Diaphorina citri psyllid: psy8196

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
MHRHIVLDIETTGLNIIDGHRIIEIGCVEIKNRQITGNNLHYYINPGRDSEKSALAIHGLTTKFLKNKLKFSEIVDNFLNYVSNSEIIIHNAAFDVGFLDMELSLLGYSNFTKYIYRITDTLLMARKIHTGKRNSLDALCDRYNISKIHRTLHGGLLDAELLAEVYLAMTRGQSNLNFKPKINNSNNIETKIKIPNNIPIKLANSNELVQHNMILSKIDKHSNGRCIWKK
ccEEEEEEEcccccccccccEEEEEEEEEEEccEEccccccccccccccccHHHHHHHcccHHHHcccccHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHHHcccccccccc
MHRHIVLDIETTGLNIIDGHRIIEIGCVEIKNRQITGNNLHYYINPGRDSEKSALAIHGLTTKFLKNKLKFSEIVDNFLNYVSNSEIIIHNAAFDVGFLDMELSLLGYSNFTKYIYRITDTLLMARKIHTGKRNSLDALCDRYNISKIHRTLHGGLLDAELLAEVYLAMTRGQSNLNFKPK*NNSNNIETKIKIPNNIPIKLANSNELVQHNMILSKIDKHSNGRCIWKK
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MHRHIVLDIETTGLNIIDGHRIIEIGCVEIKNRQITGNNLHYYINPGRDSEKSALAIHGLTTKFLKNKLKFSEIVDNFLNYVSNSEIIIHNAAFDVGFLDMELSLLGYSNFTKYIYRITDTLLMARKIHTGKRNSLDALCDRYNISKIHRTLHGGLLDAELLAEVYLAMTRGQSNLNFKPKINNSNNIETKIKIPNNIPIKLANSNELVQHNMILSKIDKHSNGRCIWKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DNA polymerase III subunit epsilon DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.confidentQ68W16
DNA polymerase III subunit epsilon DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.confidentQ9CPE0
DNA polymerase III subunit epsilon DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.confidentQ89AN3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0009360 [CC]DNA polymerase III complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0042575
GO:0045004 [BP]DNA replication proofreadingprobableGO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901576, GO:1901360, GO:0006139, GO:0051716, GO:0044260, GO:0071704, GO:0006260, GO:0006261, GO:0006281, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0009059, GO:0044763, GO:0008152, GO:0046483, GO:0045005, GO:0044238, GO:0044699, GO:0050896, GO:0009058, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0003887 [MF]DNA-directed DNA polymerase activityprobableGO:0016779, GO:0016772, GO:0034061, GO:0003824, GO:0016740, GO:0003674

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.7.-Nucleotidyltransferases.probable
2.7.7.7DNA-directed DNA polymerase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2GUI, chain A
Confidence level:very confident
Coverage over the Query: 2-171
View the alignment between query and template
View the model in PyMOL