEGYHFRAGEPHAEVHALRMA---GDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +VI A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 QGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVIAAMQDPNPEVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA +N GF RM+ G PWV++K+ +SLD +T++ N SQWITS E+R D
Sbjct: 124 HGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMANGESQWITSAEARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|88801234|ref|ZP_01116773.1| riboflavin biosynthesis protein [Reinekea blandensis MED297]
gi|88776020|gb|EAR07256.1| riboflavin biosynthesis protein [Reinekea sp. MED297]
Length = 366
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNP VGCVIV++ ++ GY + G HAE+ AL A G +T Y+TLEPCS
Sbjct: 25 TTTPNPNVGCVIVRDGELVGSGYHRKAGTPHAEVHALAEA---GSKARGATAYVTLEPCS 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC +ALIK+G+ V+ A+ DPNP V+G+G+ +L +AGI V G++ EA +N
Sbjct: 82 HYGKTPPCADALIKAGVANVVCAMTDPNPQVAGQGLEKLRNAGIEVISGVLNAEAERLNR 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM+ G PW+ K+A+SLD T+L N SQWIT E+R D RA SCA++TG
Sbjct: 142 GFLKRMRTGRPWLVAKMAASLDGGTALANGDSQWITGPEARQDVQSGRADSCAVVTG 198
>gi|312883784|ref|ZP_07743503.1| riboflavin-specific deaminase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368533|gb|EFP96066.1| riboflavin-specific deaminase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 365
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 131/189 (69%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+L ++PNPRVGCVIVK+ ++ G+ G HAE+ AL A +
Sbjct: 10 MSRALKLAELGKYTTAPNPRVGCVIVKDGLVVGEGFHYRAGEPHAEVHALQAAKERAI-- 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS++G TPPC EALIK+ + +V+ A+ DPN LVSG+G+ L SAGI V
Sbjct: 68 -GATVYVTLEPCSHYGRTPPCAEALIKAKVGRVVCAMQDPNTLVSGRGIQMLRSAGIEVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N F M+ G+P+V++K+A SLD +T+L N SQWITS ++R D +
Sbjct: 127 VGLLEQDALDLNRAFIKTMRSGLPFVQLKLAGSLDGQTALKNGQSQWITSSQARQDVQAF 186
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 187 RAQSGAILS 195
>gi|269469107|gb|EEZ80655.1| pyrimidine deaminase [uncultured SUP05 cluster bacterium]
Length = 350
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
Query: 17 NPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSYFGY 76
NP VGCVIVK+ +II+ GY ++ G H EI+AL Q + +T Y+TLEPCS+ G
Sbjct: 30 NPMVGCVIVKDDQIIAKGYHQTFGEAHGEINALKQIDHQAH---GATFYVTLEPCSHQGK 86
Query: 77 TPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIGFFS 136
TPPC +A+I SG KKVIIA+ DPNPLVSGKG+A L ++GI V GLM+ +A E+N GF
Sbjct: 87 TPPCAQAIIDSGAKKVIIALLDPNPLVSGKGMAMLENSGIEVITGLMENKALELNRGFVK 146
Query: 137 RMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
RMQ G+P+V KIA SLD KTS+ + S+WIT + +R D RA AI+TG
Sbjct: 147 RMQTGLPFVTCKIAMSLDGKTSMTSGESKWITGEPARQDVQKLRANHQAIITG 199
>gi|418515299|ref|ZP_13081480.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|410708018|gb|EKQ66467.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 369
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV++ + G+ + GG HAE+ AL A G +T Y+TLEPC+
Sbjct: 29 TTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELARGATAYVTLEPCA 85
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC ALI++G+++V+ A+ DP P V+G G A L AGI V G+MQ +A +N
Sbjct: 86 HYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIEVLSGVMQAQARTLNQ 145
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PW+R+K+ +SLD +T+L + S+WITS ++R D WRAR+ A+LTG
Sbjct: 146 GFLSRVERGRPWLRVKLGASLDGRTALASGESKWITSADARADVQRWRARAGAVLTGAG 204
>gi|262170762|ref|ZP_06038440.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio mimicus MB-451]
gi|261891838|gb|EEY37824.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio mimicus MB-451]
Length = 367
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 122/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G + +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTHGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+G+GV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|448240785|ref|YP_007404838.1| riboflavin biosynthesis protein RibD [Serratia marcescens WW4]
gi|445211149|gb|AGE16819.1| riboflavin biosynthesis protein RibD [Serratia marcescens WW4]
Length = 369
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALRMA---GDKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AG+ V+
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALVAAGVTRVVAAMQDPNPQVAGRGLYKLQQAGVEVR 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P+V++K+ +SLD +T++ + SQWITS E+R D
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPEARQDVQRL 184
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 185 RAQSAAILS 193
>gi|149187995|ref|ZP_01866290.1| pyrimidine reductase [Vibrio shilonii AK1]
gi|148837983|gb|EDL54925.1| pyrimidine reductase [Vibrio shilonii AK1]
Length = 369
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK ++PNP VGCVI ++ GY K G HAE+ AL AA +
Sbjct: 12 MSRALELAKRGRFTTAPNPNVGCVITLNNEVVGEGYHKKAGEPHAEVHALRMAAERAK-- 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+G+ KVI A++DPNP V+G+G L AGI V
Sbjct: 70 -GATAYVTLEPCSHYGRTPPCAEGLIKAGVSKVICAMSDPNPQVAGRGFNMLREAGIEVS 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N GF +M+ G+P+V++K+A+SLD +T+L N SQWIT E+R D +
Sbjct: 129 VGLLEQDARALNPGFLKKMETGMPFVQLKMAASLDGQTALANGISQWITGPEARRDVQAY 188
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 189 RAQSGAILS 197
>gi|333906668|ref|YP_004480254.1| riboflavin biosynthesis protein RibD [Marinomonas posidonica
IVIA-Po-181]
gi|333476674|gb|AEF53335.1| riboflavin biosynthesis protein RibD [Marinomonas posidonica
IVIA-Po-181]
Length = 381
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + + PNPRVGCV+VK+ +I GY + G HAE++AL +A DV
Sbjct: 9 MAKALQLAQKGLFTTHPNPRVGCVLVKQDELIGQGYHEKAGEGHAEVNALADAK---QDV 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALIK+G+ V+ + DPNP V+G G+A+L +AGI V
Sbjct: 66 SGATAYVTLEPCSHQGKTPPCADALIKAGVACVVYGLQDPNPEVAGNGLAKLKAAGIEVI 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+++ E +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT ++R D W
Sbjct: 126 GPILEAECNALNPGFNKRMREGLPFVRVKLAMSLDGRTAMESGESQWITGGDARLDVQKW 185
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 186 RAQSDAIVTG 195
>gi|253687420|ref|YP_003016610.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753998|gb|ACT12074.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 378
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 17 MARALELARRGRFTTAPNPNVGCVIVRDGDIVGEGYHFRAGEPHAEVHALRMA---GERA 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 74 RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAVS 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G M EA ++N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 134 HGFMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 193
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 194 RAESAAILS 202
>gi|254286058|ref|ZP_04961019.1| riboflavin biosynthesis protein RibD [Vibrio cholerae AM-19226]
gi|150423968|gb|EDN15908.1| riboflavin biosynthesis protein RibD [Vibrio cholerae AM-19226]
Length = 367
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 122/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G + +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTHGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+G+GV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|126666704|ref|ZP_01737681.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Marinobacter sp. ELB17]
gi|126628749|gb|EAZ99369.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Marinobacter sp. ELB17]
Length = 371
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A + ++ PNPRVGCVI + RI+ + + G HAE+ AL A G
Sbjct: 10 MARAVQLAWRGRYSTHPNPRVGCVIARGDRILGESWHERAGEAHAEVRALSQA---GTSA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST Y+TLEPCS+FG TPPC +ALI++G+ +V A DPNP VSG+G+ L +AGI V
Sbjct: 67 RGSTAYVTLEPCSHFGRTPPCAKALIEAGVARVFAATLDPNPNVSGRGLEMLRAAGIRVH 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA ++N GF RM G PWVR+K+A+SLD +T++ + SQWIT ESR+D
Sbjct: 127 VGLLAGEAAKLNPGFMKRMTSGRPWVRLKMAASLDGRTAMASGESQWITGPESRSDVQRL 186
Query: 180 RARSCAILTG 189
RA S AILTG
Sbjct: 187 RAMSDAILTG 196
>gi|22124907|ref|NP_668330.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis KIM10+]
gi|45440597|ref|NP_992136.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis biovar Microtus str. 91001]
gi|51595284|ref|YP_069475.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pseudotuberculosis IP 32953]
gi|108808668|ref|YP_652584.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis Antiqua]
gi|108811070|ref|YP_646837.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis Nepal516]
gi|145600077|ref|YP_001164153.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis Pestoides F]
gi|149364971|ref|ZP_01887006.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis CA88-4125]
gi|162418167|ref|YP_001607523.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis Angola]
gi|165926574|ref|ZP_02222406.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165935961|ref|ZP_02224531.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011096|ref|ZP_02231994.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213091|ref|ZP_02239126.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167398606|ref|ZP_02304130.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421644|ref|ZP_02313397.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423702|ref|ZP_02315455.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470057|ref|ZP_02334761.1| riboflavin biosynthesis protein RibD [Yersinia pestis FV-1]
gi|170025475|ref|YP_001721980.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pseudotuberculosis YPIII]
gi|186894301|ref|YP_001871413.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pseudotuberculosis PB1/+]
gi|218930213|ref|YP_002348088.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis CO92]
gi|229838788|ref|ZP_04458947.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896058|ref|ZP_04511228.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis Pestoides A]
gi|229899356|ref|ZP_04514499.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis biovar Orientalis str. India
195]
gi|229901297|ref|ZP_04516419.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis Nepal516]
gi|270489486|ref|ZP_06206560.1| riboflavin biosynthesis protein RibD [Yersinia pestis KIM D27]
gi|294504911|ref|YP_003568973.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase oxidoreductase [Yersinia pestis Z176003]
gi|384123381|ref|YP_005506001.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase oxidoreductase [Yersinia pestis D106004]
gi|384127233|ref|YP_005509847.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase oxidoreductase [Yersinia pestis D182038]
gi|384138974|ref|YP_005521676.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis A1122]
gi|420564585|ref|ZP_15060554.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-04]
gi|420569636|ref|ZP_15065139.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-05]
gi|420575290|ref|ZP_15070257.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-06]
gi|420580606|ref|ZP_15075089.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-07]
gi|420585960|ref|ZP_15079939.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-08]
gi|420591072|ref|ZP_15084536.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-09]
gi|420596456|ref|ZP_15089379.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-10]
gi|420602130|ref|ZP_15094427.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-11]
gi|420607554|ref|ZP_15099329.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-12]
gi|420612938|ref|ZP_15104160.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-13]
gi|420618323|ref|ZP_15108855.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-14]
gi|420623622|ref|ZP_15113628.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-15]
gi|420628695|ref|ZP_15118230.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-16]
gi|420633831|ref|ZP_15122831.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-19]
gi|420639027|ref|ZP_15127514.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-25]
gi|420644499|ref|ZP_15132502.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-29]
gi|420655424|ref|ZP_15142349.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-34]
gi|420660931|ref|ZP_15147279.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-36]
gi|420666218|ref|ZP_15152035.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-42]
gi|420671085|ref|ZP_15156471.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-45]
gi|420676432|ref|ZP_15161331.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-46]
gi|420682053|ref|ZP_15166410.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-47]
gi|420687388|ref|ZP_15171149.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-48]
gi|420698367|ref|ZP_15180801.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-53]
gi|420704194|ref|ZP_15185437.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-54]
gi|420709562|ref|ZP_15190197.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-55]
gi|420715020|ref|ZP_15195050.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-56]
gi|420720533|ref|ZP_15199779.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-58]
gi|420726007|ref|ZP_15204594.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-59]
gi|420731589|ref|ZP_15209611.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-60]
gi|420736611|ref|ZP_15214147.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-61]
gi|420742086|ref|ZP_15219067.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-63]
gi|420747806|ref|ZP_15223904.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-64]
gi|420753242|ref|ZP_15228756.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-65]
gi|420759025|ref|ZP_15233414.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-66]
gi|420764295|ref|ZP_15238036.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-71]
gi|420769520|ref|ZP_15242724.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-72]
gi|420774500|ref|ZP_15247234.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-76]
gi|420780117|ref|ZP_15252177.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-88]
gi|420785716|ref|ZP_15257071.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-89]
gi|420790859|ref|ZP_15261691.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-90]
gi|420796382|ref|ZP_15266656.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-91]
gi|420806795|ref|ZP_15276051.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-93]
gi|420817666|ref|ZP_15285844.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-95]
gi|420822981|ref|ZP_15290612.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-96]
gi|420828062|ref|ZP_15295179.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-98]
gi|420833749|ref|ZP_15300318.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-99]
gi|420838616|ref|ZP_15304714.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-100]
gi|420843807|ref|ZP_15309425.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-101]
gi|420849464|ref|ZP_15314507.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-102]
gi|420855134|ref|ZP_15319309.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-103]
gi|420860324|ref|ZP_15323879.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-113]
gi|421764686|ref|ZP_16201474.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis INS]
gi|21957743|gb|AAM84581.1|AE013703_11 bifunctional pyrimidine deaminase/reductase [Yersinia pestis
KIM10+]
gi|45435454|gb|AAS61013.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia pestis biovar Microtus str. 91001]
gi|51588566|emb|CAH20174.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Yersinia pseudotuberculosis IP
32953]
gi|108774718|gb|ABG17237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Yersinia pestis Nepal516]
gi|108780581|gb|ABG14639.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia pestis Antiqua]
gi|115348824|emb|CAL21778.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia pestis CO92]
gi|145211773|gb|ABP41180.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia pestis Pestoides F]
gi|149291384|gb|EDM41458.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis CA88-4125]
gi|162350982|gb|ABX84930.1| riboflavin biosynthesis protein RibD [Yersinia pestis Angola]
gi|165916106|gb|EDR34713.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921502|gb|EDR38699.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990096|gb|EDR42397.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205878|gb|EDR50358.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166960563|gb|EDR56584.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051110|gb|EDR62518.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167057872|gb|EDR67618.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169752009|gb|ACA69527.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
YPIII]
gi|186697327|gb|ACC87956.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
PB1/+]
gi|229681226|gb|EEO77320.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis Nepal516]
gi|229687758|gb|EEO79831.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis biovar Orientalis str. India
195]
gi|229695154|gb|EEO85201.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700981|gb|EEO89010.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis Pestoides A]
gi|262362977|gb|ACY59698.1| riboflavin biosynthesis protein RibD (includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Yersinia pestis D106004]
gi|262366897|gb|ACY63454.1| riboflavin biosynthesis protein RibD (includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Yersinia pestis D182038]
gi|270337990|gb|EFA48767.1| riboflavin biosynthesis protein RibD [Yersinia pestis KIM D27]
gi|294355370|gb|ADE65711.1| riboflavin biosynthesis protein RibD (includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Yersinia pestis Z176003]
gi|342854103|gb|AEL72656.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis A1122]
gi|391438360|gb|EIQ99115.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-04]
gi|391439489|gb|EIR00139.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-05]
gi|391443287|gb|EIR03615.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-06]
gi|391455296|gb|EIR14425.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-07]
gi|391456163|gb|EIR15215.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-08]
gi|391458084|gb|EIR16973.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-09]
gi|391471088|gb|EIR28679.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-10]
gi|391472496|gb|EIR29952.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-11]
gi|391473456|gb|EIR30834.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-12]
gi|391487239|gb|EIR43196.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-13]
gi|391488714|gb|EIR44529.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-15]
gi|391489061|gb|EIR44843.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-14]
gi|391503123|gb|EIR57343.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-16]
gi|391503345|gb|EIR57549.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-19]
gi|391508558|gb|EIR62281.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-25]
gi|391519125|gb|EIR71782.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-29]
gi|391520792|gb|EIR73316.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-34]
gi|391533687|gb|EIR84941.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-36]
gi|391536685|gb|EIR87646.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-42]
gi|391539098|gb|EIR89844.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-45]
gi|391552078|gb|EIS01532.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-46]
gi|391552358|gb|EIS01789.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-47]
gi|391552801|gb|EIS02192.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-48]
gi|391568125|gb|EIS15893.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-53]
gi|391572798|gb|EIS19978.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-54]
gi|391581399|gb|EIS27289.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-55]
gi|391583628|gb|EIS29266.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-56]
gi|391594079|gb|EIS38282.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-58]
gi|391597041|gb|EIS40899.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-60]
gi|391598238|gb|EIS41982.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-59]
gi|391611494|gb|EIS53665.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-61]
gi|391612033|gb|EIS54149.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-63]
gi|391614974|gb|EIS56789.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-64]
gi|391624624|gb|EIS65234.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-65]
gi|391629344|gb|EIS69290.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-66]
gi|391635350|gb|EIS74523.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-71]
gi|391637381|gb|EIS76308.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-72]
gi|391647340|gb|EIS84977.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-76]
gi|391650939|gb|EIS88172.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-88]
gi|391655462|gb|EIS92203.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-89]
gi|391660249|gb|EIS96428.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-90]
gi|391667840|gb|EIT03125.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-91]
gi|391677328|gb|EIT11641.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-93]
gi|391691276|gb|EIT24216.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-95]
gi|391694241|gb|EIT26920.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-96]
gi|391695928|gb|EIT28462.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-98]
gi|391708077|gb|EIT39363.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-99]
gi|391711525|gb|EIT42482.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-100]
gi|391712396|gb|EIT43281.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-101]
gi|391724239|gb|EIT53835.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-102]
gi|391724981|gb|EIT54494.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-103]
gi|391727589|gb|EIT56783.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-113]
gi|411174237|gb|EKS44270.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis INS]
Length = 369
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L +SPNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESSAILS 193
>gi|302189350|ref|ZP_07266023.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
syringae 642]
Length = 378
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARAIELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ E+ +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESESRALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 190 RAQSSVVLSGAD 201
>gi|385872836|gb|AFI91356.1| Riboflavin biosynthesis protein RibD [Pectobacterium sp. SCC3193]
Length = 388
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 27 MARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMA---GERA 83
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L +GI+V
Sbjct: 84 RGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLHRLQQSGITVS 143
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M EA ++N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 144 HGVMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 203
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 204 RAESAAILS 212
>gi|88859176|ref|ZP_01133817.1| Riboflavin biosynthesis protein [Pseudoalteromonas tunicata D2]
gi|88819402|gb|EAR29216.1| Riboflavin biosynthesis protein [Pseudoalteromonas tunicata D2]
Length = 373
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ AK +SPNP VGCV+VK+ +I+ GY + G HAE+ AL A Q
Sbjct: 11 MALAIELAKKGRYTTSPNPNVGCVLVKDGQIVGQGYHQKAGEGHAEVHALAQAKEQAL-- 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC AL+ +G+ KVI A+ DPNP VSG+G+A L AGI
Sbjct: 69 -GATAYVTLEPCSHTGRTGPCALALVNAGVIKVIAAMVDPNPAVSGRGLAILEKAGIQTA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLMQ EA +N+GF RM+ +P+V+ K+A+SLD KT+L N S+WIT +R +
Sbjct: 128 HGLMQVEAEALNVGFLKRMRNAMPFVQCKLAASLDGKTALANGLSKWITGPLARAQVQDY 187
Query: 180 RARSCAILTGKN 191
RA+SCA+LTG +
Sbjct: 188 RAQSCAVLTGAD 199
>gi|392546200|ref|ZP_10293337.1| riboflavin biosynthesis protein [Pseudoalteromonas rubra ATCC
29570]
Length = 372
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 5/186 (2%)
Query: 6 QQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVY 65
QQ + + ++PNP VGCVIV I+ G+ G HAE+ AL A A+ +T Y
Sbjct: 19 QQGRFT--TTPNPNVGCVIVNNGEIVGEGFHLRAGEPHAEVHALREAKARAR---GATAY 73
Query: 66 ITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQK 125
+TLEPCS++G TPPC + LI++G+ KVI A+ DPNP V+G+G+A L AGI GL+++
Sbjct: 74 VTLEPCSHYGRTPPCAKGLIEAGVSKVIAAMVDPNPEVAGRGLAMLNEAGIETASGLLEQ 133
Query: 126 EAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCA 185
+A +N GF RM+ G+P+V K+A+SLD KT+L N S+WIT + +R D + RA+SCA
Sbjct: 134 QARALNKGFLKRMEHGLPFVICKLAASLDGKTALGNGESKWITGEAARRDVQLGRAQSCA 193
Query: 186 ILTGKN 191
ILTG +
Sbjct: 194 ILTGAD 199
>gi|338731395|ref|YP_004660787.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thermotoga
thermarum DSM 5069]
gi|335365746|gb|AEH51691.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Thermotoga thermarum DSM 5069]
Length = 367
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDAL--LNAAAQGY 57
M+LAL+ AK +SPNP VG VIVK+ +I++ GY K G HAEI+AL LN AQ
Sbjct: 7 MSLALKLAKKGKYTTSPNPMVGAVIVKDGKILATGYHKKAGQPHAEINALSKLNFQAQ-- 64
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
N +Y+TLEPCS++G TPPC +A+I+SGI+KV+IA DPNPLV+GKGV +L +AGI
Sbjct: 65 ---NCEMYVTLEPCSHYGRTPPCADAIIRSGIRKVVIATLDPNPLVNGKGVEKLKNAGIE 121
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V G+++++A ++N FF + IP+V +KIA +LD K +L N S+WITS++SR H
Sbjct: 122 VVCGVLEEKAKKLNEKFFKYITTKIPFVALKIAQTLDGKIALKNGESKWITSEKSREYVH 181
Query: 178 IWRARSCAILTG 189
R A+LTG
Sbjct: 182 KLRMEYDAVLTG 193
>gi|153947163|ref|YP_001402077.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pseudotuberculosis IP 31758]
gi|152958658|gb|ABS46119.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
IP 31758]
Length = 369
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L +SPNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESSAILS 193
>gi|261822528|ref|YP_003260634.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pectobacterium wasabiae WPP163]
gi|261606541|gb|ACX89027.1| riboflavin biosynthesis protein RibD [Pectobacterium wasabiae
WPP163]
Length = 369
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 8 MARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMA---GERA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L +GI+V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLHRLQQSGITVS 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M EA ++N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGVMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESAAILS 193
>gi|153803015|ref|ZP_01957601.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-3]
gi|124121458|gb|EAY40201.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-3]
Length = 367
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPFVQLKMAASLDGQTALANGQSQWITSPAARKDVQRFRAQASAILS 197
>gi|354598786|ref|ZP_09016803.1| riboflavin biosynthesis protein RibD [Brenneria sp. EniD312]
gi|353676721|gb|EHD22754.1| riboflavin biosynthesis protein RibD [Brenneria sp. EniD312]
Length = 383
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ ++ GY G HAE+ AL A G
Sbjct: 17 MARALELARRGRFTTAPNPNVGCVIVRDGEVVGEGYHFRAGEPHAEVHALRMA---GERA 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL +G+ +V++A+ DPNP V+G+G+ +L AGI+V
Sbjct: 74 RGATAYVTLEPCSHHGRTPPCADALAAAGVSRVVVAMQDPNPQVAGRGLHRLQQAGIAVS 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 134 HGLMTAEAEKLNRGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSAQARQDVQRF 193
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 194 RAQSAAILS 202
>gi|157374412|ref|YP_001473012.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella
sediminis HAW-EB3]
gi|157316786|gb|ABV35884.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella
sediminis HAW-EB3]
Length = 374
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ A+ + + PNP VG V+ K ++I G+ GG HAE+ AL A+ +
Sbjct: 10 MSRAIKLARKGLYTTRPNPCVGSVVTKAGQVIGEGFHIRAGGPHAEVYALAMASD---NA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALIK+G+ +V++AI DPNP VSG+G+ L AGI V
Sbjct: 67 KGATAYVTLEPCSHHGRTPPCAEALIKAGVARVVVAIEDPNPQVSGRGIKMLTDAGIQVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA +IN GF RMQ G+P + +K+ASSLD KT+L N S+WIT E+R D
Sbjct: 127 VGLLNVEAGDINPGFMKRMQSGLPKITVKLASSLDGKTALNNGVSKWITGSEARRDVQRL 186
Query: 180 RARSCAILTG 189
RAR CA++TG
Sbjct: 187 RARHCALVTG 196
>gi|262190240|ref|ZP_06048514.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae CT 5369-93]
gi|262033885|gb|EEY52351.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae CT 5369-93]
Length = 365
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 22 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 79 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 139 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 195
>gi|419837977|ref|ZP_14361415.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-46B1]
gi|421354969|ref|ZP_15805301.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-45]
gi|423735934|ref|ZP_17709126.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-41B1]
gi|424010272|ref|ZP_17753206.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-44C1]
gi|395954094|gb|EJH64707.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-45]
gi|408629360|gb|EKL02059.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-41B1]
gi|408856525|gb|EKL96220.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-46B1]
gi|408863302|gb|EKM02792.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-44C1]
Length = 365
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 22 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 79 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 139 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 195
>gi|15605717|ref|NP_213094.1| riboflavin specific deaminase [Aquifex aeolicus VF5]
gi|6225948|sp|O66534.1|RIBD_AQUAE RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName:
Full=Diaminohydroxyphosphoribosylaminopyrimidine
deaminase; Short=DRAP deaminase; AltName:
Full=Riboflavin-specific deaminase; Includes: RecName:
Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
AltName: Full=HTP reductase
gi|2982867|gb|AAC06487.1| riboflavin specific deaminase [Aquifex aeolicus VF5]
Length = 356
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK + PNP VG V+VKE +I+ GY + G HAE+ AL A G
Sbjct: 10 MKLALSLAKKRKGYTHPNPTVGAVVVKEGKIVGLGYHEKAGKPHAEVMALGQA---GEKA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPC++FG TPPCT+A+I+SGIK+V++A DPNPL+SGKGV +L +AGI V
Sbjct: 67 KGATLYVTLEPCTHFGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVEKLRNAGIEVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++EA E+N FF+ + + P++ +K A +LD K + SS+WITSKESR +HI
Sbjct: 127 VGVCEEEARELNEDFFTYITQERPYITLKWAQTLDGKLATLTGSSKWITSKESRKVAHIL 186
Query: 180 RARSCAILTGKN 191
R + A+L G N
Sbjct: 187 RREATAVLVGVN 198
>gi|297580914|ref|ZP_06942839.1| riboflavin biosynthesis protein RibD [Vibrio cholerae RC385]
gi|297534740|gb|EFH73576.1| riboflavin biosynthesis protein RibD [Vibrio cholerae RC385]
Length = 367
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|421344015|ref|ZP_15794418.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-43B1]
gi|395940095|gb|EJH50776.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-43B1]
Length = 367
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|120553775|ref|YP_958126.1| riboflavin biosynthesis protein RibD [Marinobacter aquaeolei VT8]
gi|120323624|gb|ABM17939.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Marinobacter aquaeolei VT8]
Length = 363
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A + ++ PNPRVGCVI K I+ G+ + G HAE+ AL A G++
Sbjct: 2 MARAVQLAWRGRYSTHPNPRVGCVIAKGDLIVGEGWHERAGEAHAEVRALSQA---GHEA 58
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI +G+ V A DPNP VSG+G+ L AGI V
Sbjct: 59 RGATAYVTLEPCSHYGRTPPCARALIDAGVAHVFAATKDPNPSVSGRGLDMLREAGIRVT 118
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G+M EA +N GF RM G PWVR+K+A+SLD +T++ + SQWIT E+R D
Sbjct: 119 EGVMADEAARLNPGFMKRMNTGRPWVRLKMAASLDGRTAMASGESQWITGPEARADVQRL 178
Query: 180 RARSCAILTG 189
RA S AILTG
Sbjct: 179 RAISDAILTG 188
>gi|71276434|ref|ZP_00652710.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Xylella fastidiosa Dixon]
gi|170730982|ref|YP_001776415.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase,
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Xylella fastidiosa M12]
gi|71162750|gb|EAO12476.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Xylella fastidiosa Dixon]
gi|167965775|gb|ACA12785.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase,
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Xylella fastidiosa M12]
Length = 364
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV + ++ G+ + G HAE+ AL A G +T Y+TLEPC+
Sbjct: 25 TTRPNPMVGCVIVHDGEVVGEGWHQRAGDPHAEVFAL---RAAGDCARGATAYVTLEPCA 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC ALI +G+++V+ A+ DP PLV+G GV L +AG++V+ GLM+ +A +N
Sbjct: 82 HSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGVTLLRAAGVTVEHGLMEAQARALNR 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PWVR+K+ SSLD +T+L + S+WIT + +R D WRAR+ AILTG
Sbjct: 142 GFLSRVERGRPWVRIKLGSSLDGRTALASGESKWITGEAARADVQRWRARASAILTGAG 200
>gi|257455158|ref|ZP_05620396.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus
SK60]
gi|257447491|gb|EEV22496.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus
SK60]
Length = 359
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQ-GYD 58
M+ A++ AK + PNP VGCVIVK+ +II G+ G HAE+ AL A +
Sbjct: 17 MSRAIELAKKGRFTTRPNPSVGCVIVKDNQIIGEGFHYQAGQPHAEVFALRQAYERDAKH 76
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+ + Y+TLEPCS+ G TPPC +ALI++GI +V+IA+ DPNP V G G+A+L AGI V
Sbjct: 77 LQGAIAYVTLEPCSHHGRTPPCADALIQAGISRVVIAVVDPNPKVDGGGIAKLQQAGIEV 136
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
G+ ++ AY++N GFF M+ G+P+VR+KIA+SLD +T++ N S+WITS +SR D
Sbjct: 137 ITGICEQAAYQLNEGFFKVMRGGLPFVRLKIATSLDGRTAMANGESKWITSDQSREDVQR 196
Query: 179 WRARSCAILTG 189
RA++ AI+TG
Sbjct: 197 LRAQAGAIITG 207
>gi|417825504|ref|ZP_12472092.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE48]
gi|423823010|ref|ZP_17717020.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55C2]
gi|423856975|ref|ZP_17720827.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-59A1]
gi|423957576|ref|ZP_17735319.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-40]
gi|424017430|ref|ZP_17757259.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55B2]
gi|424020355|ref|ZP_17760138.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-59B1]
gi|424641246|ref|ZP_18079129.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-56A1]
gi|424649314|ref|ZP_18086977.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-57A1]
gi|340046989|gb|EGR07919.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE48]
gi|408022731|gb|EKG59926.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-56A1]
gi|408032030|gb|EKG68629.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-57A1]
gi|408634986|gb|EKL07221.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55C2]
gi|408640322|gb|EKL12118.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-59A1]
gi|408656514|gb|EKL27608.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-40]
gi|408859612|gb|EKL99269.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55B2]
gi|408866932|gb|EKM06303.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-59B1]
Length = 365
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 22 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 79 SHYGRTPPCAEGLIKAGVSKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 139 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 195
>gi|56460970|ref|YP_156251.1| riboflavin-specific deaminase/reductase [Idiomarina loihiensis
L2TR]
gi|56179980|gb|AAV82702.1| Riboflavin-specific deaminase/reductase [Idiomarina loihiensis
L2TR]
Length = 375
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + + PNP VGCVI ++ G+ G HAE+ AL A G V
Sbjct: 14 MHRALMLARRGLMTTRPNPAVGCVITLGTEVVGEGWHHQAGEPHAEVHAL---RAAGQKV 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+K+V++A+ DPNP VSG G+ +L +AGISV
Sbjct: 71 RGATAYVTLEPCSHIGRTPPCCDALIEAGVKRVVVAMQDPNPRVSGNGIQRLKAAGISVD 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++Q A +N GF SRM R PWV +K+A+SLD KT+L + SQWITS +SR+D +
Sbjct: 131 VGVLQLAAESLNPGFISRMTRQRPWVTLKMATSLDAKTALSDGRSQWITSSDSRSDVQFF 190
Query: 180 RARSCAILTG 189
RA++ AIL+G
Sbjct: 191 RAQADAILSG 200
>gi|417821601|ref|ZP_12468215.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE39]
gi|419830719|ref|ZP_14354204.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-1A2]
gi|419834402|ref|ZP_14357857.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-61A2]
gi|422918108|ref|ZP_16952426.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-02A1]
gi|423883603|ref|ZP_17724414.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-60A1]
gi|423985556|ref|ZP_17738870.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-46]
gi|423998533|ref|ZP_17741785.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-02C1]
gi|424625729|ref|ZP_18064190.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-50A1]
gi|424630217|ref|ZP_18068501.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-51A1]
gi|424634261|ref|ZP_18072361.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-52A1]
gi|424637338|ref|ZP_18075346.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55A1]
gi|443528231|ref|ZP_21094275.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-78A1]
gi|340039232|gb|EGR00207.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE39]
gi|341636990|gb|EGS61684.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-02A1]
gi|408011670|gb|EKG49477.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-50A1]
gi|408017624|gb|EKG55115.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-52A1]
gi|408023126|gb|EKG60306.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55A1]
gi|408054185|gb|EKG89171.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-51A1]
gi|408620492|gb|EKK93504.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-1A2]
gi|408640669|gb|EKL12457.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-60A1]
gi|408649224|gb|EKL20541.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-61A2]
gi|408663673|gb|EKL34535.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-46]
gi|408852432|gb|EKL92260.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-02C1]
gi|443453489|gb|ELT17312.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-78A1]
Length = 367
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVSKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|400405004|ref|YP_006587863.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [secondary
endosymbiont of Ctenarytaina eucalypti]
gi|400363367|gb|AFP84435.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [secondary
endosymbiont of Ctenarytaina eucalypti]
Length = 375
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
N++PNP VGCVIV + RI+ GY + G HAE+ AL A G +TVY++LEPC
Sbjct: 20 FNTAPNPNVGCVIVLDGRIVGEGYHQRAGEAHAEVYALHMA---GETARGATVYVSLEPC 76
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G T PC +ALI +G+ +V+ A+ DPNP V+G+G +L +AGI V+ LM EA +N
Sbjct: 77 SHHGRTRPCVDALIDAGVVRVVAAMLDPNPKVAGRGFCRLKNAGIEVRHSLMLSEAEAVN 136
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+PW+R+K+A+SLD +T++ + S+WITS E+R D WRA S AIL+
Sbjct: 137 PGFLKRMRTGLPWIRLKLAASLDGRTAMASGESKWITSPEARQDVQRWRAESDAILS 193
>gi|153826812|ref|ZP_01979479.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-2]
gi|149739399|gb|EDM53641.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-2]
Length = 367
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|429885228|ref|ZP_19366825.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae PS15]
gi|429228024|gb|EKY33976.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae PS15]
Length = 365
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 22 FTTSPNPNVGCVITRGEKIVGEGFHFRVGEPHAEVHAMRQA---GELTRGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 79 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 139 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 195
>gi|387813146|ref|YP_005428627.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338157|emb|CCG94204.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 371
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A + ++ PNPRVGCVI K I+ G+ + G HAE+ AL A G++
Sbjct: 10 MARAVQLAWRGRYSTHPNPRVGCVIAKGDLIVGEGWHERAGEAHAEVRALSQA---GHEA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC ALI +G+ V A DPNP VSG+G+ L AGI V
Sbjct: 67 RGATAYVTLEPCSHYGRTPPCARALIDAGVAHVFAATKDPNPSVSGRGLDMLREAGIRVT 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G+M EA +N GF RM G PWVR+K+A+SLD +T++ + SQWIT E+R D
Sbjct: 127 EGVMADEASRLNPGFMKRMNTGRPWVRLKMAASLDGRTAMASGESQWITGPEARADVQRL 186
Query: 180 RARSCAILTG 189
RA S AILTG
Sbjct: 187 RAISDAILTG 196
>gi|424660773|ref|ZP_18098020.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-16]
gi|408050146|gb|EKG85319.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-16]
Length = 367
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|153828188|ref|ZP_01980855.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 623-39]
gi|229522216|ref|ZP_04411633.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae TM 11079-80]
gi|148876277|gb|EDL74412.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 623-39]
gi|229341141|gb|EEO06146.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae TM 11079-80]
Length = 367
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|84394363|ref|ZP_00993084.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio splendidus
12B01]
gi|84375022|gb|EAP91948.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio splendidus
12B01]
Length = 364
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 131/190 (68%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M+ A+Q AK I ++PNP VGCVIV+ + +I+ G+ G HAE+ A+ A G
Sbjct: 2 MSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMA---GDK 58
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI V
Sbjct: 59 AKGATAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDAGIEV 118
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ GL++++A ++N F RMQ G+P+V++K+A+SLD +T+L N SQWITS E+R D
Sbjct: 119 EIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSPEARRDVQN 178
Query: 179 WRARSCAILT 188
+RA+S A+L+
Sbjct: 179 YRAKSGAVLS 188
>gi|53804252|ref|YP_114101.1| riboflavin biosynthesis protein RibD [Methylococcus capsulatus str.
Bath]
gi|53758013|gb|AAU92304.1| riboflavin biosynthesis protein RibD [Methylococcus capsulatus str.
Bath]
Length = 378
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVG V+V+ ++ G+ + GG HAEI AL +A +
Sbjct: 22 MAHALRLAEKGMYTTDPNPRVGSVVVQGNEVVGAGWHQRAGGPHAEIAALRDARGR---A 78
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 79 AGATVYVTLEPCSHHGRTPPCADALIEAGVHRVVAAMQDPNPRVAGQGLERLRRAGIEVS 138
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ +EA +N GF RM+ G+P+VR K+A SLD +T+L + S+WIT +R D H
Sbjct: 139 CGLLAREAERLNQGFVKRMRLGLPFVRSKLAMSLDGRTALASGDSKWITGDAARRDVHRL 198
Query: 180 RARSCAILTG 189
RARS I+TG
Sbjct: 199 RARSSVIVTG 208
>gi|34496745|ref|NP_900960.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Chromobacterium violaceum ATCC 12472]
gi|34102600|gb|AAQ58965.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Chromobacterium violaceum ATCC 12472]
Length = 368
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 117/179 (65%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNP VGCV+V R++ G T + G +HAE+ A+ + A+G +T Y+TLEPCS
Sbjct: 25 RAAPNPGVGCVLVNHGRVVGEGATLALGSDHAEVQAIKDCLARGESPRGATAYVTLEPCS 84
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC E L+K G+ +V+ A+ DP VSG+G+A L +AG+ GLM+ +A +
Sbjct: 85 HHGRTPPCAERLVKEGVARVVAAMVDPYHEVSGRGIAMLRAAGVEASAGLMEAQARRAHR 144
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PWV +K A++LD KT+L N S+WIT E+R D RA CAILTG
Sbjct: 145 GFLSRVERGRPWVTLKAAATLDGKTALLNGRSKWITGPEARMDVQRLRAAHCAILTGSG 203
>gi|294667125|ref|ZP_06732350.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292603135|gb|EFF46561.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 369
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGACVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIEAGVMRVVAAMADPFPQVNGGGFALLREAGIDVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+MQ +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WITS ++R D W
Sbjct: 133 SGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITSADARADVQRW 192
Query: 180 RARSCAILTGKN 191
RAR+ AILTG
Sbjct: 193 RARAGAILTGAG 204
>gi|229528728|ref|ZP_04418118.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae 12129(1)]
gi|229332502|gb|EEN97988.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae 12129(1)]
Length = 367
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|422911108|ref|ZP_16945736.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-09]
gi|341632480|gb|EGS57346.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-09]
Length = 367
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ AA +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAAEL---TRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|422308210|ref|ZP_16395363.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1035(8)]
gi|408618075|gb|EKK91164.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1035(8)]
Length = 365
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 22 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 79 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 139 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 195
>gi|86147437|ref|ZP_01065749.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio sp. MED222]
gi|85834730|gb|EAQ52876.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio sp. MED222]
Length = 364
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 131/190 (68%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M+ A+Q AK I ++PNP VGCVIV+ + +I+ G+ G HAE+ A+ A G
Sbjct: 2 MSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMA---GDK 58
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI V
Sbjct: 59 AKGATAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDAGIDV 118
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ GL++++A ++N F RMQ G+P+V++K+A+SLD +T+L N SQWITS E+R D
Sbjct: 119 EIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSPEARRDVQN 178
Query: 179 WRARSCAILT 188
+RA+S A+L+
Sbjct: 179 YRAKSGAVLS 188
>gi|410091956|ref|ZP_11288500.1| riboflavin biosynthesis protein RibD [Pseudomonas viridiflava
UASWS0038]
gi|409760699|gb|EKN45823.1| riboflavin biosynthesis protein RibD [Pseudomonas viridiflava
UASWS0038]
Length = 378
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E +I+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGQIVGEGWHALAGEPHAEVHALRQA---GEQA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ ++ DPNP V+G+G+ +L++AGI+V+
Sbjct: 70 RGATAYVTLEPCSHHGRTPPCADALVNAGVTRVVASMQDPNPEVAGRGLLRLMTAGIAVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLEAEARALNKGFIKRMETGQPYVRVKLAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|229524273|ref|ZP_04413678.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae bv. albensis VL426]
gi|229337854|gb|EEO02871.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae bv. albensis VL426]
Length = 367
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ AA +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAAEL---TRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|294627697|ref|ZP_06706279.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292598049|gb|EFF42204.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 369
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIEAGVMRVVAAMADPFPQVNGGGFALLREAGIDVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+MQ +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WITS ++R D W
Sbjct: 133 SGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITSADARADVQRW 192
Query: 180 RARSCAILTGKN 191
RAR+ AILTG
Sbjct: 193 RARAGAILTGAG 204
>gi|288941493|ref|YP_003443733.1| riboflavin biosynthesis protein RibD [Allochromatium vinosum DSM
180]
gi|288896865|gb|ADC62701.1| riboflavin biosynthesis protein RibD [Allochromatium vinosum DSM
180]
Length = 381
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNPRVGCV+V++ +++ G+ + G HAE AL A + D +TVY+TLEPCS
Sbjct: 31 TTDPNPRVGCVLVRDGQVVGEGWHRRAGEPHAEPLALAQAGERARD---ATVYVTLEPCS 87
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC EALI +G+ +V+ A+ DPNP V+G+GV +L AGISV G ++ EA +N
Sbjct: 88 HHGRTPPCAEALIAAGVARVVCAMVDPNPRVAGRGVERLRQAGISVDVGCLESEARALNP 147
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF R ++G P+VR K+A+SLD +T+L S+WITS+ +R D WRA S AI+TG
Sbjct: 148 GFVKRYEQGRPYVRCKLAASLDGRTALATGESKWITSEAARRDVQRWRAGSSAIVTG 204
>gi|424925146|ref|ZP_18348507.1| RibD [Pseudomonas fluorescens R124]
gi|404306306|gb|EJZ60268.1| RibD [Pseudomonas fluorescens R124]
Length = 377
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A K + PNPRVGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALQLARKGHYTTHPNPRVGCVIVRDGQIVGEGFHERAGEPHAEVHAL---RAAGERA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVTAGVARVVAAMRDPNPQVAGRGLQRLTDAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEAEARQLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMDSGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQAAVVLTGAD 203
>gi|381405465|ref|ZP_09930149.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pantoea sp. Sc1]
gi|380738664|gb|EIB99727.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pantoea sp. Sc1]
Length = 366
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIV++ ++ G+ + G HAE+ AL A G
Sbjct: 6 MARALELARRGRFTTMPNPNVGCVIVRDGEVVGEGWHQRAGEPHAEVHALRMA---GEKA 62
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+K+V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 63 RGATAYVTLEPCSHHGRTPPCCDALIAAGVKRVVAAMQDPNPQVAGRGLHRLQQAGIEVS 122
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 123 HGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQRL 182
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 183 RAQSAAILS 191
>gi|156973476|ref|YP_001444383.1| pyrimidine deaminase [Vibrio harveyi ATCC BAA-1116]
gi|156525070|gb|ABU70156.1| hypothetical protein VIBHAR_01166 [Vibrio harveyi ATCC BAA-1116]
Length = 374
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GDKT 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G L AG+ V+
Sbjct: 75 QGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLESEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQRY 194
Query: 180 RARSCAILT 188
RA SC IL+
Sbjct: 195 RALSCGILS 203
>gi|254226773|ref|ZP_04920347.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V51]
gi|125620711|gb|EAZ49071.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V51]
Length = 367
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL+ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLDADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|384425233|ref|YP_005634591.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae LMA3984-4]
gi|327484786|gb|AEA79193.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae LMA3984-4]
Length = 365
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 22 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 79 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARVLN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 139 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 195
>gi|253990958|ref|YP_003042314.1| Riboflavin biosynthesis protein [Photorhabdus asymbiotica]
gi|253782408|emb|CAQ85572.1| Riboflavin biosynthesis protein [Photorhabdus asymbiotica]
Length = 362
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ +SPNP VGCVIV++ +I+ G+ GG HAE+ AL A G
Sbjct: 1 MARALELARQGCFTTSPNPNVGCVIVRDGQIVGEGFHLRSGGPHAEVHALRMA---GDKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V+
Sbjct: 58 KGSTAYVTLEPCSHHGKTPPCADALIAAGVSRVVTAMQDPNPQVAGRGLYKLQQAGIEVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G P++++K+ASSLD +T+L + S+WITS +SR D
Sbjct: 118 HGLMMAEAESLNRGFLKRMRTGFPYIQLKMASSLDGRTALASGESKWITSSQSRYDVQKL 177
Query: 180 RARSCAILTGKN 191
RA+ AIL+ N
Sbjct: 178 RAQCSAILSSSN 189
>gi|443468797|ref|ZP_21059004.1| Riboflavin-specific deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas pseudoalcaligenes KF707]
gi|442898016|gb|ELS24833.1| Riboflavin-specific deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas pseudoalcaligenes KF707]
Length = 368
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +++ G+ G HAE+ AL AA +
Sbjct: 9 MARALELARKGLYSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRQAAER---A 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCADALVAAGVGRVVAAMQDPNPQVAGRGLKRLEDAGIAVS 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM++G+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 126 SGVLEAEAKALNAGFIKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 185
Query: 180 RARSCAILTGKN 191
RAR+ +LTG +
Sbjct: 186 RARASVVLTGAD 197
>gi|255747035|ref|ZP_05420980.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholera CIRS 101]
gi|262161421|ref|ZP_06030531.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae INDRE 91/1]
gi|379742074|ref|YP_005334043.1| riboflavin biosynthesis protein RibD [Vibrio cholerae IEC224]
gi|417814297|ref|ZP_12460950.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-49A2]
gi|417818034|ref|ZP_12464663.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HCUF01]
gi|418338888|ref|ZP_12947782.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-23A1]
gi|418346812|ref|ZP_12951570.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-28A1]
gi|418356058|ref|ZP_12958777.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-61A1]
gi|421318514|ref|ZP_15769082.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1032(5)]
gi|421329486|ref|ZP_15779996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1042(15)]
gi|421333442|ref|ZP_15783919.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1046(19)]
gi|421336984|ref|ZP_15787445.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1048(21)]
gi|421340412|ref|ZP_15790844.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-20A2]
gi|421347907|ref|ZP_15798284.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-46A1]
gi|422897367|ref|ZP_16934811.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-40A1]
gi|422903565|ref|ZP_16938535.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-48A1]
gi|422926498|ref|ZP_16959511.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-38A1]
gi|423145820|ref|ZP_17133414.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-19A1]
gi|423150496|ref|ZP_17137810.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-21A1]
gi|424003248|ref|ZP_17746323.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-17A2]
gi|424025019|ref|ZP_17764669.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-62B1]
gi|424595837|ref|ZP_18035156.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1040(13)]
gi|424599750|ref|ZP_18038928.1| riboflavin biosynthesis protein RibD [Vibrio Cholerae CP1044(17)]
gi|424645798|ref|ZP_18083533.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-56A2]
gi|443515915|ref|ZP_21082425.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-68A1]
gi|443519709|ref|ZP_21086102.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-71A1]
gi|443532194|ref|ZP_21098208.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-7A1]
gi|443539535|ref|ZP_21105389.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-81A1]
gi|449055273|ref|ZP_21733941.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae
O1 str. Inaba G4222]
gi|255735437|gb|EET90837.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholera CIRS 101]
gi|262028732|gb|EEY47386.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae INDRE 91/1]
gi|340036783|gb|EGQ97759.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-49A2]
gi|340037757|gb|EGQ98732.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HCUF01]
gi|341620505|gb|EGS46276.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-48A1]
gi|341621250|gb|EGS46997.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-40A1]
gi|341645888|gb|EGS70012.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-38A1]
gi|356417818|gb|EHH71431.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-21A1]
gi|356422658|gb|EHH76132.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-19A1]
gi|356430530|gb|EHH83739.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-23A1]
gi|356431796|gb|EHH84996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-28A1]
gi|356452556|gb|EHI05235.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-61A1]
gi|378795584|gb|AFC59055.1| riboflavin biosynthesis protein RibD [Vibrio cholerae IEC224]
gi|395916772|gb|EJH27602.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1032(5)]
gi|395928020|gb|EJH38783.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1042(15)]
gi|395928844|gb|EJH39597.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1046(19)]
gi|395932083|gb|EJH42827.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1048(21)]
gi|395939695|gb|EJH50377.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-20A2]
gi|395942486|gb|EJH53162.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-46A1]
gi|395958336|gb|EJH68832.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-56A2]
gi|408031206|gb|EKG67843.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1040(13)]
gi|408041107|gb|EKG77247.1| riboflavin biosynthesis protein RibD [Vibrio Cholerae CP1044(17)]
gi|408845782|gb|EKL85897.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-17A2]
gi|408869874|gb|EKM09161.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-62B1]
gi|443442852|gb|ELS96155.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-68A1]
gi|443446708|gb|ELT03367.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-71A1]
gi|443457584|gb|ELT24981.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-7A1]
gi|443465635|gb|ELT40295.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-81A1]
gi|448265315|gb|EMB02550.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae
O1 str. Inaba G4222]
Length = 365
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 22 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 79 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARVLN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 139 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 195
>gi|238893351|ref|YP_002918085.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|262042437|ref|ZP_06015597.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|402782150|ref|YP_006637696.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|425078121|ref|ZP_18481224.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425080125|ref|ZP_18483222.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425088754|ref|ZP_18491847.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090247|ref|ZP_18493332.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428933373|ref|ZP_19006927.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae JHCK1]
gi|238545667|dbj|BAH62018.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259040212|gb|EEW41323.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|402543012|gb|AFQ67161.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405591100|gb|EKB64613.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601846|gb|EKB74999.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405607050|gb|EKB80020.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405613931|gb|EKB86652.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|426305394|gb|EKV67517.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae JHCK1]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|417792020|ref|ZP_12439432.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii E899]
gi|449309261|ref|YP_007441617.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii SP291]
gi|333953908|gb|EGL71798.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii E899]
gi|449099294|gb|AGE87328.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii SP291]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 117/177 (66%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCVIVKE I+ G+ GG HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPRVGCVIVKEGVIVGEGFHLRAGGPHAEVHALRMA---GDKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 76 SHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAESHAILT 192
>gi|262168270|ref|ZP_06035967.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae RC27]
gi|262023162|gb|EEY41866.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae RC27]
Length = 365
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 22 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 78
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 79 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARVLN 138
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 139 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 195
>gi|152968939|ref|YP_001334048.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150953788|gb|ABR75818.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|156935037|ref|YP_001438953.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii ATCC BAA-894]
gi|156533291|gb|ABU78117.1| hypothetical protein ESA_02888 [Cronobacter sakazakii ATCC BAA-894]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 117/177 (66%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCVIVKE I+ G+ GG HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPRVGCVIVKEGVIVGEGFHLRAGGPHAEVHALRMA---GDKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 76 SHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAESHAILT 192
>gi|398967295|ref|ZP_10681821.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM30]
gi|398144851|gb|EJM33663.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM30]
Length = 377
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGFHERAGEPHAEVHAL---RAAGELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMRDPNPQVAGRGLQRLADAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEAEARQLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ A+LTG +
Sbjct: 192 RAQAAAVLTGAD 203
>gi|258620986|ref|ZP_05716020.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
mimicus VM573]
gi|424807482|ref|ZP_18232890.1| riboflavin biosynthesis protein RibD [Vibrio mimicus SX-4]
gi|258586374|gb|EEW11089.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
mimicus VM573]
gi|342325424|gb|EGU21204.1| riboflavin biosynthesis protein RibD [Vibrio mimicus SX-4]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+G+GV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEVQIGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 SGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|449143621|ref|ZP_21774444.1| riboflavin biosynthesis protein RibD [Vibrio mimicus CAIM 602]
gi|449080619|gb|EMB51530.1| riboflavin biosynthesis protein RibD [Vibrio mimicus CAIM 602]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+G+GV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|365138428|ref|ZP_09345113.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 4_1_44FAA]
gi|363655091|gb|EHL93961.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 4_1_44FAA]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|262404604|ref|ZP_06081159.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. RC586]
gi|262349636|gb|EEY98774.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. RC586]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E L+K+G+ KVI A+ DPNP V+G+GV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLVKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQCFRAQASAILS 197
>gi|333898884|ref|YP_004472757.1| riboflavin biosynthesis protein RibD [Pseudomonas fulva 12-X]
gi|333114149|gb|AEF20663.1| riboflavin biosynthesis protein RibD [Pseudomonas fulva 12-X]
Length = 372
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 9 MARALELARKGLYSTHPNPRVGCVIVRDGKIVGEGWHAKAGEPHAEVHALRQA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +GI +V+ A+ DPNP V+G+G+ +L++AGI+V+
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCADALIAAGITRVVAAMQDPNPEVAGRGLLRLMNAGIAVQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ EA +N GF RM+ G+P VR+K+A SLD +T++ + SQWIT +R
Sbjct: 126 GGVLGAEARALNAGFIKRMETGLPLVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 185
Query: 180 RARSCAILTGKN 191
RARS +L+G +
Sbjct: 186 RARSSVVLSGAD 197
>gi|424591977|ref|ZP_18031401.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1037(10)]
gi|408030015|gb|EKG66696.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1037(10)]
Length = 357
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 14 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 70
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 71 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARVLN 130
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 131 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 187
>gi|386815128|ref|ZP_10102346.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thiothrix
nivea DSM 5205]
gi|386419704|gb|EIJ33539.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thiothrix
nivea DSM 5205]
Length = 371
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + + PNPRVGCVIV+ +I+ G+ + G HAE+ AL A G
Sbjct: 14 MARALQLARRGLYTTHPNPRVGCVIVRNVQIVGEGWHERAGEPHAEVHALRRA---GEAA 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T Y+TLEPCS+ G TPPC AL+++G+K+V+ A+ DPNPLV+G G+ L AGI
Sbjct: 71 HGATAYVTLEPCSHHGRTPPCANALVQAGVKRVVTAMVDPNPLVAGNGLKLLQVAGIETA 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF SRM+R P++R+K+A SLD +T++ + S W+T +R D
Sbjct: 131 SGLLESEARALNPGFISRMERNRPYIRLKMAMSLDGRTAMESGESVWVTGDAARRDVQFL 190
Query: 180 RARSCAILTG 189
RA++ AILTG
Sbjct: 191 RAQAGAILTG 200
>gi|262166346|ref|ZP_06034083.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio mimicus VM223]
gi|262026062|gb|EEY44730.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio mimicus VM223]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+G+GV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEVQIGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 SGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|121729759|ref|ZP_01682198.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V52]
gi|147673692|ref|YP_001217785.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
gi|227118717|ref|YP_002820613.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
gi|421351989|ref|ZP_15802354.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-25]
gi|121628510|gb|EAX60996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V52]
gi|146315575|gb|ABQ20114.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
gi|227014167|gb|ACP10377.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
gi|395952434|gb|EJH63048.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-25]
Length = 367
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARVLN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|15642269|ref|NP_231902.1| riboflavin-specific deaminase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121586201|ref|ZP_01675992.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 2740-80]
gi|153820478|ref|ZP_01973145.1| riboflavin biosynthesis protein RibD [Vibrio cholerae NCTC 8457]
gi|153823263|ref|ZP_01975930.1| riboflavin biosynthesis protein RibD [Vibrio cholerae B33]
gi|227082395|ref|YP_002810946.1| riboflavin biosynthesis protein RibD [Vibrio cholerae M66-2]
gi|229507656|ref|ZP_04397161.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae BX 330286]
gi|229512149|ref|ZP_04401628.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae B33]
gi|229519284|ref|ZP_04408727.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae RC9]
gi|229607160|ref|YP_002877808.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae MJ-1236]
gi|254849400|ref|ZP_05238750.1| riboflavin-specific deaminase [Vibrio cholerae MO10]
gi|298500355|ref|ZP_07010160.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MAK 757]
gi|360036146|ref|YP_004937909.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O1 str.
2010EL-1786]
gi|418335279|ref|ZP_12944190.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-06A1]
gi|418350574|ref|ZP_12955305.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-43A1]
gi|419827228|ref|ZP_14350727.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1033(6)]
gi|421322026|ref|ZP_15772579.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1038(11)]
gi|421325828|ref|ZP_15776352.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1041(14)]
gi|422907450|ref|ZP_16942248.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-70A1]
gi|422914294|ref|ZP_16948799.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HFU-02]
gi|423154315|ref|ZP_17141496.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-22A1]
gi|423157398|ref|ZP_17144491.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-32A1]
gi|423160969|ref|ZP_17147909.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-33A2]
gi|423165796|ref|ZP_17152520.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-48B2]
gi|423731818|ref|ZP_17705121.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-17A1]
gi|423769101|ref|ZP_17713239.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-50A2]
gi|423895963|ref|ZP_17727442.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-62A1]
gi|423931495|ref|ZP_17731835.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-77A1]
gi|424007039|ref|ZP_17750009.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-37A1]
gi|424027905|ref|ZP_17767507.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-69A1]
gi|424587185|ref|ZP_18026763.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1030(3)]
gi|424602511|ref|ZP_18041651.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1047(20)]
gi|424607444|ref|ZP_18046385.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1050(23)]
gi|424611262|ref|ZP_18050101.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-39A1]
gi|424614077|ref|ZP_18052862.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-41A1]
gi|424618051|ref|ZP_18056722.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-42A1]
gi|424622835|ref|ZP_18061340.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-47A1]
gi|424653569|ref|ZP_18090949.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-57A2]
gi|424657388|ref|ZP_18094673.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-81A2]
gi|440710509|ref|ZP_20891157.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae 4260B]
gi|443504616|ref|ZP_21071572.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-64A1]
gi|443508517|ref|ZP_21075278.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-65A1]
gi|443512361|ref|ZP_21078996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-67A1]
gi|443524600|ref|ZP_21090810.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-72A2]
gi|443536002|ref|ZP_21101873.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-80A1]
gi|9656833|gb|AAF95415.1| riboflavin-specific deaminase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549613|gb|EAX59637.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 2740-80]
gi|126508979|gb|EAZ71573.1| riboflavin biosynthesis protein RibD [Vibrio cholerae NCTC 8457]
gi|126519224|gb|EAZ76447.1| riboflavin biosynthesis protein RibD [Vibrio cholerae B33]
gi|227010283|gb|ACP06495.1| riboflavin biosynthesis protein RibD [Vibrio cholerae M66-2]
gi|229343973|gb|EEO08948.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae RC9]
gi|229352114|gb|EEO17055.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae B33]
gi|229355161|gb|EEO20082.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae BX 330286]
gi|229369815|gb|ACQ60238.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae MJ-1236]
gi|254845105|gb|EET23519.1| riboflavin-specific deaminase [Vibrio cholerae MO10]
gi|297541048|gb|EFH77102.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MAK 757]
gi|341620641|gb|EGS46408.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-70A1]
gi|341636536|gb|EGS61231.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HFU-02]
gi|356416655|gb|EHH70280.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-06A1]
gi|356428007|gb|EHH81238.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-22A1]
gi|356439288|gb|EHH92275.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-32A1]
gi|356444246|gb|EHH97058.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-33A2]
gi|356445070|gb|EHH97879.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-43A1]
gi|356450297|gb|EHI03027.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-48B2]
gi|356647300|gb|AET27355.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O1 str.
2010EL-1786]
gi|395917666|gb|EJH28494.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1041(14)]
gi|395919020|gb|EJH29844.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1038(11)]
gi|395958746|gb|EJH69217.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-57A2]
gi|395961426|gb|EJH71754.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-42A1]
gi|395970374|gb|EJH80145.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-47A1]
gi|395972533|gb|EJH82123.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1030(3)]
gi|395975189|gb|EJH84686.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1047(20)]
gi|408006613|gb|EKG44751.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-39A1]
gi|408011690|gb|EKG49495.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-41A1]
gi|408042435|gb|EKG78487.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1050(23)]
gi|408052509|gb|EKG87548.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-81A2]
gi|408608018|gb|EKK81421.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1033(6)]
gi|408622750|gb|EKK95720.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-17A1]
gi|408633378|gb|EKL05739.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-50A2]
gi|408653722|gb|EKL24877.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-77A1]
gi|408654665|gb|EKL25800.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-62A1]
gi|408844893|gb|EKL85016.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-37A1]
gi|408878528|gb|EKM17529.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-69A1]
gi|439973838|gb|ELP50042.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae 4260B]
gi|443431087|gb|ELS73641.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-64A1]
gi|443434925|gb|ELS81071.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-65A1]
gi|443438749|gb|ELS88467.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-67A1]
gi|443449458|gb|ELT09752.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-72A2]
gi|443460892|gb|ELT31972.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-80A1]
Length = 367
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARVLN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|424934828|ref|ZP_18353200.1| Bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|407809015|gb|EKF80266.1| Bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 367
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|378977265|ref|YP_005225406.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419973346|ref|ZP_14488771.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978529|ref|ZP_14493825.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419983916|ref|ZP_14499065.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419989967|ref|ZP_14504941.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995847|ref|ZP_14510652.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420000758|ref|ZP_14515416.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007616|ref|ZP_14522109.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013319|ref|ZP_14527630.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420018403|ref|ZP_14532600.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024495|ref|ZP_14538508.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420030253|ref|ZP_14544080.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420035356|ref|ZP_14549020.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420041690|ref|ZP_14555186.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420047752|ref|ZP_14561068.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053453|ref|ZP_14566631.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420058296|ref|ZP_14571309.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420064584|ref|ZP_14577393.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070329|ref|ZP_14582981.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420076140|ref|ZP_14588613.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420081887|ref|ZP_14594191.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421908638|ref|ZP_16338473.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421915630|ref|ZP_16345228.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|428939264|ref|ZP_19012377.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae VA360]
gi|364516676|gb|AEW59804.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397348818|gb|EJJ41916.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397351600|gb|EJJ44683.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397354967|gb|EJJ47993.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397366831|gb|EJJ59446.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397368488|gb|EJJ61094.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397372973|gb|EJJ65445.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397380268|gb|EJJ72453.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397384317|gb|EJJ76437.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397390360|gb|EJJ82270.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397399110|gb|EJJ90767.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397402074|gb|EJJ93686.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397408092|gb|EJJ99468.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397416592|gb|EJK07765.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397418227|gb|EJK09386.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397424238|gb|EJK15145.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397433290|gb|EJK23940.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397437337|gb|EJK27906.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397441711|gb|EJK32077.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447651|gb|EJK37841.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397452820|gb|EJK42886.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|410117429|emb|CCM81098.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410122139|emb|CCM87853.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426304335|gb|EKV66482.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae VA360]
Length = 367
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|344340684|ref|ZP_08771608.1| riboflavin biosynthesis protein RibD [Thiocapsa marina 5811]
gi|343799365|gb|EGV17315.1| riboflavin biosynthesis protein RibD [Thiocapsa marina 5811]
Length = 400
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A+L + PNPRVGCVIV++ I+ G+ + G HAE AL A G
Sbjct: 22 MARAVQLAELGRFTTDPNPRVGCVIVRDGHIVGEGWHRRAGEPHAERHALTEA---GERA 78
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC + G TPPCT+ L+++G+ +V+ A+ DPNPLV+G+G+ L AG++V+
Sbjct: 79 RGATAYVTLEPCCHQGRTPPCTDGLLEAGVARVVCAMVDPNPLVAGRGLRLLAEAGVTVE 138
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ A +N GF +RM++G P+VR K+A+SLD +T++ + SQWIT + +R D
Sbjct: 139 TGLLETAARALNPGFITRMEQGRPYVRCKLAASLDGRTAMASGESQWITGEAARRDVQRL 198
Query: 180 RARSCAILTG 189
RA S AILTG
Sbjct: 199 RAGSSAILTG 208
>gi|330006909|ref|ZP_08305781.1| riboflavin biosynthesis protein RibD [Klebsiella sp. MS 92-3]
gi|328535663|gb|EGF62112.1| riboflavin biosynthesis protein RibD [Klebsiella sp. MS 92-3]
Length = 367
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|384415866|ref|YP_005625228.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|320016370|gb|ADV99941.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 369
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + +L +SPNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELVRLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 65 RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESSAILS 193
>gi|288936867|ref|YP_003440926.1| riboflavin biosynthesis protein RibD [Klebsiella variicola At-22]
gi|290510077|ref|ZP_06549447.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 1_1_55]
gi|288891576|gb|ADC59894.1| riboflavin biosynthesis protein RibD [Klebsiella variicola At-22]
gi|289776793|gb|EFD84791.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 1_1_55]
Length = 367
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|149378281|ref|ZP_01895992.1| riboflavin biosynthesis protein RibD [Marinobacter algicola DG893]
gi|149357446|gb|EDM45957.1| riboflavin biosynthesis protein RibD [Marinobacter algicola DG893]
Length = 371
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A + ++ PNPRVGCVI + +++ G+ + G HAE AL A G D
Sbjct: 10 MARAVQLAWRGRYSTHPNPRVGCVIARGSKVLGEGWHERAGEAHAETRALSQA---GPDA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +ALI++GI V A DPNP VSG+G+ L AGI V
Sbjct: 67 RGATAYVTLEPCSHFGRTPPCAKALIEAGIAHVFAATKDPNPSVSGRGLDMLREAGIRVT 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GL+ +EA +N GF RM G P+VR+K+A+SLD +T++ + SQWIT ESR D
Sbjct: 127 EGLLAEEAVRLNPGFMKRMNVGRPYVRLKMAASLDGRTAMASGESQWITGSESRRDVQRL 186
Query: 180 RARSCAILTG 189
RA S A+LTG
Sbjct: 187 RAISDAVLTG 196
>gi|407070637|ref|ZP_11101475.1| riboflavin biosynthesis protein RibD [Vibrio cyclitrophicus ZF14]
Length = 359
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 131/190 (68%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M+ A+Q AK I ++PNP VGCVIV+ + +I+ G+ G HAE+ A+ A G
Sbjct: 2 MSRAIQLAKRGIYTTAPNPNVGCVIVQADGQIVGEGFHAKAGEPHAEVHAMRMA---GDK 58
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI V
Sbjct: 59 AKGATAYVTLEPCSHYGRTPPCAEGLIKAQVSKVICAMQDPNPKVAGRGIKILRDAGIEV 118
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ GL++++A ++N F RMQ G+P+V++K+A+SLD +T+L N SQWITS E+R D
Sbjct: 119 EIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSSEARRDVQN 178
Query: 179 WRARSCAILT 188
+RA+S A+L+
Sbjct: 179 YRAKSGAVLS 188
>gi|291616522|ref|YP_003519264.1| RibD [Pantoea ananatis LMG 20103]
gi|291151552|gb|ADD76136.1| RibD [Pantoea ananatis LMG 20103]
Length = 367
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGEPHAEVHALRMA---GDRA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLHRLHQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 124 HGLMMQEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSPAARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|399543751|ref|YP_006557059.1| riboflavin biosynthesis protein RibD [Marinobacter sp. BSs20148]
gi|399159083|gb|AFP29646.1| Riboflavin biosynthesis protein RibD [Marinobacter sp. BSs20148]
Length = 371
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A + ++ PNPRVGCVI + RI+ + + G HAE+ AL A G
Sbjct: 10 MARAVQLAWRGRYSTHPNPRVGCVIARGDRILGESWHERAGEAHAEVRALSLA---GTAA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST Y+TLEPCS+FG TPPC +ALI++G+ +V A DPNP VSG+G+ L +AGI V
Sbjct: 67 RGSTAYVTLEPCSHFGRTPPCAKALIEAGVARVFAATLDPNPNVSGRGLDMLRAAGIRVH 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA ++N GF RM G PWVR+K+A+SLD +T++ + SQWIT ESR+D
Sbjct: 127 VGLLAGEAAKLNPGFMKRMTSGRPWVRLKMAASLDGRTAMASGESQWITGPESRSDVQRL 186
Query: 180 RARSCAILTG 189
RA S AILTG
Sbjct: 187 RAMSDAILTG 196
>gi|358448489|ref|ZP_09158992.1| riboflavin biosynthesis protein RibD [Marinobacter manganoxydans
MnI7-9]
gi|357227277|gb|EHJ05739.1| riboflavin biosynthesis protein RibD [Marinobacter manganoxydans
MnI7-9]
Length = 371
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A + ++ PNPRVGCVI + ++ G+ + G HAE AL A G D
Sbjct: 10 MARAVQLAWRGRYSTHPNPRVGCVIARGDLVLGEGWHERAGEAHAETRALSQA---GPDA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI +G+ V A DPNP VSG+G+ L AGI V
Sbjct: 67 RGATAYVTLEPCSHFGRTPPCARALIDAGVAHVYAATKDPNPSVSGRGLDMLREAGIRVT 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GL+ +EA +N GF RM G PWVR+K+A+SLD +T++ + SQWIT E+R D
Sbjct: 127 EGLLAEEAARLNPGFMKRMNTGRPWVRLKMAASLDGRTAMASGESQWITGPEARRDVQRL 186
Query: 180 RARSCAILTG 189
RA S AILTG
Sbjct: 187 RAISDAILTG 196
>gi|422646401|ref|ZP_16709534.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330959948|gb|EGH60208.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 381
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 16 MARALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGEPHAEVHALRQA---GELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 73 RGATAYVTLEPCSHQGRTPPCADALVDAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 133 CGVLESEARALNKGFLKRMETGRPYVRVKLAMSLDGRTAMASGESQWITGPEARSAVQRL 192
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 193 RAQSSVVLTGAD 204
>gi|385330233|ref|YP_005884184.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Marinobacter adhaerens HP15]
gi|311693383|gb|ADP96256.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Marinobacter adhaerens HP15]
Length = 371
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A + ++ PNPRVGCVI + ++ G+ + G HAE AL A G D
Sbjct: 10 MARAVQLAWRGRYSTHPNPRVGCVIARGDLVLGEGWHERAGEAHAETRALSQA---GPDA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC ALI +G+ V A DPNP VSG+G+ L AGI V
Sbjct: 67 RGATAYVTLEPCSHFGRTPPCARALIDAGVAHVYAATKDPNPSVSGRGLDMLREAGIRVT 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+GL+ +EA +N GF RM G PWVR+K+A+SLD +T++ + SQWIT E+R D
Sbjct: 127 EGLLAEEAARLNPGFMKRMNTGRPWVRLKMAASLDGRTAMASGESQWITGPEARRDVQRL 186
Query: 180 RARSCAILTG 189
RA S AILTG
Sbjct: 187 RAISDAILTG 196
>gi|153216165|ref|ZP_01950304.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 1587]
gi|124114423|gb|EAY33243.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 1587]
Length = 367
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A+ +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQASEL---TRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+GKGV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASAILS 197
>gi|378768290|ref|YP_005196761.1| riboflavin biosynthesis protein RibD [Pantoea ananatis LMG 5342]
gi|386014894|ref|YP_005933171.1| riboflavin biosynthesis protein ribD [Pantoea ananatis AJ13355]
gi|386080423|ref|YP_005993948.1| riboflavin biosynthesis protein ribD [Pantoea ananatis PA13]
gi|327392953|dbj|BAK10375.1| riboflavin biosynthesis protein ribD [Pantoea ananatis AJ13355]
gi|354989604|gb|AER33728.1| riboflavin biosynthesis protein ribD [Pantoea ananatis PA13]
gi|365187774|emb|CCF10724.1| riboflavin biosynthesis protein RibD [Pantoea ananatis LMG 5342]
Length = 367
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGEPHAEVHALRMA---GDRA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLHRLHQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 124 HGLMMQEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSPAARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|78485744|ref|YP_391669.1| riboflavin biosynthesis protein RibD [Thiomicrospira crunogena
XCL-2]
gi|78364030|gb|ABB41995.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Thiomicrospira crunogena XCL-2]
Length = 391
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 122/177 (68%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++ PNP VGCVI +++ II+ G+ + G HAE AL NA V +TVY+TLEPCS
Sbjct: 30 STKPNPAVGCVITQQENIIAEGWHQKAGEPHAERVALANATES---VKGATVYVTLEPCS 86
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC +AL+ SG+ +V+IA+ DPNPLV+G G+ +L AGI V G++ +EA +N
Sbjct: 87 HHGKTPPCADALVDSGVARVVIAMQDPNPLVAGNGIKRLEQAGIVVDSGILSEEAAALNK 146
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF S M P+VR+K+A+SLD +T++ N SQWIT E+R+ H+ RA+ AI+TG
Sbjct: 147 GFVSVMTSNRPFVRLKVANSLDGRTAMANGESQWITGPEARHQVHLMRAQHGAIVTG 203
>gi|326793810|ref|YP_004311630.1| riboflavin biosynthesis protein RibD [Marinomonas mediterranea
MMB-1]
gi|326544574|gb|ADZ89794.1| riboflavin biosynthesis protein RibD [Marinomonas mediterranea
MMB-1]
Length = 383
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+Q AK + + PNPRVGCVIVK+ RII G+ G HAE++AL +A V
Sbjct: 12 MSQAVQLAKKGLYTTHPNPRVGCVIVKDDRIIGEGFHARAGEGHAEVNALASAMES---V 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALIK+GI V+ + DPNP V+G+G+A+L AG+ V
Sbjct: 69 EGATAYVTLEPCSHQGKTPPCADALIKAGIAVVVYGMQDPNPQVAGRGLAKLEKAGVQVI 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+++ E +N+GF RM+ G+P++R+K+A SLD +T++ + SQWIT +R D
Sbjct: 129 GPVLENECERLNLGFNKRMREGLPYIRLKMAMSLDGRTAMESGESQWITGSAARLDVQRL 188
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 189 RAQSDAIVTG 198
>gi|261211387|ref|ZP_05925675.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. RC341]
gi|260839342|gb|EEX65968.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. RC341]
Length = 367
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LI++G+ KVI A+ DPNP V+G+GV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIQAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ AIL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSSAARKDVQRFRAQASAILS 197
>gi|419923214|ref|ZP_14441176.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 541-15]
gi|388394266|gb|EIL55569.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 541-15]
Length = 361
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|110835035|ref|YP_693894.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax borkumensis
SK2]
gi|110648146|emb|CAL17622.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax borkumensis
SK2]
Length = 377
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + + PNPRVGCV+V++ ++ G+ G HAE AL A G
Sbjct: 11 MARALQLARRGLYTTDPNPRVGCVLVRDGAVVGEGFHARAGTPHAERHALAQA---GERA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC +ALI +G+ +V+ A+ DPNPLV+G+G+ +L AGI+
Sbjct: 68 RGATAYVTLEPCSHTGRTGPCADALIDAGVTRVVAAMEDPNPLVAGQGLQRLADAGIATA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF SRM R P++R+KIA+S+D +T++ N SQWIT +R D
Sbjct: 128 VGLLEAEARALNPGFVSRMTRQRPYIRIKIAASVDGRTAMANGESQWITGPAAREDVQRL 187
Query: 180 RARSCAILTG 189
RARS A++TG
Sbjct: 188 RARSSAVITG 197
>gi|415777166|ref|ZP_11488418.1| riboflavin biosynthesis protein RibD [Escherichia coli 3431]
gi|315616646|gb|EFU97263.1| riboflavin biosynthesis protein RibD [Escherichia coli 3431]
Length = 367
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIDAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|170021214|ref|YP_001726168.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli ATCC 8739]
gi|188492525|ref|ZP_02999795.1| riboflavin biosynthesis protein RibD [Escherichia coli 53638]
gi|194438906|ref|ZP_03070991.1| riboflavin biosynthesis protein RibD [Escherichia coli 101-1]
gi|251783919|ref|YP_002998223.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Escherichia coli BL21(DE3)]
gi|253774601|ref|YP_003037432.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160480|ref|YP_003043588.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli B str. REL606]
gi|254287284|ref|YP_003053032.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Escherichia coli BL21(DE3)]
gi|300930291|ref|ZP_07145704.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 187-1]
gi|312970509|ref|ZP_07784690.1| riboflavin biosynthesis protein RibD [Escherichia coli 1827-70]
gi|422785020|ref|ZP_16837759.1| riboflavin biosynthesis protein RibD [Escherichia coli H489]
gi|422791218|ref|ZP_16843921.1| riboflavin biosynthesis protein RibD [Escherichia coli TA007]
gi|432879906|ref|ZP_20096726.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE154]
gi|442596474|ref|ZP_21014285.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|169756142|gb|ACA78841.1| riboflavin biosynthesis protein RibD [Escherichia coli ATCC 8739]
gi|188487724|gb|EDU62827.1| riboflavin biosynthesis protein RibD [Escherichia coli 53638]
gi|194422200|gb|EDX38202.1| riboflavin biosynthesis protein RibD [Escherichia coli 101-1]
gi|242376192|emb|CAQ30883.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Escherichia coli BL21(DE3)]
gi|253325645|gb|ACT30247.1| riboflavin biosynthesis protein RibD [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972381|gb|ACT38052.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli B str. REL606]
gi|253976591|gb|ACT42261.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli BL21(DE3)]
gi|300461863|gb|EFK25356.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 187-1]
gi|310337158|gb|EFQ02296.1| riboflavin biosynthesis protein RibD [Escherichia coli 1827-70]
gi|323963400|gb|EGB58962.1| riboflavin biosynthesis protein RibD [Escherichia coli H489]
gi|323972264|gb|EGB67474.1| riboflavin biosynthesis protein RibD [Escherichia coli TA007]
gi|431413530|gb|ELG96295.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE154]
gi|441655135|emb|CCQ00198.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
Length = 367
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|300818262|ref|ZP_07098473.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 107-1]
gi|415873807|ref|ZP_11540980.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 79-10]
gi|432804492|ref|ZP_20038438.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE91]
gi|432932748|ref|ZP_20132602.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE184]
gi|433192341|ref|ZP_20376363.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE90]
gi|300529153|gb|EFK50215.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 107-1]
gi|342930611|gb|EGU99333.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 79-10]
gi|431357825|gb|ELG44491.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE91]
gi|431456781|gb|ELH37124.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE184]
gi|431721817|gb|ELJ85809.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE90]
Length = 367
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|206578559|ref|YP_002240118.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae 342]
gi|206567617|gb|ACI09393.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae 342]
Length = 367
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKAQGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 76 SHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMNEAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAILT 192
>gi|16128399|ref|NP_414948.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. MG1655]
gi|170080000|ref|YP_001729320.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli str. K-12 substr. DH10B]
gi|238899702|ref|YP_002925498.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli BW2952]
gi|300947935|ref|ZP_07162083.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 116-1]
gi|300957979|ref|ZP_07170144.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 175-1]
gi|301025699|ref|ZP_07189215.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 196-1]
gi|301647336|ref|ZP_07247148.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 146-1]
gi|331640931|ref|ZP_08342066.1| riboflavin biosynthesis protein RibD [Escherichia coli H736]
gi|386279440|ref|ZP_10057121.1| riboflavin biosynthesis protein RibD [Escherichia sp. 4_1_40B]
gi|386596710|ref|YP_006093110.1| riboflavin biosynthesis protein RibD [Escherichia coli DH1]
gi|387610940|ref|YP_006114056.1| riboflavin biosynthesis protein [Escherichia coli ETEC H10407]
gi|387620173|ref|YP_006127800.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
/ 5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli DH1]
gi|388476520|ref|YP_488706.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. W3110]
gi|404373736|ref|ZP_10978971.1| riboflavin biosynthesis protein RibD [Escherichia sp. 1_1_43]
gi|417260818|ref|ZP_12048316.1| riboflavin biosynthesis protein RibD [Escherichia coli 2.3916]
gi|417270506|ref|ZP_12057859.1| riboflavin biosynthesis protein RibD [Escherichia coli 2.4168]
gi|417275300|ref|ZP_12062637.1| riboflavin biosynthesis protein RibD [Escherichia coli 3.2303]
gi|417292923|ref|ZP_12080203.1| riboflavin biosynthesis protein RibD [Escherichia coli B41]
gi|417632898|ref|ZP_12283119.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_S1191]
gi|417945768|ref|ZP_12588997.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli XH140A]
gi|417976614|ref|ZP_12617406.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli XH001]
gi|418301264|ref|ZP_12913058.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNF18]
gi|418959293|ref|ZP_13511192.1| riboflavin biosynthesis protein RibD [Escherichia coli J53]
gi|419140944|ref|ZP_13685701.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6A]
gi|419146592|ref|ZP_13691288.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6B]
gi|419152245|ref|ZP_13696833.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6C]
gi|419173843|ref|ZP_13717699.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7B]
gi|419811843|ref|ZP_14336715.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O32:H37 str. P4]
gi|421776019|ref|ZP_16212625.1| riboflavin biosynthesis protein RibD [Escherichia coli AD30]
gi|422764944|ref|ZP_16818671.1| riboflavin biosynthesis protein RibD [Escherichia coli E1520]
gi|422769642|ref|ZP_16823333.1| riboflavin biosynthesis protein RibD [Escherichia coli E482]
gi|422816428|ref|ZP_16864643.1| riboflavin biosynthesis protein RibD [Escherichia coli M919]
gi|423701195|ref|ZP_17675654.1| riboflavin biosynthesis protein RibD [Escherichia coli H730]
gi|425118507|ref|ZP_18520242.1| riboflavin biosynthesis protein RibD [Escherichia coli 8.0569]
gi|425271109|ref|ZP_18662623.1| riboflavin biosynthesis protein RibD [Escherichia coli TW15901]
gi|425281781|ref|ZP_18672902.1| riboflavin biosynthesis protein RibD [Escherichia coli TW00353]
gi|432415366|ref|ZP_19657997.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE44]
gi|432562324|ref|ZP_19798951.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE51]
gi|432579091|ref|ZP_19815525.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE56]
gi|432625998|ref|ZP_19861983.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE77]
gi|432635728|ref|ZP_19871614.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE81]
gi|432659656|ref|ZP_19895317.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE111]
gi|432684247|ref|ZP_19919566.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE156]
gi|432690304|ref|ZP_19925550.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE161]
gi|432702986|ref|ZP_19938112.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE171]
gi|432735940|ref|ZP_19970716.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE42]
gi|432953547|ref|ZP_20145846.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE197]
gi|433046485|ref|ZP_20233917.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE120]
gi|442590092|ref|ZP_21008876.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|450239517|ref|ZP_21899055.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli S17]
gi|140252|sp|P25539.1|RIBD_ECOLI RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName:
Full=Diaminohydroxyphosphoribosylaminopyrimidine
deaminase; Short=DRAP deaminase; AltName:
Full=Riboflavin-specific deaminase; Includes: RecName:
Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
AltName: Full=HTP reductase
gi|581147|emb|CAA45735.1| unnamed protein product [Escherichia coli K-12]
gi|1773098|gb|AAB40170.1| riboflavin biosynthesis protein RibG [Escherichia coli]
gi|1786616|gb|AAC73517.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. MG1655]
gi|73853031|emb|CAJ28593.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Escherichia coli]
gi|85674554|dbj|BAE76194.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K12 substr. W3110]
gi|169887835|gb|ACB01542.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. DH10B]
gi|238861183|gb|ACR63181.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli BW2952]
gi|260450399|gb|ACX40821.1| riboflavin biosynthesis protein RibD [Escherichia coli DH1]
gi|299880011|gb|EFI88222.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 196-1]
gi|300315315|gb|EFJ65099.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 175-1]
gi|300452535|gb|EFK16155.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 116-1]
gi|301074481|gb|EFK89287.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 146-1]
gi|309700676|emb|CBI99972.1| riboflavin biosynthesis protein [Escherichia coli ETEC H10407]
gi|315135096|dbj|BAJ42255.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
/ 5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli DH1]
gi|323938599|gb|EGB34848.1| riboflavin biosynthesis protein RibD [Escherichia coli E1520]
gi|323943220|gb|EGB39376.1| riboflavin biosynthesis protein RibD [Escherichia coli E482]
gi|331037729|gb|EGI09949.1| riboflavin biosynthesis protein RibD [Escherichia coli H736]
gi|339413362|gb|AEJ55034.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNF18]
gi|342362500|gb|EGU26618.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli XH140A]
gi|344193781|gb|EGV47859.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli XH001]
gi|345391208|gb|EGX21002.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_S1191]
gi|359331174|dbj|BAL37621.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. MDS42]
gi|378000277|gb|EHV63351.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6A]
gi|378001520|gb|EHV64579.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6B]
gi|378003829|gb|EHV66869.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6C]
gi|378037796|gb|EHW00319.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7B]
gi|384377995|gb|EIE35887.1| riboflavin biosynthesis protein RibD [Escherichia coli J53]
gi|385155326|gb|EIF17330.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O32:H37 str. P4]
gi|385539901|gb|EIF86728.1| riboflavin biosynthesis protein RibD [Escherichia coli M919]
gi|385712885|gb|EIG49824.1| riboflavin biosynthesis protein RibD [Escherichia coli H730]
gi|386123439|gb|EIG72035.1| riboflavin biosynthesis protein RibD [Escherichia sp. 4_1_40B]
gi|386225976|gb|EII48301.1| riboflavin biosynthesis protein RibD [Escherichia coli 2.3916]
gi|386236849|gb|EII68821.1| riboflavin biosynthesis protein RibD [Escherichia coli 2.4168]
gi|386241953|gb|EII78866.1| riboflavin biosynthesis protein RibD [Escherichia coli 3.2303]
gi|386252495|gb|EIJ02186.1| riboflavin biosynthesis protein RibD [Escherichia coli B41]
gi|404292775|gb|EJZ49566.1| riboflavin biosynthesis protein RibD [Escherichia sp. 1_1_43]
gi|408198885|gb|EKI24096.1| riboflavin biosynthesis protein RibD [Escherichia coli TW15901]
gi|408206201|gb|EKI31013.1| riboflavin biosynthesis protein RibD [Escherichia coli TW00353]
gi|408458758|gb|EKJ82543.1| riboflavin biosynthesis protein RibD [Escherichia coli AD30]
gi|408573645|gb|EKK49475.1| riboflavin biosynthesis protein RibD [Escherichia coli 8.0569]
gi|430943742|gb|ELC63848.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE44]
gi|431099557|gb|ELE04577.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE51]
gi|431108793|gb|ELE12764.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE56]
gi|431165133|gb|ELE65491.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE77]
gi|431174010|gb|ELE74071.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE81]
gi|431203773|gb|ELF02363.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE111]
gi|431225218|gb|ELF22423.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE156]
gi|431230792|gb|ELF26562.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE161]
gi|431247117|gb|ELF41359.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE171]
gi|431286828|gb|ELF77648.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE42]
gi|431470677|gb|ELH50574.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE197]
gi|431572874|gb|ELI45698.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE120]
gi|441609750|emb|CCP94789.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|449325079|gb|EMD14996.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli S17]
Length = 367
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|386703631|ref|YP_006167478.1| Riboflavin biosynthesis protein ribD [Escherichia coli P12b]
gi|417611446|ref|ZP_12261920.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_EH250]
gi|419941416|ref|ZP_14458104.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 75]
gi|425113741|ref|ZP_18515579.1| riboflavin biosynthesis protein RibD [Escherichia coli 8.0566]
gi|345365931|gb|EGW98029.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_EH250]
gi|383101799|gb|AFG39308.1| Riboflavin biosynthesis protein ribD [Escherichia coli P12b]
gi|388400852|gb|EIL61544.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 75]
gi|408573132|gb|EKK48991.1| riboflavin biosynthesis protein RibD [Escherichia coli 8.0566]
Length = 361
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|404378630|ref|ZP_10983719.1| riboflavin biosynthesis protein RibD [Simonsiella muelleri ATCC
29453]
gi|294483755|gb|EFG31439.1| riboflavin biosynthesis protein RibD [Simonsiella muelleri ATCC
29453]
Length = 363
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 128/180 (71%), Gaps = 7/180 (3%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGYDVYNSTVYITLE 69
++SPNPRVGCVI ++I+ G+ G HAE+ AL A AQG +T Y+TLE
Sbjct: 25 FSTSPNPRVGCVIAHGEQIVGQGFHVKAGEPHAEVHALRQAGSLAQG-----ATAYVTLE 79
Query: 70 PCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYE 129
PC+++G TPPC E+L +SG+ +V+ A+ DPNPLV+GKG+A L +AG+ V+ GL++ +A E
Sbjct: 80 PCAHYGRTPPCAESLRESGVARVVAAMRDPNPLVAGKGLAILTAAGVLVECGLLEHKARE 139
Query: 130 INIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
+N GF SR++R P++ +K+A+S D KT+L + S+WIT + +R+D RA+SCAILTG
Sbjct: 140 LNRGFLSRIERKRPFISLKMAASFDGKTALSDGCSKWITGELARSDVQQLRAQSCAILTG 199
>gi|213969282|ref|ZP_03397420.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213925960|gb|EEB59517.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 366
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 1 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREA---GELA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G G+ +L++AGISV+
Sbjct: 58 RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISVQ 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 118 CGVLESEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 177
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 178 RAQSSVVLTGAD 189
>gi|297517703|ref|ZP_06936089.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli OP50]
Length = 361
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|119774153|ref|YP_926893.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Shewanella amazonensis SB2B]
gi|119766653|gb|ABL99223.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella amazonensis SB2B]
Length = 378
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 121/178 (67%), Gaps = 4/178 (2%)
Query: 13 NSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIV + I+ G+ GG HAE+ AL AA + +T Y+TLEPC
Sbjct: 28 TTRPNPNVGCVIVNDAGDIVGEGWHIRAGGPHAEVHALKAAADK---ARGATAYVTLEPC 84
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC +ALI +G+K+V++A+ DPNP V+G+G+ L AGI V GLM+ EA +N
Sbjct: 85 SHYGRTPPCAKALIDNGLKRVVVAMTDPNPQVAGRGIKLLQDAGIEVAHGLMEAEARALN 144
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM+R P+V +K+ +SLD KT+L + S+WIT E+R D RA+SCA++TG
Sbjct: 145 PGFLSRMERKRPFVTVKVGASLDGKTALSSGESKWITGPEARRDVQRLRAKSCALITG 202
>gi|301381786|ref|ZP_07230204.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato Max13]
gi|302061014|ref|ZP_07252555.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato K40]
gi|302130534|ref|ZP_07256524.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length = 378
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 13 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G G+ +L++AGISV+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|317047149|ref|YP_004114797.1| riboflavin biosynthesis protein RibD [Pantoea sp. At-9b]
gi|316948766|gb|ADU68241.1| riboflavin biosynthesis protein RibD [Pantoea sp. At-9b]
Length = 370
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ G+ G HAE+ AL A G
Sbjct: 7 MARALELARRGCFTTTPNPNVGCVIVRDGEIVGEGWHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIAVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM A IN GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D +
Sbjct: 124 HGLMMNAAEAINRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQRF 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSSAILT 192
>gi|407801226|ref|ZP_11148070.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax sp. W11-5]
gi|407024663|gb|EKE36406.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax sp. W11-5]
Length = 367
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL A+ ++++ PNPRVGCV+V+ I+ G+ + G HAE AL A G
Sbjct: 10 MSRALYLARRGLHTTDPNPRVGCVLVRNGMIVGEGWHQRAGEPHAERHALATA---GEQA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC +AL+++G+ +V+ A+ DPNP V+G+G+A+L AGI V+
Sbjct: 67 RGATCYVTLEPCSHTGRTGPCADALVEAGVARVVAAMQDPNPQVAGQGLARLRDAGIEVE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ A +N GF RM++G+PWVR+K+A S+D +T++ + SQWIT E+R D
Sbjct: 127 CGVLEDAARALNPGFIRRMEQGLPWVRVKLAMSVDGRTAMASGESQWITGAEAREDVQRL 186
Query: 180 RARSCAILTG 189
RARS AI+TG
Sbjct: 187 RARSSAIVTG 196
>gi|386828978|ref|ZP_10116085.1| riboflavin biosynthesis protein RibD [Beggiatoa alba B18LD]
gi|386429862|gb|EIJ43690.1| riboflavin biosynthesis protein RibD [Beggiatoa alba B18LD]
Length = 373
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 130/192 (67%), Gaps = 8/192 (4%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL A+ + ++ PNPRVGCVIV++ I+ G+ + G HAEI AL A AQG
Sbjct: 9 MARALHLAERGLWSTDPNPRVGCVIVRDGEIVGEGWHEVAGEPHAEIYALQMAKEKAQG- 67
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T Y+TLEPC + G TPPCT+ALIK+GI +V+ A DPNP+V+ KG+ QL AGI
Sbjct: 68 ----ATCYVTLEPCCHHGRTPPCTDALIKAGITRVVAASTDPNPIVASKGIEQLNKAGIV 123
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V G++ +A ++N GFF RM+R P++R K+A SLD +T++ + SQWITS+++R D
Sbjct: 124 VNVGVLGAQAEQLNAGFFMRMRRNRPYIRCKLAMSLDGRTAMASGESQWITSQDARRDVQ 183
Query: 178 IWRARSCAILTG 189
RARS A++TG
Sbjct: 184 GLRARSSAVMTG 195
>gi|375130161|ref|YP_004992261.1| riboflavin biosynthesis protein RibD [Vibrio furnissii NCTC 11218]
gi|315179335|gb|ADT86249.1| riboflavin biosynthesis protein RibD [Vibrio furnissii NCTC 11218]
Length = 369
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCVI + + I+ G+ G HAE+ AL A Q +T Y+TLEPC
Sbjct: 24 FTTAPNPNVGCVITQGESIVGEGFHFRAGEPHAEVHALRMAGEQSV---GATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ +VI A+ DPNP V+G+G+ L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGIDMLREAGIEVQVGLLEADALALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
F RM+ G+PWV++K+A+SLD +T+L N SQWITS ++R D +RA++ A+L+
Sbjct: 141 PAFIKRMKTGMPWVQLKMAASLDGQTALANGRSQWITSPQARQDVQAYRAQAGAVLS 197
>gi|229592849|ref|YP_002874968.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
SBW25]
gi|229364715|emb|CAY52681.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase]
[Pseudomonas fluorescens SBW25]
Length = 369
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +++ G+ G HAE+ AL A G
Sbjct: 7 MARALELARKGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHAEVHAL---RAAGDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G+TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI V+
Sbjct: 64 RGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRGMQRLAQAGIDVR 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM++G+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 124 SGVLESEARALNRGFLKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 183
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 184 RAEASVVLTGAD 195
>gi|149909347|ref|ZP_01898003.1| Putative pyrimidine deaminase/pyrimidine reductase [Moritella sp.
PE36]
gi|149807664|gb|EDM67612.1| Putative pyrimidine deaminase/pyrimidine reductase [Moritella sp.
PE36]
Length = 440
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 129/186 (69%), Gaps = 4/186 (2%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
+AL Q K ++PNP VGCV+VK ++I G+ G HAE+ AL +A G D +
Sbjct: 52 IALAQ-KGRFTTAPNPNVGCVLVKADKVIGEGFHLRAGEAHAEVHALNSA---GDDAQGA 107
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPCS++G TPPC AL+ + + +V+IA+ DPNP V+GKG+A LI+AGI V+ GL
Sbjct: 108 TCYVTLEPCSHYGRTPPCAAALVNANVHEVVIAMVDPNPQVAGKGIAILIAAGIKVRVGL 167
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
+ +++ +N GF RM+ P+VR+K+A+SLD +T+L N S+WIT +R+D ++RA+
Sbjct: 168 LSAQSHALNPGFILRMREQRPFVRLKMAASLDGRTALKNGESKWITGSAARSDVQVYRAQ 227
Query: 183 SCAILT 188
+ AIL+
Sbjct: 228 ASAILS 233
>gi|312963303|ref|ZP_07777786.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens WH6]
gi|311282383|gb|EFQ60981.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens WH6]
Length = 378
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 16 MARALELARNGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGQPHAEVHAL---RAAGDKA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G+TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI V+
Sbjct: 73 RGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRGMQRLAQAGIEVR 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 133 SGVLEGEARALNRGFLKRMEHGLPFVRVKMAMSLDGRTAMASGESQWITGPAARAAVQRL 192
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 193 RAEASVVLTGAD 204
>gi|398792083|ref|ZP_10552781.1| riboflavin biosynthesis protein RibD [Pantoea sp. YR343]
gi|398214215|gb|EJN00798.1| riboflavin biosynthesis protein RibD [Pantoea sp. YR343]
Length = 367
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV+E I+ G+ + G HAE+ AL A G
Sbjct: 7 MARALELARRGRFTTTPNPNVGCVIVREGEIVGEGWHQRAGEPHAEVHALRMA---GERA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 AGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 124 HGLMMNEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSSAILS 192
>gi|237797512|ref|ZP_04585973.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020362|gb|EGI00419.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 381
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 16 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGEPHAEVHALRQA---GELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+++G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 73 RGATAYVTLEPCSHQGRTPPCADALVEAGLSRVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P++R+K+A SLD +T++ + SQWIT E+R+
Sbjct: 133 CGVLENEARALNKGFLKRMETGRPYIRVKLAMSLDGRTAMASGESQWITGPEARSAVQRL 192
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 193 RAQSSVVLTGAD 204
>gi|238795566|ref|ZP_04639081.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
mollaretii ATCC 43969]
gi|238720685|gb|EEQ12486.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
mollaretii ATCC 43969]
Length = 369
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A++ + PNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARMGCFTTPPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 65 HGATAYVTLEPCSHHGRTPPCADALVAAGVIRVVAAMQDPNPQVAGRGLYKLKQAGIAVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P++++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESAAILS 193
>gi|28867918|ref|NP_790537.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28851154|gb|AAO54232.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 381
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 16 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREA---GELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G G+ +L++AGISV+
Sbjct: 73 RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISVQ 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 133 CGVLEGEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 192
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 193 RAQSSVVLTGAD 204
>gi|109897636|ref|YP_660891.1| riboflavin biosynthesis protein RibD [Pseudoalteromonas atlantica
T6c]
gi|109699917|gb|ABG39837.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas atlantica T6c]
Length = 372
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M LA++ A K +SPNP VGCVI + I+ G+ + G HAEI A+ A G
Sbjct: 12 MALAIRLAEKGQYTTSPNPNVGCVITDAQGNIVGQGWHQKAGTPHAEIHAIAQA---GER 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPC++ G T PC+EAL+ +G+K+V+ A+ DPNPLV+G G+ +L AG+ V
Sbjct: 69 TKGATAYVTLEPCNHHGRTGPCSEALLDAGVKRVVAAMVDPNPLVAGSGLQKLSDAGVQV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
GL++ EA +N GF RMQ G PWV +K+ASSLD KT+L N SQWIT +R D
Sbjct: 129 SSGLLESEAKALNRGFIKRMQTGKPWVTVKLASSLDGKTALNNGESQWITGPLAREDVQR 188
Query: 179 WRARSCAILTG 189
RA+SCAIL+G
Sbjct: 189 HRAQSCAILSG 199
>gi|260767835|ref|ZP_05876770.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio furnissii CIP 102972]
gi|260617344|gb|EEX42528.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio furnissii CIP 102972]
Length = 369
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCVI + + I+ G+ G HAE+ AL A Q +T Y+TLEPC
Sbjct: 24 FTTAPNPNVGCVITQGESIVGEGFHFRAGEPHAEVHALRMAGEQSV---GATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ +VI A+ DPNP V+G+G+ L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGIDMLREAGIEVQVGLLEADALALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
F RM+ G+PWV++K+A+SLD +T+L N SQWITS ++R D +RA++ A+L+
Sbjct: 141 PAFIKRMKTGMPWVQLKMAASLDGQTALANGRSQWITSPQARQDVQAYRAQAGAVLS 197
>gi|422659609|ref|ZP_16722033.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331018226|gb|EGH98282.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 378
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 13 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G G+ +L++AGISV+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLEGEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|417616802|ref|ZP_12267236.1| riboflavin biosynthesis protein RibD [Escherichia coli G58-1]
gi|345381174|gb|EGX13059.1| riboflavin biosynthesis protein RibD [Escherichia coli G58-1]
Length = 355
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|422590466|ref|ZP_16665121.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330877574|gb|EGH11723.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 378
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 13 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G G+ +L++AGISV+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALISAGLGRVVAAMQDPNPQVAGSGLLRLMTAGISVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|422296705|ref|ZP_16384370.1| riboflavin biosynthesis protein RibD [Pseudomonas avellanae BPIC
631]
gi|407992071|gb|EKG33775.1| riboflavin biosynthesis protein RibD [Pseudomonas avellanae BPIC
631]
Length = 378
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+ + S+ PNPRVGCVIV++ +I+ G+ G +HAE+ AL A G
Sbjct: 13 MAHAVELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGESHAEVHALREA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G G+ +L++AGISV+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|386033419|ref|YP_005953332.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae KCTC 2242]
gi|424829224|ref|ZP_18253952.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339760547|gb|AEJ96767.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae KCTC 2242]
gi|414706643|emb|CCN28347.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 367
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L +GI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQSGIEVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|343508740|ref|ZP_08746052.1| riboflavin-specific deaminase [Vibrio scophthalmi LMG 19158]
gi|342807003|gb|EGU42206.1| riboflavin-specific deaminase [Vibrio scophthalmi LMG 19158]
Length = 368
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ A+ I ++PNP VGCVI ++ +I+ G+ G HAE+ AL A G
Sbjct: 12 MSRAIKLAQGGIYTTAPNPNVGCVITRDDQIVGEGFHYRAGEPHAEVHALRMA---GKLA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP VSG+G+ L AGI V+
Sbjct: 69 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVSGRGINMLREAGIEVQ 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F RMQ G+P+V++K+A+SLD +T+L N SQWITS ++R D +
Sbjct: 129 VGLLEADAQALNPAFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSAQARQDVQAF 188
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 189 RAQSGAILS 197
>gi|304413736|ref|ZP_07395180.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal) and 5-amino-6-(5-phosphoribosylamino)
uracil reductase (C-terminal) [Candidatus Regiella
insecticola LSR1]
gi|304283827|gb|EFL92221.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal) and 5-amino-6-(5-phosphoribosylamino)
uracil reductase (C-terminal) [Candidatus Regiella
insecticola LSR1]
Length = 381
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 133/192 (69%), Gaps = 5/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L ++PNP VGCVIV+E +I+ GY G HAEI+AL A A+ +
Sbjct: 13 MARALELALLGRFTTAPNPNVGCVIVREGKIVGEGYHVRAGEPHAEINALNKAKAKD-EA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+TVY+TLEPC + G TPPCT+ALI +GIK+V++A+ DPNP VSG+G+ QL AGI V
Sbjct: 72 RNATVYVTLEPCCHTGRTPPCTDALIAAGIKRVVVAMPDPNPQVSGRGIYQLQQAGIVVD 131
Query: 120 ---QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDS 176
++ +A +IN GF RM+ P++++K+A+SLD +T++ + SQWITSKE+R D
Sbjct: 132 YIGSTTIKAKAEDINRGFLKRMRTRFPYLQLKMAASLDGRTAMASGESQWITSKEARQDV 191
Query: 177 HIWRARSCAILT 188
+RA+S AIL+
Sbjct: 192 QNFRAQSDAILS 203
>gi|408372489|ref|ZP_11170189.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax hongdengensis
A-11-3]
gi|407767464|gb|EKF75901.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax hongdengensis
A-11-3]
Length = 371
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A++++ + PNPRVGCV+V++ +++ GY G HAE +AL AA G
Sbjct: 10 MARALQLARIALYTTDPNPRVGCVLVRDGQVVGEGYHVRAGEPHAERNAL---AAAGEQA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC +ALI++G+ +V+ A+ DPNP V+G+G+ ++ AGI V
Sbjct: 67 RGATAYVTLEPCSHTGRTGPCADALIEAGVSRVVAAMTDPNPQVAGQGLQRIAEAGIQVA 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF SRM R P++R+KIA+S+D +T++ + SQWIT +R +
Sbjct: 127 SGLLEDEARALNPGFISRMTRQRPYIRIKIAASVDGRTAMASGESQWITGPAARENVQHL 186
Query: 180 RARSCAILTG 189
RARS A++TG
Sbjct: 187 RARSSAVITG 196
>gi|422782797|ref|ZP_16835582.1| riboflavin biosynthesis protein RibD [Escherichia coli TW10509]
gi|323976105|gb|EGB71198.1| riboflavin biosynthesis protein RibD [Escherichia coli TW10509]
Length = 367
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|320540315|ref|ZP_08039967.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Serratia symbiotica str. Tucson]
gi|320029635|gb|EFW11662.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Serratia symbiotica str. Tucson]
Length = 371
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L ++PNP VGCVIV++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFKLARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALCMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ QL AGI V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVTAMQDPNPQVAGRGLYQLQQAGIEVC 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G P+V++K+A SLD +T++ + SQWITS ++R D
Sbjct: 125 HGLMLAEAEAVNPGFLKRMRTGFPYVQLKLAVSLDGRTAMASGESQWITSSQARQDVQRL 184
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 185 RAQSAAILS 193
>gi|336315123|ref|ZP_08570035.1| riboflavin biosynthesis protein RibD [Rheinheimera sp. A13L]
gi|335880534|gb|EGM78421.1| riboflavin biosynthesis protein RibD [Rheinheimera sp. A13L]
Length = 374
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
+K ++PNP VG VIV++ I+ GY + GG HAE+ AL + + +T Y+T
Sbjct: 19 SKGRFTTAPNPNVGSVIVRDGEIVGEGYHRQAGGPHAEVFALRQSE---HLASGATCYVT 75
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS++G T PC AL+ +G+KKVI+A+ DPNPLV+GKG+ L AGI V+ GL++++A
Sbjct: 76 LEPCSHYGRTGPCALALVNAGVKKVIVAMLDPNPLVAGKGIQILKDAGIEVQVGLLEEKA 135
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF SRM+R P++R+K+A+SLD + +L N SQWI+S ESR+D + RA+S A+L
Sbjct: 136 RALNPGFLSRMERQKPYIRLKLATSLDGRIALSNGKSQWISSAESRSDVQMMRAQSHAVL 195
Query: 188 T 188
+
Sbjct: 196 S 196
>gi|419411014|ref|ZP_13951688.1| riboflavin biosynthesis protein RibD, partial [Escherichia coli
DEC15E]
gi|378261505|gb|EHY21299.1| riboflavin biosynthesis protein RibD, partial [Escherichia coli
DEC15E]
Length = 220
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|27363797|ref|NP_759325.1| riboflavin biosynthesis protein RibD [Vibrio vulnificus CMCP6]
gi|27359914|gb|AAO08852.1| riboflavin biosynthesis protein RibD [Vibrio vulnificus CMCP6]
Length = 368
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNP VGCV++++ I+ G+ G HAE+ A+ A G +T Y+TLEPCS
Sbjct: 25 TTAPNPNVGCVLLRDGEIVGEGFHFRAGEPHAEVHAMRMA---GDKAKGATAYVTLEPCS 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC E LIK+G+ +V+ A+ DPNP V+G+G A L AGI V GL+Q EA +N
Sbjct: 82 HYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFAMLREAGIEVSVGLLQAEAEALNP 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
F RM+ G+P+V++K+A+SLD +T+L N SQWITS ++R D +RA+S AIL+
Sbjct: 142 AFIKRMKMGMPFVQLKMAASLDGQTALANGKSQWITSPQARRDVQRFRAQSGAILS 197
>gi|392953434|ref|ZP_10318988.1| hypothetical protein WQQ_30600 [Hydrocarboniphaga effusa AP103]
gi|391858949|gb|EIT69478.1| hypothetical protein WQQ_30600 [Hydrocarboniphaga effusa AP103]
Length = 402
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 128/190 (67%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M ALQ A L +++ PNPRVG V+V + I G+ + G HAE+ AL A G
Sbjct: 1 MARALQLAALGRLSTFPNPRVGAVVVSPDGEIAGEGWHQRAGEAHAEVFAL---RAAGER 57
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+ +Y+TLEPCS+ G TPPC +A+I +G+++VI+A+ DPNPLVSG+G+ +L +AGI V
Sbjct: 58 ARGADLYVTLEPCSHHGRTPPCADAVITAGVRRVIVAMRDPNPLVSGRGLDRLRAAGIVV 117
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G+MQ A +N GF SRM+RG P+V +K+ +SLD +T+ + SQWITS E+R D H
Sbjct: 118 ETGVMQAAALNLNRGFVSRMERGRPFVTLKLGASLDGRTATASGESQWITSSEARADVHR 177
Query: 179 WRARSCAILT 188
RA + A+LT
Sbjct: 178 LRAEAGAVLT 187
>gi|293392571|ref|ZP_06636891.1| riboflavin biosynthesis protein RibD [Serratia odorifera DSM 4582]
gi|291424973|gb|EFE98182.1| riboflavin biosynthesis protein RibD [Serratia odorifera DSM 4582]
Length = 370
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L ++PNP VGCVIV++ +I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTAPNPNVGCVIVRDGQIVGEGYHLRAGEPHAEVHALRMA---GKRA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V+
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALIDAGVSRVVAAMQDPNPQVAGRGLYKLQQAGIEVR 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P+V++K+ +SLD T++ + SQWITS ++R D
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYVQLKLGASLDGCTAMASGESQWITSPQARQDVQRL 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESAAILS 193
>gi|422651849|ref|ZP_16714640.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964923|gb|EGH65183.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 378
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 13 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G G+ +L++AGISV+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALISAGLGRVVAAMQDPNPQVAGSGLLRLMTAGISVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLEGEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|429083915|ref|ZP_19146941.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter condimenti 1330]
gi|426547269|emb|CCJ72982.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter condimenti 1330]
Length = 367
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 121/188 (64%), Gaps = 6/188 (3%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
+TLA Q + PNPRVGCVIVK+ I+ G+ G HAE+ AL A G
Sbjct: 11 LTLASQG---RFTTHPNPRVGCVIVKDGTIVGEGFHYRAGEPHAEVHALRMA---GDKAR 64
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 65 GATAYVTLEPCSHHGRTPPCCDALINAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIEVSH 124
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
GLM EA +N GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D R
Sbjct: 125 GLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMANGESQWITSPQARQDVQRLR 184
Query: 181 ARSCAILT 188
A S AILT
Sbjct: 185 AESHAILT 192
>gi|416895837|ref|ZP_11925721.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_7v]
gi|417114451|ref|ZP_11965722.1| riboflavin biosynthesis protein RibD [Escherichia coli 1.2741]
gi|422802290|ref|ZP_16850784.1| riboflavin biosynthesis protein RibD [Escherichia coli M863]
gi|323965096|gb|EGB60555.1| riboflavin biosynthesis protein RibD [Escherichia coli M863]
gi|327254735|gb|EGE66351.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_7v]
gi|386141526|gb|EIG82676.1| riboflavin biosynthesis protein RibD [Escherichia coli 1.2741]
Length = 367
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|258627340|ref|ZP_05722124.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
mimicus VM603]
gi|258580378|gb|EEW05343.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
mimicus VM603]
Length = 367
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVI + ++I+ G+ G HAE+ A+ A G +T Y+TLEPC
Sbjct: 24 FTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQA---GELTRGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S++G TPPC E LIK+G+ KVI A+ DPNP V+G+GV L AGI V+ GL++ +A +N
Sbjct: 81 SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEVEVGLLEADARALN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G+P+V++K+A+SLD +T+L N SQWITS +R D +RA++ IL+
Sbjct: 141 RGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQASTILS 197
>gi|407794404|ref|ZP_11141431.1| riboflavin biosynthesis protein RibD [Idiomarina xiamenensis
10-D-4]
gi|407213004|gb|EKE82865.1| riboflavin biosynthesis protein RibD [Idiomarina xiamenensis
10-D-4]
Length = 370
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 128/192 (66%), Gaps = 7/192 (3%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+L ++PNP VGCV+VK+ +++ G+ + G HAE+ AL A G
Sbjct: 13 MLHALELARLGQFTTAPNPNVGCVLVKDGELVAEGWHRCAGEPHAEVHAL---QAAGGRA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +ALI++ + +V++A+ DPNP V+G G+A+L +AGI V
Sbjct: 70 RGATAYVTLEPCSHYGRTPPCADALIRAQVARVVVAMEDPNPQVAGAGLARLKAAGIDVV 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ A +N GF +RM+R PW+R+K+A+SLD T+L N SQWIT D +W
Sbjct: 130 SGVQSAAAERLNQGFCARMRRQRPWLRVKLAASLDGATALANGESQWITGG---ADVQVW 186
Query: 180 RARSCAILTGKN 191
RA+S AILTG +
Sbjct: 187 RAKSHAILTGAD 198
>gi|289675578|ref|ZP_06496468.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. syringae FF5]
Length = 194
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 127/184 (69%), Gaps = 4/184 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV+E RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+ +V+ A+ DPNP VSG+G+ +L++AGISV+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGISVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARS 183
RA S
Sbjct: 190 RAPS 193
>gi|398852092|ref|ZP_10608761.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM80]
gi|398244968|gb|EJN30500.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM80]
Length = 377
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCV+V++ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHERAGEPHAEVHAL---RAAGELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMRDPNPQVAGRGLQRLADAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ N SQWIT +R+
Sbjct: 132 SGVLEAEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMENGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQAAVVLTGAD 203
>gi|144897824|emb|CAM74688.1| Riboflavin biosynthesis protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 370
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL AK + N PNP VGCVIV + R++ G+T+ G HAE +AL A G
Sbjct: 14 MRAALALAKRGLGNVWPNPAVGCVIVADGRVVGRGWTQPGGRPHAETEAL---AMAGALA 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
T Y+TLEPCS+ G TPPC EAL+ +GI++V++AI DP+P V+G+G+A L +AG+SV
Sbjct: 71 RGGTAYVTLEPCSHHGKTPPCAEALVAAGIRRVVVAIQDPDPRVAGRGIALLQAAGLSVV 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M +EA E+N GF S++ RG P V +K+A++LD + + + S+WIT +R H+
Sbjct: 131 TGVMAEEAAELNAGFLSKVTRGRPLVTVKLATTLDGRIATHGGESRWITGAAARQAGHLL 190
Query: 180 RARSCAILTGKN 191
RA + AI+ G
Sbjct: 191 RAETDAIMVGSG 202
>gi|387895873|ref|YP_006326170.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens A506]
gi|387164145|gb|AFJ59344.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens A506]
Length = 375
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +I+ G+ + G HAE +AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNAL---RAAGDKA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +AL+ +G+ +V+ + DPNP V+G+G+ +L AGI V+
Sbjct: 70 RGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+RG+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 130 SGVLETEARALNPGFLKRMERGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 189
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 190 RAEASVVLTGAD 201
>gi|422023850|ref|ZP_16370352.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia sneebia DSM 19967]
gi|414091865|gb|EKT53546.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia sneebia DSM 19967]
Length = 375
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A++ +SPNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MARALELAQIGRFTTSPNPNVGCVIVRDDEIVGEGYHQKAGEPHAEVHALHMA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALIK+G+ +V+ A+ DPNP VSG+G+ L AGI +
Sbjct: 66 QGATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVAAMQDPNPQVSGRGLYMLSKAGIETQ 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ ++A IN GF RM+ P+V++K+A+SLD KT+L + S+WITS +R D +
Sbjct: 126 SGVLMEQAEFINRGFLKRMRTAFPYVQLKLAASLDGKTALASGESKWITSAAARRDVQVL 185
Query: 180 RARSCAILT 188
RA + AIL+
Sbjct: 186 RAEASAILS 194
>gi|419862437|ref|ZP_14385042.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O103:H25 str. CVM9340]
gi|388345194|gb|EIL10980.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O103:H25 str. CVM9340]
Length = 367
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A + D
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKD- 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 66 --ATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|449052980|ref|ZP_21732399.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae hvKP1]
gi|448875765|gb|EMB10772.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae hvKP1]
Length = 367
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGVHYRAGEPHAEVHALRMA---GEKARGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PWV++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|37679045|ref|NP_933654.1| pyrimidine reductase [Vibrio vulnificus YJ016]
gi|37197787|dbj|BAC93625.1| pyrimidine reductase [Vibrio vulnificus YJ016]
Length = 368
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 121/176 (68%), Gaps = 3/176 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNP VGCV++++ I+ G+ G HAE+ A+ AA + +T Y+TLEPCS
Sbjct: 25 TTAPNPNVGCVLLRDGEIVGEGFHFRAGEPHAEVHAMRMAADKAK---GATAYVTLEPCS 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC E LIK+G+ +V+ A+ DPNP V+G+G A L AGI V GL+Q EA +N
Sbjct: 82 HYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFAMLREAGIEVSVGLLQAEAEALNP 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
F RM+ G+P+V++K+A+SLD +T+L N SQWITS ++R D +RA+S AIL+
Sbjct: 142 AFIKRMKTGMPFVQLKMAASLDGQTALANGKSQWITSPQARRDVQRFRAQSGAILS 197
>gi|419157753|ref|ZP_13702279.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6D]
gi|419162686|ref|ZP_13707166.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6E]
gi|378014227|gb|EHV77133.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6D]
gi|378017152|gb|EHV80027.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6E]
Length = 367
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKS 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|320157206|ref|YP_004189585.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio vulnificus MO6-24/O]
gi|319932518|gb|ADV87382.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Vibrio vulnificus MO6-24/O]
Length = 368
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNP VGCV++++ I+ G+ G HAE+ A+ A G +T Y+TLEPCS
Sbjct: 25 TTAPNPNVGCVLLRDGEIVGEGFHFRAGEPHAEVHAMRMA---GDKAKGATAYVTLEPCS 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC E LIK+G+ +V+ A+ DPNP V+G+G A L AGI V GL+Q EA +N
Sbjct: 82 HYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFAMLREAGIEVSVGLLQTEAEALNP 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
F RM+ G+P+V++K+A+SLD +T+L N SQWITS ++R D +RA+S AIL+
Sbjct: 142 AFIKRMKTGMPFVQLKMAASLDGQTALANGKSQWITSPQARRDVQRFRAQSGAILS 197
>gi|163783070|ref|ZP_02178065.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881750|gb|EDP75259.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 362
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+LAL AK + PNP VGCV+V E I+ GY + G HAE+ AL A G
Sbjct: 7 MSLALSLAKRRKGLTHPNPTVGCVVVNEGEIVGLGYHEGAGHPHAEVVALEQA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPC++FG TPPCT+ALI++GI+K ++A+ DPNP+V GKG+ +L AG+ V+
Sbjct: 64 KGSTLYVTLEPCTHFGRTPPCTDALIRAGIRKAVVAVKDPNPVVGGKGIERLREAGLDVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++EA E+N FF+ + P+V +K+A +LD K + + S+WI+S ESR +H
Sbjct: 124 VGVLEEEARELNEDFFTFITMKRPYVTLKLAQTLDGKVATPSGDSKWISSPESRRFAHRL 183
Query: 180 RARSCAILTGKN 191
R+ + A+L G N
Sbjct: 184 RSEATAVLVGLN 195
>gi|354722287|ref|ZP_09036502.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter mori LMG 25706]
Length = 367
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVKE I+ GY G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKEGEIVGEGYHLRAGEPHAEVHALRMA---GEKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC EALI +G+ +V+ ++ DPNP V+G+G+ +L GI V GLM ++A IN
Sbjct: 76 SHHGRTPPCCEALIAAGVSRVVASMQDPNPQVAGRGLYRLQQEGIDVSHGLMMQDAEAIN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQRLRAQSHAILT 192
>gi|343513787|ref|ZP_08750882.1| riboflavin-specific deaminase [Vibrio sp. N418]
gi|342801406|gb|EGU36872.1| riboflavin-specific deaminase [Vibrio sp. N418]
Length = 368
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ A+ I ++PNP VGCVI ++ +I+ G+ G HAE+ AL A G
Sbjct: 12 MSRAIKLAQGGIYTTAPNPNVGCVITRDDQIVGEGFHYRAGEPHAEVHALRMA---GKLA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP VSG+G+ L AGI V+
Sbjct: 69 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVSGRGINMLREAGIEVQ 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F RMQ G+P+V++K+A+SLD +T+L N SQWITS ++R D +
Sbjct: 129 VGLLEADAQALNPTFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSAQARQDVQAF 188
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 189 RAQSGAILS 197
>gi|32491211|ref|NP_871465.1| hypothetical protein WGLp462 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166418|dbj|BAC24608.1| ribD [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 384
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 125/186 (67%), Gaps = 4/186 (2%)
Query: 4 ALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
A A+L + PNP VGCVIV K I+ GY K PG +HAEI AL A G S
Sbjct: 13 AFNLAELGKFTTHPNPNVGCVIVLNKSIVGEGYHKIPGSDHAEICALKLA---GKYAKGS 69
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
TVY+TLEPCS+ G TP C +ALI + +K+VI + DPNPLVSGKG + L +AGI VK +
Sbjct: 70 TVYVTLEPCSHHGKTPSCAQALINAKVKEVIASAVDPNPLVSGKGFSMLKNAGIKVKYNI 129
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
M +++ ++N+GFF RM+ GIPW+ +K+ SS+D +T+ S+WITS ESR D + RA+
Sbjct: 130 MSEKSIKLNLGFFKRMKYGIPWITLKLGSSIDGRTATKKGISKWITSVESRKDVQVLRAK 189
Query: 183 SCAILT 188
S AIL+
Sbjct: 190 SGAILS 195
>gi|365175133|ref|ZP_09362571.1| riboflavin biosynthesis protein RibD [Synergistes sp. 3_1_syn1]
gi|363613998|gb|EHL65503.1| riboflavin biosynthesis protein RibD [Synergistes sp. 3_1_syn1]
Length = 364
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 3/189 (1%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
M AL+ A+ SPNPRVGCV+V++ II G+ K GG HAE++A+ +A G D+
Sbjct: 13 MNCALELARNGRRCSPNPRVGCVVVRDGVIIGRGWHKICGGPHAEVEAVRDA---GGDIA 69
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
+ VY+TLEPCS++G TPPC + L ++V+ + DPNP V+G+G+ +L +AG+ VK
Sbjct: 70 EADVYVTLEPCSHYGRTPPCADMLAAHRPRRVVAGMADPNPRVAGRGLEKLRAAGVEVKC 129
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
GL++ E +N GF RM G PWV +K A+SLD KT+L S+WIT ESR H R
Sbjct: 130 GLLEDECRWMNRGFIRRMSMGRPWVTVKCAASLDGKTALAGGESKWITGVESRARVHAMR 189
Query: 181 ARSCAILTG 189
A S A+LTG
Sbjct: 190 AESDAVLTG 198
>gi|288818291|ref|YP_003432639.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|384129051|ref|YP_005511664.1| riboflavin biosynthesis protein RibD [Hydrogenobacter thermophilus
TK-6]
gi|288787691|dbj|BAI69438.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|308751888|gb|ADO45371.1| riboflavin biosynthesis protein RibD [Hydrogenobacter thermophilus
TK-6]
Length = 361
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AKL + PNP VGCVIVK+ +II+ GY + G HAE AL A Q
Sbjct: 10 MRRALELAKLRKGLTHPNPTVGCVIVKDGKIIAEGYHEKVGMPHAEAVALEKAGTQAE-- 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPC+++G TPPCT+A+I++ +K+V+IA DPNPLVSG+GV +L AGI V
Sbjct: 68 -GSTLYVTLEPCTHYGRTPPCTDAIIRAKVKRVVIATLDPNPLVSGRGVQKLRDAGIDVC 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA E+N FF+ + + P++ +K+A S+D + + + SQWIT++ESR +H
Sbjct: 127 VGVLEDEARELNEDFFTYITQKRPYITLKLAQSIDGRIATKHGESQWITNQESRTFAHRL 186
Query: 180 RARSCAILTGKN 191
RA++ A+L G N
Sbjct: 187 RAQATAVLVGIN 198
>gi|440229709|ref|YP_007343502.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Serratia
marcescens FGI94]
gi|440051414|gb|AGB81317.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Serratia
marcescens FGI94]
Length = 370
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L ++PNP VGCVIV++ +I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTAPNPNVGCVIVRDGKIVGEGYHLRAGEPHAEVHALRMA---GELA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALINAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVS 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G P+V++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 125 HGLMLAEAEAVNRGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESAAILS 193
>gi|269138330|ref|YP_003295030.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda EIB202]
gi|387867049|ref|YP_005698518.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Edwardsiella tarda FL6-60]
gi|267983990|gb|ACY83819.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda EIB202]
gi|304558362|gb|ADM41026.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Edwardsiella tarda FL6-60]
Length = 373
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCV+V++ RI+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 25 FTTTPNPNVGCVLVRDDRIVGEGFHLRAGEPHAEVHALRMA---GELARGATAYVTLEPC 81
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGISV+ G+M EA IN
Sbjct: 82 SHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGLYRLQQAGISVRHGVMLAEAEAIN 141
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P+V++K+ +SLD +T++ + SQWITS +R D +RA+S AIL+
Sbjct: 142 KGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSAAARADVQRYRAQSSAILS 198
>gi|325276595|ref|ZP_08142337.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. TJI-51]
gi|324098274|gb|EGB96378.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. TJI-51]
Length = 376
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLFTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGRGLRRLAEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGVPYVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|430375983|ref|ZP_19430386.1| riboflavin biosynthesis protein RibD [Moraxella macacae 0408225]
gi|429541214|gb|ELA09242.1| riboflavin biosynthesis protein RibD [Moraxella macacae 0408225]
Length = 348
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQ-GYD 58
M++A+ AK + PNP VGCVIVK+ ++I GY G HAE+ AL A + G D
Sbjct: 10 MSIAINLAKKGQFTTRPNPCVGCVIVKDNQVIGQGYHYKAGQPHAEVFALRQAIQKIGDD 69
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+ +T Y+TLEPCS++G TPPC +ALIK+G+ +V+IA +DPNP V G G+A+L AGI+V
Sbjct: 70 LMGATAYVTLEPCSHYGRTPPCADALIKAGVSRVVIATSDPNPKVLGAGIAKLQHAGINV 129
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ Q +A +N GF M G+P+VR+KIA SLD K ++ N S+WIT ++R+D
Sbjct: 130 TTNVCQDDAKNLNQGFLKTMAGGLPYVRLKIACSLDGKIAMTNGESKWITGDKARDDVQK 189
Query: 179 WRARSCAILTG 189
RA S AI+TG
Sbjct: 190 LRAVSGAIITG 200
>gi|398879882|ref|ZP_10634963.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM67]
gi|398195200|gb|EJM82251.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM67]
Length = 377
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIVK+ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVKDGQIVGEGWHERTGEPHAEVHAL---RAAGEKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+++
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGLARVVAAMQDPNPSVAGRGMQRLAQAGIAIE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|311280696|ref|YP_003942927.1| riboflavin biosynthesis protein RibD [Enterobacter cloacae SCF1]
gi|308749891|gb|ADO49643.1| riboflavin biosynthesis protein RibD [Enterobacter cloacae SCF1]
Length = 368
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNPRVGCVIV++ I+ G+ G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPRVGCVIVRDGDIVGEGFHLRAGEPHAEVHALRMA---GDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AG+ V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGVEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G PW+++K+ +SLD T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPWLQLKLGASLDGGTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|423106944|ref|ZP_17094639.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5243]
gi|376389070|gb|EHT01762.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5243]
Length = 367
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L G+ V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCEALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQEGVDVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PW+++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|344940639|ref|ZP_08779927.1| riboflavin biosynthesis protein RibD [Methylobacter tundripaludum
SV96]
gi|344261831|gb|EGW22102.1| riboflavin biosynthesis protein RibD [Methylobacter tundripaludum
SV96]
Length = 361
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 119/178 (66%), Gaps = 4/178 (2%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
+ PNPRVGCV+V++ +I G+ G HAE++AL N D +T Y+TLEPCS+
Sbjct: 24 TDPNPRVGCVLVRDGEVIGQGWHVKAGQGHAEVEALKNVP----DAKGATAYVTLEPCSH 79
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
G TPPC +ALIK+G+ +V+ A+ DPNP VSG G+ +L AGI V G++Q++A +N G
Sbjct: 80 QGRTPPCCDALIKAGVSRVVAAMQDPNPQVSGSGLKKLKVAGIEVICGVLQEDALALNRG 139
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
F RM P+VR K+A SLD +T++ + S+WITS E+R D H RA S AILTG N
Sbjct: 140 FIKRMTDSRPFVRSKLAMSLDGRTAMASGESKWITSNEARADVHRLRAESSAILTGIN 197
>gi|407694657|ref|YP_006819445.1| riboflavin biosynthesis protein RibD [Alcanivorax dieselolei B5]
gi|407251995|gb|AFT69102.1| Riboflavin biosynthesis protein RibD [Alcanivorax dieselolei B5]
Length = 371
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + + PNPRVGCV+ K +II+ G+ G HAE AL A G +
Sbjct: 11 MIRALQLARQGLYTTDPNPRVGCVLAKGGQIIAEGFHARAGEPHAERHALTTA---GAEA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC +ALIK+G+ +V+ A+ DPNP V+G G +L +AGI V+
Sbjct: 68 RGATAYVTLEPCSHTGRTGPCADALIKAGVARVVAAMEDPNPQVAGNGFGKLRAAGIQVE 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + EA +N GF RM+ PWVR+K+A+S+D +T++ + SQWIT ++R D
Sbjct: 128 VGLQESEARALNPGFIRRMRGERPWVRIKVAASVDGRTAMASGESQWITGPQAREDVQRL 187
Query: 180 RARSCAILTG 189
RARS A++TG
Sbjct: 188 RARSSAVITG 197
>gi|238918989|ref|YP_002932503.1| riboflavin biosynthesis protein RibD, putative [Edwardsiella
ictaluri 93-146]
gi|238868557|gb|ACR68268.1| riboflavin biosynthesis protein RibD, putative [Edwardsiella
ictaluri 93-146]
Length = 373
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCV+V++ RI+ G+ G HAE+ AL A Q +T Y+TLEPC
Sbjct: 25 FTTTPNPNVGCVLVRDDRIVGEGFHLRAGEPHAEVLALRMAGEQAR---GATAYVTLEPC 81
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V+ GLM EA IN
Sbjct: 82 SHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGLYRLQQAGIAVQHGLMLAEAEAIN 141
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P+V++K+ +SLD +T++ + SQWITS +R D +RA+S AIL+
Sbjct: 142 KGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSAAARADVQRYRAQSSAILS 198
>gi|417320588|ref|ZP_12107131.1| riboflavin-specific deaminase [Vibrio parahaemolyticus 10329]
gi|328472537|gb|EGF43400.1| riboflavin-specific deaminase [Vibrio parahaemolyticus 10329]
Length = 374
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+ I ++PNP VGCVIV++ II GY G HAE+ A+ A G
Sbjct: 18 MSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEPHAEVHAMRMA---GDKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQCY 194
Query: 180 RARSCAILT 188
RA+S IL+
Sbjct: 195 RAQSGGILS 203
>gi|433656955|ref|YP_007274334.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
parahaemolyticus BB22OP]
gi|432507643|gb|AGB09160.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
parahaemolyticus BB22OP]
Length = 374
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+ I ++PNP VGCVIV++ II GY G HAE+ A+ A G
Sbjct: 18 MSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEPHAEVHAMRMA---GDKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQCY 194
Query: 180 RARSCAILT 188
RA+S IL+
Sbjct: 195 RAQSGGILS 203
>gi|209694491|ref|YP_002262419.1| pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis
protein RibD) [Aliivibrio salmonicida LFI1238]
gi|208008442|emb|CAQ78607.1| pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis
protein RibD) [Aliivibrio salmonicida LFI1238]
Length = 373
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q AK I ++PNP VGCV+VK I+ G G HAE+ AL A+ +
Sbjct: 11 MQRAIQLAKRGIYTTAPNPNVGCVLVKNGLIVGEGAHLKAGEPHAEVHALRQASE---NA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+G+ KVI A+ DPNP V+G+G+A L +AGI
Sbjct: 68 KGATAYVTLEPCSHYGRTPPCAEGLIKAGVVKVICAMVDPNPQVAGRGLAMLEAAGIETA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ E+ +N F +RM+ G P+V++K+A+SLD KT+L N SQWITSKE+R D +
Sbjct: 128 SGLLETESRALNPSFLTRMETGKPFVQLKMAASLDGKTALKNGVSQWITSKEARQDVQRY 187
Query: 180 RARSCAILT 188
RA++ IL+
Sbjct: 188 RAQAGVILS 196
>gi|387770216|ref|ZP_10126399.1| riboflavin biosynthesis protein RibD [Pasteurella bettyae CCUG
2042]
gi|386904578|gb|EIJ69367.1| riboflavin biosynthesis protein RibD [Pasteurella bettyae CCUG
2042]
Length = 373
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ AK ++PNP VGCV+VK I+ G+ G HAE+ A+ A G
Sbjct: 12 MQLAMELAAKGQFTTTPNPAVGCVLVKNGNIVGKGFHFKAGEPHAEVMAMREA---GEKA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + LI++GI KVI+A+ DPNP VSGKG+ L+ AGI
Sbjct: 69 KGATAYVTLEPCSHFGRTPPCAKGLIEAGIAKVIVAMQDPNPSVSGKGLKMLMDAGIETS 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q++A +N GF RM+ G+P++++K+A S+D +T+ S+WIT +++R D +
Sbjct: 129 VGLLQEQAEALNKGFLKRMRTGMPYLQLKMAMSIDGRTATAEGESKWITGEQARADVQLQ 188
Query: 180 RARSCAILTGKN 191
RA++ AIL+ N
Sbjct: 189 RAKASAILSASN 200
>gi|330445267|ref|ZP_08308919.1| riboflavin biosynthesis protein RibD [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489458|dbj|GAA03416.1| riboflavin biosynthesis protein RibD [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 374
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q AK ++PNP VGCVI + + I+ G+ G HAE+ AL A G
Sbjct: 10 MLRAIQLAKRGRFTTAPNPNVGCVIARGEEIVGEGFHYRAGEPHAEVFALKQA---GTLA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALIKSGI KVI A+ DPNP+V+G+GV L AGI V+
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAEALIKSGISKVICAMVDPNPMVAGRGVEMLQKAGIDVQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA +N+GF M + +P+V +K+ASSLD KT+L N S+WIT +R D
Sbjct: 127 VGLLEEEAQALNLGFIKSMTKKMPFVELKLASSLDGKTALANGESKWITGPCARADVQRH 186
Query: 180 RARSCAILT 188
RAR+ AIL+
Sbjct: 187 RARAGAILS 195
>gi|82542902|ref|YP_406849.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Shigella boydii Sb227]
gi|416296109|ref|ZP_11651315.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Shigella flexneri CDC 796-83]
gi|417680553|ref|ZP_12329938.1| riboflavin biosynthesis protein RibD [Shigella boydii 3594-74]
gi|420324019|ref|ZP_14825805.1| riboflavin biosynthesis protein RibD [Shigella flexneri CCH060]
gi|420351182|ref|ZP_14852381.1| riboflavin biosynthesis protein RibD [Shigella boydii 4444-74]
gi|81244313|gb|ABB65021.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Shigella boydii Sb227]
gi|320186043|gb|EFW60788.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Shigella flexneri CDC 796-83]
gi|332098511|gb|EGJ03477.1| riboflavin biosynthesis protein RibD [Shigella boydii 3594-74]
gi|391256909|gb|EIQ16031.1| riboflavin biosynthesis protein RibD [Shigella flexneri CCH060]
gi|391289037|gb|EIQ47533.1| riboflavin biosynthesis protein RibD [Shigella boydii 4444-74]
Length = 367
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|421725263|ref|ZP_16164459.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella oxytoca M5al]
gi|410373924|gb|EKP28609.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella oxytoca M5al]
Length = 367
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L G+ V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGVDVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PW+++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|423101575|ref|ZP_17089277.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5242]
gi|376391363|gb|EHT04042.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5242]
Length = 367
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ +I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGQIVGEGFHYRAGEPHAEVHALRMA---GEKAKGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L G+ V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGVDVGHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PW+++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|378953127|ref|YP_005210615.1| protein RibD [Pseudomonas fluorescens F113]
gi|359763141|gb|AEV65220.1| RibD [Pseudomonas fluorescens F113]
Length = 377
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNPRVGCVIV+E +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARRGHYTTHPNPRVGCVIVREGQIVGEGWHIRAGEPHAEVHALRAA---GEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGAAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|395498963|ref|ZP_10430542.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. PAMC 25886]
Length = 378
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +++ G+ G HAE+ AL A G
Sbjct: 16 MARALELARKGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHAEVHAL---RAAGDKA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G+TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI
Sbjct: 73 RGATAYVTLEPCSHHGHTPPCADALVNAGLARVVAAMQDPNPEVAGRGMRRLAQAGIETH 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF RM+ G+P+VR+K+A SLD +T++ N SQWIT +R
Sbjct: 133 SGLLENEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMANGESQWITGPAARAAVQRL 192
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 193 RAQASVVLTGAD 204
>gi|395797717|ref|ZP_10477005.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. Ag1]
gi|421139018|ref|ZP_15599064.1| riboflavin synthase subunit alpha [Pseudomonas fluorescens BBc6R8]
gi|395338085|gb|EJF69938.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. Ag1]
gi|404509741|gb|EKA23665.1| riboflavin synthase subunit alpha [Pseudomonas fluorescens BBc6R8]
Length = 378
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +++ G+ G HAE+ AL A G
Sbjct: 16 MARALELARKGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHAEVHAL---RAAGDKA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G+TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI
Sbjct: 73 RGATAYVTLEPCSHHGHTPPCADALVNAGLARVVAAMQDPNPEVAGRGMRRLAQAGIETH 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF RM+ G+P+VR+K+A SLD +T++ N SQWIT +R
Sbjct: 133 SGLLENEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMANGESQWITGPAARAAVQRL 192
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 193 RAQASVVLTGAD 204
>gi|397656292|ref|YP_006496994.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
oxytoca E718]
gi|394344901|gb|AFN31022.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
oxytoca E718]
Length = 367
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ +I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGQIVGEGFHYRAGEPHAEVHALRMA---GEKAKGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L G+ V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCEALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQEGVDVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PW+++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|416273502|ref|ZP_11643417.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Shigella dysenteriae CDC 74-1112]
gi|320173768|gb|EFW48951.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Shigella dysenteriae CDC 74-1112]
Length = 367
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|308185884|ref|YP_003930015.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Pantoea vagans C9-1]
gi|308056394|gb|ADO08566.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Pantoea vagans C9-1]
Length = 366
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIV++ ++ G+ + G HAE+ AL A G
Sbjct: 6 MARALELARRGRFTTMPNPNVGCVIVRDGEVVGEGWHQRAGEPHAEVHALRMA---GEKA 62
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 63 RGATAYVTLEPCSHHGRTPPCCDALIAAGVIRVVAAMQDPNPQVAGRGLHRLHQAGIDVS 122
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS+ +R D
Sbjct: 123 HGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSEAARRDVQRL 182
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 183 RAQSAAILS 191
>gi|425303916|ref|ZP_18693705.1| riboflavin biosynthesis protein RibD [Escherichia coli N1]
gi|408232168|gb|EKI55419.1| riboflavin biosynthesis protein RibD [Escherichia coli N1]
Length = 367
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|398886460|ref|ZP_10641337.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM60]
gi|398189775|gb|EJM77041.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM60]
Length = 377
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIVK+ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVKDGQIVGEGWHERTGEPHAEVHAL---RAAGDKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+++
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGLARVVAAMQDPNPSVAGRGMQRLAQAGIAIE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|187734040|ref|YP_001879123.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Shigella boydii CDC 3083-94]
gi|421681114|ref|ZP_16120944.1| riboflavin biosynthesis protein RibD [Shigella flexneri 1485-80]
gi|187431032|gb|ACD10306.1| riboflavin biosynthesis protein RibD [Shigella boydii CDC 3083-94]
gi|404341862|gb|EJZ68264.1| riboflavin biosynthesis protein RibD [Shigella flexneri 1485-80]
Length = 367
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|432748867|ref|ZP_19983490.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE29]
gi|431300605|gb|ELF90156.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE29]
Length = 367
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|420334580|ref|ZP_14836202.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-315]
gi|420378671|ref|ZP_14878170.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 225-75]
gi|391268271|gb|EIQ27199.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-315]
gi|391306904|gb|EIQ64652.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 225-75]
Length = 361
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|58583479|ref|YP_202495.1| bifunctional riboflavin-specific deaminase/5-amino-6-uracil
reductase [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84625292|ref|YP_452664.1| riboflavin-specific deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575264|ref|YP_001912193.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58428073|gb|AAW77110.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase
[Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84369232|dbj|BAE70390.1| riboflavin-specific deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519716|gb|ACD57661.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 369
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGFALLRDAGIEVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT ++R D W
Sbjct: 133 SGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGQSKWITGADARADVQRW 192
Query: 180 RARSCAILTGKN 191
RAR+ AILTG
Sbjct: 193 RARAGAILTGAG 204
>gi|402843256|ref|ZP_10891658.1| riboflavin biosynthesis protein RibD [Klebsiella sp. OBRC7]
gi|402277887|gb|EJU26955.1| riboflavin biosynthesis protein RibD [Klebsiella sp. OBRC7]
Length = 361
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ +I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 9 ARGRFTTHPNPNVGCVIVKDGQIVGEGFHYRAGEPHAEVHALRMA---GEKAKGATAYVT 65
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L G+ V GLM EA
Sbjct: 66 LEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGVDVGHGLMMNEA 125
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PW+++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 126 EALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 185
Query: 188 T 188
T
Sbjct: 186 T 186
>gi|407790855|ref|ZP_11137946.1| riboflavin biosynthesis protein RibD [Gallaecimonas xiamenensis
3-C-1]
gi|407202402|gb|EKE72394.1| riboflavin biosynthesis protein RibD [Gallaecimonas xiamenensis
3-C-1]
Length = 356
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIVK ++ G+ + G HAE+ AL N A G +T Y+TLEPC+
Sbjct: 20 TTEPNPAVGCVIVKNGELVGEGWHQQAGTAHAEVHAL-NMA--GERARGATAYVTLEPCA 76
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC EAL+K+G+ KVI A+ DPNP V+GKG+ L AGI+ + GL++ +A +N
Sbjct: 77 HYGRTPPCAEALVKAGVAKVIAAMVDPNPQVAGKGLKILEDAGIATQHGLLEADARALNP 136
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF +M+ G+P VRMK+A+SLD +T+L N S+WIT ++R D RA S AI+TG
Sbjct: 137 GFIKKMETGLPLVRMKLAASLDGRTALKNGQSKWITGPDARADVQRLRAMSGAIITG 193
>gi|432453259|ref|ZP_19695499.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE193]
gi|433031849|ref|ZP_20219664.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE112]
gi|430974601|gb|ELC91524.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE193]
gi|431560156|gb|ELI33677.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE112]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|300721779|ref|YP_003711057.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Xenorhabdus nematophila ATCC 19061]
gi|297628274|emb|CBJ88835.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase [Xenorhabdus nematophila ATCC 19061]
Length = 369
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A + +SPNP VGCVIVK++ I+ G+ G HAE+ AL A G
Sbjct: 9 MSRALELAYQGRFTTSPNPNVGCVIVKDEEIVGEGFHLRAGEPHAEVHALRMA---GEKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V++A+ DPNP V+G+G+ +L AGI+V+
Sbjct: 66 KGATAYVTLEPCSHHGKTPPCADALIAAGLSRVVVAMQDPNPQVAGRGLYKLQQAGIAVE 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +A +N GF RM+ G P++++K+ SSLD +T+L + SQWITS ++R D
Sbjct: 126 HGLMMDQAESLNKGFLKRMRTGFPYLQLKLGSSLDGRTALSSGESQWITSPQARQDVQTL 185
Query: 180 RARSCAILT 188
RA+ AIL+
Sbjct: 186 RAQCSAILS 194
>gi|218693874|ref|YP_002401541.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 55989]
gi|407467860|ref|YP_006785698.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407483409|ref|YP_006780558.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483963|ref|YP_006771509.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417153085|ref|ZP_11991876.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.0497]
gi|417579634|ref|ZP_12230456.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_B2F1]
gi|417665496|ref|ZP_12315063.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_O31]
gi|417803766|ref|ZP_12450801.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. LB226692]
gi|417831518|ref|ZP_12478040.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 01-09591]
gi|417867715|ref|ZP_12512750.1| hypothetical protein C22711_4641 [Escherichia coli O104:H4 str.
C227-11]
gi|422991127|ref|ZP_16981898.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
C227-11]
gi|422993066|ref|ZP_16983830.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
C236-11]
gi|422998277|ref|ZP_16989033.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
09-7901]
gi|423006738|ref|ZP_16997481.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
04-8351]
gi|423008381|ref|ZP_16999119.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-3677]
gi|423022568|ref|ZP_17013271.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4404]
gi|423027722|ref|ZP_17018415.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4522]
gi|423033559|ref|ZP_17024243.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4623]
gi|423036425|ref|ZP_17027099.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041545|ref|ZP_17032212.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423048231|ref|ZP_17038888.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423051815|ref|ZP_17040623.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058780|ref|ZP_17047576.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C5]
gi|429722607|ref|ZP_19257505.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774704|ref|ZP_19306707.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02030]
gi|429779967|ref|ZP_19311920.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784019|ref|ZP_19315932.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02092]
gi|429789357|ref|ZP_19321232.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02093]
gi|429795587|ref|ZP_19327413.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02281]
gi|429801513|ref|ZP_19333291.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02318]
gi|429805145|ref|ZP_19336892.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02913]
gi|429809956|ref|ZP_19341658.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-03439]
gi|429815716|ref|ZP_19347375.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-04080]
gi|429821304|ref|ZP_19352917.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-03943]
gi|429906978|ref|ZP_19372947.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429911176|ref|ZP_19377132.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917012|ref|ZP_19382952.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429922050|ref|ZP_19387971.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927868|ref|ZP_19393774.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429931800|ref|ZP_19397695.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429933402|ref|ZP_19399292.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429939056|ref|ZP_19404930.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946699|ref|ZP_19412554.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949331|ref|ZP_19415179.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957615|ref|ZP_19423444.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec12-0466]
gi|218350606|emb|CAU96298.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli 55989]
gi|340735670|gb|EGR64726.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 01-09591]
gi|340741475|gb|EGR75621.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. LB226692]
gi|341921004|gb|EGT70608.1| hypothetical protein C22711_4641 [Escherichia coli O104:H4 str.
C227-11]
gi|345344054|gb|EGW76430.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_B2F1]
gi|354858237|gb|EHF18688.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
04-8351]
gi|354860113|gb|EHF20560.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
C227-11]
gi|354866809|gb|EHF27232.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
C236-11]
gi|354877145|gb|EHF37505.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
09-7901]
gi|354879452|gb|EHF39790.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4404]
gi|354884039|gb|EHF44353.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-3677]
gi|354885840|gb|EHF46132.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4522]
gi|354888907|gb|EHF49161.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4623]
gi|354901508|gb|EHF61635.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354905739|gb|EHF65822.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354908246|gb|EHF68302.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354918718|gb|EHF78674.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354922406|gb|EHF82321.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C4]
gi|386169809|gb|EIH36317.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.0497]
gi|397786893|gb|EJK97724.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_O31]
gi|406779125|gb|AFS58549.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407055706|gb|AFS75757.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063895|gb|AFS84942.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429351520|gb|EKY88240.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02030]
gi|429352223|gb|EKY88939.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02033-1]
gi|429352981|gb|EKY89690.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02092]
gi|429366894|gb|EKZ03495.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02093]
gi|429367805|gb|EKZ04397.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02281]
gi|429370300|gb|EKZ06866.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02318]
gi|429382687|gb|EKZ19151.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02913]
gi|429384920|gb|EKZ21374.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-03943]
gi|429385443|gb|EKZ21896.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-03439]
gi|429397136|gb|EKZ33483.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-04080]
gi|429399364|gb|EKZ35685.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429399672|gb|EKZ35992.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429410426|gb|EKZ46648.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429412326|gb|EKZ48523.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429419311|gb|EKZ55449.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429427870|gb|EKZ63950.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429434714|gb|EKZ70738.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429435538|gb|EKZ71556.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429440079|gb|EKZ76058.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429444679|gb|EKZ80624.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429450984|gb|EKZ86876.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456476|gb|EKZ92321.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9941]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|419805599|ref|ZP_14330731.1| riboflavin biosynthesis protein RibD [Escherichia coli AI27]
gi|384471421|gb|EIE55500.1| riboflavin biosynthesis protein RibD [Escherichia coli AI27]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|419344058|ref|ZP_13885442.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13A]
gi|419348491|ref|ZP_13889844.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13B]
gi|419928028|ref|ZP_14445748.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 541-1]
gi|378190557|gb|EHX51141.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13A]
gi|378204153|gb|EHX64569.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13B]
gi|388406279|gb|EIL66685.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 541-1]
Length = 361
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|415821067|ref|ZP_11510081.1| riboflavin biosynthesis protein RibD [Escherichia coli OK1180]
gi|417637713|ref|ZP_12287888.1| riboflavin biosynthesis protein RibD [Escherichia coli TX1999]
gi|419379296|ref|ZP_13920277.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14C]
gi|419948951|ref|ZP_14465214.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli CUMT8]
gi|323178323|gb|EFZ63901.1| riboflavin biosynthesis protein RibD [Escherichia coli OK1180]
gi|345395457|gb|EGX25201.1| riboflavin biosynthesis protein RibD [Escherichia coli TX1999]
gi|378234441|gb|EHX94519.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14C]
gi|388420483|gb|EIL80175.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli CUMT8]
Length = 361
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|419384553|ref|ZP_13925457.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14D]
gi|378237131|gb|EHX97158.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14D]
Length = 355
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|71282342|ref|YP_267480.1| riboflavin biosynthesis protein RibD [Colwellia psychrerythraea
34H]
gi|71148082|gb|AAZ28555.1| riboflavin biosynthesis protein RibD [Colwellia psychrerythraea
34H]
Length = 389
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 131/197 (66%), Gaps = 6/197 (3%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEK----RIISCGYTKSPGGNHAEIDALLNAAAQ 55
M+ A+ AK +SPNPRVGCV+V K ++I GY + G HAE++AL A
Sbjct: 1 MSRAIDLAKKGHFTTSPNPRVGCVLVSYKEGVGKVIGEGYHQKAGQGHAEVNALAEAKVN 60
Query: 56 GYD-VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISA 114
+ +T Y+TLEPCS+FG TPPC +AL+ +G+ VI A+ DPNP VSG G++ L A
Sbjct: 61 NPALIKGATAYVTLEPCSHFGRTPPCAKALVDAGVSHVIAAMVDPNPQVSGNGLSLLEKA 120
Query: 115 GISVKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRN 174
GI+V+ GL+++ A +N+GF +M +P+VR K+A+SLD KT++ + S+WITS ++R
Sbjct: 121 GITVQSGLLEQSARLLNVGFIHKMVNNLPYVRCKLAASLDGKTAMASGESKWITSADARQ 180
Query: 175 DSHIWRARSCAILTGKN 191
D RA+SCAI+TG +
Sbjct: 181 DVQRLRAQSCAIITGAD 197
>gi|375259310|ref|YP_005018480.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella oxytoca KCTC 1686]
gi|365908788|gb|AEX04241.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella oxytoca KCTC 1686]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ +I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGQIVGEGFHYRAGEPHAEVHALRMA---GEKAKGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L G+ V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCEALIAAGVTRVVAAMQDPNPQVAGRGLYRLQKEGVDVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PW+++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|157159935|ref|YP_001457253.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli HS]
gi|419353393|ref|ZP_13894679.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13C]
gi|419358737|ref|ZP_13899968.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13D]
gi|419363651|ref|ZP_13904833.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13E]
gi|157065615|gb|ABV04870.1| riboflavin biosynthesis protein RibD [Escherichia coli HS]
gi|378208302|gb|EHX68686.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13D]
gi|378209310|gb|EHX69684.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13C]
gi|378219671|gb|EHX79938.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13E]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|193068693|ref|ZP_03049654.1| riboflavin biosynthesis protein RibD [Escherichia coli E110019]
gi|209917627|ref|YP_002291711.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli SE11]
gi|218552977|ref|YP_002385890.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli IAI1]
gi|260853634|ref|YP_003227525.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. 11368]
gi|260866572|ref|YP_003232974.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O111:H- str. 11128]
gi|293418481|ref|ZP_06660916.1| riboflavin biosynthesis protein RibD [Escherichia coli B088]
gi|300820347|ref|ZP_07100499.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 119-7]
gi|300903321|ref|ZP_07121249.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 84-1]
gi|301301562|ref|ZP_07207697.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 124-1]
gi|331666763|ref|ZP_08367637.1| riboflavin biosynthesis protein RibD [Escherichia coli TA271]
gi|415793719|ref|ZP_11496263.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa14]
gi|415828345|ref|ZP_11514942.1| riboflavin biosynthesis protein RibD [Escherichia coli OK1357]
gi|415862689|ref|ZP_11536129.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 85-1]
gi|417135393|ref|ZP_11980178.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.0588]
gi|417190625|ref|ZP_12013221.1| riboflavin biosynthesis protein RibD [Escherichia coli 4.0522]
gi|417218265|ref|ZP_12023867.1| riboflavin biosynthesis protein RibD [Escherichia coli JB1-95]
gi|417268198|ref|ZP_12055559.1| riboflavin biosynthesis protein RibD [Escherichia coli 3.3884]
gi|417299421|ref|ZP_12086651.1| riboflavin biosynthesis protein RibD [Escherichia coli 900105
(10e)]
gi|417590091|ref|ZP_12240811.1| riboflavin biosynthesis protein RibD [Escherichia coli 2534-86]
gi|417595333|ref|ZP_12246003.1| riboflavin biosynthesis protein RibD [Escherichia coli 3030-1]
gi|417606401|ref|ZP_12256930.1| riboflavin biosynthesis protein RibD [Escherichia coli
STEC_DG131-3]
gi|418941163|ref|ZP_13494500.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O157:H43 str. T22]
gi|419168408|ref|ZP_13712806.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7A]
gi|419179402|ref|ZP_13723027.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7C]
gi|419184959|ref|ZP_13728481.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7D]
gi|419190207|ref|ZP_13733675.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7E]
gi|419195506|ref|ZP_13738914.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8A]
gi|419201533|ref|ZP_13744761.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8B]
gi|419207409|ref|ZP_13750537.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8C]
gi|419213849|ref|ZP_13756881.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8D]
gi|419219674|ref|ZP_13762631.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8E]
gi|419225134|ref|ZP_13768024.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9A]
gi|419230923|ref|ZP_13773715.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9B]
gi|419236256|ref|ZP_13779007.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9C]
gi|419241849|ref|ZP_13784499.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9D]
gi|419247255|ref|ZP_13789871.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9E]
gi|419253035|ref|ZP_13795585.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10A]
gi|419259044|ref|ZP_13801504.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10B]
gi|419265044|ref|ZP_13807431.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10C]
gi|419270732|ref|ZP_13813065.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10D]
gi|419276531|ref|ZP_13818801.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10E]
gi|419282132|ref|ZP_13824354.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10F]
gi|419368696|ref|ZP_13909825.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14A]
gi|419389827|ref|ZP_13930666.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15A]
gi|419394999|ref|ZP_13935784.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15B]
gi|419400350|ref|ZP_13941084.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15C]
gi|419405521|ref|ZP_13946225.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15D]
gi|419876942|ref|ZP_14398601.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9534]
gi|419882631|ref|ZP_14403841.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9545]
gi|419888469|ref|ZP_14408976.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9570]
gi|419893064|ref|ZP_14413070.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9574]
gi|419900620|ref|ZP_14420046.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM9942]
gi|419908313|ref|ZP_14427047.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O26:H11 str. CVM10026]
gi|420088229|ref|ZP_14600133.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9602]
gi|420092961|ref|ZP_14604651.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9634]
gi|420103091|ref|ZP_14614005.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9455]
gi|420109720|ref|ZP_14619820.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9553]
gi|420113401|ref|ZP_14623144.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10021]
gi|420119613|ref|ZP_14628878.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10030]
gi|420125690|ref|ZP_14634481.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10224]
gi|420130801|ref|ZP_14639281.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM9952]
gi|420384051|ref|ZP_14883439.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa12]
gi|422355359|ref|ZP_16436075.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 117-3]
gi|422777107|ref|ZP_16830760.1| riboflavin biosynthesis protein RibD [Escherichia coli H120]
gi|423710182|ref|ZP_17684532.1| riboflavin biosynthesis protein RibD [Escherichia coli B799]
gi|424747956|ref|ZP_18176108.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424766711|ref|ZP_18194056.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CFSAN001630]
gi|424768129|ref|ZP_18195421.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CFSAN001632]
gi|425377229|ref|ZP_18761631.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1865]
gi|427803480|ref|ZP_18970547.1| bifunctional pyrimidine deaminase/reductase [Escherichia coli
chi7122]
gi|427808098|ref|ZP_18975163.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Escherichia coli]
gi|432375494|ref|ZP_19618508.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE12]
gi|432479775|ref|ZP_19721740.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE210]
gi|432678003|ref|ZP_19913430.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE142]
gi|432763702|ref|ZP_19998154.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE48]
gi|432830399|ref|ZP_20064008.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE135]
gi|432833467|ref|ZP_20067015.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE136]
gi|432966521|ref|ZP_20155441.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE203]
gi|433090735|ref|ZP_20277043.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE138]
gi|433128742|ref|ZP_20314222.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE163]
gi|433133562|ref|ZP_20318945.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE166]
gi|443616439|ref|YP_007380295.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli APEC O78]
gi|192958056|gb|EDV88498.1| riboflavin biosynthesis protein RibD [Escherichia coli E110019]
gi|209910886|dbj|BAG75960.1| pyrimidine deaminase/reductase [Escherichia coli SE11]
gi|218359745|emb|CAQ97286.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli IAI1]
gi|257752283|dbj|BAI23785.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O26:H11 str. 11368]
gi|257762928|dbj|BAI34423.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O111:H- str. 11128]
gi|291325009|gb|EFE64424.1| riboflavin biosynthesis protein RibD [Escherichia coli B088]
gi|300404616|gb|EFJ88154.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 84-1]
gi|300527132|gb|EFK48201.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 119-7]
gi|300843059|gb|EFK70819.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 124-1]
gi|315256239|gb|EFU36207.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 85-1]
gi|323152118|gb|EFZ38411.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa14]
gi|323184760|gb|EFZ70131.1| riboflavin biosynthesis protein RibD [Escherichia coli OK1357]
gi|323945315|gb|EGB41371.1| riboflavin biosynthesis protein RibD [Escherichia coli H120]
gi|324016680|gb|EGB85899.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 117-3]
gi|331065987|gb|EGI37871.1| riboflavin biosynthesis protein RibD [Escherichia coli TA271]
gi|345345264|gb|EGW77610.1| riboflavin biosynthesis protein RibD [Escherichia coli 2534-86]
gi|345361701|gb|EGW93859.1| riboflavin biosynthesis protein RibD [Escherichia coli 3030-1]
gi|345365615|gb|EGW97722.1| riboflavin biosynthesis protein RibD [Escherichia coli
STEC_DG131-3]
gi|375323522|gb|EHS69230.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O157:H43 str. T22]
gi|378018814|gb|EHV81660.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7A]
gi|378027863|gb|EHV90488.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7C]
gi|378032377|gb|EHV94958.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7D]
gi|378042310|gb|EHW04759.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7E]
gi|378052727|gb|EHW15029.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8A]
gi|378057127|gb|EHW19362.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8B]
gi|378063065|gb|EHW25235.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8C]
gi|378069160|gb|EHW31255.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8D]
gi|378072728|gb|EHW34785.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8E]
gi|378081836|gb|EHW43784.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9A]
gi|378082751|gb|EHW44694.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9B]
gi|378090478|gb|EHW52315.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9C]
gi|378095172|gb|EHW56962.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9D]
gi|378102736|gb|EHW64409.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9E]
gi|378107871|gb|EHW69489.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10A]
gi|378116893|gb|EHW78411.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10B]
gi|378119279|gb|EHW80774.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10C]
gi|378121677|gb|EHW83128.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10D]
gi|378134720|gb|EHW96041.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10E]
gi|378139955|gb|EHX01185.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10F]
gi|378221902|gb|EHX82144.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14A]
gi|378244629|gb|EHY04571.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15A]
gi|378251851|gb|EHY11747.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15B]
gi|378252181|gb|EHY12075.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15C]
gi|378257910|gb|EHY17746.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15D]
gi|385704830|gb|EIG41902.1| riboflavin biosynthesis protein RibD [Escherichia coli B799]
gi|386153247|gb|EIH04536.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.0588]
gi|386191597|gb|EIH80338.1| riboflavin biosynthesis protein RibD [Escherichia coli 4.0522]
gi|386193148|gb|EIH87447.1| riboflavin biosynthesis protein RibD [Escherichia coli JB1-95]
gi|386230556|gb|EII57911.1| riboflavin biosynthesis protein RibD [Escherichia coli 3.3884]
gi|386257213|gb|EIJ12704.1| riboflavin biosynthesis protein RibD [Escherichia coli 900105
(10e)]
gi|388341925|gb|EIL08002.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9534]
gi|388360339|gb|EIL24560.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9570]
gi|388361261|gb|EIL25395.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9545]
gi|388368648|gb|EIL32273.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9574]
gi|388375267|gb|EIL38293.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O26:H11 str. CVM10026]
gi|388377661|gb|EIL40456.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM9942]
gi|391309560|gb|EIQ67228.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa12]
gi|394390740|gb|EJE67700.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9602]
gi|394394587|gb|EJE71150.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10224]
gi|394399966|gb|EJE75927.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9634]
gi|394405910|gb|EJE81007.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9553]
gi|394409081|gb|EJE83668.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9455]
gi|394412020|gb|EJE86200.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10021]
gi|394431075|gb|EJF03318.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10030]
gi|394433338|gb|EJF05370.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM9952]
gi|408310063|gb|EKJ27147.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1865]
gi|412961662|emb|CCK45569.1| bifunctional pyrimidine deaminase/reductase [Escherichia coli
chi7122]
gi|412968277|emb|CCJ42894.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Escherichia coli]
gi|421934177|gb|EKT91954.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CFSAN001630]
gi|421945345|gb|EKU02562.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421946767|gb|EKU03881.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CFSAN001632]
gi|430901398|gb|ELC23366.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE12]
gi|431010792|gb|ELD25136.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE210]
gi|431207639|gb|ELF05893.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE142]
gi|431313354|gb|ELG01327.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE48]
gi|431380161|gb|ELG65061.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE135]
gi|431388629|gb|ELG72352.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE136]
gi|431475882|gb|ELH55686.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE203]
gi|431615187|gb|ELI84317.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE138]
gi|431651612|gb|ELJ18851.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE163]
gi|431663377|gb|ELJ30139.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE166]
gi|443420947|gb|AGC85851.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli APEC O78]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|384417824|ref|YP_005627184.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353460738|gb|AEQ95017.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 369
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGFALLRDAGIEVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT ++R D W
Sbjct: 133 SGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGQSKWITGADARADVQRW 192
Query: 180 RARSCAILTGKN 191
RAR+ AILTG
Sbjct: 193 RARAGAILTGAG 204
>gi|350530421|ref|ZP_08909362.1| pyrimidine deaminase [Vibrio rotiferianus DAT722]
Length = 374
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GDKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC E LIK+ + +VI A+ DPNP V+G+G L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHFGRTPPCAEGLIKAKVARVICAMEDPNPKVAGRGFQMLRDAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA ++N GF MQ G+P+V++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLESEAIDLNKGFIKFMQTGMPYVQLKMAASLDGQSALNNGQSQWITSPKARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RALSGGILS 203
>gi|331676081|ref|ZP_08376793.1| riboflavin biosynthesis protein RibD [Escherichia coli H591]
gi|331076139|gb|EGI47421.1| riboflavin biosynthesis protein RibD [Escherichia coli H591]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|307312211|ref|ZP_07591847.1| riboflavin biosynthesis protein RibD [Escherichia coli W]
gi|378714182|ref|YP_005279075.1| riboflavin biosynthesis protein RibD [Escherichia coli KO11FL]
gi|386607774|ref|YP_006123260.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Escherichia coli W]
gi|422763205|ref|ZP_16816960.1| riboflavin biosynthesis protein RibD [Escherichia coli E1167]
gi|306907713|gb|EFN38215.1| riboflavin biosynthesis protein RibD [Escherichia coli W]
gi|315059691|gb|ADT74018.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli W]
gi|323379743|gb|ADX52011.1| riboflavin biosynthesis protein RibD [Escherichia coli KO11FL]
gi|324116898|gb|EGC10811.1| riboflavin biosynthesis protein RibD [Escherichia coli E1167]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|330505155|ref|YP_004382024.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
mendocina NK-01]
gi|328919441|gb|AEB60272.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
mendocina NK-01]
Length = 371
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ I+ G+ G HAE+ AL A G
Sbjct: 9 MARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G G+ +L++AGI V+
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGNGLLRLMNAGIEVR 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K A SLD +T++ + SQWIT +R +
Sbjct: 126 SGVLESEARALNAGFIKRMETGLPFVRVKSAMSLDGRTAMASGESQWITGPAARAEVQRL 185
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 186 RAQSSVVLSGAD 197
>gi|422597937|ref|ZP_16672204.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330988221|gb|EGH86324.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 378
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P++R+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|417230354|ref|ZP_12031940.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.0959]
gi|386206844|gb|EII11350.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.0959]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|335042329|ref|ZP_08535356.1| pyrimidine deaminase [Methylophaga aminisulfidivorans MP]
gi|333788943|gb|EGL54825.1| pyrimidine deaminase [Methylophaga aminisulfidivorans MP]
Length = 368
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK + + PNPRVGCVIVK+ +I+ G+ + G HAE++AL A G
Sbjct: 8 MARAIELAKNGLYTTDPNPRVGCVIVKDNQIVGEGWHQRAGEGHAEVNALHQA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS++G TPPC +AL+ +G+K+V IA+ DPNP+VSG G+ +L AGI V
Sbjct: 65 KGADCYVTLEPCSHYGRTPPCADALVNAGVKRVFIAMTDPNPVVSGSGIHRLREAGIEVH 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
L+ E+ ++N GF RM+ G P++R K+A SLD +T++ + S+WIT ++R D
Sbjct: 125 TKLLSSESEKLNPGFLYRMRYGRPYIRSKVAMSLDGRTAMASGESKWITGPKARLDVQKL 184
Query: 180 RARSCAILTG 189
RARS AI+TG
Sbjct: 185 RARSSAIMTG 194
>gi|238783633|ref|ZP_04627654.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
bercovieri ATCC 43970]
gi|238715511|gb|EEQ07502.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
bercovieri ATCC 43970]
Length = 369
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A++ + PNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARMGRFTTPPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCADALVAAGVIRVVAAMQDPNPQVAGRGLYKLKQAGIAVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N+GF RM+ G P++++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESAAILS 193
>gi|77461240|ref|YP_350747.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
fluorescens Pf0-1]
gi|77385243|gb|ABA76756.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
fluorescens Pf0-1]
Length = 376
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 14 MARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHERAGEPHAEVHAL---RAAGERA 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +GI +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 71 RGATAYVTLEPCSHHGRTPPCADALVNAGIGRVVAAMRDPNPQVAGRGLQRLTDAGIATE 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 131 SGVLEAEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 190
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 191 RAQASVVLTGAD 202
>gi|387605923|ref|YP_006094779.1| riboflavin biosynthesis protein [Escherichia coli 042]
gi|284920223|emb|CBG33282.1| riboflavin biosynthesis protein [Escherichia coli 042]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|191166718|ref|ZP_03028545.1| riboflavin biosynthesis protein RibD [Escherichia coli B7A]
gi|309794861|ref|ZP_07689282.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 145-7]
gi|416341355|ref|ZP_11675978.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Escherichia coli EC4100B]
gi|417223910|ref|ZP_12027201.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.154]
gi|417600691|ref|ZP_12251276.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_94C]
gi|425421023|ref|ZP_18802254.1| riboflavin biosynthesis protein RibD [Escherichia coli 0.1288]
gi|432812523|ref|ZP_20046372.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE101]
gi|190903229|gb|EDV62951.1| riboflavin biosynthesis protein RibD [Escherichia coli B7A]
gi|308121514|gb|EFO58776.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 145-7]
gi|320201655|gb|EFW76231.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Escherichia coli EC4100B]
gi|345354036|gb|EGW86263.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_94C]
gi|386198958|gb|EIH97949.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.154]
gi|408347885|gb|EKJ62028.1| riboflavin biosynthesis protein RibD [Escherichia coli 0.1288]
gi|431357415|gb|ELG44082.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE101]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|417144568|ref|ZP_11986374.1| riboflavin biosynthesis protein RibD [Escherichia coli 1.2264]
gi|386164451|gb|EIH26237.1| riboflavin biosynthesis protein RibD [Escherichia coli 1.2264]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|429089327|ref|ZP_19152059.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter universalis NCTC 9529]
gi|426509130|emb|CCK17171.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter universalis NCTC 9529]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCVIVKE I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPRVGCVIVKEGVIVGEGFHLRAGEPHAEVHALRMA---GDKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 76 SHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAESHAILT 192
>gi|386708213|ref|YP_006171934.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli W]
gi|383403905|gb|AFH10148.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli W]
Length = 361
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|71735090|ref|YP_276623.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|416018829|ref|ZP_11565757.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. B076]
gi|416024440|ref|ZP_11568501.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422403477|ref|ZP_16480535.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. race 4]
gi|71555643|gb|AAZ34854.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322801|gb|EFW78894.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330413|gb|EFW86392.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330874037|gb|EGH08186.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 378
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P++R+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|421503874|ref|ZP_15950819.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas mendocina DLHK]
gi|400345378|gb|EJO93743.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas mendocina DLHK]
Length = 371
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ I+ G+ G HAE+ AL A G
Sbjct: 9 MARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQA---GERA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L +AGI V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCADALVAAGVGRVVAAMQDPNPQVAGRGLLRLANAGIEVL 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N+GF RM+ G+P+VR+K A SLD +T++ + SQWIT +R +
Sbjct: 126 SGVLEAEARALNVGFIKRMESGLPFVRVKSAMSLDGRTAMASGESQWITGPAARAEVQRL 185
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 186 RAQSSVVLSGAD 197
>gi|389841971|ref|YP_006344055.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii ES15]
gi|387852447|gb|AFK00545.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii ES15]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCVIVKE I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPRVGCVIVKEGVIVGEGFHLRAGEPHAEVHALRMA---GDKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 76 SHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAESHAILT 192
>gi|254787586|ref|YP_003075015.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae
T7901]
gi|237683563|gb|ACR10827.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae
T7901]
Length = 363
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 128/190 (67%), Gaps = 2/190 (1%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ +N++ PNPRVGCV+VK+ +I GY G HAE++AL + +
Sbjct: 11 MQQALRLAEEGLNTTTPNPRVGCVLVKDGVVIGEGYHHRAGEPHAEVNAL-KSVIDRQQL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC +AL+ +GI +++ A+ DPNPLV+G+G+ +L AG+ V
Sbjct: 70 AGATAYVTLEPCSHTGKTGPCADALVDAGIGRLVYAMEDPNPLVAGRGLDKLQRAGVVVD 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
L+++EA +N+GF RM+ G+P VR K+A SLD +T++ + S+WIT +R D
Sbjct: 130 GPLLEEEALSLNLGFVKRMRTGLPLVRCKLAMSLDGRTAMRSGESKWITGPSARADVQKL 189
Query: 180 RARSCAILTG 189
RARSCAI+TG
Sbjct: 190 RARSCAIITG 199
>gi|417168693|ref|ZP_12001144.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.0741]
gi|386170741|gb|EIH42794.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.0741]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|269962351|ref|ZP_06176701.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
harveyi 1DA3]
gi|269832847|gb|EEZ86956.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
harveyi 1DA3]
Length = 374
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GDKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF MQ G+P+V++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLENEAIELNKGFIKFMQTGMPYVQLKMAASLDGQSALSNGQSQWITSPKARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RALSGGILS 203
>gi|429122514|ref|ZP_19183091.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter sakazakii 680]
gi|426322982|emb|CCK13828.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter sakazakii 680]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCVIVKE I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPRVGCVIVKEGVIVGEGFHLRAGEPHAEVHALRMA---GDKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 76 SHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAESHAILT 192
>gi|329298304|ref|ZP_08255640.1| riboflavin biosynthesis protein RibD [Plautia stali symbiont]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++PNP VGCVIV++ I+ G+ + G HAE+ AL A G
Sbjct: 7 MARALELARRGQYTTTPNPNVGCVIVRDGEIVGEGWHQRAGEPHAEVHALRMA---GDHA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 CGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 124 HGLMMNEAEALNRGFLKRMRTSFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQRL 183
Query: 180 RARSCAILT 188
RARS AILT
Sbjct: 184 RARSSAILT 192
>gi|298156564|gb|EFH97660.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 366
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 1 MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQA---GELA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 58 RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPDVSGRGLLRLMNAGIGVQ 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P++R+K+A SLD +T++ + SQWIT E+R+
Sbjct: 118 CGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 177
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 178 RAQSSVVLTGAD 189
>gi|332281560|ref|ZP_08393973.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shigella sp. D9]
gi|332103912|gb|EGJ07258.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shigella sp. D9]
Length = 367
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|325928452|ref|ZP_08189643.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
perforans 91-118]
gi|325541169|gb|EGD12720.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
perforans 91-118]
Length = 369
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI +G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGFALLREAGIEVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT +R D W
Sbjct: 133 SGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITGSRARADGQRW 192
Query: 180 RARSCAILTGKN 191
RAR+ AILTG
Sbjct: 193 RARAGAILTGAG 204
>gi|167031576|ref|YP_001666807.1| riboflavin biosynthesis protein RibD [Pseudomonas putida GB-1]
gi|166858064|gb|ABY96471.1| riboflavin biosynthesis protein RibD [Pseudomonas putida GB-1]
Length = 376
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 IGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLQRLAEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLETEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|153845346|ref|ZP_01993762.1| riboflavin biosynthesis protein RibD, partial [Vibrio
parahaemolyticus AQ3810]
gi|149745121|gb|EDM56372.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AQ3810]
Length = 280
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+ I ++PNP VGCVIV++ I+ GY G HAE+ A+ A G
Sbjct: 18 MSRALKLARRGIYTTAPNPNVGCVIVRDGVIVGEGYHHRAGEPHAEVHAMRMA---GDKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQCY 194
Query: 180 RARSCAILT 188
RA+S IL+
Sbjct: 195 RAQSGGILS 203
>gi|417951321|ref|ZP_12594427.1| riboflavin biosynthesis protein RibD [Vibrio splendidus ATCC 33789]
gi|342804986|gb|EGU40268.1| riboflavin biosynthesis protein RibD [Vibrio splendidus ATCC 33789]
Length = 370
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 130/190 (68%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M+ A+ AK I ++PNP VGCVIV+ + +I+ G+ G HAE+ A+ A G
Sbjct: 12 MSRAIHLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMA---GDK 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+TVY+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI V
Sbjct: 69 AKGATVYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDAGIEV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ GL++++A ++N F RMQ G+P+V++K+A+SLD +T+L N SQWITS +R D
Sbjct: 129 EIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSPAARRDVQN 188
Query: 179 WRARSCAILT 188
+RA++ A+L+
Sbjct: 189 YRAKAGAVLS 198
>gi|261856455|ref|YP_003263738.1| riboflavin biosynthesis protein RibD [Halothiobacillus neapolitanus
c2]
gi|261836924|gb|ACX96691.1| riboflavin biosynthesis protein RibD [Halothiobacillus neapolitanus
c2]
Length = 386
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 3 LALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNS 62
LAL + L+ + PNPRVGCVIV ++ G+ GG HAE+ AL A G +
Sbjct: 22 LALAERGLT-TTQPNPRVGCVIVNAGEVVGRGFHALAGGPHAEVFALQEA---GERAKGA 77
Query: 63 TVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGL 122
T Y+TLEPC++ G TP C L +G+++V+ A+ DP+P V+G+G A L +AG+ V+ GL
Sbjct: 78 TAYVTLEPCAHVGRTPACAPQLADAGVRRVVTAMTDPDPRVAGEGHAILRTAGVQVESGL 137
Query: 123 MQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRAR 182
++ EA +N GF SR++RG PWV +KIA SLD +T+L N S+WIT + +R+D RAR
Sbjct: 138 LEAEARWLNRGFLSRIERGRPWVTVKIAQSLDGRTALANGESRWITGEAARHDVQFLRAR 197
Query: 183 SCAILTGKN 191
A+LTG +
Sbjct: 198 HAAVLTGVD 206
>gi|78046354|ref|YP_362529.1| riboflavin biosynthesis diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-[5-phosphoribosylamino]uracil
reductase RibD [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78034784|emb|CAJ22429.1| riboflavin biosynthesis protein RibD
(Diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-[5-phosphoribosylamino]uracil
reductase) [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 369
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI +G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGFALLREAGIEVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT +R D W
Sbjct: 133 SGVMHAQARTLNQGFLSRVERGRPWLRVKLGTSLDGRTALASGESKWITGSHARADGQRW 192
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 193 RARAGAILTG 202
>gi|417120964|ref|ZP_11970418.1| riboflavin biosynthesis protein RibD [Escherichia coli 97.0246]
gi|386148694|gb|EIG95129.1| riboflavin biosynthesis protein RibD [Escherichia coli 97.0246]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|410091034|ref|ZP_11287611.1| riboflavin biosynthesis protein RibD [Pseudomonas viridiflava
UASWS0038]
gi|409761602|gb|EKN46661.1| riboflavin biosynthesis protein RibD [Pseudomonas viridiflava
UASWS0038]
Length = 368
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ +S+ PNPRVGCVI ++ G+ +S GG HAE+ AL A G
Sbjct: 12 MQHALTLAERGSHSTWPNPRVGCVIAHGMHVVGEGWHRSAGGPHAEVFALRQA---GASA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T C +ALI+SGI V++A DP V+G+G+A L AGI VK
Sbjct: 69 RGATAYVTLEPCSHVGRTGACYQALIESGIASVVVAHEDPFEQVNGRGIALLREAGIEVK 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ A E+N GF S ++R PWV++K+ SLD +T+L N SQWI+S ++R D W
Sbjct: 129 VGLLRTAARELNRGFLSSVERQRPWVQLKLGMSLDGRTALKNGRSQWISSPQARADVQFW 188
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 189 RARSAAILTG 198
>gi|398845171|ref|ZP_10602214.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM84]
gi|398253825|gb|EJN38939.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM84]
Length = 376
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGVYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLADAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|300924134|ref|ZP_07140126.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 182-1]
gi|301330725|ref|ZP_07223327.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 78-1]
gi|422960298|ref|ZP_16971746.1| riboflavin biosynthesis protein RibD [Escherichia coli H494]
gi|450211032|ref|ZP_21894171.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O08]
gi|300419587|gb|EFK02898.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 182-1]
gi|300843386|gb|EFK71146.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 78-1]
gi|371594096|gb|EHN82968.1| riboflavin biosynthesis protein RibD [Escherichia coli H494]
gi|449322647|gb|EMD12630.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O08]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D +
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|284006397|emb|CBA71633.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Arsenophonus nasoniae]
Length = 369
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL AK +SPNP VGCVIV++ ++ G+ G HAEI AL A G
Sbjct: 9 MSRALSLAKQGRFTTSPNPNVGCVIVRDGEVVGEGFHCKTGEAHAEIYALQMA---GEKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +ALI +GI++V++A+ DPNP V+G+G+ +L AGI V
Sbjct: 66 NGATAYVTLEPCSHYGKTPPCADALISAGIQRVVVAMQDPNPQVAGRGLLKLQQAGIEVI 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ EA ++N GF RM+ G P+V++K+A+SLD +T+L + S+WITS +R D +
Sbjct: 126 HGLLIDEAEQLNQGFLKRMRTGFPYVQLKLAASLDGRTALASGESKWITSPAARQDVQSF 185
Query: 180 RARSCAILT 188
RA++ AILT
Sbjct: 186 RAQASAILT 194
>gi|432429562|ref|ZP_19672022.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE181]
gi|432639532|ref|ZP_19875377.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE83]
gi|433176859|ref|ZP_20361326.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE82]
gi|430947397|gb|ELC67095.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE181]
gi|431185107|gb|ELE84837.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE83]
gi|431710564|gb|ELJ74938.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE82]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMVSGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|346723675|ref|YP_004850344.1| riboflavin biosynthesis protein RibD [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346648422|gb|AEO41046.1| riboflavin biosynthesis protein RibD [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 369
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 16 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGELA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI +G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 73 RGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGFALLREAGIEVL 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT +R D W
Sbjct: 133 SGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITGSRARADGQRW 192
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 193 RARAGAILTG 202
>gi|289647764|ref|ZP_06479107.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 378
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPDVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P++R+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|407368392|ref|ZP_11114924.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
mandelii JR-1]
Length = 377
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHVRTGEPHAEVHAL---RAAGDKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G+TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+++
Sbjct: 72 RGATAYVTLEPCSHHGHTPPCADALVNAGLARVVAAMQDPNPSVAGRGLQRLAQAGIAIE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|88811147|ref|ZP_01126403.1| riboflavin biosynthesis protein RibD [Nitrococcus mobilis Nb-231]
gi|88791686|gb|EAR22797.1| riboflavin biosynthesis protein RibD [Nitrococcus mobilis Nb-231]
Length = 376
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AK + S+ PNPRVGCVIV+ +++ G+ + G HAEI+AL A
Sbjct: 18 MAHALRLAKRGLFSTGPNPRVGCVIVRNGQLVGEGWHRRAGEPHAEINALAAAGQA---A 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPC + G TPPCT AL+ +GI +VI A DPNP V+G+G+ QL +AGI+ +
Sbjct: 75 RGAILYVTLEPCCHHGRTPPCTTALLSAGITRVIAACKDPNPRVAGQGLEQLTAAGITTR 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM ++A +N GFF RM+ G+P+VR K+A SLD +T++ + S+WIT+ +R D H
Sbjct: 135 HGLMAEQAQTLNPGFFKRMRTGLPYVRCKLAMSLDGRTAMASGESRWITAAAARGDVHRL 194
Query: 180 RARSCAILTG 189
RARS +LTG
Sbjct: 195 RARSDGLLTG 204
>gi|419937136|ref|ZP_14454051.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 576-1]
gi|388398291|gb|EIL59215.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 576-1]
Length = 361
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMVSGESQWITSPQARRDVQRL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|289577285|ref|YP_003475912.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter italicus
Ab9]
gi|289526998|gb|ADD01350.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter italicus
Ab9]
Length = 360
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNP VG VIVK +II GY + GG HAE++AL NA DV ST+++TLEPCS+
Sbjct: 19 TNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVE---DVKGSTMFVTLEPCSH 75
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
+G TPPC E +IKSGIKKV IA+ DPNP VSG G+ +L AGI V G+M+KEA ++N
Sbjct: 76 YGKTPPCVEEIIKSGIKKVYIAMEDPNPKVSGNGIKRLKEAGIEVHVGMMEKEARKLNEI 135
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
FF + P+V +K A S+D K + YN +S+WIT+++SR +H R R AI+ G N
Sbjct: 136 FFKYITTKFPFVILKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRGRVSAIMVGVN 193
>gi|157156281|ref|YP_001461596.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli E24377A]
gi|157078311|gb|ABV18019.1| riboflavin biosynthesis protein RibD [Escherichia coli E24377A]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSYAILT 192
>gi|425276287|ref|ZP_18667631.1| riboflavin biosynthesis protein RibD [Escherichia coli ARS4.2123]
gi|408207199|gb|EKI31953.1| riboflavin biosynthesis protein RibD [Escherichia coli ARS4.2123]
Length = 361
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMTSGESQWITSPQARRDVQRL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|424045133|ref|ZP_17782699.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-03]
gi|408886787|gb|EKM25441.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-03]
Length = 374
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GDKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF MQ G+P+V++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLENEAIELNKGFIKFMQTGMPYVQLKMAASLDGQSALSNGQSQWITSPKARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RALSGGILS 203
>gi|375104917|ref|ZP_09751178.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium
JOSHI_001]
gi|374665648|gb|EHR70433.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium
JOSHI_001]
Length = 380
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 132/191 (69%), Gaps = 4/191 (2%)
Query: 2 TLALQQAKLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
TLAL Q + + S PNPRVGCV+ R+++ G+T+ GG HAE AL A +G +
Sbjct: 14 TLALAQQAIGL-SDPNPRVGCVLADAAGRVVAEGFTQQAGGPHAEAAALAQARERGASLA 72
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV-- 118
T +++LEPC++ G TPPC +AL+ +G+ +V++A DP P V+G+G+A+L +AG+ V
Sbjct: 73 GGTAWVSLEPCAHHGRTPPCADALLAAGLARVVVACEDPFPQVAGQGLARLRAAGVQVLL 132
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ ++A E+NIGFFSR+ RG PWVRMKIA+SLD +T+L N SQWIT + +R D H
Sbjct: 133 ADADLSRQARELNIGFFSRVLRGRPWVRMKIAASLDGRTALSNGQSQWITGEAARTDGHA 192
Query: 179 WRARSCAILTG 189
WR R+ A+LTG
Sbjct: 193 WRKRAGAVLTG 203
>gi|372276409|ref|ZP_09512445.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pantoea sp. SL1_M5]
gi|390435693|ref|ZP_10224231.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pantoea agglomerans IG1]
Length = 366
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIV++ ++ G+ + G HAE+ AL A G
Sbjct: 6 MARALELARRGRFTTMPNPNVGCVIVRDGEVVGEGWHQRAGEPHAEVHALRMA---GEKA 62
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 63 RGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLHRLHQAGIEVS 122
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 123 HGLMMPEAEVLNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSPAARRDVQRL 182
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 183 RAQSAAILS 191
>gi|146308871|ref|YP_001189336.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas mendocina ymp]
gi|145577072|gb|ABP86604.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
mendocina ymp]
Length = 371
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ I+ G+ G HAE+ AL A G
Sbjct: 9 MARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQA---GERA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L +AGI V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCADALVAAGVGRVVAAMQDPNPQVAGRGLLRLANAGIEVL 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N+GF RM+ G+P+VR+K A SLD +T++ + SQWIT +R +
Sbjct: 126 SGVLEAEARALNVGFIKRMESGLPFVRVKSAMSLDGRTAMASGESQWITGPAARAEVQRL 185
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 186 RAQSSVVLSGAD 197
>gi|447918540|ref|YP_007399108.1| riboflavin biosynthesis protein RibD [Pseudomonas poae RE*1-1-14]
gi|445202403|gb|AGE27612.1| riboflavin biosynthesis protein RibD [Pseudomonas poae RE*1-1-14]
Length = 375
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +I+ G+ + G HAE +AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNAL---RAAGSKA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +AL+ +G+ +V+ + DPNP V+G+G+ +L AGI V+
Sbjct: 70 RGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 189
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 190 RAQASVVLTGAD 201
>gi|21230168|ref|NP_636085.1| bifunctional riboflavin-specific deaminase/5-amino-6-uracil
reductase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66769842|ref|YP_244604.1| bifunctional riboflavin-specific deaminase/5-amino-6-uracil
reductase [Xanthomonas campestris pv. campestris str.
8004]
gi|188993059|ref|YP_001905069.1| Riboflavin biosynthesis protein RibD
(Diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-[5-phosphoribosylamino]uracil
reductase) [Xanthomonas campestris pv. campestris str.
B100]
gi|21111703|gb|AAM40009.1| riboflavin-specific deaminase/5-amino-6-uracil reductase
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66575174|gb|AAY50584.1| riboflavin-specific deaminase/5-amino-6-uracil reductase
[Xanthomonas campestris pv. campestris str. 8004]
gi|167734819|emb|CAP53029.1| Riboflavin biosynthesis protein RibD
(Diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-[5-phosphoribosylamino]uracil
reductase) [Xanthomonas campestris pv. campestris]
Length = 364
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ AL A G
Sbjct: 11 MAQALRLAERGAYTTRPNPMVGCVIVRDGACVGEGFHQRAGGPHAEVFAL---RAAGEQA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI +G+ +V+ A+ DP P V+G G L AGI V
Sbjct: 68 RGATAYVTLEPCAHYGRTPPCALALIAAGVTRVVAAMADPFPQVNGGGFTLLRDAGIQVH 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M+ +A +N GF SR++RG PWVR+K+ +SLD +T++ + S+WIT ++R D W
Sbjct: 128 SGVMEAQARALNQGFLSRVERGRPWVRVKLGASLDGRTAMASGESKWITGADARADVQRW 187
Query: 180 RARSCAILTGKN 191
RAR+ ILTG
Sbjct: 188 RARAGVILTGAG 199
>gi|422683152|ref|ZP_16741414.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|331012488|gb|EGH92544.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 249
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP VSG+G+ +L++AGI V+
Sbjct: 70 RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G P++R+K+A SLD +T++ + SQWIT E+R+
Sbjct: 130 CGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQRL 189
Query: 180 RARSCAILTGKN 191
RA+S +LTG +
Sbjct: 190 RAQSSVVLTGAD 201
>gi|374334970|ref|YP_005091657.1| riboflavin biosynthesis protein RibD [Oceanimonas sp. GK1]
gi|372984657|gb|AEY00907.1| riboflavin biosynthesis protein RibD [Oceanimonas sp. GK1]
Length = 371
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ +SPNP VGCV+VK+ ++ G+ + GG HAE+ AL A A
Sbjct: 10 MARALELARRGRFTTSPNPAVGCVVVKDGNLVGEGFHQRAGGPHAEVFALREAGAA---A 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC + LI +G+ +V+ A+ DPNP V+G+G+A L AGI +
Sbjct: 67 QGATAYVTLEPCSHHGRTPPCAQGLIDAGVTRVVAAMVDPNPRVAGRGLAMLREAGIQAE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM + A +N+GF RM+ G P+V +K+A+SLD +T+L N SQWIT +R D
Sbjct: 127 AGLMSEAAEAVNVGFLHRMRTGRPFVTLKLAASLDGRTALANGESQWITGPAARRDVQRH 186
Query: 180 RARSCAILTGKN 191
RA+SCA+L+G +
Sbjct: 187 RAQSCALLSGAD 198
>gi|148976617|ref|ZP_01813304.1| riboflavin-specific deaminase [Vibrionales bacterium SWAT-3]
gi|145963968|gb|EDK29226.1| riboflavin-specific deaminase [Vibrionales bacterium SWAT-3]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 130/190 (68%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M+ A+ AK I ++PNP VGCVIV+ + +I+ G+ G HAE+ A+ A G
Sbjct: 12 MSRAIHLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMA---GDK 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+TVY+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI V
Sbjct: 69 AKGATVYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDAGIEV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ GL++++A ++N F RMQ G+P+V++K+A+SLD +T+L N SQWITS +R D
Sbjct: 129 EIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSPAARRDVQN 188
Query: 179 WRARSCAILT 188
+RA++ A+L+
Sbjct: 189 YRAKAGAVLS 198
>gi|424032228|ref|ZP_17771648.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-01]
gi|424042788|ref|ZP_17780462.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-02]
gi|408876233|gb|EKM15362.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-01]
gi|408887210|gb|EKM25835.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-02]
Length = 374
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GNKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVDVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF MQ G+P+V++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLESDAIELNKGFIKFMQTGMPYVQLKMAASLDGQSALNNGQSQWITSPKARQDVQRY 194
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 195 RALSGAILS 203
>gi|432459384|ref|ZP_19701548.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE204]
gi|433066621|ref|ZP_20253465.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE128]
gi|430992468|gb|ELD08839.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE204]
gi|431591156|gb|ELI62156.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE128]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|339485448|ref|YP_004699976.1| riboflavin biosynthesis protein RibD [Pseudomonas putida S16]
gi|338836291|gb|AEJ11096.1| riboflavin biosynthesis protein RibD [Pseudomonas putida S16]
Length = 378
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GERA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 72 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 192 RARSSVVLT 200
>gi|398999026|ref|ZP_10701779.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM18]
gi|398132645|gb|EJM21907.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM18]
Length = 377
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCV+V++ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHVRAGEPHAEVHAL---RAAGDKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVKAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGTAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|419916870|ref|ZP_14435154.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli KD2]
gi|388395271|gb|EIL56495.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli KD2]
Length = 361
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|218703696|ref|YP_002411215.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli UMN026]
gi|293403533|ref|ZP_06647624.1| ribD [Escherichia coli FVEC1412]
gi|298379145|ref|ZP_06989026.1| ribD [Escherichia coli FVEC1302]
gi|300900480|ref|ZP_07118647.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 198-1]
gi|417585207|ref|ZP_12235987.1| riboflavin biosynthesis protein RibD [Escherichia coli
STEC_C165-02]
gi|432352076|ref|ZP_19595385.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE2]
gi|432400524|ref|ZP_19643284.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE26]
gi|432474433|ref|ZP_19716446.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE208]
gi|432492709|ref|ZP_19734548.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE213]
gi|432521050|ref|ZP_19758215.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE228]
gi|432541267|ref|ZP_19778142.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE235]
gi|432629983|ref|ZP_19865933.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE80]
gi|432664601|ref|ZP_19900197.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE116]
gi|432773593|ref|ZP_20007883.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE54]
gi|432837962|ref|ZP_20071455.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE140]
gi|432884379|ref|ZP_20099335.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE158]
gi|432910099|ref|ZP_20117226.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE190]
gi|433017369|ref|ZP_20205640.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE105]
gi|433051712|ref|ZP_20238950.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE122]
gi|433157356|ref|ZP_20342232.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE177]
gi|433201834|ref|ZP_20385646.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE95]
gi|218430793|emb|CAR11667.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli UMN026]
gi|291429386|gb|EFF02406.1| ribD [Escherichia coli FVEC1412]
gi|298280258|gb|EFI21762.1| ribD [Escherichia coli FVEC1302]
gi|300355961|gb|EFJ71831.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 198-1]
gi|345341432|gb|EGW73837.1| riboflavin biosynthesis protein RibD [Escherichia coli
STEC_C165-02]
gi|430880709|gb|ELC03984.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE2]
gi|430929244|gb|ELC49755.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE26]
gi|431010373|gb|ELD24721.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE208]
gi|431013115|gb|ELD26849.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE213]
gi|431045604|gb|ELD55834.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE228]
gi|431064521|gb|ELD73388.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE235]
gi|431174502|gb|ELE74547.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE80]
gi|431204669|gb|ELF03227.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE116]
gi|431320714|gb|ELG08344.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE54]
gi|431391865|gb|ELG75469.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE140]
gi|431419967|gb|ELH02301.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE158]
gi|431447174|gb|ELH27916.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE190]
gi|431537539|gb|ELI13656.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE105]
gi|431575847|gb|ELI48570.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE122]
gi|431682042|gb|ELJ47811.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE177]
gi|431726350|gb|ELJ90160.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE95]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|218549926|ref|YP_002383717.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia fergusonii ATCC 35469]
gi|218357467|emb|CAQ90106.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia fergusonii ATCC 35469]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIATGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|395228122|ref|ZP_10406446.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
A1]
gi|421843747|ref|ZP_16276907.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424730619|ref|ZP_18159214.1| riboflavin biosynthesis protein [Citrobacter sp. L17]
gi|394718244|gb|EJF23881.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
A1]
gi|411775468|gb|EKS58914.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422894812|gb|EKU34619.1| riboflavin biosynthesis protein [Citrobacter sp. L17]
gi|455641827|gb|EMF20998.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Citrobacter freundii GTC 09479]
Length = 367
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM E
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEV 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EQLNKGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|343505430|ref|ZP_08743002.1| riboflavin-specific deaminase [Vibrio ichthyoenteri ATCC 700023]
gi|342807728|gb|EGU42908.1| riboflavin-specific deaminase [Vibrio ichthyoenteri ATCC 700023]
Length = 368
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ A+ I ++PNP VGCVI ++ +I+ G+ G HAE+ AL A G
Sbjct: 12 MSRAIKLAQGGIYTTAPNPNVGCVITRDGQIVGEGFHFRAGEPHAEVHALRMA---GELA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LI + + KVI A+ DPNP VSG+G+ L AGI V+
Sbjct: 69 EGATAYVTLEPCSHYGRTPPCAEGLINAKVAKVICAMQDPNPQVSGRGIRMLREAGIEVQ 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F RMQ G+P+V++K+A+SLD +T+L N SQWITS ++R D +
Sbjct: 129 VGLLEADAQALNPAFIKRMQTGMPFVQLKMAASLDGQTALANGHSQWITSAQARQDVQVL 188
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 189 RAQSGAILS 197
>gi|386612608|ref|YP_006132274.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNK88]
gi|332341777|gb|AEE55111.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNK88]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|301022597|ref|ZP_07186469.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 69-1]
gi|300397478|gb|EFJ81016.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 69-1]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|332290249|ref|YP_004421101.1| hypothetical protein UMN179_02191 [Gallibacterium anatis UMN179]
gi|330433145|gb|AEC18204.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
Length = 372
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ AK +PNP VGCV+VK I+ GY + G HAE+ A+ A G
Sbjct: 14 MALAIELAKKGRFTCTPNPAVGCVLVKNGEIVGKGYHEKAGEPHAEVMAMREA---GEKA 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC + LI++G+K+V+ A+ DPNP V+G+G+ L AGI
Sbjct: 71 NGATAYVTLEPCSHYGRTPPCAKGLIEAGVKRVVAAMQDPNPQVAGRGLKMLADAGIETA 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q++A ++N GF RM+ G P+V++K+A S+D +T++ N SQWIT + +R D +
Sbjct: 131 VGLLQQQAEQLNKGFLKRMRTGFPYVQLKMAISIDGRTAMANGESQWITGEAARQDVQQY 190
Query: 180 RARSCAILT 188
RA + AIL+
Sbjct: 191 RAMASAILS 199
>gi|440737909|ref|ZP_20917460.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
BRIP34879]
gi|440381648|gb|ELQ18174.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
BRIP34879]
Length = 375
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +I+ G+ + G HAE +AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNAL---RAAGSKA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +AL+ +G+ +V+ + DPNP V+G+G+ +L AGI V+
Sbjct: 70 RGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 130 SGVLETEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 189
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 190 RAQASVVLTGAD 201
>gi|386742760|ref|YP_006215939.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia stuartii MRSN 2154]
gi|384479453|gb|AFH93248.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia stuartii MRSN 2154]
Length = 371
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K +SPNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MARALELAQKGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMA---GEKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+++V+ A+ DPNP V+G+G+ L AGI
Sbjct: 66 KGATAYVTLEPCSHHGRTPPCAEALINAGVRRVVAAMQDPNPQVAGRGLYMLSQAGIETA 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA +N GF RM+ P+V++K+A+SLD KT+L + S+WITS +R D +
Sbjct: 126 SGVLMEEAESLNRGFLKRMRTAFPYVQLKLAASLDGKTALESGESKWITSAAARQDVQVL 185
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 186 RAQASAILS 194
>gi|432717422|ref|ZP_19952424.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE9]
gi|431267026|gb|ELF58559.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE9]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|431800568|ref|YP_007227471.1| riboflavin biosynthesis protein RibD [Pseudomonas putida HB3267]
gi|430791333|gb|AGA71528.1| riboflavin biosynthesis protein RibD [Pseudomonas putida HB3267]
Length = 376
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|423112827|ref|ZP_17100518.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5245]
gi|376390321|gb|EHT03007.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5245]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIV++ I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVEDGEIVGEGFHYRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L G+ V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCEALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQEGVDVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G PW+++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|296101536|ref|YP_003611682.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055995|gb|ADF60733.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L GI V GLM ++A IN
Sbjct: 76 SHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGIDVSHGLMMQDAEAIN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQHLRAQSHAILT 192
>gi|237730390|ref|ZP_04560871.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
30_2]
gi|226905929|gb|EEH91847.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
30_2]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM E
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEV 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EQLNKGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|424817283|ref|ZP_18242434.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia fergusonii ECD227]
gi|325498303|gb|EGC96162.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia fergusonii ECD227]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|415836258|ref|ZP_11518670.1| riboflavin biosynthesis protein RibD [Escherichia coli RN587/1]
gi|417284187|ref|ZP_12071482.1| riboflavin biosynthesis protein RibD [Escherichia coli 3003]
gi|323191332|gb|EFZ76595.1| riboflavin biosynthesis protein RibD [Escherichia coli RN587/1]
gi|386242396|gb|EII84131.1| riboflavin biosynthesis protein RibD [Escherichia coli 3003]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMTSGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|358010935|ref|ZP_09142745.1| pyrimidine deaminase [Acinetobacter sp. P8-3-8]
Length = 369
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ +A+ +I + PNP VGCVIVKE I+ G T GG HAE+ A+ A Q
Sbjct: 20 MRQAIAEAEKAIYRTRPNPAVGCVIVKEGVIVGRGATAPVGGPHAEVFAMREAGEQAR-- 77
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC + L+++G+ KV+IA DPNPLV+GKGV L AGI V
Sbjct: 78 -GATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVVIACADPNPLVAGKGVQILQDAGIEVV 136
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+ EA N GF M G+P+VR+K+ASSLD +T++ + S+WIT E+R D W
Sbjct: 137 TDVCTTEAEVQNKGFLKAMATGMPYVRLKVASSLDGRTAMASGESKWITGTEARQDVQHW 196
Query: 180 RARSCAILTG 189
RA S A++TG
Sbjct: 197 RAISGAVITG 206
>gi|343500592|ref|ZP_08738482.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
tubiashii ATCC 19109]
gi|418477325|ref|ZP_13046458.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342819954|gb|EGU54785.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
tubiashii ATCC 19109]
gi|384575065|gb|EIF05519.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 368
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+ AK I ++PNP VGCVIV +I+ G+ G HAE+ A+ A G
Sbjct: 12 MSRAIDLAKGGIYTTAPNPNVGCVIVNNDQIVGEGFHFRAGEPHAEVHAMRMA---GEKT 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP+V+G+G+ L AGI V+
Sbjct: 69 IGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPVVAGRGIKMLRDAGIKVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N F +M+ G+P+V++K+A+SLD +T+L N SQWITS ++R D +
Sbjct: 129 VGLLEQDALALNPAFIKKMKTGMPFVQLKMAASLDGQTALKNGQSQWITSPQARQDVQKF 188
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 189 RAQSGAILS 197
>gi|388601537|ref|ZP_10159933.1| pyrimidine deaminase [Vibrio campbellii DS40M4]
Length = 374
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GDKT 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G L AG+ V+
Sbjct: 75 QGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLESEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RALSGGILS 203
>gi|283784233|ref|YP_003364098.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
gi|282947687|emb|CBG87242.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGYHYRAGEPHAEVHALRMA---GEKAKGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGMARVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G P+V++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|432390341|ref|ZP_19633205.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE21]
gi|430922698|gb|ELC43445.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE21]
Length = 367
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|163803478|ref|ZP_02197350.1| hypothetical protein 1103602000439_AND4_19771 [Vibrio sp. AND4]
gi|159172738|gb|EDP57587.1| hypothetical protein AND4_19771 [Vibrio sp. AND4]
Length = 375
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 19 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GDKT 75
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A DPNP V+G+G L AG+ V+
Sbjct: 76 QGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCATEDPNPKVAGRGFQMLRDAGVDVQ 135
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q EA E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 136 VGLLQSEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQRY 195
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 196 RALSGGILS 204
>gi|398994114|ref|ZP_10697036.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM21]
gi|398133173|gb|EJM22401.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM21]
Length = 377
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +++ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHAEVHAL---RAAGEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G+TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGHTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|238791408|ref|ZP_04635046.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
intermedia ATCC 29909]
gi|238729024|gb|EEQ20540.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
intermedia ATCC 29909]
Length = 369
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A+L + PNP VGCV+V++ I+ GY G HAE+ AL A G
Sbjct: 8 MARAFELARLGRFTTPPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 65 RGATAYVTLEPCSHHGCTPPCADALVAAGVIRVVAAMQDPNPQVAGRGLYKLKQAGIAVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +A +N+GF RM+ G P++++K+A+SLD +T++ + SQWITS ++R D +
Sbjct: 125 HGLMLAQAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQRF 184
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 185 RAESSAILS 193
>gi|183601038|ref|ZP_02962531.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827]
gi|188019376|gb|EDU57416.1| riboflavin biosynthesis protein RibD [Providencia stuartii ATCC
25827]
Length = 371
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K +SPNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MARALELAQKGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMA---GEKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+++V+ A+ DPNP V+G+G+ L AGI
Sbjct: 66 KGATAYVTLEPCSHHGRTPPCAEALINAGVRRVVAAMQDPNPQVAGRGLYMLSQAGIETA 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +EA +N GF RM+ P+V++K+A+SLD KT+L + S+WITS +R D +
Sbjct: 126 SGVLMEEAESLNRGFLKRMRTAFPYVQLKLAASLDGKTALESGESKWITSAAARQDVQVL 185
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 186 RAQASAILS 194
>gi|392977853|ref|YP_006476441.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323786|gb|AFM58739.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 367
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L GI V GLM ++A IN
Sbjct: 76 SHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGIDVSHGLMMQDAEAIN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQRLRAQSHAILT 192
>gi|441504652|ref|ZP_20986645.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Photobacterium sp. AK15]
gi|441427751|gb|ELR65220.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Photobacterium sp. AK15]
Length = 375
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 129/189 (68%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCVI + I+ GY G HAE+ AL A G
Sbjct: 10 MLRAIKLAKRGRFTTAPNPNVGCVIAHGEDIVGEGYHYQAGQPHAEVFAL---RAAGEKA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T Y+TLEPCS++G TPPC EAL+K+ + +V+ A+ DPNP V+G+G+ L AGI V+
Sbjct: 67 HGATAYVTLEPCSHYGRTPPCAEALVKAQVSRVVCAMVDPNPRVAGRGIKMLRDAGIEVQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ E++++N+GF RM+ G+P+V++K+A+SLD +T+L N S+WIT ++R D +
Sbjct: 127 IGLLEAESHQLNVGFIKRMKTGMPFVQLKLAASLDGRTALANGESKWITGPDARADVQRF 186
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 187 RAQAGAILS 195
>gi|398983667|ref|ZP_10690131.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM24]
gi|399012350|ref|ZP_10714674.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM16]
gi|398115912|gb|EJM05685.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM16]
gi|398156839|gb|EJM45251.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM24]
Length = 377
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCV+V++ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHERAGEPHAEVHAL---RAAGELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVGRVVAAMRDPNPQVAGRGLQRLTDAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEAEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQAAVVLTGAD 203
>gi|420370079|ref|ZP_14870695.1| riboflavin biosynthesis protein RibD [Shigella flexneri 1235-66]
gi|391320508|gb|EIQ77340.1| riboflavin biosynthesis protein RibD [Shigella flexneri 1235-66]
Length = 367
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM E
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEV 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
++N GF RM+ G P+V++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EQLNKGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPQARCDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|423693809|ref|ZP_17668329.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
SS101]
gi|388002113|gb|EIK63442.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
SS101]
Length = 375
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +I+ G+ + G HAE +AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNAL---RAAGDKA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +AL+ +G+ +V+ + DPNP V+G+G+ +L AGI V+
Sbjct: 70 RGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 189
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 190 RAEASVVLTGAD 201
>gi|26987252|ref|NP_742677.1| riboflavin biosynthesis protein RibD [Pseudomonas putida KT2440]
gi|24981894|gb|AAN66141.1|AE016242_9 riboflavin biosynthesis protein RibD [Pseudomonas putida KT2440]
Length = 378
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 72 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 192 RARSSVVLT 200
>gi|386010175|ref|YP_005928452.1| protein RibD [Pseudomonas putida BIRD-1]
gi|313496881|gb|ADR58247.1| RibD [Pseudomonas putida BIRD-1]
Length = 376
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|260899221|ref|ZP_05907616.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AQ4037]
gi|308106651|gb|EFO44191.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AQ4037]
Length = 374
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+ I ++PNP VGCVIV++ II GY G HAE+ A+ A G
Sbjct: 18 MSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEPHAEVYAMRMA---GDKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQRY 194
Query: 180 RARSCAILT 188
RA+S IL+
Sbjct: 195 RAQSGGILS 203
>gi|377578766|ref|ZP_09807741.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia hermannii NBRC 105704]
gi|377539849|dbj|GAB52906.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia hermannii NBRC 105704]
Length = 367
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ +SPNP VGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTSPNPNVGCVIVRDGEVVGEGFHYRAGEPHAEVHALRMA---GDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI G+ +V+ A+ DPNP V+G+G+ +L GI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIAVGVSRVVAAMQDPNPQVAGRGLYRLKQEGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G P+V++K+ +SLD +T++ + SQWITS ESR D +
Sbjct: 124 HGLMMNEAEALNKGFLKRMRTGFPFVQLKLGASLDGRTAMASGESQWITSAESRRDVQRF 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSSAILT 192
>gi|293408560|ref|ZP_06652399.1| riboflavin biosynthesis protein RibD [Escherichia coli B354]
gi|432541789|ref|ZP_19778650.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE236]
gi|432547133|ref|ZP_19783930.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE237]
gi|432620516|ref|ZP_19856562.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE76]
gi|432791662|ref|ZP_20025756.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE78]
gi|432797629|ref|ZP_20031657.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE79]
gi|432813909|ref|ZP_20047720.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE115]
gi|291471738|gb|EFF14221.1| riboflavin biosynthesis protein RibD [Escherichia coli B354]
gi|431078306|gb|ELD85364.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE236]
gi|431085306|gb|ELD91419.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE237]
gi|431162875|gb|ELE63315.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE76]
gi|431342458|gb|ELG29437.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE78]
gi|431345849|gb|ELG32763.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE79]
gi|431368928|gb|ELG55159.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE115]
Length = 367
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMESGESQWITSPQARLDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|375264655|ref|YP_005022098.1| riboflavin-specific deaminase [Vibrio sp. EJY3]
gi|369839979|gb|AEX21123.1| riboflavin-specific deaminase [Vibrio sp. EJY3]
Length = 372
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ AK I ++PNP VGCVIV++ +I+ GY G HAE+ AL A +
Sbjct: 18 MSRAIRLAKRGIYTTAPNPNVGCVIVRDGQIVGEGYHLRAGEPHAEVHALRMAEGKAE-- 75
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AGI V+
Sbjct: 76 -GATAYVTLEPCSHHGRTPPCAEGLIKAKVARVVCAMQDPNPKVAGRGIQMLRDAGIEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF MQ G+P++++K+A+SLD +T+L N SQWITS +R D +
Sbjct: 135 VGLLESDALELNRGFIKFMQTGMPFIQLKMAASLDGQTALSNGQSQWITSPRARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RAMSGGILS 203
>gi|330812014|ref|YP_004356476.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327380122|gb|AEA71472.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; riboflavin
biosynthesis protein RibD [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 377
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARRGHYTTHPNPRVGCVIVRDGQIVGEGWHIRAGEPHAEVHALRAA---GEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM++G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNEGFLKRMEQGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|148545799|ref|YP_001265901.1| riboflavin biosynthesis protein RibD [Pseudomonas putida F1]
gi|148509857|gb|ABQ76717.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas putida F1]
Length = 376
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|28897453|ref|NP_797058.1| riboflavin-specific deaminase [Vibrio parahaemolyticus RIMD
2210633]
gi|260366283|ref|ZP_05778739.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
K5030]
gi|260876413|ref|ZP_05888768.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AN-5034]
gi|260898684|ref|ZP_05907180.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
Peru-466]
gi|28805665|dbj|BAC58942.1| riboflavin-specific deaminase [Vibrio parahaemolyticus RIMD
2210633]
gi|308086936|gb|EFO36631.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
Peru-466]
gi|308092982|gb|EFO42677.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AN-5034]
gi|308112701|gb|EFO50241.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
K5030]
Length = 374
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A+ I ++PNP VGCVIV++ II GY G HAE+ A+ A G
Sbjct: 18 MSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEPHAEVYAMRMA---GDKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AG+ V+
Sbjct: 75 EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQRY 194
Query: 180 RARSCAILT 188
RA+S IL+
Sbjct: 195 RAQSGGILS 203
>gi|421524832|ref|ZP_15971453.1| riboflavin biosynthesis protein RibD [Pseudomonas putida LS46]
gi|402751295|gb|EJX11808.1| riboflavin biosynthesis protein RibD [Pseudomonas putida LS46]
Length = 376
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|334123200|ref|ZP_08497229.1| riboflavin biosynthesis protein RibD [Enterobacter hormaechei ATCC
49162]
gi|333391074|gb|EGK62197.1| riboflavin biosynthesis protein RibD [Enterobacter hormaechei ATCC
49162]
Length = 367
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L GI V GLM ++A IN
Sbjct: 76 SHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGIDVSHGLMMQDAEAIN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMANGESQWITSPQARRDVQRLRAQSHAILT 192
>gi|395446901|ref|YP_006387154.1| riboflavin biosynthesis protein RibD [Pseudomonas putida ND6]
gi|388560898|gb|AFK70039.1| riboflavin biosynthesis protein RibD [Pseudomonas putida ND6]
Length = 378
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 72 RGACAYVTLEPCSHHGRTPPCAEALVKAGVTRVVAAMQDPNPQVAGQGLRRLAEAGIEVA 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 192 RARSSVVLT 200
>gi|331661791|ref|ZP_08362714.1| riboflavin biosynthesis protein RibD [Escherichia coli TA143]
gi|432769214|ref|ZP_20003587.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE50]
gi|432959797|ref|ZP_20150083.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE202]
gi|433061630|ref|ZP_20248596.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE125]
gi|331060213|gb|EGI32177.1| riboflavin biosynthesis protein RibD [Escherichia coli TA143]
gi|431319254|gb|ELG06938.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE50]
gi|431478692|gb|ELH58437.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE202]
gi|431588334|gb|ELI59619.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE125]
Length = 367
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMESGESQWITSPQARLDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|384426535|ref|YP_005635892.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
raphani 756C]
gi|341935635|gb|AEL05774.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
raphani 756C]
Length = 364
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV++ + G+ + GG HAE+ AL A G +T Y+TLEPC+
Sbjct: 24 TTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFAL---RAAGEQARGATAYVTLEPCA 80
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC ALI +G+ +V+ A+ DP P V+G G L AGI V G+M+ +A +N
Sbjct: 81 HYGRTPPCALALIAAGVTRVVAAMADPFPQVNGGGFTLLRDAGIQVHSGVMEAQARALNQ 140
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF SR++RG PWVR+K+ +SLD +T++ + S+WIT ++R D WRAR+ ILTG
Sbjct: 141 GFLSRVERGRPWVRVKLGASLDGRTAMASGESKWITGADARADVQRWRARAGVILTGAG 199
>gi|406973336|gb|EKD96804.1| hypothetical protein ACD_23C01247G0001 [uncultured bacterium]
Length = 313
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 106/142 (74%)
Query: 48 ALLNAAAQGYDVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKG 107
AL +AA +G+ V +TVY+TLEPCS+ G T PC +ALIK+G+ KV+ AI DPNPLV G+G
Sbjct: 2 ALRDAALRGHSVEGATVYVTLEPCSHQGRTGPCCDALIKAGVAKVVAAIPDPNPLVGGQG 61
Query: 108 VAQLISAGISVKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWI 167
A+L + G+SV+ G + E+N+GFFSRM R PWVRMK+A+SLD T+L N SSQWI
Sbjct: 62 FARLRARGVSVEIGPGATASRELNLGFFSRMVRKTPWVRMKVAASLDGVTALQNGSSQWI 121
Query: 168 TSKESRNDSHIWRARSCAILTG 189
T +R D H WRAR+CA+LTG
Sbjct: 122 TGPSARADGHAWRARACAVLTG 143
>gi|397696264|ref|YP_006534147.1| riboflavin biosynthesis protein RibD [Pseudomonas putida DOT-T1E]
gi|397332994|gb|AFO49353.1| riboflavin biosynthesis protein RibD [Pseudomonas putida DOT-T1E]
Length = 376
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|381196744|ref|ZP_09904085.1| pyrimidine deaminase [Acinetobacter lwoffii WJ10621]
Length = 367
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++ PNP VGCVIVK+ ++ GY G HAE+ A+ A G +T Y+TLEPC+
Sbjct: 29 STKPNPNVGCVIVKDGLLLGTGYHPKAGQPHAEVFAMREA---GEQTQGATAYVTLEPCA 85
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC + L+++G+ +V+IA DPNPLV+GKGV L AGI V G+ Q EA+++N
Sbjct: 86 HYGRTPPCAKGLVEAGVARVVIACPDPNPLVAGKGVQILKEAGIEVDVGICQAEAHQLNA 145
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF M G+P+VR+K+ASSLD +T++ + S+WIT ++R D +RA S ++TG
Sbjct: 146 GFLKAMATGMPYVRLKVASSLDGRTAMASGESKWITGSDARLDVQHFRAISGVVITG 202
>gi|440288790|ref|YP_007341555.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Enterobacteriaceae bacterium strain FGI 57]
gi|440048312|gb|AGB79370.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Enterobacteriaceae bacterium strain FGI 57]
Length = 367
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNPRVGCVIV + I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPRVGCVIVNQGEIVGEGFHYRAGEPHAEVHALRMA---GEKAKGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMSEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G P+V++K+ +SLD +T++ + SQWITS ++R D RA S AIL
Sbjct: 132 EALNKGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAESHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|118602777|ref|YP_903992.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|118567716|gb|ABL02521.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 349
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 129/194 (66%), Gaps = 12/194 (6%)
Query: 1 MTLALQ---QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDAL--LNAAAQ 55
M +AL+ Q K + S NP VGCVIVK +II+ GY ++ G H EI+AL +N AQ
Sbjct: 13 MVIALKLASQGKYGVKS--NPMVGCVIVKHTKIIAKGYHQTFGKAHGEINALQQINHQAQ 70
Query: 56 GYDVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAG 115
G +T Y+TLEPCS+ G TP C +A+I SG+KKVIIA+ DPNPLV+GKGV L +AG
Sbjct: 71 G-----ATFYVTLEPCSHQGKTPSCAQAIIHSGVKKVIIAMLDPNPLVNGKGVVMLENAG 125
Query: 116 ISVKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRND 175
I VK GL++ +A +N GF M+ P+VR KIA SLD KTS+ + S+WITS+ +R D
Sbjct: 126 IEVKIGLLENDALTLNQGFIKYMKTNKPFVRCKIAMSLDGKTSMSSGESKWITSEVTRLD 185
Query: 176 SHIWRARSCAILTG 189
RA AI+TG
Sbjct: 186 VQKLRANHQAIMTG 199
>gi|261253738|ref|ZP_05946311.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954539|ref|ZP_12597573.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|260937129|gb|EEX93118.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342815259|gb|EGU50183.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 368
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 129/189 (68%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ AK I ++PNP VGCVIV+ I+ G+ G HAE+ AL A G
Sbjct: 12 MSRAIELAKGGIYTTAPNPNVGCVIVQGDEIVGEGFHYRAGEPHAEVHALRMA---GDRA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI+V+
Sbjct: 69 VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMEDPNPKVAGRGIQMLRDAGITVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N F +M+ G+P+V++K+A+S+D +T+L N SQWITS ++R D +
Sbjct: 129 VGLLEQQAESLNPAFIKQMKTGMPFVQLKMAASIDGQTALANGQSQWITSPQARQDVQKY 188
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 189 RAKSGAILS 197
>gi|148244868|ref|YP_001219562.1| bifunctional riboflavin biosynthesis protein RibD [Candidatus
Vesicomyosocius okutanii HA]
gi|146326695|dbj|BAF61838.1| bifunctional riboflavin biosynthesis protein RibD [Candidatus
Vesicomyosocius okutanii HA]
Length = 349
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 128/192 (66%), Gaps = 8/192 (4%)
Query: 1 MTLALQ---QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGY 57
MT+A++ Q + + S NP VGCVIVK +II+ GY +S G H EI+AL Y
Sbjct: 13 MTIAIKLALQGRYGVKS--NPMVGCVIVKHSKIIAKGYHESFGQAHGEINALQQI---NY 67
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+ +T+Y+TLEPCS+ G TP C +A+I SG+KKVIIA+ DPNPLV+GKGV L AGI
Sbjct: 68 KAHGATLYVTLEPCSHQGKTPSCAQAIINSGVKKVIIAMLDPNPLVNGKGVVMLKYAGIE 127
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
VK GL++ +A +N GF RMQ P++R K+A S+D KTS+ + S+WITSK +R D
Sbjct: 128 VKIGLLKNDASILNQGFIKRMQTNQPFIRCKVAMSIDGKTSMSSGESKWITSKVARLDVQ 187
Query: 178 IWRARSCAILTG 189
RA AI+TG
Sbjct: 188 KLRANHQAIITG 199
>gi|444425611|ref|ZP_21221047.1| pyrimidine deaminase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241084|gb|ELU52613.1| pyrimidine deaminase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 374
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 18 MSRALMLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GDKT 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G L AG+ V+
Sbjct: 75 QGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLESEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RALSGGILS 203
>gi|388466787|ref|ZP_10140997.1| riboflavin biosynthesis protein RibD [Pseudomonas synxantha BG33R]
gi|388010367|gb|EIK71554.1| riboflavin biosynthesis protein RibD [Pseudomonas synxantha BG33R]
Length = 375
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +I+ G+ + G HAE +AL A G
Sbjct: 13 MARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNAL---RAAGEKA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +AL+ +G+ +V+ + DPNP V+G+G+ +L AGI V+
Sbjct: 70 RGATVYVTLEPCSHHGRTPPCADALVSAGVVRVVAGMQDPNPEVAGRGMQRLAQAGIEVR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 130 SGVLEAEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 189
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 190 RAEASVVLTGAD 201
>gi|423699577|ref|ZP_17674067.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
Q8r1-96]
gi|387997007|gb|EIK58337.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
Q8r1-96]
Length = 377
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARRGHYTTHPNPRVGCVIVRDGQIVGEGWHIRAGEPHAEVHALRAA---GEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM++G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNEGFLKRMEQGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|422604396|ref|ZP_16676413.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. mori str. 301020]
gi|330888055|gb|EGH20716.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. mori
str. 301020]
Length = 276
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 133/194 (68%), Gaps = 8/194 (4%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M AL+ A+ + S+ PNPRVGCVIV++ +I+ G+ G HAE+ AL A+ A+G
Sbjct: 13 MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQASELARG- 71
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP VSG+G+ +L++AGI
Sbjct: 72 ----ATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIG 127
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ G+++ EA +N GF RM+ G P++R+K+A SLD +T++ + SQWIT E+R+
Sbjct: 128 VQCGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQ 187
Query: 178 IWRARSCAILTGKN 191
RA+S +LTG +
Sbjct: 188 RLRAQSSVVLTGAD 201
>gi|398891069|ref|ZP_10644509.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM55]
gi|398187304|gb|EJM74648.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM55]
Length = 377
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVQDGQIVGEGWHVRAGEPHAEVHAL---RAAGEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGTAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|323491728|ref|ZP_08096906.1| riboflavin-specific deaminase [Vibrio brasiliensis LMG 20546]
gi|323314090|gb|EGA67176.1| riboflavin-specific deaminase [Vibrio brasiliensis LMG 20546]
Length = 368
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ AK I ++PNP VGCVI ++ I+ G+ G HAE+ AL A G
Sbjct: 12 MSRAIELAKGGIYTTAPNPNVGCVITRDGEIVGEGFHYRAGEPHAEVHALRMA---GEKS 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI V+
Sbjct: 69 VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVAGRGIQMLRDAGIEVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N F RM+ +P+V++K+A+SLD +T+L N SQWITS ++R D +
Sbjct: 129 VGLLEQDAINLNPAFIKRMKTAMPFVQLKMAASLDGQTALANGQSQWITSSKARQDVQKY 188
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 189 RAQSGAILS 197
>gi|419373879|ref|ZP_13914935.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14B]
gi|378226293|gb|EHX86480.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14B]
Length = 367
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 183
Query: 180 RARSCAILT 188
R +S AILT
Sbjct: 184 RTQSHAILT 192
>gi|331681807|ref|ZP_08382440.1| riboflavin biosynthesis protein RibD [Escherichia coli H299]
gi|450185624|ref|ZP_21889186.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli SEPT362]
gi|331081009|gb|EGI52174.1| riboflavin biosynthesis protein RibD [Escherichia coli H299]
gi|449325068|gb|EMD14986.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli SEPT362]
Length = 367
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARLDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|345298090|ref|YP_004827448.1| riboflavin biosynthesis protein RibD [Enterobacter asburiae LF7a]
gi|345092027|gb|AEN63663.1| riboflavin biosynthesis protein RibD [Enterobacter asburiae LF7a]
Length = 367
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L GI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +A IN GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D
Sbjct: 124 HGLMMHDAEVINKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|90415720|ref|ZP_01223654.1| riboflavin biosynthesis protein [gamma proteobacterium HTCC2207]
gi|90333043|gb|EAS48213.1| riboflavin biosynthesis protein [marine gamma proteobacterium
HTCC2207]
Length = 373
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 128/190 (67%), Gaps = 5/190 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK +SPNP VGCV+V + I+ G+T+ GGNHAE++AL AA+
Sbjct: 11 MSRALELAAKGRFTTSPNPSVGCVLVVDGAIVGEGHTRPAGGNHAEVEALNAAASA---- 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC E LI +GI +V+IA DPNP V+G+G+ L AGI V
Sbjct: 67 KGATAYVTLEPCSHSGKTGPCVEVLIDAGISRVVIACEDPNPKVAGEGIKLLQDAGIEVA 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + +A E+N GF R ++G+PWV +K+A+SLD +T++ + SQWIT+ SR D
Sbjct: 127 CGLYEDQARELNKGFIKRHEQGLPWVVVKMAASLDGRTAMASGQSQWITTPASRKDVQRL 186
Query: 180 RARSCAILTG 189
RA +CAI+TG
Sbjct: 187 RAANCAIITG 196
>gi|440759481|ref|ZP_20938618.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea
agglomerans 299R]
gi|436426799|gb|ELP24499.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea
agglomerans 299R]
Length = 366
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIV++ + G+ + G HAE+ AL A G
Sbjct: 6 MARALELARRGRFTTMPNPNVGCVIVRDGEVAGEGWHQRAGEPHAEVHALRMA---GEKA 62
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L +GI+V
Sbjct: 63 RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLHRLHQSGIAVS 122
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 123 HGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQRL 182
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 183 RAQSAAILS 191
>gi|283834269|ref|ZP_06354010.1| riboflavin biosynthesis protein RibD [Citrobacter youngae ATCC
29220]
gi|291069791|gb|EFE07900.1| riboflavin biosynthesis protein RibD [Citrobacter youngae ATCC
29220]
Length = 367
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGYHYRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM E
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEV 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EQLNKGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|332141886|ref|YP_004427624.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Deep ecotype']
gi|410862290|ref|YP_006977524.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii AltDE1]
gi|327551908|gb|AEA98626.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Deep ecotype']
gi|410819552|gb|AFV86169.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii AltDE1]
Length = 379
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 124/192 (64%), Gaps = 3/192 (1%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAA-AQGY 57
M A+Q A K +SPNPRVGCVIV E +++ GY G HAE+ AL AA A+
Sbjct: 13 MAKAIQLANKGRFTTSPNPRVGCVIVDEDSQLLGQGYHIQAGTPHAEVHALRQAAHARSE 72
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T Y+TLEPCS+FG TPPC +AL+++ + +V+IA+ DPNP V G G++ L AGI
Sbjct: 73 GAKGATAYVTLEPCSHFGRTPPCAKALVEAQVARVVIAMTDPNPNVCGNGISMLQEAGIE 132
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V +M EA +N GF RM G P+VR+K+ S+D K +L N SQWIT+ E+R D
Sbjct: 133 VVSEVMAAEAAALNPGFIKRMLTGKPFVRVKLGISVDGKIALQNGVSQWITTPEARRDVQ 192
Query: 178 IWRARSCAILTG 189
+RA+SC +LTG
Sbjct: 193 HYRAQSCVVLTG 204
>gi|304395476|ref|ZP_07377359.1| riboflavin biosynthesis protein RibD [Pantoea sp. aB]
gi|304356770|gb|EFM21134.1| riboflavin biosynthesis protein RibD [Pantoea sp. aB]
Length = 366
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIV++ + G+ + G HAE+ AL A G
Sbjct: 6 MARALELARRGRFTTMPNPNVGCVIVRDGEVAGEGWHQRAGEPHAEVHALRMA---GEKA 62
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L +GI+V
Sbjct: 63 RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLHRLHQSGIAVS 122
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 123 HGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQRL 182
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 183 RAQSAAILS 191
>gi|225848913|ref|YP_002729077.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644745|gb|ACN99795.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 366
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 130/192 (67%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL AK + PNP VG VIVK+ +II G+ G HAE +A+ +A ++G+D+
Sbjct: 8 MNIALDLAKERKGYTHPNPTVGAVIVKDGKIIGKGFHYKAGMPHAEREAIKDAKSKGFDL 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST++++LEPC ++G TPPCTEA+++ GI KV++A DPNPLV+GKGV L G+ V
Sbjct: 68 RGSTIFVSLEPCCHYGKTPPCTEAILEEGISKVVVATLDPNPLVAGKGVEILKQKGVEVV 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++K+A +IN FF + + P+V +K+A ++D K + SS+WITS+ESR +HI
Sbjct: 128 LGVLEKQAQKINEDFFIYITQKRPFVHIKVAQTIDGKIATKTGSSKWITSQESRKYAHIL 187
Query: 180 RARSCAILTGKN 191
R ++ A+L G N
Sbjct: 188 RNQATAVLVGSN 199
>gi|423127724|ref|ZP_17115403.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5250]
gi|376394763|gb|EHT07413.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5250]
Length = 367
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ +I+ G+ G HAE+ AL A G +T Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGKIVGEGFHYRAGEPHAEVHALRMA---GEKAQGATAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L G+ V GLM EA
Sbjct: 72 LEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGVDVSHGLMMNEA 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EALNKGFLKRMRTGFPYIQLKMGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|385810981|ref|YP_005847377.1| pyrimidine deaminase [Ignavibacterium album JCM 16511]
gi|383803029|gb|AFH50109.1| Pyrimidine deaminase [Ignavibacterium album JCM 16511]
Length = 362
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSYF 74
SPNP VGCVI K +II GY + G NHAEI+A+ N+A + + ST+Y+ LEPCS++
Sbjct: 22 SPNPMVGCVITKNNKIIGAGYHQKYGENHAEINAI-NSAVESLE--GSTLYVNLEPCSHY 78
Query: 75 GYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIGF 134
G+TPPC + +I+S IK+V+I D NPLVSG GV +L AGI VK G+++KE E+N F
Sbjct: 79 GHTPPCVDKIIESKIKRVVIGTLDVNPLVSGNGVKKLKKAGIEVKVGVLEKECTELNKFF 138
Query: 135 FSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGK 190
F + + IP+V +KIA +LD K + +N SQWITS ESR H RA A+L GK
Sbjct: 139 FKYITKKIPYVTLKIAQTLDGKIADESNYSQWITSAESRKLVHSLRAEYDAVLIGK 194
>gi|254480859|ref|ZP_05094105.1| riboflavin biosynthesis protein RibD [marine gamma proteobacterium
HTCC2148]
gi|214038654|gb|EEB79315.1| riboflavin biosynthesis protein RibD [marine gamma proteobacterium
HTCC2148]
Length = 371
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 123/190 (64%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ S PNP VGCV+ ++ +I G+T+ GGNHAE+ AL A+ D
Sbjct: 10 MARALQLARRGQYSCMPNPHVGCVLERDGAVIGEGFTQPAGGNHAEVQAL----AEAGDA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC +ALI +G+ +V AI DPNPLV+G G+ +L +AGI V+
Sbjct: 66 SGATAYVTLEPCSHIGKTGPCADALITAGVSRVFAAIEDPNPLVAGNGLDKLRAAGIEVE 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A ++ GF SRM G VR K+A SLD +T++ + SQWIT +R D
Sbjct: 126 VGLLEADARKVIPGFISRMTGGRGRVRAKLAMSLDGRTAMASGESQWITGPAARADVQRL 185
Query: 180 RARSCAILTG 189
RA SCA++TG
Sbjct: 186 RAMSCAVITG 195
>gi|398865864|ref|ZP_10621373.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM78]
gi|398242313|gb|EJN27932.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM78]
Length = 377
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHERAGEPHAEVHAL---RAAGELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|374314196|ref|YP_005060625.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Serratia
symbiotica str. 'Cinara cedri']
gi|363988422|gb|AEW44613.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Serratia
symbiotica str. 'Cinara cedri']
Length = 369
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 126/191 (65%), Gaps = 8/191 (4%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M A + A+L ++PNP VGCVIV+ I+ GY G HAE+ AL A AQG
Sbjct: 8 MAHAFKLARLGRFTTAPNPNVGCVIVRNGVIVGEGYHLRAGEPHAEVHALNMAKEKAQG- 66
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T Y TLEPCS++G TPPCT+AL+ +GI +V+ AI DPNP V+G+G+ QL A I
Sbjct: 67 ----ATAYTTLEPCSHYGRTPPCTDALVAAGISRVVSAIQDPNPRVTGRGLQQLRKAKIE 122
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V GLM EA INIGF RM+ G+P+V++K+A SLD +T++ + SQWI+S ++R D
Sbjct: 123 VHYGLMSAEAEAINIGFLKRMRTGLPYVQLKLAISLDGRTAMASGQSQWISSSQARQDVQ 182
Query: 178 IWRARSCAILT 188
RA+S +IL+
Sbjct: 183 YLRAQSASILS 193
>gi|389720974|ref|ZP_10187730.1| pyrimidine deaminase [Acinetobacter sp. HA]
gi|388609255|gb|EIM38447.1| pyrimidine deaminase [Acinetobacter sp. HA]
Length = 362
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++ PNP VGCVIVK+ ++ G+ G HAE+ A+ A Q + +T Y+TLEPC+
Sbjct: 24 STKPNPNVGCVIVKDGVVVGEGFHPKAGQPHAEVFAMRQAGEQAH---GATAYVTLEPCA 80
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC + L+++G+ KV++A DPNPLV+GKGV L AGI+V+ G+ + EA+ +N
Sbjct: 81 HYGRTPPCAKGLVEAGVAKVVVACPDPNPLVAGKGVQILKDAGINVEVGICEDEAHPLNY 140
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF M G+P+VR+KIA SLD +T++ + S+WIT E+R D WRA S ++TG
Sbjct: 141 GFLKAMATGMPYVRVKIALSLDGRTAMASGESKWITGIEARQDVQHWRAISGGVITG 197
>gi|387131364|ref|YP_006294254.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Methylophaga sp. JAM7]
gi|386272653|gb|AFJ03567.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Methylophaga sp. JAM7]
Length = 365
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCV+VK I++ G+ + G HAE AL A A + Y+TLEPC
Sbjct: 20 FTTDPNPRVGCVLVKNNEILAEGWHEIAGQPHAERHALAKAGAT---AKGADCYVTLEPC 76
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI++GI++V+IA+ DPNP V+GKG+A+L AGI V G++ ++A ++N
Sbjct: 77 SHVGRTPPCADALIEAGIRRVVIAMKDPNPKVAGKGIARLEKAGIDVICGVLSEQAAQLN 136
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM++G P+VR KIA SLD +T++ + S+WITS +SR D RARS A+LTG
Sbjct: 137 PGFIQRMEQGRPFVRSKIAMSLDGRTAMASGESKWITSLDSRRDVQKLRARSSAVLTG 194
>gi|307718159|ref|YP_003873691.1| hypothetical protein STHERM_c04460 [Spirochaeta thermophila DSM
6192]
gi|306531884|gb|ADN01418.1| hypothetical protein STHERM_c04460 [Spirochaeta thermophila DSM
6192]
Length = 362
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 124/177 (70%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNP VG V+VK+ R++ G+ + G HAE+ AL A G + + +Y+TLEPC
Sbjct: 22 RTSPNPMVGAVVVKDGRVVGEGFHERAGLPHAEVAALSEA---GEEARGAEMYVTLEPCC 78
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPCT+A++K+G+++V++A DPNP V+GKG++ L AG+ V+ G++ +EA +N
Sbjct: 79 HWGRTPPCTDAILKAGVRRVVVACRDPNPQVAGKGLSILAEAGVEVEVGVLSREARWLNR 138
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM+RG PWV K+A+SLD + +L + S+WIT +E+R + H RA S ++TG
Sbjct: 139 GFISRMERGRPWVVAKVAASLDGRIALPDGRSKWITGEEARWEVHRLRAGSDVLVTG 195
>gi|192359452|ref|YP_001983157.1| riboflavin biosynthesis protein RibD [Cellvibrio japonicus Ueda107]
gi|190685617|gb|ACE83295.1| riboflavin biosynthesis protein RibD [Cellvibrio japonicus Ueda107]
Length = 383
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + ++ PNPRVGCV+VK ++II+ G+ G HAE++AL AA Q
Sbjct: 11 MARALRLAERGLYTTMPNPRVGCVLVKNQQIIAEGWHVRAGEGHAEVNALRIAAEQAR-- 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G T PC++ALI +G+ +V+ A+ DPNPLVSG+G+ +L +AGI V
Sbjct: 69 -GATAYVTLEPCNHTGKTGPCSQALIDAGVARVVYAMEDPNPLVSGRGLERLAAAGIEVD 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
L +++A +N GF +RM+R P +R K+A SLD +T++ + S+WITS ++R D
Sbjct: 128 GPLFEEQARALNPGFITRMERKRPLLRCKMAMSLDGRTAMASGESKWITSPKARADVQRL 187
Query: 180 RARSCAILTG 189
RA SCAI+TG
Sbjct: 188 RAASCAIVTG 197
>gi|429092484|ref|ZP_19155112.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter dublinensis 1210]
gi|426742683|emb|CCJ81225.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter dublinensis 1210]
Length = 367
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPRVGCVIVKDGAIVGEGFHLRAGEPHAEVHALRMA---GDRRRGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 76 SHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAESHAILT 192
>gi|432848191|ref|ZP_20080063.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE144]
gi|431402540|gb|ELG85852.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE144]
Length = 367
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARLDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|295096804|emb|CBK85894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 367
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC EALI +G+ +V+ A+ DPNP V G+G+ +L GI V GLM ++A IN
Sbjct: 76 SHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVVGRGLYRLQQEGIDVSHGLMMQDAENIN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMANGESQWITSPQARRDVQRLRAQSHAILT 192
>gi|422804485|ref|ZP_16852917.1| riboflavin biosynthesis protein RibD [Escherichia fergusonii B253]
gi|324114633|gb|EGC08601.1| riboflavin biosynthesis protein RibD [Escherichia fergusonii B253]
Length = 367
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVYALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|317492964|ref|ZP_07951388.1| riboflavin biosynthesis protein RibD [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919086|gb|EFV40421.1| riboflavin biosynthesis protein RibD [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 373
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCVIV I+ GY G HAE+ AL A G +T Y+TLEPC
Sbjct: 24 FTTTPNPNVGCVIVLNDEIVGEGYHLRAGEPHAEVHALHMA---GDKARGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 81 SHHGRTPPCADALVAAGVSRVVAAMQDPNPNVAGRGLFKLQQAGIDVSHGLMMNEAEAVN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P+V++K+A+SLD +T++ + SQWITS SR D +RA+S AIL+
Sbjct: 141 RGFLKRMRTGFPFVQLKMAASLDGRTAMASGESQWITSAASRQDVQRYRAQSSAILS 197
>gi|398948095|ref|ZP_10672575.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM33]
gi|398161103|gb|EJM49346.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM33]
Length = 377
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVQDGQIVGEGWHERAGEPHAEVHAL---RAAGEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ E+ ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGESRKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|451970644|ref|ZP_21923869.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio
alginolyticus E0666]
gi|451933372|gb|EMD81041.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio
alginolyticus E0666]
Length = 375
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ A+ I ++PNP VGCVIV+++ I+ GY G HAE+ A+ A G
Sbjct: 18 MSRAIKLARRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEPHAEVHAMRMA---GEKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AGI V+
Sbjct: 75 VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQMLRDAGIEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N GF M+ G+P+V++K+A+SLD +++L N SQWITS E+R D +
Sbjct: 135 IGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALSNGQSQWITSPEARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RAMSGGILS 203
>gi|399522403|ref|ZP_10763067.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109837|emb|CCH39628.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas pseudoalcaligenes CECT 5344]
Length = 371
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ I+ G+ G HAE+ AL A G
Sbjct: 9 MARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G G+ +L AGI V
Sbjct: 66 RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGSGLLRLAQAGIEVA 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K A SLD +T++ + SQWIT +R +
Sbjct: 126 SGVLESEARALNAGFIKRMESGLPFVRVKSAMSLDGRTAMASGESQWITGPAARAEVQRL 185
Query: 180 RARSCAILTGKN 191
RA+S +L+G +
Sbjct: 186 RAQSSVVLSGAD 197
>gi|421873191|ref|ZP_16304806.1| riboflavin biosynthesis protein RibD [Brevibacillus laterosporus
GI-9]
gi|372457773|emb|CCF14355.1| riboflavin biosynthesis protein RibD [Brevibacillus laterosporus
GI-9]
Length = 384
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +A+Q A+ S +SPNP VG VIVK I+ G G +HAEI AL A G
Sbjct: 23 MKIAIQLAEGASHQTSPNPTVGAVIVKNGSIVGLGAHLRAGESHAEIHALRMA---GEKA 79
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS++G TPPC +AL+ +G+ +V+IAI DPNPLV+GKGVA L AGI V+
Sbjct: 80 AGATVYVTLEPCSHYGKTPPCVQALLDAGVARVVIAIEDPNPLVAGKGVAALKHAGIDVQ 139
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ +KEA E N FF + P+V +K AS+LD K + S+WITS+ +R + H
Sbjct: 140 VGVFEKEARECNESFFHYIHTKRPFVTLKTASTLDGKLATATGDSKWITSELARREVHAE 199
Query: 180 RARSCAILTGKN 191
RA+S AIL G N
Sbjct: 200 RAKSDAILVGIN 211
>gi|426411726|ref|YP_007031825.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. UW4]
gi|426269943|gb|AFY22020.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. UW4]
Length = 377
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV+ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTDPNPRVGCVIVQGGQIVGEGWHERAGEPHAEVHAL---RAAGEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|398874787|ref|ZP_10629987.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM74]
gi|398194010|gb|EJM81095.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM74]
Length = 377
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV+ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGQYTTHPNPRVGCVIVQGGQIVGEGWHERAGEPHAEVHAL---RAAGEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|398942433|ref|ZP_10670275.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM41(2012)]
gi|398160613|gb|EJM48878.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM41(2012)]
Length = 377
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHVRTGEPHAEVHAL---RAAGDKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVHAGVARVVAAMQDPNPSVAGRGMQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|386289015|ref|ZP_10066154.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase [gamma
proteobacterium BDW918]
gi|385278019|gb|EIF41992.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase [gamma
proteobacterium BDW918]
Length = 376
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 131/192 (68%), Gaps = 5/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LALQ A+ ++SPNPRVGCVI ++I+ G+ G HAE++AL AQ
Sbjct: 11 MALALQLAERGRYSTSPNPRVGCVIALHDKVIARGWHIRAGDGHAEVNAL----AQIASA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ T+Y+TLEPCS+ G TPPC + L+++ + +V++A+ DPNPLV+G+G+A+L AG+ V
Sbjct: 67 EDCTIYVTLEPCSHLGRTPPCADRLLEANVARVVVAVEDPNPLVAGQGIARLREAGVQVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM ++A EIN GF R+ G+PW+R+K ASSLD +T++ + SQWIT +R D
Sbjct: 127 VGLMAEQAIEINKGFMRRINGGLPWLRLKSASSLDGRTAMASGESQWITGAAARQDVQRL 186
Query: 180 RARSCAILTGKN 191
RA+SC I++G +
Sbjct: 187 RAQSCVIVSGVD 198
>gi|451967049|ref|ZP_21920296.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Edwardsiella tarda NBRC 105688]
gi|451314202|dbj|GAC65658.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Edwardsiella tarda NBRC 105688]
Length = 371
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCV+V++ +I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 23 FTTTPNPNVGCVLVRDGQIVGEGFHLRAGEPHAEVHALRMA---GERARGATAYVTLEPC 79
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI V+ GLM EA +N
Sbjct: 80 SHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGLYRLQQAGIEVRHGLMLAEAEAVN 139
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P+V++K+ +SLD +T++ + SQWITS +R D +RA+S AIL+
Sbjct: 140 KGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSAAARADVQRYRAQSSAILS 196
>gi|334340276|ref|YP_004545256.1| riboflavin biosynthesis protein RibD [Desulfotomaculum ruminis DSM
2154]
gi|334091630|gb|AEG59970.1| riboflavin biosynthesis protein RibD [Desulfotomaculum ruminis DSM
2154]
Length = 377
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ A+ +SPNP VG VIVKE ++I G+ GG HAE+ AL+ A Q D
Sbjct: 10 MQMALELAARARGRTSPNPLVGAVIVKEGQVIGKGFHAKAGGAHAEVVALMEAGEQARD- 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPC ++G T PCTEA+IK+GIK+V+ A+ DPNPLV+GKG+ L AG+ VK
Sbjct: 69 --ATLYVTLEPCCHYGRTGPCTEAVIKAGIKRVVAAMTDPNPLVAGKGLEVLKKAGVEVK 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++EA +N F + P+V +K A+SLD K + SQWIT K +R H
Sbjct: 127 AGVLEQEAMHLNEAFIKYITTKRPFVILKSATSLDGKIATAGGESQWITGKAAREQGHWL 186
Query: 180 RARSCAILTGKN 191
R R AIL G N
Sbjct: 187 RDRVDAILVGVN 198
>gi|392940042|ref|ZP_10305686.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
siderophilus SR4]
gi|392291792|gb|EIW00236.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
siderophilus SR4]
Length = 360
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNP VG VIVK +II GY + GG HAE++AL NA DV ST+++TLEPCS+
Sbjct: 19 TNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVE---DVKGSTMFVTLEPCSH 75
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
+G TPPC E +IKSGIK+V IA+ DPNP VSG G+ +L AGI V+ G+M+KEA ++N
Sbjct: 76 YGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVQVGMMEKEARKLNEI 135
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
F + IP+V +K A S+D K + YN +S+WIT+++SR +H R R AI+ G N
Sbjct: 136 FVKYITTKIPFVILKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRGRVSAIMVGVN 193
>gi|119945176|ref|YP_942856.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
and 5-amino-6-(5-phosphoribosylamino) uracil reductase
[Psychromonas ingrahamii 37]
gi|119863780|gb|ABM03257.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Psychromonas ingrahamii 37]
Length = 387
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 115/176 (65%), Gaps = 3/176 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
SSPNP VGCVIV I+ GY + G HAE++AL A + +T Y+TLEPCS+
Sbjct: 28 SSPNPNVGCVIVANNIIVGEGYHQKAGLGHAEVNALAIAKDKAM---GATCYVTLEPCSH 84
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
FG TPPC AL K+GIK+VIIA+ DPNP V+G G+ L AGI V GL++ EA ++N G
Sbjct: 85 FGRTPPCALALTKAGIKRVIIAMVDPNPKVAGDGIKILEKAGIKVDLGLLKNEAMDLNRG 144
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F RMQ P V +K+ASSLD KT+L N SQWIT +R D +RA A+LTG
Sbjct: 145 FIKRMQVKEPRVTVKLASSLDGKTALKNGQSQWITGPAARCDVQYFRALQSAVLTG 200
>gi|33519699|ref|NP_878531.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Candidatus Blochmannia floridanus]
gi|33517362|emb|CAD83747.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Candidatus Blochmannia floridanus]
Length = 378
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 119/175 (68%), Gaps = 3/175 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
+ PNP VGCVIVKE ++I GY G +HAEI AL A G +TVY+TLEPCS+
Sbjct: 28 TMPNPNVGCVIVKENKVIGEGYHIRAGEDHAEIHALRIA---GDSARGATVYVTLEPCSH 84
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
+G TPPCT ALI SGIK V+I++ DP+P + G+GV L +GI V+ LM EA IN G
Sbjct: 85 YGRTPPCTTALINSGIKCVVISMLDPDPEIKGRGVRLLQESGILVRHSLMLSEAEHINKG 144
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
F R++ G+PW+++K+A+SLD +T++ S+WITS +SR D +RA S IL+
Sbjct: 145 FIKRIRTGMPWIKVKLAASLDGRTAMKTGESKWITSVQSRQDVQCFRAESDVILS 199
>gi|254428944|ref|ZP_05042651.1| riboflavin biosynthesis protein RibD [Alcanivorax sp. DG881]
gi|196195113|gb|EDX90072.1| riboflavin biosynthesis protein RibD [Alcanivorax sp. DG881]
Length = 387
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ ALQ A+ + + PNPRVGCV+V+ ++ G+ G HAE AL AA G
Sbjct: 11 MSRALQLARHGLYTTDPNPRVGCVLVRGGAVVGEGFHARAGELHAERHAL---AAAGDRA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC +AL+++G+ +V+ A+ DPNP V+G+G+ +L AGI+V
Sbjct: 68 QGATAYVTLEPCSHTGRTGPCADALVEAGVARVVAAMEDPNPQVAGQGLQRLADAGIAVA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A ++N GF +RM R P++R+KIA+S+D +T++ + SQWIT +R D
Sbjct: 128 SGLLETQARDLNPGFIARMTRQRPYIRIKIAASVDGRTAMASGESQWITGPAAREDVQRL 187
Query: 180 RARSCAILTG 189
RARS A++TG
Sbjct: 188 RARSSAVVTG 197
>gi|239827589|ref|YP_002950213.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70]
gi|239807882|gb|ACS24947.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70]
Length = 361
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ AK I +SPNP VG V+VK+ I+ G G HAE+ A+ A G
Sbjct: 8 MRLAIEIAKAGIGQTSPNPVVGAVVVKDGEIVGFGAHLKAGELHAEVHAIRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
STVY+TLEPCS++G TPPC + L+++G+++V+IA DPNPLV+GKG+ +L SAGI VK
Sbjct: 65 KGSTVYVTLEPCSHYGKTPPCADLLVETGVQRVVIATTDPNPLVAGKGIEKLRSAGIDVK 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++EA E+N FF + P+V +K ASSLD K + S+WITS+ +R D H +
Sbjct: 125 LGVLKEEADELNRVFFHYIAAKTPFVTLKYASSLDGKIATTTGESKWITSEAAREDVHRY 184
Query: 180 RARSCAILTGKN 191
RA AIL G N
Sbjct: 185 RAVHDAILVGVN 196
>gi|440730120|ref|ZP_20910217.1| riboflavin biosynthesis protein RibD [Xanthomonas translucens
DAR61454]
gi|440379564|gb|ELQ16155.1| riboflavin biosynthesis protein RibD [Xanthomonas translucens
DAR61454]
Length = 377
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ ++ G+ + GG HAE+ A G
Sbjct: 22 MAQALRLAERGAYTTRPNPMVGCVIVRDGEVVGEGFHQRAGGPHAEV---FALRAAGARA 78
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++ Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V+G G A L AGI V+
Sbjct: 79 RGASAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGFALLREAGIEVR 138
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM+ +A +N GF +R++RG PW+R+K+ +SLD +T+L + S+WIT +R D W
Sbjct: 139 SGLMEAQARALNRGFLARVERGRPWLRVKLGASLDGRTALASGESKWITGAAARQDVQQW 198
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 199 RARAGAILTG 208
>gi|409422473|ref|ZP_11259570.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. HYS]
Length = 376
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+ + S+ PNPRVGCVIV++ +++ G+ G HAE+ AL A G
Sbjct: 13 MARAIELARKGLYSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVYALRQA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLKRLADAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARTLNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|167565784|ref|ZP_02358700.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis
EO147]
Length = 357
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVI +++++ G+ + G HAE+ AL A G
Sbjct: 1 MAHALRLAEQGLYTTRPNPRVGCVIAHDEQVLGTGWHRRAGEPHAEVHALREA---GERA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC AL+ +G+ +V+IA DP V+G+G A+L AGI V+
Sbjct: 58 RGATAYVTLEPCAHYGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAARLADAGIVVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QGLM+ EA E+NIGFFSR++RG PW R K+ S+D + + T ESR+D W
Sbjct: 118 QGLMEAEARELNIGFFSRIERGRPWTRAKLILSIDGPLDGIDRTVLDATESESRDDVRHW 177
Query: 180 RARSCAILTGKNI 192
RARS +L +
Sbjct: 178 RARSSVVLAPHGV 190
>gi|319760369|ref|YP_004124307.1| riboflavin biosynthesis protein RibD [Candidatus Blochmannia vafer
str. BVAF]
gi|318039083|gb|ADV33633.1| riboflavin biosynthesis protein RibD [Candidatus Blochmannia vafer
str. BVAF]
Length = 383
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
++ A Q A K + PNP VGCVIVK+ +I GY G NHAEI+AL + G
Sbjct: 13 LSRAFQLARKGRFTTMPNPNVGCVIVKDNHVIGEGYHMRAGENHAEINAL---SVAGNFA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPCT ALIKSGIK+V++++ DP+P ++G+G+ L +GI V
Sbjct: 70 KGATAYVTLEPCSHYGRTPPCTTALIKSGIKRVVVSMLDPHPDLTGRGIQLLKQSGILVS 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+M EA IN GF R++ G+PW+++K+ASSLD + ++ + S+WITS +SR D +
Sbjct: 130 HSIMLSEAESINKGFIKRIRTGMPWIKLKLASSLDGRVAMSSGESKWITSVQSRQDVQCF 189
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 190 RAESDVILS 198
>gi|379009545|ref|YP_005267358.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
gi|375158069|gb|AFA41135.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
Length = 380
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
++ A + A+L +SPNP VGCVIVK II GY K G +HAEI AL + V
Sbjct: 13 LSRAFELARLGRFTTSPNPNVGCVIVKNNCIIGEGYHKKSGSDHAEISALKSTKTC---V 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
STVY+TLEPCSY G TP C AL+K+ +KKVI + DPNP VSGKG L +GI VK
Sbjct: 70 QGSTVYVTLEPCSYHGKTPSCAHALVKAKVKKVIASTIDPNPKVSGKGFEILKKSGIEVK 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
MQ A +N+GFF RM+ GIPW+++K+A++LD +T+ S+WITS +SR +
Sbjct: 130 YNFMQNVAKNLNVGFFKRMKSGIPWIKLKLAATLDGRTATKYGVSKWITSLKSRQNVQEL 189
Query: 180 RARSCAILT 188
RA S AIL+
Sbjct: 190 RAESDAILS 198
>gi|152998046|ref|YP_001342881.1| riboflavin biosynthesis protein RibD [Marinomonas sp. MWYL1]
gi|150838970|gb|ABR72946.1| riboflavin biosynthesis protein RibD [Marinomonas sp. MWYL1]
Length = 384
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q AK + PNPRVGCV+VK+++II G+ G HAE++AL +A +D
Sbjct: 10 MAKAIQLAKKGRYTTHPNPRVGCVLVKDQQIIGQGFHVKAGEGHAEVNALADAK---HDA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALIK+G+ +V+ + DPNP VSG G+A++ AGI +
Sbjct: 67 VGATAYVTLEPCSHQGKTPPCADALIKAGVARVVYGMQDPNPEVSGNGLAKIKKAGIEII 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+++ + +N GF RM+ G+P+VR+K+A S+D +T++ + SQWIT +R D
Sbjct: 127 GPILESDCEALNPGFIKRMREGLPYVRVKLAMSMDGRTAMESGESQWITDSAARLDVQRL 186
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 187 RAQSDAIVTG 196
>gi|423097585|ref|ZP_17085381.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
Q2-87]
gi|397886429|gb|EJL02912.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
Q2-87]
Length = 377
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 15 MARALELARRGHYTTHPNPRVGCVIVRDGEVVGEGWHIRAGEPHAEVHAL---RAAGVKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|386346215|ref|YP_006044464.1| riboflavin biosynthesis protein RibD [Spirochaeta thermophila DSM
6578]
gi|339411182|gb|AEJ60747.1| riboflavin biosynthesis protein RibD [Spirochaeta thermophila DSM
6578]
Length = 362
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 123/177 (69%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+SPNP VG V+VK+ R++ G+ + G HAE+ AL A G + + +Y+TLEPC
Sbjct: 22 RTSPNPMVGAVVVKDGRVVGEGFHERAGLPHAEVTALSEA---GGEARGAEMYVTLEPCC 78
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPCT+A++K+G+++V++A DPNP V+GKG++ L AG+ V+ G++ +EA +N
Sbjct: 79 HWGRTPPCTDAILKAGVRRVVVACRDPNPQVAGKGLSILAEAGVEVEVGVLSREARWLNR 138
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF SRM+RG PWV K+A+SLD + +L + S+WIT + SR + H RA S ++TG
Sbjct: 139 GFISRMERGRPWVVAKVAASLDGRIALPDGRSKWITGEASRREVHRLRAGSDVLVTG 195
>gi|388258756|ref|ZP_10135931.1| riboflavin biosynthesis protein RibD [Cellvibrio sp. BR]
gi|387937515|gb|EIK44071.1| riboflavin biosynthesis protein RibD [Cellvibrio sp. BR]
Length = 374
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Query: 16 PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSYFG 75
PNPRVGCV+VK+ +II+ G+ G HAE++AL A G + +T Y++LEPCS+ G
Sbjct: 27 PNPRVGCVLVKDGQIIAEGWHIRAGEAHAEVNAL---RAAGENARGATAYVSLEPCSHTG 83
Query: 76 YTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIGFF 135
T PC++ALI +G+ +V+ A+ DPNPLVSG G+A L +AG+ V L++ +A +N G+
Sbjct: 84 RTGPCSQALIDAGVARVVYAMEDPNPLVSGDGIAMLRAAGVQVDGSLLEDDARALNPGYI 143
Query: 136 SRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
RM+R +P+VR K+A SLD +T++ + S+WIT +R D RARSCAI++G
Sbjct: 144 KRMERKLPFVRCKLAMSLDGRTAMESGESKWITGPNARADVQRLRARSCAIISG 197
>gi|261341007|ref|ZP_05968865.1| riboflavin biosynthesis protein RibD [Enterobacter cancerogenus
ATCC 35316]
gi|288316872|gb|EFC55810.1| riboflavin biosynthesis protein RibD [Enterobacter cancerogenus
ATCC 35316]
Length = 367
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC EALI +G+ +V+ ++ DPNP V+G+G+ +L GI V GLM ++A +N
Sbjct: 76 SHHGRTPPCCEALIAAGVSRVVASMQDPNPQVAGRGLYRLQQEGIDVSHGLMMQDAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQRLRAQSHAILT 192
>gi|395232631|ref|ZP_10410881.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter sp. Ag1]
gi|394733033|gb|EJF32672.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter sp. Ag1]
Length = 372
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AK ++PNP VGCVIVK+ I+ G+ G HAE+ AL A G
Sbjct: 8 MARALELAKRGRFTTAPNPNVGCVIVKDGNIVGEGFHFRAGEPHAEVHALRMA---GEQA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 65 RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVS 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G P++++K+ +SLD +T++ + S+WITS ++R D
Sbjct: 125 HGLMMNEAEALNRGFLKRMRTGFPFIQLKLGASLDGRTAMASGESKWITSPQARRDVQRQ 184
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 185 RAQSAAILS 193
>gi|262370188|ref|ZP_06063515.1| pyrimidine deaminase [Acinetobacter johnsonii SH046]
gi|262315227|gb|EEY96267.1| pyrimidine deaminase [Acinetobacter johnsonii SH046]
Length = 367
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++ PNP VGCVIVK+ ++ GY G HAE+ A+ A G +T Y+TLEPC+
Sbjct: 29 STKPNPNVGCVIVKDGLLLGTGYHPQAGQLHAEVFAMREA---GEQTQGATAYVTLEPCA 85
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC + L+++G+ +V+IA DPNPLV+GKGV L AGI V G+ Q EA+++N
Sbjct: 86 HYGRTPPCAKGLVEAGVARVVIACPDPNPLVAGKGVQILKEAGIEVDVGICQTEAHQLNA 145
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF M G+P+VR+K+ASSLD +T++ + S+WIT +R D +RA S ++TG
Sbjct: 146 GFLKAMATGMPYVRLKVASSLDGRTAMASGESKWITGPAARLDVQHFRAISGVVITG 202
>gi|153834818|ref|ZP_01987485.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
gi|148868746|gb|EDL67820.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
Length = 374
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL AK I ++PNP VGCVIV++ I+ G+ G HAE+ A+ A G
Sbjct: 18 MSRALMLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMA---GDKT 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LI++ + +V+ A+ DPNP V+G+G L AG+ V+
Sbjct: 75 QGATAYVTLEPCSHYGRTPPCAEGLIEAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA E+N GF MQ G+P++++K+A+SLD +++L N SQWITS ++R D +
Sbjct: 135 VGLLESEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RALSGGILS 203
>gi|27904888|ref|NP_778014.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera
aphidicola str. Bp (Baizongia pistaciae)]
gi|46396884|sp|Q89AB0.1|RIBD_BUCBP RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName:
Full=Diaminohydroxyphosphoribosylaminopyrimidine
deaminase; Short=DRAP deaminase; AltName:
Full=Riboflavin-specific deaminase; Includes: RecName:
Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
AltName: Full=HTP reductase
gi|27904286|gb|AAO27119.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera
aphidicola str. Bp (Baizongia pistaciae)]
Length = 372
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK S+ +SPNP VGC+IV I+ G+ K G HAEI AL G
Sbjct: 7 MKKAIKLAKKGSLTTSPNPNVGCIIVNNNIIVGSGWHKKTGMKHAEIYAL---KTSGEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T YITLEPCS+FG TPPC AL K GI +V+IA DPNP VSG GV L GI V
Sbjct: 64 KGATAYITLEPCSHFGKTPPCCVALTKYGISRVVIATLDPNPKVSGNGVKWLKKHGILVT 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G + KE+ +IN GFF RM GIPW+++K+ASS+D +T+L N S+WITS ++R+D
Sbjct: 124 IGTLSKESIKINKGFFQRMTTGIPWIKLKLASSIDGRTALNNGKSKWITSDKARHDVQHV 183
Query: 180 RARSCAILT 188
R +S AI++
Sbjct: 184 REKSDAIIS 192
>gi|254507822|ref|ZP_05119952.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus 16]
gi|219549195|gb|EED26190.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus 16]
Length = 368
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A+ AK I ++PNP VGCVI + I+ G+ G HAE+ AL A G
Sbjct: 12 MSRAIWLAKGGIYTTAPNPNVGCVITQNGDIVGEGFHYRAGEPHAEVHALRMA---GDKS 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI V+
Sbjct: 69 VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVAGRGIQMLRDAGIEVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N F RMQ G+P+V++K+A+SLD +T+L N SQWITS+ +R D +
Sbjct: 129 VGLLEQDAIALNPSFIKRMQTGLPFVQLKMAASLDGQTALANGKSQWITSEAARRDVQRY 188
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 189 RAQSGAILS 197
>gi|398842987|ref|ZP_10600152.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM102]
gi|398104655|gb|EJL94786.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM102]
Length = 377
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCV+V++ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHVRTGEPHAEVHALRGA---GDKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 192 RAEASVVLTGAD 203
>gi|365838367|ref|ZP_09379712.1| riboflavin biosynthesis protein RibD [Hafnia alvei ATCC 51873]
gi|364559916|gb|EHM37877.1| riboflavin biosynthesis protein RibD [Hafnia alvei ATCC 51873]
Length = 373
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCVIV I+ GY G HAE+ AL A G +T Y+TLEPC
Sbjct: 24 FTTTPNPNVGCVIVLNDEIVGEGYHLRAGEPHAEVHALRMA---GDKARGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM EA +N
Sbjct: 81 SHHGRTPPCADALVAAGVSRVVAAMQDPNPNVAGRGLFKLQQAGIDVSHGLMMNEAEAVN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P+V++K+A+SLD +T++ + SQWITS +R D +RA+S AIL+
Sbjct: 141 RGFLKRMRTGFPFVQLKMAASLDGRTAMASGESQWITSAAARQDVQRYRAQSSAILS 197
>gi|429331890|ref|ZP_19212630.1| riboflavin biosynthesis protein RibD [Pseudomonas putida CSV86]
gi|428763401|gb|EKX85576.1| riboflavin biosynthesis protein RibD [Pseudomonas putida CSV86]
Length = 376
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + S+ PNPRVGCVIV++ RI+ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGLYSTHPNPRVGCVIVRDGRIVGEGWHVRAGEPHAEVHALREA---GELA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+ +G+ +V+ A+ DPNP V+G G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVNAGVSRVVAAMQDPNPQVAGNGLKRLADAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ +P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAEARALNPGFLKRMEHRLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 190 RARSSVVLT 198
>gi|365104924|ref|ZP_09334316.1| riboflavin biosynthesis protein RibD [Citrobacter freundii
4_7_47CFAA]
gi|363643865|gb|EHL83169.1| riboflavin biosynthesis protein RibD [Citrobacter freundii
4_7_47CFAA]
Length = 367
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 8 AKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
A+ + PNP VGCVIVK+ I+ GY G HAE+ AL A G + Y+T
Sbjct: 15 ARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMA---GEKAQGAIAYVT 71
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V GLM E
Sbjct: 72 LEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEV 131
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA+S AIL
Sbjct: 132 EQLNKGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQSHAIL 191
Query: 188 T 188
T
Sbjct: 192 T 192
>gi|386702783|ref|YP_006166620.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli KO11FL]
gi|383394310|gb|AFH19268.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli KO11FL]
Length = 361
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIV + I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVIDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQ 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|339009836|ref|ZP_08642407.1| riboflavin biosynthesis protein RibD [Brevibacillus laterosporus
LMG 15441]
gi|338773106|gb|EGP32638.1| riboflavin biosynthesis protein RibD [Brevibacillus laterosporus
LMG 15441]
Length = 384
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +A+Q A+ S +SPNP VG VI K I+ G G +HAEI AL A G
Sbjct: 23 MKIAIQLAEGASHQTSPNPTVGAVIAKNGSIVGLGAHLRAGESHAEIHALRMA---GEKA 79
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS++G TPPC +AL+ +G+ +V+IAI DPNPLV+GKGVA L AGI V+
Sbjct: 80 AGATVYVTLEPCSHYGKTPPCVQALLDAGVARVVIAIEDPNPLVAGKGVATLKHAGIDVQ 139
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++KEA E N FF + P+V +K AS+LD K + S+WITS+ +R + H
Sbjct: 140 VGVLEKEARECNESFFHYIHTKRPFVTLKTASTLDGKLATATGDSKWITSELARREVHAE 199
Query: 180 RARSCAILTGKN 191
RA+S AIL G N
Sbjct: 200 RAKSDAILVGIN 211
>gi|398977344|ref|ZP_10687061.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM25]
gi|398138088|gb|EJM27118.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM25]
Length = 377
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV++ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHERAGEPHAEVHAL---RAAGELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVGRVVAAMRDPNPQVAGRGLQRLADAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEAEARKLNQGFLKRMEHGSPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|410630842|ref|ZP_11341527.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
arctica BSs20135]
gi|410149540|dbj|GAC18394.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Glaciecola
arctica BSs20135]
Length = 378
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 123/191 (64%), Gaps = 5/191 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRII-SCGYTKSPGGNHAEIDALLNAAAQGYD 58
M A+Q AK ++PNP VGCVI + +I G+ K G HAE+ AL A G
Sbjct: 12 MVRAIQLAKRGEYTTTPNPNVGCVISSSQGVILGEGWHKKAGTPHAEVHALQQA---GNK 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+T Y+TLEPCS++G TPPC ++LI +G+ +V+ A+ DPNP VSG G+A+L AGI
Sbjct: 69 AQGATAYVTLEPCSHYGRTPPCADSLIAAGVTRVVAAMVDPNPQVSGNGLAKLQEAGIKT 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ GL+Q A ++N GF RM+ G PWV +K+A+SLD KT+L N SQWIT +R D
Sbjct: 129 EHGLLQTSAEQLNRGFIKRMRTGKPWVTVKLAASLDGKTALGNGLSQWITGPLARQDVQR 188
Query: 179 WRARSCAILTG 189
RA+ CAIL+G
Sbjct: 189 HRAKCCAILSG 199
>gi|424789834|ref|ZP_18216452.1| Riboflavin biosynthesis protein RibD [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422798352|gb|EKU26460.1| Riboflavin biosynthesis protein RibD [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 372
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ S+ PNP VGCVIV++ ++ G+ + GG HAE+ A G
Sbjct: 17 MAQALRLAERGAYSTRPNPMVGCVIVRDGEVVGEGFHQRAGGPHAEV---FALRAAGARA 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++ Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V+G G A L AGI V+
Sbjct: 74 RGASAYVTLEPCAHYGRTPPCALALIEAGVTRVLAAMADPFPQVNGGGFALLREAGIEVR 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT +R D W
Sbjct: 134 FGLMDAQARALNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITGAAARQDVQHW 193
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 194 RARAGAILTG 203
>gi|433676913|ref|ZP_20508963.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Xanthomonas translucens pv. translucens DSM 18974]
gi|430817967|emb|CCP39302.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Xanthomonas translucens pv. translucens DSM 18974]
Length = 372
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ ++ G+ + GG HAE+ A G
Sbjct: 17 MAQALRLAERGAYTTRPNPMVGCVIVRDGEVVGEGFHQRAGGPHAEV---FALRAAGARA 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++ Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V+G G A L AGI V+
Sbjct: 74 RGASAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGFALLREAGIEVR 133
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT +R D W
Sbjct: 134 FGLMDAQARALNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITGAAARQDVQQW 193
Query: 180 RARSCAILTGKN 191
RAR+ AILTG
Sbjct: 194 RARAGAILTGAG 205
>gi|401762510|ref|YP_006577517.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174044|gb|AFP68893.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 367
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L GI V GLM ++A IN
Sbjct: 76 SHHGRTPPCCDALIAAGVSRVVASMQDPNPQVAGRGLYRLQQEGIDVSHGLMMQDAEAIN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQRLRAQSHAILT 192
>gi|359785931|ref|ZP_09289076.1| riboflavin biosynthesis protein RibD [Halomonas sp. GFAJ-1]
gi|359296758|gb|EHK61001.1| riboflavin biosynthesis protein RibD [Halomonas sp. GFAJ-1]
Length = 389
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 130/195 (66%), Gaps = 9/195 (4%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVK-----EKRIISCGYTKSPGGNHAEIDALLNAAA 54
M ALQ AK + + PNPRVGCVIV+ E R++ G+ S GG HAEI AL NAAA
Sbjct: 18 MARALQLAKQGLYTTDPNPRVGCVIVRYDESDEGRVVGEGFHISAGGPHAEIHAL-NAAA 76
Query: 55 QGYDVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISA 114
G +T Y+TLEPCS+ G T PC AL ++ + +V++A+ DPNP VSG+G+ +L +
Sbjct: 77 -GL-ARGATAYVTLEPCSHTGRTGPCAVALAEAKVSRVVVAMVDPNPQVSGQGIKRLQAD 134
Query: 115 GISVKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRN 174
G++V GL++ +A +N GF SRMQ P+VR+K+A SLD +T++ + SQWIT E+R+
Sbjct: 135 GVTVDVGLLEADARALNPGFISRMQHKRPFVRLKMAMSLDGRTAMGSGESQWITGPEARS 194
Query: 175 DSHIWRARSCAILTG 189
RARS AIL+G
Sbjct: 195 QVQRLRARSSAILSG 209
>gi|444377320|ref|ZP_21176552.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Enterovibrio
sp. AK16]
gi|443678610|gb|ELT85278.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Enterovibrio
sp. AK16]
Length = 372
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK I ++PNP VGCV+ + I+ G+ G HAE+ AL A G +
Sbjct: 10 MLRAIELAKRGIYTTAPNPSVGCVVTQGDDIVGEGFHFRAGEPHAEVHAL---RAAGENA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ ++ GI V
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCADALIAAGVSRVVCAMVDPNPKVAGRGIQRMRDEGIQVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLMQ +A +N GF M+ G+P+V++K+ASSLD +T+L N S+WIT E+R D ++
Sbjct: 127 VGLMQAQAEALNPGFIKVMKTGLPFVQLKLASSLDGRTALANGQSKWITGDEARADVQVF 186
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 187 RAQAGAILS 195
>gi|398860823|ref|ZP_10616467.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM79]
gi|398234263|gb|EJN20146.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM79]
Length = 377
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCV+V++ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHVRTGEPHAEVHAL---RAAGDKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 192 RAEASVVLTGAD 203
>gi|398918102|ref|ZP_10658339.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM49]
gi|398171894|gb|EJM59784.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM49]
Length = 377
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV+ +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVQGGQIVGEGWHVRAGEPHAEVHAL---RAAGEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLESEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|222528581|ref|YP_002572463.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii
DSM 6725]
gi|222455428|gb|ACM59690.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii
DSM 6725]
Length = 371
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ AK S PNPRVGCVIVK +I GY + G HAE+ A+ +A GY +
Sbjct: 10 MNMALELAKKASPLVLPNPRVGCVIVKNGTVIGKGYHQKYGEKHAEVLAIEDAIKNGYLL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+T+Y+TLEPC +FG PPCT+A+IKSGIKKV++A DPNPLV+GKG+ L GI V
Sbjct: 70 KNATMYVTLEPCCHFGKQPPCTDAIIKSGIKKVVVATKDPNPLVNGKGIQILKQHGIEVI 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G++QKEA IN FF M+ GIP++ +K+A S+D K + +N ++E H
Sbjct: 130 EGVLQKEAESINKDFFKYMKTGIPYIAIKVAQSIDGKIATPSNKRFLFNTEEENVFVHSL 189
Query: 180 RARSCAILTGKN 191
R + AIL N
Sbjct: 190 RQKYMAILVSVN 201
>gi|37527755|ref|NP_931100.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36787191|emb|CAE16271.1| riboflavin biosynthesis protein [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase)] [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 369
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ +SPNP VGCVIV + +I+ G+ G HAE+ AL A G
Sbjct: 8 MARALELARQGRFTTSPNPNVGCVIVHDGQIVGEGFHLRSGEPHAEVYALQIA---GDKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI+V+
Sbjct: 65 KGATVYVTLEPCSHHGKTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLYKLQQAGIAVE 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA +N GF RM+ G P++++K+A+SLD +T+L + S+WITS ++R D +
Sbjct: 125 HGLMMEEAESLNRGFLKRMRTGFPYIQLKMATSLDGRTALASGESKWITSPQARCDVQKF 184
Query: 180 RARSCAILT 188
RA+ AIL+
Sbjct: 185 RAQCSAILS 193
>gi|289432876|ref|YP_003462749.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT]
gi|288946596|gb|ADC74293.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT]
Length = 365
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINS-SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL AKL+I SPNP VG VIVK ++ G+T+ PGG+HAEI AL AA +
Sbjct: 4 MSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEK---A 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPC + G TPPCT ++I SGIK+V IA D NPLVSGKG +L +AGI V
Sbjct: 61 KGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSGKGKKELEAAGIKVH 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M++EA ++N +F + G+P+V K A SLD KT S+WI+++ESR+ +H
Sbjct: 121 LGMMEREARQMNEAYFKHVTTGMPFVTAKYAMSLDGKTGTRTGDSKWISNEESRHFAHYI 180
Query: 180 RARSCAILTGKN 191
R S I+ G N
Sbjct: 181 RHISDVIMAGLN 192
>gi|422016452|ref|ZP_16363035.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia burhodogranariea DSM 19968]
gi|414092651|gb|EKT54324.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia burhodogranariea DSM 19968]
Length = 371
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A++ +SPNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MSRALELAQIGCFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMA---GEKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ L AGI +
Sbjct: 66 TGATAYVTLEPCSHHGRTPPCAEALINAGVSRVVAAMQDPNPEVAGRGLYMLSKAGIETE 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +A +N GF RM+ P++++K+A+SLD KT+L + S+WITS +R D +
Sbjct: 126 TGVLMDQAEALNRGFLKRMRTAFPYIQLKLAASLDGKTALESGESKWITSAAARRDVQVL 185
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 186 RAQASAILS 194
>gi|254491989|ref|ZP_05105167.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxidans
DMS010]
gi|224462804|gb|EEF79075.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxydans
DMS010]
Length = 368
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A+ + + PNPRVGCVIVK II G+ G HAE++A+ A G+
Sbjct: 8 MARAIQLAERGLYTTDPNPRVGCVIVKNDEIIGEGWHMRAGEGHAEVNAI---QAAGHAA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+FG TPPC +ALI + +K+V +A+ DPNP+VSG G+ +L AG+ V
Sbjct: 65 EGADCYVTLEPCSHFGRTPPCVDALITAKVKRVFVAMTDPNPVVSGSGITRLRQAGVEVH 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
++ ++ ++N GF RM+ G P++R K+A SLD +T++ + S+WIT E+R D
Sbjct: 125 TDILAAQSEKLNPGFCQRMRIGKPFIRSKLAMSLDGRTAMASGESKWITGPEARADVQKL 184
Query: 180 RARSCAILTG 189
RARS AI+TG
Sbjct: 185 RARSSAIMTG 194
>gi|452943703|ref|YP_007499868.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Hydrogenobaculum sp. HO]
gi|452882121|gb|AGG14825.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Hydrogenobaculum sp. HO]
Length = 356
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL++A K + PNP VG +IVK+ +I+S G K G +HAEI AL NA DV
Sbjct: 8 MKLALEEAYKYKGQTHPNPAVGALIVKDGKILSIGAHKKAGTDHAEIVALKNAQE---DV 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPCS+ G TPPC A+I SGIKKV+I DPNP VSGKG+ L S+GI V+
Sbjct: 65 KGATMYVTLEPCSFHGKTPPCCPAIISSGIKKVVIGSVDPNPKVSGKGIEWLKSSGIEVE 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++E ++N FF + R P+V +K A SLD K + N S+WI+S+++R SHI+
Sbjct: 125 VGILKEECDKLNEDFFVYITRKRPFVTLKCAMSLDGKLAKENKESKWISSEKARKISHIY 184
Query: 180 RARSCAILTGKN 191
R S AIL G N
Sbjct: 185 RKHSSAILVGIN 196
>gi|388547633|ref|ZP_10150895.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. M47T1]
gi|388274233|gb|EIK93833.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. M47T1]
Length = 379
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+ + + PNPRVGCVIV++ +++ G+ G HAE+ AL A G
Sbjct: 15 MARAIELARRGLYTTHPNPRVGCVIVRDGQVVGEGWHVRAGEGHAEVHALRQA---GELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L GI V
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGLARVVAAMQDPNPEVAGRGLKRLADVGIEVL 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM++G+P+VR+K+A SLD +T++ + S+WIT +R+
Sbjct: 132 SGVLEGEARGLNPGFLKRMEQGVPFVRVKLAMSLDGRTAMASGESKWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RARS A+LT +
Sbjct: 192 RARSSAVLTSAD 203
>gi|70732823|ref|YP_262590.1| riboflavin biosynthesis protein RibD [Pseudomonas protegens Pf-5]
gi|68347122|gb|AAY94728.1| riboflavin biosynthesis protein RibD [Pseudomonas protegens Pf-5]
Length = 377
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K ++ PNPRVGCVIV++ +++ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGRYSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRAA---GELA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIDTH 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA IN GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 GGVLEGEARAINKGFLKRMEHGLPYVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA S +LTG +
Sbjct: 192 RAESSVVLTGAD 203
>gi|262376969|ref|ZP_06070195.1| riboflavin biosynthesis protein RibD [Acinetobacter lwoffii SH145]
gi|262308007|gb|EEY89144.1| riboflavin biosynthesis protein RibD [Acinetobacter lwoffii SH145]
Length = 362
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++ PNP VGCVIVK+ +I G+ G HAE+ AL A Q +T Y+TLEPC+
Sbjct: 24 STKPNPNVGCVIVKDGIVIGEGFHPQAGQPHAEVFALRQAGEQAR---GATAYVTLEPCA 80
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC + L+++G+ KV++A DPNPLV+GKGV L A I V+ G+ + EA+++N
Sbjct: 81 HYGRTPPCAKGLVEAGVAKVVVACPDPNPLVAGKGVQILKDAEIEVEIGICEDEAHQLNQ 140
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF M G+P++R+KIASSLD +T++ + S+WIT +R D WRA S A++TG
Sbjct: 141 GFLKAMATGMPYMRLKIASSLDGRTAMASGESKWITGLAARQDVQHWRAISGAVITG 197
>gi|422336378|ref|ZP_16417351.1| riboflavin biosynthesis protein ribD [Aggregatibacter aphrophilus
F0387]
gi|353346564|gb|EHB90849.1| riboflavin biosynthesis protein ribD [Aggregatibacter aphrophilus
F0387]
Length = 374
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +II G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC + L+ +G++ VI A+ DPNPLV+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCAHYGQTPPCAKGLVDAGVRNVIAAMCDPNPLVAGKGLGILADAGIESA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++ A E+N GF RM+ G P+V++K+A S+D KT++ N S+WIT ++R D +
Sbjct: 130 VGLLKENAEELNKGFLKRMRTGRPFVQLKLAMSIDGKTAMANGESKWITGAQARADVQQY 189
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 190 RAKASAILS 198
>gi|333892348|ref|YP_004466223.1| riboflavin biosynthesis protein RibD [Alteromonas sp. SN2]
gi|332992366|gb|AEF02421.1| riboflavin biosynthesis protein RibD [Alteromonas sp. SN2]
Length = 404
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 115/182 (63%), Gaps = 4/182 (2%)
Query: 9 KLSINSSPNPRVGCVIVKEKRI-ISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYIT 67
K +SPNPRVGCVIV I G+ G HAEI AL A G +T Y+T
Sbjct: 51 KGQFTTSPNPRVGCVIVNNNNDSIGQGFHVQAGTPHAEIHALREA---GKKAKGATAYVT 107
Query: 68 LEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEA 127
LEPCS++G TPPC EALIK+ + +V+IA+ DPNP VSG G+ L AGI V +M E+
Sbjct: 108 LEPCSHYGRTPPCAEALIKAQVSRVVIAMTDPNPNVSGNGIRMLQDAGIEVSSDIMSAES 167
Query: 128 YEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAIL 187
+N GF RM G P+VR+K+ S+D K +L N +SQWIT E+R D +RA+SCA+L
Sbjct: 168 AALNPGFIKRMLTGKPYVRVKLGISVDGKIALQNGNSQWITGPEARRDVQHYRAQSCAVL 227
Query: 188 TG 189
TG
Sbjct: 228 TG 229
>gi|269965078|ref|ZP_06179243.1| riboflavin-specific deaminase [Vibrio alginolyticus 40B]
gi|269830381|gb|EEZ84606.1| riboflavin-specific deaminase [Vibrio alginolyticus 40B]
Length = 375
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ AK I ++PNP VGCVIV+++ I+ GY G HAE+ A+ A G
Sbjct: 18 MSRAIKLAKRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEPHAEVHAMRMA---GEKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AGI V+
Sbjct: 75 VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQMLRDAGIEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N GF M+ G+P+V++K+A+SLD +++L N SQWITS +R D +
Sbjct: 135 IGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALNNGQSQWITSPAARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RAMSGGILS 203
>gi|378578439|ref|ZP_09827114.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Pantoea stewartii subsp. stewartii DC283]
gi|377818719|gb|EHU01800.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Pantoea stewartii subsp. stewartii DC283]
Length = 367
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIV++ I+ G+ + G HAE+ AL A A+
Sbjct: 7 MARALELARRGRFTTMPNPNVGCVIVRDGDIVGEGWHQRAGEPHAEVHALRMAGAR---A 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI++G+K+V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIEAGVKRVVAAMQDPNPQVAGRGLHRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM +EA +N GF RM+ G PW+++K+ +SLD +T++ + SQWITS +R D
Sbjct: 124 HGLMMQEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSPAARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 184 RAQSAAILS 192
>gi|146310543|ref|YP_001175617.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter sp. 638]
gi|145317419|gb|ABP59566.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Enterobacter sp.
638]
Length = 367
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGVIVGEGFHYRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L GI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCEALIDAGVARVVAAMQDPNPQVAGRGLYRLQQEGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM + +N GF RM+ G P++++K+ +SLD +T++ N SQW+TS +SR D
Sbjct: 124 HGLMMADTEALNKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWVTSPQSRRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|407688366|ref|YP_006803539.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291746|gb|AFT96058.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 379
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 122/186 (65%), Gaps = 4/186 (2%)
Query: 6 QQAKLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAA-AQGYDVYNST 63
QQ + + +SPNPRVGCVIV E +++ GY G HAE+ AL +A+ A+ +T
Sbjct: 21 QQGRFT--TSPNPRVGCVIVDENNQLLGQGYHIQAGTPHAEVHALRHASNARPQGAKGAT 78
Query: 64 VYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLM 123
Y+TLEPCS+FG TPPC AL+++ + +V+IA+ DPNP V G G++ L AGI V +M
Sbjct: 79 AYVTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGNGISILQDAGIEVVSDVM 138
Query: 124 QKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARS 183
EA +N GF RM G P+VR+K+ +SLD K +L N SQWIT E+R D +RA+S
Sbjct: 139 AAEAAALNPGFIKRMLTGKPFVRVKLGTSLDGKIALQNGVSQWITGAEARRDVQQYRAQS 198
Query: 184 CAILTG 189
C +LTG
Sbjct: 199 CVVLTG 204
>gi|260596783|ref|YP_003209354.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter turicensis z3032]
gi|260215960|emb|CBA28583.1| Riboflavin biosynthesis protein ribD [Cronobacter turicensis z3032]
Length = 367
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNPRVGCVIV + I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPRVGCVIVNDGVIVGEGFHLRAGEPHAEVHALRMA---GDKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AG+ V GLM EA +N
Sbjct: 76 SHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGVEVSHGLMMSEAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D RA S AILT
Sbjct: 136 KGFLKRMRTGFPFIQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAESHAILT 192
>gi|73748880|ref|YP_308119.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. CBDB1]
gi|147669641|ref|YP_001214459.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dehalococcoides sp. BAV1]
gi|452203863|ref|YP_007483996.1| Riboflavin biosynthesis protein RibD [Dehalococcoides mccartyi
DCMB5]
gi|452205360|ref|YP_007485489.1| Riboflavin biosynthesis protein RibD [Dehalococcoides mccartyi
BTF08]
gi|73660596|emb|CAI83203.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. CBDB1]
gi|146270589|gb|ABQ17581.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dehalococcoides sp. BAV1]
gi|452110922|gb|AGG06654.1| Riboflavin biosynthesis protein RibD [Dehalococcoides mccartyi
DCMB5]
gi|452112416|gb|AGG08147.1| Riboflavin biosynthesis protein RibD [Dehalococcoides mccartyi
BTF08]
Length = 365
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINS-SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL AKL+I SPNP VG VIVK ++ G+T+ PGG+HAEI AL AA +
Sbjct: 4 MSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEK---A 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPC + G TPPCT ++I SGIK+V IA D NPLVSGKG +L AGI V
Sbjct: 61 KGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSGKGKKELEDAGIKVH 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M++EA ++N +F + G+P+V K A SLD KT S+WI+++ESR+ +H
Sbjct: 121 LGMMEREARQMNEAYFKHVTTGMPFVTAKYAMSLDGKTGTRTGDSKWISNEESRHFAHYI 180
Query: 180 RARSCAILTGKN 191
R S I+ G N
Sbjct: 181 RHISDVIMAGLN 192
>gi|332982092|ref|YP_004463533.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mahella
australiensis 50-1 BON]
gi|332699770|gb|AEE96711.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Mahella australiensis 50-1 BON]
Length = 363
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A++ ++ PNP VG VIVK RII GY K G HAEI+AL A G
Sbjct: 7 MQRALELARMGWGTTNPNPMVGAVIVKGGRIIGEGYHKKAGEPHAEINALREA---GEGA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
STVY+TLEPCS+FG TPPC +AL+K+G+K+V+IA+ DPNP V+G+G+ L AGI V
Sbjct: 64 RGSTVYVTLEPCSHFGRTPPCADALVKAGVKEVVIAMEDPNPRVAGRGINALRQAGIKVI 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M++EA +N F + +P+V K A +LD K + N S+WIT++ SR H W
Sbjct: 124 TGIMEQEARRLNEVFIKYITSDMPFVIWKCAMTLDGKIATANGDSKWITNELSRQYVHWW 183
Query: 180 RARSCAILTG 189
R R A+LTG
Sbjct: 184 RYRVSAVLTG 193
>gi|410664516|ref|YP_006916887.1| riboflavin biosynthesis protein RibD [Simiduia agarivorans SA1 =
DSM 21679]
gi|409026873|gb|AFU99157.1| riboflavin biosynthesis protein RibD [Simiduia agarivorans SA1 =
DSM 21679]
Length = 364
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 126/191 (65%), Gaps = 5/191 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M ALQ A+ I S+ PNPRVGCV+V E I++ G+ + G HAE++AL AA G
Sbjct: 1 MARALQLAEQGIYSTRPNPRVGCVLVNEAGAIVAEGWHQRAGQGHAEVNAL---AALGGS 57
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
Y+TLEPC++ G T PC++ALI +GI++V+ + DPNP V+G G+A+L AG+ V
Sbjct: 58 AKGLIAYVTLEPCNHTGRTGPCSQALIDAGIRRVVFGMQDPNPRVAGSGLARLRDAGVEV 117
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ +++ +N GF RM++G+PWVR+K+ SLD +T++ + SQWIT +R D
Sbjct: 118 QGPVLEAGCRALNPGFIKRMEQGLPWVRVKLGMSLDGRTAMASGESQWITGPAARADVQK 177
Query: 179 WRARSCAILTG 189
RARSCAI+TG
Sbjct: 178 LRARSCAIVTG 188
>gi|212709165|ref|ZP_03317293.1| hypothetical protein PROVALCAL_00198 [Providencia alcalifaciens DSM
30120]
gi|212688077|gb|EEB47605.1| hypothetical protein PROVALCAL_00198 [Providencia alcalifaciens DSM
30120]
Length = 371
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + AK +SPNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MARAFELAKEGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +GI +V+ A+ DPNP V+G+G+ L AGI
Sbjct: 66 KGATAYVTLEPCSHHGRTPPCAEALINAGISRVVAAMQDPNPQVAGRGLYMLNQAGIETA 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
++ +EA +N GF RM+ P++++K+A+SLD KT+L N S+WITS +R D +
Sbjct: 126 SNILLEEAEALNRGFLKRMRTAFPYIQLKLAASLDGKTALANGESKWITSPAARKDVQVL 185
Query: 180 RARSCAILTGKN 191
RA++ AIL+ N
Sbjct: 186 RAQASAILSTSN 197
>gi|407700680|ref|YP_006825467.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Black Sea 11']
gi|407249827|gb|AFT79012.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Black Sea 11']
Length = 379
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 122/186 (65%), Gaps = 4/186 (2%)
Query: 6 QQAKLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAA-AQGYDVYNST 63
QQ + + +SPNPRVGCVIV E +++ GY G HAE+ AL A+ A+ + +T
Sbjct: 21 QQGRFT--TSPNPRVGCVIVDENNQLLGQGYHIQAGTPHAEVHALRQASNARPHGAKGAT 78
Query: 64 VYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLM 123
Y+TLEPCS+FG TPPC +AL+++ + +V+IA+ DPNP V G G++ L AGI V +M
Sbjct: 79 AYVTLEPCSHFGRTPPCAKALVEAEVARVVIAMTDPNPNVCGNGISLLQDAGIEVVSDVM 138
Query: 124 QKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARS 183
E+ +N GF RM G P+VR+K+ SLD K +L N SQWIT E+R D +RA+S
Sbjct: 139 AAESAALNPGFIKRMLTGKPFVRVKLGISLDGKIALQNGVSQWITGAEARRDVQQYRAQS 198
Query: 184 CAILTG 189
C +LTG
Sbjct: 199 CVVLTG 204
>gi|416892866|ref|ZP_11924190.1| RibD protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347814564|gb|EGY31213.1| RibD protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 374
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +II G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC + L+ +G++ VI A+ DPNPLV+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCAHYGRTPPCAKGLVDAGVRNVIAAMCDPNPLVAGKGLGILADAGIESA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++ A E+N GF RM+ G P+V++K+A S+D KT++ N S+WIT ++R D +
Sbjct: 130 VGLLKENAEELNKGFLKRMRTGRPFVQLKLAMSIDGKTAMANGESKWITGAQARADVQQY 189
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 190 RAKASAILS 198
>gi|325924396|ref|ZP_08185931.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
gardneri ATCC 19865]
gi|325545120|gb|EGD16439.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
gardneri ATCC 19865]
Length = 364
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ A G
Sbjct: 11 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGAHAEV---FALRAAGALA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+++V+ A+ DP P V+G G A L AGI V
Sbjct: 68 RGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIEVL 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+MQ +A +N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT ++R D W
Sbjct: 128 SGVMQAQARVLNQGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITGADARADVQRW 187
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 188 RARAGAILTG 197
>gi|167572878|ref|ZP_02365752.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis
C6786]
Length = 357
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVI ++++ G+ + G HAE+ AL A G
Sbjct: 1 MAHALRLAEQGLYTTRPNPRVGCVIAHGEQVLGTGWHRRAGEPHAEVHALREA---GERA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC AL+ +G+ +V+IA DP V+G+G A+L AGI V+
Sbjct: 58 RGATAYVTLEPCAHYGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAARLADAGIVVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QGLM+ EA E+NIGFFSR++RG PW R K+ S+D + + T ESR+D W
Sbjct: 118 QGLMEAEARELNIGFFSRIERGRPWTRAKLILSIDGPLDGIDRTVLDATESESRDDVRHW 177
Query: 180 RARSCAILTGKNI 192
RARS +L +
Sbjct: 178 RARSSVVLAPHGV 190
>gi|333368843|ref|ZP_08460998.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. 1501(2011)]
gi|332976011|gb|EGK12882.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. 1501(2011)]
Length = 374
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ AK + + PNP VGCV+VK+ II G+ G HAE+ AL NA V
Sbjct: 40 MNLAIEAAKKGLYTTRPNPAVGCVLVKDGLIIGTGFHPKAGQPHAEVFALRNAT---QSV 96
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALIK+ + +V+IA DPNP V+G+GV L+ AGI V
Sbjct: 97 AAATAYVTLEPCSHTGKTPPCAEALIKAQVSRVVIAGLDPNPKVAGRGVRLLLDAGIKVS 156
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A ++N+GF M+ +P+VR+KIASSLD +T++ + S+WIT +R D
Sbjct: 157 VGVCTEQAEQLNLGFLKSMRTQMPYVRLKIASSLDGRTAMASGESKWITGSAAREDVQQL 216
Query: 180 RARSCAILTG 189
RA S AI+TG
Sbjct: 217 RALSGAIITG 226
>gi|93007294|ref|YP_581731.1| riboflavin biosynthesis protein RibD [Psychrobacter cryohalolentis
K5]
gi|92394972|gb|ABE76247.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Psychrobacter
cryohalolentis K5]
Length = 370
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++QAKL + + PNP VGCVIV+ + ++ G+ G HAE+ AL +A G
Sbjct: 35 MMLAIEQAKLGLYTARPNPAVGCVIVQAEEVVGQGFHPKAGQPHAEVFALKDA---GIRT 91
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI+SG+ +V++A DPNP V+G+GV L AGI+V
Sbjct: 92 VGATAYVTLEPCSHTGRTPPCAKALIESGVIRVVVAGLDPNPQVAGRGVKLLEQAGIAVS 151
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ +A +N GF M+ +P+VR+KIA+SLD +T++ S+WIT +R D
Sbjct: 152 VGVLKTQAEALNKGFLKAMRNQMPYVRLKIATSLDGRTAMATGESKWITGPAAREDVQKL 211
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 212 RAQSGAIITG 221
>gi|392393798|ref|YP_006430400.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390524876|gb|AFM00607.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 365
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A L++ +SPNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 8 MSRALELAALAMGRTSPNPLVGCVIVKDGAIVGEGYHQKAGTPHAEVHAL---KAAGKHA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +ALIK+GI++V++++ DPNPLV G+GVA+L AGI V
Sbjct: 65 QGATAYVTLEPCSHFGKTPPCADALIKAGIERVVVSMVDPNPLVGGQGVARLREAGIQVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL +KEA +N GF +Q G+P++ K A +LD K + + S+WIT++ SR H
Sbjct: 125 VGLKEKEAKSLNKGFLKEIQTGLPFLLYKSALTLDGKIATESGDSKWITNEASRAYVHQL 184
Query: 180 RARSCAILTG 189
R R I+ G
Sbjct: 185 RNRFDVIMVG 194
>gi|401678844|ref|ZP_10810798.1| riboflavin biosynthesis protein RibD [Enterobacter sp. SST3]
gi|400213940|gb|EJO44872.1| riboflavin biosynthesis protein RibD [Enterobacter sp. SST3]
Length = 367
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ G+ G HAE+ AL A G +T Y+TLEPC
Sbjct: 19 FTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKARGATAYVTLEPC 75
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ ++ DPNP V+G+G+ +L GI V GLM ++A +N
Sbjct: 76 SHHGRTPPCCDALIAAGVSRVVASMQDPNPQVAGRGLYRLQQEGIDVSHGLMMQDAEALN 135
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF RM+ G P++++K+ +SLD +T++ N SQWITS ++R D RA+S AILT
Sbjct: 136 KGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQRLRAQSHAILT 192
>gi|218710376|ref|YP_002417997.1| riboflavin biosynthesis protein RibD [Vibrio splendidus LGP32]
gi|218323395|emb|CAV19572.1| Riboflavin biosynthesis protein ribD [Vibrio splendidus LGP32]
Length = 374
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 129/190 (67%), Gaps = 5/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVK-EKRIISCGYTKSPGGNHAEIDALLNAAAQGYD 58
M+ A++ AK I ++PNP VGCVIV+ + +I+ G+ G HAE+ A+ A G
Sbjct: 12 MSRAIKLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEAHAEVHAMRMA---GDK 68
Query: 59 VYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
+ Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L A I V
Sbjct: 69 AKGAIAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDACIEV 128
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ GL++++A ++N F RMQ G+P+V++K+A+SLD +T+L N SQWITS E+R D
Sbjct: 129 EIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSPEARRDVQN 188
Query: 179 WRARSCAILT 188
+RA+S A+L+
Sbjct: 189 YRAKSGAVLS 198
>gi|262274779|ref|ZP_06052590.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Grimontia hollisae CIP 101886]
gi|262221342|gb|EEY72656.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Grimontia hollisae CIP 101886]
Length = 373
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK I ++PNP VGCVI + I+ G+ G HAE+ AL A G
Sbjct: 10 MLRAIELAKRGIYTTAPNPNVGCVITQGDDIVGEGFHFRAGEPHAEVYAL---RAAGEKA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ ++ AGI V
Sbjct: 67 CGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVCAMVDPNPKVAGRGIQRMRDAGIQVD 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLMQ +A +N GF M+ G+P+V++K+ASS+D +T+L N SQWIT E+R D ++
Sbjct: 127 VGLMQAQAEALNPGFIKVMKTGLPFVQLKLASSIDGRTALANGQSQWITGAEARADVQVF 186
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 187 RAQAGAILS 195
>gi|423118930|ref|ZP_17106614.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5246]
gi|376399576|gb|EHT12190.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5246]
Length = 367
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ G+ G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L GI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQEGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMGEAEALNKGFLKRMRTGFPYIQLKMGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|402698230|ref|ZP_10846209.1| riboflavin biosynthesis protein RibD [Pseudomonas fragi A22]
Length = 363
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+ + + PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 1 MARAIELARNGLYTTHPNPRVGCVIVRDGQIVGEGWHVRTGEPHAEVHAL---RAAGELA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G+TPPC + L +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 58 RGATAYVTLEPCSHHGHTPPCADGLRHAGVARVVAAMQDPNPEVAGRGLKRLADAGIEVC 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ N SQWIT +R+
Sbjct: 118 SGVLESEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMANGESQWITGPAARSAVQRL 177
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 178 RAQASVVLTGAD 189
>gi|260775295|ref|ZP_05884192.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio coralliilyticus ATCC BAA-450]
gi|260608476|gb|EEX34641.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio coralliilyticus ATCC BAA-450]
Length = 368
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ AK I ++PNP VGCVI + I+ G+ G HAE+ AL A G
Sbjct: 12 MSRAIELAKGGIYTTAPNPNVGCVITLDDDIVGEGFHYRAGEPHAEVHALRMA---GDKS 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + KVI A+ DPNP V+G+G+ L AGI V+
Sbjct: 69 VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMEDPNPQVAGRGIKMLCDAGIEVQ 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N F RM+ G+P+V++K+A+S D +T+L N SQWITS ++R D +
Sbjct: 129 VGLLESDAMALNSAFIKRMKTGMPFVQLKMAASFDGQTALSNGQSQWITSPQARQDVQNY 188
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 189 RAQAGAILS 197
>gi|392407158|ref|YP_006443766.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Anaerobaculum mobile DSM 13181]
gi|390620294|gb|AFM21441.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Anaerobaculum mobile DSM 13181]
Length = 362
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVY 60
M L+L Q + + ++PNPRVGCV+VK+ I+ G+ + PGG HAE++AL A G
Sbjct: 15 MALSLAQ-RGTGTTTPNPRVGCVVVKDGTIVGMGFHRYPGGPHAEVEALSEA---GEMAE 70
Query: 61 NSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQ 120
+T+Y+ LEPC+++G TPPC +++SGIK+ IA DP P V GKG+ L S G+ V
Sbjct: 71 GATLYVNLEPCTHYGRTPPCCPLIVQSGIKRAFIATKDPFPKVQGKGIEYLSSRGLDVTV 130
Query: 121 GLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
G+++KEA +N GFF + G PW+ +K ASSLD +L + SS+W+T + S +H+ R
Sbjct: 131 GILEKEARWLNRGFFKAYEEGRPWITLKAASSLDGNVALEDGSSRWVTGQSSLKRAHLLR 190
Query: 181 ARSCAILTG 189
A + AIL G
Sbjct: 191 AETDAILVG 199
>gi|91225069|ref|ZP_01260291.1| riboflavin-specific deaminase [Vibrio alginolyticus 12G01]
gi|91190012|gb|EAS76283.1| riboflavin-specific deaminase [Vibrio alginolyticus 12G01]
Length = 375
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ AK I ++PNP VGCVIV+++ I+ GY G HAE+ A+ A G
Sbjct: 18 MSRAIKLAKRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEPHAEVHAMRMA---GEKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AGI V+
Sbjct: 75 VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQMLRDAGIEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N GF M+ G+P+V++K+A+SLD +++L N SQWITS +R D +
Sbjct: 135 IGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALSNGQSQWITSPAARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RAISGGILS 203
>gi|392956883|ref|ZP_10322409.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Bacillus macauensis ZFHKF-1]
gi|391877380|gb|EIT85974.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Bacillus macauensis ZFHKF-1]
Length = 360
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ A+ + ++PNP VG VIVK RI+ G PG HAEI AL A G +
Sbjct: 7 MKLAIENARAMKGQTAPNPMVGAVIVKNGRIVGIGSHLKPGEPHAEIHALRMA---GDEA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPCS+ G T PC EALIK+G+KKV+IA DPNPLV+G+GV L AGI V
Sbjct: 64 SESTIYVTLEPCSHVGKTGPCAEALIKAGVKKVVIASLDPNPLVAGRGVTMLREAGIEVV 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++E++E+N F + P+V +K A +LD KT+ + SQWIT +++R D H+
Sbjct: 124 TGVLEQESWEMNEVFNHFIVHNRPFVTLKAAMTLDGKTATHTMHSQWITGEKAREDVHVL 183
Query: 180 RARSCAILTG 189
R+ AIL G
Sbjct: 184 RSEHQAILVG 193
>gi|251792829|ref|YP_003007555.1| riboflavin biosynthesis protein RibD [Aggregatibacter aphrophilus
NJ8700]
gi|247534222|gb|ACS97468.1| riboflavin biosynthesis protein RibD [Aggregatibacter aphrophilus
NJ8700]
Length = 374
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +II G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC + L+ +G++ VI A+ DPNPLV+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCAHYGRTPPCAKGLVDAGVRIVIAAMCDPNPLVAGKGLGILADAGIESA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++ A E+N GF RM+ G P+V++K+A S+D KT++ N S+WIT ++R D +
Sbjct: 130 VGLLKENAEELNKGFLKRMRTGRPFVQLKLAMSIDGKTAMANGESKWITGAQARADVQQY 189
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 190 RAKASAILS 198
>gi|225851435|ref|YP_002731669.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1]
gi|225645583|gb|ACO03769.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1]
Length = 365
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+L + PNP VG VIVK+ +II G+ K G HAE +A+ +A +G+++
Sbjct: 10 MKEALRLAELRKGLTHPNPTVGAVIVKDGKIIGKGFHKKAGMPHAEREAINDAIKKGFNL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPC ++G TPPCTEA+I IK+V+IA DPNP VSGKGV L GI
Sbjct: 70 EGSTMYVTLEPCCHYGRTPPCTEAIIDRRIKRVVIATVDPNPQVSGKGVEILKKHGIETV 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++Q EA ++N FF ++ P++ +KIA SLD K + SS+WITS+ESR H
Sbjct: 130 VGVLQDEARKLNEDFFVYIKEKRPFIHLKIAQSLDGKIATGTGSSKWITSEESRRYVHKL 189
Query: 180 RARSCAILTGKN 191
R S AI+ G N
Sbjct: 190 RRESTAIMVGTN 201
>gi|219668833|ref|YP_002459268.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
DCB-2]
gi|219539093|gb|ACL20832.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
DCB-2]
Length = 365
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A L++ +SPNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 8 MSRALELAALAMGRTSPNPLVGCVIVKDGAIVGEGYHQKAGTPHAEVHAL---QAAGEHA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +ALIK+GI++V++A+ DPNPLV G+G+ +L +AGI V
Sbjct: 65 RGATAYVTLEPCSHFGKTPPCADALIKAGIQRVVVAMVDPNPLVGGQGITRLRAAGIQVD 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL +KEA +N GF MQ G+P+V K A +LD K + + S+W+T++ SR H
Sbjct: 125 VGLKEKEARTLNKGFLKAMQTGLPFVLYKSALTLDGKIATESGDSKWVTNEASRAYVHRL 184
Query: 180 RARSCAILTG 189
R I+ G
Sbjct: 185 RDHFDVIMVG 194
>gi|395651520|ref|ZP_10439370.1| riboflavin biosynthesis protein RibD [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 378
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +I+ G+ G HAE+ AL A G
Sbjct: 16 MARALELARNGLYTTHPNPRVGCVIVRDGQIVGEGWHVRTGEPHAEVHAL---RAAGDKA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G+TPPC +AL+ +G+ +V+ A+ D NP V+G+G+ +L AGI V
Sbjct: 73 RGATAYVTLEPCSHYGHTPPCADALVSAGVARVVAAMQDSNPDVAGRGMQRLAQAGIDVY 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R
Sbjct: 133 SGVLEGEARALNKGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQRL 192
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 193 RAEASVVLTGAD 204
>gi|213018626|ref|ZP_03334434.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|212995577|gb|EEB56217.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 399
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINS-SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M++AL+ A+ S+ S +PNP VGC+IVK +I GYT G HAE+ AL NA
Sbjct: 1 MSIALKLAEKSLGSVAPNPAVGCIIVKNGMVIGEGYTGIGGRPHAEVVALQNAKDL---T 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+++T+Y+TLEPC +FG T PCT +IKSGIK+V+IA DP+ VSG G+ L AGI V+
Sbjct: 58 HSATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSGGGIKALKEAGIEVE 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QG+MQKEA +N+GFF+ + P++ KIA++LD K + + S+WITS+++RN H
Sbjct: 118 QGIMQKEAEVLNVGFFTTKEFHRPFIACKIATTLDGKIATFTGDSKWITSEDTRNWVHEL 177
Query: 180 RARSCAILTG 189
RA+ AI+ G
Sbjct: 178 RAKYDAIMIG 187
>gi|190571227|ref|YP_001975585.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|190357499|emb|CAQ54935.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
Length = 405
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINS-SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M++AL+ A+ S+ S +PNP VGC+IVK +I GYT G HAE+ AL NA
Sbjct: 7 MSIALKLAEKSLGSVAPNPAVGCIIVKNGMVIGEGYTGIGGRPHAEVVALQNAKDL---T 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+++T+Y+TLEPC +FG T PCT +IKSGIK+V+IA DP+ VSG G+ L AGI V+
Sbjct: 64 HSATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSGGGIKALKEAGIEVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QG+MQKEA +N+GFF+ + P++ KIA++LD K + + S+WITS+++RN H
Sbjct: 124 QGIMQKEAEVLNVGFFTTKEFHRPFIACKIATTLDGKIATFTGDSKWITSEDTRNWVHEL 183
Query: 180 RARSCAILTG 189
RA+ AI+ G
Sbjct: 184 RAKYDAIMIG 193
>gi|295398347|ref|ZP_06808389.1| riboflavin biosynthesis protein RibD [Aerococcus viridans ATCC
11563]
gi|294973486|gb|EFG49271.1| riboflavin biosynthesis protein RibD [Aerococcus viridans ATCC
11563]
Length = 364
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 124/190 (65%), Gaps = 1/190 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+L + NP VG VIVK +II GY + GG HAE +AL +A QG+DV
Sbjct: 5 MQEALDLAELGQGWTRSNPMVGAVIVKNSQIIGRGYHQQYGGLHAEREALKDANEQGHDV 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPC +FG TPPCT+A+I+ GI+KV++A DPNPLV+GKG+ +L + I V+
Sbjct: 65 KGATMYVTLEPCCHFGKTPPCTQAIIEGGIEKVVVAAIDPNPLVAGKGIQELRNHHIEVE 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ +E+ ++N F M P+V MK A +LD +T+ Y SQWIT K +R H
Sbjct: 125 TGLLAEESEDLNRKFNYFMTHQRPYVTMKYAMTLDGRTAAYTGDSQWITDKIAREHVHYQ 184
Query: 180 RARSCAILTG 189
R R+ +I+ G
Sbjct: 185 RHRNQSIMVG 194
>gi|270308361|ref|YP_003330419.1| riboflavin biosynthesis protein,
5-amino-6-(5-phosphoribosylamino)uracil reductase,
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dehalococcoides sp. VS]
gi|270154253|gb|ACZ62091.1| riboflavin biosynthesis protein,
5-amino-6-(5-phosphoribosylamino)uracil reductase,
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dehalococcoides sp. VS]
Length = 365
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINS-SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL AKL+I SPNP VG VIVK ++ G+T+ PGG+HAEI AL AA +
Sbjct: 4 MSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEK---A 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPC + G TPPCT ++I+SGIK+V IA D NPLVSGKG +L +AGI V
Sbjct: 61 KGAALYVTLEPCCHQGRTPPCTGSIIESGIKEVYIATLDDNPLVSGKGKKELENAGIKVH 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M++EA ++N +F + G+P+V K A SLD KT S+WI+++ESR+ +H
Sbjct: 121 LGMMEREARQMNEAYFKHITTGMPFVTAKYAMSLDGKTGTRTGDSKWISNEESRHFAHYI 180
Query: 180 RARSCAILTGKN 191
R S I+ G N
Sbjct: 181 RHISDVIMAGLN 192
>gi|57234067|ref|YP_181903.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes
195]
gi|57224515|gb|AAW39572.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes
195]
Length = 365
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINS-SPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL AKL+I SPNP VG VIVK ++ G+T+ PGG+HAEI AL AA +
Sbjct: 4 MSQALSLAKLAIGQVSPNPAVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEK---A 60
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPC + G TPPCT A+I+SGIK+V IA D NPLVSGKG +L AGI V
Sbjct: 61 KGAALYVTLEPCCHQGRTPPCTVAIIESGIKEVYIATLDDNPLVSGKGKKELEDAGIKVH 120
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M++EA ++N +F + G+P+V K A SLD KT S+WI+++ESR+ +H
Sbjct: 121 LGMMEREARQMNEAYFKYITTGMPFVTAKYAMSLDGKTGTRTGDSKWISNEESRHFAHYI 180
Query: 180 RARSCAILTGKN 191
R S I+ G N
Sbjct: 181 RHISDVIMAGLN 192
>gi|326390344|ref|ZP_08211903.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
ethanolicus JW 200]
gi|325993621|gb|EGD52054.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
ethanolicus JW 200]
Length = 360
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNP VG VIVK +II GY + GG HAE++AL NA DV ST+++TLEPCS+
Sbjct: 19 TNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVE---DVKGSTMFVTLEPCSH 75
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
+G TPPC E +IKSGIK+V IA+ DPNP VSG + +L AGI V+ G+M+KEA ++N
Sbjct: 76 YGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNSIKRLKEAGIEVQVGMMEKEARKLNEI 135
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
F + IP+V +K A S+D K + YN +S+WIT+++SR +H R R AI+ G N
Sbjct: 136 FVKYITTKIPFVILKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRGRVSAIMVGVN 193
>gi|87121732|ref|ZP_01077619.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Marinomonas sp. MED121]
gi|86162983|gb|EAQ64261.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Marinomonas sp. MED121]
Length = 383
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A+ + + PNPRVGCV+V++ +++ GY K G HAE++A+ NA D
Sbjct: 13 MAQAIQLARKGLYTTHPNPRVGCVLVRDNSLVAEGYHKVAGEGHAEVNAIANANG---DT 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
T Y+TLEPCS+ G T PC +ALIK+ + +++ + DPNP V+G+G+A L AGI V
Sbjct: 70 QGCTAYVTLEPCSHQGKTGPCAKALIKANVSRLVYGMQDPNPDVAGRGLAMLKEAGIEVI 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+M+ EA +N GF RM G+P+VR+K+A SLD +T++ + SQWIT ++R D
Sbjct: 130 GPVMETEALALNPGFIKRMTEGLPYVRLKLAMSLDGRTAMESGESQWITGPDARLDVQKL 189
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 190 RAQSDAIVTG 199
>gi|89894408|ref|YP_517895.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Desulfitobacterium hafniense Y51]
gi|423073999|ref|ZP_17062734.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
DP7]
gi|89333856|dbj|BAE83451.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Desulfitobacterium hafniense Y51]
gi|361855148|gb|EHL07145.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
DP7]
Length = 372
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A L++ +SPNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 15 MSRALELAALAMGRTSPNPLVGCVIVKDGVIVGEGYHQKAGTPHAEVHAL---QAAGEHA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +ALIK+GI++V++A+ DPNPLVSG+G+ +L +AGI V
Sbjct: 72 RGATAYVTLEPCSHFGKTPPCADALIKAGIQRVVVAMVDPNPLVSGQGITRLRAAGIQVD 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL +KEA +N GF MQ G+P+V K A +LD K + + S+W++++ SR H
Sbjct: 132 VGLKEKEARTLNKGFLKAMQTGLPFVLYKSALTLDGKIATESGDSKWVSNEASRAYVHRL 191
Query: 180 RARSCAILTG 189
R I+ G
Sbjct: 192 RDHFDVIMVG 201
>gi|104779848|ref|YP_606346.1| riboflavin biosynthesis protein RibD [Pseudomonas entomophila L48]
gi|95108835|emb|CAK13531.1| Riboflavin biosynthesis protein RibD [Pseudomonas entomophila L48]
Length = 375
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ A+ + + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 12 MARAVELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GELA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+K+G+ +V+ A+ DPNP V+G G+ +L AGI V
Sbjct: 69 RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGNGLRRLREAGIEVA 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R
Sbjct: 129 SGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAAVQRL 188
Query: 180 RARSCAILT 188
RARS +LT
Sbjct: 189 RARSSVVLT 197
>gi|398901769|ref|ZP_10650560.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM50]
gi|398179380|gb|EJM66992.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM50]
Length = 377
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCV+V + +I+ G+ G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVVVLDGQIVGEGWHVRTGEPHAEVHAL---RAAGDKA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+ +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 192 RAEASVVLTGAD 203
>gi|352106423|ref|ZP_08961409.1| riboflavin biosynthesis protein RibD [Halomonas sp. HAL1]
gi|350597763|gb|EHA13890.1| riboflavin biosynthesis protein RibD [Halomonas sp. HAL1]
Length = 388
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++++I+ G+ + G HAEI AL NAA G
Sbjct: 13 MAQALKLARKGLYTTDPNPRVGCVIVRDEQIVGEGFHRRAGEPHAEIHAL-NAA--GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC AL K+ + +V+IA+ DPNP VSG+G+ L AGI V
Sbjct: 70 QGATAYVTLEPCSHTGRTGPCAVALQKAKVARVVIAMQDPNPQVSGRGIRLLEEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
L++ EA +N GF +RM P+VR+K+A SLD +T++ + SQWIT E+R
Sbjct: 130 VSLLESEARALNPGFIARMTTQRPFVRLKMAMSLDGRTAMGSGESQWITGPEARTQVQRL 189
Query: 180 RARSCAILTG 189
RARS AIL+G
Sbjct: 190 RARSSAILSG 199
>gi|422019672|ref|ZP_16366215.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia alcalifaciens Dmel2]
gi|414102778|gb|EKT64368.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia alcalifaciens Dmel2]
Length = 371
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + AK +SPNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MARAFELAKEGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVYALRMA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +GI +V+ A+ DPNP V+G+G+ L AGI
Sbjct: 66 KGATAYVTLEPCSHHGRTPPCAEALINAGISRVVAAMQDPNPQVAGRGLYMLNQAGIETA 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
++ +EA +N GF RM+ P++++K+A+SLD KT+L N S+WITS +R D +
Sbjct: 126 SNILLEEAEALNRGFLKRMRTAFPYIQLKLAASLDGKTALANGESKWITSPAARKDVQVL 185
Query: 180 RARSCAILTGKN 191
RA++ AIL+ N
Sbjct: 186 RAQASAILSTSN 197
>gi|262373927|ref|ZP_06067204.1| riboflavin biosynthesis protein RibD [Acinetobacter junii SH205]
gi|262310938|gb|EEY92025.1| riboflavin biosynthesis protein RibD [Acinetobacter junii SH205]
Length = 366
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 123/177 (69%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++ PNP VGCVIVK+ +II G+ G HAE+ AL A G + ++T Y+TLEPC+
Sbjct: 29 STKPNPNVGCVIVKDGKIIGEGFHPKAGQPHAEVFALRQA---GENAKDATAYVTLEPCA 85
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+FG TPPC EAL+K+ +KKV++A +DPNPLV+GKGV L AGI V+ G+ +EA +N
Sbjct: 86 HFGRTPPCAEALVKAQVKKVVVACSDPNPLVAGKGVKILQDAGIEVETGICDEEAKTLNF 145
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF M G+P+VR+KIASSLD +T++ + S+WIT +R D WRA S A++TG
Sbjct: 146 GFLKAMSTGLPYVRLKIASSLDGRTAMASGESKWITGTAARQDVQHWRAISAAVITG 202
>gi|398925606|ref|ZP_10661980.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM48]
gi|398171967|gb|EJM59855.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM48]
Length = 377
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A K + PNPRVGCVIV+ +I+ G+ + G HAE+ AL A G
Sbjct: 15 MARALELARKGHYTTHPNPRVGCVIVQGGQIVGEGWHERAGEPHAEVHAL---HAAGEQA 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI +
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLEQAGIVTE 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N GF RM+ G+P++R+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVLEGEARKLNQGFLKRMEHGLPFLRVKLAMSLDGRTAMESGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|195952880|ref|YP_002121170.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1]
gi|195932492|gb|ACG57192.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1]
Length = 357
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL++A K + PNP VG +IVK+ +I+S G K G +HAEI AL NA DV
Sbjct: 9 MKLALEEAYKYKGQTHPNPAVGVLIVKDDKILSIGAHKKAGTDHAEIVALKNAQE---DV 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPCS+ G TPPC A+I SGIKKV+I DPNP VSGKG+ L SAGI V+
Sbjct: 66 KGATMYVTLEPCSFHGKTPPCCPAIISSGIKKVVIGSVDPNPKVSGKGIEWLKSAGIEVE 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++E ++N FF + + P++ +K A SLD K + N S+WI+S+++R SHI+
Sbjct: 126 VGVLKEECDKLNEDFFVYITQKRPFITLKCAMSLDGKLAKENKDSKWISSEKARKISHIY 185
Query: 180 RARSCAILTGKN 191
R S AIL G N
Sbjct: 186 RKYSSAILVGIN 197
>gi|404477155|ref|YP_006708586.1| riboflavin biosynthesis protein RibD [Brachyspira pilosicoli B2904]
gi|404438644|gb|AFR71838.1| riboflavin biosynthesis protein RibD [Brachyspira pilosicoli B2904]
Length = 365
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 127/192 (66%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +A+++AK +SPNP VG VIVK+ R+I GY K G NHAEI+A LNA G DV
Sbjct: 6 MRMAIEEAKKGEGFTSPNPLVGAVIVKDDRVIGIGYHKKYGENHAEINAFLNAKENGEDV 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+++Y+TLEPCS++G TPPC +A+IK+ +KKVII D NP V+G G+ +L AGI V
Sbjct: 66 EGASIYVTLEPCSHYGKTPPCADAIIKNKLKKVIIGCVDSNPKVAGNGIKKLKDAGIEVI 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
++++E ++N FF + P+V MK A ++D K + + S+WITS+++R SH +
Sbjct: 126 VNVLEEECRKLNEVFFYYIANKRPFVVMKYAMTMDGKIATVSGKSKWITSEKTREHSHRF 185
Query: 180 RARSCAILTGKN 191
R + AI+ G N
Sbjct: 186 RNKYSAIMVGIN 197
>gi|262395034|ref|YP_003286888.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. Ex25]
gi|262338628|gb|ACY52423.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. Ex25]
Length = 375
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ A+ I ++PNP VGCVIV+++ I+ GY G HAE+ A+ A G
Sbjct: 18 MSRAIKLARRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEPHAEVHAMRMA---GEKA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC E LIK+ + +V+ A+ DPNP V+G+G+ L AGI V+
Sbjct: 75 VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQMLRDAGIEVQ 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N GF M+ G+P+V++K+A+SLD +++L N SQWITS +R D +
Sbjct: 135 IGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALSNGQSQWITSPVARQDVQRY 194
Query: 180 RARSCAILT 188
RA S IL+
Sbjct: 195 RAMSGGILS 203
>gi|70728414|ref|YP_258163.1| riboflavin biosynthesis protein RibD [Pseudomonas protegens Pf-5]
gi|68342713|gb|AAY90319.1| riboflavin biosynthesis protein RibD [Pseudomonas protegens Pf-5]
Length = 368
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ +S+ PNPRVGCVI +++ G+ + GG HAE+ AL A G
Sbjct: 12 MQHALSLAERGSHSTWPNPRVGCVIAHGSQVVGEGWHRRAGGPHAEVFALRQA---GGLA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+T+EPCS+ G T C +ALI SG+ V++A DP V+G+G+AQL +AGI V+
Sbjct: 69 RGATAYVTMEPCSHVGRTGACHQALIDSGVHSVVVAHQDPFEQVNGQGIAQLRNAGIEVR 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ A E+N GF S ++R PWV++K+ SLD +T+L N S+WITS +R D W
Sbjct: 129 VGLLESAAQELNRGFLSTVRRQRPWVQLKMGMSLDGRTALDNGRSKWITSTRARADVQYW 188
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 189 RARSSAILTG 198
>gi|90406961|ref|ZP_01215152.1| Putative pyrimidine deaminase/pyrimidine reductase [Psychromonas
sp. CNPT3]
gi|90312003|gb|EAS40097.1| Putative pyrimidine deaminase/pyrimidine reductase [Psychromonas
sp. CNPT3]
Length = 381
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ AK S+PNP VGCVIV + ++ G+ G HAE+ AL A G
Sbjct: 14 MSRALELAKKGRFTSAPNPNVGCVIVLDDIVVGTGFHFKAGQGHAEVYAL---AMAGSKA 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ST Y+TLEPCS+FG TPPC ALIK+G+K+V +A+ DPNP V+G+G+ L AGI V
Sbjct: 71 QSSTCYVTLEPCSHFGRTPPCALALIKAGVKRVCVAMRDPNPQVAGQGIKLLQDAGIEVS 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A ++N+GF +RM V +K+ +SLD KT+L N SQWIT +SR D +
Sbjct: 131 VGLLEPQAKQLNLGFINRMLHKRARVTLKLGASLDGKTALKNGKSQWITGSQSRCDVQHF 190
Query: 180 RARSCAILT 188
RA+ AIL+
Sbjct: 191 RAQQSAILS 199
>gi|58699421|ref|ZP_00374173.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630417|ref|YP_002727208.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi]
gi|58534061|gb|EAL58308.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592398|gb|ACN95417.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi]
Length = 360
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M++AL+ A+ ++ N +PNP VGCVIVK+ I+S GYT G HAE+ AL NA
Sbjct: 7 MSIALRLAEKNLGNVAPNPAVGCVIVKDGTIVSEGYTGIGGRPHAEVVALQNAKDS---T 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T+YITLEPC + G T PCT +IK+ IK+V+IA DP+ VSG+G+ L AGI V+
Sbjct: 64 HGATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGRGMKALKEAGIEVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QG+MQKEA E+N+GFF+ + P++ K+A++LD K + + S+WITS+ +RN H
Sbjct: 124 QGIMQKEAKELNVGFFTTKELHRPFIACKVATTLDGKIATFTGDSKWITSENTRNWVHEL 183
Query: 180 RARSCAILTGKN 191
R + AI+ G N
Sbjct: 184 RTKYDAIMIGSN 195
>gi|434381009|ref|YP_006702792.1| riboflavin biosynthesis protein RibD [Brachyspira pilosicoli WesB]
gi|404429658|emb|CCG55704.1| riboflavin biosynthesis protein RibD [Brachyspira pilosicoli WesB]
Length = 365
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 127/192 (66%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +A+++AK +SPNP VG VIVKE ++I GY K G NHAEI+A LNA G DV
Sbjct: 6 MRMAIEEAKKGEGFTSPNPLVGAVIVKENKVIGIGYHKKYGENHAEINAFLNAKENGEDV 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+++Y+TLEPCS++G TPPC +A+IK+ +KKVII D NP V+G G+ +L AGI V
Sbjct: 66 EGASIYVTLEPCSHYGKTPPCADAIIKNKLKKVIIGCVDSNPKVAGNGIKKLKDAGIEVI 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
++++E ++N FF + P+V MK A ++D K + + S+WITS+++R SH +
Sbjct: 126 VNVLEEECRKLNEVFFYYIANKRPFVVMKYAMTMDGKIATVSGKSKWITSEKTREHSHRF 185
Query: 180 RARSCAILTGKN 191
R + AI+ G N
Sbjct: 186 RNKYSAIMVGIN 197
>gi|152979034|ref|YP_001344663.1| riboflavin biosynthesis protein RibD [Actinobacillus succinogenes
130Z]
gi|150840757|gb|ABR74728.1| riboflavin biosynthesis protein RibD [Actinobacillus succinogenes
130Z]
Length = 375
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL A+ ++PNP VGCV+VK +I+ G+ G HAE+ A+ +A G +
Sbjct: 12 MQLALDLARRGRFTTTPNPNVGCVLVKHNKIVGTGFHFRAGEPHAEVMAIRDA---GDNT 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC + LI +G+ KVIIA DPNP V+G+G+ L AGI
Sbjct: 69 QGATAYVTLEPCSHYGRTPPCAQGLINAGVTKVIIATQDPNPQVAGRGLKMLQDAGIESA 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ ++A +N+GF RM+ G+P+V++K+A SLD +T++ + S+WIT + +R D
Sbjct: 129 VGLLAEKAEAVNLGFLKRMRTGMPFVQLKLAMSLDGRTAMASGESKWITGEAARADVQEG 188
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 189 RAQASAILS 197
>gi|71066695|ref|YP_265422.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Psychrobacter arcticus 273-4]
gi|71039680|gb|AAZ19988.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Psychrobacter arcticus 273-4]
Length = 351
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++QAKL + S+ PNP VGCVIV+ + ++ G+ G HAE+ AL +A G
Sbjct: 16 MMLAIEQAKLGLYSTRPNPAVGCVIVQAEEVVGQGFHPKVGQPHAEVFALKDA---GIRA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI+SG+ +V++A DPNP V+G+GV L AGI V
Sbjct: 73 VGATAYVTLEPCSHTGRTPPCAKALIESGVIRVVVAGLDPNPQVAGRGVRLLEQAGIEVT 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ +A +N GF M+ +P+VR+KIA+SLD +T++ S+WIT +R D
Sbjct: 133 VGILTAQAEVLNKGFLKAMRTQMPYVRLKIATSLDGRTAMATGESKWITGPAAREDVQKL 192
Query: 180 RARSCAILTG 189
RA+S AI+TG
Sbjct: 193 RAQSGAIITG 202
>gi|89097868|ref|ZP_01170755.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911]
gi|89087370|gb|EAR66484.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911]
Length = 371
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 8/194 (4%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDA--LLNAAAQGY 57
M LAL A+ +I +SPNP VG V+VK+ +I G G HAE+ A + + A+G
Sbjct: 7 MDLALSLARKTIGQTSPNPCVGAVVVKDGQIAGMGAHLKAGTQHAEVHAIRMADGLARG- 65
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+ +Y+TLEPCS+ G TPPC + +I+SGIK+V+IA DPNP+V+G+G+A+L +AGI
Sbjct: 66 ----AEIYVTLEPCSHHGKTPPCADLIIESGIKRVVIASIDPNPIVAGRGIAKLEAAGIE 121
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ G+ ++EA EIN FF M+ P+V +K A+S D KT+ SQWITS ESR D H
Sbjct: 122 VEVGIRREEAEEINSAFFHFMRTSRPYVTIKAAASFDGKTAANTGDSQWITSPESREDVH 181
Query: 178 IWRARSCAILTGKN 191
R AILTG N
Sbjct: 182 RLRHEHDAILTGVN 195
>gi|325918412|ref|ZP_08180540.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
vesicatoria ATCC 35937]
gi|325535374|gb|EGD07242.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
vesicatoria ATCC 35937]
Length = 364
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNP VGCVIV++ + G+ + GG HAE+ A G
Sbjct: 11 MAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEV---FALRAAGALA 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALI++G+ +V+ A+ DP P V+G G A L AGI V
Sbjct: 68 RGATAYVTLEPCAHYGRTPPCALALIEAGVARVVAAMADPFPQVNGGGFALLREAGIEVV 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++Q +A ++N GF SR++RG PW+R+K+ +SLD +T+L + S+WIT ++R D W
Sbjct: 128 SGVLQAQARQLNQGFLSRVERGRPWLRVKLGASLDGRTALASGQSKWITGADARADVQRW 187
Query: 180 RARSCAILTG 189
RAR+ AILTG
Sbjct: 188 RARAGAILTG 197
>gi|126030525|pdb|2G6V|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli
gi|126030526|pdb|2G6V|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli
gi|134105114|pdb|2OBC|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli In
Complex With A Substrate Analogue, Ribose 5-Phosphate
(Beta Form), Bound To The Active Site Of The Reductase
Domain
gi|134105115|pdb|2OBC|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli In
Complex With A Substrate Analogue, Ribose 5-Phosphate
(Beta Form), Bound To The Active Site Of The Reductase
Domain
Length = 402
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ GY + G HAE+ AL A G +T Y+TLEPC
Sbjct: 46 FTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRXA---GEKAKGATAYVTLEPC 102
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ + DPNP V+G+G+ +L AGI V GL EA ++N
Sbjct: 103 SHHGRTPPCCDALIAAGVARVVASXQDPNPQVAGRGLYRLQQAGIDVSHGLXXSEAEQLN 162
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF R + G P++++K+ +SLD +T+ + SQWITS ++R D + RA+S AILT
Sbjct: 163 KGFLKRXRTGFPYIQLKLGASLDGRTAXASGESQWITSPQARRDVQLLRAQSHAILT 219
>gi|406597424|ref|YP_006748554.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii ATCC
27126]
gi|406374745|gb|AFS38000.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii ATCC
27126]
Length = 379
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 121/186 (65%), Gaps = 4/186 (2%)
Query: 6 QQAKLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAA-AQGYDVYNST 63
QQ + + +SPNPRVGCVIV E +++ GY G HAE+ AL +A+ A+ +T
Sbjct: 21 QQGRFT--TSPNPRVGCVIVDENNQLLGQGYHIQAGTPHAEVHALRHASNARPQGAKGAT 78
Query: 64 VYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLM 123
Y+TLEPCS+FG TPPC AL+++ + +V+IA+ DPNP V G G++ L AGI V +M
Sbjct: 79 AYVTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGNGISILQEAGIEVVSEVM 138
Query: 124 QKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARS 183
EA +N GF RM G P+VR+K+ SLD K +L N SQWIT E+R D +RA+S
Sbjct: 139 AAEAAALNPGFIKRMLTGEPFVRVKLGISLDGKIALQNGVSQWITGAEARRDVQQYRAQS 198
Query: 184 CAILTG 189
C +LTG
Sbjct: 199 CVVLTG 204
>gi|260914242|ref|ZP_05920715.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC
43325]
gi|260631875|gb|EEX50053.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC
43325]
Length = 377
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL A+ ++PNP VGCV+VK+ I+ G+ G HAE+ AL +A Q
Sbjct: 12 MQMALDLAQQGQFTTTPNPSVGCVLVKDGSIVGKGFHFKAGEPHAEVMALRDAGEQAK-- 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + LI++G+ +V+ A+ DPNP V+GKG+ L GI
Sbjct: 70 -GATAYVTLEPCSHFGRTPPCAKGLIEAGVARVVSAMRDPNPQVAGKGLQMLAEQGIESA 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N GF RM+ G P+V++K+A SLD +T+L N S+WITS+ SR D +
Sbjct: 129 VGLLEEKAEWLNRGFLKRMRTGKPFVQLKMAMSLDGRTALANGESKWITSELSRQDVQVE 188
Query: 180 RARSCAILTG 189
RA++ AIL+
Sbjct: 189 RAKASAILSA 198
>gi|42520555|ref|NP_966470.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410294|gb|AAS14404.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 360
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M++AL+ A+ ++ N +PNP VGC+IVK+ I+S GYT G HAE+ AL NA
Sbjct: 7 MSIALRLAEKNLGNVAPNPAVGCIIVKDGTIVSEGYTGIGGRPHAEVVALQNAKDS---T 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T+YITLEPC + G T PCT +IK+ IK+V+IA DP+ VSG+G+ L AGI V+
Sbjct: 64 HGATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGRGMKALKEAGIEVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QG+MQKEA E+N+GFF+ + P++ K+A++LD K + + S+WITS+ +RN H
Sbjct: 124 QGIMQKEAKELNVGFFTTKELHRPFIACKVATTLDGKIATFTGDSKWITSENTRNWVHEL 183
Query: 180 RARSCAILTGKN 191
R + AI+ G N
Sbjct: 184 RTKYDAIMIGSN 195
>gi|134105070|pdb|2O7P|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli In
Complex With The Oxidised Nadp+ Cofactor In The Active
Site Of The Reductase Domain
gi|134105071|pdb|2O7P|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli In
Complex With The Oxidised Nadp+ Cofactor In The Active
Site Of The Reductase Domain
Length = 380
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+ PNP VGCVIVK+ I+ GY + G HAE+ AL A G +T Y+TLEPC
Sbjct: 24 FTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRXA---GEKAKGATAYVTLEPC 80
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +ALI +G+ +V+ + DPNP V+G+G+ +L AGI V GL EA ++N
Sbjct: 81 SHHGRTPPCCDALIAAGVARVVASXQDPNPQVAGRGLYRLQQAGIDVSHGLXXSEAEQLN 140
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
GF R + G P++++K+ +SLD +T+ + SQWITS ++R D + RA+S AILT
Sbjct: 141 KGFLKRXRTGFPYIQLKLGASLDGRTAXASGESQWITSPQARRDVQLLRAQSHAILT 197
>gi|403238146|ref|ZP_10916732.1| riboflavin biosynthesis protein RibD [Bacillus sp. 10403023]
Length = 362
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+LA+ AK + +SPNP VG VIV E R++ G G HAE+ A+ A G
Sbjct: 7 MSLAINVAKAGVGQTSPNPVVGAVIVNEGRVVGIGAHLKAGEPHAEVHAIRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+T Y+TLEPCS+ G TPPC + LI S +K+V+IA DPNPLV+GKG+A+L +AGI V+
Sbjct: 64 KNATAYVTLEPCSHHGKTPPCADLLITSNVKRVVIATTDPNPLVAGKGIAKLKAAGIEVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ +++A ++N F+ +++ +P+V +K A++LD K + S+WIT + +RND H++
Sbjct: 124 VGVCKEQADQLNAVFYHFLEKKLPYVTLKSATTLDGKIATVTGESKWITGEAARNDVHLY 183
Query: 180 RARSCAILTGKN 191
R+ AIL G N
Sbjct: 184 RSIHDAILVGVN 195
>gi|345016468|ref|YP_004818821.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344031811|gb|AEM77537.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 360
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNP VG VIVK +II GY + GG HAE++AL NA DV ST+++TLEPCS+
Sbjct: 19 TNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVE---DVKGSTMFVTLEPCSH 75
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
+G TPPC E +IKSGIK+V IA+ DPNP VSG G+ +L AGI V G+M+K+A ++N
Sbjct: 76 YGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVHVGMMEKDARKLNEI 135
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
F + P+V +K A S+D K + YN +S+WIT+++SR +H R R AI+ G N
Sbjct: 136 FVKYITTKFPFVILKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRGRVSAIMVGVN 193
>gi|408479233|ref|ZP_11185452.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. R81]
Length = 378
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVIV++ +I+ G+ + G HAE +AL A A+
Sbjct: 16 MARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNALRAAGAR---A 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G+TPPC +AL+ +G+ +V+ + DPNP V+G+G+ +L AGI V+
Sbjct: 73 RGATVYVTLEPCSHHGHTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEVR 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM+ G+P+VR+K+A SLD +T++ N SQWIT +R
Sbjct: 133 SGVLEAEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMANGESQWITGPAARAAVQRL 192
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 193 RAEASVVLTGAD 204
>gi|312128288|ref|YP_003993162.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
hydrothermalis 108]
gi|311778307|gb|ADQ07793.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
hydrothermalis 108]
Length = 371
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ AK S PNPRVGCVIVK II GY + G HAE+ A+ +A GY +
Sbjct: 10 MNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEKHAEVLAIEDAIKNGYSL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+T+Y++LEPC +FG PPCTEA+IKSGIKKV+IA DPNP V+GKG+ L GI V
Sbjct: 70 KNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVIATRDPNPFVNGKGIQILKQHGIEVV 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G+++KEA IN FF M+ GIP++ +K+A S+D K + +N ++E H
Sbjct: 130 EGVLEKEAESINKDFFKYMKTGIPYIAIKVAHSIDGKIATPSNKRFLFNTEEENVFVHSL 189
Query: 180 RARSCAILTGKN 191
R + A L N
Sbjct: 190 RQKYMATLVSVN 201
>gi|440509808|ref|YP_007347244.1| riboflavin biosynthesis protein RibD [Candidatus Blochmannia
chromaiodes str. 640]
gi|440454021|gb|AGC03513.1| riboflavin biosynthesis protein RibD [Candidatus Blochmannia
chromaiodes str. 640]
Length = 379
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
+T ALQ A K + PNP VGCVIV+ +II GY G HAEI AL A AQG
Sbjct: 13 LTRALQLAWKGRFTTMPNPNVGCVIVRNNKIIGEGYHIRAGDAHAEIHALRIAGNLAQG- 71
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T YITLEPCS++G TPPCT ALI +GIK+V++A+ DP+ G+G+ L AGI
Sbjct: 72 ----ATAYITLEPCSHYGRTPPCTTALINAGIKRVVVAMLDPHFYARGRGLHLLQQAGIE 127
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ LM EA IN GF R++ G PWV++K+A+SLD +T++ + S+WITS ++R D
Sbjct: 128 VQHSLMLPEAESINRGFLKRIRTGFPWVKLKLAASLDGRTAMSSGESKWITSIQARQDVQ 187
Query: 178 IWRARSCAILT 188
+RA S IL+
Sbjct: 188 CFRAESDVILS 198
>gi|289549140|ref|YP_003474128.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484]
gi|289182757|gb|ADC90001.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484]
Length = 353
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+L + PNP VGCV+VK+ +IIS GY + G HAE+ AL A G +
Sbjct: 1 MGRALELARLRKGLTHPNPTVGCVVVKDGKIISEGYHERAGAPHAEVVALSKA---GQNA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ST+Y+TLEPCS++G TPPCT A+I++G+K+V++A DPNP V G G+ +L +AGI V
Sbjct: 58 KDSTLYVTLEPCSHYGRTPPCTNAIIEAGVKRVVVATLDPNPKVMGSGIERLRAAGIQVD 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++EA ++N FF + + P++ +K A S+D + S+WITS+ESR +H
Sbjct: 118 VGVLEEEARQLNEDFFVYITQNRPYITLKWAQSIDGSLATKTGDSKWITSRESREFAHRL 177
Query: 180 RARSCAILTGKN 191
RA + AIL G N
Sbjct: 178 RAEATAILVGVN 189
>gi|148654182|ref|YP_001281275.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. PRwf-1]
gi|148573266|gb|ABQ95325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Psychrobacter sp. PRwf-1]
Length = 368
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+++AK + + PNP VGCVIV I+ GY G HAE+ AL A +
Sbjct: 34 MNLAIEEAKKGLFTTRPNPAVGCVIVNNNLIVGTGYHPQAGQPHAEVFALREAKD---NA 90
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI SG+ +V++A DPNP V+G+G+A L +AGI V
Sbjct: 91 KGATAYVTLEPCSHTGRTPPCAQALINSGVSRVVVAGLDPNPKVAGRGIAMLKAAGIEVT 150
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++A ++N+GF M+ +P+VR+KIASSLD +T++ + S+WIT +R D
Sbjct: 151 VGVSTQQAEQLNLGFLKAMRTQMPYVRLKIASSLDGRTAMASGESKWITGPAAREDVQKL 210
Query: 180 RARSCAILTG 189
RA S AI+TG
Sbjct: 211 RALSGAIITG 220
>gi|312134474|ref|YP_004001812.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
owensensis OL]
gi|311774525|gb|ADQ04012.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
owensensis OL]
Length = 371
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ AK S PNPRVGCVIVK II GY + G HAE+ A+ +A GY +
Sbjct: 10 MNMALELAKKASYLVLPNPRVGCVIVKNGTIIGKGYHQKYGEKHAEVLAIEDAIKNGYSL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+T+Y++LEPCS+FG PPCTEA+IKSGIKKV++A DPNP+V+GKG+ L GI V
Sbjct: 70 KNATMYVSLEPCSHFGKQPPCTEAIIKSGIKKVVVATRDPNPIVNGKGIQILKQHGIEVV 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G++QKEA +N FF M+ GIP++ +K+A S+D K + +N + + H
Sbjct: 130 EGVLQKEAEIVNKEFFKYMKTGIPYIAIKVAQSIDGKIATPSNKRFLFNTDDENVFVHSL 189
Query: 180 RARSCAILTGKN 191
R + A L N
Sbjct: 190 RQKYMATLVSVN 201
>gi|410667743|ref|YP_006920114.1| riboflavin biosynthesis protein RibD [Thermacetogenium phaeum DSM
12270]
gi|409105490|gb|AFV11615.1| riboflavin biosynthesis protein RibD [Thermacetogenium phaeum DSM
12270]
Length = 382
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A L +SPNP VG V+V++ II GY G HAE+ AL A G
Sbjct: 13 MSRALELAALGKGKTSPNPMVGAVVVRDDVIIGEGYHMKAGTPHAEVHAL---RAAGDLA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPC ++G TPPCTEA+IK+GI+KV+IA DPNPLV+GKG+ L AGI V+
Sbjct: 70 KGSTLYVTLEPCCHYGKTPPCTEAIIKAGIQKVVIATCDPNPLVAGKGIRSLKEAGIEVQ 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M++EA +N FF ++ G+P+V +K+A SLD K + + S+WIT +++R
Sbjct: 130 VGIMEEEAQRLNEAFFKYIRTGLPYVVLKVAMSLDGKIATCSGDSKWITGEKARLKVQHL 189
Query: 180 RARSCAILTG 189
RA S A++ G
Sbjct: 190 RAESDAVMVG 199
>gi|295696432|ref|YP_003589670.1| riboflavin biosynthesis protein RibD [Kyrpidia tusciae DSM 2912]
gi|295412034|gb|ADG06526.1| riboflavin biosynthesis protein RibD [Kyrpidia tusciae DSM 2912]
Length = 371
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A +SPNP VG VIVK+ ++ G GG HAE+ AL A G
Sbjct: 7 MRWALQLAASARGQTSPNPMVGAVIVKDGELVGQGAHLKAGGPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPC + G TPPC+ ALI+ G+ +V++A+ DPNPLV+G G+ +L AG+ V+
Sbjct: 64 RGATVYVTLEPCDHHGRTPPCSRALIEHGVARVVVAMVDPNPLVAGGGIRRLRQAGVKVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++K+A +N GF RM RG PWV KIA +LD + + S+WIT +++R H
Sbjct: 124 VGLLEKDARALNRGFIQRMTRGRPWVIAKIAMTLDAQIATRTGESRWITGEKAREKVHEL 183
Query: 180 RARSCAILTG 189
R+R A++TG
Sbjct: 184 RSRVDAVVTG 193
>gi|407684438|ref|YP_006799612.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'English Channel 673']
gi|407246049|gb|AFT75235.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'English Channel 673']
Length = 379
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 119/186 (63%), Gaps = 4/186 (2%)
Query: 6 QQAKLSINSSPNPRVGCVIVKEK-RIISCGYTKSPGGNHAEIDALLNAA-AQGYDVYNST 63
QQ + + +SPNPRVGCVIV E ++ GY G HAE+ AL A+ A+ +T
Sbjct: 21 QQGRFT--TSPNPRVGCVIVDENNHLLGQGYHIQAGTPHAEVHALRQASNARPQGAKGAT 78
Query: 64 VYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLM 123
Y+TLEPCS+FG TPPC AL+++ + +V+IA+ DPNP V G G++ L AGI V +M
Sbjct: 79 AYVTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGNGISILQEAGIEVVSEVM 138
Query: 124 QKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARS 183
EA +N GF RM G P+VR+K+ SLD K +L N SQWIT E+R D +RA+S
Sbjct: 139 AAEAAALNPGFIKRMLTGKPFVRVKLGISLDGKIALQNGVSQWITGAEARRDVQQYRAQS 198
Query: 184 CAILTG 189
C +LTG
Sbjct: 199 CVVLTG 204
>gi|83311440|ref|YP_421704.1| riboflavin biosynthesis protein ribD [Magnetospirillum magneticum
AMB-1]
gi|82946281|dbj|BAE51145.1| Riboflavin biosynthesis protein ribD [Magnetospirillum magneticum
AMB-1]
Length = 375
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + + PNP VGCVIVK+ R++ G+T+ G HAE +AL A G
Sbjct: 18 MRAALALARRGLGTVWPNPAVGCVIVKDGRVVGRGWTQPGGRPHAETEAL---AMAGSAA 74
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPC++ G T PC +AL+ +G+ +V++A+ DP+ V+GKGV +L AGI V
Sbjct: 75 LGATVYVTLEPCAHHGKTAPCADALVAAGVSRVVVAVQDPDSRVAGKGVDRLRVAGIPVT 134
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G++ EA E+N GFF R+ G P V +K+A++LD + + + S+WIT ++R+ +H+
Sbjct: 135 EGVLHAEAAELNAGFFLRINTGRPLVTLKLATTLDGRIATHTGESRWITGDQARSAAHLL 194
Query: 180 RARSCAILTGKN 191
RA + AI+ G
Sbjct: 195 RAETDAIMVGSG 206
>gi|170719753|ref|YP_001747441.1| riboflavin biosynthesis protein RibD [Pseudomonas putida W619]
gi|169757756|gb|ACA71072.1| riboflavin biosynthesis protein RibD [Pseudomonas putida W619]
Length = 376
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ I + PNPRVGCVIV++ ++ G+ G HAE+ AL A G
Sbjct: 13 MARALELARKGIYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ Y+TLEPCS+ G TPPC EAL+++G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 70 RGACAYVTLEPCSHHGRTPPCAEALVQAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ +A +N GF RM+ G+P+VR K+A SLD +T++ + SQWIT +R+
Sbjct: 130 SGVLEAQARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQRL 189
Query: 180 RARSCAILT 188
RA + +LT
Sbjct: 190 RASASVVLT 198
>gi|390933691|ref|YP_006391196.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569192|gb|AFK85597.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 360
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ AKL + +++PNP VG VIVK+ RII GY + GG HAE++AL NA DV
Sbjct: 5 MKRALQLAKLGVGHTNPNPLVGAVIVKDGRIIGEGYHEYYGGPHAEVNALKNAKE---DV 61
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPC + G TPPC +A+IKSGIK V IA+ DPN LV+GKG+ +L AG++V
Sbjct: 62 SGATLYVTLEPCCHHGKTPPCVDAVIKSGIKNVFIAMEDPNELVAGKGIKKLKEAGLNVY 121
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA ++N F + P+V +K A ++D K S + S+WIT+++SR H
Sbjct: 122 TGLLKDEAEKLNEVFIKYITSREPYVILKSAMTIDGKISTFTGDSKWITNEKSREHVHKV 181
Query: 180 RARSCAILTGKN 191
R AI+ G N
Sbjct: 182 RGSVMAIMAGIN 193
>gi|416073967|ref|ZP_11584383.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444344155|ref|ZP_21152452.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348007027|gb|EGY47373.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443544671|gb|ELT54616.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 374
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + L+++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ A+L+
Sbjct: 190 RAKASAMLS 198
>gi|365540557|ref|ZP_09365732.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
ordalii ATCC 33509]
Length = 365
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ AK + + PNP VGCVI + ++I+ G+ G HAE+ AL A Q
Sbjct: 10 MSRAIELAKGGVFTTQPNPNVGCVITQGEQIVGEGFHARAGEPHAEVHALRMAKEQAQ-- 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC E LI + + KVI A+ DPNP V+G+G+ L AGI V+
Sbjct: 68 -GATAYVTLEPCSHHGRTPPCAEGLINAKVAKVICAMQDPNPQVAGRGIQMLRDAGIEVE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N GF RM G+P+V++K+A+SLD +T+L N SQWITS +R D +
Sbjct: 127 VGLLEADAIALNPGFIKRMTSGMPFVQLKMAASLDGQTALNNGQSQWITSAAARRDVQKF 186
Query: 180 RARSCAILT 188
RA++ IL+
Sbjct: 187 RAKAGGILS 195
>gi|261867792|ref|YP_003255714.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415768374|ref|ZP_11483676.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|261413124|gb|ACX82495.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348657943|gb|EGY75521.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D17P-2]
Length = 374
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + L+++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ A+L+
Sbjct: 190 RAKASAMLS 198
>gi|312794193|ref|YP_004027116.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181333|gb|ADQ41503.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 371
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ AK S PNPRVGCVIVK II GY + G HAE+ A+ +A GY +
Sbjct: 10 MNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEKHAEVLAIEDAIKNGYLL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+T+Y++LEPC +FG PPCTEA+IKSGIKKV++A DPNPLV+G G+ L GI V
Sbjct: 70 KNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGIQILKQHGIEVV 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G++QKEA IN FF M++GIP+ +K+A S+D K + +N +++E H
Sbjct: 130 EGVLQKEAESINKDFFKYMKKGIPYTAIKVAQSIDGKIATPSNKRFLFSTEEENLFVHSL 189
Query: 180 RARSCAILTGKN 191
R + A L N
Sbjct: 190 RQKYMATLVSVN 201
>gi|416102894|ref|ZP_11589006.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444346719|ref|ZP_21154683.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|348008478|gb|EGY48750.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|443541537|gb|ELT51964.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 374
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + L+++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ A+L+
Sbjct: 190 RAKASAMLS 198
>gi|167038695|ref|YP_001661680.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X514]
gi|300913745|ref|ZP_07131062.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X561]
gi|307723238|ref|YP_003902989.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X513]
gi|166852935|gb|ABY91344.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X514]
gi|300890430|gb|EFK85575.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X561]
gi|307580299|gb|ADN53698.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X513]
Length = 360
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNP VG VIVK +II GY + GG HAE++AL NA +V ST+++TLEPCS+
Sbjct: 19 TNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVE---NVEGSTMFVTLEPCSH 75
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
+G TPPC E +IKSGIK+V IA+ DPNP VSG G+ +L AGI V G+M+KEA ++N
Sbjct: 76 YGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVHVGMMEKEARKLNEI 135
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
F + P+V +K A S+D K + YN +S+WIT+++SR +H R R AI+ G N
Sbjct: 136 FVKYITTKFPFVILKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRGRVSAIMVGVN 193
>gi|365967570|ref|YP_004949132.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|416089017|ref|ZP_11587862.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|444349221|ref|ZP_21156720.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|348009444|gb|EGY49592.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|365746483|gb|AEW77388.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443545175|gb|ELT55023.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 374
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + L+++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ A+L+
Sbjct: 190 RAKASAMLS 198
>gi|88704437|ref|ZP_01102151.1| Riboflavin biosynthesis protein ribD [Congregibacter litoralis
KT71]
gi|88701488|gb|EAQ98593.1| Riboflavin biosynthesis protein ribD [Congregibacter litoralis
KT71]
Length = 377
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
+ PNP VGCV+V++ ++ G+T+ GG+HAEI AL A G ST Y+TLEPC++
Sbjct: 32 ARPNPHVGCVLVRDSTVVGEGFTQPAGGDHAEIMAL---KAAGDAARGSTAYVTLEPCAH 88
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
G TPPC ALI +G+ +V + + DPNP V G G+ +L + G++V QGLM + G
Sbjct: 89 TGRTPPCCNALIAAGVARVFVGLRDPNPKVDGGGIHRLQAEGLAVHQGLMADQVEAQLAG 148
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
F R + G P +R+K+A SLD +T++ + SQWIT ++R D RA SCAILTG
Sbjct: 149 FLQRQRLGRPRLRIKLAMSLDGRTAMASGESQWITGPQARLDVQKLRAESCAILTG 204
>gi|383816728|ref|ZP_09972120.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Serratia sp. M24T3]
gi|383294440|gb|EIC82782.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Serratia sp. M24T3]
Length = 380
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 114/172 (66%), Gaps = 3/172 (1%)
Query: 9 KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITL 68
K ++PNP VGCVIV++ I+ GY GG HAE+ AL A Q +T Y+TL
Sbjct: 17 KGRFTTTPNPNVGCVIVRDGEIVGEGYHIKAGGPHAEVHALRMAGEQAR---GATAYVTL 73
Query: 69 EPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAY 128
EPCS+ G TPPC +AL+ +GI +V+ A+ DPNP V+G+G+ +L AG+ V GLM +A
Sbjct: 74 EPCSHHGRTPPCADALLNAGIIRVVAAMQDPNPEVAGRGLYRLRQAGVEVSNGLMLSQAE 133
Query: 129 EINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWR 180
+N+GF RM+ G P+V++K+A+SLD +T++ + SQWITS +R D +R
Sbjct: 134 AVNLGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSAAARQDVQRFR 185
>gi|416047285|ref|ZP_11575985.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347994201|gb|EGY35506.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
Length = 374
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + L ++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 190 RAKASAILS 198
>gi|256751435|ref|ZP_05492313.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
ethanolicus CCSD1]
gi|256749654|gb|EEU62680.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
ethanolicus CCSD1]
Length = 360
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+++PNP VG VIVK +II GY + GG HAE++AL NA DV ST+++TLEPCS
Sbjct: 18 HTNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVE---DVKGSTMFVTLEPCS 74
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC E +IKSGIK+V IA+ DPNP VSG G+ +L AGI V G+M+K+A ++N
Sbjct: 75 HYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVHVGIMEKKARKLNE 134
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
F + P+V +K A S+D K + YN +S+WIT+++SR +H R R AI+ G N
Sbjct: 135 IFVKYITTKFPFVIVKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRGRVSAIMVGVN 193
>gi|114319537|ref|YP_741220.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alkalilimnicola ehrlichii MLHE-1]
gi|114225931|gb|ABI55730.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Alkalilimnicola ehrlichii MLHE-1]
Length = 369
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Query: 16 PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSYFG 75
PNP VGCV+V++ I+ G+ + G HAE AL A Q +T Y+TLEPCS+ G
Sbjct: 28 PNPAVGCVLVRDGLIVGEGWHERAGEPHAEAMALHRAGEQ---ASGATAYVTLEPCSHHG 84
Query: 76 YTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIGFF 135
TPPC+EAL+ +G+ +V+ A+ DPNP V+G+G+ +L +AG+ V GLM ++A +N GF
Sbjct: 85 RTPPCSEALLAAGVVRVVAAMTDPNPQVAGRGLRRLRAAGLEVATGLMAEQAAALNPGFT 144
Query: 136 SRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
RM+ G PW+R+K A+SLD +T++ + S+WITS ++R D H WRARS A+LTG
Sbjct: 145 QRMRTGRPWLRLKSAASLDGRTAMASGESRWITSPQARADVHRWRARSDAMLTG 198
>gi|167036452|ref|YP_001664030.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320114877|ref|YP_004185036.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166855286|gb|ABY93694.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319927968|gb|ADV78653.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 360
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+++PNP VG VIVK +II GY + GG HAE++AL NA DV ST+++TLEPCS
Sbjct: 18 HTNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVE---DVKGSTMFVTLEPCS 74
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC E +IKSGIK+V IA+ DPNP VSG G+ +L AGI V G+M+K+A ++N
Sbjct: 75 HYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVHVGIMEKKARKLNE 134
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
F + P+V +K A S+D K + YN +S+WIT+++SR +H R R AI+ G N
Sbjct: 135 IFVKYITTKFPFVIVKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRGRVSAIMVGVN 193
>gi|315634417|ref|ZP_07889704.1| riboflavin biosynthesis protein RibD [Aggregatibacter segnis ATCC
33393]
gi|315477007|gb|EFU67752.1| riboflavin biosynthesis protein RibD [Aggregatibacter segnis ATCC
33393]
Length = 374
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK+ ++ G+ G HAE+ AL A G
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKDGEVVGKGFHAKAGEPHAEVMALREA---GEKA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + L+++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILSDAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++ A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEENAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARADVQQY 189
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 190 RAKASAILS 198
>gi|409201471|ref|ZP_11229674.1| riboflavin biosynthesis protein [Pseudoalteromonas flavipulchra
JG1]
Length = 370
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNP VGCVIVK+ I+ G G HAE+ AL A A+ +T Y+TLEPCS
Sbjct: 25 TTTPNPNVGCVIVKDGEIVGEGAHLKAGEGHAEVHALKQAGAK---AAGATAYVTLEPCS 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC + LI +G+ +V+ A+ DPNP V+G+G+A L +AGI+ GL++ +A +N
Sbjct: 82 HYGRTPPCAKGLIDAGVSRVVAAMVDPNPQVAGRGLAMLEAAGIATASGLLEPQARALNT 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF RM+ G+P+V K+A+S+D KT+L N S+WITS E+R D RA+SC +LTG +
Sbjct: 142 GFLKRMEYGLPFVTCKLAASVDGKTALNNGQSKWITSAEARLDVQRHRAQSCVVLTGAD 200
>gi|386715967|ref|YP_006182291.1| riboflavin biosynthesis protein RibD [Halobacillus halophilus DSM
2266]
gi|384075524|emb|CCG47019.1| riboflavin biosynthesis protein RibD [Halobacillus halophilus DSM
2266]
Length = 371
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A ++ +SPNP VG +++K+ ++ G G HAE+ AL A G
Sbjct: 8 MKTAIQMAGETVGQTSPNPSVGAIVIKDNELVGLGVHVKAGEAHAEVHALQMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPCS++G TPPC +A+I +GIK+V+IA +DPNP VSGKG+ + AGI V+
Sbjct: 65 KGAEIYVTLEPCSHYGKTPPCAKAIIDAGIKRVVIASHDPNPEVSGKGINMMREAGIEVE 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
++ +EA +N FF +Q G P+VR+K A SLD K + SQWIT KE+R D H +
Sbjct: 125 TNVLTEEADRLNKDFFHFIQTGEPYVRLKAAMSLDGKIATSTGESQWITGKEAREDGHTY 184
Query: 180 RARSCAILTG 189
R S AIL G
Sbjct: 185 RHISDAILVG 194
>gi|416054265|ref|ZP_11579136.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416070103|ref|ZP_11583546.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|444334408|ref|ZP_21149962.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|347999308|gb|EGY40151.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348003609|gb|EGY44182.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|443550439|gb|ELT58738.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 374
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + L ++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCSHFGRTPPCAKGLAEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 190 RAKASAILS 198
>gi|304315557|ref|YP_003850702.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777059|gb|ADL67618.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 356
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ AKL + +++PNP VG VIVK RII GY + GG HAEI+AL + DV
Sbjct: 1 MKRALQLAKLGLGHTNPNPLVGAVIVKNGRIIGEGYHEYYGGPHAEINALKSVKE---DV 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPC ++G TPPC +A++KSGIK V IA+ DPN LVSGKG+ L AG++V
Sbjct: 58 IGAQLYVTLEPCCHYGKTPPCVDAIVKSGIKDVFIAMEDPNKLVSGKGIKHLKEAGLNVY 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA +IN F + P+V +K A ++D K + Y S+WIT+++SR HI
Sbjct: 118 TGLLKEEAEKINEIFIKYITTKKPYVILKSAMTIDGKIATYTGDSKWITNEKSREHVHIM 177
Query: 180 RARSCAILTGKN 191
R AI+ G N
Sbjct: 178 RGCVMAIMVGVN 189
>gi|269839638|ref|YP_003324330.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC
BAA-798]
gi|269791368|gb|ACZ43508.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC
BAA-798]
Length = 364
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ ++ + PNP VG V+V++ +I G T+ PGG HAE+ AL A
Sbjct: 1 MRRALELAESALGRTWPNPAVGAVVVRDGLVIGKGATQPPGGPHAEVVALAEAGEA---A 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPCS++G TPPCTEA+I++G+++V A DPNP V G+GVAQL AGI V
Sbjct: 58 RGAILYVTLEPCSHWGRTPPCTEAIIRAGVREVHAATLDPNPKVHGRGVAQLREAGIEVH 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL ++EA IN GFF R++ G+P+V +K A +LD + + SS+WIT +E+R +H
Sbjct: 118 LGLCEREATRINEGFFKRVRTGLPFVTLKYAMTLDGRIATRTGSSKWITGEEARTCAHRL 177
Query: 180 RARSCAILTG 189
R R+ AI+ G
Sbjct: 178 RDRADAIMVG 187
>gi|424904867|ref|ZP_18328374.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
MSMB43]
gi|390929261|gb|EIP86664.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
MSMB43]
Length = 375
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 119/189 (62%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + + PNPRVGCVI + + + G+ + G HAE+ AL A G
Sbjct: 12 MAHALRLAEQGLYTTHPNPRVGCVIARGGQTLGTGWHRRAGEPHAEVHALSEA---GERA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++FG TPPC AL+ +G+ +V+IA DP V+G+G+A+L AGI V+
Sbjct: 69 RGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGIARLAGAGIVVE 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
QGL++ +A E+NIGFFSR++RG PW R K+ S+D + + ESR+D W
Sbjct: 129 QGLLEAQARELNIGFFSRIERGRPWTRAKLTVSIDRPLDAIDRTVLDAMRSESRDDIRHW 188
Query: 180 RARSCAILT 188
RARS +L+
Sbjct: 189 RARSSVVLS 197
>gi|304312168|ref|YP_003811766.1| riboflavin biosynthesis bifunctional
diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase oxidoreductase [gamma proteobacterium HdN1]
gi|301797901|emb|CBL46123.1| Riboflavin biosynthesis bifunctional RIBD:
diaminohydroxyphosphoribosylaminopyrimid ine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase
oxidoreductase protein [gamma proteobacterium HdN1]
Length = 389
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ ALQ A + + PNPRVGCVIV+ I+ G+ + G HAE+ AL A G
Sbjct: 14 MSRALQLAPRGLYTTHPNPRVGCVIVQNGAIVGEGWHQLAGQGHAEVLALEQA---GERA 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC+++G TPPC ALIK+GI +V+ A++DPNP VSG G L +AGI
Sbjct: 71 KGATAYVTLEPCAHYGRTPPCANALIKAGIARVVGAMSDPNPRVSGGGYGLLRAAGIKTD 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A +N GF RM+ G+PWVR+K S D +T++ SQWITS +R D
Sbjct: 131 NGLLKQQAEALNPGFIKRMRGGLPWVRVKSGISQDARTAMACGESQWITSSPARADVQRL 190
Query: 180 RARSCAILTG 189
RARS A++TG
Sbjct: 191 RARSEAVITG 200
>gi|415885142|ref|ZP_11547070.1| riboflavin biosynthesis protein RibD [Bacillus methanolicus MGA3]
gi|387590811|gb|EIJ83130.1| riboflavin biosynthesis protein RibD [Bacillus methanolicus MGA3]
Length = 371
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL A+ ++ +SPNP VG V+VK I+ G G HAE+ A+ A G
Sbjct: 7 MKLALSMARAAVGQTSPNPSVGAVVVKNGEILGMGAHLKAGTPHAEVHAIRTA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPCS++G TPPCTE +I SGIK+V++A DPNPLV+G GV QL AGI V+
Sbjct: 64 RGADLYVTLEPCSHYGKTPPCTELIISSGIKRVVVATLDPNPLVAGTGVKQLRQAGIEVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ + EA +IN FF +Q G P+V +K A +LD KT+ S+WITS ++R+D H
Sbjct: 124 VGVGKNEADQINEPFFHYIQTGKPYVTLKAAVTLDGKTATKTGDSKWITSAQARSDVHQL 183
Query: 180 RARSCAILTG 189
R AIL G
Sbjct: 184 RHEHDAILVG 193
>gi|418464420|ref|ZP_13035360.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359757216|gb|EHK91372.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 374
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK+ +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKDGKIVGKGFHFKAGDPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T Y+TLEPCS+FG TPPC + L+++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 HGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ ++A +N GF RM+ G P+V++K+A +D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLAEKAEALNKGFLKRMRTGKPFVQLKLAMGIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ A+L+
Sbjct: 190 RAKASAMLS 198
>gi|290474698|ref|YP_003467578.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Xenorhabdus bovienii SS-2004]
gi|289174011|emb|CBJ80798.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase [Xenorhabdus bovienii SS-2004]
Length = 369
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ AL+ A + +SPNP VGCVIV+ I+ G+ G HAE+ AL A G
Sbjct: 8 MSRALELANQGRFTTSPNPNVGCVIVQGDHIVGEGFHVCAGEPHAEVHALRMA---GGKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +GI +V+ A+ DPNP V+G+G+ +L AGI+V+
Sbjct: 65 KGATAYVTLEPCSHHGKTPPCADALIAAGISRVVAAMQDPNPQVAGRGLYKLQQAGIAVE 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++ EA +N GF RM+ G P++++K+ +SLD +T+L + S+WITS E+R D +
Sbjct: 125 HGVLMAEAEALNKGFLKRMRTGFPYLQLKMGASLDGRTALASGESKWITSPEARQDVQQF 184
Query: 180 RARSCAILT 188
RA+ AIL+
Sbjct: 185 RAQCSAILS 193
>gi|425901826|ref|ZP_18878417.1| riboflavin biosynthesis protein RibD [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397892858|gb|EJL09334.1| riboflavin biosynthesis protein RibD [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 377
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AK ++ PNPRVGCVIV++ +++ G+ G HAE+ AL A A
Sbjct: 15 MARALELAAKGRFSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRAAGAN---A 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVDAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATH 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M+++A +N GF RM++G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVMEQQARALNQGFLKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|54307992|ref|YP_129012.1| pyrimidine deaminase/pyrimidine reductase [Photobacterium profundum
SS9]
gi|46912418|emb|CAG19210.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
profundum SS9]
Length = 371
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGC+I + I+ G+ G HAE+ AL A G
Sbjct: 10 MLRAIELAKRGRFTTAPNPNVGCIIAQGATIVGEGFHYQAGQPHAEVFAL---RAAGEQA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +ALI + + +V+ A+ DPNP V G+G+ L AGI V+
Sbjct: 67 KGATAYVTLEPCSHFGRTPPCAQALINANVSRVVCAMVDPNPKVGGRGIEMLKIAGIEVQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ +A +N GF RM+ G+P+V++K+A+SLD +T+L N S+WIT E+R D +
Sbjct: 127 TGLLAADAQALNFGFIKRMKTGLPYVQLKLAASLDGRTALSNGESKWITGPEARADVQRF 186
Query: 180 RARSCAILT 188
RAR+ AIL+
Sbjct: 187 RARAGAILS 195
>gi|407716845|ref|YP_006838125.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Cycloclasticus sp. P1]
gi|407257181|gb|AFT67622.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Cycloclasticus sp. P1]
Length = 370
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A L S+ PNP VGCVIV E +I+ G+ K G HAE+ AL +AAA
Sbjct: 11 MNRALELAALGRYSTKPNPCVGCVIVDEGHVIAEGWHKKAGEPHAEVYALQSAAAA---A 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC + LI +G+ +V+IA+ DPNP+VSG+GVA+L +AGI V
Sbjct: 68 KGATAYVTLEPCSHHGRTPPCADGLINAGVSRVVIAMQDPNPIVSGQGVAKLQAAGIEVA 127
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL +++A +N F+ RM G P++ K+A SLD KT++ + SQWIT +R D H
Sbjct: 128 VGLFEEQAIALNQAFYHRMTTGQPYIFSKVAMSLDGKTAMASGESQWITGAAARKDVHQL 187
Query: 180 RARSCAILTG 189
RA S +LTG
Sbjct: 188 RAESDIVLTG 197
>gi|113461193|ref|YP_719262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Haemophilus somnus 129PT]
gi|112823236|gb|ABI25325.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Haemophilus
somnus 129PT]
Length = 376
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ AK I ++PNP VGCV+VK I+ G+ G HAE+ AL +A G
Sbjct: 13 MQIALELAKKGIFTTTPNPAVGCVLVKNGEIVGRGFHFKAGQPHAEVMALRDA---GDRA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + LI++GI+ VI+A+ DPNP V+GKG+A L +AGI
Sbjct: 70 KGATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGLAMLQAAGIESA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q++A +N GF +RM+ P+V +K+A SLD +T++ N S+WI+ +++R D
Sbjct: 130 VGLLQEKAELLNKGFLTRMRTQKPFVILKMAISLDGRTAMANGESKWISGEQARQDVQQE 189
Query: 180 RARSCAILT 188
RA+ AIL+
Sbjct: 190 RAKVSAILS 198
>gi|90410896|ref|ZP_01218910.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
profundum 3TCK]
gi|90328109|gb|EAS44420.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
profundum 3TCK]
Length = 371
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A++ AK ++PNP VGCVI + I+ G+ G HAE+ AL A G
Sbjct: 10 MLRAIELAKRGRFTTAPNPNVGCVIAQGSTIVGEGFHYQAGQPHAEVFAL---RAAGEQT 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC +ALI + + +V+ A+ DPNP V G+G+ L AGI V+
Sbjct: 67 KGATAYVTLEPCSHFGRTPPCAQALINANVSRVVCAMVDPNPKVGGRGIEMLQIAGIEVQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ +A +N GF RM+ G+P+V++K+A+SLD +T+L N S+WIT E+R D +
Sbjct: 127 TGLLAADAQALNPGFIKRMKTGLPYVQLKLAASLDGRTALSNGDSKWITGPEARADVQRF 186
Query: 180 RARSCAILT 188
RAR+ AIL+
Sbjct: 187 RARAGAILS 195
>gi|269103255|ref|ZP_06155952.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163153|gb|EEZ41649.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 378
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 9 KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITL 68
K ++PNP VGCVIV +I+ G+ G HAE+ AL A G +T Y+TL
Sbjct: 19 KGRFTTAPNPNVGCVIVNNGQIVGEGFHYRAGLPHAEVFAL---RAAGDKARGATAYVTL 75
Query: 69 EPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAY 128
EPCS++G TPPC ALI++GI +V+ A+ DPNP V+G GV L +AG++V+ GL++++A
Sbjct: 76 EPCSHYGRTPPCALALIEAGISRVVCAMVDPNPKVAGNGVTLLQNAGVTVEVGLLEQDAK 135
Query: 129 EINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
+N+GF MQ G+P+V++K+ASSLD +T+L N S+WIT ++R D +RA++ AIL+
Sbjct: 136 ALNLGFIKAMQTGMPYVQLKMASSLDGRTALANGESKWITGPQARADVQHFRAQAGAILS 195
>gi|297543534|ref|YP_003675836.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841309|gb|ADH59825.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 360
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 14 SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSY 73
++PNP VG VIVK +II GY + GG HAE++AL NA +V ST+++TLEPCS+
Sbjct: 19 TNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVE---NVEGSTMFVTLEPCSH 75
Query: 74 FGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIG 133
+G TPPC E +IKSGIK+V IA+ DPNP VSG G+ +L AGI V G+M+KEA ++N
Sbjct: 76 YGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVHVGMMEKEARKLNEI 135
Query: 134 FFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
F + P+V +K A S+D K + YN +S+WIT+ +SR +H R R AI+ G N
Sbjct: 136 FVKYITTKFPFVILKSAMSIDGKIACYNGNSKWITNGKSREFAHKIRGRVSAIMVGVN 193
>gi|336123489|ref|YP_004565537.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
anguillarum 775]
gi|335341212|gb|AEH32495.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
anguillarum 775]
Length = 365
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M+ A++ AK + + PNP VGCVI + ++I+ G+ G HAE+ AL A Q
Sbjct: 10 MSRAIELAKGGVFTTQPNPNVGCVISQGEQIVGEGFHVRAGEPHAEVHALRMAKEQAQ-- 67
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC E LI + + KVI A+ DPNP V+G+G+ L AGI V+
Sbjct: 68 -GATAYVTLEPCSHHGRTPPCAEGLINAKVAKVICAMQDPNPQVAGRGIQMLHDAGIEVE 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ +A +N GF RM G+P+V++K+A+SLD +T+L N SQWITS +R D +
Sbjct: 127 VGLLEADAIALNPGFIKRMTSGMPFVQLKMAASLDGQTALNNGQSQWITSAAARRDVQKF 186
Query: 180 RARSCAILT 188
RA++ IL+
Sbjct: 187 RAKAGGILS 195
>gi|154250091|ref|YP_001410916.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum
Rt17-B1]
gi|154154027|gb|ABS61259.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum
Rt17-B1]
Length = 365
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA+ AK I +PNP VG VIVK+ +I+S GY K GG HAE DA+L+A G D+
Sbjct: 14 MKLAIVIAKKGIGFVNPNPPVGAVIVKDGKILSMGYHKYYGGYHAERDAILSALNAGIDI 73
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+Y+TLEPC ++G TPPCT+ +I+SGIK+V IA DPNP +SG G +L G+ V
Sbjct: 74 SGSTMYVTLEPCDHYGKTPPCTDLIIQSGIKEVYIACTDPNP-ISGNGAEKLRKNGVDVH 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA E+ FF ++ GIP+V +K A++LD K + N +S+WIT E R H
Sbjct: 133 IGLLEEEARELAKFFFKSVETGIPYVTLKYAATLDGKIADVNGNSKWITD-ELRKVVHKL 191
Query: 180 RARSCAILTG 189
R+ A+L G
Sbjct: 192 RSEHMAVLVG 201
>gi|188996871|ref|YP_001931122.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931938|gb|ACD66568.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 371
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAKLSIN-SSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL AK+ + PNP VG VIVK+ +II GY G HAE +A+ +A +GYD+
Sbjct: 11 MKIALDLAKIRKGLTHPNPTVGAVIVKDGKIIGKGYHTKAGMPHAEREAIKDAKEKGYDL 70
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
ST+++TLEPC ++G TPPCT A+I+ GI +++I + D NP+V G+GV L S GI V
Sbjct: 71 KGSTMFVTLEPCCHYGRTPPCTNAIIEEGISEIVIGVLDQNPVVKGQGVNILKSHGIKVI 130
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++KE +IN FF+ ++ P+V +K+A S D K + S+WITS++SR +H
Sbjct: 131 TGVLEKECEKINEDFFTYIKEKRPFVHLKVAQSFDGKIATKTGDSKWITSEKSRQFAHQL 190
Query: 180 RARSCAILTGKN 191
R + AIL G N
Sbjct: 191 RKEASAILVGTN 202
>gi|52425429|ref|YP_088566.1| RibD protein [Mannheimia succiniciproducens MBEL55E]
gi|52307481|gb|AAU37981.1| RibD protein [Mannheimia succiniciproducens MBEL55E]
Length = 373
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ A K ++PNP VGCV+VK+ I+ G+ G HAE+ A+ A G +
Sbjct: 12 MQLAIELAEKGQFTTTPNPSVGCVLVKQGEIVGKGFHFKAGEPHAEVMAMREA---GKNA 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + LI++G+ KVI A+ DPNP V+G+G+ L AGI
Sbjct: 69 KGATAYVTLEPCSHFGRTPPCAKGLIEAGVVKVIAAMEDPNPSVAGQGLKMLQQAGIETA 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q++A +N GF RM+ G+P+V++K+A ++D +T+ SQWIT + +R D
Sbjct: 129 VGLLQEQAERLNRGFLKRMRTGLPYVQLKMAMTIDGRTATSTGESQWITGESARIDVQQE 188
Query: 180 RARSCAILTG 189
RA++ AIL+
Sbjct: 189 RAKASAILSA 198
>gi|399006287|ref|ZP_10708814.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM17]
gi|398122453|gb|EJM12045.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM17]
Length = 377
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AK ++ PNPRVGCVIV++ +++ G+ G HAE+ AL A A
Sbjct: 15 MARALELAAKGRFSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRAAGAN---A 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI+
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVDAGVARVVAAMQDPNPEVAGRGLQRLAQAGIATH 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M+++A +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVMEQQARALNQGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA++ +LTG +
Sbjct: 192 RAQASVVLTGAD 203
>gi|312110361|ref|YP_003988677.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1]
gi|336234823|ref|YP_004587439.1| riboflavin biosynthesis protein RibD [Geobacillus
thermoglucosidasius C56-YS93]
gi|423719379|ref|ZP_17693561.1| riboflavin biosynthesis protein ribD [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215462|gb|ADP74066.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1]
gi|335361678|gb|AEH47358.1| riboflavin biosynthesis protein RibD [Geobacillus
thermoglucosidasius C56-YS93]
gi|383367684|gb|EID44960.1| riboflavin biosynthesis protein ribD [Geobacillus thermoglucosidans
TNO-09.020]
Length = 361
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ AK I +SPNP VG V+V I+ G G HAE+ A+ A G
Sbjct: 8 MRLAIEMAKAGIGQTSPNPIVGAVVVNSGEIVGFGAHLKAGEPHAEVHAIRMA---GEKA 64
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS++G TPPC + LI +G+++V+IA DPNPLV+GKG+ +L +AGI VK
Sbjct: 65 KGATVYVTLEPCSHYGKTPPCADLLIDAGVRRVVIATTDPNPLVAGKGIEKLRNAGIDVK 124
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++EA E+N FF + P+V +K ASSLD K + S+WITS+ +R D H +
Sbjct: 125 LGVLKEEADELNRVFFHYIATKTPFVTLKYASSLDGKIATATGESKWITSEAAREDVHRY 184
Query: 180 RARSCAILTG 189
RA AIL G
Sbjct: 185 RAVHDAILVG 194
>gi|261346387|ref|ZP_05974031.1| riboflavin biosynthesis protein RibD [Providencia rustigianii DSM
4541]
gi|282565705|gb|EFB71240.1| riboflavin biosynthesis protein RibD [Providencia rustigianii DSM
4541]
Length = 371
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
+SPNP VGCVIV++ ++ GY + G HAE+ AL A G +T Y+TLEPC
Sbjct: 21 FTTSPNPNVGCVIVRDGEVVGEGYHQKAGEPHAEVHALRMA---GDKARGATAYVTLEPC 77
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC EALIK+G+ +V+ ++ DPNP V+G+G+ L AGI ++ ++A +N
Sbjct: 78 SHHGRTPPCAEALIKAGVSRVVASMQDPNPQVAGRGLYMLSQAGIETSSNILLEQAEALN 137
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF RM+ P++++K+A+SLD KT+L + S+WITS +R D + RA++ AIL+ N
Sbjct: 138 RGFLKRMRTAFPYIQLKLAASLDGKTALESGESKWITSPAARKDVQVLRAQASAILSTSN 197
>gi|433459946|ref|ZP_20417582.1| riboflavin biosynthesis protein RibD [Halobacillus sp. BAB-2008]
gi|432192062|gb|ELK48975.1| riboflavin biosynthesis protein RibD [Halobacillus sp. BAB-2008]
Length = 378
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M++A++ A ++ +SPNP V V+VK+ +++ G G HAE+ AL A G
Sbjct: 23 MSMAVEMASSTVGQTSPNPSVAAVVVKDNQVVGVGVHVKAGEAHAEVHALRMA---GEKA 79
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPCS+ G TPPC +A+I +GI++VIIA +DPNP VSG+G+ + + G+ V+
Sbjct: 80 DGAEIYVTLEPCSHHGRTPPCAQAVIDAGIRRVIIASHDPNPRVSGRGIEMMRAHGLEVE 139
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA ++N FF +Q G+P+VR+K A SLD K + SQWIT +++R D H +
Sbjct: 140 MGVLKAEADKLNRAFFHSIQTGMPYVRLKSAMSLDGKIATSTGESQWITGEKARADGHRY 199
Query: 180 RARSCAILTGKN 191
R S AIL G N
Sbjct: 200 RHLSDAILVGIN 211
>gi|114562213|ref|YP_749726.1| riboflavin biosynthesis protein RibD [Shewanella frigidimarina
NCIMB 400]
gi|114333506|gb|ABI70888.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella frigidimarina NCIMB 400]
Length = 381
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 118/177 (66%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
+ PNP VGCVIV + +II GY + G HAE++AL G +T Y+TLEPCS
Sbjct: 25 TTRPNPCVGCVIVYQNKIIGEGYHQRAGQGHAEVNALKMVHDNGLSAEGATAYVTLEPCS 84
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC LI + + +V++A+ D NP VSG+G+ L AG+ V GL+ ++AY++N+
Sbjct: 85 HYGRTPPCALGLINAKVARVVVAVTDANPEVSGRGITLLREAGVEVDVGLLCEQAYDLNL 144
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM+ G+PW+ +KIA+SLD KT+L N S+WIT +R D +RA CA++TG
Sbjct: 145 GFMKRMKTGLPWITVKIAASLDGKTALSNGVSKWITGSAARADVQKYRASHCALITG 201
>gi|416051830|ref|ZP_11577853.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992642|gb|EGY34027.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 374
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK+ I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKDGNIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +T Y+TLEPCS+FG TPPC + L+++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 HGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+ ++A +N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLAEKAEVLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ A+L+
Sbjct: 190 RAKASAMLS 198
>gi|429109218|ref|ZP_19170988.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter malonaticus 507]
gi|426310375|emb|CCJ97101.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter malonaticus 507]
Length = 209
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 117/182 (64%), Gaps = 4/182 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A + + PNPRVGCVIVK+ I+ G+ G HAE+ AL A G
Sbjct: 7 MARALKLAGQGRFTTHPNPRVGCVIVKDGVIVGEGFHLRAGEPHAEVHALRMA---GDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 RGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RA 181
RA
Sbjct: 184 RA 185
>gi|336451476|ref|ZP_08621913.1| riboflavin biosynthesis protein RibD [Idiomarina sp. A28L]
gi|336281289|gb|EGN74569.1| riboflavin biosynthesis protein RibD [Idiomarina sp. A28L]
Length = 383
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 128/195 (65%), Gaps = 9/195 (4%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIV-----KEKRIISCGYTKSPGGNHAEIDALLNAAA 54
M AL+ A+ + PNP VGCVIV K I+ G+ G HAE++AL A
Sbjct: 14 MERALELAAQGRFTTHPNPNVGCVIVDFSAEKNGEIVGEGFHLKAGEAHAEVNALAEA-- 71
Query: 55 QGYDVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISA 114
G +T YITLEPC++ G TPPC +ALIK+ + +V++A+ DP P V+G GV +L A
Sbjct: 72 -GDRAKGATAYITLEPCNHTGRTPPCVDALIKADVARVVVAMEDPFPKVAGAGVKRLKKA 130
Query: 115 GISVKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRN 174
GI V+ GL++KEAY ++ GFF++ + P+V++K+A+SLD +T+L N S+WIT +++R
Sbjct: 131 GIKVEMGLLEKEAYAVSRGFFTQQKLKRPFVQLKMAASLDGRTALANGKSKWITERDARC 190
Query: 175 DSHIWRARSCAILTG 189
D + RA++ AILTG
Sbjct: 191 DVQVGRAQAGAILTG 205
>gi|170717790|ref|YP_001784854.1| riboflavin biosynthesis protein RibD [Haemophilus somnus 2336]
gi|168825919|gb|ACA31290.1| riboflavin biosynthesis protein RibD [Haemophilus somnus 2336]
Length = 376
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL AK I ++PNP VGCV+VK I+ G+ G HAE+ AL +A G
Sbjct: 13 MQIALDLAKKGIFTTTPNPAVGCVLVKNGEIVGRGFHFKAGQPHAEVMALRDA---GDRA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+FG TPPC + LI++GI+ VI+A+ DPNP V+GKG+A L +AGI
Sbjct: 70 KGATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGLAMLQAAGIESA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+Q++A +N GF +RM+ P+V +K+A SLD +T++ N S+WI+ +++R D
Sbjct: 130 VGLLQEKAELLNKGFLTRMRTQKPFVILKMAISLDGRTAMANGESKWISGEQARQDVQQE 189
Query: 180 RARSCAILT 188
RA+ AIL+
Sbjct: 190 RAKVSAILS 198
>gi|90579822|ref|ZP_01235630.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
angustum S14]
gi|90438707|gb|EAS63890.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
angustum S14]
Length = 374
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q AK ++PNP VGCVI I+ G+ G HAE+ AL A G
Sbjct: 10 MLRAIQLAKRGCFTTAPNPNVGCVIANGDEILGEGFHYRAGEPHAEVFALKQA---GVRA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALIKSG+ +VI A+ DPNPLV+G+GV L AG+ V+
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAEALIKSGVSRVICAMVDPNPLVAGRGVEMLQKAGVDVQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA IN F +M +P+V +K+ASSLD KT+L N S+WIT +R D
Sbjct: 127 VGLLKEEAQAINKAFIKQMTTKMPYVELKLASSLDGKTALANGESKWITGPYARADVQRH 186
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 187 RAQAGAILS 195
>gi|302871184|ref|YP_003839820.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
obsidiansis OB47]
gi|302574043|gb|ADL41834.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
obsidiansis OB47]
Length = 371
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ AK S PNPRVGCVIVK II GY + G HAE+ A+ +A G +
Sbjct: 10 MNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEKHAEVLAIEDAIKNGNSL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+T+Y++LEPC +FG PPCTEA+IKSGIKKVIIA DPNPLV+GKG+ L GI V
Sbjct: 70 KNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVIIATRDPNPLVNGKGIQILKQHGIEVV 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G++QKEA +N FF M++GIP++ +K+A S+D K + +N + + H
Sbjct: 130 EGVLQKEAESVNKEFFKYMKKGIPYIAIKVAQSIDGKIATPSNKRFLFNTDDENVFVHSL 189
Query: 180 RARSCAILTGKN 191
R + A L N
Sbjct: 190 RQKYMATLVSVN 201
>gi|268592074|ref|ZP_06126295.1| riboflavin biosynthesis protein RibD [Providencia rettgeri DSM
1131]
gi|291312469|gb|EFE52922.1| riboflavin biosynthesis protein RibD [Providencia rettgeri DSM
1131]
Length = 371
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A + A K +SPNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 9 MARAFELARKGRFTTSPNPNVGCVIVRDGTIVGEGYHQKAGEPHAEVHALRMA---GDKA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALIK+G+ +V+ A+ DPNP V+G+G+ L AGI +
Sbjct: 66 QGATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVAAMQDPNPQVAGRGLYMLSQAGIETR 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
++ +A N GF RM+ G P++++K+A+SLD KT+L + S+WITS +R D
Sbjct: 126 SNVLLNDAEAANRGFLKRMRTGFPYIQLKLAASLDGKTALESGESKWITSSAARKDVQAL 185
Query: 180 RARSCAILT 188
RA + AIL+
Sbjct: 186 RAEASAILS 194
>gi|71892014|ref|YP_277744.1| pyrimidine deaminase/reductase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796120|gb|AAZ40871.1| pyrimidine deaminase/reductase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 379
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 1 MTLALQQA-KLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
+T ALQ A K + PNP VGCVIV+ +II GY G HAEI AL A AQG
Sbjct: 13 LTRALQLAWKGRFTTMPNPNVGCVIVRNNKIIGEGYHIRAGEAHAEIHALRIAGNLAQG- 71
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T YITLEPCS++G TPPCT ALI +GIK+V++A+ DP+ G+G+ L AGI
Sbjct: 72 ----ATAYITLEPCSHYGRTPPCTTALINAGIKRVVVAMLDPHFYARGRGLHLLQQAGIE 127
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ LM EA IN GF R++ G PWV++K+A+SLD +T++ + S+WITS ++R D
Sbjct: 128 VQHSLMLPEAESINRGFLKRIRTGFPWVKLKLAASLDGRTAMSSGESKWITSIQARQDVP 187
Query: 178 IWRARSCAILT 188
+RA S IL+
Sbjct: 188 RFRAESDVILS 198
>gi|359396874|ref|ZP_09189924.1| Riboflavin biosynthesis protein ribD [Halomonas boliviensis LC1]
gi|357968668|gb|EHJ91117.1| Riboflavin biosynthesis protein ribD [Halomonas boliviensis LC1]
Length = 394
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A + + PNPRVGCVIV++++I+ G+ G HAEI AL +A G
Sbjct: 13 MARALQLALKGLYTTDPNPRVGCVIVRDEQIVGEGFHLRAGEPHAEIHALNDA---GERA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC AL + + +V+IA+ DPNP VSG+G+ L G+ V
Sbjct: 70 QGATAYVTLEPCSHTGRTGPCAVALKDASVSRVVIAMVDPNPQVSGRGIRMLKEGGVEVA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF +RM P+VR+K+A SLD +T++ + SQWIT E+R
Sbjct: 130 VGLLESEARSLNPGFIARMSHQRPFVRLKMAMSLDGRTAMGSGESQWITGPEARTQVQRL 189
Query: 180 RARSCAILTG 189
RARS AIL+G
Sbjct: 190 RARSSAILSG 199
>gi|344200811|ref|YP_004785137.1| riboflavin biosynthesis protein RibD [Acidithiobacillus ferrivorans
SS3]
gi|343776255|gb|AEM48811.1| riboflavin biosynthesis protein RibD [Acidithiobacillus ferrivorans
SS3]
Length = 367
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++ PNP VG V+VK+ ++ G G HAE+ AL A G+ +T Y+TLEPCS
Sbjct: 24 STHPNPCVGAVLVKDGFVVGRGAHLQAGKAHAEMFALAEA---GHAARGATAYVTLEPCS 80
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
+ G TPPC +ALI +G+ +V+IA+ DPNPLV+G+GV +L +AG+ V++G + A +N
Sbjct: 81 HQGRTPPCADALIAAGVARVVIAMRDPNPLVAGRGVERLRAAGVVVEEGCLAAAAEALNP 140
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
GF RM+ G PW+R+K A SLD + +L N SQW+T +R D RAR+ AIL G
Sbjct: 141 GFLQRMRHGRPWMRLKQAMSLDGRVALANGQSQWLTGAAARADVQQERARASAILVG 197
>gi|359782233|ref|ZP_09285455.1| riboflavin biosynthesis protein RibD [Pseudomonas psychrotolerans
L19]
gi|359370026|gb|EHK70595.1| riboflavin biosynthesis protein RibD [Pseudomonas psychrotolerans
L19]
Length = 374
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 129/192 (67%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
MT AL A L +++PNPRVGCVIV++ +++ G+ + GG HAE+ AL A G
Sbjct: 13 MTRALALAALGRYSTAPNPRVGCVIVRDGQVVGEGWHRQAGGPHAEVHALRQA---GEAA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNPLV+G+G+A+L +AGI+ +
Sbjct: 70 RGATAYVTLEPCSHHGRTPPCADALVAAGVAEVVAAMTDPNPLVAGRGLARLAAAGIATR 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N GF RM G P+VR+K+A SLD +T++ N SQWIT +R
Sbjct: 130 AGVLEAEARALNAGFIQRMLTGRPFVRVKLALSLDGRTAMANGESQWITGPAARQSVQRL 189
Query: 180 RARSCAILTGKN 191
RA + ++TG +
Sbjct: 190 RAEAGVVITGAD 201
>gi|389681899|ref|ZP_10173243.1| riboflavin biosynthesis protein RibD [Pseudomonas chlororaphis O6]
gi|388554434|gb|EIM17683.1| riboflavin biosynthesis protein RibD [Pseudomonas chlororaphis O6]
Length = 377
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ AK ++ PNPRVGCVIV++ +++ G+ G HAE+ AL A A
Sbjct: 15 MARALELAAKGRFSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRAAGAN---A 71
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L GI+
Sbjct: 72 RGATAYVTLEPCSHHGRTPPCADALVDAGVARVVAAMQDPNPEVAGRGLQRLAQVGIATH 131
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+M++EA +N GF RM+ G+P+VR+K+A SLD +T++ + SQWIT +R+
Sbjct: 132 SGVMEQEARALNRGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQRL 191
Query: 180 RARSCAILTGKN 191
RA + +LTG +
Sbjct: 192 RAEASVVLTGAD 203
>gi|311030745|ref|ZP_07708835.1| riboflavin biosynthesis protein RibD [Bacillus sp. m3-13]
Length = 367
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+ AK + +SPNP VG V+VK I+ G G HAE++A+ A G D
Sbjct: 7 MKFAIDLAKRATGQTSPNPVVGSVVVKNGEIVGFGAHLRAGEAHAEVNAIQMA---GVDK 63
Query: 60 YN-STVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISV 118
N STVY+TLEPCS+FG TPPC++ LI+S + +V+IA DPNPLV+G+G+ +L AGI V
Sbjct: 64 ANGSTVYVTLEPCSHFGKTPPCSDLLIQSQVSRVVIASTDPNPLVAGRGIEKLRKAGIEV 123
Query: 119 KQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHI 178
+ G+ ++EA +N FF ++ G P+V +K A+SLD KT+ + N S+WIT +SR D H
Sbjct: 124 ELGVCEEEALALNQVFFHHIKTGKPFVTLKTAASLDGKTATHRNESKWITGPDSRLDVHQ 183
Query: 179 WRARSCAILTG 189
+R + AIL G
Sbjct: 184 YRHQHDAILVG 194
>gi|319645199|ref|ZP_07999432.1| RibD protein [Bacillus sp. BT1B_CT2]
gi|423682809|ref|ZP_17657648.1| riboflavin-specific deaminase [Bacillus licheniformis WX-02]
gi|317393008|gb|EFV73802.1| RibD protein [Bacillus sp. BT1B_CT2]
gi|383439583|gb|EID47358.1| riboflavin-specific deaminase [Bacillus licheniformis WX-02]
Length = 362
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL+ A+ + NP VG V+VK+ ++ G G HAE+ A+ A G
Sbjct: 7 MNLALELARQGEGQTGANPLVGAVVVKDGEVVGMGAHLKYGEAHAEVHAIQMA---GRHA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPCS++G TPPC E +I+SG+K+V++A DPNPLVSG+G+ L SAGI V+
Sbjct: 64 EGAVIYVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGIEMLRSAGIEVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++++A E+N F M+ G+P+V +K A+SLD KT+ S+WITS+E+R D+H +
Sbjct: 124 TGVLKEQAEELNEKFMHFMRTGLPYVTLKAAASLDGKTATATGDSKWITSEEARMDAHQY 183
Query: 180 RARSCAILTG 189
R IL G
Sbjct: 184 RKNHQCILVG 193
>gi|335039510|ref|ZP_08532670.1| riboflavin biosynthesis protein RibD [Caldalkalibacillus thermarum
TA2.A1]
gi|334180578|gb|EGL83183.1| riboflavin biosynthesis protein RibD [Caldalkalibacillus thermarum
TA2.A1]
Length = 365
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 125/194 (64%), Gaps = 8/194 (4%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAA--AQGY 57
M LALQ A+ S +SPNP VG VIVK+ I+ G G HAE+ AL A AQG
Sbjct: 10 MKLALQLAEATSGQTSPNPVVGAVIVKDFEIVGLGAHLKAGEAHAEVHALAMAKEKAQG- 68
Query: 58 DVYNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGIS 117
+T+Y+TLEPCS++G TPPC +A+I++GIK+V+IA DPNPLV G+GV +L +AG+
Sbjct: 69 ----ATMYVTLEPCSHYGRTPPCADAVIEAGIKRVVIAACDPNPLVRGRGVEKLKAAGLE 124
Query: 118 VKQGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSH 177
V+ GL +KEA +N F + P+V +K A++LD K + SQWIT +E+R D H
Sbjct: 125 VEVGLFKKEAERLNEIFNYYIVHRRPFVTLKTATTLDGKIATVTGESQWITGEEARADVH 184
Query: 178 IWRARSCAILTGKN 191
+ R R AIL G N
Sbjct: 185 LLRHRHDAILVGIN 198
>gi|423615551|ref|ZP_17591385.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD115]
gi|401260088|gb|EJR66261.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD115]
Length = 370
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 119/192 (61%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +ALQ AK S +SPNP VG V+VK+ I+ G G HAE+ AL A G
Sbjct: 7 MRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEEHAEVHALHMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+TVY+TLEPCS+FG TPPC E LI+ G+K+V+IA D NPLVSG G +L AGI V
Sbjct: 64 KNATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGHGKKKLEDAGIEVT 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N FF M+ P+V +K A SLD KT+ S+WIT +E+R D H +
Sbjct: 124 TGVLETEAVLLNRYFFHYMKTKRPFVTIKTAMSLDGKTATVTGESKWITGEEARADVHQY 183
Query: 180 RARSCAILTGKN 191
R AIL G N
Sbjct: 184 RHTHDAILVGVN 195
>gi|89073130|ref|ZP_01159669.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
sp. SKA34]
gi|89051083|gb|EAR56540.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
sp. SKA34]
Length = 374
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q AK ++PNP VGCVI I+ G+ G HAE+ AL A G
Sbjct: 10 MLRAIQLAKRGCFTTAPNPNVGCVIAIGDEILGEGFHYRAGEPHAEVFALKQA---GTRA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC EALIKSGI +VI A+ DPNPLV+G+GV L AG+ V+
Sbjct: 67 KGATAYVTLEPCSHYGRTPPCAEALIKSGISRVICAMVDPNPLVAGRGVEMLQKAGVDVQ 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL+++EA IN F +M +P+V +K+ASSLD KT+L N S+WIT +R D
Sbjct: 127 VGLLKEEAQAINKAFIKQMTTKMPYVELKLASSLDGKTALANGESKWITGPYARADVQRH 186
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 187 RAQAGAILS 195
>gi|52080843|ref|YP_079634.1| riboflavin-specific deaminase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404489726|ref|YP_006713832.1| riboflavin biosynthesis protein RibD [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52004054|gb|AAU23996.1| riboflavin-specific deaminase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348716|gb|AAU41350.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase RibD [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 362
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL+ A+ + NP VG V+VK+ ++ G G HAE+ A+ A G
Sbjct: 7 MNLALELARQGEGQTGANPLVGAVVVKDGEVVGMGAHLKYGEAHAEVHAIQMA---GRHA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPCS++G TPPC E +I+SG+K+V++A DPNPLVSG+G+ L SAGI V+
Sbjct: 64 EGAVIYVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGIEMLRSAGIEVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++++A E+N F M+ G+P+V +K A+SLD KT+ S+WITS+E+R D+H +
Sbjct: 124 TGVLKEQAEELNEKFMHFMRTGLPYVTLKAAASLDGKTATATGDSKWITSEEARMDAHQY 183
Query: 180 RARSCAILTG 189
R IL G
Sbjct: 184 RKNHQCILVG 193
>gi|323144123|ref|ZP_08078762.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT
12066]
gi|322416100|gb|EFY06795.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT
12066]
Length = 366
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ +SPNP VGCVIV+ II GY G HAEI A+ +A G V
Sbjct: 1 MKRALKLAARGKFTTSPNPAVGCVIVRNGMIIGEGYHHKAGEPHAEIMAMRSA---GSSV 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS++G TPPC +AL+K+G+K+V+IA DPNP V+G+GV L AGI V
Sbjct: 58 AGATCYVTLEPCSHYGRTPPCAKALVKAGVKRVVIACGDPNPQVAGRGVKILKDAGIEVD 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL + +A ++N FF + + IP+V +KI SLD K +L + S+WITS++SR
Sbjct: 118 VGLYENKALKLNRAFFKSIVKNIPYVTVKIGMSLDAKIALSDGRSKWITSEKSRQTVQKM 177
Query: 180 RARSCAILTG 189
RA S AI+TG
Sbjct: 178 RAASDAIITG 187
>gi|365848288|ref|ZP_09388765.1| riboflavin biosynthesis protein RibD [Yokenella regensburgei ATCC
43003]
gi|364570996|gb|EHM48595.1| riboflavin biosynthesis protein RibD [Yokenella regensburgei ATCC
43003]
Length = 367
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 119/189 (62%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ ++ G+ G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGVVVGEGFHYRAGEPHAEVHALRMA---GDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC EALI +G+ +V+ A+ DPNP V+G+G+ +L GI V
Sbjct: 64 NGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLHRLKEEGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA +N GF RM+ P++++K+ +SLD +T++ + SQWITS +R D
Sbjct: 124 HGLMMSEAELLNKGFLKRMRTAFPYIQLKLGASLDGRTAMASGESQWITSPAARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|331656468|ref|ZP_08357430.1| riboflavin biosynthesis protein RibD [Escherichia coli TA206]
gi|422368677|ref|ZP_16449082.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 16-3]
gi|432897199|ref|ZP_20108195.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE192]
gi|433027454|ref|ZP_20215330.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE109]
gi|315299580|gb|EFU58828.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 16-3]
gi|331054716|gb|EGI26725.1| riboflavin biosynthesis protein RibD [Escherichia coli TA206]
gi|431430009|gb|ELH11843.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE192]
gi|431545964|gb|ELI20607.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE109]
Length = 367
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATVYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|357416231|ref|YP_004929251.1| putative deaminase [Pseudoxanthomonas spadix BD-a59]
gi|355333809|gb|AER55210.1| putative deaminase [Pseudoxanthomonas spadix BD-a59]
Length = 364
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVI + ++ G+ + G HAE+ AL A A+
Sbjct: 12 MARALRLAERGAWTTKPNPMVGCVIAHGQTVVGEGFHQYAGQPHAEVFALGQAGAR---A 68
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPC++ G T PC +AL+ +G+ +V+ A+ DP P V G G +L +AGI+V+
Sbjct: 69 RGATVYVTLEPCAHTGRTGPCADALVAAGVSRVVTAMRDPFPQVDGAGFEKLRAAGIAVQ 128
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ + E+N GF S++ RG PW+R+K+ +S+D +T++ + S+WIT +R D W
Sbjct: 129 VGLLEAQVRELNRGFLSQVVRGRPWLRVKLGASVDGRTAMASGESKWITGAAARADVQRW 188
Query: 180 RARSCAILTG 189
RARS AILTG
Sbjct: 189 RARSGAILTG 198
>gi|410461189|ref|ZP_11314841.1| riboflavin biosynthesis protein RibD [Bacillus azotoformans LMG
9581]
gi|409925974|gb|EKN63172.1| riboflavin biosynthesis protein RibD [Bacillus azotoformans LMG
9581]
Length = 364
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQ-QAKLSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LA++ A + +SPNP VG V+VKE +I+ G G HAE+ A+ N A G
Sbjct: 7 MRLAIELAANTNGQTSPNPLVGAVVVKENQIVGMGAHLKAGEPHAEVHAI-NMA--GDKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPCS+ G TPPC + LIKS +K+V+IA DPNPLV+GKG+ +L AGI V
Sbjct: 64 KGATIYVTLEPCSHHGRTPPCADLLIKSEVKRVVIASTDPNPLVAGKGIEKLRKAGIEVD 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G++++EA ++N FF + G+P+V +K A+SLD K + + S+WITS+ESR D H +
Sbjct: 124 VGILREEAEQLNEVFFHYISTGMPYVTLKSATSLDGKIATVSGESKWITSEESRLDVHKY 183
Query: 180 RARSCAILTGKN 191
R + IL G N
Sbjct: 184 RHQHDGILVGVN 195
>gi|387929359|ref|ZP_10132036.1| riboflavin biosynthesis protein RibD [Bacillus methanolicus PB1]
gi|387586177|gb|EIJ78501.1| riboflavin biosynthesis protein RibD [Bacillus methanolicus PB1]
Length = 371
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL A+ ++ +SPNP VG V+VK I+ G G HAE+ A+ A G +
Sbjct: 7 MKLALSMARAAVGQTSPNPSVGAVVVKNGEILGMGAHLKAGTPHAEVHAIRTA---GENA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ +Y+TLEPCS++G TPPCTE +I +GIK+V++A DPNPLV+G G+ QL AGI V+
Sbjct: 64 RGADLYVTLEPCSHYGKTPPCTELIISAGIKRVVVATLDPNPLVAGSGIKQLRQAGIEVE 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ ++EA IN FF +Q G P+V +K A +LD KT+ S+WITS ++R+D H
Sbjct: 124 VGVGKEEADNINEPFFHYIQTGKPFVTLKAAVTLDGKTAAKTGDSKWITSTQARSDVHQL 183
Query: 180 RARSCAILTG 189
R AIL G
Sbjct: 184 RHEHDAILVG 193
>gi|387120051|ref|YP_006285934.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|416032844|ref|ZP_11572950.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|429732269|ref|ZP_19266884.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans Y4]
gi|347999491|gb|EGY40317.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|385874543|gb|AFI86102.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429156512|gb|EKX99142.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans Y4]
Length = 374
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC +FG TPPC + L ++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCFHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 190 RAKASAILS 198
>gi|427428215|ref|ZP_18918257.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Caenispirillum salinarum AK4]
gi|425882916|gb|EKV31595.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Caenispirillum salinarum AK4]
Length = 391
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL A+ + PNP VGCV+VK+ ++ G+T+ G HAE AL A G
Sbjct: 34 MGAALALARRGLGRVWPNPTVGCVVVKDGHVVGRGFTQPGGRPHAEPLAL---AMAGEAA 90
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+ + VY++LEPCS++G TPPC +AL+K+G+ +VI A DP+P VSG+G+A+L AGI V
Sbjct: 91 HGADVYVSLEPCSHYGKTPPCADALVKAGVARVIAAAVDPDPRVSGRGLARLREAGIEVV 150
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G+ + EA +N GFFSR++ G P V +K A++LD + +L + S+WIT E+R H+
Sbjct: 151 EGVRRDEAEALNAGFFSRVRTGRPLVTLKCATTLDGRIALASGESKWITGPEARRRGHLL 210
Query: 180 RARSCAILTGKN 191
R AIL G
Sbjct: 211 RCAHDAILIGSG 222
>gi|415754797|ref|ZP_11480731.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|348656134|gb|EGY71537.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 374
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M LAL AK ++PNP VGCV+VK +I+ G+ G HAE+ AL A G +
Sbjct: 13 MQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREA---GENA 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC +FG TPPC + L ++G+ KVI A+ DPNP V+GKG+ L AGI
Sbjct: 70 RGATAYVTLEPCFHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVAGKGLQILADAGIQSA 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++++A ++N GF RM+ G P+V++K+A S+D KT++ + S+WIT ++R D +
Sbjct: 130 VGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQY 189
Query: 180 RARSCAILT 188
RA++ AIL+
Sbjct: 190 RAKASAILS 198
>gi|229916731|ref|YP_002885377.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b]
gi|229468160|gb|ACQ69932.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b]
Length = 354
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSSP-NPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q AK + + NP VG V+VK+ RI+ G G HAE+ A+ A A Y
Sbjct: 5 MEQAIQLAKSADGQTGVNPLVGAVLVKDGRIVGMGAHLKAGEPHAEVHAIRMAGAAAY-- 62
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPCS+ G TPPC + +++SGIK+V+IA+ DPNPLV+G G+ +L +AG+ V
Sbjct: 63 -GATLYVTLEPCSHHGKTPPCADLIVESGIKRVVIAMKDPNPLVAGNGIMRLQAAGVEVD 121
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N F ++ P+V +K A+SLD K +L SQW+TS E+R D H
Sbjct: 122 VGLLEAEARALNPAFLRSLETKRPYVILKTATSLDGKVALETGESQWVTSSEARRDVHEL 181
Query: 180 RARSCAILTG 189
RA AILTG
Sbjct: 182 RATVDAILTG 191
>gi|392541629|ref|ZP_10288766.1| riboflavin biosynthesis protein [Pseudoalteromonas piscicida JCM
20779]
Length = 370
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 13 NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCS 72
++PNP VGCVIVK+ I+ G G HAE+ AL A A+ ++T Y+TLEPCS
Sbjct: 25 TTTPNPNVGCVIVKDGEIVGEGAHLKAGEGHAEVHALKQAGAK---AADATAYVTLEPCS 81
Query: 73 YFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINI 132
++G TPPC + LI +G+ +V+ A+ DPNP V+G+G+A L +AGI GL++ +A +N
Sbjct: 82 HYGRTPPCAKGLIDAGVSRVVAAMVDPNPQVAGRGLAMLEAAGIETAFGLLEPQARALNT 141
Query: 133 GFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTGKN 191
GF RM+ G+P+V K+A+SLD KT+L N S+WITS +R D RA+SC +LTG +
Sbjct: 142 GFLKRMEYGLPFVTCKLAASLDGKTTLTNGQSKWITSAAARLDVQRHRAQSCVVLTGAD 200
>gi|333895882|ref|YP_004469756.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111147|gb|AEF16084.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 360
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAKLSI-NSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ AKL + +++PNP VG VI+K+ RII GY + GG HAEI+AL NA DV
Sbjct: 5 MKRALQLAKLGVGHTNPNPLVGAVIIKDGRIIGEGYHEYYGGPHAEINALKNAKE---DV 61
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T+Y+TLEPC + G TPPC +A+IKSGIK V IA+ DPN LV+G+G+ +L AG++V
Sbjct: 62 NGATLYVTLEPCCHHGKTPPCVDAVIKSGIKNVFIAMEDPNELVAGRGIKKLEEAGLNVY 121
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA ++N F + P+V +K A ++D K S + S+WIT+++SR H
Sbjct: 122 TGLLKDEAEKLNEVFIKYITSREPYVILKSAMTIDGKISTFTGDSKWITNEKSREYVHKV 181
Query: 180 RARSCAILTGKN 191
R AI+ G N
Sbjct: 182 RGSVMAIMVGIN 193
>gi|307129900|ref|YP_003881916.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Dickeya dadantii 3937]
gi|306527429|gb|ADM97359.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Dickeya dadantii 3937]
Length = 370
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 128/189 (67%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ +SPNP VGCVIV++ I+ GY + G HAE+ AL A G
Sbjct: 10 MARALELARRGRFTTSPNPNVGCVIVRDDEIVGEGYHQKAGEPHAEVHALRMA---GDKA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +AL+ +G+ +V+ A+ DPNP V+G+G+ +L AGI V+
Sbjct: 67 RGATAYVTLEPCSHHGRTPPCADALLAAGVARVVAAMQDPNPQVAGRGLHRLQQAGIEVR 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
++ ++A +IN GF RM+ G P+V++K+ +SLD +T++ + SQWITS++SR D +
Sbjct: 127 HSVLMEQAEKINRGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSQQSRQDVQRF 186
Query: 180 RARSCAILT 188
RA+S AIL+
Sbjct: 187 RAQSSAILS 195
>gi|399909306|ref|ZP_10777858.1| riboflavin biosynthesis protein RibD [Halomonas sp. KM-1]
Length = 378
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M ALQ A+ + PNPRVGCV+VK ++++ G+ + G HAE+ AL
Sbjct: 10 MARALQLARRGRYTTHPNPRVGCVLVKNRKMVGEGWHERAGEPHAEVHAL---NMAQAAA 66
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G T PC AL ++G+K+V++A+ DPNP V+G+G+A L AGI V
Sbjct: 67 RGATAYVTLEPCSHHGRTGPCAVALTEAGVKRVVVAMQDPNPEVAGRGIAMLREAGIEVT 126
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GL++ EA +N GF SRM R P+VR+K+A SLD +T++ + SQWIT +R +
Sbjct: 127 VGLLEAEAQALNPGFISRMTRRRPFVRLKMAMSLDGRTAMQSGESQWITGPHARAEVQRL 186
Query: 180 RARSCAILTG 189
RA + AI+TG
Sbjct: 187 RASASAIMTG 196
>gi|359428136|ref|ZP_09219175.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. NBRC
100985]
gi|358236457|dbj|GAB00714.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. NBRC
100985]
Length = 366
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKL-SINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M A+Q A+L ++ PNP VGCVIVK+ ++I G+ G HAE+ AL A G +
Sbjct: 16 MQRAIQLARLGQYSTKPNPNVGCVIVKDGQLIGEGFHPQAGQPHAEVFALRQA---GENA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
++T Y+TLEPC+++G TPPC EAL+K+ +KKV++A DPNPLV+GKGV L AGI+V+
Sbjct: 73 KDATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACADPNPLVAGKGVKILQDAGIAVE 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ + A +N GF M G+P+VR+KIASSLD +T++ + S+WIT +R D W
Sbjct: 133 TGICEDIAKTLNFGFLKAMATGLPYVRLKIASSLDGRTAMASGESKWITGTAARQDVQHW 192
Query: 180 RARSCAILTG 189
RA S A++TG
Sbjct: 193 RAISAAVITG 202
>gi|254459689|ref|ZP_05073105.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium
HTCC2083]
gi|206676278|gb|EDZ40765.1| riboflavin biosynthesis protein RibD [Rhodobacteraceae bacterium
HTCC2083]
Length = 364
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 1 MTLALQQAKLSINSS-PNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL A+ + + PNP VGCVIV RI+ G+T+ G HAE+ AL+ A G
Sbjct: 9 MKMALSLARRGLGRTWPNPAVGCVIVNAGRIVGRGWTQVGGRPHAEVVALVQA---GKRA 65
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPC++ G TPPC+EALI++GI +V+ A+ D +P VSG+G AQL AG+ V+
Sbjct: 66 NGATAYVTLEPCAHHGQTPPCSEALIEAGIARVVAAMEDSDPRVSGRGFAQLRGAGVVVE 125
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+ K+A E N GFF + + G P+V +K+A SLD + + SQWIT E+R H
Sbjct: 126 TGICAKDAAESNAGFFLKTEVGRPFVTLKLALSLDGRIATLTGDSQWITGSEARRAVHAM 185
Query: 180 RARSCAILTG 189
RA A+L G
Sbjct: 186 RATHDAVLIG 195
>gi|383191267|ref|YP_005201395.1| riboflavin biosynthesis protein RibD [Rahnella aquatilis CIP 78.65
= ATCC 33071]
gi|371589525|gb|AEX53255.1| riboflavin biosynthesis protein RibD [Rahnella aquatilis CIP 78.65
= ATCC 33071]
Length = 382
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 114/177 (64%), Gaps = 3/177 (1%)
Query: 12 INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPC 71
++PNP VGCVIV I+ GY G HAE+ AL A G +T Y+TLEPC
Sbjct: 33 FTTTPNPNVGCVIVLNGEIVGEGYHLRAGEPHAEVHALRMA---GEKAKGATAYVTLEPC 89
Query: 72 SYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEIN 131
S+ G TPPC +AL+ +GI +V+ A+ DPNP V+G+G+ +L G+ V GLM +A +N
Sbjct: 90 SHHGRTPPCADALLAAGIARVVAAMQDPNPEVAGRGLYRLKQNGVDVSHGLMHPQAEAVN 149
Query: 132 IGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILT 188
+GF RM+ G P+V++K+ +S+D +T++ + SQWITS +R D +RA S AIL+
Sbjct: 150 LGFLKRMRTGFPYVQLKMGASIDGRTAMASGESQWITSAAARADVQRFRAESSAILS 206
>gi|344995633|ref|YP_004797976.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963852|gb|AEM72999.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
lactoaceticus 6A]
Length = 371
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL AK S PNPRVGCVIVK II GY + G HAE+ A+ +A GY +
Sbjct: 10 MNMALDLAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEKHAEVLAIEDAIKNGYLL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+T+Y++LEPC +FG PPCTEA+IKSGIKKV++A DPNPLV+G G+ L GI V
Sbjct: 70 KNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGIQILKQHGIEVV 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G++QKEA IN FF +++GIP+ +K+A S+D K + +N +++E H
Sbjct: 130 EGVLQKEAESINKDFFKYIKKGIPYTAIKVAQSIDGKIAKPSNKRFLFSTEEENVFVHSL 189
Query: 180 RARSCAILTGKN 191
R + A L N
Sbjct: 190 RQKYMATLVSVN 201
>gi|416822806|ref|ZP_11895133.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O55:H7 str. USDA 5905]
gi|320661180|gb|EFX28611.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O55:H7 str. USDA 5905]
Length = 361
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMVSGESQWITSPQARRDVQRL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|229104716|ref|ZP_04235378.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-28]
gi|228678780|gb|EEL32995.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-28]
Length = 379
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 119/192 (61%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +ALQ AK S +SPNP VG V+VK+ I+ G G HAE+ AL A G
Sbjct: 16 MRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEEHAEVHALHMA---GEKA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
N+TVY+TLEPCS+FG TPPC E LI+ G+K+++IA D NPLVSG G +L AGI V
Sbjct: 73 KNATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGKKKLEEAGIKVT 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N FF M+ P+V +K A SLD KT+ S+WIT +E+R D H +
Sbjct: 133 TGVLETEAVLLNRYFFHYMKTKRPFVTIKTAMSLDGKTATVTGESKWITGEEARADVHQY 192
Query: 180 RARSCAILTGKN 191
R AIL G N
Sbjct: 193 RHTHDAILVGVN 204
>gi|229174787|ref|ZP_04302310.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus MM3]
gi|228608695|gb|EEK65994.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus MM3]
Length = 379
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 118/192 (61%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +ALQ A+ S +SPNP VG V+VKE I+ G G HAE+ AL A G
Sbjct: 16 MRIALQLAEGTSGQTSPNPMVGAVVVKEGNIVGIGAHLRAGEEHAEVHALHMA---GEKA 72
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC E LIK G+K+V+IA D NPLVSG G +L AGI V
Sbjct: 73 KGATVYVTLEPCSHFGKTPPCCELLIKKGVKRVVIATLDCNPLVSGTGKRRLEEAGIEVA 132
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N FF M+ P+V +K A SLD KT+ S+WIT +E+R D H +
Sbjct: 133 TGVLETEATLLNRFFFHYMKTKRPFVTIKTAMSLDGKTATVTGESKWITGEEARADVHQY 192
Query: 180 RARSCAILTGKN 191
R AIL G N
Sbjct: 193 RHTHDAILVGVN 204
>gi|423457701|ref|ZP_17434498.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG5X2-1]
gi|401148085|gb|EJQ55578.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG5X2-1]
Length = 370
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 118/192 (61%), Gaps = 4/192 (2%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +ALQ A+ S +SPNP VG V+VKE I+ G G HAE+ AL A G
Sbjct: 7 MRIALQLAEGTSGQTSPNPMVGAVVVKEGNIVGIGAHLRAGEEHAEVHALHMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+TVY+TLEPCS+FG TPPC E LIK G+K+V+IA D NPLVSG G +L AGI V
Sbjct: 64 KGATVYVTLEPCSHFGKTPPCCELLIKKGVKRVVIATLDCNPLVSGTGKRRLEEAGIEVA 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
G+++ EA +N FF M+ P+V +K A SLD KT+ S+WIT +E+R D H +
Sbjct: 124 TGVLETEATLLNRFFFHYMKTKRPFVTIKTAMSLDGKTATVTGESKWITGEEARADVHQY 183
Query: 180 RARSCAILTGKN 191
R AIL G N
Sbjct: 184 RHTHDAILVGVN 195
>gi|416811845|ref|ZP_11890118.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O55:H7 str. 3256-97]
gi|416834980|ref|ZP_11901228.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O157:H7 str. LSU-61]
gi|420296207|ref|ZP_14798304.1| riboflavin biosynthesis protein RibD [Escherichia coli TW09109]
gi|424088219|ref|ZP_17824495.1| riboflavin biosynthesis protein RibD [Escherichia coli FRIK1996]
gi|424100840|ref|ZP_17836020.1| riboflavin biosynthesis protein RibD [Escherichia coli FRIK1990]
gi|424132048|ref|ZP_17864868.1| riboflavin biosynthesis protein RibD [Escherichia coli PA10]
gi|424266112|ref|ZP_17893786.1| riboflavin biosynthesis protein RibD [Escherichia coli PA28]
gi|424466354|ref|ZP_17916563.1| riboflavin biosynthesis protein RibD [Escherichia coli PA41]
gi|424478866|ref|ZP_17928129.1| riboflavin biosynthesis protein RibD [Escherichia coli TW07945]
gi|424484933|ref|ZP_17933818.1| riboflavin biosynthesis protein RibD [Escherichia coli TW09098]
gi|424491050|ref|ZP_17939469.1| riboflavin biosynthesis protein RibD [Escherichia coli TW09195]
gi|424510628|ref|ZP_17956885.1| riboflavin biosynthesis protein RibD [Escherichia coli TW14313]
gi|424524029|ref|ZP_17968071.1| riboflavin biosynthesis protein RibD [Escherichia coli EC4421]
gi|424567082|ref|ZP_18008015.1| riboflavin biosynthesis protein RibD [Escherichia coli EC4448]
gi|424579227|ref|ZP_18019176.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1863]
gi|425102036|ref|ZP_18504701.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.2239]
gi|425107838|ref|ZP_18510106.1| riboflavin biosynthesis protein RibD [Escherichia coli 6.0172]
gi|425141940|ref|ZP_18542247.1| riboflavin biosynthesis protein RibD [Escherichia coli 10.0869]
gi|425148258|ref|ZP_18548169.1| riboflavin biosynthesis protein RibD [Escherichia coli 88.0221]
gi|425184156|ref|ZP_18581795.1| riboflavin biosynthesis protein RibD [Escherichia coli FRIK1997]
gi|425321244|ref|ZP_18709932.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1737]
gi|425327435|ref|ZP_18715672.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1846]
gi|425333621|ref|ZP_18721355.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1847]
gi|425340044|ref|ZP_18727299.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1848]
gi|425390173|ref|ZP_18773643.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1868]
gi|425396292|ref|ZP_18779350.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1869]
gi|425415088|ref|ZP_18796738.1| riboflavin biosynthesis protein RibD [Escherichia coli FRIK523]
gi|428944892|ref|ZP_19017551.1| riboflavin biosynthesis protein RibD [Escherichia coli 88.1467]
gi|428969402|ref|ZP_19040044.1| riboflavin biosynthesis protein RibD [Escherichia coli 90.0039]
gi|428999763|ref|ZP_19068281.1| riboflavin biosynthesis protein RibD [Escherichia coli 95.0183]
gi|429018630|ref|ZP_19085423.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.0428]
gi|429042701|ref|ZP_19107715.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.0107]
gi|444929048|ref|ZP_21248203.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.0814]
gi|444956579|ref|ZP_21274582.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.1753]
gi|444961918|ref|ZP_21279673.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.1775]
gi|320656030|gb|EFX23946.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320665156|gb|EFX32249.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O157:H7 str. LSU-61]
gi|390650963|gb|EIN29330.1| riboflavin biosynthesis protein RibD [Escherichia coli FRIK1996]
gi|390673250|gb|EIN49498.1| riboflavin biosynthesis protein RibD [Escherichia coli FRIK1990]
gi|390708623|gb|EIN81838.1| riboflavin biosynthesis protein RibD [Escherichia coli PA10]
gi|390737230|gb|EIO08538.1| riboflavin biosynthesis protein RibD [Escherichia coli PA28]
gi|390776378|gb|EIO44324.1| riboflavin biosynthesis protein RibD [Escherichia coli PA41]
gi|390810339|gb|EIO77100.1| riboflavin biosynthesis protein RibD [Escherichia coli TW07945]
gi|390811979|gb|EIO78664.1| riboflavin biosynthesis protein RibD [Escherichia coli TW09109]
gi|390823148|gb|EIO89214.1| riboflavin biosynthesis protein RibD [Escherichia coli TW09098]
gi|390842531|gb|EIP06374.1| riboflavin biosynthesis protein RibD [Escherichia coli TW09195]
gi|390860208|gb|EIP22531.1| riboflavin biosynthesis protein RibD [Escherichia coli EC4421]
gi|390860609|gb|EIP22914.1| riboflavin biosynthesis protein RibD [Escherichia coli TW14313]
gi|390915444|gb|EIP73959.1| riboflavin biosynthesis protein RibD [Escherichia coli EC4448]
gi|390924994|gb|EIP82730.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1863]
gi|408116855|gb|EKH48122.1| riboflavin biosynthesis protein RibD [Escherichia coli FRIK1997]
gi|408253625|gb|EKI75216.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1737]
gi|408259754|gb|EKI80908.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1846]
gi|408268639|gb|EKI88989.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1847]
gi|408270205|gb|EKI90414.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1848]
gi|408318332|gb|EKJ34547.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1868]
gi|408331629|gb|EKJ46773.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1869]
gi|408350700|gb|EKJ64548.1| riboflavin biosynthesis protein RibD [Escherichia coli FRIK523]
gi|408558995|gb|EKK35338.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.2239]
gi|408560323|gb|EKK36587.1| riboflavin biosynthesis protein RibD [Escherichia coli 6.0172]
gi|408604530|gb|EKK78104.1| riboflavin biosynthesis protein RibD [Escherichia coli 10.0869]
gi|408611127|gb|EKK84489.1| riboflavin biosynthesis protein RibD [Escherichia coli 88.0221]
gi|427217740|gb|EKV86792.1| riboflavin biosynthesis protein RibD [Escherichia coli 88.1467]
gi|427234303|gb|EKW02002.1| riboflavin biosynthesis protein RibD [Escherichia coli 90.0039]
gi|427271036|gb|EKW35885.1| riboflavin biosynthesis protein RibD [Escherichia coli 95.0183]
gi|427286670|gb|EKW50508.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.0428]
gi|427311023|gb|EKW73243.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.0107]
gi|444542635|gb|ELV21985.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.0814]
gi|444582567|gb|ELV58353.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.1753]
gi|444585417|gb|ELV60992.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.1775]
Length = 361
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|256821696|ref|YP_003145659.1| riboflavin biosynthesis protein RibD [Kangiella koreensis DSM
16069]
gi|256795235|gb|ACV25891.1| riboflavin biosynthesis protein RibD [Kangiella koreensis DSM
16069]
Length = 372
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 114/173 (65%), Gaps = 3/173 (1%)
Query: 17 NPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSYFGY 76
NPRVGCV+VK+ II G+ + PG HAEI+AL +A G +T Y+TLEPC++ G
Sbjct: 28 NPRVGCVLVKDNIIIGEGWHEKPGFAHAEINALNHA---GESAKGATAYVTLEPCAHHGK 84
Query: 77 TPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIGFFS 136
T PC EAL+++G+ +V+ A+ DPNPLV+GKG+ L AGI + GLMQ +A +N GF
Sbjct: 85 TGPCAEALVEAGVARVVAAMLDPNPLVAGKGMKILEKAGIKTEYGLMQAQAETLNPGFIK 144
Query: 137 RMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
RM +G+P V K+ SLD +T++ SQWIT +R D RA S AI+TG
Sbjct: 145 RMTKGLPRVIAKVGMSLDGRTAMAIGESQWITGASARRDVQRLRAESGAIITG 197
>gi|345863043|ref|ZP_08815256.1| riboflavin biosynthesis protein RibD [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125926|gb|EGW55793.1| riboflavin biosynthesis protein RibD [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 341
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 23 VIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDVYNSTVYITLEPCSYFGYTPPCTE 82
++VK+ +++ G+ + G HAE +AL A G +T YITLEPC + G TPPC++
Sbjct: 1 MLVKDDQVVGEGWHRRAGEPHAERNALAQA---GERARGATAYITLEPCCHQGRTPPCSD 57
Query: 83 ALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVKQGLMQKEAYEINIGFFSRMQRGI 142
ALI++G+ +V+ A+ DPNPLV+GKG+AQL +AGI+ + GLMQ +A +N GF RM G
Sbjct: 58 ALIEAGVSRVVAAMRDPNPLVAGKGLAQLEAAGIATEYGLMQAQAEALNPGFTKRMAEGR 117
Query: 143 PWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIWRARSCAILTG 189
P++R K+A SLD +T++ + SQWITS+ +R D RARS AILTG
Sbjct: 118 PYIRCKLAMSLDGRTAMASGESQWITSEAARLDVQRLRARSSAILTG 164
>gi|386605633|ref|YP_006111933.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli UM146]
gi|419945582|ref|ZP_14462020.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli HM605]
gi|307628117|gb|ADN72421.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli UM146]
gi|388415185|gb|EIL75118.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli HM605]
Length = 361
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVQALRMA---GEKA 57
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 58 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVS 117
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 118 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 177
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 178 RAQSHAILT 186
>gi|301049614|ref|ZP_07196565.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 185-1]
gi|300298607|gb|EFJ54992.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 185-1]
Length = 367
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MTLALQQAKLS-INSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M AL+ A+ + PNP VGCVIVK+ I+ GY + G HAE+ AL A G
Sbjct: 7 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMA---GEKA 63
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
+T Y+TLEPCS+ G TPPC +ALI +G+ +V+ A+ DPNP V+G+G+ +L AGI V
Sbjct: 64 KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVS 123
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
GLM EA ++N GF RM+ G P++++K+ +SLD +T++ + SQWITS ++R D
Sbjct: 124 HGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRL 183
Query: 180 RARSCAILT 188
RA+S AILT
Sbjct: 184 RAQSHAILT 192
>gi|312623117|ref|YP_004024730.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203584|gb|ADQ46911.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
kronotskyensis 2002]
Length = 371
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Query: 1 MTLALQQAK-LSINSSPNPRVGCVIVKEKRIISCGYTKSPGGNHAEIDALLNAAAQGYDV 59
M +AL+ AK S PNPRVGCVIVK +I GY + G HAE+ A+ +A GY +
Sbjct: 10 MNMALELAKEASPLVLPNPRVGCVIVKNGTVIGKGYHQKYGEKHAEVLAIEDAIKNGYLL 69
Query: 60 YNSTVYITLEPCSYFGYTPPCTEALIKSGIKKVIIAINDPNPLVSGKGVAQLISAGISVK 119
NST+Y+TLEPC ++G PCTEA+IKSGIK+V+IA DPNPLV+GKG+ L G V
Sbjct: 70 KNSTMYVTLEPCCHYGKQLPCTEAIIKSGIKRVVIATKDPNPLVNGKGIQILKQHGTEVI 129
Query: 120 QGLMQKEAYEINIGFFSRMQRGIPWVRMKIASSLDNKTSLYNNSSQWITSKESRNDSHIW 179
+G++QKEA IN FF M+ GIP++ +K+A S+D K ++ +N ++E H
Sbjct: 130 EGVLQKEAESINKDFFKYMKTGIPYIAIKVAQSIDGKIAIPSNKRFLFNTEEENVFVHSL 189
Query: 180 RARSCAILTGKN 191
R + A L N
Sbjct: 190 RQKYMATLVSVN 201
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,992,238,051
Number of Sequences: 23463169
Number of extensions: 114926165
Number of successful extensions: 297021
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3746
Number of HSP's successfully gapped in prelim test: 4586
Number of HSP's that attempted gapping in prelim test: 285963
Number of HSP's gapped (non-prelim): 8568
length of query: 192
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 58
effective length of database: 9,215,130,721
effective search space: 534477581818
effective search space used: 534477581818
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)